RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDGFRB (Homo sapiens)

Ensembl gene IDs: ENSG00000113721

Ensembl transcript IDs: ENST00000261799.9, ENST00000517488.1, ENST00000517660.1, ENST00000517957.1, ENST00000520229.1, ENST00000520579.5, ENST00000522466.1, ENST00000523456.1

Found 603 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGGGGGAGCCCAACGGGCAGAGCATTGCTGTAGAGCTCCGCGCTaGGCGGGCGGCGCTTGTCGGAGTGGTGCTGCAGGAAGGTGTGTT +
Preference number: 1 (lower is better)
Translates to: AGGAQRAEHCCRAPR*AGGACRSGAAGRCV
Trigger: AACACACCTTCCTGCAGCACCACTCCGACAAGCGCCGCCCGCCCAGCGCGGAGCTCTACAGCAATGCTCTGCCCGTTGGGCTCCCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp GGCAACTGTTCCAGCTCTGGCTCCGGCTCCACCTGGAGCTCAAGCTaGGGCTCTGGCTCTGGTTCGTCCTGGGGCTCCAGGGGGCTGTCA +
Preference number: 1 (lower is better)
Translates to: GNCSSSGSGSTWSSS*GSGSGSSWGSRGLS
Trigger: TGACAGCCCCCTGGAGCCCCAGGACGAACCAGAGCCAGAGCCCCAGCTTGAGCTCCAGGTGGAGCCGGAGCCAGAGCTGGAACAGTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp GCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTaGAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: ALRSVQRTDSGRSTC*RRSVLTTSNSCSSS
Trigger: GGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp CGTGTCCTGGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTaGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAA +
Preference number: 1 (lower is better)
Translates to: RVLAHSVAQRAAHRQ*PIHVLQTQCAHHLK
Trigger: TTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp GGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTaGGTGTGCTCCAAGTGCCCTGGGCAAGGGCTGCAGGCTGGGGGT +
Preference number: 1 (lower is better)
Translates to: GLMGLKDRDTGTCYG*VCSKCPGQGLQAGG
Trigger: ACCCCCAGCCTGCAGCCCTTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 90 bp ACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTaGTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: TALRSVQRTDSGRST*CRRSVLTTSNSCSS
Trigger: GGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp ACCACCACCTTAAAGGGCAAGGAGTGTGGCACCACGATGACCTCCTaGGTGTCCTGGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGAC +
Preference number: 1 (lower is better)
Translates to: TTTLKGKECGTTMTS*VSWPTALRSVQRTD
Trigger: GTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGGTCATCGTGGTGCCACACTCCTTGCCCTTTAAGGTGGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp CAGGGACACAGGCACTTGCTATGGCTGCGTGTGCTCCAAGTGCCCTaGGCAAGGGCTGCAGGCTGGGGGTGTCCTGTACTTGGCTCAGCC +
Preference number: 1 (lower is better)
Translates to: QGHRHLLWLRVLQVP*ARAAGWGCPVLGSA
Trigger: GGCTGAGCCAAGTACAGGACACCCCCAGCCTGCAGCCCTTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp CCCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATaGCTGCGTGTGCTCCAAGTGCCCTGGGCAAGGGCTGCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: PRTDGPEGQGHRHLL*LRVLQVPWARAAGW
Trigger: CCAGCCTGCAGCCCTTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp TTAAAGGGCAAGGAGTGTGGCACCACGATGACCTCCTGCGTGTCCTaGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGA +
Preference number: 1 (lower is better)
Translates to: LKGKECGTTMTSCVS*PTALRSVQRTDSGR
Trigger: TCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGGTCATCGTGGTGCCACACTCCTTGCCCTTTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp GGCTCCACCTGGAGCTCAAGCTGGGGCTCTGGCTCTGGTTCGTCCTaGGGCTCCAGGGGGCTGTCACAGGAGATGGTTGAGGAGGTGTTG +
Preference number: 1 (lower is better)
Translates to: GSTWSSSWGSGSGSS*GSRGLSQEMVEEVL
Trigger: CAACACCTCCTCAACCATCTCCTGTGACAGCCCCCTGGAGCCCCAGGACGAACCAGAGCCAGAGCCCCAGCTTGAGCTCCAGGTGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp GCGGGCGGCGCTTGTCGGAGTGGTGCTGCAGGAAGGTGTGTTTGTTaGGGTGCAGGTAGTCCACCAGGTCTCCGTAGCGGCAGTACTCAG +
Preference number: 1 (lower is better)
Translates to: AGGACRSGAAGRCVC*GAGSPPGLRSGSTQ
Trigger: CTGAGTACTGCCGCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTGCAGCACCACTCCGACAAGCGCCGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp GTCGCCCAGGGTGCGGTTGTCTTTGAACCACAGGACAGTGGGCGGTaGGTAGGCCTCGAACACTACCTGCAGTGTCCGGCTCCGATGCAG +
Preference number: 1 (lower is better)
Translates to: VAQGAVVFEPQDSGR*VGLEHYLQCPAPMQ
Trigger: CTGCATCGGAGCCGGACACTGCAGGTAGTGTTCGAGGCCTACCCACCGCCCACTGTCCTGTGGTTCAAAGACAACCGCACCCTGGGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp GTGTCCAGGGGAGATCGGAGGCCATGGAACCCAGGCAAGCGGGCCTaGGACCGAAGGATGGCTGGGTGGTCACTCCTCAGAAACTCCTCA +
Preference number: 1 (lower is better)
Translates to: VSRGDRRPWNPGKRA*DRRMAGWSLLRNSS
Trigger: TGAGGAGTTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGGGTTCCATGGCCTCCGATCTCCCCTGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp CGTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTaGTGTCCAGGGGAGATCGGAGGCCATGGAACCCAGGCAAGCGGG +
Preference number: 1 (lower is better)
Translates to: RCHPHWAARQYRGRS*CPGEIGGHGTQASG
Trigger: CCCGCTTGCCTGGGTTCCATGGCCTCCGATCTCCCCTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp AAAGCCCCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTaGTATGGCTGCGTGTGCTCCAAGTGCCCTGGGCAAGGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: KAPGLMGLKDRDTGT*YGCVCSKCPGQGLQ
Trigger: CTGCAGCCCTTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGGGGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 90 bp CTACCTGCAGTGTCCGGCTCCGATGCAGCTCAGCAAATTGTAGTGTaGCCACCTCTCCCAGGAGCCGCACGTAGCCGCTCTCAACCACGG +
Preference number: 1 (lower is better)
Translates to: LPAVSGSDAAQQIVV*PPLPGAARSRSQPR
Trigger: CCGTGGTTGAGAGCGGCTACGTGCGGCTCCTGGGAGAGGTGGGCACACTACAATTTGCTGAGCTGCATCGGAGCCGGACACTGCAGGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp TGCAGCGCACCGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTaGTCACCACCTCAAACTCCTGCTCCTCCTCCCAGTACGTCACGT +
Preference number: 1 (lower is better)
Translates to: CSAPTVADPRAADAV*SPPQTPAPPPSTSR
Trigger: ACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp CAGGAGCAGAAAGCTTCCAGAAGGGGACAGCTGATAAGGGCAGCCTaGCTGACAGGAAGCCCGGTCAGGCCAGGCCAGGAGATGCTGGGT +
Preference number: 1 (lower is better)
Translates to: QEQKASRRGQLIRAA*LTGSPVRPGQEMLG
Trigger: ACCCAGCATCTCCTGGCCTGGCCTGACCGGGCTTCCTGTCAGCCAGGCTGCCCTTATCAGCTGTCCCCTTCTGGAAGCTTTCTGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp ATCGGAGGCCATGGAACCCAGGCAAGCGGGCCTGGGACCGAAGGATaGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGT +
Preference number: 1 (lower is better)
Translates to: IGGHGTQASGPGTEG*LGGHSSETPHPPAG
Trigger: ACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGGGTTCCATGGCCTCCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp GGTAGTGAAAGAGGTCCCGTGGTCTTCCCATGTCCCTGGGGCAGCTaGTGGGGGCTTTCCAGGACACCGGCTGTCACTCTAAGTCAAGGC +
Preference number: 1 (lower is better)
Translates to: GSERGPVVFPCPWGS*WGLSRTPAVTLSQG
Trigger: GCCTTGACTTAGAGTGACAGCCGGTGTCCTGGAAAGCCCCCAGCAGCTGCCCCAGGGACATGGGAAGACCACGGGACCTCTTTCACTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp AGTGAAAGAGGTCCCGTGGTCTTCCCATGTCCCTGGGGCAGCTGCTaGGGGCTTTCCAGGACACCGGCTGTCACTCTAAGTCAAGGCCTG +
Preference number: 1 (lower is better)
Translates to: SERGPVVFPCPWGSC*GLSRTPAVTLSQGL
Trigger: CAGGCCTTGACTTAGAGTGACAGCCGGTGTCCTGGAAAGCCCCCAGCAGCTGCCCCAGGGACATGGGAAGACCACGGGACCTCTTTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp GTCATCGTGGGTAGTGAAAGAGGTCCCGTGGTCTTCCCATGTCCCTaGGGCAGCTGCTGGGGGCTTTCCAGGACACCGGCTGTCACTCTA +
Preference number: 1 (lower is better)
Translates to: VIVGSERGPVVFPCP*GSCWGLSRTPAVTL
Trigger: TAGAGTGACAGCCGGTGTCCTGGAAAGCCCCCAGCAGCTGCCCCAGGGACATGGGAAGACCACGGGACCTCTTTCACTACCCACGATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp GCTGGAAGGAGAGCTGGACCTCAGCATCCTCATGGAAGGCCCGCATaGTGTAGTGGCCAGCCTCTGCCACCTTCACGCGAACCAGTGTCA +
Preference number: 1 (lower is better)
Translates to: AGRRAGPQHPHGRPA*CSGQPLPPSREPVS
Trigger: TGACACTGGTTCGCGTGAAGGTGGCAGAGGCTGGCCACTACACCATGCGGGCCTTCCATGAGGATGCTGAGGTCCAGCTCTCCTTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp TCAAACTCCTGCTCCTCCTCCCAGTACGTCACGTTAGTCTCCAGCTaGCTCTCCTCTTCGGAACTGTTCCCCAGCAGCGTGGGCGGCAGC +
Preference number: 1 (lower is better)
Translates to: SNSCSSSQYVTLVSS*LSSSELFPSSVGGS
Trigger: GCTGCCGCCCACGCTGCTGGGGAACAGTTCCGAAGAGGAGAGCCAGCTGGAGACTAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp GAGGCCATGGAACCCAGGCAAGCGGGCCTGGGACCGAAGGATGGCTaGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTT +
Preference number: 1 (lower is better)
Translates to: EAMEPRQAGLGPKDG*VVTPQKLLIHLLVL
Trigger: AAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGGGTTCCATGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp TCGGCACAGGTGCTGGAGTGGTGGGCTGCAGGAGGTGATCTCATTTaGCCTCTTTGTCCCTTTTGCCCAGGATACCCCCGGAGGTCATCG +
Preference number: 1 (lower is better)
Translates to: SAQVLEWWAAGGDLI*PLCPFCPGYPRRSS
Trigger: CGATGACCTCCGGGGGTATCCTGGGCAAAAGGGACAAAGAGGGCAAATGAGATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 90 bp TCCTTGGACCAACTCTGGGGATCCCAGGGAAGTAAGGTGCCAACCTaGAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCC +
Preference number: 1 (lower is better)
Translates to: SLDQLWGSQGSKVPT*NAGLVPRGVELPAP
Trigger: GGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGCAGGTTGGCACCTTACTTCCCTGGGATCCCCAGAGTTGGTCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 90 bp CGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTaGTCCTCCTCCCAGTACGTCACGTTAGTCTCCAGCTGGCTCTCC +
Preference number: 1 (lower is better)
Translates to: RSTCCRRSVLTTSNS*SSSQYVTLVSSWLS
Trigger: GGAGAGCCAGCTGGAGACTAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp CTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTaGCATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACA +
Preference number: 1 (lower is better)
Translates to: LPNGPRPARARERRD*HHREETGFLLDEAT
Trigger: TGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGATGCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp ATGCCCCGGCCACGACAGCGGACTGTCTGTTCCCCACTGTCAGGGTaGCTCTCACTTAGCTCCAGCACTCGGACAGGGACATTGATCTGT +
Preference number: 1 (lower is better)
Translates to: MPRPRQRTVCSPLSG*LSLSSSTRTGTLIC
Trigger: ACAGATCAATGTCCCTGTCCGAGTGCTGGAGCTAAGTGAGAGCCACCCTGACAGTGGGGAACAGACAGTCCGCTGTCGTGGCCGGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR TCA 90 bp TCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTaGTGGCATTGTAGAACTGCTCGTTCATGGGCAGCTCTGGGTAAG +
Preference number: 1 (lower is better)
Translates to: SRRRHGQAGPCGNPV*WHCRTARSWAALGK
Trigger: CTTACCCAGAGCTGCCCATGAACGAGCAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR TCA 90 bp GTGGGCCCTCGTCAGCAACCTCGGGTTTGGGGTCAGGCAGGGGGATaGTATAGTCGTTGTCACCCTCATTGGGCTGCACGGCAGTATAGA +
Preference number: 1 (lower is better)
Translates to: VGPRQQPRVWGQAGG*YSRCHPHWAARQYR
Trigger: TCTATACTGCCGTGCAGCCCAATGAGGGTGACAACGACTATATCATCCCCCTGCCTGACCCCAAACCCGAGGTTGCTGACGAGGGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp GGGAACGCAGGGACTGGCATCATAGGGAGGAGACTGGCTTTCTTCTaGATGAGGCAACACTGCTCAAGGCTAGGCCCTAGCTCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: GNAGTGIIGRRLAFF*MRQHCSRLGPSSAS
Trigger: GCTGGCTGAGCTAGGGCCTAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGATGCCAGTCCCTGCGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp CCATGGAACCCAGGCAAGCGGGCCTGGGACCGAAGGATGGCTGGGTaGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTT +
Preference number: 1 (lower is better)
Translates to: PWNPGKRAWDRRMAG*SLLRNSSSTCWYFF
Trigger: AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGGGTTCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp CCTCACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTaGAGTGGTGGGCTGCAGGAGGTGATCTCATTTGCCCTCTTTGTC +
Preference number: 1 (lower is better)
Translates to: PHCPFCLRRRPRHRC*SGGLQEVISFALFV
Trigger: GACAAAGAGGGCAAATGAGATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 90 bp TGGTGGGCTGCAGGAGGTGATCTCATTTGCCCTCTTTGTCCCTTTTaGCCAGGATACCCCCGGAGGTCATCGTGGGTAGTGAAAGAGGTC +
Preference number: 1 (lower is better)
Translates to: WWAAGGDLICPLCPF*PGYPRRSSWVVKEV
Trigger: GACCTCTTTCACTACCCACGATGACCTCCGGGGGTATCCTGGGCAAAAGGGACAAAGAGGGCAAATGAGATCACCTCCTGCAGCCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 90 bp TGTCCTCACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTaGTGGAGTGGTGGGCTGCAGGAGGTGATCTCATTTGCCCTCTTT +
Preference number: 1 (lower is better)
Translates to: CPHCPFCLRRRPRHR*WSGGLQEVISFALF
Trigger: AAAGAGGGCAAATGAGATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTGAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTaGGCTGCAGGAGGTGATCTCATTTGCCCTCTTTGTCCCTTTTGC +
Preference number: 1 (lower is better)
Translates to: SILSSTQTSAQVLEW*AAGGDLICPLCPFC
Trigger: GCAAAAGGGACAAAGAGGGCAAATGAGATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 90 bp CTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTaGTGGGCTGCAGGAGGTGATCTCATTTGCCCTCTTTGTCCCTTT +
Preference number: 1 (lower is better)
Translates to: LSILSSTQTSAQVLE*WAAGGDLICPLCPF
Trigger: AAAGGGACAAAGAGGGCAAATGAGATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR TCA 90 bp GATGATAAGGGAGATGATGGTGAGCACCACCAGGGCCAGGATGGCTaGGATCACCACCACCTTAAAGGGCAAGGAGTGTGGCACCACGAT +
Preference number: 1 (lower is better)
Translates to: DDKGDDGEHHQGQDG*DHHHLKGQGVWHHD
Trigger: ATCGTGGTGCCACACTCCTTGCCCTTTAAGGTGGTGGTGATCTCAGCCATCCTGGCCCTGGTGGTGCTCACCATCATCTCCCTTATCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp TGTAGGTCCCCGAGTCTTCTAACTCGGCACTGGGGATGTGCAGGATaGAGCGGATGTGGTAAGGCATATCCAAGAGGAAGTCAGTCACCG +
Preference number: 1 (lower is better)
Translates to: CRSPSLLTRHWGCAG*SGCGKAYPRGSQSP
Trigger: CGGTGACTGACTTCCTCTTGGATATGCCTTACCACATCCGCTCCATCCTGCACATCCCCAGTGCCGAGTTAGAAGACTCGGGGACCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 90 bp TTTGGTACCGTATTGAGAACCCACTCTCCCTCCTTGGACCAACTCTaGGGATCCCAGGGAAGTAAGGTGCCAACCTGCAATGCAGGGTTG +
Preference number: 1 (lower is better)
Translates to: FGTVLRTHSPSLDQL*GSQGSKVPTCNAGL
Trigger: CAACCCTGCATTGCAGGTTGGCACCTTACTTCCCTGGGATCCCCAGAGTTGGTCCAAGGAGGGAGAGTGGGTTCTCAATACGGTACCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR TCA 90 bp TATCGTAAGGGGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTaGCGTCTCCTTTCATGTCCAGCATGGGCACATAGTCCACCGACT +
Preference number: 1 (lower is better)
Translates to: YRKGPCSWRTRCLHI*RLLSCPAWAHSPPT
Trigger: AGTCGGTGGACTATGTGCCCATGCTGGACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCCCCTTACGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp AACGTAGTTATCGTAAGGGGCCATGTAGTTGGAGGACTCGATGTCTaGATATTTGACGTCTCCTTTCATGTCCAGCATGGGCACATAGTC +
Preference number: 1 (lower is better)
Translates to: NVVIVRGHVVGGLDV*IFDVSFHVQHGHIV
Trigger: GACTATGTGCCCATGCTGGACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCCCCTTACGATAACTACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 90 bp GGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTaGAACCACCTGGAATACTCTAGAATGTTAGTGCTGGCAAGGCAC +
Preference number: 1 (lower is better)
Translates to: GWKFRVYGLASSGQM*NHLEYSRMLVLARH
Trigger: GTGCCTTGCCAGCACTAACATTCTAGAGTATTCCAGGTGGTTGCACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR GCA 90 bp GCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCTGGCTCCGGCCCTGGCCCACAGCGTTaGGCAGCGTGCAGCGCACCG +
Preference number: 2 (lower is better)
Translates to: ARGAGHPESGNCSSSGSGPGPQR*AACSAP
Trigger: CGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGG...GCCGGAGCCAGAGCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp TCCTCTGCTTCCGCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTGTTCGGCTGGGGCATaGCCCGGCCACGACAGCGGA +
Preference number: 2 (lower is better)
Translates to: SSASARGAGHPESGNCSSCSAGA*PGHDSG
Trigger: TCCGCTGTCGTGGCCGGGGCATGCCCCAGCCGAACA...GCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGCGGAAGCAGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CAA 90 bp GAGTGTGGCACCACGATGACCTCCTGCGTGTCCTGGCCCACAGCGTaGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTGC +
Preference number: 2 (lower is better)
Translates to: ECGTTMTSCVSWPTA*RSVQRTDSGRSTCC
Trigger: GCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGGTCATCGTGGTGCCACACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp GCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCTGGCTCCGGCGTAGTGGCCAGCCTCTaGCACCTTCACGCGAACCAG +
Preference number: 2 (lower is better)
Translates to: ARGAGHPESGNCSSSGSGVVASL*HLHANQ
Trigger: CTGGTTCGCGTGAAGGTGGCAGAGGCTGGCCACTAC...GCCGGAGCCAGAGCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR TCA 90 bp TCCTCTGCTTCCGCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCAGTGTGGCACCACGATaGCCTCCTGCGTGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: SSASARGAGHPESGNCSSSVAPR*PPACPG
Trigger: GCCAGGACACGCAGGAGGTCATCGTGGTGCCACACT...GCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGCGGAAGCAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp GCGTGTCCTGGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCAGGACAGTGGGCGGTaGGTAGGCCTCGAACACTAC +
Preference number: 2 (lower is better)
Translates to: ACPGPQRCAACSAPTVADQDSGR*VGLEHY
Trigger: GTAGTGTTCGAGGCCTACCCACCGCCCACTGTCCTG...ATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp GCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCGGCACTGGGGATGTaGAGGATGGAGCGGATGTGG +
Preference number: 2 (lower is better)
Translates to: AACSAPTVADPRAADAVCSALGM*RMERMW
Trigger: CCACATCCGCTCCATCCTGCACATCCCCAGTGCCGA...GCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACGCGCTGCCTCAGGGATaGGGCAGCTGGTGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNALPQG*GSWWVR
Trigger: CCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp GCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGGGGAGATCGGAGGCCATCCAGGCAAGCGGGCCTaGGACCGAAGGATGGCTGGG +
Preference number: 2 (lower is better)
Translates to: AARQYRGRSWCPGEIGGHPGKRA*DRRMAG
Trigger: CCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGG...ATGGCCTCCGATCTCCCCTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp GTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGTGTAGAGCTCCGCGCTaGGCGGGCGGCGCTTGTCGG +
Preference number: 2 (lower is better)
Translates to: VVTLIGLHGSIEDGAGVQCRAPR*AGGACR
Trigger: CCGACAAGCGCCGCCCGCCCAGCGCGGAGCTCTACA...CTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp TCCTCTGCTTCCGCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCCGCTTGTCGGAGTGGTaGTGCAGGAAGGTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: SSASARGAGHPESGNCSSRLSEW*CRKVCL
Trigger: CAAACACACCTTCCTGCAGCACCACTCCGACAAGCG...GCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGCGGAAGCAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCAGGGAACGCAGGGACTaGCATCATAGGGAGGAGACT +
Preference number: 2 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRRERRD*HHREET
Trigger: AGTCTCCTCCCTATGATGCCAGTCCCTGCGTTCCCT...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAGTGCTCCAAGTGCCCTaGGCAAGGGCTGCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SILSSTQTSAQVLEWWAAVLQVP*ARAAGW
Trigger: CCAGCCTGCAGCCCTTGCCCAGGGCACTTGGAGCAC...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCACAGGCACTTGCTATaGCTGCGTGTGCTCCAAGTG +
Preference number: 2 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRHRHLL*LRVLQV
Trigger: CACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTG...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR TCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACGTGCAGCTGTGTTCTTaGGACTTGCTGGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNVQLCS*DLLGAW
Trigger: CCAGGCCCCCAGCAAGTCTCAAGAACACAGCTGCAC...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR GCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCATGCGTGTGCTCCAAGTaGCCTGGGCAAGGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: SILSSTQTSAQVLEWWAACVCSK*PGQGLQ
Trigger: CTGCAGCCCTTGCCCAGGGCACTTGGAGCACACGCA...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR GCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTCCTCTTTGTCCCTTTTaGCCAGGATACCCCCGGAGG +
Preference number: 2 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSPLCPF*PGYPRR
Trigger: CCTCCGGGGGTATCCTGGGCAAAAGGGACAAAGAGG...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR GCA 90 bp AGCCGAGGGTGCGTCCCAGCACAAGCTGGTCCCGCGGCAGCTCCCACGTGGAGTAGTGTCCGGCTCCGATaGAGCTCAGCAAATTGTAGT +
Preference number: 2 (lower is better)
Translates to: SRGCVPAQAGPAAAPTWSSVRLR*SSANCS
Trigger: ACTACAATTTGCTGAGCTGCATCGGAGCCGGACACT...ACTCCACGTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACGCACCCTCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp GTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGCGATTTCGCCAGCGCTaGAGTCGCCCAGGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: VVTLIGLHGSIEDGAGVQRFRQR*SRPGCG
