RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE8A (Homo sapiens)

Ensembl gene IDs: ENSG00000073417

Ensembl transcript IDs: ENST00000310298.8, ENST00000339708.9, ENST00000394553.6, ENST00000478717.5, ENST00000485596.5, ENST00000557819.6, ENST00000557957.5, ENST00000559086.5, ENST00000559742.5, ENST00000560789.5, ENST00000561374.1

Found 819 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCTTGTGTTTTACCAGAAACTGAGGCAAACCGTGGTCCTCATGTaGCTTTCTGAAGAGCTCCTGCAGCAGGCCCAGGCTACAGTGGCC +
Preference number: 1 (lower is better)
Translates to: DLVFYQKLRQTVVLM*LSEELLQQAQATVA
Trigger: GGCCACTGTAGCCTGGGCCTGCTGCAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTAAAACACAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR TCA 90 bp GTTTTACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTaGAGAGCTCCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCA +
Preference number: 1 (lower is better)
Translates to: VLPETEANRGPHVPF*RAPAAGPGYSGQVS
Trigger: TGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR CCA 90 bp GTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTaGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTA +
Preference number: 1 (lower is better)
Translates to: VMALDGGCRRLLMSP*AFTGYADRGLFCLV
Trigger: TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR CCA 90 bp CCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGGATaGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACAGG +
Preference number: 1 (lower is better)
Translates to: PGYSGQVSLDSNGIG*WLQKVTDVPVGFHR
Trigger: CCTGTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR CCA 90 bp GGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGGATGGTaGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACAGGCTA +
Preference number: 1 (lower is better)
Translates to: GYSGQVSLDSNGIGW*LQKVTDVPVGFHRL
Trigger: TAGCCTGTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR TCA 90 bp ATACCCTTTGCAGGGGCACTCCAGACCTTGTGTTTTACCAGAAACTaGGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGC +
Preference number: 1 (lower is better)
Translates to: IPFAGALQTLCFTRN*GKPWSSCAFLKSSC
Trigger: GCAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTAAAACACAAGGTCTGGAGTGCCCCTGCAAAGGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR GCA 90 bp ACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGGATGGTGGCTaGAGAAGGTTACTGATGTCCCCGTGGGCTTTCACAGGCTATGCA +
Preference number: 1 (lower is better)
Translates to: TVAKSHLTVMALDGG*RRLLMSPWAFTGYA
Trigger: TGCATAGCCTGTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAGTGAGACTTGGCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR GCA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATaGAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATT +
Preference number: 1 (lower is better)
Translates to: QSEKNILPKCVQPTR*STAGVGRDWTHQHI
Trigger: AATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CCA 90 bp AGCACACGGTCTAGGGCTTCTGTCACAGGCATGGGACTACTTTCCTaGGCAGCATTGATAATATTGATTACCTTGGTGATGGGCGCCTCA +
Preference number: 1 (lower is better)
Translates to: STRSRASVTGMGLLS*AALIILITLVMGAS
Trigger: TGAGGCGCCCATCACCAAGGTAATCAATATTATCAATGCTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAGCCCTAGACCGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR TCA 90 bp GTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCT +
Preference number: 1 (lower is better)
Translates to: VVSGWKLQLHGRQQL*RLVSLFSCLYVCLS
Trigger: AGACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR GCA 90 bp GAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTaGAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGC +
Preference number: 1 (lower is better)
Translates to: EKYSSEMRAAHSMQY*RGRQGLDTSAHLIS
Trigger: GCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CCA 90 bp CTTCGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATaGGGATCATCATCTTTAGCACCAAACTGTGGTGAATATAACTCA +
Preference number: 1 (lower is better)
Translates to: LRKPSDIKPPTRSLA*GSSSLAPNCGEYNS
Trigger: TGAGTTATATTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR TCA 90 bp AAGTCACTCTCAGTAGTGTTCCCAAGTGAGCGATTGCACCTTCTATaGTGTGAAAAAGTTGCTAAAGATCCTATTGCCATTAGCCGTTCT +
Preference number: 1 (lower is better)
Translates to: KSLSVVFPSERLHLL*CEKVAKDPIAISRS
Trigger: AGAACGGCTAATGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGAACACTACTGAGAGTGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR GCA 90 bp ATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGCTaGATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCATCAAAC +
Preference number: 1 (lower is better)
Translates to: ISSSPFQYLKLLSRC*IKSGRSTKASQASN
Trigger: GTTTGATGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGGRQQL*RLVSLF
Trigger: GAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCC...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp GAAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACAGTGTCGTCTCTGGCTaGAAACTTCAGTTGCACGGG +
Preference number: 2 (lower is better)
Translates to: EMRAAHSMQYCRGRQGLDSVVSG*KLQLHG
Trigger: CCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACT...GTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp ATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACACTTCTGTCACAGGCATaGGACTACTTTCCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: MRAAHSMQYCRGRQGLDTLLSQA*DYFPGQ
Trigger: CTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAG...TGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACAGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTGRQQL*RLVSLF
Trigger: GAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCC...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACAAGTGTCGTCTCTGGCTaGAAACTTCAGTTGCACGGG +
Preference number: 2 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTSVVSG*KLQLHG
Trigger: CCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACT...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTACCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 2 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp GAAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACCCCCAACAAGGTCATTaGCATGGGGATCATCATCTT +
Preference number: 2 (lower is better)
Translates to: EMRAAHSMQYCRGRQGLDPQQGH*HGDHHL
Trigger: AAGATGATGATCCCCATGCCAATGACCTTGTTGGGG...GTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CAA 90 bp GAAGAGCTCCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTaGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATG +
Preference number: 2 (lower is better)
Translates to: EELLQQAQATVAKSH*TVMALDGGCRRLLM
Trigger: CATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGGAGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHRTKEL*LPSGIP
Trigger: TGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCT...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR TCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCGCTGCAGAAGGTTACTaGTGTCCCCGTGGGCTTTCA +
Preference number: 2 (lower is better)
Translates to: YLGELPVKCIRRLELFQSAAEGY*CPRGLS
Trigger: TGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGC...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACAGGCTATaGAGATCGGGGGCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVGFHRL*RSGAVL
Trigger: CAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCC...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTACACAGGAAGGAGTTaGTTCTCCCAGGGTGATCCA +
Preference number: 2 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPYTGRS*FSQGDP
Trigger: TGGATCACCCTGGGAGAACCAACTCCTTCCTGTGTA...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CAA 90 bp ATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATaGGACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTC +
Preference number: 2 (lower is better)
Translates to: MRAAHSMQYCRGRQG*DTSAHLISIRLIRV
Trigger: GACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGCCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 2 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 2 (lower is better)
Translates to: YLGELPVKCIRRLELFQSDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCACCGTGGTCCTCATGTaGCTTTCTGAAGAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: YLGELPVKCIRRLELFQSTVVLM*LSEELL
Trigger: CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp CAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAAAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: QLSWNVSGPWKSVVSGWKRTKEL*LPSGIP
Trigger: TGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCT...TTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp ATGGCCCGAGCTATCCGTGGTGGGACATCATCAAGGGAGATGGGAGTGATTATAAGTGTCGTCTCTGGCTaGAAACTTCAGTTGCACGGG +
Preference number: 2 (lower is better)
Translates to: MARAIRGGTSSREMGVIISVVSG*KLQLHG
Trigger: CCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACT...TATAATCACTCCCATCTCCCTTGATGATGTCCCACCACGGATAGCTCGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp CAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 2 (lower is better)
Translates to: QYCRGRQGLDTSAHLISIPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...AATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCAGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 2 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQADRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCAGCCCAGACGAGCTTCTaGTTGGGTGATACCCGGCTG +
Preference number: 2 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAAQTSF*LGDTRL
Trigger: CAGCCGGGTATCACCCAAGCAGAAGCTCGTCTGGGC...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR-3UTR CCA 90 bp CGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCAGCGCCTCAATTGTCATaGAATGTATCCGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: RKPSDIKPPTRSLAWGSSAPQLS*NVSGPW
Trigger: CCATGGCCCGGATACATTCCATGACAATTGAGGCGC...TGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp CCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGGCCAAGGCCGCATGGTaGCTCTCCAGCACAGCAGTG +
Preference number: 2 (lower is better)
Translates to: PQLHFVQSFPVFKVVVKMAKAAW*LSSTAV
Trigger: CACTGCTGTGCTGGAGAGCCACCATGCGGCCTTGGC...CATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp TTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCTCAGACGAGCTTCTGCTTaGGTGATACCCGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: LYKMASSLPALHRKELVLRRASA*VIPGWA
Trigger: AGCCCAGCCGGGTATCACCCAAGCAGAAGCTCGTCT...GAGAACCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR-3UTR CCA 90 bp CAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAAACCCACGAAGAATTCTaGAGCCCAGACGAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: QLSWNVSGPWKSVVSGWKTHEEF*SPDELL
Trigger: CAGAAGCTCGTCTGGGCTCCAGAATTCTTCGTGGGT...TTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR CAA 90 bp GCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTaGCAGGGGCACTCCAGACCTTGTGTTTTACCAGAAACTGAGGCA +
Preference number: 2 (lower is better)
Translates to: AIDMLCHWQEVHQYP*QGHSRPCVLPETEA
Trigger: TGCCTCAGTTTCTGGTAAAACACAAGGTCTGGAGTGCCCCTGCAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR CAA 90 bp TGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTC +
Preference number: 2 (lower is better)
Translates to: CRLWLETSVAREATA*TSSEPFLLSLCLPV
Trigger: GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATGCTGCAGAAGGTTACTaGTGTCCCCGTGGGCTTTCA +
Preference number: 2 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHAAEGY*CPRGLS
Trigger: TGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGC...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR TCA 90 bp CATGTCGATAATCCCCTGGCGCAGTGTCCGATAATCATTCCTCTCCATGTTTTTGAATGGTGGCTGCGATaGGTGCAGCGACCTCATCAA +
Preference number: 2 (lower is better)
Translates to: HVDNPLAQCPIIIPLHVFEWWLR*VQRPHQ
Trigger: TTGATGAGGTCGCTGCACTCATCGCAGCCACCATTC...AAAAACATGGAGAGGAATGATTATCGGACACTGCGCCAGGGGATTATCGACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTCCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 2 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 2 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHRTKEL*LPSGIP
Trigger: TGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCT...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTATCAAAGGCCTATTGTaGGTGGCAGCCTCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFIKGLL*VAASSS
Trigger: TGAACTGGAGGCTGCCACCCACAATAGGCCTTTGAT...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTTACACAGGAAGGAGTTaGTTCTCCCAGGGTGATCCA +
Preference number: 2 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFYTGRS*FSQGDP
Trigger: TGGATCACCCTGGGAGAACCAACTCCTTCCTGTGTA...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGCTCAGGAATTCCAAATaGCCGAAGGAACAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLLRNSK*PKEQSF
Trigger: GAAGCTTTGTTCCTTCGGTCATTTGGAATTCCTGAG...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR TCA 90 bp TGTCATTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: CHCTKWPAHFQHYTGRSWGRQQL*RLVSLF
Trigger: GAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCC...CCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp TCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCATCTTTAGCACCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 2 (lower is better)
Translates to: SDIKPPTRSLAWGSSSLAPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...TGCTAAAGATGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp CATGTCGATAATCCCCTGGCGCAGTGTCCGATAATCATTCCTCTCCATGTTTTTGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 2 (lower is better)
Translates to: HVDNPLAQCPIIIPLHVFDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...AAAAACATGGAGAGGAATGATTATCGGACACTGCGCCAGGGGATTATCGACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGGTGGCTGCGATGAGTaGAGCGACCTCATCAATTGG +
Preference number: 2 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVGGCDE*SDLINW
Trigger: CCAATTGATGAGGTCGCTGCACTCATCGCAGCCACC...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp AGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAATTCTTCCGAAATGCGTaGAGCCCACTCGATGCAGTA +
Preference number: 2 (lower is better)
Translates to: RWSEVPQLHFVQSFPVFKFFRNA*SPLDAV
Trigger: TACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAA...TTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp GTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCCATTGTTGTTTCAAATaGAGGATTTGCATACGTGGC +
Preference number: 2 (lower is better)
Translates to: VSSLAGNFSCTGGNSFDVHCCFK*RICIRG
Trigger: GCCACGTATGCAAATCCTGCATTTGAAACAACAATG...GACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR-3UTR CCA 90 bp AAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: KSKAYCGWQPPVQKYQSPRTKEL*LPSGIP
Trigger: TGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCT...GGGACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTTTACTGATGTCCCCGTaGGCTTTCACAGGCTATGCA +
Preference number: 2 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTLLMSP*AFTGYA
Trigger: TGCATAGCCTGTGAAAGCCCACGGGGACATCAGTAA...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGAGTAATGGCATTGGATaGTGGCTGCAGAAGGTTACT +
Preference number: 2 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLSNGIG*WLQKVT
Trigger: AGTAACCTTCTGCAGCCACCATCCAATGCCATTACT...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp TTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCTCCTTCTGTCACAGGCATaGGACTACTTTCCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: LYKMASSLPALHRKELVLLLSQA*DYFPGQ
Trigger: CTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAG...GAGAACCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp TTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCATAGTGTTTATCACTTCCTGGCCGAGCTATCCGTGGTaGGACATCATCAAGGGAGAT +
Preference number: 2 (lower is better)
Translates to: LIRVRFSGVLSIVFITSWPSYPW*DIIKGD
Trigger: ATCTCCCTTGATGATGTCCCACCACGGATAGCTCGG...CCAGGAAGTGATAAACACTATGCTTAGGACTCCAGAGAACCGGACCCTAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp AGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAATCAAAGGCCTATTGTaGGTGGCAGCCTCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: RWSEVPQLHFVQSFPVFKIKGLL*VAASSS
Trigger: TGAACTGGAGGCTGCCACCCACAATAGGCCTTTGAT...TTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTAGTAGTGTTCCCAAGTaGGCGATTGCACCTTCTATG +
Preference number: 2 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTSSVPK*AIAPSM
Trigger: CATAGAAGGTGCAATCGCTCACTTGGGAACACTACT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR TCA 90 bp ATGGCCCGAGCTATCCGTGGTGGGACATCATCAAGGGAGATGGGAGTGATTATATTCCTCCCTGTCCAATaGCAGGTATTATCTTCACAT +
Preference number: 2 (lower is better)
Translates to: MARAIRGGTSSREMGVIIFLPVQ*QVLSSH
Trigger: ATGTGAAGATAATACCTGTCATTGGACAGGGAGGAA...TATAATCACTCCCATCTCCCTTGATGATGTCCCACCACGGATAGCTCGGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
3UTR-3UTR TCA 90 bp AGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAACATACGTGGCAGTTGTaGAGCCATAAGCACATAACC +
Preference number: 2 (lower is better)
Translates to: RWSEVPQLHFVQSFPVFKHTWQL*SHKHIT
Trigger: GGTTATGTGCTTATGGCTTCACAACTGCCACGTATG...TTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR-3UTR GCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 2 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATTCCATCAATACCCTTTaGAGGGGCACTCCAGACCTT +
Preference number: 2 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHSINTL*RGTPDL
Trigger: AAGGTCTGGAGTGCCCCTGCAAAGGGTATTGATGGA...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp AAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCGCGCCTCAATTGTCATaGAATGTATCCGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: KSKAYCGWQPPVQKYQSPAPQLS*NVSGPW
Trigger: CCATGGCCCGGATACATTCCATGACAATTGAGGCGC...GGGACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp GGATTGGACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCGCGCCTCAATTGTCATaGAATGTATCCGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: GLDTSAHLISIRLIRVRFAPQLS*NVSGPW
Trigger: CCATGGCCCGGATACATTCCATGACAATTGAGGCGC...GAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp TATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAAGGCTTCTGTCACAGGCATaGGACTACTTTCCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: YSFPDSLRKPSDIKPPTRLLSQA*DYFPGQ
Trigger: CTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAG...CCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCACCGAGCTATCCGTGGTaGGACATCATCAAGGGAGAT +
Preference number: 2 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAPSYPW*DIIKGD
Trigger: ATCTCCCTTGATGATGTCCCACCACGGATAGCTCGG...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CAA 90 bp GGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTaGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCATAGTGTTTATC +
Preference number: 2 (lower is better)
Translates to: GRQGLDTSAHLISIR*IRVRFSGVLSIVFI
Trigger: GATAAACACTATGCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCATTCCTCCCTGTCCAATaGCAGGTATTATCTTCACAT +
Preference number: 2 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQAFLPVQ*QVLSSH
Trigger: ATGTGAAGATAATACCTGTCATTGGACAGGGAGGAA...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
3UTR-3UTR GCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACAGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 2 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAGGCTTTCACAGGCTATaGAGATCGGGGGCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILGFHRL*RSGAVL
Trigger: CAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCC...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGGCTTTCACAGGCTATaGAGATCGGGGGCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPGFHRL*RSGAVL
Trigger: CAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCAGCTGGAAACTTCAGTTaGACGGGAGGCAACAGCTTT +
Preference number: 2 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAAGNFS*TGGNSF
Trigger: AAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGC...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILRTKEL*LPSGIP
Trigger: TGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCT...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGTTACTGATGTCCCCGTaGGCTTTCACAGGCTATGCA +
Preference number: 2 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLLLMSP*AFTGYA
Trigger: TGCATAGCCTGTGAAAGCCCACGGGGACATCAGTAA...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp TTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCATAGTGTTTATCACTTCCTGGGAAGAGTGTCGTCTCTaGCTGGAAACTTCAGTTGCA +
Preference number: 2 (lower is better)
Translates to: LIRVRFSGVLSIVFITSWEECRL*LETSVA
Trigger: TGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTC...CCAGGAAGTGATAAACACTATGCTTAGGACTCCAGAGAACCGGACCCTAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp ATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCTTGAATGTATCCGGGCCATaGAAGAGTGTCGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: MSAATSSIGSKVSFILSLNVSGP*KSVVSG
Trigger: GCCAGAGACGACACTCTTCCATGGCCCGGATACATT...CAAGGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCAAGGCCTATTGTGGGTaGCAGCCTCCAGTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSKAYCG*QPPVQK
Trigger: TTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTT...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp TTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCATAGTGTTTATCACTTCCTGGCTCAGGAATTCCAAATaGCCGAAGGAACAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: LIRVRFSGVLSIVFITSWLRNSK*PKEQSF
Trigger: GAAGCTTTGTTCCTTCGGTCATTTGGAATTCCTGAG...CCAGGAAGTGATAAACACTATGCTTAGGACTCCAGAGAACCGGACCCTAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAACCGTGGTCCTCATGTaGCTTTCTGAAGAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPTVVLM*LSEELL
Trigger: CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGT...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp CCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGGCTGGAAACTTCAGTTaGACGGGAGGCAACAGCTTT +
Preference number: 2 (lower is better)
Translates to: PQLHFVQSFPVFKVVVKMAGNFS*TGGNSF
Trigger: AAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGC...CATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp CAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTTTCAAATGCAGGATTTaGATACGTGGCAGTTGTGAA +
Preference number: 2 (lower is better)
Translates to: QYCRGRQGLDTSAHLISIFKCRI*IRGSCE
Trigger: TTCACAACTGCCACGTATGCAAATCCTGCATTTGAA...AATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR-3UTR CCA 90 bp TCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCCTCCGTTTTTCTTTTTaGCATAGTAAATTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: SMQYCRGRQGLDTSAHLILRFSF*HSKFLA
Trigger: GGCAAGGAATTTACTATGCCAAAAAGAAAAACGGAG...GATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
3UTR-3UTR CCA 90 bp AGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAACAAGGTCATTGGCATaGGGATCATCATCTTTAGCA +
Preference number: 2 (lower is better)
Translates to: RWSEVPQLHFVQSFPVFKTRSLA*GSSSLA
Trigger: TGCTAAAGATGATGATCCCCATGCCAATGACCTTGT...TTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CAA 90 bp GATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATaGGCATGGGGATCATCATCTTTAGCACCAAACTGTGGTGAATAT +
Preference number: 2 (lower is better)
Translates to: DSLRKPSDIKPPTRS*AWGSSSLAPNCGEY
Trigger: ATATTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCTCAGGAATTCCAAATaGCCGAAGGAACAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLLRNSK*PKEQSF
Trigger: GAAGCTTTGTTCCTTCGGTCATTTGGAATTCCTGAG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR TCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCACGATTGCACCTTCTATaGTGTGAAAAAGTTGCTAAA +
Preference number: 2 (lower is better)
Translates to: CIRRLELFQSPGFYTVEARLHLL*CEKVAK
Trigger: TTTAGCAACTTTTTCACATCATAGAAGGTGCAATCG...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAGCATTGGATGGTGGCTaGAGAAGGTTACTGATGTCC +
Preference number: 2 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILALDGG*RRLLMS
Trigger: GGACATCAGTAACCTTCTGCAGCCACCATCCAATGC...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCATCCATCAATACCCTTTaGAGGGGCACTCCAGACCTT +
Preference number: 2 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPSINTL*RGTPDL
Trigger: AAGGTCTGGAGTGCCCCTGCAAAGGGTATTGATGGA...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAACTGAGAGAATTGTTTaGAATAGACATGCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: CIRRLELFQSPGFYTVEATERIV*NRHALS
Trigger: TGACAGAGCATGTCTATTGCAAACAATTCTCTCAGT...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR GCA 90 bp TCATTGGCATGGGGATCATCATCTTTAGCACCAAACTGTGGTGAATATAACTCAGCTGGAAACTTCAGTTaGACGGGAGGCAACAGCTTT +
Preference number: 2 (lower is better)
Translates to: SLAWGSSSLAPNCGEYNSAGNFS*TGGNSF
Trigger: AAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGC...TGAGTTATATTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR GCA 90 bp AGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAATTGTTGTCAAGATGCTaGATTAAATCAGGCAGGTCT +
Preference number: 2 (lower is better)
Translates to: RWSEVPQLHFVQSFPVFKLLSRC*IKSGRS
Trigger: AGACCTGCCTGATTTAATGCAGCATCTTGACAACAA...TTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTAATTGTGGTAGGGATTaGAGGAATGATAATTGGCTT +
Preference number: 2 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFNCGRD*RNDNWL
Trigger: AAGCCAATTATCATTCCTCCAATCCCTACCACAATT...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTTGTCATTGTACAAAATaGCCAGCTCACTTCCAGCAT +
Preference number: 2 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTCHCTK*PAHFQH
Trigger: ATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CAA 90 bp AGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTaGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCA +
Preference number: 2 (lower is better)
Translates to: RFRSFISSSPFQYLK*LSRCCIKSGRSTKA
Trigger: TGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCATGTTTTACCAGAAACTaGGGCAAACCGTGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPCFTRN*GKPWSS
Trigger: TGAGGACCACGGTTTGCCTCAGTTTCTGGTAAAACA...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGACATGCTCTGTCACTaGCAGGAAGTCCATCAATAC +
Preference number: 2 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPDMLCH*QEVHQY
Trigger: GTATTGATGGACTTCCTGCCAGTGACAGAGCATGTC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CCA 90 bp GCATTGATAATATTGATTACCTTGGTGATGGGCGCCTCAATTGTCATGGAATGTGAAGAGTGTCGTCTCTaGCTGGAAACTTCAGTTGCA +
Preference number: 2 (lower is better)
Translates to: ALIILITLVMGASIVMECEECRL*LETSVA
Trigger: TGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTC...ACATTCCATGACAATTGAGGCGCCCATCACCAAGGTAATCAATATTATCAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCCAACAAGGTCATTaGCATGGGGATCATCATCTT +
Preference number: 2 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSPQQGH*HGDHHL
Trigger: AAGATGATGATCCCCATGCCAATGACCTTGTTGGGG...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp TTATCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGCTCAGGAATTCCAAATaGCCGAAGGAACAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: LSVSPFSSSVAKGLLMLLLRNSK*PKEQSF
Trigger: GAAGCTTTGTTCCTTCGGTCATTTGGAATTCCTGAG...CAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR TCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCACTCAGGAATTCCAAATaGCCGAAGGAACAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPLRNSK*PKEQSF
Trigger: GAAGCTTTGTTCCTTCGGTCATTTGGAATTCCTGAG...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR TCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATCGATTGCACCTTCTATaGTGTGAAAAAGTTGCTAAA +
Preference number: 2 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHRLHLL*CEKVAK
Trigger: TTTAGCAACTTTTTCACATCATAGAAGGTGCAATCG...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR TCA 90 bp CCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGCAAGGGAGATGGGAGTaGTTATATTGCTTGAAACCA +
Preference number: 2 (lower is better)
Translates to: PQLHFVQSFPVFKVVVKMQGRWE*LYCLKP
Trigger: TGGTTTCAAGCAATATAATCACTCCCATCTCCCTTG...CATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp ATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCTTGACAAGGTCATTGGCATaGGGATCATCATCTTTAGCA +
Preference number: 2 (lower is better)
Translates to: MSAATSSIGSKVSFILSLTRSLA*GSSSLA
Trigger: TGCTAAAGATGATGATCCCCATGCCAATGACCTTGT...CAAGGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTACAAGGTCATTGGCATaGGGATCATCATCTTTAGCA +
Preference number: 2 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSTRSLA*GSSSLA
Trigger: TGCTAAAGATGATGATCCCCATGCCAATGACCTTGT...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp GACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAAATTGTGGTAGGGATTaGAGGAATGATAATTGGCTT +
Preference number: 2 (lower is better)
Translates to: DTSAHLISIRLIRVRFSGNCGRD*RNDNWL
Trigger: AAGCCAATTATCATTCCTCCAATCCCTACCACAATT...TCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACACTCCGTTTTTCTTTTTaGCATAGTAAATTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTLRFSF*HSKFLA
Trigger: GGCAAGGAATTTACTATGCCAAAAAGAAAAACGGAG...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
3UTR-3UTR CAA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACCCCCAACAAGGTCATaGGCATGGGGATCATCATCT +
Preference number: 3 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTPPTRS*AWGSSS
Trigger: AGATGATGATCCCCATGCCAATGACCTTGTTGGGGG...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR GCA 72 bp TGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCAAGGAGCTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: WAFTGYADRGLF*LVLKGPRSSGC
Trigger: GCAGCCAGAGCTCCTTGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR GCA 72 bp TCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTaGAGGGGTCGGCAGGGATTGGACACATCAGCACAT +
Preference number: 3 (lower is better)
Translates to: SSEMRAAHSMQY*RGRQGLDTSAH
Trigger: ATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CCA 72 bp TTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTaGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: LDGGCRRLLMSP*AFTGYADRGLF
Trigger: GAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CAA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACAATTCCTTGCCACTCCTaGCCTATCCTGATGCATGAA +
Preference number: 3 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTIPCHS*PILMHE
Trigger: TTCATGCATCAGGATAGGCAAGGAGTGGCAAGGAAT...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
3UTR-3UTR CAA 90 bp TCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGGGCATAGTAAATTCCTaGCCACTCCTTGCCTATCCT +
Preference number: 3 (lower is better)
Translates to: SGPWKSVVSGWKLQLHGRGIVNS*PLLAYP
Trigger: AGGATAGGCAAGGAGTGGCAAGGAATTTACTATGCC...CCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
3UTR-3UTR CAA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCGCCTTATTGTTGCCATaGCACACTCTGATAATGGAC +
Preference number: 3 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGALLLP*HTLIMD
Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGC...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGGGCTGGAAACTTCAGTaGCACGGGAGGCAACAGCTT +
Preference number: 3 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVGWKLQ*HGRQQL
Trigger: AAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CCA 72 bp AGTGGCCAAGTCTCACTTGACAGTAATGGCATTGGATaGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGC +
Preference number: 3 (lower is better)
Translates to: SGQVSLDSNGIG*WLQKVTDVPVG
Trigger: GCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAGTGAGACTTGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CAA 90 bp ATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACATTCTCAGCCTTATTGTaGCCATTGCACACTCTGATA +
Preference number: 3 (lower is better)
Translates to: MRAAHSMQYCRGRQGLDTFSALL*PLHTLI
Trigger: TATCAGAGTGTGCAATGGCAACAATAAGGCTGAGAA...TGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GAAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACATTTTCTCAGCCTTATaGTTGCCATTGCACACTCTG +
Preference number: 3 (lower is better)
Translates to: EMRAAHSMQYCRGRQGLDIFSAL*LPLHTL
Trigger: CAGAGTGTGCAATGGCAACAATAAGGCTGAGAAAAT...GTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGCGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTT +
Preference number: 3 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVREATA*TSSEPF
Trigger: AAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCCAGACGAGCTTCTGCTaGGGTGATACCCGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVQTSFC*GDTRLG
Trigger: GCCCAGCCGGGTATCACCCAAGCAGAAGCTCGTCTG...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR CCA 72 bp GCTGTTCTGCCTAGTACTGAAAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCAAATGACCGAAGGAAC +
Preference number: 3 (lower is better)
Translates to: AVLPSTERTKEL*LPSGIPNDRRN
Trigger: GTTCCTTCGGTCATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCTTTCAGTACTAGGCAGAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310298.8
ENST00000339708.9
ENST00000394553.6
ENST00000478717.5
ENST00000485596.5
ENST00000557957.5
ENST00000559742.5
3UTR CCA 72 bp TGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATaGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTG +
Preference number: 3 (lower is better)
Translates to: WAPQLSWNVSGP*KSVVSGWKLQL
Trigger: CAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp ATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACAATGCTGTTGACAAATTaGTTGACATGCTCAAAGTGC +
Preference number: 3 (lower is better)
Translates to: MRAAHSMQYCRGRQGLDTMLLTN*LTCSKC
Trigger: GCACTTTGAGCATGTCAACAAATTTGTCAACAGCAT...TGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCTTGACAGTAATGGCATaGGATGGTGGCTGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: YLGELPVKCIRRLELFQSLTVMA*DGGCRR
Trigger: CCTTCTGCAGCCACCATCCAATGCCATTACTGTCAA...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CAA 90 bp GTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCGCCTTATTGTTGCCATaGCACACTCTGATAATGGAC +
Preference number: 3 (lower is better)
Translates to: VSSLAGNFSCTGGNSFDVALLLP*HTLIMD
Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGC...GACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp CAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTT +
Preference number: 3 (lower is better)
Translates to: QYCRGRQGLDTSAHLISIREATA*TSSEPF
Trigger: AAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG...AATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR GCA 72 bp AAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATaGAGTACTGCAGGGGTCGGCAGGGATTGGACACAT +
Preference number: 3 (lower is better)
Translates to: KNILPKCVQPTR*STAGVGRDWTH
Trigger: ATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCGTGGCCAAGTCTCACTaGACAGTAATGGCATTGGAT +
Preference number: 3 (lower is better)
Translates to: YLGELPVKCIRRLELFQSVAKSH*TVMALD
Trigger: ATCCAATGCCATTACTGTCAAGTGAGACTTGGCCAC...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CAA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTATTTTCTCAGCCTTATaGTTGCCATTGCACACTCTG +
Preference number: 3 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPIFSAL*LPLHTL
Trigger: CAGAGTGTGCAATGGCAACAATAAGGCTGAGAAAAT...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GCGATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCGGCTGGAAACTTCAGTaGCACGGGAGGCAACAGCTT +
Preference number: 3 (lower is better)
Translates to: AMSAATSSIGSKVSFILSGWKLQ*HGRQQL
Trigger: AAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC...GGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR GCA 72 bp TTCTGCCTAGTACTGAAAGGACCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATGACCGAAGGAACAAAG +
Preference number: 3 (lower is better)
Translates to: FCLVLKGPRSSG*PQEFQMTEGTK
Trigger: CTTTGTTCCTTCGGTCATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCTTTCAGTACTAGGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310298.8
ENST00000339708.9
ENST00000394553.6
ENST00000478717.5
ENST00000485596.5
ENST00000557957.5
ENST00000559742.5
3UTR GCA 72 bp AAGTCTCACTTGACAGTAATGGCATTGGATGGTGGCTaGAGAAGGTTACTGATGTCCCCGTGGGCTTTCACA +
Preference number: 3 (lower is better)
Translates to: KSHLTVMALDGG*RRLLMSPWAFT
Trigger: TGTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAGTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR GCA 72 bp TGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTaGAGGGGCACTCCAGACCTTGTGTTTTACCAGAAA +
Preference number: 3 (lower is better)
Translates to: CSVTGRKSINTL*RGTPDLVFYQK
Trigger: TTTCTGGTAAAACACAAGGTCTGGAGTGCCCCTGCAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR CCA 72 bp CCAGTATTCCTCATTTTCCATGGCCCGAGCTATCCGTaGTGGGACATCATCAAGGGAGATGGGAGTGATTAT +
Preference number: 3 (lower is better)
Translates to: PVFLIFHGPSYP*WDIIKGDGSDY
Trigger: ATAATCACTCCCATCTCCCTTGATGATGTCCCACCACGGATAGCTCGGGCCATGGAAAATGAGGAATACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGTGGCCAAGTCTCACTaGACAGTAATGGCATTGGAT +
Preference number: 3 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAVAKSH*TVMALD
Trigger: ATCCAATGCCATTACTGTCAAGTGAGACTTGGCCAC...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CAA 90 bp TATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAAGGGGCTGGAAACTTCAGTaGCACGGGAGGCAACAGCTT +
Preference number: 3 (lower is better)
Translates to: YSFPDSLRKPSDIKPPTRGWKLQ*HGRQQL
Trigger: AAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC...CCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR TCA 72 bp GGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTT +
Preference number: 3 (lower is better)
Translates to: GWKLQLHGRQQL*RLVSLFSCLYV
Trigger: AACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp TCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCTTCTCAGCCTTATTGTaGCCATTGCACACTCTGATA +
Preference number: 3 (lower is better)
Translates to: SMQYCRGRQGLDTSAHLIFSALL*PLHTLI
Trigger: TATCAGAGTGTGCAATGGCAACAATAAGGCTGAGAA...GATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGACCCCCAACAAGGTCATaGGCATGGGGATCATCATCT +
Preference number: 3 (lower is better)
Translates to: DTSAHLISIRLIRVRFSGPPTRS*AWGSSS
Trigger: AGATGATGATCCCCATGCCAATGACCTTGTTGGGGG...TCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGTCCATCAATACCCTTaGCAGGGGCACTCCAGACCT +
Preference number: 3 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPVHQYP*QGHSRP
Trigger: AGGTCTGGAGTGCCCCTGCAAAGGGTATTGATGGAC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CAA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCGGCATAGTAAATTCCTaGCCACTCCTTGCCTATCCT +
Preference number: 3 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVGIVNS*PLLAYP
Trigger: AGGATAGGCAAGGAGTGGCAAGGAATTTACTATGCC...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
3UTR-3UTR CAA 90 bp AGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGCCTTATTGTTGCCATaGCACACTCTGATAATGGAC +
Preference number: 3 (lower is better)
Translates to: RWSEVPQLHFVQSFPVFKALLLP*HTLIMD
Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGC...TTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp CAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCTGACTGATAGCCCATaGTTGTTTCAAATGCAGGAT +
Preference number: 3 (lower is better)
Translates to: QYCRGRQGLDTSAHLISILTDSP*LFQMQD
Trigger: ATCCTGCATTTGAAACAACAATGGGCTATCAGTCAG...AATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR CCA 72 bp CCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATaGGGATCATCATCTTTAGCACCAAACTGTGGTGAA +
Preference number: 3 (lower is better)
Translates to: PSDIKPPTRSLA*GSSSLAPNCGE
Trigger: TTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CCA 72 bp GTATTCCTCATTTTCCATGGCCCGAGCTATCCGTGGTaGGACATCATCAAGGGAGATGGGAGTGATTATATT +
Preference number: 3 (lower is better)
Translates to: VFLIFHGPSYPW*DIIKGDGSDYI
Trigger: AATATAATCACTCCCATCTCCCTTGATGATGTCCCACCACGGATAGCTCGGGCCATGGAAAATGAGGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCATTGCTAAAGATCCTATaGCCATTAGCCGTTCTTAAG +
Preference number: 3 (lower is better)
Translates to: CIRRLELFQSPGFYTVEALLKIL*PLAVLK
Trigger: CTTAAGAACGGCTAATGGCAATAGGATCTTTAGCAA...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR-3UTR CAA 90 bp TCATTGGCATGGGGATCATCATCTTTAGCACCAAACTGTGGTGAATATAACTCACGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTT +
Preference number: 3 (lower is better)
Translates to: SLAWGSSSLAPNCGEYNSREATA*TSSEPF
Trigger: AAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG...TGAGTTATATTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCAATAATATTGATTACCTaGGTGATGGGCGCCTCAATT +
Preference number: 3 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQAIILIT*VMGASI
Trigger: AATTGAGGCGCCCATCACCAAGGTAATCAATATTAT...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAACCATGATCTTAGCGTaGACTCGGAGCAGTGTAAGA +
Preference number: 3 (lower is better)
Translates to: DTSAHLISIRLIRVRFSGTMILA*TRSSVR
Trigger: TCTTACACTGCTCCGAGTCAACGCTAAGATCATGGT...TCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp ATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCTTGATTCCTTGCCACTCCTaGCCTATCCTGATGCATGAA +
Preference number: 3 (lower is better)
Translates to: MSAATSSIGSKVSFILSLIPCHS*PILMHE
Trigger: TTCATGCATCAGGATAGGCAAGGAGTGGCAAGGAAT...CAAGGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
3UTR-3UTR CAA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCTTCTCAGCCTTATTGTaGCCATTGCACACTCTGATA +
Preference number: 3 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSFSALL*PLHTLI
Trigger: TATCAGAGTGTGCAATGGCAACAATAAGGCTGAGAA...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GCGATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCGCAGCATTGATAATATaGATTACCTTGGTGATGGGC +
Preference number: 3 (lower is better)
Translates to: AMSAATSSIGSKVSFILSAALII*ITLVMG
Trigger: GCCCATCACCAAGGTAATCAATATTATCAATGCTGC...GGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCGCAGCATTGATAATATaGATTACCTTGGTGATGGGC +
Preference number: 3 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSAALII*ITLVMG
Trigger: GCCCATCACCAAGGTAATCAATATTATCAATGCTGC...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp AGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAACTTTCCTGGGCAGCATaGATAATATTGATTACCTTG +
Preference number: 3 (lower is better)
Translates to: RWSEVPQLHFVQSFPVFKLSWAA*IILITL
Trigger: CAAGGTAATCAATATTATCAATGCTGCCCAGGAAAG...TTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCGTTGCCAAGGGTTTGTaGATGCTGTTGACAAATTTG +
Preference number: 3 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSVAKGL*MLLTNL
Trigger: CAAATTTGTCAACAGCATCAACAAACCCTTGGCAAC...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTATAATATTGATTACCTaGGTGATGGGCGCCTCAATT +
Preference number: 3 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTIILIT*VMGASI
Trigger: AATTGAGGCGCCCATCACCAAGGTAATCAATATTAT...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp TTATCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACCATGATCTTAGCGTaGACTCGGAGCAGTGTAAGA +
Preference number: 3 (lower is better)
Translates to: LSVSPFSSSVAKGLLMLLTMILA*TRSSVR
Trigger: TCTTACACTGCTCCGAGTCAACGCTAAGATCATGGT...CAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTATGCTGTTGACAAATTaGTTGACATGCTCAAAGTGC +
Preference number: 3 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTMLLTN*LTCSKC
Trigger: GCACTTTGAGCATGTCAACAAATTTGTCAACAGCAT...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp TCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCATCTTTAGCAACTGATAGCCCATTGTaGTTTCAAATGCAGGATTTG +
Preference number: 3 (lower is better)
Translates to: SDIKPPTRSLAWGSSSLATDSPL*FQMQDL
Trigger: CAAATCCTGCATTTGAAACAACAATGGGCTATCAGT...TGCTAAAGATGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR-3UTR CAA 90 bp CATATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAAATTTTCTCAGCCTTATaGTTGCCATTGCACACTCTG +
Preference number: 3 (lower is better)
Translates to: HIHSLIVFANHQTLSPQQIFSAL*LPLHTL
Trigger: CAGAGTGTGCAATGGCAACAATAAGGCTGAGAAAAT...TTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp GACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGACTTTCCTGGGCAGCATaGATAATATTGATTACCTTG +
Preference number: 3 (lower is better)
Translates to: DTSAHLISIRLIRVRFSGLSWAA*IILITL
Trigger: CAAGGTAATCAATATTATCAATGCTGCCCAGGAAAG...TCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTCAGCGACCTCATCAATaGGATCTAAAGTTTCCTTTA +
Preference number: 3 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVQRPHQ*DLKFPL
Trigger: TAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTG...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR-3UTR CAA 90 bp CCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGCAGCGACCTCATCAATaGGATCTAAAGTTTCCTTTA +
Preference number: 3 (lower is better)
Translates to: PQLHFVQSFPVFKVVVKMQRPHQ*DLKFPL
Trigger: TAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTG...CATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR TCA 72 bp TCAGTAGTGTTCCCAAGTGAGCGATTGCACCTTCTATaGTGTGAAAAAGTTGCTAAAGATCCTATTGCCATT +
Preference number: 3 (lower is better)
Translates to: SVVFPSERLHLL*CEKVAKDPIAI
Trigger: AATGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGAACACTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR GCA 72 bp AGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGCTaGATTAAATCAGGCAGGTCTACAAAGGCATCCCAA +
Preference number: 3 (lower is better)
Translates to: SPFQYLKLLSRC*IKSGRSTKASQ
Trigger: TTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAACTTTAAATACTGGAAAGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACGCCCTGGAGCGACCCTaGGAGGCAGCCGCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHALERP*EAAAPA
Trigger: GGCGGGAGCGGCTGCCTCTCAGGGTCGCTCCAGGGC...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310298.8
CDS-3UTR CCA 90 bp GCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGAAGGCGGCCGTCTTCTaGCCCTGCGGGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: ASIVMECIRAMEECRLWLKAAVF*PCGRRG
Trigger: GCCGCGCCTCCCGCAGGGCCAGAAGACGGCCGCCTT...CAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GAAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACGCCAAGGCCGCATGGTaGCTCTCCAGCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: EMRAAHSMQYCRGRQGLDAKAAW*LSSTAV
Trigger: CACTGCTGTGCTGGAGAGCCACCATGCGGCCTTGGC...GTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCGCTCGGAAATGTGGATaGTCGGGGCACAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGARKCG*SGHSPC
Trigger: GCATGGGCTGTGCCCCGAGCATCCACATTTCCGAGC...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCCTGGGCTCCCGGTTTaGGGAGACCCTGGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHPGLPV*GDPGAV
Trigger: CACCGCGCCAGGGTCTCCGCAAACCGGGAGCCCAGG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR CCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTATCTTCCCGCCCTCCCTaGGCTCCCGGTTTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVSSRPP*APGLRR
Trigger: TCTCCGCAAACCGGGAGCCCAGGGAGGGCGGGAAGA...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR CCA 90 bp GTTTCAGTTGTGATCGCACCTCTCCAAACTCCAGCTGGAGCAGTTCATTGTAGCAAGGCGGCCGTCTTCTaGCCCTGCGGGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: VSVVIAPLQTPAGAVHCSKAAVF*PCGRRG
Trigger: GCCGCGCCTCCCGCAGGGCCAGAAGACGGCCGCCTT...GCTACAATGAACTGCTCCAGCTGGAGTTTGGAGAGGTGCGATCACAACTGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR CCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGGAGGGCGGTGTCTCTaGGCGTCCATCACGTATCCT +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPGGRCL*ASITYP