Trigger: ACCGCACCCTGGGCGACTCCAGCGCTGGCGAAATCG...CTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CAA 90 bp AAAAGCCCCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTaGCTATGGCTGCGTGTGCTCCAAGTGCCCTGGGCAAGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: KSPRTDGPEGQGHRH*LWLRVLQVPWARAA
Trigger: TGCAGCCCTTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGGGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR TCA 90 bp CGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAGTCGCCCAGGGTATGTCCACTCGAAGTTaGCCACCTCATTCCCGATCA +
Preference number: 2 (lower is better)
Translates to: RHVARGQGDFASAGVAQGMSTRS*PPHSRS
Trigger: TGATCGGGAATGAGGTGGTCAACTTCGAGTGGACAT...ACCCTGGGCGACTCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTTGGATGAGGCAACACTaGTCAAGGCTAGGCCCTAGC +
Preference number: 2 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSWMRQH*SRLGPS
Trigger: GCTAGGGCCTAGCCTTGAGCAGTGTTGCCTCATCCA...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR GCA 90 bp AGGCTGGGGGAACCCTCCAGTGGGCCCTCGTCAGCAACCTCGGGTTTGGGGTCACTCGTTGATCAAAGTTaGTCGGCAGGTCCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: RLGEPSSGPSSATSGLGSLVDQS*SAGPLR
Trigger: CCTGAGAGGACCTGCCGAGCAACTTTGATCAACGAG...TGACCCCAAACCCGAGGTTGCTGACGAGGGCCCACTGGAGGGTTCCCCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACACTGGCACACACACGTaGCCACTCCACACTGGCACA +
Preference number: 2 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNTGTHT*PLHTGT
Trigger: TGTGCCAGTGTGGAGTGGCCACGTGTGTGTGCCAGT...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp CTTGCTCATGTCCATGTAGCCACCGTCGCTCTCCCCGGTCAAGGACACATGGCTCAGATGATGTTCGGCTaGGGCATGCCCCGGCCACGA +
Preference number: 2 (lower is better)
Translates to: LAHVHVATVALPGQGHMAQMMFG*GMPRPR
Trigger: TCGTGGCCGGGGCATGCCCCAGCCGAACATCATCTG...AGCCATGTGTCCTTGACCGGGGAGAGCGACGGTGGCTACATGGACATGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp ATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATTCAAGGACACATGGCTaGGCAGGGGGAGCCCAACGG +
Preference number: 2 (lower is better)
Translates to: IDLVGGMGRLGHAVTPFDSRTHG*AGGAQR
Trigger: CCGTTGGGCTCCCCCTGCCCAGCCATGTGTCCTTGA...ATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR TCA 90 bp ATCCTCATGGAAGGCCCGCATGGTGTAGTGGCCAGCCTCTGCCACCTTCACGCGAACCAGTGTCAGCTCTaGCACATACCGGGTCTCCGA +
Preference number: 2 (lower is better)
Translates to: ILMEGPHGVVASLCHLHANQCQL*HIPGLR
Trigger: TCGGAGACCCGGTATGTGTCAGAGCTGACACTGGTT...CGCGTGAAGGTGGCAGAGGCTGGCCACTACACCATGCGGGCCTTCCATGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp CAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCGGCAGCCTCGAACACTACCTaGAGTGTCCGGCTCCGATGC +
Preference number: 2 (lower is better)
Translates to: QEGVFVAVQVVHQVSVAAASNTT*SVRLRC
Trigger: GCATCGGAGCCGGACACTGCAGGTAGTGTTCGAGGC...TGCCGCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp ATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCGGGTCTCCGACACGTTaGGCGTGGACAGGGCGATTT +
Preference number: 2 (lower is better)
Translates to: IHVLQTQCAHHLKLLLLLGSPTR*AWTGRF
Trigger: AAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCC...GAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp CGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCCCAGTACGTCACGTTACCGACACGTTGCGCGTaGACAGGGCGATTTCGCCAG +
Preference number: 2 (lower is better)
Translates to: RSVLTTSNSCSSSQYVTLPTRCA*TGRFRQ
Trigger: CTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGG...TAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp ATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCCATGGAAGGCCCGCATaGTGTAGTGGCCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: IHVLQTQCAHHLKLLLLLHGRPA*CSGQPL
Trigger: CAGAGGCTGGCCACTACACCATGCGGGCCTTCCATG...GAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp ATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATTCCCCACTGTCAGGGTaGCTCTCACTTAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: IDLVGGMGRLGHAVTPFDSPLSG*LSLSSS
Trigger: GCTGGAGCTAAGTGAGAGCCACCCTGACAGTGGGGA...ATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTCGTCCCAGCACAAGCTaGTCCCGCGGCAGCTCCCAC +
Preference number: 2 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMARPSTS*SRGSSH
Trigger: GTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACG...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR TCA 90 bp CGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCCCAGTACGTCACGTTACACGTGGACACCTTTTaGGGTCTCTGCAGGCAGACC +
Preference number: 2 (lower is better)
Translates to: RSVLTTSNSCSSSQYVTLHVDTF*GLCRQT
Trigger: GGTCTGCCTGCAGAGACCTCAAAAGGTGTCCACGTG...TAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGTCCCTAGCTCCTGGGTaGATAAAAGTGCGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGSLAPG*IKVRGE
Trigger: CTCTCCTCGCACTTTTATCCACCCAGGAGCTAGGGA...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp ATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCTGGGGATGTGCAGGATaGAGCGGATGTGGTAAGGCA +
Preference number: 2 (lower is better)
Translates to: IHVLQTQCAHHLKLLLLLWGCAG*SGCGKA
Trigger: TGCCTTACCACATCCGCTCCATCCTGCACATCCCCA...GAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTACCTCCTGCGTGTCCTaGCCCACAGCGTTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFTSCVS*PTALRS
Trigger: GCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGGT...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp ATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATAGAACTGCTCGTTCATaGGCAGCTCTGGGTAAGGGG +
Preference number: 2 (lower is better)
Translates to: IDLVGGMGRLGHAVTPFDRTARS*AALGKG
Trigger: CCCCTTACCCAGAGCTGCCCATGAACGAGCAGTTCT...ATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR TCA 90 bp GGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGCTCGTTAATTCGAGTCCCGCATaGTGTCTCGAGCCAGGCCAA +
Preference number: 2 (lower is better)
Translates to: GRLGHAVTPFDGIVELLVNSSPA*CLEPGQ
Trigger: TTGGCCTGGCTCGAGACATCATGCGGGACTCGAATT...AACGAGCAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTGGCCGATCCACGTGCTaGAGACGCAGTGTGCTCACC +
Preference number: 2 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFGRSTC*RRSVLT
Trigger: GGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCC...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp TATAGTCGTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGGTTCATGGGCAGCTCTaGGTAAGGGGTGCCACCCAA +
Preference number: 2 (lower is better)
Translates to: YSRCHPHWAARQYRGRSWVHGQL*VRGATQ
Trigger: TTGGGTGGCACCCCTTACCCAGAGCTGCCCATGAAC...CCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAACGACTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR TCA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTGGGTGCGGTTGTCTTTaGACCACAGGACAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFGCGCL*TTGQWA
Trigger: CGCCCACTGTCCTGTGGTTCAAAGACAACCGCACCC...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp GCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGGGGAGATCGGAGGCCATGGAGGACTCGATGTCTaGATATTTGACGTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: AARQYRGRSWCPGEIGGHGGLDV*IFDVSF
Trigger: AAAGGAGACGTCAAATATGCAGACATCGAGTCCTCC...ATGGCCTCCGATCTCCCCTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGAGACTGGCTTTCTTCTaGATGAGGCAACACTGCTCA +
Preference number: 2 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGRLAFF*MRQHCS
Trigger: TGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCT...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACCTAGACTCTGGTGGATaGATTAAGACTGAGGGTGAT +
Preference number: 2 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNLDSGG*IKTEGD
Trigger: ATCACCCTCAGTCTTAATCCATCCACCAGAGTCTAG...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp TCGGATCTCGTAACGTGGCTTCTTCTGCCAAAGCATGATGAGGATGATAAGGGATGTTCCCCAGCAGCGTaGGCGGCAGCTCACGTGGAC +
Preference number: 2 (lower is better)
Translates to: SDLVTWLLLPKHDEDDKGCSPAA*AAAHVD
Trigger: GTCCACGTGAGCTGCCGCCCACGCTGCTGGGGAACA...TCCCTTATCATCCTCATCATGCTTTGGCAGAAGAAGCCACGTTACGAGATCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTCCACCAGGGCCAGGATaGCTGAGATCACCACCACCT +
Preference number: 2 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFPPGPG*LRSPPP
Trigger: AGGTGGTGGTGATCTCAGCCATCCTGGCCCTGGTGG...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CAA 90 bp TCCACCAGCCGCCCACTTTCTTTGCGGGGGTATGTCCACTCGAAGTaGACCACCTCATTCCCGATCACAATGCACATGAGGGTGATGTTC +
Preference number: 2 (lower is better)
Translates to: STSRPLSLRGYVHSK*TTSFPITMHMRVMF
Trigger: GAACATCACCCTCATGTGCATTGTGATCGGGAATGAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAGTGGGCGGCTGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR TCA 90 bp GCATGGGGTCCACGTAGATGTACTCATGGCCGTCAGAGCTCACAGACTCAATCACAGGGCCAGGATGGCTaGGATCACCACCACCTTAAA +
Preference number: 2 (lower is better)
Translates to: AWGPRRCTHGRQSSQTQSQGQDG*DHHHLK
Trigger: TTTAAGGTGGTGGTGATCTCAGCCATCCTGGCCCTG...TGATTGAGTCTGTGAGCTCTGACGGCCATGAGTACATCTACGTGGACCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp AGCTCCGACATAAGGGCTTGCTTCTCACTGCTGCGGGCTGTGGATTTAAGCATCACCACCTCAAACTCCTaGTCCTCCTCCCAGTACGTC +
Preference number: 2 (lower is better)
Translates to: SSDIRACFSLLRAVDLSITTSNS*SSSQYV
Trigger: GACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGT...GATGCTTAAATCCACAGCCCGCAGCAGTGAGAAGCAAGCCCTTATGTCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTACTGATAAGGGCAGCCTaGCTGACAGGAAGCCCGGTC +
Preference number: 2 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLLIRAA*LTGSPV
Trigger: GACCGGGCTTCCTGTCAGCCAGGCTGCCCTTATCAG...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTGTCAGTTGGCCTCCCTaGAGGCAGAGGGCTGGTCAC +
Preference number: 2 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCVSWPP*RQRAGH
Trigger: GTGACCAGCCCTCTGCCTCCAGGGAGGCCAACTGAC...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp GCTGCAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCACATTGATCTGTAGCTaGAAGGAGAGCTGGACCTCA +
Preference number: 2 (lower is better)
Translates to: AAGRCVCCGAGSPPGLRSTLICS*KESWTS
Trigger: TGAGGTCCAGCTCTCCTTCCAGCTACAGATCAATGT...GCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR TCA 90 bp GGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTCATGTCTGCAGGCAGACCAGATaGTGTTCGGCTGGGGCATGC +
Preference number: 2 (lower is better)
Translates to: GHVVGGLDVCIFDVSFHVCRQTR*CSAGAC
Trigger: GCATGCCCCAGCCGAACATCATCTGGTCTGCCTGCA...GACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCATCATCTGGACAAATGTaGAACCACCTGGAATACTCT +
Preference number: 2 (lower is better)
Translates to: SILSSTQTSAQVLEWWAASSGQM*NHLEYS
Trigger: AGAGTATTCCAGGTGGTTGCACATTTGTCCAGATGA...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR GCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTCAGCAAATTGTAGTGTaGCCACCTCTCCCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMAQQIVV*PPLPGA
Trigger: GGCTCCTGGGAGAGGTGGGCACACTACAATTTGCTG...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR GCA 90 bp GGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTCATGTCAGTGGCCGATCCACGTaGTGCAGACGCAGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: GHVVGGLDVCIFDVSFHVSGRST*CRRSVL
Trigger: GAGCACACTGCGTCTGCAGCACGTGGATCGGCCACT...GACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACGAGAATCCTAGATTCTaGGTCATCAAGCCTAACTTT +
Preference number: 2 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNENPRF*VIKPNF
Trigger: AAAGTTAGGCTTGATGACCCAGAATCTAGGATTCTC...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CAA 90 bp GGTGATTATATCTTTGGTACCGTATTGAGAACCCACTCTCCCTCCTaGGACCAACTCTGGGGATCCCAGGGAAGTAAGGTGCCAACCTGC +
Preference number: 2 (lower is better)
Translates to: GDYIFGTVLRTHSPS*DQLWGSQGSKVPTC
Trigger: GCAGGTTGGCACCTTACTTCCCTGGGATCCCCAGAGTTGGTCCAAGGAGGGAGAGTGGGTTCTCAATACGGTACCAAAGATATAATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTCTCTTCCCTAGCTCCTaGGTGGATAAAAGTGCGAGG +
Preference number: 2 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGLFPSS*VDKSAR
Trigger: CCTCGCACTTTTATCCACCCAGGAGCTAGGGAAGAG...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACGACTTGCTGGGGGCCTaGGGAAGGGGCATGGTTCCT +
Preference number: 2 (lower is better)
Translates to: CLLQDITVLTVHSVFDADDLLGA*GRGMVP
Trigger: AGGAACCATGCCCCTTCCCCAGGCCCCCAGCAAGTC...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR GCA 90 bp GTAAGGGGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTCACTCTCCGTCACATTaGAGGTGTAGGTCCCCGAGT +
Preference number: 2 (lower is better)
Translates to: VRGHVVGGLDVCIFDVSFHSPSH*RCRSPS
Trigger: ACTCGGGGACCTACACCTGCAATGTGACGGAGAGTG...AAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCCCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACCCCCGGAGGTCATCGTaGGTAGTGAAAGAGGTCCCG +
Preference number: 2 (lower is better)
Translates to: CLLQDITVLTVHSVFDADPRRSS*VVKEVP
Trigger: CGGGACCTCTTTCACTACCCACGATGACCTCCGGGG...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACGCACAGGTGCTGGAGTaGTGGGCTGCAGGAGGTGAT +
Preference number: 2 (lower is better)
Translates to: CLLQDITVLTVHSVFDADAQVLE*WAAGGD
Trigger: ATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGC...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CCA 90 bp GGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTCATGTCCTTCTAACTCGGCACTaGGGATGTGCAGGATGGAGC +
Preference number: 2 (lower is better)
Translates to: GHVVGGLDVCIFDVSFHVLLTRH*GCAGWS
Trigger: GCTCCATCCTGCACATCCCCAGTGCCGAGTTAGAAG...GACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CAA 90 bp AGGAGCCCAGCTGACCCCCAGGATGGAAGTTTAGGGTATATGGCCTaGCTTCATCTGGACAAATGTGCAACCACCTGGAATACTCTAGAA +
Preference number: 2 (lower is better)
Translates to: RSPADPQDGSLGYMA*LHLDKCATTWNTLE
Trigger: TTCTAGAGTATTCCAGGTGGTTGCACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTCAGCTGGGCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR GCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACTGCTATGGCTGCGTGTaGTCCAAGTGCCCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: CLLQDITVLTVHSVFDADCYGCV*SKCPGQ
Trigger: TTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCA...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR TCA 90 bp GGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTCATGTCATGGCCTTTTCATCCTaGTGGTCATTCACACTCTCC +
Preference number: 2 (lower is better)
Translates to: GHVVGGLDVCIFDVSFHVMAFSS*WSFTLS
Trigger: GGAGAGTGTGAATGACCATCAGGATGAAAAGGCCAT...GACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CAA 90 bp CTAAAAATATTTGTAAACCTAGGTGATTATATCTTTGGTACCGTATaGAGAACCCACTCTCCCTCCTTGGACCAACTCTGGGGATCCCAG +
Preference number: 2 (lower is better)
Translates to: LKIFVNLGDYIFGTV*RTHSPSLDQLWGSQ
Trigger: CTGGGATCCCCAGAGTTGGTCCAAGGAGGGAGAGTGGGTTCTCAATACGGTACCAAAGATATAATCACCTAGGTTTACAAATATTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 72 bp CCTCCTGCGTGTCCTGGCCCACAGCGTTGCGCAGCGTaGAGCGCACCGACAGTGGCCGATCCACGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: PPACPGPQRCAA*SAPTVADPRAA
Trigger: TGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp GCCCAACGGGCAGAGCATTGCTGTAGAGCTCCGCGCTaGGCGGGCGGCGCTTGTCGGAGTGGTGCTGCAGGA +
Preference number: 3 (lower is better)
Translates to: AQRAEHCCRAPR*AGGACRSGAAG
Trigger: TCCTGCAGCACCACTCCGACAAGCGCCGCCCGCCCAGCGCGGAGCTCTACAGCAATGCTCTGCCCGTTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp CTGAGTTCCCTGGGGGAACCCTGGCTCAGAGTCAGTTaGCCTCCCTGGAGGCAGAGGGCTGGTCACGGCCCC +
Preference number: 3 (lower is better)
Translates to: LSSLGEPWLRVS*PPWRQRAGHGP
Trigger: GGGGCCGTGACCAGCCCTCTGCCTCCAGGGAGGCCAACTGACTCTGAGCCAGGGTTCCCCCAGGGAACTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 72 bp GCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTaGCCGATCCACGTGCTGCAGACGCAGTGTGCTCAC +
Preference number: 3 (lower is better)
Translates to: AHSVAQRAAHRQ*PIHVLQTQCAH
Trigger: GTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp AAGGAGTGTGGCACCACGATGACCTCCTGCGTGTCCTaGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGAC +
Preference number: 3 (lower is better)
Translates to: KECGTTMTSCVS*PTALRSVQRTD
Trigger: GTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGGTCATCGTGGTGCCACACTCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 72 bp CGCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTaGTGCAGACGCAGTGTGCTCACCACCTCAAACTCC +
Preference number: 3 (lower is better)
Translates to: RSVQRTDSGRST*CRRSVLTTSNS
Trigger: GGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp GCTCTGACACATACCGGGTCTCCGACACGTTGCGCGTaGACAGGGCGATTTCGCCAGCGCTGGAGTCGCCCA +
Preference number: 3 (lower is better)
Translates to: ALTHTGSPTRCA*TGRFRQRWSRP
Trigger: TGGGCGACTCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTATGTGTCAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp TCCGGCAACTGTTCCAGCTCTGGCTCCGGCTCCACCTaGAGCTCAAGCTGGGGCTCTGGCTCTGGTTCGTCC +
Preference number: 3 (lower is better)
Translates to: SGNCSSSGSGST*SSSWGSGSGSS
Trigger: GGACGAACCAGAGCCAGAGCCCCAGCTTGAGCTCCAGGTGGAGCCGGAGCCAGAGCTGGAACAGTTGCCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CAA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTCTGGCTCAGAGTCAGTaGGCCTCCCTGGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSLAQSQ*ASLEAE
Trigger: CTCTGCCTCCAGGGAGGCCAACTGACTCTGAGCCAG...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 72 bp AAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGTaGTCCAAGTGCCCTGGGCAAGGGCTGCAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: KDRDTGTCYGCV*SKCPGQGLQAG
Trigger: CCCAGCCTGCAGCCCTTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 72 bp GGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTaGGTGTGCTCCAAGTGCCCTGGGCAAGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: GLKDRDTGTCYG*VCSKCPGQGLQ
Trigger: CTGCAGCCCTTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 72 bp AGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTaGAGACGCAGTGTGCTCACCACCTCAAACTCCTGC +
Preference number: 3 (lower is better)
Translates to: SVQRTDSGRSTC*RRSVLTTSNSC
Trigger: GCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp CCAGGCAAGCGGGCCTGGGACCGAAGGATGGCTGGGTaGTCACTCCTCAGAAACTCCTCATCCACCTGCTGG +
Preference number: 3 (lower is better)
Translates to: PGKRAWDRRMAG*SLLRNSSSTCW
Trigger: CCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp TGGAGCTCAAGCTGGGGCTCTGGCTCTGGTTCGTCCTaGGGCTCCAGGGGGCTGTCACAGGAGATGGTTGAG +
Preference number: 3 (lower is better)
Translates to: WSSSWGSGSGSS*GSRGLSQEMVE
Trigger: CTCAACCATCTCCTGTGACAGCCCCCTGGAGCCCCAGGACGAACCAGAGCCAGAGCCCCAGCTTGAGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 72 bp GTGTCCGGCTCCGATGCAGCTCAGCAAATTGTAGTGTaGCCACCTCTCCCAGGAGCCGCACGTAGCCGCTCT +
Preference number: 3 (lower is better)
Translates to: VSGSDAAQQIVV*PPLPGAARSRS
Trigger: AGAGCGGCTACGTGCGGCTCCTGGGAGAGGTGGGCACACTACAATTTGCTGAGCTGCATCGGAGCCGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 72 bp GTGTCAGCTCTGACACATACCGGGTCTCCGACACGTTaGGCGTGGACAGGGCGATTTCGCCAGCGCTGGAGT +
Preference number: 3 (lower is better)
Translates to: VSALTHTGSPTR*AWTGRFRQRWS
Trigger: ACTCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTATGTGTCAGAGCTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp AAAGCTTCCAGAAGGGGACAGCTGATAAGGGCAGCCTaGCTGACAGGAAGCCCGGTCAGGCCAGGCCAGGAG +
Preference number: 3 (lower is better)
Translates to: KASRRGQLIRAA*LTGSPVRPGQE
Trigger: CTCCTGGCCTGGCCTGACCGGGCTTCCTGTCAGCCAGGCTGCCCTTATCAGCTGTCCCCTTCTGGAAGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 72 bp GGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTaGCATCATAGGGAGGAGACTGGCTTTCTTCTGGAT +
Preference number: 3 (lower is better)
Translates to: GPRPARARERRD*HHREETGFLLD
Trigger: ATCCAGAAGAAAGCCAGTCTCCTCCCTATGATGCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 72 bp GATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATaGCTGCGTGTGCTCCAAGTGCCCTGGGCAAGGGCT +
Preference number: 3 (lower is better)
Translates to: DGPEGQGHRHLL*LRVLQVPWARA
Trigger: AGCCCTTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 72 bp GAACCCAGGCAAGCGGGCCTGGGACCGAAGGATGGCTaGGTGGTCACTCCTCAGAAACTCCTCATCCACCTG +
Preference number: 3 (lower is better)
Translates to: EPRQAGLGPKDG*VVTPQKLLIHL
Trigger: CAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp CCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTaGTGTCCAGGGGAGATCGGAGGCCATGGAACCCAG +
Preference number: 3 (lower is better)
Translates to: PHWAARQYRGRS*CPGEIGGHGTQ
Trigger: CTGGGTTCCATGGCCTCCGATCTCCCCTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CAA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGCCCTCTTTGTCCCTTTaGCCCAGGATACCCCCGGAG +