Trigger: AGGATACGTGATGGACGCCCAGAGACACCGCCCTCC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR CCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTACTACTTCTTGGTGGCTaGGGCTCCTCCCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVLLLGG*GSSPTS
Trigger: GCTGGTGGGGGAGGAGCCCCAGCCACCAAGAAGTAG...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR CCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGCTACTGCTACTTCTTaGTGGCTGGGGCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPATATS*WLGLLP
Trigger: GGGGAGGAGCCCCAGCCACCAAGAAGTAGCAGTAGC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR TCA 90 bp ATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACAGAATGGTGGCTGCGATaGGTGCAGCGACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: MRAAHSMQYCRGRQGLDTEWWLR*VQRPHQ
Trigger: TTGATGAGGTCGCTGCACTCATCGCAGCCACCATTC...TGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGCGAACATGCCCTTCCTaGGGCAGGAGCCGACGGCCG +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVRTCPS*GRSRRP
Trigger: CGGCCGTCGGCTCCTGCCTCAGGAAGGGCATGTTCG...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394553.6
CDS-3UTR GCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTACTACCTTCTTGCCGCTaGCGTCGCGAAGCTCCGACT +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVLPSCR*RREAPT
Trigger: AGTCGGAGCTTCGCGACGGCAGCGGCAAGAAGGTAG...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR GCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGTGCAGCCCACTCGATaGAGTACTGCAGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIVQPTR*STAGVG
Trigger: GCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCAC...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACAGGCCCGAGCTATCCGTaGTGGGACATCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTGPSYP*WDIIKG
Trigger: TCCCTTGATGATGTCCCACCACGGATAGCTCGGGCC...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGCCAAGGCCGCATGGTaGCTCTCCAGCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIAKAAW*LSSTAV
Trigger: CACTGCTGTGCTGGAGAGCCACCATGCGGCCTTGGC...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTCTACCTTCTTGCCGCTaGCGTCGCGAAGCTCCGACT +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGILPSCR*RREAPT
Trigger: AGTCGGAGCTTCGCGACGGCAGCGGCAAGAAGGTAG...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGATAGACCTGCACAGTaGCTCTGCATCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPDRPAQ*LCIQLS
Trigger: CGACAGCTGGATGCAGAGGCACTGTGCAGGTCTATC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGGTGGCTGCGATGAGTaGAGCGACCTCATCAATTGG +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPGGCDE*SDLINW
Trigger: CCAATTGATGAGGTCGCTGCACTCATCGCAGCCACC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GAAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACATCATGAATGGTGGCTaGGATGAGTGCAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: EMRAAHSMQYCRGRQGLDIMNGG*DECSDL
Trigger: GAGGTCGCTGCACTCATCGCAGCCACCATTCATGAT...GTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTGCCCAGACGAGCTTCTaGTTGGGTGATACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPAQTSF*LGDTRL
Trigger: CAGCCGGGTATCACCCAAGCAGAAGCTCGTCTGGGC...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCTATCCTGTAGCGGGCTaGCTCGGACCCCCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSYPVAG*LGPPPV
Trigger: GACTGGCGGGGGTCCGAGGCAGCCCGCTACAGGATA...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR CCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCTTCCTAGCGCGGCCCTaGAGCGACCCTGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSFLARP*SDPERQ
Trigger: CTGCCTCTCAGGGTCGCTCCAGGGCCGCGCTAGGAA...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310298.8
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATAAGGCGGCCGTCTTCTaGCCCTGCGGGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHKAAVF*PCGRRG
Trigger: GCCGCGCCTCCCGCAGGGCCAGAAGACGGCCGCCTT...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR CCA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCGCGCCTCAATTGTCATaGAATGTATCCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGAPQLS*NVSGPW
Trigger: CCATGGCCCGGATACATTCCATGACAATTGAGGCGC...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPRTKEL*LPSGIP
Trigger: TGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCTCTACCTTCTTGCCGCTaGCGTCGCGAAGCTCCGACT +
Preference number: 4 (lower is better)
Translates to: CRLWLETSVAREATALTSLPSCR*RREAPT
Trigger: AGTCGGAGCTTCGCGACGGCAGCGGCAAGAAGGTAG...AGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTCTCATGGGGCCAAACTaGACATCAGCTACTGCTACC +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPLMGPN*TSATAT
Trigger: GGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAG...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR GCA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACTCATGGGGCCAAACTaGACATCAGCTACTGCTACC +
Preference number: 4 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTLMGPN*TSATAT
Trigger: GGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAG...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTATCATGAATGGTGGCTaGGATGAGTGCAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPIMNGG*DECSDL
Trigger: GAGGTCGCTGCACTCATCGCAGCCACCATTCATGAT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTACCGTGGTCCTCATGTaGCTTTCTGAAGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPTVVLM*LSEELL
Trigger: CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCAGGCGCTCGGAAATGTaGATGCTCGGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSRRSEM*MLGAQP
Trigger: GGGCTGTGCCCCGAGCATCCACATTTCCGAGCGCCT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGAAGGCGGCCGTCTTCTaGCCCTGCGGGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLKAAVF*PCGRRG
Trigger: GCCGCGCCTCCCGCAGGGCCAGAAGACGGCCGCCTT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR CCA 90 bp AAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCAAGGCGGCCGTCTTCTaGCCCTGCGGGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: KSKAYCGWQPPVQKYQSPKAAVF*PCGRRG
Trigger: GCCGCGCCTCCCGCAGGGCCAGAAGACGGCCGCCTT...GGGACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGCGCCTCAATTGTCATaGAATGTATCCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPAPQLS*NVSGPW
Trigger: CCATGGCCCGGATACATTCCATGACAATTGAGGCGC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCGGCCCGAGCTATCCGTaGTGGGACATCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: VSSLAGNFSCTGGNSFDVGPSYP*WDIIKG
Trigger: TCCCTTGATGATGTCCCACCACGGATAGCTCGGGCC...GACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCTACACAGGAAGGAGTTaGTTCTCCCAGGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGYTGRS*FSQGDP
Trigger: TGGATCACCCTGGGAGAACCAACTCCTTCCTGTGTA...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCGCCAAGGCCGCATGGTaGCTCTCCAGCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSAKAAW*LSSTAV
Trigger: CACTGCTGTGCTGGAGAGCCACCATGCGGCCTTGGC...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTACCACTATTCAGGAGGTaGTCGGAGGTTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVPLFRR*SEVPQL
Trigger: AAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGG...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTTCCTCCCCCACCAGCTaGAGGGCGGTGTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTSSPTS*RAVSLG
Trigger: GCCCAGAGACACCGCCCTCCAGCTGGTGGGGGAGGA...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCGCTCGGAAATGTGGATaGTCGGGGCACAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSARKCG*SGHSPC
Trigger: GCATGGGCTGTGCCCCGAGCATCCACATTTCCGAGC...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR GCA 90 bp TCGCACCTCTCCAAACTCCAGCTGGAGCAGTTCATTGTAGCAGGCCATGATGTTCTACCTTCTTGCCGCTaGCGTCGCGAAGCTCCGACT +
Preference number: 4 (lower is better)
Translates to: SHLSKLQLEQFIVAGHDVLPSCR*RREAPT
Trigger: AGTCGGAGCTTCGCGACGGCAGCGGCAAGAAGGTAG...AACATCATGGCCTGCTACAATGAACTGCTCCAGCTGGAGTTTGGAGAGGTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR GCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCTACTGCTACCTTCTTaGCGCTGCCGTCGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHLLLPS*RCRREA
Trigger: AGCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGCTGGAAACTTCAGTTaGACGGGAGGCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPAGNFS*TGGNSF
Trigger: AAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCACTCGATGCAGTACTaGAGGGGTCGGCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHHSMQY*RGRQGL
Trigger: CAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAAGTGCAGCCCACTCGATaGAGTACTGCAGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: QLSWNVSGPWKSVVSGWKVQPTR*STAGVG
Trigger: GCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCAC...TTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GAAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACAATATTCTTCCGAAATaGGTGCAGCCCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: EMRAAHSMQYCRGRQGLDNILPK*VQPTRC
Trigger: GCATCGAGTGGGCTGCACGCATTTCGGAAGAATATT...GTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGCATTGGATGGTGGCTaGAGAAGGTTACTGATGTCC +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPALDGG*RRLLMS
Trigger: GGACATCAGTAACCTTCTGCAGCCACCATCCAATGC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAACCGTGGTCCTCATGTaGCTTTCTGAAGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVTVVLM*LSEELL
Trigger: CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGT...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATGAGACCCTGGCGCGGTaGAGCCGGCTCCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHETLAR*SRLLPV
Trigger: GACAGGAAGGAGCCGGCTGCACCGCGCCAGGGTCTC...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR CCA 90 bp ATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCTTGAAGGCGGCCGTCTTCTaGCCCTGCGGGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: MSAATSSIGSKVSFILSLKAAVF*PCGRRG
Trigger: GCCGCGCCTCCCGCAGGGCCAGAAGACGGCCGCCTT...CAAGGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAAGTGTCGTCTCTGGCTaGAAACTTCAGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVSVVSG*KLQLHG
Trigger: CCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACT...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAAATGTATCCGGGCCATaGAAGAGTGTCGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVNVSGP*KSVVSG
Trigger: GCCAGAGACGACACTCTTCCATGGCCCGGATACATT...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCCCCCAACAAGGTCATTaGCATGGGGATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGPQQGH*HGDHHL
Trigger: AAGATGATGATCCCCATGCCAATGACCTTGTTGGGG...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTATTCCTCATTTTCCATaGCCCGAGCTATCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPIPHFP*PELSVV
Trigger: CACCACGGATAGCTCGGGCCATGGAAAATGAGGAAT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACAATTCCTCATTTTCCATaGCCCGAGCTATCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTIPHFP*PELSVV
Trigger: CACCACGGATAGCTCGGGCCATGGAAAATGAGGAAT...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTTACACAGGAAGGAGTTaGTTCTCCCAGGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPYTGRS*FSQGDP
Trigger: TGGATCACCCTGGGAGAACCAACTCCTTCCTGTGTA...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGAAGGCCAAGGCCGCATaGTGGCTCTCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLKAKAA*WLSSTA
Trigger: TGCTGTGCTGGAGAGCCACCATGCGGCCTTGGCCTT...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTCCACTATTCAGGAGGTaGTCGGAGGTTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPPLFRR*SEVPQL
Trigger: AAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGG...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGACTGCTACTTCTTGGTaGCTGGGGCTCCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLTATSW*LGLLPH
Trigger: GTGGGGGAGGAGCCCCAGCCACCAAGAAGTAGCAGT...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR TCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIGRQQL*RLVSLF
Trigger: GAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCC...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPGRQQL*RLVSLF
Trigger: GAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCC...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACGCTGCAGAAGGTTACTaGTGTCCCCGTGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHAAEGY*CPRGLS
Trigger: TGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGC...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAGTGTTCCCAAGTaGGCGATTGCACCTTCTATG +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPSSVPK*AIAPSM
Trigger: CATAGAAGGTGCAATCGCTCACTTGGGAACACTACT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCCTACTGCTACCTTCTTaGCGCTGCCGTCGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSLLLPS*RCRREA
Trigger: AGCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAG...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR GCA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGCCTGCACAGTGCCTCTaGATCCAGCTGTCGAGGATT +
Preference number: 4 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVPAQCL*IQLSRI
Trigger: AATCCTCGACAGCTGGATGCAGAGGCACTGTGCAGG...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAGAGTTACCTGTGAAGTaGATTAGGCGGCTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVELPVK*IRRLEL
Trigger: CAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTC...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTAGGCGCTCGGAAATGTaGATGCTCGGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTRRSEM*MLGAQP
Trigger: GGGCTGTGCCCCGAGCATCCACATTTCCGAGCGCCT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR CCA 90 bp CGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCAAAGGCCAAGGCCGCATaGTGGCTCTCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: RKPSDIKPPTRSLAWGSSKAKAA*WLSSTA
Trigger: TGCTGTGCTGGAGAGCCACCATGCGGCCTTGGCCTT...TGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCTCCACTATTCAGGAGGTaGTCGGAGGTTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CRLWLETSVAREATALTSPLFRR*SEVPQL
Trigger: AAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGG...AGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGACATGCTCTGTCACTaGCAGGAAGTCCATCAATAC +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPDMLCH*QEVHQY
Trigger: GTATTGATGGACTTCCTGCCAGTGACAGAGCATGTC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTCCTGAGTTTCAGTTGTaGTCGCACCTCTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIPEFQL*SHLSKL
Trigger: GAGTTTGGAGAGGTGCGATCACAACTGAAACTCAGG...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGAATGGTGGCTGCGATaGGTGCAGCGACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVEWWLR*VQRPHQ
Trigger: TTGATGAGGTCGCTGCACTCATCGCAGCCACCATTC...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp ATGGCCCGAGCTATCCGTGGTGGGACATCATCAAGGGAGATGGGAGTGATTATAGAATGGTGGCTGCGATaGGTGCAGCGACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: MARAIRGGTSSREMGVIIEWWLR*VQRPHQ
Trigger: TTGATGAGGTCGCTGCACTCATCGCAGCCACCATTC...TATAATCACTCCCATCTCCCTTGATGATGTCCCACCACGGATAGCTCGGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp TCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCTCAGGAATTCCAAATaGCCGAAGGAACAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SGPWKSVVSGWKLQLHGRLRNSK*PKEQSF
Trigger: GAAGCTTTGTTCCTTCGGTCATTTGGAATTCCTGAG...CCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACTCAGGAATTCCAAATaGCCGAAGGAACAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTLRNSK*PKEQSF
Trigger: GAAGCTTTGTTCCTTCGGTCATTTGGAATTCCTGAG...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTTCTGCTATGTTCTCCTaGGGCTCCAGGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFSAMFS*GSRRAA
Trigger: TGCTGCCCTCCTGGAGCCTCAGGAGAACATAGCAGA...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR GCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTCTACTGCTACCTTCTTaGCGCTGCCGTCGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFLLLPS*RCRREA
Trigger: AGCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAG...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GTTTCAGTTGTGATCGCACCTCTCCAAACTCCAGCTGGAGCAGTTCATTGTAGCCTACTGCTACCTTCTTaGCGCTGCCGTCGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: VSVVIAPLQTPAGAVHCSLLLPS*RCRREA
Trigger: AGCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAG...GCTACAATGAACTGCTCCAGCTGGAGTTTGGAGAGGTGCGATCACAACTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR GCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCTCATGGGGCCAAACTaGACATCAGCTACTGCTACC +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHLMGPN*TSATAT
Trigger: GGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR GCA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTGCTGGAAACTTCAGTTaGACGGGAGGCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPAGNFS*TGGNSF
Trigger: AAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGC...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGATCATGAATGGTGGCTaGGATGAGTGCAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: ASIVMECIRAMEECRLWLIMNGG*DECSDL
Trigger: GAGGTCGCTGCACTCATCGCAGCCACCATTCATGAT...CAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCACACTCGATGCAGTACTaGAGGGGTCGGCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQAHSMQY*RGRQGL
Trigger: CAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTG...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCATAGTGTTTATCACTTCCTGGGTGCAGCCCACTCGATaGAGTACTGCAGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: LIRVRFSGVLSIVFITSWVQPTR*STAGVG
Trigger: GCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCAC...CCAGGAAGTGATAAACACTATGCTTAGGACTCCAGAGAACCGGACCCTAATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCGTGCAGCCCACTCGATaGAGTACTGCAGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSVQPTR*STAGVG
Trigger: GCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCAC...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GAAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACTTTGGGATTTGGGGATaGTGCAGGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: EMRAAHSMQYCRGRQGLDFGIWG*CRYFCQ
Trigger: TTGACAGAAATACCTGCAGCATCCCCAAATCCCAAA...GTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCTTTGGGATTTGGGGATaGTGCAGGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGFGIWG*CRYFCQ
Trigger: TTGACAGAAATACCTGCAGCATCCCCAAATCCCAAA...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCGGCTTTCACAGGCTATaGAGATCGGGGGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSGFHRL*RSGAVL
Trigger: CAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCC...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGCATTGGATGGTGGCTaGAGAAGGTTACTGATGTCC +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIALDGG*RRLLMS
Trigger: GGACATCAGTAACCTTCTGCAGCCACCATCCAATGC...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGAGTTACCTGTGAAGTaGATTAGGCGGCTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIELPVK*IRRLEL
Trigger: CAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTC...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTACTTAGGCGGGTGGCGTaGCGAGGCCGCCCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILLRRVA*RGRPSE
Trigger: TTCGGAGGGGCGGCCTCGGCACGCCACCCGCCTAAG...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394553.6
CDS-3UTR GCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCTGCACATCAGCTACTaGTACTTCTTGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHLHISY*YFLVAG
Trigger: CCCAGCCACCAAGAAGTAGCAGTAGCTGATGTGCAG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACAGTGTCGTCTCTGGCTaGAAACTTCAGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHSVVSG*KLQLHG
Trigger: CCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACT...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGAATGTATCCGGGCCATaGAAGAGTGTCGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVNVSGP*KSVVSG
Trigger: GCCAGAGACGACACTCTTCCATGGCCCGGATACATT...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCTTCTGTCACAGGCATaGGACTACTTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHLLSQA*DYFPGQ
Trigger: CTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCACAAGGTCATTGGCATaGGGATCATCATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGTRSLA*GSSSLA
Trigger: TGCTAAAGATGATGATCCCCATGCCAATGACCTTGT...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTACCCCAACAAGGTCATTaGCATGGGGATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVPQQGH*HGDHHL
Trigger: AAGATGATGATCCCCATGCCAATGACCTTGTTGGGG...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCCGAGCTATCCGTGGTaGGACATCATCAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHPSYPW*DIIKGD
Trigger: ATCTCCCTTGATGATGTCCCACCACGGATAGCTCGG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTAAGGCCAAGGCCGCATaGTGGCTCTCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTKAKAA*WLSSTA
Trigger: TGCTGTGCTGGAGAGCCACCATGCGGCCTTGGCCTT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTAAAGCTTCAGGGCTCTaGGTGGTGTCTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIKASGL*VVSPTI
Trigger: AATAGTGGGAGACACCACCCAGAGCCCTGAAGCTTT...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAATGGCATTGGATaGTGGCTGCAGAAGGTTACT +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPSNGIG*WLQKVT
Trigger: AGTAACCTTCTGCAGCCACCATCCAATGCCATTACT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAGCTGTTTCAGAGCCCTaGGTTCTATACAGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVAVSEP*VLYSRS
Trigger: GCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGC...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGGTTTGCGGAGACCCTaGCGCGGTGCAGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPGLRRP*RGAAGS
Trigger: GGAGCCGGCTGCACCGCGCCAGGGTCTCCGCAAACC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557957.5
3UTR CAA 72 bp GCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATaGGACACATCAGCACATTTAATCAGCATTCGTTTG +
Preference number: 4 (lower is better)
Translates to: AHSMQYCRGRQG*DTSAHLISIRL
Trigger: CAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp CGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCACAGGCAAGGACAGCCTaGGCCTCCTTGGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: RKPSDIKPPTRSLAWGSSQARTA*ASLVTV
Trigger: TACAGTTACCAAGGAGGCTCAGGCTGTCCTTGCCTG...TGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTTTCCTCCCTGTCCAATaGCAGGTATTATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPFLPVQ*QVLSSH
Trigger: ATGTGAAGATAATACCTGTCATTGGACAGGGAGGAA...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCAGAATGGTGGCTGCGATaGGTGCAGCGACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: RKPSDIKPPTRSLAWGSSEWWLR*VQRPHQ
Trigger: TTGATGAGGTCGCTGCACTCATCGCAGCCACCATTC...TGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCTGCAGAAGGTTACTaGTGTCCCCGTGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAAAEGY*CPRGLS
Trigger: TGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGC...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTTGTTTTACCAGAAACTaGGGCAAACCGTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGICFTRN*GKPWSS
Trigger: TGAGGACCACGGTTTGCCTCAGTTTCTGGTAAAACA...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTAGTAGTGTTCCCAAGTaGGCGATTGCACCTTCTATG +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGISSVPK*AIAPSM
Trigger: CATAGAAGGTGCAATCGCTCACTTGGGAACACTACT...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCGCTCGGAAATGTGGATaGTCGGGGCACAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVARKCG*SGHSPC
Trigger: GCATGGGCTGTGCCCCGAGCATCCACATTTCCGAGC...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CATGTCGATAATCCCCTGGCGCAGTGTCCGATAATCATTCCTCTCCATGTTTTTCTACCTTCTTGCCGCTaGCGTCGCGAAGCTCCGACT +
Preference number: 4 (lower is better)
Translates to: HVDNPLAQCPIIIPLHVFLPSCR*RREAPT