Preference number: 3 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGPSLSL*PRIPPE
Trigger: CTCCGGGGGTATCCTGGGCAAAAGGGACAAAGAGGG...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR TCA 72 bp CCAGGGGGCTGTCACAGGAGATGGTTGAGGAGGTGTTaGCTTCATTCAGGGTGGAGCTGGCTAGGCTGGGGG +
Preference number: 3 (lower is better)
Translates to: PGGCHRRWLRRC*LHSGWSWLGWG
Trigger: CCCCCAGCCTAGCCAGCTCCACCCTGAATGAAGTCAACACCTCCTCAACCATCTCCTGTGACAGCCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 72 bp GGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTaGTATGGCTGCGTGTGCTCCAAGTGCCCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: GLMGLKDRDTGT*YGCVCSKCPGQ
Trigger: TTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 72 bp GCTTGTCGGAGTGGTGCTGCAGGAAGGTGTGTTTGTTaGGGTGCAGGTAGTCCACCAGGTCTCCGTAGCGGC +
Preference number: 3 (lower is better)
Translates to: ACRSGAAGRCVC*GAGSPPGLRSG
Trigger: GCCGCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTGCAGCACCACTCCGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp GGTGCGGTTGTCTTTGAACCACAGGACAGTGGGCGGTaGGTAGGCCTCGAACACTACCTGCAGTGTCCGGCT +
Preference number: 3 (lower is better)
Translates to: GAVVFEPQDSGR*VGLEHYLQCPA
Trigger: AGCCGGACACTGCAGGTAGTGTTCGAGGCCTACCCACCGCCCACTGTCCTGTGGTTCAAAGACAACCGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp AGAGCTGGACCTCAGCATCCTCATGGAAGGCCCGCATaGTGTAGTGGCCAGCCTCTGCCACCTTCACGCGAA +
Preference number: 3 (lower is better)
Translates to: RAGPQHPHGRPA*CSGQPLPPSRE
Trigger: TTCGCGTGAAGGTGGCAGAGGCTGGCCACTACACCATGCGGGCCTTCCATGAGGATGCTGAGGTCCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp CATGGAACCCAGGCAAGCGGGCCTGGGACCGAAGGATaGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCA +
Preference number: 3 (lower is better)
Translates to: HGTQASGPGTEG*LGGHSSETPHP
Trigger: TGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGGGTTCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CAA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGGGGGGTGTCCTGTACTaGGCTCAGCCTCCAGCATTA +
Preference number: 3 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGGGVLY*AQPPAL
Trigger: TAATGCTGGAGGCTGAGCCAAGTACAGGACACCCCC...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR TCA 72 bp CGTCAGCAACCTCGGGTTTGGGGTCAGGCAGGGGGATaGTATAGTCGTTGTCACCCTCATTGGGCTGCACGG +
Preference number: 3 (lower is better)
Translates to: RQQPRVWGQAGG*YSRCHPHWAAR
Trigger: CCGTGCAGCCCAATGAGGGTGACAACGACTATATCATCCCCCTGCCTGACCCCAAACCCGAGGTTGCTGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 72 bp TCCAGGACACCGGCTGTCACTCTAAGTCAAGGCCTGTaGAGCTGTGTTCTTGAGACTTGCTGGGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: SRTPAVTLSQGL*SCVLETCWGPG
Trigger: CCCAGGCCCCCAGCAAGTCTCAAGAACACAGCTGCACAGGCCTTGACTTAGAGTGACAGCCGGTGTCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 72 bp GTGCTGGAGTGGTGGGCTGCAGGAGGTGATCTCATTTaGCCTCTTTGTCCCTTTTGCCCAGGATACCCCCGG +
Preference number: 3 (lower is better)
Translates to: VLEWWAAGGDLI*PLCPFCPGYPR
Trigger: CCGGGGGTATCCTGGGCAAAAGGGACAAAGAGGGCAAATGAGATCACCTCCTGCAGCCCACCACTCCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 72 bp CTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTaGTGGGCTGCAGGAGGTGATCTCATTTGCCCTCTT +
Preference number: 3 (lower is better)
Translates to: LSSTQTSAQVLE*WAAGGDLICPL
Trigger: AAGAGGGCAAATGAGATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 72 bp CCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTaGAGTGGTGGGCTGCAGGAGGTGATCTCATTTGCC +
Preference number: 3 (lower is better)
Translates to: PFCLRRRPRHRC*SGGLQEVISFA
Trigger: GGCAAATGAGATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 72 bp TGCTCCTCCTCCCAGTACGTCACGTTAGTCTCCAGCTaGCTCTCCTCTTCGGAACTGTTCCCCAGCAGCGTG +
Preference number: 3 (lower is better)
Translates to: CSSSQYVTLVSS*LSSSELFPSSV
Trigger: CACGCTGCTGGGGAACAGTTCCGAAGAGGAGAGCCAGCTGGAGACTAACGTGACGTACTGGGAGGAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CAA 90 bp ATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCAGGGTGCGGTTGTCTTaGAACCACAGGACAGTGGGC +
Preference number: 3 (lower is better)
Translates to: IHVLQTQCAHHLKLLLLLRVRLS*NHRTVG
Trigger: GCCCACTGTCCTGTGGTTCAAAGACAACCGCACCCT...GAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CAA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTAGCCAGCCCCAGGGTTaGGGGCACAACACGTCAGGA +
Preference number: 3 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTSQPQG*GHNTSG
Trigger: TCCTGACGTGTTGTGCCCCAAACCCTGGGGCTGGCT...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CAA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGGAGAGCTATGATTCCTaGAGGGGTAGCTGGCTGAAC +
Preference number: 3 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGESYDS*RGSWLN
Trigger: GTTCAGCCAGCTACCCCTCAAGGAATCATAGCTCTC...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CAA 90 bp TATAGTCGTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGAGCCGCCCACTTTCTTaGCGGGGGTATGTCCACTCG +
Preference number: 3 (lower is better)
Translates to: YSRCHPHWAARQYRGRSWSRPLS*RGYVHS
Trigger: CGAGTGGACATACCCCCGCAAAGAAAGTGGGCGGCT...CCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAACGACTATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CAA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTCGGGTCTCCGACACGTaGCGCGTGGACAGGGCGATT +
Preference number: 3 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFRVSDT*RVDRAI
Trigger: AATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCG...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CAA 90 bp GGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGTCACGTGGACACCTTTaGAGGTCTCTGCAGGCAGAC +
Preference number: 3 (lower is better)
Translates to: GMGRLGHAVTPFDGIVELSRGHL*RSLQAD
Trigger: GTCTGCCTGCAGAGACCTCAAAAGGTGTCCACGTGA...CAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR TCA 72 bp GGAGATGATGGTGAGCACCACCAGGGCCAGGATGGCTaGGATCACCACCACCTTAAAGGGCAAGGAGTGTGG +
Preference number: 3 (lower is better)
Translates to: GDDGEHHQGQDG*DHHHLKGQGVW
Trigger: CCACACTCCTTGCCCTTTAAGGTGGTGGTGATCTCAGCCATCCTGGCCCTGGTGGTGCTCACCATCATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR TCA 72 bp AGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTaGTGGCATTGTAGAACTGCTCGTTCATGGGCAGCT +
Preference number: 3 (lower is better)
Translates to: RHGQAGPCGNPV*WHCRTARSWAA
Trigger: AGCTGCCCATGAACGAGCAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 72 bp TGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTaGTCCTCCTCCCAGTACGTCACGTTAGTCTCCAGC +
Preference number: 3 (lower is better)
Translates to: CCRRSVLTTSNS*SSSQYVTLVSS
Trigger: GCTGGAGACTAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp TGTCCCTTTTGCCCAGGATACCCCCGGAGGTCATCGTaGGTAGTGAAAGAGGTCCCGTGGTCTTCCCATGTC +
Preference number: 3 (lower is better)
Translates to: CPFCPGYPRRSS*VVKEVPWSSHV
Trigger: GACATGGGAAGACCACGGGACCTCTTTCACTACCCACGATGACCTCCGGGGGTATCCTGGGCAAAAGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CAA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACTCTCATTTGCCCTCTTaGTCCCTTTTGCCCAGGATA +
Preference number: 3 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNSHLPS*SLLPRI
Trigger: TATCCTGGGCAAAAGGGACAAAGAGGGCAAATGAGA...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CAA 90 bp CGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCTATGTCCACTCGAAGTaGACCACCTCATTCCCGATC +
Preference number: 3 (lower is better)
Translates to: RQWPIHVLQTQCAHHLKLYVHSK*TTSFPI
Trigger: GATCGGGAATGAGGTGGTCAACTTCGAGTGGACATA...GAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR TCA 72 bp CCACGAGGTCCATGTAGCTTAGCACTGGAGACTCGTTaGTCAAAGTTGCTCGGCAGGTCCTCTCAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: PRGPCSLALETR*SKLLGRSSQGQ
Trigger: CTGCCCCTGAGAGGACCTGCCGAGCAACTTTGATCAACGAGTCTCCAGTGCTAAGCTACATGGACCTCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 72 bp GCAGGAGGTGATCTCATTTGCCCTCTTTGTCCCTTTTaGCCAGGATACCCCCGGAGGTCATCGTGGGTAGTG +
Preference number: 3 (lower is better)
Translates to: AGGDLICPLCPF*PGYPRRSSWVV
Trigger: CACTACCCACGATGACCTCCGGGGGTATCCTGGGCAAAAGGGACAAAGAGGGCAAATGAGATCACCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 72 bp TGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTaGTGGAGTGGTGGGCTGCAGGAGGTGATCTCATTT +
Preference number: 3 (lower is better)
Translates to: CPFCLRRRPRHR*WSGGLQEVISF
Trigger: AAATGAGATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 72 bp GGGACTGGCATCATAGGGAGGAGACTGGCTTTCTTCTaGATGAGGCAACACTGCTCAAGGCTAGGCCCTAGC +
Preference number: 3 (lower is better)
Translates to: GTGIIGRRLAFF*MRQHCSRLGPS
Trigger: GCTAGGGCCTAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGATGCCAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR-3UTR CAA 90 bp GGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGCTCGTTCAGATCTTGACCAGCTaGCCTTCACAGATGAGCACG +
Preference number: 3 (lower is better)
Translates to: GRLGHAVTPFDGIVELLVQILTS*PSQMST
Trigger: CGTGCTCATCTGTGAAGGCAAGCTGGTCAAGATCTG...AACGAGCAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp AGCTCCAGCACTCGGACAGGGACATTGATCTGTAGCTaGAAGGAGAGCTGGACCTCAGCATCCTCATGGAAG +
Preference number: 3 (lower is better)
Translates to: SSSTRTGTLICS*KESWTSASSWK
Trigger: CTTCCATGAGGATGCTGAGGTCCAGCTCTCCTTCCAGCTACAGATCAATGTCCCTGTCCGAGTGCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp CCGAGTCTTCTAACTCGGCACTGGGGATGTGCAGGATaGAGCGGATGTGGTAAGGCATATCCAAGAGGAAGT +
Preference number: 3 (lower is better)
Translates to: PSLLTRHWGCAG*SGCGKAYPRGS
Trigger: ACTTCCTCTTGGATATGCCTTACCACATCCGCTCCATCCTGCACATCCCCAGTGCCGAGTTAGAAGACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CAA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTACTCGGACAGGGACATaGATCTGTAGCTGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFTRTGT*ICSWKE
Trigger: CTCCTTCCAGCTACAGATCAATGTCCCTGTCCGAGT...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR-3UTR CAA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACCAGGGACACAGGCACTaGCTATGGCTGCGTGTGCTC +
Preference number: 3 (lower is better)
Translates to: CLLQDITVLTVHSVFDADQGHRH*LWLRVL
Trigger: GAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTG...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 72 bp TTTCATCCTGATGGTCATTCACACTCTCCGTCACATTaGAGGTGTAGGTCCCCGAGTCTTCTAACTCGGCAC +
Preference number: 3 (lower is better)
Translates to: FHPDGHSHSPSH*RCRSPSLLTRH
Trigger: GTGCCGAGTTAGAAGACTCGGGGACCTACACCTGCAATGTGACGGAGAGTGTGAATGACCATCAGGATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR TCA 72 bp CTCTCAACCACGGTGATGTTGATGGCCTTTTCATCCTaGTGGTCATTCACACTCTCCGTCACATTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: LSTTVMLMAFSS*WSFTLSVTLQV
Trigger: CACCTGCAATGTGACGGAGAGTGTGAATGACCATCAGGATGAAAAGGCCATCAACATCACCGTGGTTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR TCA 72 bp GGGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTaGCGTCTCCTTTCATGTCCAGCATGGGCACATAGT +
Preference number: 3 (lower is better)
Translates to: GPCSWRTRCLHI*RLLSCPAWAHS
Trigger: ACTATGTGCCCATGCTGGACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR GCA 72 bp ATCGTAAGGGGCCATGTAGTTGGAGGACTCGATGTCTaGATATTTGACGTCTCCTTTCATGTCCAGCATGGG +
Preference number: 3 (lower is better)
Translates to: IVRGHVVGGLDV*IFDVSFHVQHG
Trigger: CCCATGCTGGACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCCCCTTACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CCA 72 bp GCAAACCTCCAAAGCGCCCACCTCTCACATCCTTCTTaGGGTACCCATCTGAAGCTTCTTGTCTTTTACAAG +
Preference number: 3 (lower is better)
Translates to: ANLQSAHLSHPS*GTHLKLLVFYK
Trigger: CTTGTAAAAGACAAGAAGCTTCAGATGGGTACCCCAAGAAGGATGTGAGAGGTGGGCGCTTTGGAGGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CCA 72 bp TCCCCACCTGTCAGCCAGGGAGAGAATCCTAGATTCTaGGTCATCAAGCCTAACTTTCCCATTTTACATATG +
Preference number: 3 (lower is better)
Translates to: SPPVSQGENPRF*VIKPNFPILHM
Trigger: CATATGTAAAATGGGAAAGTTAGGCTTGATGACCCAGAATCTAGGATTCTCTCCCTGGCTGACAGGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR GCA 72 bp TTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTaGAACCACCTGGAATACTCTAGAATGTTAGTGCTG +
Preference number: 3 (lower is better)
Translates to: FRVYGLASSGQM*NHLEYSRMLVL
Trigger: CAGCACTAACATTCTAGAGTATTCCAGGTGGTTGCACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAGTCGCCCAGGGTGGCTGGGCAGCAGGGCTaGGGGGCCGGCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DTLRVDRAISPALESPRVAGQQG*GAGSLL
Trigger: GAGGAGAGAGCCGGCCCCTCAGCCCTGCTGCCCAGC...CACCCTGGGCGACTCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAGTCGCCCAGGGTCCTGGCCCACAGCGTTaGGCAGCGTGCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: RHVARGQGDFASAGVAQGPGPQR*AACSAP
Trigger: CGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGG...ACCCTGGGCGACTCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCGGGCCGCCCTGGGTCTaGCTGTCTGCGTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRGPPWV*LSALGR
Trigger: CCTGCCCAACGCAGACAGCCAGACCCAGGGCGGCCC...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCCTGGCCCCGGGGGTGTaGCGACCAGGCCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGLAPGV*RPGPER
Trigger: TCTCTCAGGGCCTGGTCGTCACACCCCCGGGGCCAG...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCAGCGTTGCGCAGCGTaGAGCGCACCGACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRQRCAA*SAPTVA
Trigger: GGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTG...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCGTGTCCTGGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCGATTTCGCCAGCGCTaGAGTCGCCCAGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: ACPGPQRCAACSAPTVADRFRQR*SRPGCG
Trigger: ACCGCACCCTGGGCGACTCCAGCGCTGGCGAAATCG...ATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CCGCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCTGGCTCCGGCCGCCAGGTCTCTGTaGACGCAGTTCTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPEAQGTPNPATVPALAPAARSL*TQFLEA
Trigger: GGCCTCCAAGAACTGCGTCCACAGAGACCTGGCGGC...CGGAGCCAGAGCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CCGCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCTGGCTCCGGACAGGCAGGACTGGTaGAGGCTCCTGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PPEAQGTPNPATVPALAPDRQDW*RLLKAQ
Trigger: CTGAGCCTTCAGGAGCCTGCACCAGTCCTGCCTGTC...CGGAGCCAGAGCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp GCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCTGGCTCCGGCGCCTCGAACACTACCTaGAGTGTCCGGCTCCGATGC +
Preference number: 4 (lower is better)
Translates to: ARGAGHPESGNCSSSGSGASNTT*SVRLRC
Trigger: GCATCGGAGCCGGACACTGCAGGTAGTGTTCGAGGC...GCCGGAGCCAGAGCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCTGGCTCCGGCTGCCATCCTGGGCCTTaGCCATTTCCTGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ARGAGHPESGNCSSSGSGCHPGP*PFPVGA
Trigger: AGCCCCCACAGGAAATGGCCAAGGCCCAGGATGGCA...GCCGGAGCCAGAGCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp AGGCTGGGGGAACCCTCCAGTGGGCCCTCGTCAGCAACCTCGGGTTTGGGGTCACGTCCCAGCACAAGCTaGTCCCGCGGCAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RLGEPSSGPSSATSGLGSRPSTS*SRGSSH
Trigger: GTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACG...TGACCCCAAACCCGAGGTTGCTGACGAGGGCCCACTGGAGGGTTCCCCCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CAA 72 bp ACCACGATGACCTCCTGCGTGTCCTGGCCCACAGCGTaGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCC +
Preference number: 4 (lower is better)
Translates to: TTMTSCVSWPTA*RSVQRTDSGRS
Trigger: GGATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGGTCATCGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGGCTGGGCAGCAGGGCTaGGGGGCCGGCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGAGQQG*GAGSLL
Trigger: GAGGAGAGAGCCGGCCCCTCAGCCCTGCTGCCCAGC...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCACAGCAGCTCGCCTTTaGGGGCCAGAGCTGGCATCG +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRTAARL*GPELAS
Trigger: CGATGCCAGCTCTGGCCCTCAAAGGCGAGCTGCTGT...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCACCCCCATGGAGCGCTaGCTCAGGGATGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGTPMER*LRDGAA
Trigger: AGCTGCCCCATCCCTGAGGCAGCGCTCCATGGGGGT...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GATCTCATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGGGGCCGCCCTGGGTCTaGCTGTCTGCGTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DLIDLVGGMGRLGHAVTPGPPWV*LSALGR
Trigger: CCTGCCCAACGCAGACAGCCAGACCCAGGGCGGCCC...CGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTATGAGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCGACACGTTGCGCGTaGACAGGGCGATTTCGCCAG +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRPTRCA*TGRFRQ
Trigger: CTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGG...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCGTGTCCTGGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGATCATGGAAGGCCCGCATaGTGTAGTGGCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ACPGPQRCAACSAPTVADHGRPA*CSGQPL
Trigger: CAGAGGCTGGCCACTACACCATGCGGGCCTTCCATG...ATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TCCTCTGCTTCCGCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCCAGATGATGTTCGGCTaGGGCATGCCCCGGCCACGA +
Preference number: 4 (lower is better)
Translates to: SSASARGAGHPESGNCSSQMMFG*GMPRPR
Trigger: TCGTGGCCGGGGCATGCCCCAGCCGAACATCATCTG...GCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGCGGAAGCAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TCCTCTGCTTCCGCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCAGGCCATGAGCCGTaGCCTCCACCACCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSASARGAGHPESGNCSSSGHEP*PPPPAQ
Trigger: TTGGGCAGGTGGTGGAGGCCACGGCTCATGGCCTGA...GCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGCGGAAGCAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCGTCAGTTGGCCTCCCTaGAGGCAGAGGGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRVSWPP*RQRAGH
Trigger: GTGACCAGCCCTCTGCCTCCAGGGAGGCCAACTGAC...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTGCGCTGCCTCAGGGATaGGGCAGCTGGTGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSALPQG*GSWWVR
Trigger: CCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCGCACGCTGGAGAAGGTaGCATCCTGGGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGARWRR*HPGPWP
Trigger: TGGCCAAGGCCCAGGATGGCACCTTCTCCAGCGTGC...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCGTAGTGGCCAGCCTCTaGCACCTTCACGCGAACCAG +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRVVASL*HLHANQ
Trigger: CTGGTTCGCGTGAAGGTGGCAGAGGCTGGCCACTAC...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACTGTTCGGCTGGGGCATaGCCCGGCCACGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNCSAGA*PGHDSG
Trigger: TCCGCTGTCGTGGCCGGGGCATGCCCCAGCCGAACA...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGCCAGGCAAGCGGGCCTaGGACCGAAGGATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKPGKRA*DRRMAG
Trigger: CCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGG...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAGGAGATCGGAGGCCATaGAACCCAGGCAAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGGDRRP*NPGKRA
Trigger: GGCCCGCTTGCCTGGGTTCCATGGCCTCCGATCTCC...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAGGCTCCGGCTCCACCTaGAGCTCAAGCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGGSGST*SSSWGS
Trigger: AGAGCCCCAGCTTGAGCTCCAGGTGGAGCCGGAGCC...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp GCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCTGGCTCCGGCAGAGTGGGTAACAGCTaGGTAGAAGGACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ARGAGHPESGNCSSSGSGRVGNS*VEGQAG
Trigger: TCCTGCCTGTCCTTCTACTCAGCTGTTACCCACTCT...GCCGGAGCCAGAGCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCGTGACGACCAGGCCCTaGGAGATCTGTGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRVTTRP*EICGSR
Trigger: TCTGGAACCACAGATCTCTCAGGGCCTGGTCGTCAC...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCGTGACGACCAGGCCCTaGGAGATCTGTGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AACSAPTVADPRAADAVCVTTRP*EICGSR
Trigger: TCTGGAACCACAGATCTCTCAGGGCCTGGTCGTCAC...GCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAAGTGTGGCACCACGATaGCCTCCTGCGTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGSVAPR*PPACPG
Trigger: GCCAGGACACGCAGGAGGTCATCGTGGTGCCACACT...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp AGCCGAGGGTGCGTCCCAGCACAAGCTGGTCCCGCGGCAGCTCCCACGTGGAGTACCACCTCAAACTCCTaGTCCTCCTCCCAGTACGTC +
Preference number: 4 (lower is better)
Translates to: SRGCVPAQAGPAAAPTWSTTSNS*SSSQYV