Trigger: AGTCGGAGCTTCGCGACGGCAGCGGCAAGAAGGTAG...AAAAACATGGAGAGGAATGATTATCGGACACTGCGCCAGGGGATTATCGACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCACCTGCACAGTGCCTCTaGATCCAGCTGTCGAGGATT +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAPAQCL*IQLSRI
Trigger: AATCCTCGACAGCTGGATGCAGAGGCACTGTGCAGG...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGGCTGGAAACTTCAGTTaGACGGGAGGCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVAGNFS*TGGNSF
Trigger: AAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGC...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCAGGTGGCTGCGATGAGTaGAGCGACCTCATCAATTGG +
Preference number: 4 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQAGGCDE*SDLINW
Trigger: CCAATTGATGAGGTCGCTGCACTCATCGCAGCCACC...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCATCATGAATGGTGGCTaGGATGAGTGCAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSIMNGG*DECSDL
Trigger: GAGGTCGCTGCACTCATCGCAGCCACCATTCATGAT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGTGCAGCCCACTCGATaGAGTACTGCAGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLVQPTR*STAGVG
Trigger: GCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCAC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACGAGTTACCTGTGAAGTaGATTAGGCGGCTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHELPVK*IRRLEL
Trigger: CAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTC...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GGATTGGACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCAGGCGCTCGGAAATGTaGATGCTCGGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: GLDTSAHLISIRLIRVRFRRSEM*MLGAQP
Trigger: GGGCTGTGCCCCGAGCATCCACATTTCCGAGCGCCT...GAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGAGTGTCGTCTCTGGCTaGAAACTTCAGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVSVVSG*KLQLHG
Trigger: CCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACT...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGAAGAGTGTCGTCTCTaGCTGGAAACTTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIEECRL*LETSVA
Trigger: TGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTC...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp ATGGCCCGAGCTATCCGTGGTGGGACATCATCAAGGGAGATGGGAGTGATTATAAATGTATCCGGGCCATaGAAGAGTGTCGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: MARAIRGGTSSREMGVIINVSGP*KSVVSG
Trigger: GCCAGAGACGACACTCTTCCATGGCCCGGATACATT...TATAATCACTCCCATCTCCCTTGATGATGTCCCACCACGGATAGCTCGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGAATGTATCCGGGCCATaGAAGAGTGTCGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLNVSGP*KSVVSG
Trigger: GCCAGAGACGACACTCTTCCATGGCCCGGATACATT...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGCCGAGCTATCCGTGGTaGGACATCATCAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLPSYPW*DIIKGD
Trigger: ATCTCCCTTGATGATGTCCCACCACGGATAGCTCGG...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGATTCCTCATTTTCCATaGCCCGAGCTATCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVIPHFP*PELSVV
Trigger: CACCACGGATAGCTCGGGCCATGGAAAATGAGGAAT...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACATTCCTCATTTTCCATaGCCCGAGCTATCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHIPHFP*PELSVV
Trigger: CACCACGGATAGCTCGGGCCATGGAAAATGAGGAAT...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACATCAAAGGCCTATTGTaGGTGGCAGCCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHIKGLL*VAASSS
Trigger: TGAACTGGAGGCTGCCACCCACAATAGGCCTTTGAT...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACATGTCATTGTACAAAATaGCCAGCTCACTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTCHCTK*PAHFQH
Trigger: ATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGCCAAGGCCGCATGGTaGCTCTCCAGCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLAKAAW*LSSTAV
Trigger: CACTGCTGTGCTGGAGAGCCACCATGCGGCCTTGGC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGCCAAGGCCGCATGGTaGCTCTCCAGCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVAKAAW*LSSTAV
Trigger: CACTGCTGTGCTGGAGAGCCACCATGCGGCCTTGGC...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCATAGTGTTTATCACTTCCTGGAAGGCCAAGGCCGCATaGTGGCTCTCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LIRVRFSGVLSIVFITSWKAKAA*WLSSTA
Trigger: TGCTGTGCTGGAGAGCCACCATGCGGCCTTGGCCTT...CCAGGAAGTGATAAACACTATGCTTAGGACTCCAGAGAACCGGACCCTAATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTATTTATCATCTCCAGTaGTCAGCTGGAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIIYHLQ*SAGRPR
Trigger: CCTTGGCCTTCCAGCTGACCACTGGAGATGATAAAT...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTCTAGTTTTACCTTaGGGAGTTACCTGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPSLVLP*GVTCEV
Trigger: CACTTCACAGGTAACTCCCCAAGGTAAAACTAGACT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAAGACGAGCTTCTGCTTaGGTGATACCCGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RWSEVPQLHFVQSFPVFKRRASA*VIPGWA
Trigger: AGCCCAGCCGGGTATCACCCAAGCAGAAGCTCGTCT...TTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR TCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGAGTTTCAGTTGTaGTCGCACCTCTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSPEFQL*SHLSKL
Trigger: GAGTTTGGAGAGGTGCGATCACAACTGAAACTCAGG...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCACCTGAGTTTCAGTTGTaGTCGCACCTCTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: VMECIRAMEECRLWLETSPEFQL*SHLSKL
Trigger: GAGTTTGGAGAGGTGCGATCACAACTGAAACTCAGG...TGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGCTCGGAAATGTGGATaGTCGGGGCACAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLARKCG*SGHSPC
Trigger: GCATGGGCTGTGCCCCGAGCATCCACATTTCCGAGC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR GCA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGCTCGGAAATGTGGATaGTCGGGGCACAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVARKCG*SGHSPC
Trigger: GCATGGGCTGTGCCCCGAGCATCCACATTTCCGAGC...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTCTTTTTCACATGCCCTaGAGAATCCATTACATTGGT +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPLFHMP*RIHYIG
Trigger: ACCAATGTAATGGATTCTGCAGGGCATGTGAAAAAG...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTGGTGGCTGCGATGAGTaGAGCGACCTCATCAATTGG +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTGGCDE*SDLINW
Trigger: CCAATTGATGAGGTCGCTGCACTCATCGCAGCCACC...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTTTGACATGCTCAAAGTaGTTTGTCATTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPLTCSK*FVISVA
Trigger: AGCCACAGAAATGACAAAGCACTTTGAGCATGTCAA...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCCACTCGATGCAGTACTaGAGGGGTCGGCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVHSMQY*RGRQGL
Trigger: CAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTG...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GCGATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCCACTCGATGCAGTACTaGAGGGGTCGGCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: AMSAATSSIGSKVSFILSHSMQY*RGRQGL
Trigger: CAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTG...GGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTATTTGGGATTTGGGGATaGTGCAGGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVFGIWG*CRYFCQ
Trigger: TTGACAGAAATACCTGCAGCATCCCCAAATCCCAAA...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTCCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCAGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: RKPSDIKPPTRSLAWGSSDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...TGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGCTCATGGGGCCAAACTaGACATCAGCTACTGCTACT +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVLMGPN*TSATAT
Trigger: AGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAG...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR CCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACAAGGCGCTCGGAAATGTaGATGCTCGGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTRRSEM*MLGAQP
Trigger: GGGCTGTGCCCCGAGCATCCACATTTCCGAGCGCCT...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp CAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCTGTCACAGGCATaGGACTACTTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QLSWNVSGPWKSVVSGWKLLSQA*DYFPGQ
Trigger: CTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAG...TTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCACCGAGCTATCCGTGGTaGGACATCATCAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAPSYPW*DIIKGD
Trigger: ATCTCCCTTGATGATGTCCCACCACGGATAGCTCGG...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGATTCCTCATTTTCCATaGCCCGAGCTATCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLIPHFP*PELSVV
Trigger: CACCACGGATAGCTCGGGCCATGGAAAATGAGGAAT...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCTAAGGCCTATTGTGGGTaGCAGCCTCCAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: CRLWLETSVAREATALTSKAYCG*QPPVQK
Trigger: TTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTT...AGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GAAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACAATTGTGGTAGGGATTaGAGGAATGATAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: EMRAAHSMQYCRGRQGLDNCGRD*RNDNWL
Trigger: AAGCCAATTATCATTCCTCCAATCCCTACCACAATT...GTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp AATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACTACACAGGAAGGAGTTaGTTCTCCCAGGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: NVSGPWKSVVSGWKLQLHYTGRS*FSQGDP
Trigger: TGGATCACCCTGGGAGAACCAACTCCTTCCTGTGTA...GTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGTACACAGGAAGGAGTTaGTTCTCCCAGGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLYTGRS*FSQGDP
Trigger: TGGATCACCCTGGGAGAACCAACTCCTTCCTGTGTA...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGAAGGCCAAGGCCGCATaGTGGCTCTCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLKAKAA*WLSSTA
Trigger: TGCTGTGCTGGAGAGCCACCATGCGGCCTTGGCCTT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAAAGGCCAAGGCCGCATaGTGGCTCTCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: DTSAHLISIRLIRVRFSGKAKAA*WLSSTA
Trigger: TGCTGTGCTGGAGAGCCACCATGCGGCCTTGGCCTT...TCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAAAGCTTCAGGGCTCTaGGTGGTGTCTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: SMQYCRGRQGLDTSAHLIKASGL*VVSPTI
Trigger: AATAGTGGGAGACACCACCCAGAGCCCTGAAGCTTT...GATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACGACATGCTCTGTCACTaGCAGGAAGTCCATCAATAC +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHDMLCH*QEVHQY
Trigger: GTATTGATGGACTTCCTGCCAGTGACAGAGCATGTC...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACGCTGTTTCAGAGCCCTaGGTTCTATACAGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHAVSEP*VLYSRS
Trigger: GCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGC...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCACCTGAGTTTCAGTTGTaGTCGCACCTCTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQAPEFQL*SHLSKL
Trigger: GAGTTTGGAGAGGTGCGATCACAACTGAAACTCAGG...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTGRQQL*RLVSLF
Trigger: GAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCC...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CGGGAGGCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: REATALTSSEPFLLSLCLGRQQL*RLVSLF
Trigger: GAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCC...CAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS-3UTR TCA 90 bp AGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RWSEVPQLHFVQSFPVFKGRQQL*RLVSLF
Trigger: GAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCC...TTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTCAAGGGAGATGGGAGTaGTTATATTGCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIQGRWE*LYCLKP
Trigger: TGGTTTCAAGCAATATAATCACTCCCATCTCCCTTG...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTCAAGGGAGATGGGAGTaGTTATATTGCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPQGRWE*LYCLKP
Trigger: TGGTTTCAAGCAATATAATCACTCCCATCTCCCTTG...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCAGTAGTGTTCCCAAGTaGGCGATTGCACCTTCTATG +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSSSVPK*AIAPSM
Trigger: CATAGAAGGTGCAATCGCTCACTTGGGAACACTACT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTTGCTTATTCAAGGTGTaGAGATACAGAACCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPCLFKV*RYRTSL
Trigger: TAAAGAGGTTCTGTATCTTCACACCTTGAATAAGCA...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCTGCAGGATTTGCATACTaGGTTTCAGTTGTGATCGCA +
Preference number: 4 (lower is better)
Translates to: CRLWLETSVAREATALTSAGFAY*VSVVIA
Trigger: TGCGATCACAACTGAAACTCAGTATGCAAATCCTGC...AGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478717.5
CDS-3UTR GCA 90 bp GGATTGGACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCCTACTGCTACCTTCTTaGCGCTGCCGTCGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GLDTSAHLISIRLIRVRFLLLPS*RCRREA
Trigger: AGCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAG...GAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CGGGAGGCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCTCATGGGGCCAAACTaGACATCAGCTACTGCTACC +
Preference number: 4 (lower is better)
Translates to: REATALTSSEPFLLSLCLLMGPN*TSATAT
Trigger: GGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAG...CAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCTCCCTGCTTTTTCACATaGCCTGCAGAATCCATTACA +
Preference number: 4 (lower is better)
Translates to: CRLWLETSVAREATALTSPCFFT*PAESIT
Trigger: TGTAATGGATTCTGCAGGGCATGTGAAAAAGCAGGG...AGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ATAACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGATAGACCTGCACAGTaGCTCTGCATCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: ITQWFLEFPAHGLGLLSQDRPAQ*LCIQLS
Trigger: CGACAGCTGGATGCAGAGGCACTGTGCAGGTCTATC...CTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCAGCTGGAAACTTCAGTTaGACGGGAGGCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQAAGNFS*TGGNSF
Trigger: AAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGC...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCTGGAAACTTCAGTTaGACGGGAGGCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAAGNFS*TGGNSF
Trigger: AAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGC...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTTTCTTCCGAAATGCGTaGAGCCCACTCGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFFFRNA*SPLDAV
Trigger: TACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAA...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGAATATTCTTCCGAAATaGGTGCAGCCCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVNILPK*VQPTRC
Trigger: GCATCGAGTGGGCTGCACGCATTTCGGAAGAATATT...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTTTTGGGATTTGGGGATaGTGCAGGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIFGIWG*CRYFCQ
Trigger: TTGACAGAAATACCTGCAGCATCCCCAAATCCCAAA...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCATTGGATGGTGGCTaGAGAAGGTTACTGATGTCC +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAALDGG*RRLLMS
Trigger: GGACATCAGTAACCTTCTGCAGCCACCATCCAATGC...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGACCCGGCTGGGCTTTCTaGTATGTTCTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: DTSAHLISIRLIRVRFSGPGWAF*YVLLRL
Trigger: GAGCCTCAGGAGAACATAGCAGAAAGCCCAGCCGGG...TCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR GCA 90 bp CGGGAGGCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGTCTGCACAGTGCCTCTaGATCCAGCTGTCGAGGATT +
Preference number: 4 (lower is better)
Translates to: REATALTSSEPFLLSLCLSAQCL*IQLSRI
Trigger: AATCCTCGACAGCTGGATGCAGAGGCACTGTGCAGA...CAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR GCA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCCATACCTCTGCACAGTaGCTCTGCATCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVHTSAQ*LCIQLS
Trigger: CGACAGCTGGATGCAGAGGCACTGTGCAGAGGTATG...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR CCA 90 bp TCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCTCCGTTTTTCTTTTTaGCATAGTAAATTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SGPWKSVVSGWKLQLHGRLRFSF*HSKFLA
Trigger: GGCAAGGAATTTACTATGCCAAAAAGAAAAACGGAG...CCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTAATGTATCCGGGCCATaGAAGAGTGTCGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTNVSGP*KSVVSG
Trigger: GCCAGAGACGACACTCTTCCATGGCCCGGATACATT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGCCCCAACAAGGTCATTaGCATGGGGATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLPQQGH*HGDHHL
Trigger: AAGATGATGATCCCCATGCCAATGACCTTGTTGGGG...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp ATGGCCCGAGCTATCCGTGGTGGGACATCATCAAGGGAGATGGGAGTGATTATACCCCAACAAGGTCATTaGCATGGGGATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: MARAIRGGTSSREMGVIIPQQGH*HGDHHL
Trigger: AAGATGATGATCCCCATGCCAATGACCTTGTTGGGG...TATAATCACTCCCATCTCCCTTGATGATGTCCCACCACGGATAGCTCGGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGGCCCGAGCTATCCGTaGTGGGACATCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLGPSYP*WDIIKG
Trigger: TCCCTTGATGATGTCCCACCACGGATAGCTCGGGCC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCAATTCCTCATTTTCCATaGCCCGAGCTATCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RKPSDIKPPTRSLAWGSSIPHFP*PELSVV
Trigger: CACCACGGATAGCTCGGGCCATGGAAAATGAGGAAT...TGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTGTCATTGTACAAAATaGCCAGCTCACTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPCHCTK*PAHFQH
Trigger: ATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCATTTATCATCTCCAGTaGTCAGCTGGAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSIYHLQ*SAGRPR
Trigger: CCTTGGCCTTCCAGCTGACCACTGGAGATGATAAAT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTAAAGCTTCAGGGCTCTaGGTGGTGTCTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: QYCRGRQGLDTSAHLISIKASGL*VVSPTI
Trigger: AATAGTGGGAGACACCACCCAGAGCCCTGAAGCTTT...AATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACAATGGCATTGGATGGTaGCTGCAGAAGGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHNGIGW*LQKVTD
Trigger: ATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCGCTGTTTCAGAGCCCTaGGTTCTATACAGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSAVSEP*VLYSRS
Trigger: GCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGC...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR CAA 72 bp ATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTaGCAGGGGCACTCCAGACCTTGTGTTTTACCAGAA +
Preference number: 4 (lower is better)
Translates to: MLCHWQEVHQYP*QGHSRPCVLPE
Trigger: TTCTGGTAAAACACAAGGTCTGGAGTGCCCCTGCAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCAGGCAAGGACAGCCTaGGCCTCCTTGGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLQARTA*ASLVTV
Trigger: TACAGTTACCAAGGAGGCTCAGGCTGTCCTTGCCTG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTCAGGCAAGGACAGCCTaGGCCTCCTTGGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVQARTA*ASLVTV
Trigger: TACAGTTACCAAGGAGGCTCAGGCTGTCCTTGCCTG...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAATGATGATAATGTCATaGTGTTTGTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVMMIMS*CLSRKQ
Trigger: CTGTTTCCTGGACAAACATCATGACATTATCATCAT...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGCATTGTAGCAGGCCATaGTGTTGGGGTTTTCTACAT +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLHCSRP*CWGFLH
Trigger: ATGTAGAAAACCCCAACATCATGGCCTGCTACAATG...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCCATTGTAGCAGGCCATaGTGTTGGGGTTTTCTACAT +
Preference number: 4 (lower is better)
Translates to: SMQYCRGRQGLDTSAHLIHCSRP*CWGFLH
Trigger: ATGTAGAAAACCCCAACATCATGGCCTGCTACAATG...GATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTTCCTCCCTGTCCAATaGCAGGTATTATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVFLPVQ*QVLSSH
Trigger: ATGTGAAGATAATACCTGTCATTGGACAGGGAGGAA...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp TGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCTCAAGGGAGATGGGAGTaGTTATATTGCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: CRLWLETSVAREATALTSQGRWE*LYCLKP
Trigger: TGGTTTCAAGCAATATAATCACTCCCATCTCCCTTG...AGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGCTGCAGAAGGTTACTaGTGTCCCCGTGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLAAEGY*CPRGLS
Trigger: TGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TCGCACCTCTCCAAACTCCAGCTGGAGCAGTTCATTGTAGCAGGCCATGATGTTGCCTGTCTGATTATCTaGGTTTCAGTTGTGATCGCA +
Preference number: 4 (lower is better)
Translates to: SHLSKLQLEQFIVAGHDVACLII*VSVVIA
Trigger: TGCGATCACAACTGAAACTCAGATAATCAGACAGGC...AACATCATGGCCTGCTACAATGAACTGCTCCAGCTGGAGTTTGGAGAGGTGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR GCA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCTACCTTCTTGCCGCTaGCGTCGCGAAGCTCCGACT +
Preference number: 4 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSLPSCR*RREAPT
Trigger: AGTCGGAGCTTCGCGACGGCAGCGGCAAGAAGGTAG...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACACTACTGCTACCTTCTTaGCGCTGCCGTCGCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTLLLPS*RCRREA
Trigger: AGCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAG...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCCTGCTTTTTCACATaGCCTGCAGAATCCATTACA +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSPCFFT*PAESIT
Trigger: TGTAATGGATTCTGCAGGGCATGTGAAAAAGCAGGG...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCCTGCACAGTGCCTCTaGATCCAGCTGTCGAGGATT +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLPAQCL*IQLSRI
Trigger: AATCCTCGACAGCTGGATGCAGAGGCACTGTGCAGG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGATAGACCTGCACAGTaGCTCTGCATCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLDRPAQ*LCIQLS
Trigger: CGACAGCTGGATGCAGAGGCACTGTGCAGGTCTATC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GGATTGGACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCGATAGACCTGCACAGTaGCTCTGCATCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GLDTSAHLISIRLIRVRFDRPAQ*LCIQLS
Trigger: CGACAGCTGGATGCAGAGGCACTGTGCAGGTCTATC...GAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTTTCAAATGCAGGATTTaGATACTGTATAAAACGGTC +
Preference number: 4 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPFKCRI*ILYKTV
Trigger: GACCGTTTTATACAGTATGCAAATCCTGCATTTGAA...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCAGGTGGCTGCGATGAGTaGAGCGACCTCATCAATTGG +
Preference number: 4 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAGGCDE*SDLINW
Trigger: CCAATTGATGAGGTCGCTGCACTCATCGCAGCCACC...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTTTCTTCCGAAATGCGTaGAGCCCACTCGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTFFRNA*SPLDAV
Trigger: TACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAA...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAAATATTCTTCCGAAATaGGTGCAGCCCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEANILPK*VQPTRC
Trigger: GCATCGAGTGGGCTGCACGCATTTCGGAAGAATATT...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCAAATATTCTTCCGAAATaGGTGCAGCCCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQANILPK*VQPTRC
Trigger: GCATCGAGTGGGCTGCACGCATTTCGGAAGAATATT...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTAATATTCTTCCGAAATaGGTGCAGCCCACTCGATGC +
Preference number: 4 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFNILPK*VQPTRC
Trigger: GCATCGAGTGGGCTGCACGCATTTCGGAAGAATATT...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TGTCATTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGCCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: CHCTKWPAHFQHYTGRSWPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...CCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ATAACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: ITQWFLEFPAHGLGLLSQDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...CTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAACTGAGAGAATTGTTTaGAATAGACATGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVTERIV*NRHALS