Trigger: GACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGT...ACTCCACGTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACGCACCCTCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAGTCGCCCAGGGTAAGGACAGGCAGGACTaGTGCAGGCTCCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RHVARGQGDFASAGVAQGKDRQD*CRLLKA
Trigger: AGCCTTCAGGAGCCTGCACCAGTCCTGCCTGTCCTT...ACCCTGGGCGACTCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCCATGGAAGGCCCGCATaGTGTAGTGGCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGHGRPA*CSGQPL
Trigger: CAGAGGCTGGCCACTACACCATGCGGGCCTTCCATG...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCACGTCCCAGCACAAGCTaGTCCCGCGGCAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAARPSTS*SRGSSH
Trigger: GTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACG...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTTCAGGCCATGAGCCGTaGCCTCCACCACCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSSGHEP*PPPPAQ
Trigger: TTGGGCAGGTGGTGGAGGCCACGGCTCATGGCCTGA...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGATCAAGGACACATGGCTaGGCAGGGGGAGCCCAACGG +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGSRTHG*AGGAQR
Trigger: CCGTTGGGCTCCCCCTGCCCAGCCATGTGTCCTTGA...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GATCTCATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGCCGGTCAAGGACACATaGCTGGGCAGGGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DLIDLVGGMGRLGHAVTPPVKDT*LGRGSP
Trigger: TGGGCTCCCCCTGCCCAGCCATGTGTCCTTGACCGG...CGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTATGAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCCCTGGGACCGAAGGATaGCTGGGTGGTCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGPGTEG*LGGHSS
Trigger: TGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGG...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCCAGGCAAGCGGGCCTaGGACCGAAGGATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RQWPIHVLQTQCAHHLKLPGKRA*DRRMAG
Trigger: CCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGG...GAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACGGAGATCGGAGGCCATaGAACCCAGGCAAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNGDRRP*NPGKRA
Trigger: GGCCCGCTTGCCTGGGTTCCATGGCCTCCGATCTCC...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATCCTCATGGAAGGCCCGCATGGTGTAGTGGCCAGCCTCTGCCACCTTCACGCGGGGGGAACCCTCCAGTaGGCCCTCGTCAGCAACCTC +
Preference number: 4 (lower is better)
Translates to: ILMEGPHGVVASLCHLHAGGTLQ*ALVSNL
Trigger: GAGGTTGCTGACGAGGGCCCACTGGAGGGTTCCCCC...CGCGTGAAGGTGGCAGAGGCTGGCCACTACACCATGCGGGCCTTCCATGAGGAT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGTGGAGCTGGCTAGGCTaGGGGAACCCTCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKWSWLG*GNPPVG
Trigger: GCCCACTGGAGGGTTCCCCCAGCCTAGCCAGCTCCA...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCACTGGCACACACACGTaGCCACTCCACACTGGCACA +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRTGTHT*PLHTGT
Trigger: TGTGCCAGTGTGGAGTGGCCACGTGTGTGTGCCAGT...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCCCCCGGAGGTCATCGTaGGTAGTGAAAGAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGPRRSS*VVKEVP
Trigger: CGGGACCTCTTTCACTACCCACGATGACCTCCGGGG...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGATGCAGGCAGACCAGATaGTGTTCGGCTGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGCRQTR*CSAGAC
Trigger: GCATGCCCCAGCCGAACATCATCTGGTCTGCCTGCA...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CCGCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCTGGCTCCGGACCACAGTCTGCACTaGGTTCACAGAGACGTTGAT +
Preference number: 4 (lower is better)
Translates to: PPEAQGTPNPATVPALAPDHSLH*VHRDVD
Trigger: ATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTC...CGGAGCCAGAGCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCACTCTCCGTCACATTaGAGGTGTAGGTCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRHSPSH*RCRSPS
Trigger: ACTCGGGGACCTACACCTGCAATGTGACGGAGAGTG...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAAGTGGCCGATCCACGTaGTGCAGACGCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGSGRST*CRRSVL
Trigger: GAGCACACTGCGTCTGCAGCACGTGGATCGGCCACT...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp GCTGCAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCCAGCGTTGCGCAGCGTaGAGCGCACCGACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: AAGRCVCCGAGSPPGLRSQRCAA*SAPTVA
Trigger: GGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTG...GCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGCAGGAAGCTATCCTCTaGTTCCGCCCGAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKQEAIL*FRPRRR
Trigger: CCTGCGCCTCGGGCGGAAGCAGAGGATAGCTTCCTG...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGTGTCCCTGGGGCAGCTaGTGGGGGCTTTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKCPWGS*WGLSRT
Trigger: TGTCCTGGAAAGCCCCCAGCAGCTGCCCCAGGGACA...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCAGTAAGGTGCCAACCTaGAATGCAGGGTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRSKVPT*NAGLVP
Trigger: GGGCACCAACCCTGCATTGCAGGTTGGCACCTTACT...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp AGGCTGGGGGAACCCTCCAGTGGGCCCTCGTCAGCAACCTCGGGTTTGGGGTCAGCTGCTGATGGCTTCTaGTGTGGGCACAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLGEPSSGPSSATSGLGSAADGF*CGHSSR
Trigger: CCTGGAACTGTGCCCACACCAGAAGCCATCAGCAGC...TGACCCCAAACCCGAGGTTGCTGACGAGGGCCCACTGGAGGGTTCCCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGGGGAGATCGGAGGCCATTTTGAGGGCCAGAGCTaGCATCGCACCCGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: AARQYRGRSWCPGEIGGHFEGQS*HRTRKP
Trigger: CGGCTTCCGGGTGCGATGCCAGCTCTGGCCCTCAAA...ATGGCCTCCGATCTCCCCTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GATCTCATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTCCTGTGGGGGCTCCTaGGACATCCGTTCCCACACC +
Preference number: 4 (lower is better)
Translates to: DLIDLVGGMGRLGHAVTPSCGGS*DIRSHT
Trigger: GGTGTGGGAACGGATGTCCCAGGAGCCCCCACAGGA...CGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTATGAGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTTGCCATCCTGGGCCTTaGCCATTTCCTGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSCHPGP*PFPVGA
Trigger: AGCCCCCACAGGAAATGGCCAAGGCCCAGGATGGCA...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCGGAGGAAGCCCACGGTaGGATCTGGCACAAAGATGT +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRGGSPR*DLAQRC
Trigger: ACATCTTTGTGCCAGATCCCACCGTGGGCTTCCTCC...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAGTCGCCCAGGGTTGTCACCACCAGCTGTaGGTCTGTTACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: RHVARGQGDFASAGVAQGCHHQL*VCYSAW
Trigger: CCATGCCGAGTAACAGACCCACAGCTGGTGGTGACA...ACCCTGGGCGACTCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCGATTTCGCCAGCGCTaGAGTCGCCCAGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGRFRQR*SRPGCG
Trigger: ACCGCACCCTGGGCGACTCCAGCGCTGGCGAAATCG...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGACCTCCTGCGTGTCCTaGCCCACAGCGTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVTSCVS*PTALRS
Trigger: GCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGGT...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCTGGCTCCGGCCTTTCATGTCCAGCATaGGCACATAGTCCACCGACT +
Preference number: 4 (lower is better)
Translates to: ARGAGHPESGNCSSSGSGLSCPA*AHSPPT
Trigger: AGTCGGTGGACTATGTGCCCATGCTGGACATGAAAG...GCCGGAGCCAGAGCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp AGCCGAGGGTGCGTCCCAGCACAAGCTGGTCCCGCGGCAGCTCCCACGTGGAGTTGTGGACGCAGTTCTTaGAGGCCAGAAACTCCATGC +
Preference number: 4 (lower is better)
Translates to: SRGCVPAQAGPAAAPTWSCGRSS*RPETPC
Trigger: GCATGGAGTTTCTGGCCTCCAAGAACTGCGTCCACA...ACTCCACGTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACGCACCCTCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCAGAACTGCTCGTTCATaGGCAGCTCTGGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRRTARS*AALGKG
Trigger: CCCCTTACCCAGAGCTGCCCATGAACGAGCAGTTCT...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGATCTCGTCGGAGGCATaGGCAGGCTGGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGISSEA*AGWAMR
Trigger: CCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGAT...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCTGGAGCTGGCTAGGCTaGGGGAACCCTCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RQWPIHVLQTQCAHHLKLWSWLG*GNPPVG
Trigger: GCCCACTGGAGGGTTCCCCCAGCCTAGCCAGCTCCA...GAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTCATTCAGGGTGGAGCTaGCTAGGCTGGGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSHSGWS*LGWGNP
Trigger: AGGGTTCCCCCAGCCTAGCCAGCTCCACCCTGAATG...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTCAACTGTTCCAGCTCTaGCTCCGGCTCCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSQLFQL*LRLHLE
Trigger: CTCCAGGTGGAGCCGGAGCCAGAGCTGGAACAGTTG...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGGTGCTCCAAGTGCCCTaGGCAAGGGCTGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGVLQVP*ARAAGW
Trigger: CCAGCCTGCAGCCCTTGCCCAGGGCACTTGGAGCAC...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCTCTCCTCCTCCTTGTTaGTCTCCTCTCTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRSPPPC*SPLWLQ
Trigger: TTGGAGCCAGAGAGGAGATCAACAAGGAGGAGGAGA...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCGTTCACAGAGACGTTaGTGGATGACACCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRRSQRR*WMTPGV
Trigger: GACTCCAGGTGTCATCCATCAACGTCTCTGTGAACG...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCCTCGGACAGGGACATTaGTCTGTAGCTGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: AACSAPTVADPRAADAVCLGQGH*SVAGRR
Trigger: TCTCCTTCCAGCTACAGATCAATGTCCCTGTCCGAG...GCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp GTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGAGGCCCCCAACAGGTTaGCCACGTTCAGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VVTLIGLHGSIEDGAGVQRPPTG*PRSGGA
Trigger: GGCCCCACCTGAACGTGGTCAACCTGTTGGGGGCCT...CTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCGCTAGGTCTGGGCAGTaGCAAAACCATACCCCCATG +
Preference number: 4 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGARSGQ*QNHTPM
Trigger: CATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGC...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp ATCCTCATGGAAGGCCCGCATGGTGTAGTGGCCAGCCTCTGCCACCTTCACGCGTCGGCACTGGGGATGTaGAGGATGGAGCGGATGTGG +
Preference number: 4 (lower is better)
Translates to: ILMEGPHGVVASLCHLHASALGM*RMERMW
Trigger: CCACATCCGCTCCATCCTGCACATCCCCAGTGCCGA...CGCGTGAAGGTGGCAGAGGCTGGCCACTACACCATGCGGGCCTTCCATGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCCCAGTACGTCACGTTATGTTCGGCTGGGGCATaGCCCGGCCACGACAGCGGA +
Preference number: 4 (lower is better)
Translates to: RSVLTTSNSCSSSQYVTLCSAGA*PGHDSG
Trigger: TCCGCTGTCGTGGCCGGGGCATGCCCCAGCCGAACA...TAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGGGCCGATCCACGTGCTaGAGACGCAGTGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGGRSTC*RRSVLT
Trigger: GGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCC...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAACCACGATGACCTCCTaGGTGTCCTGGCCCACAGCG +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAATTMTS*VSWPTA
Trigger: CGCTGTGGGCCAGGACACGCAGGAGGTCATCGTGGT...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGTGCGTGTGCTCCAAGTaGCCTGGGCAAGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGCVCSK*PGQGLQ
Trigger: CTGCAGCCCTTGCCCAGGGCACTTGGAGCACACGCA...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGCCCTGGCACCTCCAATaGCCACTGGGCTGGGGACAA +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVPWHLQ*PLGWGQ
Trigger: TTGTCCCCAGCCCAGTGGGCATTGGAGGTGCCAGGG...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCACTCACAGAGCGATCCTaGGTCCCAGATAGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAALTERS*VPDRAG
Trigger: GCCCGCCCTATCTGGGACCCAGGATCGCTCTGTGAG...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTCACAGAGCGATCCTaGGTCCCAGATAGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RQWPIHVLQTQCAHHLKLLTERS*VPDRAG
Trigger: GCCCGCCCTATCTGGGACCCAGGATCGCTCTGTGAG...GAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGTCCTGTGGGGGCTCCTaGGACATCCGTTCCCACACC +
Preference number: 4 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGSCGGS*DIRSHT
Trigger: GGTGTGGGAACGGATGTCCCAGGAGCCCCCACAGGA...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCACGTTAGTCTCCAGCTaGCTCTCCTCTTCGGAACTG +
Preference number: 4 (lower is better)
Translates to: AACSAPTVADPRAADAVCTLVSS*LSSSEL
Trigger: CAGTTCCGAAGAGGAGAGCCAGCTGGAGACTAACGT...GCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGACCTCCTGCGTGTCCTaGCCCACAGCGTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GMGRLGHAVTPFDGIVELTSCVS*PTALRS
Trigger: GCTGCGCAACGCTGTGGGCCAGGACACGCAGGAGGT...CAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACCCACCAGGGCCAGGATaGCTGAGATCACCACCACCT +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNPPGPG*LRSPPP
Trigger: AGGTGGTGGTGATCTCAGCCATCCTGGCCCTGGTGG...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGACGGCCACTTTCATCGTaGCCTGAGAATGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGRPLSS*PENGSG
Trigger: GCCTGAGCCATTCTCAGGCCACGATGAAAGTGGCCG...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAGCCGCCAGGTCTCTGTaGACGCAGTTCTTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAAAARSL*TQFLEA
Trigger: GGCCTCCAAGAACTGCGTCCACAGAGACCTGGCGGC...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGATCTCGTCGGAGGCATaGGCAGGCTGGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: GMGRLGHAVTPFDGIVELISSEA*AGWAMR
Trigger: CCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGAT...CAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGGTGCGTCCCAGCACAAGCTGGTCCCGCGGCAGCTCCCACGTGGAGTCATAGGCGTTGTCACCCTCATTaGGCTGCACGGCAGTATAGA +
Preference number: 4 (lower is better)
Translates to: GCVPAQAGPAAAPTWSHRRCHPH*AARQYR
Trigger: TCTATACTGCCGTGCAGCCCAATGAGGGTGACAACG...CCTATGACTCCACGTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAGATGCGGGGCCCGTCTaGCCTTCTAGACTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAADAGPV*PSRLWW
Trigger: CCACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATC...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCAAAACCATACCCCCATaGAGCGCTGCCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGKTIPP*SAASGM
Trigger: CATCCCTGAGGCAGCGCTCCATGGGGGTATGGTTTT...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGCCTGCAATGCAGGGTTaGTGCCCAGAGGGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKPAMQG*CPEGLS
Trigger: GCTCAACCCCTCTGGGCACCAACCCTGCATTGCAGG...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CAA 72 bp AGTGTCAGCTCTGACACATACCGGGTCTCCGACACGTaGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SVSSDTYRVSDT*RVDRAISPALE
Trigger: CTCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTATGTGTCAGAGCTGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp GCAGCGTGCAGCGCACCGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCATGTCCACTCGAAGTTaGCCACCTCATTCCCGATCA +
Preference number: 4 (lower is better)
Translates to: AACSAPTVADPRAADAVCMSTRS*PPHSRS
Trigger: TGATCGGGAATGAGGTGGTCAACTTCGAGTGGACAT...GCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGCACGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGGGGTGCGGTTGTCTTTaGACCACAGGACAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGGCGCL*TTGQWA
Trigger: CGCCCACTGTCCTGTGGTTCAAAGACAACCGCACCC...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCATGCAGGCAGACCAGATaGTGTTCGGCTGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAACRQTR*CSAGAC
Trigger: GCATGCCCCAGCCGAACATCATCTGGTCTGCCTGCA...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp CGGGCGGCGCTTGTCGGAGTGGTGCTGCAGGAAGGTGTGTTTGTTGCGGTGCAGGCACTGGAGACTCGTTaGTCAAAGTTGCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAALVGVVLQEGVFVAVQALETR*SKLLGR
Trigger: CCTGCCGAGCAACTTTGATCAACGAGTCTCCAGTGC...CTGCACCGCAACAAACACACCTTCCTGCAGCACCACTCCGACAAGCGCCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGGACAGGCAGGACTGGTaGAGGCTCCTGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVDRQDW*RLLKAQ
Trigger: CTGAGCCTTCAGGAGCCTGCACCAGTCCTGCCTGTC...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGTGGCGGACCACAGTCTaGACTGCGTTCACAGAGACG +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKWRTTV*TAFTET
Trigger: CGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCA...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAGCCTCGAACACTACCTaGAGTGTCCGGCTCCGATGC +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAAASNTT*SVRLRC
Trigger: GCATCGGAGCCGGACACTGCAGGTAGTGTTCGAGGC...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGGGGTCTCCGACACGTTaGGCGTGGACAGGGCGATTT +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVGSPTR*AWTGRF
Trigger: AAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCC...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCGGCAGGCCGATCCACGTGCTaGAGACGCAGTGTGCTCACC +
Preference number: 4 (lower is better)
Translates to: QEGVFVAVQVVHQVSVAAGRSTC*RRSVLT
Trigger: GGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCC...TGCCGCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAAGTGGCCGATCCACGTaGTGCAGACGCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAASGRST*CRRSVL
Trigger: GAGCACACTGCGTCTGCAGCACGTGGATCGGCCACT...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTCCTGGCCCACAGCGTTaGGCAGCGTGCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTPGPQR*AACSAP
Trigger: CGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGG...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACTGCTATGGCTGCGTGTaGTCCAAGTGCCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNCYGCV*SKCPGQ
Trigger: TTGCCCAGGGCACTTGGAGCACACGCAGCCATAGCA...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACGGCACTTGCTATGGCTaGGTGTGCTCCAAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNGTCYG*VCSKCP
Trigger: AGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCC...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGCTCGTTAGGGCGGGCAGTCACTaGTGGCTGCTGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRLGHAVTPFDGIVELLVRAGSH*WLLAAS
Trigger: TGAGGCTGCCAGCAGCCAGCAGTGACTGCCCGCCCT...AACGAGCAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGCACAGTTCCAGGCTCTaGACAGTCACCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGHSSRL*TVTPSR
Trigger: CCTGGAGGGGGTGACTGTCCAGAGCCTGGAACTGTG...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGATTGAGGACAAGCTCTaGCCCCGGGGGTGTGACGAC +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGIEDKL*PRGCDD
Trigger: GTCGTCACACCCCCGGGGCCAGAGCTTGTCCTCAAT...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GGGTGCGTCCCAGCACAAGCTGGTCCCGCGGCAGCTCCCACGTGGAGTCATAGGCCCTGTCCCCAATGGTaGTTTTGCAGATGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: GCVPAQAGPAAAPTWSHRPCPQW*FCRCSF
Trigger: GAAGCTACATCTGCAAAACCACCATTGGGGACAGGG...CCTATGACTCCACGTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTTGGGGATGTGCAGGATaGAGCGGATGTGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSWGCAG*SGCGKA
Trigger: TGCCTTACCACATCCGCTCCATCCTGCACATCCCCA...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGCAGGACAGTGGGCGGTaGGTAGGCCTCGAACACTAC +
Preference number: 4 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGQDSGR*VGLEHY
Trigger: GTAGTGTTCGAGGCCTACCCACCGCCCACTGTCCTG...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CTTGCTCATGTCCATGTAGCCACCGTCGCTCTCCCCGGTCAAGGACACATGGCTCCGACACGTTGCGCGTaGACAGGGCGATTTCGCCAG +
Preference number: 4 (lower is better)
Translates to: LAHVHVATVALPGQGHMAPTRCA*TGRFRQ
Trigger: CTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGG...AGCCATGTGTCCTTGACCGGGGAGAGCGACGGTGGCTACATGGACATGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGGGGCGGCAGCTCACGTaGACACCTTTTGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKGRQLT*TPFEVS
Trigger: AGAGACCTCAAAAGGTGTCCACGTGAGCTGCCGCCC...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCAAGGGGCCATGTAGTTaGAGGACTCGATGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRKGPCS*RTRCLH
Trigger: ATGCAGACATCGAGTCCTCCAACTACATGGCCCCTT...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAAGAACTGCTCGTTCATaGGCAGCTCTGGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGRTARS*AALGKG
Trigger: CCCCTTACCCAGAGCTGCCCATGAACGAGCAGTTCT...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGCAGGTGCTGGAGTGGTaGGCTGCAGGAGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVQVLEW*AAGGDL
Trigger: GAGATCACCTCCTGCAGCCCACCACTCCAGCACCTG...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGGCACAGGTGCTGGAGTaGTGGGCTGCAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGAQVLE*WAAGGD
Trigger: ATCACCTCCTGCAGCCCACCACTCCAGCACCTGTGC...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCCCACTCTCCCTCCTTaGACCAACTCTGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGPTLPP*TNSGDP
Trigger: GGGATCCCCAGAGTTGGTCCAAGGAGGGAGAGTGGG...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CAA 72 bp AGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTaGCTATGGCTGCGTGTGCTCCAAGTGCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RTDGPEGQGHRH*LWLRVLQVPWA
Trigger: TGCCCAGGGCACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GATGGTCATTCACACTCTCCGTCACATTGCAGGTGTAGGTCCCCGAGTCTTCTACTGGCCCCGGGGGTGTaGCGACCAGGCCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: DGHSHSPSHCRCRSPSLLLAPGV*RPGPER
Trigger: TCTCTCAGGGCCTGGTCGTCACACCCCCGGGGCCAG...TAGAAGACTCGGGGACCTACACCTGCAATGTGACGGAGAGTGTGAATGACCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp CATATCCAAGAGGAAGTCAGTCACCGGCTCCACCAGCCGCCCACTTTCTTTGCGCCACACCACCGGAGCTaGACCCGAGCAGGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: HIQEEVSHRLHQPPTFFAPHHRS*TRAGQN
Trigger: GTTCTGACCTGCTCGGGTTCAGCTCCGGTGGTGTGG...CGCAAAGAAAGTGGGCGGCTGGTGGAGCCGGTGACTGACTTCCTCTTGGATATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp ATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCGGGTGCGGTTGTCTTTaGACCACAGGACAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: IHVLQTQCAHHLKLLLLLGCGCL*TTGQWA
Trigger: CGCCCACTGTCCTGTGGTTCAAAGACAACCGCACCC...GAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACAACCAGTGTCAGCTCTaGCACATACCGGGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNNQCQL*HIPGLR
Trigger: TCGGAGACCCGGTATGTGTCAGAGCTGACACTGGTT...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTCTCGGACAGGGACATTaGTCTGTAGCTGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSLGQGH*SVAGRR
Trigger: TCTCCTTCCAGCTACAGATCAATGTCCCTGTCCGAG...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGCAGGGCCAGGATGGCTaGGATCACCACCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKQGQDG*DHHHLK
Trigger: TTTAAGGTGGTGGTGATCTCAGCCATCCTGGCCCTG...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTCCCAGCACTTCTGCATaGTCTCATAGATCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSPSTSA*SHRSRR
Trigger: CCGACGAGATCTATGAGATCATGCAGAAGTGCTGGG...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGACCCAGCACTTCTGCATaGTCTCATAGATCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGPSTSA*SHRSRR
Trigger: CCGACGAGATCTATGAGATCATGCAGAAGTGCTGGG...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTTGGTTGAGGAGGTGTTaGCTTCATTCAGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSWLRRC*LHSGWS
Trigger: GCTCCACCCTGAATGAAGTCAACACCTCCTCAACCA...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTATAGGGGACAGGCAGTaGAACGTCCCCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSIGDRQ*NVPFLL
Trigger: GAGAAGAAAGGGGACGTTGCACTGCCTGTCCCCTAT...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACCAGCAAATTGTAGTGTaGCCACCTCTCCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNQQIVV*PPLPGA
Trigger: GGCTCCTGGGAGAGGTGGGCACACTACAATTTGCTG...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCGGCAGGGTCTCCGACACGTTaGGCGTGGACAGGGCGATTT +
Preference number: 4 (lower is better)
Translates to: QEGVFVAVQVVHQVSVAAGSPTR*AWTGRF
Trigger: AAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCC...TGCCGCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CACCAGCCGCCCACTTTCTTTGCGGGGGTATGTCCACTCGAAGTTGACCACCTCGTAGTGGCCAGCCTCTaGCACCTTCACGCGAACCAG +
Preference number: 4 (lower is better)
Translates to: HQPPTFFAGVCPLEVDHLVVASL*HLHANQ
Trigger: CTGGTTCGCGTGAAGGTGGCAGAGGCTGGCCACTAC...GAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAGTGGGCGGCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGACCACCTCAAACTCCTaGTCCTCCTCCCAGTACGTC +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKTTSNS*SSSQYV
Trigger: GACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGT...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCCCAGTACGTCACGTTAACCACGATGACCTCCTaGGTGTCCTGGCCCACAGCG +
Preference number: 4 (lower is better)
Translates to: RSVLTTSNSCSSSQYVTLTTMTS*VSWPTA
Trigger: CGCTGTGGGCCAGGACACGCAGGAGGTCATCGTGGT...TAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp ATACCGGGTCTCCGACACGTTGCGCGTGGACAGGGCGATTTCGCCAGCGCTGGAGGAAGGTGTGTTTGTTaGGGTGCAGGTAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: IPGLRHVARGQGDFASAGGRCVC*GAGSPP
Trigger: TGGTGGACTACCTGCACCGCAACAAACACACCTTCC...TCCAGCGCTGGCGAAATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGAGGGACACAGGCACTTaGTATGGCTGCGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVRDTGT*YGCVCS
Trigger: GGAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCT...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGCATTCTCATCACAGATaGGGGGCCCGTCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVHSHHR*GARLAF
Trigger: GAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATG...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGGCAATGCAGGGTTGGTaGCCAGAGGGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVAMQGW*PEGLSF
Trigger: GAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCACCAGAGGGGCCGCCCTaGGTCTGGCTGTCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILAPEGPP*VWLSAL
Trigger: CAACGCAGACAGCCAGACCCAGGGCGGCCCCTCTGG...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAAAGGACAGGCAGGACTaGTGCAGGCTCCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAAKDRQD*CRLLKA
Trigger: AGCCTTCAGGAGCCTGCACCAGTCCTGCCTGTCCTT...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATCACAGTTCCAGGCTCTaGACAGTCACCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IDLVGGMGRLGHAVTPFDHSSRL*TVTPSR
Trigger: CCTGGAGGGGGTGACTGTCCAGAGCCTGGAACTGTG...ATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGGCCCACGGTGGGATCTaGCACAAAGATGTAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGAHGGI*HKDVEP
Trigger: CGGCTCTACATCTTTGTGCCAGATCCCACCGTGGGC...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCCCACCAGGGCCAGGATaGCTGAGATCACCACCACCT +
Preference number: 4 (lower is better)
Translates to: IHVLQTQCAHHLKLLLLLPPGPG*LRSPPP
Trigger: AGGTGGTGGTGATCTCAGCCATCCTGGCCCTGGTGG...GAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGCGGCCACTTTCATCGTaGCCTGAGAATGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGRPLSS*PENGSG
Trigger: GCCTGAGCCATTCTCAGGCCACGATGAAAGTGGCCG...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAAGATGGGTCCTCCTTTaGTGCAGGCCCCCAACAGGT +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAARWVLL*CRPPTG
Trigger: ACCTGTTGGGGGCCTGCACCAAAGGAGGACCCATCT...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTTGTAGAGCTCCGCGCTaGGCGGGCGGCGCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMACRAPR*AGGACR
Trigger: CCGACAAGCGCCGCCCGCCCAGCGCGGAGCTCTACA...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCGGCACCTGGGACCGAAGGATaGCTGGGTGGTCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: QEGVFVAVQVVHQVSVAAPGTEG*LGGHSS
Trigger: TGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGG...TGCCGCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACTATAGAGGACGGAGCTaGTGTCCAGGGGAGATCGGA +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNYRGRS*CPGEIG
Trigger: TCCGATCTCCCCTGGACACCAGCTCCGTCCTCTATA...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGCAACTGTTCCAGCTCTaGCTCCGGCTCCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: VVTLIGLHGSIEDGAGVQQLFQL*LRLHLE
Trigger: CTCCAGGTGGAGCCGGAGCCAGAGCTGGAACAGTTG...CTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTTCCTTGGACCAACTCTaGGGATCCCAGGGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSSLDQL*GSQGSK
Trigger: CTTACTTCCCTGGGATCCCCAGAGTTGGTCCAAGGA...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CAA 72 bp TCCAGGGGGCTGTCACAGGAGATGGTTGAGGAGGTGTaGACTTCATTCAGGGTGGAGCTGGCTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRGLSQEMVEEV*TSFRVELARLG
Trigger: CCCCAGCCTAGCCAGCTCCACCCTGAATGAAGTCAACACCTCCTCAACCATCTCCTGTGACAGCCCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp CACCAGCCGCCCACTTTCTTTGCGGGGGTATGTCCACTCGAAGTTGACCACCTCCACGTGGACACCTTTTaGGGTCTCTGCAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: HQPPTFFAGVCPLEVDHLHVDTF*GLCRQT
Trigger: GGTCTGCCTGCAGAGACCTCAAAAGGTGTCCACGTG...GAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAGTGGGCGGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp CAGCTGCATGGGGTCCACGTAGATGTACTCATGGCCGTCAGAGCTCACAGACTCTGGCCACCTGGTAGCTaGAGCCCACGAGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: QLHGVHVDVLMAVRAHRLWPPGS*SPRGPC
Trigger: ACATGGACCTCGTGGGCTTCAGCTACCAGGTGGCCA...GAGTCTGTGAGCTCTGACGGCCATGAGTACATCTACGTGGACCCCATGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACTCCCCTTTCTTCTCGTaGAGTGTCACCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNSPFFS*SVTTSC
Trigger: ACAGCTGGTGGTGACACTGCACGAGAAGAAAGGGGA...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp ATCCTCATGGAAGGCCCGCATGGTGTAGTGGCCAGCCTCTGCCACCTTCACGCGCTCGTTGATCAAAGTTaGTCGGCAGGTCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ILMEGPHGVVASLCHLHALVDQS*SAGPLR
Trigger: CCTGAGAGGACCTGCCGAGCAACTTTGATCAACGAG...CGCGTGAAGGTGGCAGAGGCTGGCCACTACACCATGCGGGCCTTCCATGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCACCCAGGGAAGTAAGGTaGCAACCTGCAATGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAAPREVR*QPAMQG
Trigger: ACCCTGCATTGCAGGTTGGCACCTTACTTCCCTGGG...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACACGTTAGTCTCCAGCTaGCTCTCCTCTTCGGAACTG +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNTLVSS*LSSSEL
Trigger: CAGTTCCGAAGAGGAGAGCCAGCTGGAGACTAACGT...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCAGCAGCGCACCGACAGTaGCCGATCCACGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILAAAHRQ*PIHVLQ
Trigger: CTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGC...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTATGTAGAGCTCCGCGCTaGGCGGGCGGCGCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLCRAPR*AGGACR
Trigger: CCGACAAGCGCCGCCCGCCCAGCGCGGAGCTCTACA...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCGAAGGATGGCTGGGTaGTCACTCCTCAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGRRMAG*SLLRNS
Trigger: GGAGTTTCTGAGGAGTGACCACCCAGCCATCCTTCG...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCACCTCGGCACAGGTGCTaGAGTGGTGGGCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILAPRHRC*SGGLQE
Trigger: CTCCTGCAGCCCACCACTCCAGCACCTGTGCCGAGG...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp CACCAGCCGCCCACTTTCTTTGCGGGGGTATGTCCACTCGAAGTTGACCACCTCAACCAGTGTCAGCTCTaGCACATACCGGGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: HQPPTFFAGVCPLEVDHLNQCQL*HIPGLR
Trigger: TCGGAGACCCGGTATGTGTCAGAGCTGACACTGGTT...GAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAGTGGGCGGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTAGTGTGGCACCACGATaGCCTCCTGCGTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTSVAPR*PPACPG
Trigger: GCCAGGACACGCAGGAGGTCATCGTGGTGCCACACT...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp CACCAGCCGCCCACTTTCTTTGCGGGGGTATGTCCACTCGAAGTTGACCACCTCCAGGGCCAGGATGGCTaGGATCACCACCACCTTAAA +
Preference number: 4 (lower is better)
Translates to: HQPPTFFAGVCPLEVDHLQGQDG*DHHHLK
Trigger: TTTAAGGTGGTGGTGATCTCAGCCATCCTGGCCCTG...GAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAGTGGGCGGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp CACCAGCCGCCCACTTTCTTTGCGGGGGTATGTCCACTCGAAGTTGACCACCTCGGTCAGGCAGGGGGATaGTATAGTCGTTGTCACCCT +
Preference number: 4 (lower is better)
Translates to: HQPPTFFAGVCPLEVDHLGQAGG*YSRCHP
Trigger: AGGGTGACAACGACTATATCATCCCCCTGCCTGACC...GAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAGTGGGCGGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACAGTGTCCGGCTCCGATaGAGCTCAGCAAATTGTAGT +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNSVRLR*SSANCS
Trigger: ACTACAATTTGCTGAGCTGCATCGGAGCCGGACACT...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CTTGCTCATGTCCATGTAGCCACCGTCGCTCTCCCCGGTCAAGGACACATGGCTTCCGACATAAGGGCTTaGTTCTCACTGCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LAHVHVATVALPGQGHMASDIRA*FSLLRA
Trigger: AGCCCGCAGCAGTGAGAAGCAAGCCCTTATGTCGGA...AGCCATGTGTCCTTGACCGGGGAGAGCGACGGTGGCTACATGGACATGAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCGGCACGCTTGTCGGAGTGGTaGTGCAGGAAGGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: QEGVFVAVQVVHQVSVAARLSEW*CRKVCL
Trigger: CAAACACACCTTCCTGCAGCACCACTCCGACAAGCG...TGCCGCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCTCATCTGGACAAATGTaGAACCACCTGGAATACTCT +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRSSGQM*NHLEYS
Trigger: AGAGTATTCCAGGTGGTTGCACATTTGTCCAGATGA...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTTTTGAGGGCCAGAGCTaGCATCGCACCCGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTFEGQS*HRTRKP
Trigger: CGGCTTCCGGGTGCGATGCCAGCTCTGGCCCTCAAA...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCGGCAGAGAAGGTGCCATCCTaGGCCTTGGCCATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QEGVFVAVQVVHQVSVAAEKVPS*ALAISC
Trigger: ACAGGAAATGGCCAAGGCCCAGGATGGCACCTTCTC...TGCCGCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGCCCTGTCCCCAATGGTaGTTTTGCAGATGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKPCPQW*FCRCSF
Trigger: GAAGCTACATCTGCAAAACCACCATTGGGGACAGGG...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCCTCCCTGTCCCCAATaGTGGTTTTGCAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGPPCPQ*WFCRCS
Trigger: GCTACATCTGCAAAACCACCATTGGGGACAGGGAGG...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCTGCAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCAGCTGGAAGGAGAGCTaGACCTCAGCATCCTCATGG +
Preference number: 4 (lower is better)
Translates to: AAGRCVCCGAGSPPGLRSSWKES*TSASSW
Trigger: CCATGAGGATGCTGAGGTCCAGCTCTCCTTCCAGCT...GCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTCAGATGATGTTCGGCTaGGGCATGCCCCGGCCACGA +
Preference number: 4 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTQMMFG*GMPRPR
Trigger: TCGTGGCCGGGGCATGCCCCAGCCGAACATCATCTG...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTTGTTCCCCAGCAGCGTaGGCGGCAGCTCACGTGGAC +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGCSPAA*AAAHVD
Trigger: GTCCACGTGAGCTGCCGCCCACGCTGCTGGGGAACA...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CTTTCTTTGCGGGGGTATGTCCACTCGAAGTTGACCACCTCATTCCCGATCACATGTTCCCCAGCAGCGTaGGCGGCAGCTCACGTGGAC +
Preference number: 4 (lower is better)
Translates to: LSLRGYVHSKLTTSFPITCSPAA*AAAHVD
Trigger: GTCCACGTGAGCTGCCGCCCACGCTGCTGGGGAACA...TGTGATCGGGAATGAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCAGCGGCAGCTCCCACGTaGAGTCATAGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILAAAAPT*SHRAAA
Trigger: TGCAGCTGCCCTATGACTCCACGTGGGAGCTGCCGC...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCACGTTGTCACCCTCATTaGGCTGCACGGCAGTATAGA +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAARCHPH*AARQYR
Trigger: TCTATACTGCCGTGCAGCCCAATGAGGGTGACAACG...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTGGCTCCGGCTCCACCTaGAGCTCAAGCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGGSGST*SSSWGS
Trigger: AGAGCCCCAGCTTGAGCTCCAGGTGGAGCCGGAGCC...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGCTCTTCCCTAGCTCCTaGGTGGATAAAAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGLFPSS*VDKSAR
Trigger: CCTCGCACTTTTATCCACCCAGGAGCTAGGGAAGAG...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GATGGTCATTCACACTCTCCGTCACATTGCAGGTGTAGGTCCCCGAGTCTTCTAACAGCAGCTCGCCTTTaGGGGCCAGAGCTGGCATCG +
Preference number: 4 (lower is better)
Translates to: DGHSHSPSHCRCRSPSLLTAARL*GPELAS
Trigger: CGATGCCAGCTCTGGCCCTCAAAGGCGAGCTGCTGT...TAGAAGACTCGGGGACCTACACCTGCAATGTGACGGAGAGTGTGAATGACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAATGTCCACTCGAAGTTaGCCACCTCATTCCCGATCA +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAAMSTRS*PPHSRS
Trigger: TGATCGGGAATGAGGTGGTCAACTTCGAGTGGACAT...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACATGGCCTTTTCATCCTaGTGGTCATTCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNMAFSS*WSFTLS
Trigger: GGAGAGTGTGAATGACCATCAGGATGAAAAGGCCAT...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAAGGCCCCCAACAGGTTaGCCACGTTCAGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLRPPTG*PRSGGA
Trigger: GGCCCCACCTGAACGTGGTCAACCTGTTGGGGGCCT...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTCGATGTCTGCATATTTaGCGTCTCCTTTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSRCLHI*RLLSCP
Trigger: TGGACATGAAAGGAGACGTCAAATATGCAGACATCG...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp TGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCTGCGGTAACCCCGTTTaGTGGCATTGTAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: WPIHVLQTQCAHHLKLLLCGNPV*WHCRTA
Trigger: AGCAGTTCTACAATGCCATCAAACGGGGTTACCGCA...GAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGTTGTCGGAGTGGTGCTaGAGGAAGGTGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGLSEWC*RKVCLL
Trigger: CAACAAACACACCTTCCTGCAGCACCACTCCGACAA...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTCAGGAAGCTATCCTCTaGTTCCGCCCGAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFQEAIL*FRPRRR
Trigger: CCTGCGCCTCGGGCGGAAGCAGAGGATAGCTTCCTG...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCATGGGGTCCACGTAGATGTACTCATGGCCGTCAGAGCTCACAGACTCAATCAATTGAGGACAAGCTCTaGCCCCGGGGGTGTGACGAC +
Preference number: 4 (lower is better)
Translates to: AWGPRRCTHGRQSSQTQSIEDKL*PRGCDD
Trigger: GTCGTCACACCCCCGGGGCCAGAGCTTGTCCTCAAT...TGATTGAGTCTGTGAGCTCTGACGGCCATGAGTACATCTACGTGGACCCCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGCCTCCCTGTCCCCAATaGTGGTTTTGCAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: GMGRLGHAVTPFDGIVELPPCPQ*WFCRCS
Trigger: GCTACATCTGCAAAACCACCATTGGGGACAGGGAGG...CAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CATATCCAAGAGGAAGTCAGTCACCGGCTCCACCAGCCGCCCACTTTCTTTGCGCTTCTAACTCGGCACTaGGGATGTGCAGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: HIQEEVSHRLHQPPTFFALLTRH*GCAGWS
Trigger: GCTCCATCCTGCACATCCCCAGTGCCGAGTTAGAAG...CGCAAAGAAAGTGGGCGGCTGGTGGAGCCGGTGACTGACTTCCTCTTGGATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TATAGTCGTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGGGGCGGCAGCTCACGTaGACACCTTTTGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: YSRCHPHWAARQYRGRSWGRQLT*TPFEVS
Trigger: AGAGACCTCAAAAGGTGTCCACGTGAGCTGCCGCCC...CCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAACGACTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGCTCGTTAAAGGGCAAGGAGTGTaGCACCACGATGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: GRLGHAVTPFDGIVELLVKGQGV*HHDDLL
Trigger: CAGGAGGTCATCGTGGTGCCACACTCCTTGCCCTTT...AACGAGCAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTGCGGCAGCTCCCACGTaGAGTCATAGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMAAAAPT*SHRAAA
Trigger: TGCAGCTGCCCTATGACTCCACGTGGGAGCTGCCGC...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGCTTTCATGTCCAGCATaGGCACATAGTCCACCGACT +
Preference number: 4 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGLSCPA*AHSPPT
Trigger: AGTCGGTGGACTATGTGCCCATGCTGGACATGAAAG...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCCCAGTACGTCACGTTAGGACCGAAGGATGGCTaGGTGGTCACTCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: RSVLTTSNSCSSSQYVTLGPKDG*VVTPQK
Trigger: TTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCC...TAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GCATGGGGTCCACGTAGATGTACTCATGGCCGTCAGAGCTCACAGACTCAATCACATTCAGGGTGGAGCTaGCTAGGCTGGGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: AWGPRRCTHGRQSSQTQSHSGWS*LGWGNP
Trigger: AGGGTTCCCCCAGCCTAGCCAGCTCCACCCTGAATG...TGATTGAGTCTGTGAGCTCTGACGGCCATGAGTACATCTACGTGGACCCCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTGCCAGCCCCAGGGTTTaGGGCACAACACGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGASPRV*GTTRQE
Trigger: CTCCTGACGTGTTGTGCCCCAAACCCTGGGGCTGGC...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCGAGAATCCTAGATTCTaGGTCATCAAGCCTAACTTT +
Preference number: 4 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRENPRF*VIKPNF
Trigger: AAAGTTAGGCTTGATGACCCAGAATCTAGGATTCTC...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCAAAGTCACAGATCTTaGCCAGCTTGCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGQSHRS*PACLHR
Trigger: TCTGTGAAGGCAAGCTGGTCAAGATCTGTGACTTTG...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGCTTGGGGTACCCATCTaGAGCTTCTTGTCTTTTACA +
Preference number: 4 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKLGVPI*SFLSFT