Trigger: TGACAGAGCATGTCTATTGCAAACAATTCTCTCAGT...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp ACATATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAGCAGAGGAAGGGATGTaGACAGCGCCAAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: TYSFPDSLRKPSDIKPPTAEEGM*TAPNQE
Trigger: CTCCTGGTTTGGCGCTGTGCACATCCCTTCCTCTGC...TGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR CCA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCAGTGTCGTCTCTGGCTaGAAACTTCAGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSSVVSG*KLQLHG
Trigger: CCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACT...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATGCGCCTCAATTGTCATaGAATGTATCCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHAPQLS*NVSGPW
Trigger: CCATGGCCCGGATACATTCCATGACAATTGAGGCGC...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCTCGCGCCTCAATTGTCATaGAATGTATCCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LYKMASSLPALHRKELVLAPQLS*NVSGPW
Trigger: CCATGGCCCGGATACATTCCATGACAATTGAGGCGC...GAGAACCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp ATAACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGCTTCTGTCACAGGCATaGGACTACTTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ITQWFLEFPAHGLGLLSQLLSQA*DYFPGQ
Trigger: CTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAG...CTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATCTTCTGTCACAGGCATaGGACTACTTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHLLSQA*DYFPGQ
Trigger: CTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAG...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACACAAGGTCATTGGCATaGGGATCATCATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHTRSLA*GSSSLA
Trigger: TGCTAAAGATGATGATCCCCATGCCAATGACCTTGT...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGACAAGGTCATTGGCATaGGGATCATCATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVTRSLA*GSSSLA
Trigger: TGCTAAAGATGATGATCCCCATGCCAATGACCTTGT...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCTCCCGAGCTATCCGTGGTaGGACATCATCAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LYKMASSLPALHRKELVLPSYPW*DIIKGD
Trigger: ATCTCCCTTGATGATGTCCCACCACGGATAGCTCGG...GAGAACCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACTGTCATTGTACAAAATaGCCAGCTCACTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHCHCTK*PAHFQH
Trigger: ATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCCACTATTCAGGAGGTaGTCGGAGGTTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLPLFRR*SEVPQL
Trigger: AAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: DTSAHLISIRLIRVRFSGRTKEL*LPSGIP
Trigger: TGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCT...TCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGAATGGCATTGGATGGTaGCTGCAGAAGGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLNGIGW*LQKVTD
Trigger: ATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGAGTAATGGCATTGGATaGTGGCTGCAGAAGGTTACT +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVSNGIG*WLQKVT
Trigger: AGTAACCTTCTGCAGCCACCATCCAATGCCATTACT...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TGTCATTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTGGGTGATACCCGGCTaGGCTTTCTGCTATGTTCTC +
Preference number: 4 (lower is better)
Translates to: CHCTKWPAHFQHYTGRSWWVIPG*AFCYVL
Trigger: GAGAACATAGCAGAAAGCCCAGCCGGGTATCACCCA...CCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR CCA 90 bp TCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCATCTTTAGCAACCCACGAAGAATTCTaGAGCCCAGACGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SDIKPPTRSLAWGSSSLATHEEF*SPDELL
Trigger: CAGAAGCTCGTCTGGGCTCCAGAATTCTTCGTGGGT...TGCTAAAGATGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485596.5
3UTR CAA 72 bp TGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: WLETSVAREATA*TSSEPFLLSLC
Trigger: ACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CAA 72 bp TCTGTCACAGGCATGGGACTACTTTCCTGGGCAGCATaGATAATATTGATTACCTTGGTGATGGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: SVTGMGLLSWAA*IILITLVMGAS
Trigger: TGAGGCGCCCATCACCAAGGTAATCAATATTATCAATGCTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp GTTTCAGTTGTGATCGCACCTCTCCAAACTCCAGCTGGAGCAGTTCATTGTAGCCATTGTAGCAGGCCATaGTGTTGGGGTTTTCTACAT +
Preference number: 4 (lower is better)
Translates to: VSVVIAPLQTPAGAVHCSHCSRP*CWGFLH
Trigger: ATGTAGAAAACCCCAACATCATGGCCTGCTACAATG...GCTACAATGAACTGCTCCAGCTGGAGTTTGGAGAGGTGCGATCACAACTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR TCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTCATTGTAGCAGGCCATaGTGTTGGGGTTTTCTACAT +
Preference number: 4 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFHCSRP*CWGFLH
Trigger: ATGTAGAAAACCCCAACATCATGGCCTGCTACAATG...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATCCTGAGTTTCAGTTGTaGTCGCACCTCTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHPEFQL*SHLSKL
Trigger: GAGTTTGGAGAGGTGCGATCACAACTGAAACTCAGG...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTTGTTTTACCAGAAACTaGGGCAAACCGTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTCFTRN*GKPWSS
Trigger: TGAGGACCACGGTTTGCCTCAGTTTCTGGTAAAACA...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCACCCTGCTTTTTCACATaGCCTGCAGAATCCATTACA +
Preference number: 4 (lower is better)
Translates to: RKPSDIKPPTRSLAWGSSPCFFT*PAESIT
Trigger: TGTAATGGATTCTGCAGGGCATGTGAAAAAGCAGGG...TGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACACCTGCACAGTGCCTCTaGATCCAGCTGTCGAGGATT +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTPAQCL*IQLSRI
Trigger: AATCCTCGACAGCTGGATGCAGAGGCACTGTGCAGG...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp ACATATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAGATAGACCTGCACAGTaGCTCTGCATCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: TYSFPDSLRKPSDIKPPTDRPAQ*LCIQLS
Trigger: CGACAGCTGGATGCAGAGGCACTGTGCAGGTCTATC...TGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCAATCATGAATGGTGGCTaGGATGAGTGCAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAIMNGG*DECSDL
Trigger: GAGGTCGCTGCACTCATCGCAGCCACCATTCATGAT...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGATCATGAATGGTGGCTaGGATGAGTGCAGCGACCTC +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLIMNGG*DECSDL
Trigger: GAGGTCGCTGCACTCATCGCAGCCACCATTCATGAT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTACACTCGATGCAGTACTaGAGGGGTCGGCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILHSMQY*RGRQGL
Trigger: CAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTG...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TGTCATTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCTTCCGAAATGCGTaGAGCCCACTCGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: CHCTKWPAHFQHYTGRSWFFRNA*SPLDAV
Trigger: TACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAA...CCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTCCAAGGAGCTCTGGCTaGCCTCAGGAATTCCAAATG +
Preference number: 4 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVPRSSG*PQEFQM
Trigger: CATTTGGAATTCCTGAGGGCAGCCAGAGCTCCTTGG...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTTCAAATGCAGGATTTaGATACGTGGCAGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVFKCRI*IRGSCE
Trigger: TTCACAACTGCCACGTATGCAAATCCTGCATTTGAA...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR CCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTCTTGATGAAATCTCATaGGGCCAAACTGCACATCAG +
Preference number: 4 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFLDEIS*GQTAHQ
Trigger: CTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAG...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCACTTGATGAAATCTCATaGGGCCAAACTGCACATCAG +
Preference number: 4 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQALDEIS*GQTAHQ
Trigger: CTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAG...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp AAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCAGTGTCGTCTCTGGCTaGAAACTTCAGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: KSKAYCGWQPPVQKYQSPSVVSG*KLQLHG
Trigger: CCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACT...GGGACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTGAAGAGTGTCGTCTCTaGCTGGAAACTTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTEECRL*LETSVA
Trigger: TGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTC...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGCGCCTCAATTGTCATaGAATGTATCCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLAPQLS*NVSGPW
Trigger: CCATGGCCCGGATACATTCCATGACAATTGAGGCGC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCTTCTGTCACAGGCATaGGACTACTTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLLLSQA*DYFPGQ
Trigger: CTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTCTTCTGTCACAGGCATaGGACTACTTTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVLLSQA*DYFPGQ
Trigger: CTGCCCAGGAAAGTAGTCCCATGCCTGTGACAGAAG...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGACAAGGTCATTGGCATaGGGATCATCATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLTRSLA*GSSSLA
Trigger: TGCTAAAGATGATGATCCCCATGCCAATGACCTTGT...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGACAAGGTCATTGGCATaGGGATCATCATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVTRSLA*GSSSLA
Trigger: TGCTAAAGATGATGATCCCCATGCCAATGACCTTGT...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTCCCCAACAAGGTCATTaGCATGGGGATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTPQQGH*HGDHHL
Trigger: AAGATGATGATCCCCATGCCAATGACCTTGTTGGGG...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAGGCCCGAGCTATCCGTaGTGGGACATCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILGPSYP*WDIIKG
Trigger: TCCCTTGATGATGTCCCACCACGGATAGCTCGGGCC...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GCATTGATAATATTGATTACCTTGGTGATGGGCGCCTCAATTGTCATGGAATGTGGCCCGAGCTATCCGTaGTGGGACATCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: ALIILITLVMGASIVMECGPSYP*WDIIKG
Trigger: TCCCTTGATGATGTCCCACCACGGATAGCTCGGGCC...ACATTCCATGACAATTGAGGCGCCCATCACCAAGGTAATCAATATTATCAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGGCCCGAGCTATCCGTaGTGGGACATCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPGPSYP*WDIIKG
Trigger: TCCCTTGATGATGTCCCACCACGGATAGCTCGGGCC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTAAGGCCTATTGTGGGTaGCAGCCTCCAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTKAYCG*QPPVQK
Trigger: TTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CATGTCGATAATCCCCTGGCGCAGTGTCCGATAATCATTCCTCTCCATGTTTTTATCAAAGGCCTATTGTaGGTGGCAGCCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: HVDNPLAQCPIIIPLHVFIKGLL*VAASSS
Trigger: TGAACTGGAGGCTGCCACCCACAATAGGCCTTTGAT...AAAAACATGGAGAGGAATGATTATCGGACACTGCGCCAGGGGATTATCGACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCATAGTGTTTATCACTTCCTGGATCAAAGGCCTATTGTaGGTGGCAGCCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LIRVRFSGVLSIVFITSWIKGLL*VAASSS
Trigger: TGAACTGGAGGCTGCCACCCACAATAGGCCTTTGAT...CCAGGAAGTGATAAACACTATGCTTAGGACTCCAGAGAACCGGACCCTAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATTACACAGGAAGGAGTTaGTTCTCCCAGGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHYTGRS*FSQGDP
Trigger: TGGATCACCCTGGGAGAACCAACTCCTTCCTGTGTA...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCTACACAGGAAGGAGTTaGTTCTCCCAGGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSYTGRS*FSQGDP
Trigger: TGGATCACCCTGGGAGAACCAACTCCTTCCTGTGTA...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCATCTTTAGCACCAAACTGTGGTGAATATAACTCAGTGGTTCTTAGAATTTCCGCCAAGGCCGCATGGTaGCTCTCCAGCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSLAPNCGEYNSVVLRISAKAAW*LSSTAV
Trigger: CACTGCTGTGCTGGAGAGCCACCATGCGGCCTTGGC...GGAAATTCTAAGAACCACTGAGTTATATTCACCACAGTTTGGTGCTAAAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACACCACTATTCAGGAGGTaGTCGGAGGTTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTPLFRR*SEVPQL
Trigger: AAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGG...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATTTACTGATGTCCCCGTaGGCTTTCACAGGCTATGCA +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHLLMSP*AFTGYA
Trigger: TGCATAGCCTGTGAAAGCCCACGGGGACATCAGTAA...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTGACATGCTCTGTCACTaGCAGGAAGTCCATCAATAC +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTDMLCH*QEVHQY
Trigger: GTATTGATGGACTTCCTGCCAGTGACAGAGCATGTC...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCACAGGCAAGGACAGCCTaGGCCTCCTTGGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPQARTA*ASLVTV
Trigger: TACAGTTACCAAGGAGGCTCAGGCTGTCCTTGCCTG...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGATGATGATAATGTCATaGTGTTTGTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: ASIVMECIRAMEECRLWLMMIMS*CLSRKQ
Trigger: CTGTTTCCTGGACAAACATCATGACATTATCATCAT...CAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCTGTTTTCTAATGCAGTaGATACTGAGTTACAAGCCC +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSCFLMQ*ILSYKP
Trigger: GGGCTTGTAACTCAGTATTCACTGCATTAGAAAACA...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGAATGGTGGCTGCGATaGGTGCAGCGACCTCATCAA +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPEWWLR*VQRPHQ
Trigger: TTGATGAGGTCGCTGCACTCATCGCAGCCACCATTC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTCTCAGGAATTCCAAATaGCCGAAGGAACAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTLRNSK*PKEQSF
Trigger: GAAGCTTTGTTCCTTCGGTCATTTGGAATTCCTGAG...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTACTGAGTTTCAGTTGTaGTCGCACCTCTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTTEFQL*SHLSKL
Trigger: GAGTTTGGAGAGGTGCGATCACAACTGAAACTCAGT...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478717.5
CDS-3UTR TCA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCTCTGAGTTTCAGTTGTaGTCGCACCTCTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVSEFQL*SHLSKL
Trigger: GAGTTTGGAGAGGTGCGATCACAACTGAAACTCAGA...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR GCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACACTCATGGGGCCAAACTaGACATCAGCTACTGCTACC +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTLMGPN*TSATAT
Trigger: GGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAG...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CATATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAACTCATGGGGCCAAACTaGACATCAGCTACTGCTACC +
Preference number: 4 (lower is better)
Translates to: HIHSLIVFANHQTLSPQQLMGPN*TSATAT
Trigger: GGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAG...TTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGCTTTTTCACATGCCCTaGAGAATCCATTACATTGGT +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVLFHMP*RIHYIG
Trigger: ACCAATGTAATGGATTCTGCAGGGCATGTGAAAAAG...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCATTGGCATGGGGATCATCATCTTTAGCACCAAACTGTGGTGAATATAACTCACCTGCACAGTGCCTCTaGATCCAGCTGTCGAGGATT +
Preference number: 4 (lower is better)
Translates to: SLAWGSSSLAPNCGEYNSPAQCL*IQLSRI
Trigger: AATCCTCGACAGCTGGATGCAGAGGCACTGTGCAGG...TGAGTTATATTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTGGTGGCTGCGATGAGTaGAGCGACCTCATCAATTGG +
Preference number: 4 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSGGCDE*SDLINW
Trigger: CCAATTGATGAGGTCGCTGCACTCATCGCAGCCACC...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGTTGACATGCTCAAAGTaGTTTGTCATTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLLTCSK*FVISVA
Trigger: AGCCACAGAAATGACAAAGCACTTTGAGCATGTCAA...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGTTCTTCCGAAATGCGTaGAGCCCACTCGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLFFRNA*SPLDAV
Trigger: TACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAA...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCATTCTTCCGAAATGCGTaGAGCCCACTCGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAFFRNA*SPLDAV
Trigger: TACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAA...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCAAGTTGTTGTCAAGATaGTGCATTAAATCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YLGELPVKCIRRLELFQSKLLSR*CIKSGR
Trigger: CCTGCCTGATTTAATGCAGCATCTTGACAACAACTT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp AATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACAAGTTGTTGTCAAGATaGTGCATTAAATCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NVSGPWKSVVSGWKLQLHKLLSR*CIKSGR
Trigger: CCTGCCTGATTTAATGCAGCATCTTGACAACAACTT...GTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACACTGAGAGAATTGTTTaGAATAGACATGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHTERIV*NRHALS
Trigger: TGACAGAGCATGTCTATTGCAAACAATTCTCTCAGT...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGGTCCTAACTTTTCTTTaGGAACCAACAAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLVLTFL*EPTRES
Trigger: AGACTCTCTTGTTGGTTCGCAAAGAAAAGTTAGGAC...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCACATTGTTGTTTCAAATaGAGGATTTGCATACGTGGC +
Preference number: 4 (lower is better)
Translates to: VMECIRAMEECRLWLETSHCCFK*RICIRG
Trigger: GCCACGTATGCAAATCCTGCATTTGAAACAACAATG...TGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACTGTCGAGGATTTCTGTaGTCTATGATGATAATGTCA +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHCRGFL*SMMIMS
Trigger: TGACATTATCATCATAGACCACAGAAATCCTCGACA...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCTCCGTTTTTCTTTTTaGCATAGTAAATTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHLRFSF*HSKFLA
Trigger: GGCAAGGAATTTACTATGCCAAAAAGAAAAACGGAG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATGAAGAGTGTCGTCTCTaGCTGGAAACTTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHEECRL*LETSVA
Trigger: TGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTC...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACACCGAGCTATCCGTGGTaGGACATCATCAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTPSYPW*DIIKGD
Trigger: ATCTCCCTTGATGATGTCCCACCACGGATAGCTCGG...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATAAGGCCTATTGTGGGTaGCAGCCTCCAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHKAYCG*QPPVQK
Trigger: TTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTT...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TGTCATTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGAAGGCCTATTGTGGGTaGCAGCCTCCAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: CHCTKWPAHFQHYTGRSWKAYCG*QPPVQK
Trigger: TTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTT...CCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp CAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAAAAGAGATTTGGGATTTaGGGATGCTGCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: QLSWNVSGPWKSVVSGWKKRFGI*GCCRYF
Trigger: GAAATACCTGCAGCATCCCCAAATCCCAAATCTCTT...TTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTACCACTATTCAGGAGGTaGTCGGAGGTTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILPLFRR*SEVPQL
Trigger: AAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGG...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGAAAGCTTCAGGGCTCTaGGTGGTGTCTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLKASGL*VVSPTI
Trigger: AATAGTGGGAGACACCACCCAGAGCCCTGAAGCTTT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPRTKEL*LPSGIP
Trigger: TGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCT...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCTCTTTATAAATTTCTaGCATCAAAGATTCCCACCG +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHLFINF*HQRFPP
Trigger: CGGTGGGAATCTTTGATGCCAGAAATTTATAAAGAG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGATGATGATAATGTCATaGTGTTTGTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVMMIMS*CLSRKQ
Trigger: CTGTTTCCTGGACAAACATCATGACATTATCATCAT...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTCATTGTAGCAGGCCATaGTGTTGGGGTTTTCTACAT +
Preference number: 4 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTHCSRP*CWGFLH
Trigger: ATGTAGAAAACCCCAACATCATGGCCTGCTACAATG...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTTGTTTTCTAATGCAGTaGATACTGAGTTACAAGCCC +
Preference number: 4 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFCFLMQ*ILSYKP
Trigger: GGGCTTGTAACTCAGTATTCACTGCATTAGAAAACA...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR TCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCATGTTTTCTAATGCAGTaGATACTGAGTTACAAGCCC +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEACFLMQ*ILSYKP
Trigger: GGGCTTGTAACTCAGTATTCACTGCATTAGAAAACA...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTTTCCTCCCTGTCCAATaGCAGGTATTATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTFLPVQ*QVLSSH
Trigger: ATGTGAAGATAATACCTGTCATTGGACAGGGAGGAA...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGGGAGGCAACAGCTTTaGCGTCTAGTGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPGRQQL*RLVSLF
Trigger: GAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTCAAGGGAGATGGGAGTaGTTATATTGCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTQGRWE*LYCLKP
Trigger: TGGTTTCAAGCAATATAATCACTCCCATCTCCCTTG...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CGGGAGGCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCAAGGGAGATGGGAGTaGTTATATTGCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: REATALTSSEPFLLSLCLQGRWE*LYCLKP
Trigger: TGGTTTCAAGCAATATAATCACTCCCATCTCCCTTG...CAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp TTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCTCCTCAGGAATTCCAAATaGCCGAAGGAACAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LYKMASSLPALHRKELVLLRNSK*PKEQSF
Trigger: GAAGCTTTGTTCCTTCGGTCATTTGGAATTCCTGAG...GAGAACCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGCGATTGCACCTTCTATaGTGTGAAAAAGTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVRLHLL*CEKVAK
Trigger: TTTAGCAACTTTTTCACATCATAGAAGGTGCAATCG...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GTTTCAGTTGTGATCGCACCTCTCCAAACTCCAGCTGGAGCAGTTCATTGTAGCCTTTTTCACATGCCCTaGAGAATCCATTACATTGGT +
Preference number: 4 (lower is better)
Translates to: VSVVIAPLQTPAGAVHCSLFHMP*RIHYIG
Trigger: ACCAATGTAATGGATTCTGCAGGGCATGTGAAAAAG...GCTACAATGAACTGCTCCAGCTGGAGTTTGGAGAGGTGCGATCACAACTGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR GCA 90 bp CAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTTTTCACATGCCCTaGAGAATCCATTACATTGGT +
Preference number: 4 (lower is better)
Translates to: QLSWNVSGPWKSVVSGWKLFHMP*RIHYIG
Trigger: ACCAATGTAATGGATTCTGCAGGGCATGTGAAAAAG...TTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATCCCTGCTTTTTCACATaGCCTGCAGAATCCATTACA +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHPCFFT*PAESIT
Trigger: TGTAATGGATTCTGCAGGGCATGTGAAAAAGCAGGG...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCCCCTGCTTTTTCACATaGCCTGCAGAATCCATTACA +
Preference number: 4 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVPCFFT*PAESIT
Trigger: TGTAATGGATTCTGCAGGGCATGTGAAAAAGCAGGG...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS-3UTR GCA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACTTCAAATGCAGGATTTaGATACTGTATAAAACGGTC +
Preference number: 4 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHFKCRI*ILYKTV
Trigger: GACCGTTTTATACAGTATGCAAATCCTGCATTTGAA...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTTTGTTGTCAAGATGCTaGATTAAATCAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QYCRGRQGLDTSAHLISILLSRC*IKSGRS
Trigger: AGACCTGCCTGATTTAATGCAGCATCTTGACAACAA...AATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCATTGTTGTCAAGATGCTaGATTAAATCAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEALLSRC*IKSGRS