Trigger: TGTAAAAGACAAGAAGCTTCAGATGGGTACCCCAAG...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTGGGGCAGCTGGTGGGTaGGGGGCAAACCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCGAAGG*GANLQS
Trigger: GCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCC...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGGGAAGTCCTCCTTACTaGCCTCTCCCAGTTATCAGA +
Preference number: 4 (lower is better)
Translates to: GMGRLGHAVTPFDGIVELGSPPY*PLPVIR
Trigger: TCTGATAACTGGGAGAGGGCAGTAAGGAGGACTTCC...CAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCAGGGAGTCATTGTGGGTaGAAAAGTATTCTCCCGTGT +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAAGSHCG*KSILPC
Trigger: ACACGGGAGAATACTTTTGCACCCACAATGACTCCC...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GGGTGCGTCCCAGCACAAGCTGGTCCCGCGGCAGCTCCCACGTGGAGTCATAGGTTAAAGGCAAAAAGGTaGTGCCTTTGGAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: GCVPAQAGPAAAPTWSHRLKAKR*CLWRCN
Trigger: ATTACATCTCCAAAGGCAGCACCTTTTTGCCTTTAA...CCTATGACTCCACGTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACGCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCACTAAGTCAAGGCCTGTaGAGCTGTGTTCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAALSQGL*SCVLET
Trigger: AGTCTCAAGAACACAGCTGCACAGGCCTTGACTTAG...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGGGAGGTGATCTCATTTaGCCTCTTTGTCCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVGGDLI*PLCPFC
Trigger: GCAAAAGGGACAAAGAGGGCAAATGAGATCACCTCC...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAAGACCTCGGCACAGGTaGTGGAGTGGTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLRPRHR*WSGGLQ
Trigger: CTGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCT...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCAGCTGCTGATGGCTTCTaGTGTGGGCACAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILAAADGF*CGHSSR
Trigger: CCTGGAACTGTGCCCACACCAGAAGCCATCAGCAGC...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ACTCATGGCCGTCAGAGCTCACAGACTCAATCACCTTCCATCGGATCTCGTAACCTTGGCCATTTCCTGTaGGGGCTCCTGGGACATCCG +
Preference number: 4 (lower is better)
Translates to: THGRQSSQTQSPSIGSRNLGHFL*GLLGHP
Trigger: CGGATGTCCCAGGAGCCCCCACAGGAAATGGCCAAG...GTTACGAGATCCGATGGAAGGTGATTGAGTCTGTGAGCTCTGACGGCCATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CGGCAGCTCACGTGGACACCTTTTGAGGTCTCTGCAGGCAGACCAGATGATGTTGGAGGAAGCCCACGGTaGGATCTGGCACAAAGATGT +
Preference number: 4 (lower is better)
Translates to: RQLTWTPFEVSAGRPDDVGGSPR*DLAQRC
Trigger: ACATCTTTGTGCCAGATCCCACCGTGGGCTTCCTCC...AACATCATCTGGTCTGCCTGCAGAGACCTCAAAAGGTGTCCACGTGAGCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CGACAGTGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCACATTGATCTGTAGCTaGAAGGAGAGCTGGACCTCA +
Preference number: 4 (lower is better)
Translates to: RQWPIHVLQTQCAHHLKLTLICS*KESWTS
Trigger: TGAGGTCCAGCTCTCCTTCCAGCTACAGATCAATGT...GAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCACTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GTAAGGGGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTGCAGCGCACCGACAGTaGCCGATCCACGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VRGHVVGGLDVCIFDVSFAAHRQ*PIHVLQ
Trigger: CTGCAGCACGTGGATCGGCCACTGTCGGTGCGCTGC...AAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCCCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCATCGGATCTCGTAACGTaGCTTCTTCTGCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SILSSTQTSAQVLEWWAASDLVT*LLLPKH
Trigger: ATGCTTTGGCAGAAGAAGCCACGTTACGAGATCCGA...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTCCGGTCAAGGACACATaGCTGGGCAGGGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCPVKDT*LGRGSP
Trigger: TGGGCTCCCCCTGCCCAGCCATGTGTCCTTGACCGG...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTGGGGGAACCCTCCAGTaGGCCCTCGTCAGCAACCTC +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCGGTLQ*ALVSNL
Trigger: GAGGTTGCTGACGAGGGCCCACTGGAGGGTTCCCCC...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTCTGATAAGGGCAGCCTaGCTGACAGGAAGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGLIRAA*LTGSPV
Trigger: GACCGGGCTTCCTGTCAGCCAGGCTGCCCTTATCAG...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAGACTTGCTGGGGGCCTaGGGAAGGGGCATGGTTCCT +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLDLLGA*GRGMVP
Trigger: AGGAACCATGCCCCTTCCCCAGGCCCCCAGCAAGTC...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAGTCTTCCCATGTCCCTaGGGCAGCTGCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLVFPCP*GSCWGL
Trigger: AAGCCCCCAGCAGCTGCCCCAGGGACATGGGAAGAC...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTCCACACCACCGGAGCTaGACCCGAGCAGGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCPHHRS*TRAGQN
Trigger: GTTCTGACCTGCTCGGGTTCAGCTCCGGTGGTGTGG...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCAGCACTGGAGACTCGTTaGTCAAAGTTGCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILAALETR*SKLLGR
Trigger: CCTGCCGAGCAACTTTGATCAACGAGTCTCCAGTGC...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTAATTCGAGTCCCGCATaGTGTCTCGAGCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTNSSPA*CLEPGQ
Trigger: TTGGCCTGGCTCGAGACATCATGCGGGACTCGAATT...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp AGCTCCGACATAAGGGCTTGCTTCTCACTGCTGCGGGCTGTGGATTTAAGCATCTGGATGACACTCTGCTaGGCATCAGGCCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SSDIRACFSLLRAVDLSIWMTLC*ASGQKG
Trigger: CCCTTTCTGGCCTGATGCTCAGCAGAGTGTCATCCA...GATGCTTAAATCCACAGCCCGCAGCAGTGAGAAGCAAGCCCTTATGTCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp GGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGCCCCAATGGTGGTTTTaGAGATGTAGCTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GMGRLGHAVTPFDGIVELPQWWF*RCSFCP
Trigger: AGGACAGAAGCTACATCTGCAAAACCACCATTGGGG...CAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTTGGCGGACCACAGTCTaGACTGCGTTCACAGAGACG +
Preference number: 4 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMAWRTTV*TAFTET
Trigger: CGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCA...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTATCGGCACTGGGGATGTaGAGGATGGAGCGGATGTGG +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLSALGM*RMERMW
Trigger: CCACATCCGCTCCATCCTGCACATCCCCAGTGCCGA...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp AGCTCCGACATAAGGGCTTGCTTCTCACTGCTGCGGGCTGTGGATTTAAGCATCGCTGCAGACGCAGTGTaGTCACCACCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: SSDIRACFSLLRAVDLSIAADAV*SPPQTP
Trigger: AGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGC...GATGCTTAAATCCACAGCCCGCAGCAGTGAGAAGCAAGCCCTTATGTCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCATCCGACATAAGGGCTTaGTTCTCACTGCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILASDIRA*FSLLRA
Trigger: AGCCCGCAGCAGTGAGAAGCAAGCCCTTATGTCGGA...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCACGCTTGTCGGAGTGGTaGTGCAGGAAGGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILARLSEW*CRKVCL
Trigger: CAAACACACCTTCCTGCAGCACCACTCCGACAAGCG...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCAGAGAAGGTGCCATCCTaGGCCTTGGCCATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILAEKVPS*ALAISC
Trigger: ACAGGAAATGGCCAAGGCCCAGGATGGCACCTTCTC...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CAGCTGCATGGGGTCCACGTAGATGTACTCATGGCCGTCAGAGCTCACAGACTCCCACGGGAGTCATTGTaGGTGCAAAAGTATTCTCCC +
Preference number: 4 (lower is better)
Translates to: QLHGVHVDVLMAVRAHRLPRESL*VQKYSP
Trigger: GGGAGAATACTTTTGCACCCACAATGACTCCCGTGG...GAGTCTGTGAGCTCTGACGGCCATGAGTACATCTACGTGGACCCCATGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp CTTTCTTTGCGGGGGTATGTCCACTCGAAGTTGACCACCTCATTCCCGATCACATCCCCACTGTCAGGGTaGCTCTCACTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSLRGYVHSKLTTSFPITSPLSG*LSLSSS
Trigger: GCTGGAGCTAAGTGAGAGCCACCCTGACAGTGGGGA...TGTGATCGGGAATGAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp ATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATTCGGATCTCGTAACGTaGCTTCTTCTGCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: IDLVGGMGRLGHAVTPFDSDLVT*LLLPKH
Trigger: ATGCTTTGGCAGAAGAAGCCACGTTACGAGATCCGA...ATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTGTTCATGGGCAGCTCTaGGTAAGGGGTGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGVHGQL*VRGATQ
Trigger: TTGGGTGGCACCCCTTACCCAGAGCTGCCCATGAAC...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ACTCATGGCCGTCAGAGCTCACAGACTCAATCACCTTCCATCGGATCTCGTAACGTTCATGGGCAGCTCTaGGTAAGGGGTGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: THGRQSSQTQSPSIGSRNVHGQL*VRGATQ
Trigger: TTGGGTGGCACCCCTTACCCAGAGCTGCCCATGAAC...GTTACGAGATCCGATGGAAGGTGATTGAGTCTGTGAGCTCTGACGGCCATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
3UTR CAA 72 bp CGCCCACTTTCTTTGCGGGGGTATGTCCACTCGAAGTaGACCACCTCATTCCCGATCACAATGCACATGAGG +
Preference number: 4 (lower is better)
Translates to: RPLSLRGYVHSK*TTSFPITMHMR
Trigger: CCTCATGTGCATTGTGATCGGGAATGAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAGTGGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAACTGGTGCAGGCTCCTaGAGGCTCAGGAGAACAGAG +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLTGAGS*RLRRTE
Trigger: CTCTGTTCTCCTGAGCCTTCAGGAGCCTGCACCAGT...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTACACGTGGACACCTTTTaGGGTCTCTGCAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLHVDTF*GLCRQT
Trigger: GGTCTGCCTGCAGAGACCTCAAAAGGTGTCCACGTG...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGCGATGTCTGCATATTTaGCGTCTCCTTTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: VVTLIGLHGSIEDGAGVQRCLHI*RLLSCP
Trigger: TGGACATGAAAGGAGACGTCAAATATGCAGACATCG...CTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTTGGCCACCTGGTAGCTaGAGCCCACGAGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCWPPGS*SPRGPC
Trigger: ACATGGACCTCGTGGGCTTCAGCTACCAGGTGGCCA...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp CTTTCTTTGCGGGGGTATGTCCACTCGAAGTTGACCACCTCATTCCCGATCACAAATTCGAGTCCCGCATaGTGTCTCGAGCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSLRGYVHSKLTTSFPITNSSPA*CLEPGQ
Trigger: TTGGCCTGGCTCGAGACATCATGCGGGACTCGAATT...TGTGATCGGGAATGAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp GCATGGGGTCCACGTAGATGTACTCATGGCCGTCAGAGCTCACAGACTCAATCATGGTTGAGGAGGTGTTaGCTTCATTCAGGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AWGPRRCTHGRQSSQTQSWLRRC*LHSGWS
Trigger: GCTCCACCCTGAATGAAGTCAACACCTCCTCAACCA...TGATTGAGTCTGTGAGCTCTGACGGCCATGAGTACATCTACGTGGACCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp GGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGGCATTGTAGAACTGCTCGTTGGGAGTCATTGTGGGTaGAAAAGTATTCTCCCGTGT +
Preference number: 4 (lower is better)
Translates to: GRLGHAVTPFDGIVELLVGSHCG*KSILPC
Trigger: ACACGGGAGAATACTTTTGCACCCACAATGACTCCC...AACGAGCAGTTCTACAATGCCATCAAACGGGGTTACCGCATGGCCCAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTCACTCTCCGTCACATTaGAGGTGTAGGTCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFHSPSH*RCRSPS
Trigger: ACTCGGGGACCTACACCTGCAATGTGACGGAGAGTG...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCACTCGTTGATCAAAGTTaGTCGGCAGGTCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILALVDQS*SAGPLR
Trigger: CCTGAGAGGACCTGCCGAGCAACTTTGATCAACGAG...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGAAGGCAAAAAGGTGCTaGCTTTGGAGATGTAATTCG +
Preference number: 4 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGKAKRC*LWRCNS
Trigger: CGAATTACATCTCCAAAGGCAGCACCTTTTTGCCTT...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTACCTCTTTGTCCCTTTTaGCCAGGATACCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLPLCPF*PGYPRR
Trigger: CCTCCGGGGGTATCCTGGGCAAAAGGGACAAAGAGG...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTCTTGGCCATTTCCTGTaGGGGCTCCTGGGACATCCG +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCLGHFL*GLLGHP
Trigger: CGGATGTCCCAGGAGCCCCCACAGGAAATGGCCAAG...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTGTGATGTTCTCACCCTaGCGGACCACAGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMAVMFSP*RTTVCT
Trigger: AGTGCAGACTGTGGTCCGCCAGGGTGAGAACATCAC...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp ACTCATGGCCGTCAGAGCTCACAGACTCAATCACCTTCCATCGGATCTCGTAACTGGGGATGTGCAGGATaGAGCGGATGTGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: THGRQSSQTQSPSIGSRNWGCAG*SGCGKA
Trigger: TGCCTTACCACATCCGCTCCATCCTGCACATCCCCA...GTTACGAGATCCGATGGAAGGTGATTGAGTCTGTGAGCTCTGACGGCCATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTCATGTCCAGGACAGTGGGCGGTaGGTAGGCCTCGAACACTAC +
Preference number: 4 (lower is better)
Translates to: GHVVGGLDVCIFDVSFHVQDSGR*VGLEHY
Trigger: GTAGTGTTCGAGGCCTACCCACCGCCCACTGTCCTG...GACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTCGGCGCTTGTCGGAGTaGTGCTGCAGGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCRRLSE*CCRKVC
Trigger: ACACACCTTCCTGCAGCACCACTCCGACAAGCGCCG...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCGGATCTCGTAACGTGGCTTCTTCTGCCAAAGCATGATGAGGATGATAAGGGACGGCGCTTGTCGGAGTaGTGCTGCAGGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SDLVTWLLLPKHDEDDKGRRLSE*CCRKVC
Trigger: ACACACCTTCCTGCAGCACCACTCCGACAAGCGCCG...TCCCTTATCATCCTCATCATGCTTTGGCAGAAGAAGCCACGTTACGAGATCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTTGTGGACGCAGTTCTTaGAGGCCAGAAACTCCATGC +
Preference number: 4 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTCGRSS*RPETPC
Trigger: GCATGGAGTTTCTGGCCTCCAAGAACTGCGTCCACA...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTCGAAGGATGGCTGGGTaGTCACTCCTCAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFRRMAG*SLLRNS
Trigger: GGAGTTTCTGAGGAGTGACCACCCAGCCATCCTTCG...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTGGACCGAAGGATGGCTaGGTGGTCACTCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGGPKDG*VVTPQK
Trigger: TTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCC...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTTATAGAGGACGGAGCTaGTGTCCAGGGGAGATCGGA +
Preference number: 4 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMAYRGRS*CPGEIG
Trigger: TCCGATCTCCCCTGGACACCAGCTCCGTCCTCTATA...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTTCCCTAGCTCCTGGGTaGATAAAAGTGCGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTSLAPG*IKVRGE
Trigger: CTCTCCTCGCACTTTTATCCACCCAGGAGCTAGGGA...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTCACAGGCACTTGCTATaGCTGCGTGTGCTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGHRHLL*LRVLQV
Trigger: CACTTGGAGCACACGCAGCCATAGCAAGTGCCTGTG...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAGCCAGGGCCATATACTaGCACACACACGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLARAIY*HTHVAT
Trigger: AGTGGCCACGTGTGTGTGCCAGTATATGGCCCTGGC...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GATGGTCATTCACACTCTCCGTCACATTGCAGGTGTAGGTCCCCGAGTCTTCTATCTCCTCCTCCTTGTTaGTCTCCTCTCTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: DGHSHSPSHCRCRSPSLLSPPPC*SPLWLQ
Trigger: TTGGAGCCAGAGAGGAGATCAACAAGGAGGAGGAGA...TAGAAGACTCGGGGACCTACACCTGCAATGTGACGGAGAGTGTGAATGACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAGGTCAGGCAGGGGGATaGTATAGTCGTTGTCACCCT +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLGQAGG*YSRCHP
Trigger: AGGGTGACAACGACTATATCATCCCCCTGCCTGACC...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCAGGAAGTCCTCCTTACTaGCCTCTCCCAGTTATCAGA +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILAGSPPY*PLPVIR
Trigger: TCTGATAACTGGGAGAGGGCAGTAAGGAGGACTTCC...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTTCCCCTTTCTTCTCGTaGAGTGTCACCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMASPFFS*SVTTSC
Trigger: ACAGCTGGTGGTGACACTGCACGAGAAGAAAGGGGA...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAGCTGCAGACGCAGTGTaGTCACCACCTCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLAADAV*SPPQTP
Trigger: AGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGC...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp ATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCAAGGCAAAAAGGTGCTaGCTTTGGAGATGTAATTCG +
Preference number: 4 (lower is better)
Translates to: IHVLQTQCAHHLKLLLLLKAKRC*LWRCNS
Trigger: CGAATTACATCTCCAAAGGCAGCACCTTTTTGCCTT...GAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTCCACGGGAGTCATTGTaGGTGCAAAAGTATTCTCCC +
Preference number: 4 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTPRESL*VQKYSP
Trigger: GGGAGAATACTTTTGCACCCACAATGACTCCCGTGG...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GTAAGGGGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTGCCCACGGTGGGATCTaGCACAAAGATGTAGAGCCG +
Preference number: 4 (lower is better)
Translates to: VRGHVVGGLDVCIFDVSFAHGGI*HKDVEP
Trigger: CGGCTCTACATCTTTGTGCCAGATCCCACCGTGGGC...AAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCCCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAGTGATGTTCTCACCCTaGCGGACCACAGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLVMFSP*RTTVCT
Trigger: AGTGCAGACTGTGGTCCGCCAGGGTGAGAACATCAC...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTACTTCTAACTCGGCACTaGGGATGTGCAGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLLLTRH*GCAGWS
Trigger: GCTCCATCCTGCACATCCCCAGTGCCGAGTTAGAAG...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTTCCCCACTGTCAGGGTaGCTCTCACTTAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCSPLSG*LSLSSS
Trigger: GCTGGAGCTAAGTGAGAGCCACCCTGACAGTGGGGA...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GTAAGGGGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTAGATGGGTCCTCCTTTaGTGCAGGCCCCCAACAGGT +
Preference number: 4 (lower is better)
Translates to: VRGHVVGGLDVCIFDVSFRWVLL*CRPPTG
Trigger: ACCTGTTGGGGGCCTGCACCAAAGGAGGACCCATCT...AAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCCCCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACTCAAGGACACATGGCTaGGCAGGGGGAGCCCAACGG +
Preference number: 4 (lower is better)
Translates to: CLLQDITVLTVHSVFDADSRTHG*AGGAQR
Trigger: CCGTTGGGCTCCCCCTGCCCAGCCATGTGTCCTTGA...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAAGGGAACGCAGGGACTaGCATCATAGGGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLRERRD*HHREET
Trigger: AGTCTCCTCCCTATGATGCCAGTCCCTGCGTTCCCT...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTGTGAAAGAGGTCCCGTaGTCTTCCCATGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCVKEVP*SSHVPG
Trigger: CCCAGGGACATGGGAAGACCACGGGACCTCTTTCAC...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp AGCTCCGACATAAGGGCTTGCTTCTCACTGCTGCGGGCTGTGGATTTAAGCATCCAAAGTCACAGATCTTaGCCAGCTTGCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: SSDIRACFSLLRAVDLSIQSHRS*PACLHR
Trigger: TCTGTGAAGGCAAGCTGGTCAAGATCTGTGACTTTG...GATGCTTAAATCCACAGCCCGCAGCAGTGAGAAGCAAGCCCTTATGTCGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCAGTCACAGGAGATGGTTaGGGAGGTGTTGACTTCATT +
Preference number: 4 (lower is better)
Translates to: FLQSLIAGPMQSQGHILAVTGDG*GGVDFI
Trigger: AATGAAGTCAACACCTCCTCAACCATCTCCTGTGAC...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTTCTTTGGTACCGTATTaGGAACCCACTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGSLVPY*EPTLPP
Trigger: AGGAGGGAGAGTGGGTTCTCAATACGGTACCAAAGA...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp ACTCATGGCCGTCAGAGCTCACAGACTCAATCACCTTCCATCGGATCTCGTAACAGTGTCCGGCTCCGATaGAGCTCAGCAAATTGTAGT +
Preference number: 4 (lower is better)
Translates to: THGRQSSQTQSPSIGSRNSVRLR*SSANCS
Trigger: ACTACAATTTGCTGAGCTGCATCGGAGCCGGACACT...GTTACGAGATCCGATGGAAGGTGATTGAGTCTGTGAGCTCTGACGGCCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGTTAAAGGCAAAAAGGTaGTGCCTTTGGAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVLKAKR*CLWRCN
Trigger: ATTACATCTCCAAAGGCAGCACCTTTTTGCCTTTAA...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTTGGATGAGGCAACACTaGTCAAGGCTAGGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCWMRQH*SRLGPS
Trigger: GCTAGGGCCTAGCCTTGAGCAGTGTTGCCTCATCCA...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTTGTCACCACCAGCTGTaGGTCTGTTACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCCHHQL*VCYSAW
Trigger: CCATGCCGAGTAACAGACCCACAGCTGGTGGTGACA...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTAAAGGGCAAGGAGTGTaGCACCACGATGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCKGQGV*HHDDLL
Trigger: CAGGAGGTCATCGTGGTGCCACACTCCTTGCCCTTT...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTAAGGGGCCATGTAGTTaGAGGACTCGATGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMAKGPCS*RTRCLH
Trigger: ATGCAGACATCGAGTCCTCCAACTACATGGCCCCTT...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAAGAGACGTTGATGGATaGCACCTGGAGTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLRDVDG*HLESVD