Trigger: AGACCTGCCTGATTTAATGCAGCATCTTGACAACAA...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTTTGTTGTCAAGATGCTaGATTAAATCAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFLLSRC*IKSGRS
Trigger: AGACCTGCCTGATTTAATGCAGCATCTTGACAACAA...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCATTGGCATGGGGATCATCATCTTTAGCACCAAACTGTGGTGAATATAACTCAGATCGGGGGCTGTTCTaGCTAGTACTGAAAGGACCA +
Preference number: 4 (lower is better)
Translates to: SLAWGSSSLAPNCGEYNSDRGLF*LVLKGP
Trigger: TGGTCCTTTCAGTACTAGGCAGAACAGCCCCCGATC...TGAGTTATATTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATCTTGATGAAATCTCATaGGGCCAAACTGCACATCAG +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHLDEIS*GQTAHQ
Trigger: CTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAG...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCCTTGATGAAATCTCATaGGGCCAAACTGCACATCAG +
Preference number: 4 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVLDEIS*GQTAHQ
Trigger: CTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAG...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGCTCCGTTTTTCTTTTTaGCATAGTAAATTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLLRFSF*HSKFLA
Trigger: GGCAAGGAATTTACTATGCCAAAAAGAAAAACGGAG...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGAAGAGTGTCGTCTCTaGCTGGAAACTTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVEECRL*LETSVA
Trigger: TGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTC...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp AAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCGAAGAGTGTCGTCTCTaGCTGGAAACTTCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: KSKAYCGWQPPVQKYQSPEECRL*LETSVA
Trigger: TGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTC...GGGACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCATTGGCATGGGGATCATCATCTTTAGCACCAAACTGTGGTGAATATAACTCAAATGTATCCGGGCCATaGAAGAGTGTCGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLAWGSSSLAPNCGEYNSNVSGP*KSVVSG
Trigger: GCCAGAGACGACACTCTTCCATGGCCCGGATACATT...TGAGTTATATTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGAAGGCCTATTGTGGGTaGCAGCCTCCAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLKAYCG*QPPVQK
Trigger: TTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGAATTGTGGTAGGGATTaGAGGAATGATAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVNCGRD*RNDNWL
Trigger: AAGCCAATTATCATTCCTCCAATCCCTACCACAATT...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGATTTATCATCTCCAGTaGTCAGCTGGAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLIYHLQ*SAGRPR
Trigger: CCTTGGCCTTCCAGCTGACCACTGGAGATGATAAAT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTAAGAGATTTGGGATTTaGGGATGCTGCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTKRFGI*GCCRYF
Trigger: GAAATACCTGCAGCATCCCCAAATCCCAAATCTCTT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATAATGGCATTGGATGGTaGCTGCAGAAGGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHNGIGW*LQKVTD
Trigger: ATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGCTCTTTATAAATTTCTaGCATCAAAGATTCCCACCG +
Preference number: 4 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVLFINF*HQRFPP
Trigger: CGGTGGGAATCTTTGATGCCAGAAATTTATAAAGAG...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGCTCTTTATAAATTTCTaGCATCAAAGATTCCCACCG +
Preference number: 4 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLLFINF*HQRFPP
Trigger: CGGTGGGAATCTTTGATGCCAGAAATTTATAAAGAG...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCTTCCTCCCTGTCCAATaGCAGGTATTATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSFLPVQ*QVLSSH
Trigger: ATGTGAAGATAATACCTGTCATTGGACAGGGAGGAA...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp TGTCATTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCCTCCCTGTCCAATaGCAGGTATTATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: CHCTKWPAHFQHYTGRSWFLPVQ*QVLSSH
Trigger: ATGTGAAGATAATACCTGTCATTGGACAGGGAGGAA...CCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATTTCCTCCCTGTCCAATaGCAGGTATTATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHFLPVQ*QVLSSH
Trigger: ATGTGAAGATAATACCTGTCATTGGACAGGGAGGAA...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCATGCTTATTCAAGGTGTaGAGATACAGAACCTCTTTA +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEACLFKV*RYRTSL
Trigger: TAAAGAGGTTCTGTATCTTCACACCTTGAATAAGCA...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACACATACGTGGCAGTTGTaGAGCCATAAGCACATAACC +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTHTWQL*SHKHIT
Trigger: GGTTATGTGCTTATGGCTTCACAACTGCCACGTATG...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAGCTGGAAACTTCAGTTaGACGGGAGGCAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILAGNFS*TGGNSF
Trigger: AAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGC...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTCTTCCGAAATGCGTaGAGCCCACTCGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILFFRNA*SPLDAV
Trigger: TACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAA...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTGTCCTAACTTTTCTTTaGGAACCAACAAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTVLTFL*EPTRES
Trigger: AGACTCTCTTGTTGGTTCGCAAAGAAAAGTTAGGAC...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCTTGATGAAATCTCATaGGGCCAAACTGCACATCAG +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLLDEIS*GQTAHQ
Trigger: CTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAAGGCTTGATGAAATCTCATaGGGCCAAACTGCACATCAG +
Preference number: 4 (lower is better)
Translates to: YSFPDSLRKPSDIKPPTRLDEIS*GQTAHQ
Trigger: CTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAG...CCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp CAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTCCGTTTTTCTTTTTaGCATAGTAAATTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QLSWNVSGPWKSVVSGWKLRFSF*HSKFLA
Trigger: GGCAAGGAATTTACTATGCCAAAAAGAAAAACGGAG...TTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp CCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGCCCCAACAAGGTCATTaGCATGGGGATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: PQLHFVQSFPVFKVVVKMPQQGH*HGDHHL
Trigger: AAGATGATGATCCCCATGCCAATGACCTTGTTGGGG...CATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAATCAAAGGCCTATTGTaGGTGGCAGCCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPIKGLL*VAASSS
Trigger: TGAACTGGAGGCTGCCACCCACAATAGGCCTTTGAT...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAATCAAAGGCCTATTGTaGGTGGCAGCCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILIKGLL*VAASSS
Trigger: TGAACTGGAGGCTGCCACCCACAATAGGCCTTTGAT...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TTATCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGATCAAAGGCCTATTGTaGGTGGCAGCCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSVSPFSSSVAKGLLMLLIKGLL*VAASSS
Trigger: TGAACTGGAGGCTGCCACCCACAATAGGCCTTTGAT...CAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAAATTGTGGTAGGGATTaGAGGAATGATAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: CIRRLELFQSPGFYTVEANCGRD*RNDNWL
Trigger: AAGCCAATTATCATTCCTCCAATCCCTACCACAATT...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGATTTATCATCTCCAGTaGTCAGCTGGAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PQLHFVQSFPVFKVVVKMIYHLQ*SAGRPR
Trigger: CCTTGGCCTTCCAGCTGACCACTGGAGATGATAAAT...CATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAAAAGCTTCAGGGCTCTaGGTGGTGTCTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILKASGL*VVSPTI
Trigger: AATAGTGGGAGACACCACCCAGAGCCCTGAAGCTTT...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GCATTGATAATATTGATTACCTTGGTGATGGGCGCCTCAATTGTCATGGAATGTAAAGCTTCAGGGCTCTaGGTGGTGTCTCCCACTATT +
Preference number: 4 (lower is better)
Translates to: ALIILITLVMGASIVMECKASGL*VVSPTI
Trigger: AATAGTGGGAGACACCACCCAGAGCCCTGAAGCTTT...ACATTCCATGACAATTGAGGCGCCCATCACCAAGGTAATCAATATTATCAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCATCTTTAGCACCAAACTGTGGTGAATATAACTCAGTGGTTCTTAGAATTTCCAGGACCAAGGAGCTCTaGCTGCCCTCAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: SSLAPNCGEYNSVVLRISRTKEL*LPSGIP
Trigger: TGGAATTCCTGAGGGCAGCCAGAGCTCCTTGGTCCT...GGAAATTCTAAGAACCACTGAGTTATATTCACCACAGTTTGGTGCTAAAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTACTGATGTCCCCGTaGGCTTTCACAGGCTATGCA +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILLLMSP*AFTGYA
Trigger: TGCATAGCCTGTGAAAGCCCACGGGGACATCAGTAA...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
3UTR CAA 72 bp GGATTGGACACATCAGCACATTTAATCAGCATTCGTTaGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCATA +
Preference number: 4 (lower is better)
Translates to: GLDTSAHLISIR*IRVRFSGVLSI
Trigger: TATGCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR TCA 90 bp CGGGAGGCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGATGATGATAATGTCATaGTGTTTGTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: REATALTSSEPFLLSLCLMMIMS*CLSRKQ
Trigger: CTGTTTCCTGGACAAACATCATGACATTATCATCAT...CAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS-3UTR TCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCAAGGGAGATGGGAGTaGTTATATTGCTTGAAACCA +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLQGRWE*LYCLKP
Trigger: TGGTTTCAAGCAATATAATCACTCCCATCTCCCTTG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATGTTTTACCAGAAACTaGGGCAAACCGTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILCFTRN*GKPWSS
Trigger: TGAGGACCACGGTTTGCCTCAGTTTCTGGTAAAACA...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTCGATTGCACCTTCTATaGTGTGAAAAAGTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTRLHLL*CEKVAK
Trigger: TTTAGCAACTTTTTCACATCATAGAAGGTGCAATCG...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp CGGGAGGCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGTTATGTTTGCCTGTCTaGTTATCTGAGTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: REATALTSSEPFLLSLCLLCLPV*LSEFQL
Trigger: CAACTGAAACTCAGATAATCAGACAGGCAAACATAA...CAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR GCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACACCCTGCTTTTTCACATaGCCTGCAGAATCCATTACA +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTPCFFT*PAESIT
Trigger: TGTAATGGATTCTGCAGGGCATGTGAAAAAGCAGGG...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATTTGACATGCTCAAAGTaGTTTGTCATTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHLTCSK*FVISVA
Trigger: AGCCACAGAAATGACAAAGCACTTTGAGCATGTCAA...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCATCTTTAGCATTGACATGCTCAAAGTaGTTTGTCATTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SDIKPPTRSLAWGSSSLALTCSK*FVISVA
Trigger: AGCCACAGAAATGACAAAGCACTTTGAGCATGTCAA...TGCTAAAGATGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCATTTGGGATTTGGGGATaGTGCAGGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAFGIWG*CRYFCQ
Trigger: TTGACAGAAATACCTGCAGCATCCCCAAATCCCAAA...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATTTGTTGTCAAGATGCTaGATTAAATCAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHLLSRC*IKSGRS
Trigger: AGACCTGCCTGATTTAATGCAGCATCTTGACAACAA...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCTTGTTGTCAAGATGCTaGATTAAATCAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSLLSRC*IKSGRS
Trigger: AGACCTGCCTGATTTAATGCAGCATCTTGACAACAA...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATAAGTTGTTGTCAAGATaGTGCATTAAATCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHKLLSR*CIKSGR
Trigger: CCTGCCTGATTTAATGCAGCATCTTGACAACAACTT...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATGTCCTAACTTTTCTTTaGGAACCAACAAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHVLTFL*EPTRES
Trigger: AGACTCTCTTGTTGGTTCGCAAAGAAAAGTTAGGAC...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp TCATCTTTAGCACCAAACTGTGGTGAATATAACTCAGTGGTTCTTAGAATTTCCAGTGTCGTCTCTGGCTaGAAACTTCAGTTGCACGGG +
Preference number: 4 (lower is better)
Translates to: SSLAPNCGEYNSVVLRISSVVSG*KLQLHG
Trigger: CCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACT...GGAAATTCTAAGAACCACTGAGTTATATTCACCACAGTTTGGTGCTAAAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TCATCTTTAGCACCAAACTGTGGTGAATATAACTCAGTGGTTCTTAGAATTTCCCCGAGCTATCCGTGGTaGGACATCATCAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SSLAPNCGEYNSVVLRISPSYPW*DIIKGD
Trigger: ATCTCCCTTGATGATGTCCCACCACGGATAGCTCGG...GGAAATTCTAAGAACCACTGAGTTATATTCACCACAGTTTGGTGCTAAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGTGTCATTGTACAAAATaGCCAGCTCACTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLCHCTK*PAHFQH
Trigger: ATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GGATTGGACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTGTCATTGTACAAAATaGCCAGCTCACTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GLDTSAHLISIRLIRVRFCHCTK*PAHFQH
Trigger: ATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA...GAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTATCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGATTTATCATCTCCAGTaGTCAGCTGGAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSVSPFSSSVAKGLLMLLIYHLQ*SAGRPR
Trigger: CCTTGGCCTTCCAGCTGACCACTGGAGATGATAAAT...CAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTATTTATCATCTCCAGTaGTCAGCTGGAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSIYHLQ*SAGRPR
Trigger: CCTTGGCCTTCCAGCTGACCACTGGAGATGATAAAT...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGAAGAGATTTGGGATTTaGGGATGCTGCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLKRFGI*GCCRYF
Trigger: GAAATACCTGCAGCATCCCCAAATCCCAAATCTCTT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp AAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCAAGAGATTTGGGATTTaGGGATGCTGCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: KSKAYCGWQPPVQKYQSPKRFGI*GCCRYF
Trigger: GAAATACCTGCAGCATCCCCAAATCCCAAATCTCTT...GGGACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGAGTCTAGTTTTACCTTaGGGAGTTACCTGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLSLVLP*GVTCEV
Trigger: CACTTCACAGGTAACTCCCCAAGGTAAAACTAGACT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTACATTGTAGCAGGCCATaGTGTTGGGGTTTTCTACAT +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILHCSRP*CWGFLH
Trigger: ATGTAGAAAACCCCAACATCATGGCCTGCTACAATG...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCACATTGTAGCAGGCCATaGTGTTGGGGTTTTCTACAT +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPHCSRP*CWGFLH
Trigger: ATGTAGAAAACCCCAACATCATGGCCTGCTACAATG...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGTGTTTTCTAATGCAGTaGATACTGAGTTACAAGCCC +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLCFLMQ*ILSYKP
Trigger: GGGCTTGTAACTCAGTATTCACTGCATTAGAAAACA...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCTTTTTCACATGCCCTaGAGAATCCATTACATTGGT +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLLFHMP*RIHYIG
Trigger: ACCAATGTAATGGATTCTGCAGGGCATGTGAAAAAG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp AAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCCTTTTTCACATGCCCTaGAGAATCCATTACATTGGT +
Preference number: 4 (lower is better)
Translates to: KSKAYCGWQPPVQKYQSPLFHMP*RIHYIG
Trigger: ACCAATGTAATGGATTCTGCAGGGCATGTGAAAAAG...GGGACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTACCCTGCTTTTTCACATaGCCTGCAGAATCCATTACA +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILPCFFT*PAESIT
Trigger: TGTAATGGATTCTGCAGGGCATGTGAAAAAGCAGGG...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTTTGACATGCTCAAAGTaGTTTGTCATTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVLTCSK*FVISVA
Trigger: AGCCACAGAAATGACAAAGCACTTTGAGCATGTCAA...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCACTTGATGAAATCTCATaGGGCCAAACTGCACATCAG +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPLDEIS*GQTAHQ
Trigger: CTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAG...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CATGTCGATAATCCCCTGGCGCAGTGTCCGATAATCATTCCTCTCCATGTTTTTTGTCGAGGATTTCTGTaGTCTATGATGATAATGTCA +
Preference number: 4 (lower is better)
Translates to: HVDNPLAQCPIIIPLHVFCRGFL*SMMIMS
Trigger: TGACATTATCATCATAGACCACAGAAATCCTCGACA...AAAAACATGGAGAGGAATGATTATCGGACACTGCGCCAGGGGATTATCGACATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCTGTCGAGGATTTCTGTaGTCTATGATGATAATGTCA +
Preference number: 4 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVCRGFL*SMMIMS
Trigger: TGACATTATCATCATAGACCACAGAAATCCTCGACA...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATCTCCGTTTTTCTTTTTaGCATAGTAAATTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHLRFSF*HSKFLA
Trigger: GGCAAGGAATTTACTATGCCAAAAAGAAAAACGGAG...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTCTCCGTTTTTCTTTTTaGCATAGTAAATTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTLRFSF*HSKFLA
Trigger: GGCAAGGAATTTACTATGCCAAAAAGAAAAACGGAG...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCTCAATTGTGGTAGGGATTaGAGGAATGATAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LYKMASSLPALHRKELVLNCGRD*RNDNWL
Trigger: AAGCCAATTATCATTCCTCCAATCCCTACCACAATT...GAGAACCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAAGTAATGGCATTGGATaGTGGCTGCAGAAGGTTACT +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPSNGIG*WLQKVT
Trigger: AGTAACCTTCTGCAGCCACCATCCAATGCCATTACT...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCAATGATGATAATGTCATaGTGTTTGTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAMMIMS*CLSRKQ
Trigger: CTGTTTCCTGGACAAACATCATGACATTATCATCAT...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTTGGGATTTGGGGATaGTGCAGGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILFGIWG*CRYFCQ
Trigger: TTGACAGAAATACCTGCAGCATCCCCAAATCCCAAA...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACAAAGTTGTTGTCAAGATaGTGCATTAAATCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTKLLSR*CIKSGR
Trigger: CCTGCCTGATTTAATGCAGCATCTTGACAACAACTT...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp AAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCTGTCGAGGATTTCTGTaGTCTATGATGATAATGTCA +
Preference number: 4 (lower is better)
Translates to: KSKAYCGWQPPVQKYQSPCRGFL*SMMIMS
Trigger: TGACATTATCATCATAGACCACAGAAATCCTCGACA...GGGACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GCATTGATAATATTGATTACCTTGGTGATGGGCGCCTCAATTGTCATGGAATGTACAAGGTCATTGGCATaGGGATCATCATCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: ALIILITLVMGASIVMECTRSLA*GSSSLA
Trigger: TGCTAAAGATGATGATCCCCATGCCAATGACCTTGT...ACATTCCATGACAATTGAGGCGCCCATCACCAAGGTAATCAATATTATCAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp GGATTGGACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCAATTGTGGTAGGGATTaGAGGAATGATAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: GLDTSAHLISIRLIRVRFNCGRD*RNDNWL
Trigger: AAGCCAATTATCATTCCTCCAATCCCTACCACAATT...GAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CCA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGAATTGTGGTAGGGATTaGAGGAATGATAATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLNCGRD*RNDNWL
Trigger: AAGCCAATTATCATTCCTCCAATCCCTACCACAATT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCATGTCATTGTACAAAATaGCCAGCTCACTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPCHCTK*PAHFQH
Trigger: ATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAAAGAGATTTGGGATTTaGGGATGCTGCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPKRFGI*GCCRYF
Trigger: GAAATACCTGCAGCATCCCCAAATCCCAAATCTCTT...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAAGTCTAGTTTTACCTTaGGGAGTTACCTGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPSLVLP*GVTCEV
Trigger: CACTTCACAGGTAACTCCCCAAGGTAAAACTAGACT...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR TCA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACAATGATGATAATGTCATaGTGTTTGTCCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTMMIMS*CLSRKQ
Trigger: CTGTTTCCTGGACAAACATCATGACATTATCATCAT...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TTATCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGCTTTTTCACATGCCCTaGAGAATCCATTACATTGGT +
Preference number: 4 (lower is better)
Translates to: LSVSPFSSSVAKGLLMLLLFHMP*RIHYIG
Trigger: ACCAATGTAATGGATTCTGCAGGGCATGTGAAAAAG...CAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TTATCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGTTGACATGCTCAAAGTaGTTTGTCATTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSVSPFSSSVAKGLLMLLLTCSK*FVISVA
Trigger: AGCCACAGAAATGACAAAGCACTTTGAGCATGTCAA...CAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGTTGTCAAGATGCTaGATTAAATCAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILLLSRC*IKSGRS
Trigger: AGACCTGCCTGATTTAATGCAGCATCTTGACAACAA...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp TCATTGGCATGGGGATCATCATCTTTAGCACCAAACTGTGGTGAATATAACTCAAAGTTGTTGTCAAGATaGTGCATTAAATCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLAWGSSSLAPNCGEYNSKLLSR*CIKSGR
Trigger: CCTGCCTGATTTAATGCAGCATCTTGACAACAACTT...TGAGTTATATTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR GCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAAAGTTGTTGTCAAGATaGTGCATTAAATCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPKLLSR*CIKSGR
Trigger: CCTGCCTGATTTAATGCAGCATCTTGACAACAACTT...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp ACATATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACATGTCGAGGATTTCTGTaGTCTATGATGATAATGTCA +
Preference number: 4 (lower is better)
Translates to: TYSFPDSLRKPSDIKPPTCRGFL*SMMIMS
Trigger: TGACATTATCATCATAGACCACAGAAATCCTCGACA...TGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
3UTR CAA 72 bp CAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTaGCTAAAGATCCTATTGCCATTAGCCGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: QVSDCTFYDVKK*LKILLPLAVLK
Trigger: CTTAAGAACGGCTAATGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAACTGAGAGAATTGTTTaGAATAGACATGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPTERIV*NRHALS
Trigger: TGACAGAGCATGTCTATTGCAAACAATTCTCTCAGT...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCATGTCGAGGATTTCTGTaGTCTATGATGATAATGTCA +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPCRGFL*SMMIMS
Trigger: TGACATTATCATCATAGACCACAGAAATCCTCGACA...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR GCA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCATTCAAATGCAGGATTTaGATACTGTATAAAACGGTC +
Preference number: 4 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPFKCRI*ILYKTV
Trigger: GACCGTTTTATACAGTATGCAAATCCTGCATTTGAA...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS CCA 90 bp ATGCTCGGGGCACAGCCCATGCTGGCGGCGGCGCCGCGGACACGCTaGCGGGTAGCCGCGATCCGGTCAGCAAACGGCCCACCCGGCGCC +
Preference number: 5 (lower is better)
Translates to: MLGAQPMLAAAPRTR*RVAAIRSANGPPGA
Trigger: GGCGCCGGGTGGGCCGTTTGCTGACCGGATCGCGGCTACCCGCCAGCGTGTCCGCGGCGCCGCCGCCAGCATGGGCTGTGCCCCGAGCAT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310298.8
ENST00000339708.9
ENST00000394553.6
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS CCA 90 bp GCCGCGGGGCTAGGCGCGTCCTCGGCCACCAGGCGCTCGGAAATGTaGATGCTCGGGGCACAGCCCATGCTGGCGGCGGCGCCGCGGACA +
Preference number: 5 (lower is better)
Translates to: AAGLGASSATRRSEM*MLGAQPMLAAAPRT
Trigger: TGTCCGCGGCGCCGCCGCCAGCATGGGCTGTGCCCCGAGCATCCACATTTCCGAGCGCCTGGTGGCCGAGGACGCGCCTAGCCCCGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310298.8
ENST00000339708.9
ENST00000394553.6
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS GCA 90 bp CCTCGGACCCCCGCCAGTCTTCCCGCCCTCCCTGGGCTCCCGGTTTaGGGAGACCCTGGCGCGGTGCAGCCGGCTCCTTCCTGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: PRTPASLPALPGLPV*GDPGAVQPAPSCPL