Trigger: GTCTACAGACTCCAGGTGTCATCCATCAACGTCTCT...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GGCTGTGGATTTAAGCATCTTGACGGCCACTTTCATCGTGGCCTGAGAATGGCTATGGCCTTTTCATCCTaGTGGTCATTCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: GCGFKHLDGHFHRGLRMAMAFSS*WSFTLS
Trigger: GGAGAGTGTGAATGACCATCAGGATGAAAAGGCCAT...AGCCATTCTCAGGCCACGATGAAAGTGGCCGTCAAGATGCTTAAATCCACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR TCA 90 bp ACTCATGGCCGTCAGAGCTCACAGACTCAATCACCTTCCATCGGATCTCGTAACGTCACAGGAGATGGTTaGGGAGGTGTTGACTTCATT +
Preference number: 4 (lower is better)
Translates to: THGRQSSQTQSPSIGSRNVTGDG*GGVDFI
Trigger: AATGAAGTCAACACCTCCTCAACCATCTCCTGTGAC...GTTACGAGATCCGATGGAAGGTGATTGAGTCTGTGAGCTCTGACGGCCATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp TCGGATCTCGTAACGTGGCTTCTTCTGCCAAAGCATGATGAGGATGATAAGGGAATAGGGGACAGGCAGTaGAACGTCCCCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SDLVTWLLLPKHDEDDKGIGDRQ*NVPFLL
Trigger: GAGAAGAAAGGGGACGTTGCACTGCCTGTCCCCTAT...TCCCTTATCATCCTCATCATGCTTTGGCAGAAGAAGCCACGTTACGAGATCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAGACCACAGTCTGCACTaGGTTCACAGAGACGTTGAT +
Preference number: 4 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLDHSLH*VHRDVD
Trigger: ATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTC...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTGGAAGGTGTGTTTGTTaGGGTGCAGGTAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCGRCVC*GAGSPP
Trigger: TGGTGGACTACCTGCACCGCAACAAACACACCTTCC...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTACATTGATCTGTAGCTaGAAGGAGAGCTGGACCTCA +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGTLICS*KESWTS
Trigger: TGAGGTCCAGCTCTCCTTCCAGCTACAGATCAATGT...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTTGGCCTTGCTTCATCTaGACAAATGTGCAACCACCT +
Preference number: 4 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGWPCFI*TNVQPP
Trigger: AGGTGGTTGCACATTTGTCCAGATGAAGCAAGGCCA...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CAA 72 bp GCTGACCCCCAGGATGGAAGTTTAGGGTATATGGCCTaGCTTCATCTGGACAAATGTGCAACCACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ADPQDGSLGYMA*LHLDKCATTWN
Trigger: ATTCCAGGTGGTTGCACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTTGCGGTAACCCCGTTTaGTGGCATTGTAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCCGNPV*WHCRTA
Trigger: AGCAGTTCTACAATGCCATCAAACGGGGTTACCGCA...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp GGCCATGTAGTTGGAGGACTCGATGTCTGCATATTTGACGTCTCCTTTCATGTCTTGTCGGAGTGGTGCTaGAGGAAGGTGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: GHVVGGLDVCIFDVSFHVLSEWC*RKVCLL
Trigger: CAACAAACACACCTTCCTGCAGCACCACTCCGACAA...GACATGAAAGGAGACGTCAAATATGCAGACATCGAGTCCTCCAACTACATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR GCA 90 bp ATGGCTGGGTGGTCACTCCTCAGAAACTCCTCATCCACCTGCTGGTACTTCTTTGGAGGACTCGATGTCTaGATATTTGACGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: MAGWSLLRNSSSTCWYFFGGLDV*IFDVSF
Trigger: AAAGGAGACGTCAAATATGCAGACATCGAGTCCTCC...AAAGAAGTACCAGCAGGTGGATGAGGAGTTTCTGAGGAGTGACCACCCAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACAGCTGGAAGGAGAGCTaGACCTCAGCATCCTCATGG +
Preference number: 4 (lower is better)
Translates to: CLLQDITVLTVHSVFDADSWKES*TSASSW
Trigger: CCATGAGGATGCTGAGGTCCAGCTCTCCTTCCAGCT...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR TCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACAGAGTGGGTAACAGCTaGGTAGAAGGACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CLLQDITVLTVHSVFDADRVGNS*VEGQAG
Trigger: TCCTGCCTGTCCTTCTACTCAGCTGTTACCCACTCT...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp CTTTCTTTGCGGGGGTATGTCCACTCGAAGTTGACCACCTCATTCCCGATCACAGTCTGTTACTCGGCATaGAATGGTGATCTCAGTTAT +
Preference number: 4 (lower is better)
Translates to: LSLRGYVHSKLTTSFPITVCYSA*NGDLSY
Trigger: ATAACTGAGATCACCATTCCATGCCGAGTAACAGAC...TGTGATCGGGAATGAGGTGGTCAACTTCGAGTGGACATACCCCCGCAAAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTAGACTGGCTTTCTTCTaGATGAGGCAACACTGCTCA +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCRLAFF*MRQHCS
Trigger: TGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCT...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTAAAAGGTGCTGCCTTTaGAGATGTAATTCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCKRCCL*RCNSSP
Trigger: GGGACTCGAATTACATCTCCAAAGGCAGCACCTTTT...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TCGGATCTCGTAACGTGGCTTCTTCTGCCAAAGCATGATGAGGATGATAAGGGAAAAAGGTGCTGCCTTTaGAGATGTAATTCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SDLVTWLLLPKHDEDDKGKRCCL*RCNSSP
Trigger: GGGACTCGAATTACATCTCCAAAGGCAGCACCTTTT...TCCCTTATCATCCTCATCATGCTTTGGCAGAAGAAGCCACGTTACGAGATCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTCTAGACTCTGGTGGATaGATTAAGACTGAGGGTGAT +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCLDSGG*IKTEGD
Trigger: ATCACCCTCAGTCTTAATCCATCCACCAGAGTCTAG...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACCCCCAATGGTGGTTTTaGAGATGTAGCTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CLLQDITVLTVHSVFDADPQWWF*RCSFCP
Trigger: AGGACAGAAGCTACATCTGCAAAACCACCATTGGGG...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTGTCTGTTACTCGGCATaGAATGGTGATCTCAGTTAT +
Preference number: 4 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCVCYSA*NGDLSY
Trigger: ATAACTGAGATCACCATTCCATGCCGAGTAACAGAC...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACCTCTCACATCCTTCTTaGGGTACCCATCTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: CLLQDITVLTVHSVFDADLSHPS*GTHLKL
Trigger: AAGCTTCAGATGGGTACCCCAAGAAGGATGTGAGAG...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR GCA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACGGAGGACTCGATGTCTaGATATTTGACGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CLLQDITVLTVHSVFDADGGLDV*IFDVSF
Trigger: AAAGGAGACGTCAAATATGCAGACATCGAGTCCTCC...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
3UTR CAA 72 bp TTTGTAAACCTAGGTGATTATATCTTTGGTACCGTATaGAGAACCCACTCTCCCTCCTTGGACCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: FVNLGDYIFGTV*RTHSPSLDQLW
Trigger: CCAGAGTTGGTCCAAGGAGGGAGAGTGGGTTCTCAATACGGTACCAAAGATATAATCACCTAGGTTTACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTCTGGGCGGGCGGCGCTaGTCGGAGTGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSLGGRR*SEWCCR
Trigger: CCTGCAGCACCACTCCGACAAGCGCCGCCCGCCCAG...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCCCGTGCGGGGGCGTCTaGGCTACAACCCTGACTCCC +
Preference number: 5 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGPCGGV*ATTLTP
Trigger: GGGAGTCAGGGTTGTAGCCAAGACGCCCCCGCACGG...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGGGGAGATCGGAGGCCATTCCTGGCCCACAGCGTaGCGCAGCGTGCAGCGCACC +
Preference number: 5 (lower is better)
Translates to: AARQYRGRSWCPGEIGGHSWPTA*RSVQRT
Trigger: GGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGA...ATGGCCTCCGATCTCCCCTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp TCCTCTGCTTCCGCCCGAGGCGCAGGGCACCCCGAATCCGGCAACTGTTCCAGCTCAGCAACCTCGGGTTaGGGGTCAGGCAGGGGGATG +
Preference number: 5 (lower is better)
Translates to: SSASARGAGHPESGNCSSSATSG*GSGRGM
Trigger: CATCCCCCTGCCTGACCCCAAACCCGAGGTTGCTGA...GCTGGAACAGTTGCCGGATTCGGGGTGCCCTGCGCCTCGGGCGGAAGCAGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp AGCCGAGGGTGCGTCCCAGCACAAGCTGGTCCCGCGGCAGCTCCCACGTGGAGTTCTAGCCCAGTGAGGTaGGTCAGTGTGAGCACGCTG +
Preference number: 5 (lower is better)
Translates to: SRGCVPAQAGPAAAPTWSSSPVR*VSVSTL
Trigger: CAGCGTGCTCACACTGACCAACCTCACTGGGCTAGA...ACTCCACGTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACGCACCCTCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp ATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATCTGGGCGGGCGGCGCTaGTCGGAGTGGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: IDLVGGMGRLGHAVTPFDLGGRR*SEWCCR
Trigger: CCTGCAGCACCACTCCGACAAGCGCCGCCCGCCCAG...ATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp GGGTGCGTCCCAGCACAAGCTGGTCCCGCGGCAGCTCCCACGTGGAGTCATAGGCTGTGGACGCAGTTCTaGGAGGCCAGAAACTCCATG +
Preference number: 5 (lower is better)
Translates to: GCVPAQAGPAAAPTWSHRLWTQF*EARNSM
Trigger: CATGGAGTTTCTGGCCTCCAAGAACTGCGTCCACAG...CCTATGACTCCACGTGGGAGCTGCCGCGGGACCAGCTTGTGCTGGGACGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACAGCCAGCCCCAGGGTTaGGGGCACAACACGTCAGGA +
Preference number: 5 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNSQPQG*GHNTSG
Trigger: TCCTGACGTGTTGTGCCCCAAACCCTGGGGCTGGCT...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCGGGGGTGTCCTGTACTaGGCTCAGCCTCCAGCATTA +
Preference number: 5 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGGGVLY*AQPPAL
Trigger: TAATGCTGGAGGCTGAGCCAAGTACAGGACACCCCC...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp CTCCCTGGAGGCAGAGGGCTGGTCACGGCCCCTGCAGTTTTCTTGCCTCCTAAGAACAGCAGCTCGCCTTaGAGGGCCAGAGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: LPGGRGLVTAPAVFLPPKNSSSP*RARAGI
Trigger: GATGCCAGCTCTGGCCCTCAAAGGCGAGCTGCTGTT...CTTAGGAGGCAAGAAAACTGCAGGGGCCGTGACCAGCCCTCTGCCTCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCACTGGCTCAGAGTCAGTaGGCCTCCCTGGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SILSSTQTSAQVLEWWAALAQSQ*ASLEAE
Trigger: CTCTGCCTCCAGGGAGGCCAACTGACTCTGAGCCAG...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACCAGGGACACAGGCACTaGCTATGGCTGCGTGTGCTC +
Preference number: 5 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNQGHRH*LWLRVL
Trigger: GAGCACACGCAGCCATAGCAAGTGCCTGTGTCCCTG...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCGCGTTCACAGAGACGTaGATGGATGACACCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGAFTET*MDDTWS
Trigger: ACTCCAGGTGTCATCCATCAACGTCTCTGTGAACGC...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACTCGCCCAGGGTGCGGTaGTCTTTGAACCACAGGACA +
Preference number: 5 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNSPRVR*SLNHRT
Trigger: TGTCCTGTGGTTCAAAGACAACCGCACCCTGGGCGA...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp CGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCCCAGTACGTCACGTTACGGGTCTCCGACACGTaGCGCGTGGACAGGGCGATT +
Preference number: 5 (lower is better)
Translates to: RSVLTTSNSCSSSQYVTLRVSDT*RVDRAI
Trigger: AATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCG...TAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp TTAGGCTGCCTAATGGCCCCAGACCAGCTCGGGCCAGGGAACGCAGGGACTGGCACTCGGACAGGGACATaGATCTGTAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LGCLMAPDQLGPGNAGTGTRTGT*ICSWKE
Trigger: CTCCTTCCAGCTACAGATCAATGTCCCTGTCCGAGT...GCCAGTCCCTGCGTTCCCTGGCCCGAGCTGGTCTGGGGCCATTAGGCAGCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GCGTGTCCTGGCCCACAGCGTTGCGCAGCGTGCAGCGCACCGACAGTGGCCGATGTGGATTTAAGCATCTaGACGGCCACTTTCATCGTG +
Preference number: 5 (lower is better)
Translates to: ACPGPQRCAACSAPTVADVDLSI*TATFIV
Trigger: CACGATGAAAGTGGCCGTCAAGATGCTTAAATCCAC...ATCGGCCACTGTCGGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGACACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp TCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGCTGCACTCCGACATAAGGGCTaGCTTCTCACTGCTGCGGGC +
Preference number: 5 (lower is better)
Translates to: SILSSTQTSAQVLEWWAALRHKG*LLTAAG
Trigger: GCCCGCAGCAGTGAGAAGCAAGCCCTTATGTCGGAG...TGCAGCCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCAAAGTCACAGATCTaGACCAGCTTGCCTTCACAG +
Preference number: 5 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRPKSQI*TSLPSQ
Trigger: CTGTGAAGGCAAGCTGGTCAAGATCTGTGACTTTGG...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGAGGGTGCGGTTGTCTTaGAACCACAGGACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGRVRLS*NHRTVG
Trigger: GCCCACTGTCCTGTGGTTCAAAGACAACCGCACCCT...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTTCCTGGCCCACAGCGTaGCGCAGCGTGCAGCGCACC +
Preference number: 5 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGSWPTA*RSVQRT
Trigger: GGTGCGCTGCACGCTGCGCAACGCTGTGGGCCAGGA...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTCCTCTCACATCCTTCTaGGGGTACCCATCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSPLTSF*GYPSEA
Trigger: AGCTTCAGATGGGTACCCCAAGAAGGATGTGAGAGG...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS GCA 90 bp AACGCTCTTTCCCAAACCAGACCCAGACTCGGGAGCAGTGCCTGCTaGAGTGTGATGGCCCCTCTAGTGCCTGCAAATCAGCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: NALSQTRPRLGSSAC*SVMAPLVPANQHQA
Trigger: GGCCTGATGCTGATTTGCAGGCACTAGAGGGGCCATCACACTGCAGCAGGCACTGCTCCCGAGTCTGGGTCTGGTTTGGGAAAGAGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520229.1
CDS GCA 90 bp GGAGAGGAACGCTCTTTCCCAAACCAGACCCAGACTCGGGAGCAGTaGCTGCTGCAGTGTGATGGCCCCTCTAGTGCCTGCAAATCAGCA +
Preference number: 5 (lower is better)
Translates to: GEERSFPNQTQTREQ*LLQCDGPSSACKSA
Trigger: TGCTGATTTGCAGGCACTAGAGGGGCCATCACACTGCAGCAGGCACTGCTCCCGAGTCTGGGTCTGGTTTGGGAAAGAGCGTTCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520229.1
CDS-3UTR CAA 90 bp ATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATAGCCGCATGGTGTCCTaGCTGCTGATGGCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: IDLVGGMGRLGHAVTPFDSRMVS*LLMASG
Trigger: ACCAGAAGCCATCAGCAGCAAGGACACCATGCGGCT...ATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp TCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCCCACCTCTTATGTCCACTCGAAGTaGACCACCTCATTCCCGATC +
Preference number: 5 (lower is better)
Translates to: SGMGQLVGEGQTSKAPTSYVHSK*TTSFPI
Trigger: GATCGGGAATGAGGTGGTCAACTTCGAGTGGACATA...AGAGGTGGGCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp CGCAGTGTGCTCACCACCTCAAACTCCTGCTCCTCCTCCCAGTACGTCACGTTAAGCCGCCCACTTTCTTaGCGGGGGTATGTCCACTCG +
Preference number: 5 (lower is better)
Translates to: RSVLTTSNSCSSSQYVTLSRPLS*RGYVHS
Trigger: CGAGTGGACATACCCCCGCAAAGAAAGTGGGCGGCT...TAACGTGACGTACTGGGAGGAGGAGCAGGAGTTTGAGGTGGTGAGCACACTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp GTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGTGTCCAGAGGGTGCGGTTGTCTTaGAACCACAGGACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: VVTLIGLHGSIEDGAGVQRVRLS*NHRTVG
Trigger: GCCCACTGTCCTGTGGTTCAAAGACAACCGCACCCT...CTGGACACCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCACGGGTCTCCGACACGTaGCGCGTGGACAGGGCGATT +
Preference number: 5 (lower is better)
Translates to: FLQSLIAGPMQSQGHILARVSDT*RVDRAI
Trigger: AATCGCCCTGTCCACGCGCAACGTGTCGGAGACCCG...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGCTGTGGACGCAGTTCTaGGAGGCCAGAAACTCCATG +
Preference number: 5 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVLWTQF*EARNSM
Trigger: CATGGAGTTTCTGGCCTCCAAGAACTGCGTCCACAG...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS TCA 90 bp ACATTGAGGACAAGCTCTGGCCCCGGGGGTGTGACGACCAGGCCCTaGGAGATCTGTGGTTCCAGAAGTAACAGGAGAGACAGCAACAGC +
Preference number: 5 (lower is better)
Translates to: TLRTSSGPGGVTTRP*EICGSRSNRRDSNS
Trigger: GCTGTTGCTGTCTCTCCTGTTACTTCTGGAACCACAGATCTCTCAGGGCCTGGTCGTCACACCCCCGGGGCCAGAGCTTGTCCTCAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS GCA 90 bp AGGAACGCTCTTTCCCAAACCAGACCCAGACTCGGGAGCAGTGCCTaGTGCAGTGTGATGGCCCCTCTAGTGCCTGCAAATCAGCATCAG +
Preference number: 5 (lower is better)
Translates to: RNALSQTRPRLGSSA*CSVMAPLVPANQHQ
Trigger: CTGATGCTGATTTGCAGGCACTAGAGGGGCCATCACACTGCAGCAGGCACTGCTCCCGAGTCTGGGTCTGGTTTGGGAAAGAGCGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520229.1
CDS CCA 90 bp TGCTTGCAATGGAGGAATGCTGCCTGGAGTAGCCACACGATGTCCTaGAAGGGCACCTGTGAGAAGGCTGGAGGCCTGGGTTCTAGTCTC +
Preference number: 5 (lower is better)
Translates to: CLQWRNAAWSSHTMS*KGTCEKAGGLGSSL
Trigger: GAGACTAGAACCCAGGCCTCCAGCCTTCTCACAGGTGCCCTTCCAGGACATCGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CCA 90 bp TGGGAGGTCACAGAGGGAAGCAGAGATACTCCTCCCTGCTTGCAATaGAGGAATGCTGCCTGGAGTAGCCACACGATGTCCTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: WEVTEGSRDTPPCLQ*RNAAWSSHTMSWKG
Trigger: GCCCTTCCAGGACATCGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATCTCTGCTTCCCTCTGTGACCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS-3UTR CAA 90 bp ATAGATCTCGTCGGAGGCATGGGCAGGCTGGGCCATGCGGTAACCCCGTTTGATGCTCTCTCCTCCTCCTaGTTGATCTCCTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: IDLVGGMGRLGHAVTPFDALSSS*LISSLA
Trigger: AGCCAGAGAGGAGATCAACAAGGAGGAGGAGAGAGC...ATCAAACGGGGTTACCGCATGGCCCAGCCTGCCCATGCCTCCGACGAGATCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp GCTGCAGGAAGGTGTGTTTGTTGCGGTGCAGGTAGTCCACCAGGTCTCCGTAGCTCACGTGGACACCTTTaGAGGTCTCTGCAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: AAGRCVCCGAGSPPGLRSSRGHL*RSLQAD
Trigger: GTCTGCCTGCAGAGACCTCAAAAGGTGTCCACGTGA...GCTACGGAGACCTGGTGGACTACCTGCACCGCAACAAACACACCTTCCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp TATAGTCGTTGTCACCCTCATTGGGCTGCACGGCAGTATAGAGGACGGAGCTGGCTCCGACATAAGGGCTaGCTTCTCACTGCTGCGGGC +
Preference number: 5 (lower is better)
Translates to: YSRCHPHWAARQYRGRSWLRHKG*LLTAAG
Trigger: GCCCGCAGCAGTGAGAAGCAAGCCCTTATGTCGGAG...CCAGCTCCGTCCTCTATACTGCCGTGCAGCCCAATGAGGGTGACAACGACTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGCAGATCTTGACCAGCTaGCCTTCACAGATGAGCACG +
Preference number: 5 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVQILTS*PSQMST
Trigger: CGTGCTCATCTGTGAAGGCAAGCTGGTCAAGATCTG...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GCGCTGCCTCAGGGATGGGGCAGCTGGTGGGTGAGGGGCAAACCTCCAAAGCGCTTAGGGTATATGGCCTaGCTTCATCTGGACAAATGT +
Preference number: 5 (lower is better)
Translates to: ALPQGWGSWWVRGKPPKRLGYMA*LHLDKC
Trigger: ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAA...GCGCTTTGGAGGTTTGCCCCTCACCCACCAGCTGCCCCATCCCTGAGGCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GCAATGCAGGGTTGGTGCCCAGAGGGGTTGAGCTTCCTGCACCCCCTTCCCAACATCTTTGGTACCGTATaGAGAACCCACTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: AMQGWCPEGLSFLHPLPNIFGTV*RTHSPS
Trigger: GGAGGGAGAGTGGGTTCTCAATACGGTACCAAAGAT...GTTGGGAAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCAACCCTGCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS TCA 90 bp GGGAGGGGAAGTTGGGCTGGATGGTATCCAGTAGCCTACCAGCTCTaGCAGCCTGTCCTCCGGGTGACAGTTCCAATACCAGGCTCTTAT +
Preference number: 5 (lower is better)
Translates to: GRGSWAGWYPVAYQL*QPVLRVTVPIPGSY
Trigger: ATAAGAGCCTGGTATTGGAACTGTCACCCGGAGGACAGGCTGTCAGAGCTGGTAGGCTACTGGATACCATCCAGCCCAACTTCCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517660.1
CDS CCA 90 bp GGAAGCAGAGATACTCCTCCCTGCTTGCAATGGAGGAATGCTGCCTaGAGTAGCCACACGATGTCCTGGAAGGGCACCTGTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: GSRDTPPCLQWRNAA*SSHTMSWKGTCEKA
Trigger: AGCCTTCTCACAGGTGCCCTTCCAGGACATCGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATCTCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS-3UTR CAA 90 bp CGGCAGCTCACGTGGACACCTTTTGAGGTCTCTGCAGGCAGACCAGATGATGTTTCGCCCAGGGTGCGGTaGTCTTTGAACCACAGGACA +
Preference number: 5 (lower is better)
Translates to: RQLTWTPFEVSAGRPDDVSPRVR*SLNHRT
Trigger: TGTCCTGTGGTTCAAAGACAACCGCACCCTGGGCGA...AACATCATCTGGTCTGCCTGCAGAGACCTCAAAAGGTGTCCACGTGAGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp TGGCCGATCCACGTGCTGCAGACGCAGTGTGCTCACCACCTCAAACTCCTGCTCCCAAAGTCACAGATCTaGACCAGCTTGCCTTCACAG +
Preference number: 5 (lower is better)
Translates to: WPIHVLQTQCAHHLKLLLPKSQI*TSLPSQ
Trigger: CTGTGAAGGCAAGCTGGTCAAGATCTGTGACTTTGG...GAGCAGGAGTTTGAGGTGGTGAGCACACTGCGTCTGCAGCACGTGGATCGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTTCAGCAACCTCGGGTTaGGGGTCAGGCAGGGGGATG +
Preference number: 5 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGSATSG*GSGRGM
Trigger: CATCCCCCTGCCTGACCCCAAACCCGAGGTTGCTGA...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGATGGTTGAGGAGGTGTaGACTTCATTCAGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVMVEEV*TSFRVE
Trigger: CTCCACCCTGAATGAAGTCAACACCTCCTCAACCAT...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GGGATTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTCCCTCTTTGTCCCTTTaGCCCAGGATACCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: GIPPKPHSRSNAEPGPYTPSLSL*PRIPPE
Trigger: CTCCGGGGGTATCCTGGGCAAAAGGGACAAAGAGGG...AGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS GCA 90 bp GCAATTGGGAGGTCACAGAGGGAAGCAGAGATACTCCTCCCTGCTTaGAATGGAGGAATGCTGCCTGGAGTAGCCACACGATGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: AIGRSQREAEILLPA*NGGMLPGVATRCPG
Trigger: TCCAGGACATCGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATCTCTGCTTCCCTCTGTGACCTCCCAATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS GCA 90 bp CTGTGCAATTGGGAGGTCACAGAGGGAAGCAGAGATACTCCTCCCTaGTTGCAATGGAGGAATGCTGCCTGGAGTAGCCACACGATGTCC +
Preference number: 5 (lower is better)