Trigger: GAGAGGACAGGAAGGAGCCGGCTGCACCGCGCCAGGGTCTCCGCAAACCGGGAGCCCAGGGAGGGCGGGAAGACTGGCGGGGGTCCGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS GCA 90 bp GGAGGGCGGTGTCTCTGGGCGTCCATCACGTATCCTGTAGCGGGCTaGCTCGGACCCCCGCCAGTCTTCCCGCCCTCCCTGGGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: GGRCLWASITYPVAG*LGPPPVFPPSLGSR
Trigger: CCGGGAGCCCAGGGAGGGCGGGAAGACTGGCGGGGGTCCGAGGCAGCCCGCTACAGGATACGTGATGGACGCCCAGAGACACCGCCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS-3UTR CAA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTACCCTGGGCTCCCGGTTaGCGGAGACCCTGGCGCGGT +
Preference number: 5 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVPWAPG*RRPWRG
Trigger: ACCGCGCCAGGGTCTCCGCAAACCGGGAGCCCAGGG...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS GCA 90 bp AGGTGGTCCTCCCACAGGACAACTCAGGGCAGCCCTCTCCACCAATaGACTCAAGGCTGCCCTGGGCCCAGCAGGTCCACCCCTGTGATT +
Preference number: 5 (lower is better)
Translates to: RWSSHRTTQGSPLHQ*TQGCPGPSRSTPVI
Trigger: AATCACAGGGGTGGACCTGCTGGGCCCAGGGCAGCCTTGAGTGCATTGGTGGAGAGGGCTGCCCTGAGTTGTCCTGTGGGAGGACCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS GCA 90 bp GTTACTCCTTCCTTAGGGCCCCACCCTGACCAGGTACCAGGCTTGTaGACAATCCATACTCCTCAGGTAGCCTCCTCACACAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VTPSLGPHPDQVPGL*TIHTPQVASSHRPW
Trigger: CCAGGGCCTGTGTGAGGAGGCTACCTGAGGAGTATGGATTGTGCACAAGCCTGGTACCTGGTCAGGGTGGGGCCCTAAGGAAGGAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS CCA 90 bp AGAATTCTGGAGCCCAGACGAGCTTCTGCTTGGGTGATACCCGGCTaGGCTTTCTGCTATGTTCTCCTGAGGCTCCAGGAGGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RILEPRRASAWVIPG*AFCYVLLRLQEGSR
Trigger: CCTGCTGCCCTCCTGGAGCCTCAGGAGAACATAGCAGAAAGCCCAGCCGGGTATCACCCAAGCAGAAGCTCGTCTGGGCTCCAGAATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR CAA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCGGCTGGAAACTTCAGTaGCACGGGAGGCAACAGCTT +
Preference number: 5 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGGWKLQ*HGRQQL
Trigger: AAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS CCA 90 bp GCACATAACCCACGAAGAATTCTGGAGCCCAGACGAGCTTCTGCTTaGGTGATACCCGGCTGGGCTTTCTGCTATGTTCTCCTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: AHNPRRILEPRRASA*VIPGWAFCYVLLRL
Trigger: GAGCCTCAGGAGAACATAGCAGAAAGCCCAGCCGGGTATCACCCAAGCAGAAGCTCGTCTGGGCTCCAGAATTCTTCGTGGGTTATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS-3UTR CAA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTACCCCCAACAAGGTCATaGGCATGGGGATCATCATCT +
Preference number: 5 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVPPTRS*AWGSSS
Trigger: AGATGATGATCCCCATGCCAATGACCTTGTTGGGGG...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCACCATGATCTTAGCGTaGACTCGGAGCAGTGTAAGA +
Preference number: 5 (lower is better)
Translates to: PGHGRVSSLAGNFSCTGGTMILA*TRSSVR
Trigger: TCTTACACTGCTCCGAGTCAACGCTAAGATCATGGT...GCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS TCA 90 bp CCCAGGCCCATGGTGGGCAGCTGTGCATGTGTTCCTAAAGCAACCTaGACACAACTTGCAGGACCCAGGGAAGGCAAAAACAACCATGTC +
Preference number: 5 (lower is better)
Translates to: PRPMVGSCACVPKAT*TQLAGPREGKNNHV
Trigger: GACATGGTTGTTTTTGCCTTCCCTGGGTCCTGCAAGTTGTGTTCAGGTTGCTTTAGGAACACATGCACAGCTGCCCACCATGGGCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CCA 90 bp TTGTGCACAATCCATACTCCTCAGGTAGCCTCCTCACACAGGCCCTaGGAATCTAGTTCTCCCGCTGCTGAGCTCTGCATGAACTCACCT +
Preference number: 5 (lower is better)
Translates to: LCTIHTPQVASSHRP*ESSSPAAELCMNSP
Trigger: AGGTGAGTTCATGCAGAGCTCAGCAGCGGGAGAACTAGATTCCCAGGGCCTGTGTGAGGAGGCTACCTGAGGAGTATGGATTGTGCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS-3UTR CAA 90 bp CGGGAGGCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGGCTACTGCTACCTTCTaGCCGCTGCCGTCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: REATALTSSEPFLLSLCLATATF*PLPSRS
Trigger: GCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAGC...CAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTCCCCCAACAAGGTCATaGGCATGGGGATCATCATCT +
Preference number: 5 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPPPTRS*AWGSSS
Trigger: AGATGATGATCCCCATGCCAATGACCTTGTTGGGGG...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTCCCCCAACAAGGTCATaGGCATGGGGATCATCATCT +
Preference number: 5 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIPPTRS*AWGSSS
Trigger: AGATGATGATCCCCATGCCAATGACCTTGTTGGGGG...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTAGGGGTCGGCAGGGATaGGACACATCAGCACATTTA +
Preference number: 5 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIRGRQG*DTSAHL
Trigger: TAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCT...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS GCA 90 bp TCCTCACACAGGCCCTGGGAATCTAGTTCTCCCGCTGCTGAGCTCTaGATGAACTCACCTATTGTGGGTGGCAGCCTCCAGTTCAAAAAT +
Preference number: 5 (lower is better)
Translates to: SSHRPWESSSPAAEL*MNSPIVGGSLQFKN
Trigger: ATTTTTGAACTGGAGGCTGCCACCCACAATAGGTGAGTTCATGCAGAGCTCAGCAGCGGGAGAACTAGATTCCCAGGGCCTGTGTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS-3UTR CAA 90 bp TGTCATTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGGCTACTGCTACCTTCTaGCCGCTGCCGTCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: CHCTKWPAHFQHYTGRSWATATF*PLPSRS
Trigger: GCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAGC...CCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTTACCTGAAGTTGATCTaGATGAAATCTCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPYLKLI*MKSHGA
Trigger: GGCCCCATGAGATTTCATCAAGATCAACTTCAGGTA...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGCCTTATTGTTGCCATaGCACACTCTGATAATGGAC +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPALLLP*HTLIMD
Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp AAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACAGCCTTATTGTTGCCATaGCACACTCTGATAATGGAC +
Preference number: 5 (lower is better)
Translates to: KCVQPTRCSTAGVGRDWTALLLP*HTLIMD
Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGC...TGTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTGGAAACTTCAGTaGCACGGGAGGCAACAGCTT +
Preference number: 5 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVGWKLQ*HGRQQL
Trigger: AAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCGGCTGGAAACTTCAGTaGCACGGGAGGCAACAGCTT +
Preference number: 5 (lower is better)
Translates to: YLGELPVKCIRRLELFQSGWKLQ*HGRQQL
Trigger: AAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACAGGGGTCGGCAGGGATaGGACACATCAGCACATTTA +
Preference number: 5 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHRGRQG*DTSAHL
Trigger: TAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCT...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTTTGACAGTAATGGCATaGGATGGTGGCTGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGILTVMA*DGGCRR
Trigger: CCTTCTGCAGCCACCATCCAATGCCATTACTGTCAA...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGTCCATCAATACCCTTaGCAGGGGCACTCCAGACCT +
Preference number: 5 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVVHQYP*QGHSRP
Trigger: AGGTCTGGAGTGCCCCTGCAAAGGGTATTGATGGAC...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCTCTGGAGTCCTAAGCCAGACGAGCTTCTGCTaGGGTGATACCCGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: AHLISIRLIRVRFSGVLSQTSFC*GDTRLG
Trigger: GCCCAGCCGGGTATCACCCAAGCAGAAGCTCGTCTG...GCTTAGGACTCCAGAGAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS TCA 90 bp CACACAGGCCCTGGGAATCTAGTTCTCCCGCTGCTGAGCTCTGCATaGACTCACCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCA +
Preference number: 5 (lower is better)
Translates to: HTGPGNLVLPLLSSA*THLLWVAASSSKIS
Trigger: TGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGTGAGTTCATGCAGAGCTCAGCAGCGGGAGAACTAGATTCCCAGGGCCTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS TCA 90 bp GCACCTCTCCAAACTCCAGCTGGAGCAGTTCATTGTAGCAGGCCATaGTGTTGGGGTTTTCTACATACCTCTGCACAGTGCCTCTGCATC +
Preference number: 5 (lower is better)
Translates to: APLQTPAGAVHCSRP*CWGFLHTSAQCLCI
Trigger: GATGCAGAGGCACTGTGCAGAGGTATGTAGAAAACCCCAACATCATGGCCTGCTACAATGAACTGCTCCAGCTGGAGTTTGGAGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR CAA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTATACCTGAAGTTGATCTaGATGAAATCTCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVYLKLI*MKSHGA
Trigger: GGCCCCATGAGATTTCATCAAGATCAACTTCAGGTA...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTTTCTCAGCCTTATTGTaGCCATTGCACACTCTGATA +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPFSALL*PLHTLI
Trigger: TATCAGAGTGTGCAATGGCAACAATAAGGCTGAGAA...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTATTTTCTCAGCCTTATaGTTGCCATTGCACACTCTG +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPIFSAL*LPLHTL
Trigger: CAGAGTGTGCAATGGCAACAATAAGGCTGAGAAAAT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGCGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVREATA*TSSEPF
Trigger: AAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTGGCTGGAAACTTCAGTaGCACGGGAGGCAACAGCTT +
Preference number: 5 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFGWKLQ*HGRQQL
Trigger: AAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GAAATGCGTGCAGCCCACTCGATGCAGTACTGCAGGGGTCGGCAGGGATTGGACATGCTGTTGACAAATTaGTTGACATGCTCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: EMRAAHSMQYCRGRQGLDMLLTN*LTCSKC
Trigger: GCACTTTGAGCATGTCAACAAATTTGTCAACAGCAT...GTCCAATCCCTGCCGACCCCTGCAGTACTGCATCGAGTGGGCTGCACGCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTGTTGCCAAGGGTTTGTaGATGCTGTTGACAAATTTG +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPVAKGL*MLLTNL
Trigger: CAAATTTGTCAACAGCATCAACAAACCCTTGGCAAC...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTGTTGCCAAGGGTTaGTTGATGCTGTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPSVAKG*LMLLTN
Trigger: ATTTGTCAACAGCATCAACAAACCCTTGGCAACACT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCAGGGGTCGGCAGGGATaGGACACATCAGCACATTTA +
Preference number: 5 (lower is better)
Translates to: YLGELPVKCIRRLELFQSRGRQG*DTSAHL
Trigger: TAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ATGGCCCGAGCTATCCGTGGTGGGACATCATCAAGGGAGATGGGAGTGATTATAAGGGGTCGGCAGGGATaGGACACATCAGCACATTTA +
Preference number: 5 (lower is better)
Translates to: MARAIRGGTSSREMGVIIRGRQG*DTSAHL
Trigger: TAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCT...TATAATCACTCCCATCTCCCTTGATGATGTCCCACCACGGATAGCTCGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACTTGACAGTAATGGCATaGGATGGTGGCTGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHLTVMA*DGGCRR
Trigger: CCTTCTGCAGCCACCATCCAATGCCATTACTGTCAA...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGTGGCCAAGTCTCACTaGACAGTAATGGCATTGGAT +
Preference number: 5 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIVAKSH*TVMALD
Trigger: ATCCAATGCCATTACTGTCAAGTGAGACTTGGCCAC...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGTCCATCAATACCCTTaGCAGGGGCACTCCAGACCT +
Preference number: 5 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAVHQYP*QGHSRP
Trigger: AGGTCTGGAGTGCCCCTGCAAAGGGTATTGATGGAC...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTTCACGGTATTTGAAGTaGGCTTTGGCTCTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPSRYLK*ALALKY
Trigger: ATACTTCAGAGCCAAAGCCAACTTCAAATACCGTGA...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACAGCTACTGCTACCTTCTaGCCGCTGCCGTCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTATATF*PLPSRS
Trigger: GCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAGC...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTACTGATAGCCCATTGTaGTTTCAAATGCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPTDSPL*FQMQDL
Trigger: CAAATCCTGCATTTGAAACAACAATGGGCTATCAGT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAATTTTCTCAGCCTTATaGTTGCCATTGCACACTCTG +
Preference number: 5 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVIFSAL*LPLHTL
Trigger: CAGAGTGTGCAATGGCAACAATAAGGCTGAGAAAAT...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTCGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFREATA*TSSEPF
Trigger: AAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTCTTTCCTGGGCAGCATaGATAATATTGATTACCTTG +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPLSWAA*IILITL
Trigger: CAAGGTAATCAATATTATCAATGCTGCCCAGGAAAG...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ACTGATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTATGCTGTTGACAAATTaGTTGACATGCTCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: TDVPVGFHRLCRSGAVLPMLLTN*LTCSKC
Trigger: GCACTTTGAGCATGTCAACAAATTTGTCAACAGCAT...AGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACATCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTAAGTGTTGCCAAGGGTTaGTTGATGCTGTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVSVAKG*LMLLTN
Trigger: ATTTGTCAACAGCATCAACAAACCCTTGGCAACACT...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTATTAATCAGCATTCGTTaGATTAGGGTCCGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVLISIR*IRVRFS
Trigger: AGAGAACCGGACCCTAATCAAACGAATGCTGATTAA...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS CCA 90 bp AAAAAGAAAAGTCACAACTATTCTTTCCTTCCTGGAAACTCCAGGTaGTCCTCCCACAGGACAACTCAGGGCAGCCCTCTCCACCAATGC +
Preference number: 5 (lower is better)
Translates to: KKKSHNYSFLPGNSR*SSHRTTQGSPLHQC
Trigger: GCATTGGTGGAGAGGGCTGCCCTGAGTTGTCCTGTGGGAGGACCACCTGGAGTTTCCAGGAAGGAAAGAATAGTTGTGACTTTTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS-3UTR CAA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAGCTACTGCTACCTTCTaGCCGCTGCCGTCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILATATF*PLPSRS
Trigger: GCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAGC...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR CAA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGCTACTGCTACCTTCTaGCCGCTGCCGTCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPATATF*PLPSRS
Trigger: GCTTCGCGACGGCAGCGGCAAGAAGGTAGCAGTAGC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310298.8
ENST00000394553.6
CDS-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCATTCCTTGCCACTCCTaGCCTATCCTGATGCATGAA +
Preference number: 5 (lower is better)
Translates to: YLGELPVKCIRRLELFQSIPCHS*PILMHE
Trigger: TTCATGCATCAGGATAGGCAAGGAGTGGCAAGGAAT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGATTCCTTGCCACTCCTaGCCTATCCTGATGCATGAA +
Preference number: 5 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVIPCHS*PILMHE
Trigger: TTCATGCATCAGGATAGGCAAGGAGTGGCAAGGAAT...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCATAGTAAATTCCTaGCCACTCCTTGCCTATCCT +
Preference number: 5 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVGIVNS*PLLAYP
Trigger: AGGATAGGCAAGGAGTGGCAAGGAATTTACTATGCC...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCTCAGCCTTATTGTaGCCATTGCACACTCTGATA +
Preference number: 5 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPFSALL*PLHTLI
Trigger: TATCAGAGTGTGCAATGGCAACAATAAGGCTGAGAA...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCGCAGCATTGATAATATaGATTACCTTGGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: VSSLAGNFSCTGGNSFDVAALII*ITLVMG
Trigger: GCCCATCACCAAGGTAATCAATATTATCAATGCTGC...GACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTCCCCCAACAAGGTCATaGGCATGGGGATCATCATCT +
Preference number: 5 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTPPTRS*AWGSSS
Trigger: AGATGATGATCCCCATGCCAATGACCTTGTTGGGGG...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGAGCACAGCAGTGTCATaGTACAAAATGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVSTAVS*YKMASS
Trigger: TGAGCTGGCCATTTTGTACAATGACACTGCTGTGCT...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp AATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGGAAACTTCAGTTGCACAGCACAGCAGTGTCATaGTACAAAATGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: NVSGPWKSVVSGWKLQLHSTAVS*YKMASS
Trigger: TGAGCTGGCCATTTTGTACAATGACACTGCTGTGCT...GTGCAACTGAAGTTTCCAGCCAGAGACGACACTCTTCCATGGCCCGGATACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTGTTGCCAAGGGTTTGTaGATGCTGTTGACAAATTTG +
Preference number: 5 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIVAKGL*MLLTNL
Trigger: CAAATTTGTCAACAGCATCAACAAACCCTTGGCAAC...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTGTTGCCAAGGGTTTGTaGATGCTGTTGACAAATTTG +
Preference number: 5 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPVAKGL*MLLTNL
Trigger: CAAATTTGTCAACAGCATCAACAAACCCTTGGCAAC...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTAAAGAGATTTGGGATTaGGGGATGCTGCAGGTATTT +
Preference number: 5 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPKEIWD*GMLQVF
Trigger: AAATACCTGCAGCATCCCCAAATCCCAAATCTCTTT...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGGTGGCCAAGTCTCACTaGACAGTAATGGCATTGGAT +
Preference number: 5 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLVAKSH*TVMALD
Trigger: ATCCAATGCCATTACTGTCAAGTGAGACTTGGCCAC...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATGTCCATCAATACCCTTaGCAGGGGCACTCCAGACCT +
Preference number: 5 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHVHQYP*QGHSRP
Trigger: AGGTCTGGAGTGCCCCTGCAAAGGGTATTGATGGAC...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ATGTCCCCGTGGGCTTTCACAGGCTATGCAGATCGGGGGCTGTTCTGCCTAGTATTGCTAAAGATCCTATaGCCATTAGCCGTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: MSPWAFTGYADRGLFCLVLLKIL*PLAVLK
Trigger: CTTAAGAACGGCTAATGGCAATAGGATCTTTAGCAA...TACTAGGCAGAACAGCCCCCGATCTGCATAGCCTGTGAAAGCCCACGGGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTAGTCCTAACTTTTCTTaGCGAACCAACAAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGISPNFS*RTNKRV
Trigger: GACTCTCTTGTTGGTTCGCAAAGAAAAGTTAGGACT...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCTACCTGAAGTTGATCTaGATGAAATCTCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: YLGELPVKCIRRLELFQSYLKLI*MKSHGA
Trigger: GGCCCCATGAGATTTCATCAAGATCAACTTCAGGTA...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TCGCACCTCTCCAAACTCCAGCTGGAGCAGTTCATTGTAGCAGGCCATGATGTTTACCTGAAGTTGATCTaGATGAAATCTCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: SHLSKLQLEQFIVAGHDVYLKLI*MKSHGA
Trigger: GGCCCCATGAGATTTCATCAAGATCAACTTCAGGTA...AACATCATGGCCTGCTACAATGAACTGCTCCAGCTGGAGTTTGGAGAGGTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559086.5
CDS-3UTR CAA 90 bp GTGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCACTGATAGCCCATTGTaGTTTCAAATGCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: VSSLAGNFSCTGGNSFDVTDSPL*FQMQDL
Trigger: CAAATCCTGCATTTGAAACAACAATGGGCTATCAGT...GACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
CDS-3UTR CAA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACTTCTCAGCCTTATTGTaGCCATTGCACACTCTGATA +
Preference number: 5 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHFSALL*PLHTLI
Trigger: TATCAGAGTGTGCAATGGCAACAATAAGGCTGAGAA...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGCCTGTCCGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: ATALTSSEPFLLSLCLPVREATA*TSSEPF
Trigger: AAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG...GACAGGCAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCTGCAGCATTGATAATATaGATTACCTTGGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: CRLWLETSVAREATALTSAALII*ITLVMG
Trigger: GCCCATCACCAAGGTAATCAATATTATCAATGCTGC...AGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GCGATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCCCCCCAACAAGGTCATaGGCATGGGGATCATCATCT +
Preference number: 5 (lower is better)
Translates to: AMSAATSSIGSKVSFILSPPTRS*AWGSSS
Trigger: AGATGATGATCCCCATGCCAATGACCTTGTTGGGGG...GGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCATCGC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCTCCCCCCAACAAGGTCATaGGCATGGGGATCATCATCT +
Preference number: 5 (lower is better)
Translates to: LYKMASSLPALHRKELVLPPTRS*AWGSSS
Trigger: AGATGATGATCCCCATGCCAATGACCTTGTTGGGGG...GAGAACCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCGTTTACCATGATCTTAGCGTaGACTCGGAGCAGTGTAAGA +
Preference number: 5 (lower is better)
Translates to: LQGSAGIGHISTFNQHSFTMILA*TRSSVR
Trigger: TCTTACACTGCTCCGAGTCAACGCTAAGATCATGGT...AAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTCAGCGACCTCATCAATaGGATCTAAAGTTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGIQRPHQ*DLKFPL
Trigger: TAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTG...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CATGTCGATAATCCCCTGGCGCAGTGTCCGATAATCATTCCTCTCCATGTTTTTAGGGGTCGGCAGGGATaGGACACATCAGCACATTTA +
Preference number: 5 (lower is better)
Translates to: HVDNPLAQCPIIIPLHVFRGRQG*DTSAHL
Trigger: TAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCT...AAAAACATGGAGAGGAATGATTATCGGACACTGCGCCAGGGGATTATCGACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TGTCGTCTCTGGCTGGAAACTTCAGTTGCACGGGAGGCAACAGCTTTGACGTCTAAAGAGATTTGGGATTaGGGGATGCTGCAGGTATTT +
Preference number: 5 (lower is better)
Translates to: CRLWLETSVAREATALTSKEIWD*GMLQVF
Trigger: AAATACCTGCAGCATCCCCAAATCCCAAATCTCTTT...AGACGTCAAAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCCAGAGACGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGATTTGGTCACGGTATTaGAAGTTGGCTTTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLIWSRY*KLALAL
Trigger: CAGAGCCAAAGCCAACTTCAAATACCGTGACCAAAT...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTTACCTGAAGTTGATCTaGATGAAATCTCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: QYCRGRQGLDTSAHLISIYLKLI*MKSHGA
Trigger: GGCCCCATGAGATTTCATCAAGATCAACTTCAGGTA...AATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCCTGACTGATAGCCCATaGTTGTTTCAAATGCAGGAT +
Preference number: 5 (lower is better)
Translates to: YLGELPVKCIRRLELFQSLTDSP*LFQMQD
Trigger: ATCCTGCATTTGAAACAACAATGGGCTATCAGTCAG...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGCTGACTGATAGCCCATaGTTGTTTCAAATGCAGGAT +
Preference number: 5 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLLTDSP*LFQMQD
Trigger: ATCCTGCATTTGAAACAACAATGGGCTATCAGTCAG...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ATGGCCCGAGCTATCCGTGGTGGGACATCATCAAGGGAGATGGGAGTGATTATATTCTCAGCCTTATTGTaGCCATTGCACACTCTGATA +
Preference number: 5 (lower is better)
Translates to: MARAIRGGTSSREMGVIIFSALL*PLHTLI
Trigger: TATCAGAGTGTGCAATGGCAACAATAAGGCTGAGAA...TATAATCACTCCCATCTCCCTTGATGATGTCCCACCACGGATAGCTCGGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCATTTTCTCAGCCTTATaGTTGCCATTGCACACTCTG +
Preference number: 5 (lower is better)
Translates to: YLGELPVKCIRRLELFQSIFSAL*LPLHTL
Trigger: CAGAGTGTGCAATGGCAACAATAAGGCTGAGAAAAT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CATATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAAGGCTGGAAACTTCAGTaGCACGGGAGGCAACAGCTT +
Preference number: 5 (lower is better)
Translates to: HIHSLIVFANHQTLSPQQGWKLQ*HGRQQL
Trigger: AAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC...TTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CTTGGTGATGGGCGCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGATAATATTGATTACCTaGGTGATGGGCGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: LGDGRLNCHGMYPGHGRVIILIT*VMGASI
Trigger: AATTGAGGCGCCCATCACCAAGGTAATCAATATTAT...CACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGCGCCCATCACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGCAGCATTGATAATATaGATTACCTTGGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVAALII*ITLVMG
Trigger: GCCCATCACCAAGGTAATCAATATTATCAATGCTGC...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp AATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGGGCTTTCACCTTTCCTGGGCAGCATaGATAATATTGATTACCTTG +
Preference number: 5 (lower is better)
Translates to: NGIGWWLQKVTDVPVGFHLSWAA*IILITL
Trigger: CAAGGTAATCAATATTATCAATGCTGCCCAGGAAAG...GTGAAAGCCCACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GCCTCAATTGTCATGGAATGTATCCGGGCCATGGAAGAGTGTCGTCTCTGGCTGCTTTCCTGGGCAGCATaGATAATATTGATTACCTTG +