Translates to: LCNWEVTEGSRDTPP*LQWRNAAWSSHTMS
Trigger: GGACATCGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATCTCTGCTTCCCTCTGTGACCTCCCAATTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS-3UTR CAA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGAGTCCACGGGAGTCATaGTGGGTGCAAAAGTATTCT +
Preference number: 5 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGSPRES*WVQKYS
Trigger: AGAATACTTTTGCACCCACAATGACTCCCGTGGACT...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp CATATCCAAGAGGAAGTCAGTCACCGGCTCCACCAGCCGCCCACTTTCTTTGCGACCAGAAAAGCCACGTaGGTGATCATAGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: HIQEEVSHRLHQPPTFFATRKAT*VIIGDR
Trigger: CCTGTCCCCTATGATCACCAACGTGGCTTTTCTGGT...CGCAAAGAAAGTGGGCGGCTGGTGGAGCCGGTGACTGACTTCCTCTTGGATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp CTGCTAGGTCTGGGCAGTGACAAAACCATACCCCCATGGAGCGCTGCCTCAGGGGTGGATTTAAGCATCTaGACGGCCACTTTCATCGTG +
Preference number: 5 (lower is better)
Translates to: LLGLGSDKTIPPWSAASGVDLSI*TATFIV
Trigger: CACGATGAAAGTGGCCGTCAAGATGCTTAAATCCAC...CCCTGAGGCAGCGCTCCATGGGGGTATGGTTTTGTCACTGCCCAGACCTAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp CCAGGACTGATGGGCCTGAAGGACAGGGACACAGGCACTTGCTATGGCTGCGTGTCTCATTTGCCCTCTTaGTCCCTTTTGCCCAGGATA +
Preference number: 5 (lower is better)
Translates to: PGLMGLKDRDTGTCYGCVSHLPS*SLLPRI
Trigger: TATCCTGGGCAAAAGGGACAAAGAGGGCAAATGAGA...CACGCAGCCATAGCAAGTGCCTGTGTCCCTGTCCTTCAGGCCCATCAGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS TCA 90 bp TCTCACCCTGGCGGACCACAGTCTGCACTGCGTTCACAGAGACGTTaGTGGATGACACTGGTAGAGAGAGATTGGCTTAGGTCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: SHPGGPQSALRSQRR*WMTLVERDWLRSGE
Trigger: TTCCCCAGACCTAAGCCAATCTCTCTCTACCAGTGTCATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCAGGGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522466.1
CDS TCA 90 bp GCTGTGGATTCAGGGTCTCCTGCTTGGAGACAGGGGAGGACTGCATaGCTTCAGAACTTGTCACTAGAGGCCTCTGTGCAATTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: AVDSGSPAWRQGRTA*LQNLSLEASVQLGG
Trigger: ACCTCCCAATTGCACAGAGGCCTCTAGTGACAAGTTCTGAAGTCATGCAGTCCTCCCCTGTCTCCAAGCAGGAGACCCTGAATCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS GCA 90 bp ACAATGCACATGAGGGTGATGTTCTCACCCTGGCGGACCACAGTCTaGACTGCGTTCACAGAGACGTTGATGGATGACACCTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: TMHMRVMFSPWRTTV*TAFTETLMDDTWSL
Trigger: CAGACTCCAGGTGTCATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCAGGGTGAGAACATCACCCTCATGTGCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS GCA 90 bp ACAATGCACATGAGGGTGATGTTCTCACCCTGGCGGACCACAGTCTaGACTGCGTTCACAGAGACGTTGATGGATGACACTCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TMHMRVMFSPWRTTV*TAFTETLMDDTLLS
Trigger: GCTCAGCAGAGTGTCATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCAGGGTGAGAACATCACCCTCATGTGCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS GCA 90 bp GAAGGCTGTGGATTCAGGGTCTCCTGCTTGGAGACAGGGGAGGACTaGATGACTTCAGAACTTGTCACTAGAGGCCTCTGTGCAATTGGG +
Preference number: 5 (lower is better)
Translates to: EGCGFRVSCLETGED*MTSELVTRGLCAIG
Trigger: CCCAATTGCACAGAGGCCTCTAGTGACAAGTTCTGAAGTCATGCAGTCCTCCCCTGTCTCCAAGCAGGAGACCCTGAATCCACAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS-3UTR CAA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTTCTAGCCCAGTGAGGTaGGTCAGTGTGAGCACGCTG +
Preference number: 5 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGSSPVR*VSVSTL
Trigger: CAGCGTGCTCACACTGACCAACCTCACTGGGCTAGA...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp CACTGTCCATTCTGTCTTCGACGCAGACCTCGGCACAGGTGCTGGAGTGGTGGGTCGATGTCTGCATATTaGACGTCTCCTTTCATGTCC +
Preference number: 5 (lower is better)
Translates to: HCPFCLRRRPRHRCWSGGSMSAY*TSPFMS
Trigger: GGACATGAAAGGAGACGTCAAATATGCAGACATCGA...CCCACCACTCCAGCACCTGTGCCGAGGTCTGCGTCGAAGACAGAATGGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTTGGTGCCCAGAGGGGTaGAGCTTCCTGCACCCCCTT +
Preference number: 5 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCWCPEG*SFLHPL
Trigger: AAGGGGGTGCAGGAAGCTCAACCCCTCTGGGCACCA...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS GCA 90 bp ACAATGCACATGAGGGTGATGTTCTCACCCTGGCGGACCACAGTCTaGACTGCGTTCACAGAGACGTTGATGGATGACACTGGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: TMHMRVMFSPWRTTV*TAFTETLMDDTGRE
Trigger: CTCTCTACCAGTGTCATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCAGGGTGAGAACATCACCCTCATGTGCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522466.1
CDS GCA 90 bp GTTCAGGGACTGTATGTCCCTGAAGGCTGTGGATTCAGGGTCTCCTaGTTGGAGACAGGGGAGGACTGCATGACTTCAGAACTTGTCACT +
Preference number: 5 (lower is better)
Translates to: VQGLYVPEGCGFRVS*LETGEDCMTSELVT
Trigger: AGTGACAAGTTCTGAAGTCATGCAGTCCTCCCCTGTCTCCAAGCAGGAGACCCTGAATCCACAGCCTTCAGGGACATACAGTCCCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CCA 90 bp ACCTCATTCCCGATCACAATGCACATGAGGGTGATGTTCTCACCCTaGCGGACCACAGTCTGCACTGCGTTCACAGAGACGTTGATGGAT +
Preference number: 5 (lower is better)
Translates to: TSFPITMHMRVMFSP*RTTVCTAFTETLMD
Trigger: ATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCAGGGTGAGAACATCACCCTCATGTGCATTGTGATCGGGAATGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261799.9
ENST00000520579.5
ENST00000522466.1
CDS-3UTR CAA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAAGCCGCATGGTGTCCTaGCTGCTGATGGCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLSRMVS*LLMASG
Trigger: ACCAGAAGCCATCAGCAGCAAGGACACCATGCGGCT...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp TTCCTCCAAAGCCTCATAGCAGGTCCAATGCAGAGCCAGGGCCATATACTGGCAACCAGAAAAGCCACGTaGGTGATCATAGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: FLQSLIAGPMQSQGHILATRKAT*VIIGDR
Trigger: CCTGTCCCCTATGATCACCAACGTGGCTTTTCTGGT...TGCCAGTATATGGCCCTGGCTCTGCATTGGACCTGCTATGAGGCTTTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTAGCCGCCCACTTTCTTaGCGGGGGTATGTCCACTCG +
Preference number: 5 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCSRPLS*RGYVHS
Trigger: CGAGTGGACATACCCCCGCAAAGAAAGTGGGCGGCT...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp AGCTCCGACATAAGGGCTTGCTTCTCACTGCTGCGGGCTGTGGATTTAAGCATCACTCGGACAGGGACATaGATCTGTAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SSDIRACFSLLRAVDLSITRTGT*ICSWKE
Trigger: CTCCTTCCAGCTACAGATCAATGTCCCTGTCCGAGT...GATGCTTAAATCCACAGCCCGCAGCAGTGAGAAGCAAGCCCTTATGTCGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp ACATTTACATTCTCATCACAGATGCGGGGCCCGTCTGGCCTTCTAGACTCTGGTTCACGTGGACACCTTTaGAGGTCTCTGCAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: TFTFSSQMRGPSGLLDSGSRGHL*RSLQAD
Trigger: GTCTGCCTGCAGAGACCTCAAAAGGTGTCCACGTGA...ACCAGAGTCTAGAAGGCCAGACGGGCCCCGCATCTGTGATGAGAATGTAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTACCTGCAATGCAGGGTaGGTGCCCAGAGGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCTCNAG*VPRGVE
Trigger: CTCAACCCCTCTGGGCACCAACCCTGCATTGCAGGT...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS CCA 90 bp CAGTGCAACGTCCCCTTTCTTCTCGTGCAGTGTCACCACCAGCTGTaGGTCTGTTACTCGGCATGGAATGGTGATCTCAGTTATTTCCGT +
Preference number: 5 (lower is better)
Translates to: QCNVPFLLVQCHHQL*VCYSAWNGDLSYFR
Trigger: ACGGAAATAACTGAGATCACCATTCCATGCCGAGTAACAGACCCACAGCTGGTGGTGACACTGCACGAGAAGAAAGGGGACGTTGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS-3UTR CAA 90 bp ACTCATGGCCGTCAGAGCTCACAGACTCAATCACCTTCCATCGGATCTCGTAACCAGATCTTGACCAGCTaGCCTTCACAGATGAGCACG +
Preference number: 5 (lower is better)
Translates to: THGRQSSQTQSPSIGSRNQILTS*PSQMST
Trigger: CGTGCTCATCTGTGAAGGCAAGCTGGTCAAGATCTG...GTTACGAGATCCGATGGAAGGTGATTGAGTCTGTGAGCTCTGACGGCCATGAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp GACCCCCAGGATGGAAGTTTAGGGTATATGGCCTTGCTTCATCTGGACAAATGTTGTGCAGCTGTGTTCTaGAGACTTGCTGGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: DPQDGSLGYMALLHLDKCCAAVF*RLAGGL
Trigger: CAGGCCCCCAGCAAGTCTCAAGAACACAGCTGCACA...ACATTTGTCCAGATGAAGCAAGGCCATATACCCTAAACTTCCATCCTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp GATGGTCATTCACACTCTCCGTCACATTGCAGGTGTAGGTCCCCGAGTCTTCTAGCGTTCACAGAGACGTaGATGGATGACACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: DGHSHSPSHCRCRSPSLLAFTET*MDDTLL
Trigger: CAGCAGAGTGTCATCCATCAACGTCTCTGTGAACGC...TAGAAGACTCGGGGACCTACACCTGCAATGTGACGGAGAGTGTGAATGACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp GCATGGGGTCCACGTAGATGTACTCATGGCCGTCAGAGCTCACAGACTCAATCAAGTCCACGGGAGTCATaGTGGGTGCAAAAGTATTCT +
Preference number: 5 (lower is better)
Translates to: AWGPRRCTHGRQSSQTQSSPRES*WVQKYS
Trigger: AGAATACTTTTGCACCCACAATGACTCCCGTGGACT...TGATTGAGTCTGTGAGCTCTGACGGCCATGAGTACATCTACGTGGACCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp ACTCATGGCCGTCAGAGCTCACAGACTCAATCACCTTCCATCGGATCTCGTAACTATGTCCACTCGAAGTaGACCACCTCATTCCCGATC +
Preference number: 5 (lower is better)
Translates to: THGRQSSQTQSPSIGSRNYVHSK*TTSFPI
Trigger: GATCGGGAATGAGGTGGTCAACTTCGAGTGGACATA...GTTACGAGATCCGATGGAAGGTGATTGAGTCTGTGAGCTCTGACGGCCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp ACTCATGGCCGTCAGAGCTCACAGACTCAATCACCTTCCATCGGATCTCGTAACATGGTTGAGGAGGTGTaGACTTCATTCAGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: THGRQSSQTQSPSIGSRNMVEEV*TSFRVE
Trigger: CTCCACCCTGAATGAAGTCAACACCTCCTCAACCAT...GTTACGAGATCCGATGGAAGGTGATTGAGTCTGTGAGCTCTGACGGCCATGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS-3UTR CAA 90 bp ATCATAGGGAGGAGACTGGCTTTCTTCTGGATGAGGCAACACTGCTCAAGGCTAGAGAGCTATGATTCCTaGAGGGGTAGCTGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: IIGRRLAFFWMRQHCSRLESYDS*RGSWLN
Trigger: GTTCAGCCAGCTACCCCTCAAGGAATCATAGCTCTC...TAGCCTTGAGCAGTGTTGCCTCATCCAGAAGAAAGCCAGTCTCCTCCCTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp TGTCTTTTACAAGACATAACTGTCCTCACTGTCCATTCTGTCTTCGACGCAGACGCTCTCTCCTCCTCCTaGTTGATCTCCTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: CLLQDITVLTVHSVFDADALSSS*LISSLA
Trigger: AGCCAGAGAGGAGATCAACAAGGAGGAGGAGAGAGC...GTCTGCGTCGAAGACAGAATGGACAGTGAGGACAGTTATGTCTTGTAAAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS-3UTR CAA 90 bp ACTCATGGCCGTCAGAGCTCACAGACTCAATCACCTTCCATCGGATCTCGTAACTCGATGTCTGCATATTaGACGTCTCCTTTCATGTCC +
Preference number: 5 (lower is better)
Translates to: THGRQSSQTQSPSIGSRNSMSAY*TSPFMS
Trigger: GGACATGAAAGGAGACGTCAAATATGCAGACATCGA...GTTACGAGATCCGATGGAAGGTGATTGAGTCTGTGAGCTCTGACGGCCATGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS TCA 72 bp GGGCTCCTGGGACATCCGTTCCCACACCACCGGAGCTaGACCCGAGCAGGTCAGAACGAAGGTGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: GLLGHPFPHHRS*TRAGQNEGAGD
Trigger: GTCTCCAGCACCTTCGTTCTGACCTGCTCGGGTTCAGCTCCGGTGGTGTGGGAACGGATGTCCCAGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS GCA 72 bp CGCTCTTTCCCAAACCAGACCCAGACTCGGGAGCAGTaGCTGCTGCAGTGTGATGGCCCCTCTAGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: RSFPNQTQTREQ*LLQCDGPSSAC
Trigger: GCAGGCACTAGAGGGGCCATCACACTGCAGCAGGCACTGCTCCCGAGTCTGGGTCTGGTTTGGGAAAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520229.1
CDS CCA 72 bp CTCCTCTCTGGCTCCAAGTTGCTCACAGAGCGATCCTaGGTCCCAGATAGGGCGGGCAGTCACTGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LLSGSKLLTERS*VPDRAGSHCWL
Trigger: CAGCCAGCAGTGACTGCCCGCCCTATCTGGGACCCAGGATCGCTCTGTGAGCAACTTGGAGCCAGAGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517660.1
ENST00000520579.5
ENST00000523456.1
CDS CCA 72 bp TTGGTCAGTGTGAGCACGCTGGAGAAGGTGCCATCCTaGGCCTTGGCCATTTCCTGTGGGGGCTCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LVSVSTLEKVPS*ALAISCGGSWD
Trigger: GTCCCAGGAGCCCCCACAGGAAATGGCCAAGGCCCAGGATGGCACCTTCTCCAGCGTGCTCACACTGACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS CAA 72 bp GAACCCGAGCAGGTCAGAACGAAGGTGCTGGAGACATaGAGGACAAGCTCTGGCCCCGGGGGTGTGACGACC +
Preference number: 6 (lower is better)
Translates to: EPEQVRTKVLET*RTSSGPGGVTT
Trigger: GGTCGTCACACCCCCGGGGCCAGAGCTTGTCCTCAATGTCTCCAGCACCTTCGTTCTGACCTGCTCGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS CCA 72 bp CGGAAGCCGCATGGTGTCCTTGCTGCTGATGGCTTCTaGTGTGGGCACAGTTCCAGGCTCTGGACAGTCACC +
Preference number: 6 (lower is better)
Translates to: RKPHGVLAADGF*CGHSSRLWTVT
Trigger: GGTGACTGTCCAGAGCCTGGAACTGTGCCCACACCAGAAGCCATCAGCAGCAAGGACACCATGCGGCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261799.9
ENST00000520579.5
CDS CCA 72 bp CCTATCCAGGGCTGGGCACTTGCTGCTGATGGCTTCTaGTGTGGGCACAGTTCCAGGCTCTGGACAGTCACC +
Preference number: 6 (lower is better)
Translates to: PIQGWALAADGF*CGHSSRLWTVT
Trigger: GGTGACTGTCCAGAGCCTGGAACTGTGCCCACACCAGAAGCCATCAGCAGCAAGTGCCCAGCCCTGGATAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS TCA 72 bp ACAAGCTCTGGCCCCGGGGGTGTGACGACCAGGCCCTaGGAGATCTGTGGTTCCAGAAGTAACAGGAGAGAC +
Preference number: 6 (lower is better)
Translates to: TSSGPGGVTTRP*EICGSRSNRRD
Trigger: GTCTCTCCTGTTACTTCTGGAACCACAGATCTCTCAGGGCCTGGTCGTCACACCCCCGGGGCCAGAGCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS GCA 72 bp TGGGAGGTCACAGAGGGAAGCAGAGATACTCCTCCCTaGTTGCAATGGAGGAATGCTGCCTGGAGTAGCCAC +
Preference number: 6 (lower is better)
Translates to: WEVTEGSRDTPP*LQWRNAAWSSH
Trigger: GTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATCTCTGCTTCCCTCTGTGACCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CCA 72 bp CTCGGCATCATTAGGGAGGAAGCCCACGGTGGGATCTaGCACAAAGATGTAGAGCCGTTTCCGCTCATCGGT +
Preference number: 6 (lower is better)
Translates to: LGIIREEAHGGI*HKDVEPFPLIG
Trigger: ACCGATGAGCGGAAACGGCTCTACATCTTTGTGCCAGATCCCACCGTGGGCTTCCTCCCTAATGATGCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS CCA 72 bp CCGATCACAATGCACATGAGGGTGATGTTCTCACCCTaGCGGACCACAGTCTGCACTGCGTTCACAGAGACG +
Preference number: 6 (lower is better)
Translates to: PITMHMRVMFSP*RTTVCTAFTET
Trigger: CGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCAGGGTGAGAACATCACCCTCATGTGCATTGTGATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261799.9
ENST00000520579.5
ENST00000522466.1
CDS CCA 72 bp TTCCCTGTCTGTACAGTGAGGGAGGGGAAGTTGGGCTaGATGGTATCCAGTAGCCTACCAGCTCTGACAGCC +
Preference number: 6 (lower is better)
Translates to: FPVCTVREGKLG*MVSSSLPALTA
Trigger: GGCTGTCAGAGCTGGTAGGCTACTGGATACCATCCAGCCCAACTTCCCCTCCCTCACTGTACAGACAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517660.1
CDS CCA 72 bp TGTCCTGGAAGGGCACCTGTGAGAAGGCTGGAGGCCTaGGTTCTAGTCTCACACTTGGGAGCAGAAGGTCTT +
Preference number: 6 (lower is better)
Translates to: CPGRAPVRRLEA*VLVSHLGAEGL
Trigger: AAGACCTTCTGCTCCCAAGTGTGAGACTAGAACCCAGGCCTCCAGCCTTCTCACAGGTGCCCTTCCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CCA 72 bp GATACTCCTCCCTGCTTGCAATGGAGGAATGCTGCCTaGAGTAGCCACACGATGTCCTGGAAGGGCACCTGT +
Preference number: 6 (lower is better)
Translates to: DTPPCLQWRNAA*SSHTMSWKGTC
Trigger: ACAGGTGCCCTTCCAGGACATCGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CAA 72 bp GAGGTCACAGAGGGAAGCAGAGATACTCCTCCCTGCTaGCAATGGAGGAATGCTGCCTGGAGTAGCCACACG +
Preference number: 6 (lower is better)
Translates to: EVTEGSRDTPPC*QWRNAAWSSHT
Trigger: CGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATCTCTGCTTCCCTCTGTGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CAA 90 bp TGCAATTGGGAGGTCACAGAGGGAAGCAGAGATACTCCTCCCTGCTaGCAATGGAGGAATGCTGCCTGGAGTAGCCACACGATGTCCTGG +
Preference number: 6 (lower is better)
Translates to: CNWEVTEGSRDTPPC*QWRNAAWSSHTMSW
Trigger: CCAGGACATCGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATCTCTGCTTCCCTCTGTGACCTCCCAATTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS TCA 72 bp AGTTGGGCTGGATGGTATCCAGTAGCCTACCAGCTCTaGCAGCCTGTCCTCCGGGTGACAGTTCCAATACCA +
Preference number: 6 (lower is better)
Translates to: SWAGWYPVAYQL*QPVLRVTVPIP
Trigger: TGGTATTGGAACTGTCACCCGGAGGACAGGCTGTCAGAGCTGGTAGGCTACTGGATACCATCCAGCCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517660.1
CDS GCA 72 bp ATGAGGGTGATGTTCTCACCCTGGCGGACCACAGTCTaGACTGCGTTCACAGAGACGTTGATGGATGACACC +
Preference number: 6 (lower is better)
Translates to: MRVMFSPWRTTV*TAFTETLMDDT
Trigger: GGTGTCATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCAGGGTGAGAACATCACCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS GCA 72 bp AGGTCACAGAGGGAAGCAGAGATACTCCTCCCTGCTTaGAATGGAGGAATGCTGCCTGGAGTAGCCACACGA +
Preference number: 6 (lower is better)
Translates to: RSQREAEILLPA*NGGMLPGVATR
Trigger: TCGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATCTCTGCTTCCCTCTGTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CCA 72 bp TTCCGCTCATCGGTCTCCAGTCCACGGGAGTCATTGTaGGTGCAAAAGTATTCTCCCGTGTCTAGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: FRSSVSSPRESL*VQKYSPVSSPV
Trigger: CACTGGGCTAGACACGGGAGAATACTTTTGCACCCACAATGACTCCCGTGGACTGGAGACCGATGAGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS CCA 72 bp ACAGAGGGAAGCAGAGATACTCCTCCCTGCTTGCAATaGAGGAATGCTGCCTGGAGTAGCCACACGATGTCC +
Preference number: 6 (lower is better)
Translates to: TEGSRDTPPCLQ*RNAAWSSHTMS
Trigger: GGACATCGTGTGGCTACTCCAGGCAGCATTCCTCCATTGCAAGCAGGGAGGAGTATCTCTGCTTCCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CAA 72 bp CGTTTCCGCTCATCGGTCTCCAGTCCACGGGAGTCATaGTGGGTGCAAAAGTATTCTCCCGTGTCTAGCCCA +
Preference number: 6 (lower is better)
Translates to: RFRSSVSSPRES*WVQKYSPVSSP
Trigger: TGGGCTAGACACGGGAGAATACTTTTGCACCCACAATGACTCCCGTGGACTGGAGACCGATGAGCGGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS CAA 72 bp TGGCGGACCACAGTCTGCACTGCGTTCACAGAGACGTaGATGGATGACACTCTGCTGAGCATCAGGCCAGAA +
Preference number: 6 (lower is better)
Translates to: WRTTVCTAFTET*MDDTLLSIRPE
Trigger: TTCTGGCCTGATGCTCAGCAGAGTGTCATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520579.5
CDS TCA 72 bp GGCGGACCACAGTCTGCACTGCGTTCACAGAGACGTTaGTGGATGACACCTGGAGTCTGTAGACATAGTAGG +
Preference number: 6 (lower is better)
Translates to: GGPQSALRSQRR*WMTPGVCRHSR
Trigger: CCTACTATGTCTACAGACTCCAGGTGTCATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261799.9
CDS TCA 72 bp GGCGGACCACAGTCTGCACTGCGTTCACAGAGACGTTaGTGGATGACACTGGTAGAGAGAGATTGGCTTAGG +
Preference number: 6 (lower is better)
Translates to: GGPQSALRSQRR*WMTLVERDWLR
Trigger: CCTAAGCCAATCTCTCTCTACCAGTGTCATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522466.1
CDS TCA 72 bp TCAGGGTCTCCTGCTTGGAGACAGGGGAGGACTGCATaGCTTCAGAACTTGTCACTAGAGGCCTCTGTGCAA +
Preference number: 6 (lower is better)
Translates to: SGSPAWRQGRTA*LQNLSLEASVQ
Trigger: TTGCACAGAGGCCTCTAGTGACAAGTTCTGAAGTCATGCAGTCCTCCCCTGTCTCCAAGCAGGAGACCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS GCA 72 bp ATGAGGGTGATGTTCTCACCCTGGCGGACCACAGTCTaGACTGCGTTCACAGAGACGTTGATGGATGACACT +
Preference number: 6 (lower is better)
Translates to: MRVMFSPWRTTV*TAFTETLMDDT
Trigger: AGTGTCATCCATCAACGTCTCTGTGAACGCAGTGCAGACTGTGGTCCGCCAGGGTGAGAACATCACCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520579.5
ENST00000522466.1
CDS GCA 72 bp GGATTCAGGGTCTCCTGCTTGGAGACAGGGGAGGACTaGATGACTTCAGAACTTGTCACTAGAGGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: GFRVSCLETGED*MTSELVTRGLC
Trigger: ACAGAGGCCTCTAGTGACAAGTTCTGAAGTCATGCAGTCCTCCCCTGTCTCCAAGCAGGAGACCCTGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CCA 72 bp GTCCCCTTTCTTCTCGTGCAGTGTCACCACCAGCTGTaGGTCTGTTACTCGGCATGGAATGGTGATCTCAGT +
Preference number: 6 (lower is better)
Translates to: VPFLLVQCHHQL*VCYSAWNGDLS
Trigger: ACTGAGATCACCATTCCATGCCGAGTAACAGACCCACAGCTGGTGGTGACACTGCACGAGAAGAAAGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5
CDS CAA 72 bp CTTAGTTTCCCTGTCTGTACAGTGAGGGAGGGGAAGTaGGGCTGGATGGTATCCAGTAGCCTACCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: LSFPVCTVREGK*GWMVSSSLPAL
Trigger: CAGAGCTGGTAGGCTACTGGATACCATCCAGCCCAACTTCCCCTCCCTCACTGTACAGACAGGGAAACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517660.1
CDS CAA 72 bp GTAGCTTCTGTCCTCAAAGATACCAGAAAAGCCACGTaGGTGATCATAGGGGACAGGCAGTGCAACGTCCCC +
Preference number: 6 (lower is better)
Translates to: VASVLKDTRKAT*VIIGDRQCNVP
Trigger: GGGGACGTTGCACTGCCTGTCCCCTATGATCACCAACGTGGCTTTTCTGGTATCTTTGAGGACAGAAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000520579.5
CDS GCA 72 bp ATGAGGACTCCAAGGTGTGTGAAGTACCAGGCTCTATaGCTGCATGAGGTAGGTGTTCAGGGACTGTATGTC +
Preference number: 6 (lower is better)
Translates to: MRTPRCVKYQAL*LHEVGVQGLYV
Trigger: GACATACAGTCCCTGAACACCTACCTCATGCAGGCATAGAGCCTGGTACTTCACACACCTTGGAGTCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523456.1
CDS CCA 72 bp CAGTGTCACCACCAGCTGTGGGTCTGTTACTCGGCATaGAATGGTGATCTCAGTTATTTCCGTGAGAAAGAT +
Preference number: 6 (lower is better)
Translates to: QCHHQLWVCYSA*NGDLSYFREKD
Trigger: ATCTTTCTCACGGAAATAACTGAGATCACCATTCCATGCCGAGTAACAGACCCACAGCTGGTGGTGACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261799.9
ENST00000517488.1
ENST00000517957.1
ENST00000520579.5