Preference number: 5 (lower is better)
Translates to: ASIVMECIRAMEECRLWLLSWAA*IILITL
Trigger: CAAGGTAATCAATATTATCAATGCTGCCCAGGAAAG...CAGCCAGAGACGACACTCTTCCATGGCCCGGATACATTCCATGACAATTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTACCATGATCTTAGCGTaGACTCGGAGCAGTGTAAGA +
Preference number: 5 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTTMILA*TRSSVR
Trigger: TCTTACACTGCTCCGAGTCAACGCTAAGATCATGGT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTAGCACAGCAGTGTCATaGTACAAAATGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTSTAVS*YKMASS
Trigger: TGAGCTGGCCATTTTGTACAATGACACTGCTGTGCT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CCTGCAGCAGGCCCAGGCTACAGTGGCCAAGTCTCACTTGACAGTAATGGCATTCTGTTGACAAATTTGTaGACATGCTCAAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: PAAGPGYSGQVSLDSNGILLTNL*TCSKCF
Trigger: AAAGCACTTTGAGCATGTCAACAAATTTGTCAACAG...AATGCCATTACTGTCAAGTGAGACTTGGCCACTGTAGCCTGGGCCTGCTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGTTAATCAGCATTCGTTaGATTAGGGTCCGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLLISIR*IRVRFS
Trigger: AGAGAACCGGACCCTAATCAAACGAATGCTGATTAA...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTAGGGGTCGGCAGGGATaGGACACATCAGCACATTTA +
Preference number: 5 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVRGRQG*DTSAHL
Trigger: TAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCT...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCAGTCCTAACTTTTCTTaGCGAACCAACAAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: YLGELPVKCIRRLELFQSSPNFS*RTNKRV
Trigger: GACTCTCTTGTTGGTTCGCAAAGAAAAGTTAGGACT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TCCCACTATTCAGGAGGTGGTCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTTCAAATGCAGGATTaGCATACTGAGTTTCAGTTG +
Preference number: 5 (lower is better)
Translates to: SHYSGGGRRFRSFISSSPFQMQD*HTEFQL
Trigger: CAACTGAAACTCAGTATGCAAATCCTGCATTTGAAA...AGGACTGGACGAAATGAAGCTGCGGAACCTCCGACCACCTCCTGAATAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478717.5
CDS GCA 90 bp GGCAAGGACAGCCTGAGCCTCCTTGGTAACTGTACACTTAAACCCTaGTTTTTCACATGCCCTGCAGAATCCATTACATTGGTTATCTTC +
Preference number: 5 (lower is better)
Translates to: GKDSLSLLGNCTLKP*FFTCPAESITLVIF
Trigger: GAAGATAACCAATGTAATGGATTCTGCAGGGCATGTGAAAAAGCAGGGTTTAAGTGTACAGTTACCAAGGAGGCTCAGGCTGTCCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000310298.8
ENST00000339708.9
ENST00000394553.6
ENST00000478717.5
ENST00000485596.5
ENST00000557819.6
ENST00000557957.5
ENST00000559086.5
ENST00000559742.5
ENST00000560789.5
CDS-3UTR CAA 90 bp CGGGAGGCAACAGCTTTGACGTCTAGTGAGCCTTTTCTCCTGTCTTTATGTTTGTACCTGAAGTTGATCTaGATGAAATCTCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: REATALTSSEPFLLSLCLYLKLI*MKSHGA
Trigger: GGCCCCATGAGATTTCATCAAGATCAACTTCAGGTA...CAAACATAAAGACAGGAGAAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGACTGATAGCCCATTGTaGTTTCAAATGCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVTDSPL*FQMQDL
Trigger: CAAATCCTGCATTTGAAACAACAATGGGCTATCAGT...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCATCTTTAGCAGGCATAGTAAATTCCTaGCCACTCCTTGCCTATCCT +
Preference number: 5 (lower is better)
Translates to: SDIKPPTRSLAWGSSSLAGIVNS*PLLAYP
Trigger: AGGATAGGCAAGGAGTGGCAAGGAATTTACTATGCC...TGCTAAAGATGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
CDS-3UTR CAA 90 bp CATATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAACGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: HIHSLIVFANHQTLSPQQREATA*TSSEPF
Trigger: AAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG...TTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGGCTGGAAACTTCAGTaGCACGGGAGGCAACAGCTT +
Preference number: 5 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPGWKLQ*HGRQQL
Trigger: AAGCTGTTGCCTCCCGTGCAACTGAAGTTTCCAGCC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TACCTTGGGGAGTTACCTGTGAAGTGCATTAGGCGGCTAGAGCTGTTTCAGAGCATAATATTGATTACCTaGGTGATGGGCGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: YLGELPVKCIRRLELFQSIILIT*VMGASI
Trigger: AATTGAGGCGCCCATCACCAAGGTAATCAATATTAT...GCTCTGAAACAGCTCTAGCCGCCTAATGCACTTCACAGGTAACTCCCCAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTACCATGATCTTAGCGTaGACTCGGAGCAGTGTAAGA +
Preference number: 5 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTTMILA*TRSSVR
Trigger: TCTTACACTGCTCCGAGTCAACGCTAAGATCATGGT...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CTTGACAGTAATGGCATTGGATGGTGGCTGCAGAAGGTTACTGATGTCCCCGTGCAGCGACCTCATCAATaGGATCTAAAGTTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: LDSNGIGWWLQKVTDVPVQRPHQ*DLKFPL
Trigger: TAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTG...CACGGGGACATCAGTAACCTTCTGCAGCCACCATCCAATGCCATTACTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTAGCACAGCAGTGTCATaGTACAAAATGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTSTAVS*YKMASS
Trigger: TGAGCTGGCCATTTTGTACAATGACACTGCTGTGCT...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGATGCTGTTGACAAATTaGTTGACATGCTCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLMLLTN*LTCSKC
Trigger: GCACTTTGAGCATGTCAACAAATTTGTCAACAGCAT...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCATTAATCAGCATTCGTTaGATTAGGGTCCGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TQWFLEFPAHGLGLLSQALISIR*IRVRFS
Trigger: AGAGAACCGGACCCTAATCAAACGAATGCTGATTAA...TGCCTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAAAAGAGATTTGGGATTaGGGGATGCTGCAGGTATTT +
Preference number: 5 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAKEIWD*GMLQVF
Trigger: AAATACCTGCAGCATCCCCAAATCCCAAATCTCTTT...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TACCAGAAACTGAGGCAAACCGTGGTCCTCATGTGCCTTTCTGAAGAGCTCCTGTTGCTAAAGATCCTATaGCCATTAGCCGTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: YQKLRQTVVLMCLSEELLLLKIL*PLAVLK
Trigger: CTTAAGAACGGCTAATGGCAATAGGATCTTTAGCAA...CAGGAGCTCTTCAGAAAGGCACATGAGGACCACGGTTTGCCTCAGTTTCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCATCACGGTATTTGAAGTaGGCTTTGGCTCTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: CIRRLELFQSPGFYTVEASRYLK*ALALKY
Trigger: ATACTTCAGAGCCAAAGCCAACTTCAAATACCGTGA...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTATTTGGTCACGGTATTaGAAGTTGGCTTTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTIWSRY*KLALAL
Trigger: CAGAGCCAAAGCCAACTTCAAATACCGTGACCAAAT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS TCA 90 bp TGTTTCCCAACTGACTGCCCTCCTCCAATCTCTCCCCTCAAACAGTaGCCTATTCTAGTAAACACATTACGAAGTTTGCTTAGTGATGGG +
Preference number: 5 (lower is better)
Translates to: CFPTDCPPPISPLKQ*PILVNTLRSLLSDG
Trigger: CCCATCACTAAGCAAACTTCGTAATGTGTTTACTAGAATAGGTCACTGTTTGAGGGGAGAGATTGGAGGAGGGCAGTCAGTTGGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS GCA 90 bp TTGAGTTGTGTAACTATGGGCCAGTCTCATACTGGTGTAACTGGATaGCAAAGCCAGAATTTTTATGAGGGAAGATGGTCCAAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LSCVTMGQSHTGVTG*QSQNFYEGRWSKRS
Trigger: GGACCTCTTGGACCATCTTCCCTCATAAAAATTCTGGCTTTGGCATCCAGTTACACCAGTATGAGACTGGCCCATAGTTACACAACTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS-3UTR CAA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAACTGATAGCCCATTGTaGTTTCAAATGCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: CIRRLELFQSPGFYTVEATDSPL*FQMQDL
Trigger: CAAATCCTGCATTTGAAACAACAATGGGCTATCAGT...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GGATTGGACACATCAGCACATTTAATCAGCATTCGTTTGATTAGGGTCCGGTTCATTCCTTGCCACTCCTaGCCTATCCTGATGCATGAA +
Preference number: 5 (lower is better)
Translates to: GLDTSAHLISIRLIRVRFIPCHS*PILMHE
Trigger: TTCATGCATCAGGATAGGCAAGGAGTGGCAAGGAAT...GAACCGGACCCTAATCAAACGAATGCTGATTAAATGTGCTGATGTGTCCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
CDS-3UTR CAA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCAATTCCTTGCCACTCCTaGCCTATCCTGATGCATGAA +
Preference number: 5 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAIPCHS*PILMHE
Trigger: TTCATGCATCAGGATAGGCAAGGAGTGGCAAGGAAT...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGGCATAGTAAATTCCTaGCCACTCCTTGCCTATCCT +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLGIVNS*PLLAYP
Trigger: AGGATAGGCAAGGAGTGGCAAGGAATTTACTATGCC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GCGATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCGCCTTATTGTTGCCATaGCACACTCTGATAATGGAC +
Preference number: 5 (lower is better)
Translates to: AMSAATSSIGSKVSFILSALLLP*HTLIMD
Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGC...GGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCATCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp ATAACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGCCTTATTGTTGCCATaGCACACTCTGATAATGGAC +
Preference number: 5 (lower is better)
Translates to: ITQWFLEFPAHGLGLLSQALLLP*HTLIMD
Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGC...CTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCACGGGAGGCAACAGCTTaGACGTCTAGTGAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPREATA*TSSEPF
Trigger: AAAAGGCTCACTAGACGTCAAAGCTGTTGCCTCCCG...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCACTTTCCTGGGCAGCATaGATAATATTGATTACCTTG +
Preference number: 5 (lower is better)
Translates to: RKPSDIKPPTRSLAWGSSLSWAA*IILITL
Trigger: CAAGGTAATCAATATTATCAATGCTGCCCAGGAAAG...TGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGACCATGATCTTAGCGTaGACTCGGAGCAGTGTAAGA +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLTMILA*TRSSVR
Trigger: TCTTACACTGCTCCGAGTCAACGCTAAGATCATGGT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCACAGCGACCTCATCAATaGGATCTAAAGTTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAQRPHQ*DLKFPL
Trigger: TAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTG...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAATGCTGTTGACAAATTaGTTGACATGCTCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: CIRRLELFQSPGFYTVEAMLLTN*LTCSKC
Trigger: GCACTTTGAGCATGTCAACAAATTTGTCAACAGCAT...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGTGGCCAAGTCTCACTaGACAGTAATGGCATTGGAT +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLVAKSH*TVMALD
Trigger: ATCCAATGCCATTACTGTCAAGTGAGACTTGGCCAC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCAGCCTTCTTTAGCACTAGTCCTAACTTTTCTTaGCGAACCAACAAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: ELFQSPGFYTVEAAFFSTSPNFS*RTNKRV
Trigger: GACTCTCTTGTTGGTTCGCAAAGAAAAGTTAGGACT...AGTGCTAAAGAAGGCTGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TTGTACAAAATGGCCAGCTCACTTCCAGCATTACACAGGAAGGAGTTGGTTCTCCTGACTGATAGCCCATaGTTGTTTCAAATGCAGGAT +
Preference number: 5 (lower is better)
Translates to: LYKMASSLPALHRKELVLLTDSP*LFQMQD
Trigger: ATCCTGCATTTGAAACAACAATGGGCTATCAGTCAG...GAGAACCAACTCCTTCCTGTGTAATGCTGGAAGTGAGCTGGCCATTTTGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
CDS-3UTR CAA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTCTGACTGATAGCCCATaGTTGTTTCAAATGCAGGAT +
Preference number: 5 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTLTDSP*LFQMQD
Trigger: ATCCTGCATTTGAAACAACAATGGGCTATCAGTCAG...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGCCTTATTGTTGCCATaGCACACTCTGATAATGGAC +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLALLLP*HTLIMD
Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGAGCACAGCAGTGTCATaGTACAAAATGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PQLHFVQSFPVFKVVVKMSTAVS*YKMASS
Trigger: TGAGCTGGCCATTTTGTACAATGACACTGCTGTGCT...CATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CAGTACTGCAGGGGTCGGCAGGGATTGGACACATCAGCACATTTAATCAGCATTCTGTTGACAAATTTGTaGACATGCTCAAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: QYCRGRQGLDTSAHLISILLTNL*TCSKCF
Trigger: AAAGCACTTTGAGCATGTCAACAAATTTGTCAACAG...AATGCTGATTAAATGTGCTGATGTGTCCAATCCCTGCCGACCCCTGCAGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TGCATTAGGCGGCTAGAGCTGTTTCAGAGCCCTGGGTTCTATACAGTAGAAGCACTGTTGACAAATTTGTaGACATGCTCAAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: CIRRLELFQSPGFYTVEALLTNL*TCSKCF
Trigger: AAAGCACTTTGAGCATGTCAACAAATTTGTCAACAG...TGCTTCTACTGTATAGAACCCAGGGCTCTGAAACAGCTCTAGCCGCCTAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CGCAAACCATCAGACATTAAGCCCCCAACAAGGTCATTGGCATGGGGATCATCACTGTTGACAAATTTGTaGACATGCTCAAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: RKPSDIKPPTRSLAWGSSLLTNL*TCSKCF
Trigger: AAAGCACTTTGAGCATGTCAACAAATTTGTCAACAG...TGATGATCCCCATGCCAATGACCTTGTTGGGGGCTTAATGTCTGATGGTTTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp ATAACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGGTTGCCAAGGGTTTGTaGATGCTGTTGACAAATTTG +
Preference number: 5 (lower is better)
Translates to: ITQWFLEFPAHGLGLLSQVAKGL*MLLTNL
Trigger: CAAATTTGTCAACAGCATCAACAAACCCTTGGCAAC...CTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATGTTGCCAAGGGTTTGTaGATGCTGTTGACAAATTTG +
Preference number: 5 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHVAKGL*MLLTNL
Trigger: CAAATTTGTCAACAGCATCAACAAACCCTTGGCAAC...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GCGATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCGTTGCCAAGGGTTTGTaGATGCTGTTGACAAATTTG +
Preference number: 5 (lower is better)
Translates to: AMSAATSSIGSKVSFILSVAKGL*MLLTNL
Trigger: CAAATTTGTCAACAGCATCAACAAACCCTTGGCAAC...GGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATAGTGTTGCCAAGGGTTaGTTGATGCTGTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHSVAKG*LMLLTN
Trigger: ATTTGTCAACAGCATCAACAAACCCTTGGCAACACT...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGATTTGGTCACGGTATTaGAAGTTGGCTTTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLIWSRY*KLALAL
Trigger: CAGAGCCAAAGCCAACTTCAAATACCGTGACCAAAT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCAGGCATAGTAAATTCCTaGCCACTCCTGAGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAGIVNS*PLLSFS
Trigger: ACTGAAACTCAGGAGTGGCAAGGAATTTACTATGCC...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559742.5
CDS-3UTR CAA 90 bp ATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCTTGTACCTGAAGTTGATCTaGATGAAATCTCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: MSAATSSIGSKVSFILSLYLKLI*MKSHGA
Trigger: GGCCCCATGAGATTTCATCAAGATCAACTTCAGGTA...CAAGGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGCTGACTGATAGCCCATaGTTGTTTCAAATGCAGGAT +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLLTDSP*LFQMQD
Trigger: ATCCTGCATTTGAAACAACAATGGGCTATCAGTCAG...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAGGCATAGTAAATTCCTaGCCACTCCTTGCCTATCCT +
Preference number: 5 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILGIVNS*PLLAYP
Trigger: AGGATAGGCAAGGAGTGGCAAGGAATTTACTATGCC...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTGGCATAGTAAATTCCTaGCCACTCCTTGCCTATCCT +
Preference number: 5 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSGIVNS*PLLAYP
Trigger: AGGATAGGCAAGGAGTGGCAAGGAATTTACTATGCC...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
CDS-3UTR CAA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATATAATATTGATTACCTaGGTGATGGGCGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHIILIT*VMGASI
Trigger: AATTGAGGCGCCCATCACCAAGGTAATCAATATTAT...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ATAACTCAGTGGTTCTTAGAATTTCCAGCACACGGTCTAGGGCTTCTGTCACAGATAATATTGATTACCTaGGTGATGGGCGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: ITQWFLEFPAHGLGLLSQIILIT*VMGASI
Trigger: AATTGAGGCGCCCATCACCAAGGTAATCAATATTAT...CTGTGACAGAAGCCCTAGACCGTGTGCTGGAAATTCTAAGAACCACTGAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGGCAGCATTGATAATATaGATTACCTTGGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLAALII*ITLVMG
Trigger: GCCCATCACCAAGGTAATCAATATTATCAATGCTGC...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp CAGTCTGAGAAAAATATTCTTCCGAAATGCGTGCAGCCCACTCGATGCAGTACTCTTTCCTGGGCAGCATaGATAATATTGATTACCTTG +
Preference number: 5 (lower is better)
Translates to: QSEKNILPKCVQPTRCSTLSWAA*IILITL
Trigger: CAAGGTAATCAATATTATCAATGCTGCCCAGGAAAG...AGTACTGCATCGAGTGGGCTGCACGCATTTCGGAAGAATATTTTTCTCAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATCTTTCCTGGGCAGCATaGATAATATTGATTACCTTG +
Preference number: 5 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHLSWAA*IILITL
Trigger: CAAGGTAATCAATATTATCAATGCTGCCCAGGAAAG...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAACCATGATCTTAGCGTaGACTCGGAGCAGTGTAAGA +
Preference number: 5 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILTMILA*TRSSVR
Trigger: TCTTACACTGCTCCGAGTCAACGCTAAGATCATGGT...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAAGCACAGCAGTGTCATaGTACAAAATGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPSTAVS*YKMASS
Trigger: TGAGCTGGCCATTTTGTACAATGACACTGCTGTGCT...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp AAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCCCAGTGTTGCCAAGGGTTaGTTGATGCTGTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: KSKAYCGWQPPVQKYQSPSVAKG*LMLLTN
Trigger: ATTTGTCAACAGCATCAACAAACCCTTGGCAACACT...GGGACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TCGGAGGTTCCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTAGTGTTGCCAAGGGTTaGTTGATGCTGTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: SEVPQLHFVQSFPVFKVVSVAKG*LMLLTN
Trigger: ATTTGTCAACAGCATCAACAAACCCTTGGCAACACT...AACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGGAACCTCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGTTAATCAGCATTCGTTaGATTAGGGTCCGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLLISIR*IRVRFS
Trigger: AGAGAACCGGACCCTAATCAAACGAATGCTGATTAA...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAAGGTTAATCAGCATTCGTTaGATTAGGGTCCGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: YSFPDSLRKPSDIKPPTRLISIR*IRVRFS
Trigger: AGAGAACCGGACCCTAATCAAACGAATGCTGATTAA...CCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGAAAGAGATTTGGGATTaGGGGATGCTGCAGGTATTT +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLKEIWD*GMLQVF
Trigger: AAATACCTGCAGCATCCCCAAATCCCAAATCTCTTT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GCGAACCAACAAGAGAGTCTAGTTTTACCTTGGGGAGTTACCTGTGAAGTGCATTTGCTAAAGATCCTATaGCCATTAGCCGTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: ANQQESLVLPWGVTCEVHLLKIL*PLAVLK
Trigger: CTTAAGAACGGCTAATGGCAATAGGATCTTTAGCAA...ATGCACTTCACAGGTAACTCCCCAAGGTAAAACTAGACTCTCTTGTTGGTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS GCA 90 bp GCACCAATGGAAGACTTAGTGTGTTCTGGTTACTGTGCTAAGGGCTaGACATGTTATTTCACTGAATCTGATAGTAATGTGGTGAGAGTT +
Preference number: 5 (lower is better)
Translates to: APMEDLVCSGYCAKG*TCYFTESDSNVVRV
Trigger: AACTCTCACCACATTACTATCAGATTCAGTGAAATAACATGTGCAGCCCTTAGCACAGTAACCAGAACACACTAAGTCTTCCATTGGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS-3UTR CAA 90 bp TATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAAGGACTGATAGCCCATTGTaGTTTCAAATGCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: YSFPDSLRKPSDIKPPTRTDSPL*FQMQDL
Trigger: CAAATCCTGCATTTGAAACAACAATGGGCTATCAGT...CCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478717.5
ENST00000485596.5
CDS-3UTR CAA 90 bp TCCCAAGTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTAGCCTTATTGTTGCCATaGCACACTCTGATAATGGAC +
Preference number: 5 (lower is better)
Translates to: SQVSDCTFYDVKKLLKILALLLP*HTLIMD
Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGC...TAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCACTTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp ACATATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACATTCTCAGCCTTATTGTaGCCATTGCACACTCTGATA +
Preference number: 5 (lower is better)
Translates to: TYSFPDSLRKPSDIKPPTFSALL*PLHTLI
Trigger: TATCAGAGTGTGCAATGGCAACAATAAGGCTGAGAA...TGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACAATTTTCTCAGCCTTATaGTTGCCATTGCACACTCTG +
Preference number: 5 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTIFSAL*LPLHTL
Trigger: CAGAGTGTGCAATGGCAACAATAAGGCTGAGAAAAT...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp ACATATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAATTTTCTCAGCCTTATaGTTGCCATTGCACACTCTG +
Preference number: 5 (lower is better)
Translates to: TYSFPDSLRKPSDIKPPTIFSAL*LPLHTL
Trigger: CAGAGTGTGCAATGGCAACAATAAGGCTGAGAAAAT...TGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TTGTTTGCAATAGACATGCTCTGTCACTGGCAGGAAGTCCATCAATACCCTTTGATAATATTGATTACCTaGGTGATGGGCGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: LFAIDMLCHWQEVHQYPLIILIT*VMGASI
Trigger: AATTGAGGCGCCCATCACCAAGGTAATCAATATTAT...CAAAGGGTATTGATGGACTTCCTGCCAGTGACAGAGCATGTCTATTGCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp TTGTTGTCAAGATGCTGCATTAAATCAGGCAGGTCTACAAAGGCATCCCAAGCACAGCGACCTCATCAATaGGATCTAAAGTTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: LLSRCCIKSGRSTKASQAQRPHQ*DLKFPL
Trigger: TAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTG...TGCTTGGGATGCCTTTGTAGACCTGCCTGATTTAATGCAGCATCTTGACAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TCATTGGCATGGGGATCATCATCTTTAGCACCAAACTGTGGTGAATATAACTCAATTTTCTCAGCCTTATaGTTGCCATTGCACACTCTG +
Preference number: 5 (lower is better)
Translates to: SLAWGSSSLAPNCGEYNSIFSAL*LPLHTL
Trigger: CAGAGTGTGCAATGGCAACAATAAGGCTGAGAAAAT...TGAGTTATATTCACCACAGTTTGGTGCTAAAGATGATGATCCCCATGCCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp ATGAGTGCAGCGACCTCATCAATTGGATCTAAAGTTTCCTTTATCCTCTCCTTGATAATATTGATTACCTaGGTGATGGGCGCCTCAATT +
Preference number: 5 (lower is better)
Translates to: MSAATSSIGSKVSFILSLIILIT*VMGASI
Trigger: AATTGAGGCGCCCATCACCAAGGTAATCAATATTAT...CAAGGAGAGGATAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTGCACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCAGCAGCATTGATAATATaGATTACCTTGGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPAALII*ITLVMG
Trigger: GCCCATCACCAAGGTAATCAATATTATCAATGCTGC...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTGCAGCATTGATAATATaGATTACCTTGGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSAALII*ITLVMG
Trigger: GCCCATCACCAAGGTAATCAATATTATCAATGCTGC...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TATTCATTCCCTGATAGTCTTCGCAAACCATCAGACATTAAGCCCCCAACAAGGCTGTTGACAAATTTGTaGACATGCTCAAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: YSFPDSLRKPSDIKPPTRLLTNL*TCSKCF
Trigger: AAAGCACTTTGAGCATGTCAACAAATTTGTCAACAG...CCTTGTTGGGGGCTTAATGTCTGATGGTTTGCGAAGACTATCAGGGAATGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp CCGCAGCTTCATTTCGTCCAGTCCTTTCCAGTATTTAAAGTTGTTGTCAAGATGATGCTGTTGACAAATTaGTTGACATGCTCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: PQLHFVQSFPVFKVVVKMMLLTN*LTCSKC
Trigger: GCACTTTGAGCATGTCAACAAATTTGTCAACAGCAT...CATCTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAATGAAGCTGCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGACAATGCTGTTGACAAATTaGTTGACATGCTCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: SVSPFSSSVAKGLLMLLTMLLTN*LTCSKC
Trigger: GCACTTTGAGCATGTCAACAAATTTGTCAACAGCAT...TGTCAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTAGTGTTGCCAAGGGTTaGTTGATGCTGTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSSVAKG*LMLLTN
Trigger: ATTTGTCAACAGCATCAACAAACCCTTGGCAACACT...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTTTAATCAGCATTCGTTaGATTAGGGTCCGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSLISIR*IRVRFS
Trigger: AGAGAACCGGACCCTAATCAAACGAATGCTGATTAA...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp TTATCAGTTTCCCCATTTTCTTCTAGTGTTGCCAAGGGTTTGTTGATGCTGTTGAAAGAGATTTGGGATTaGGGGATGCTGCAGGTATTT +
Preference number: 5 (lower is better)
Translates to: LSVSPFSSSVAKGLLMLLKEIWD*GMLQVF
Trigger: AAATACCTGCAGCATCCCCAAATCCCAAATCTCTTT...CAACAGCATCAACAAACCCTTGGCAACACTAGAAGAAAATGGGGAAACTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS-3UTR CAA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCATCACGGTATTTGAAGTaGGCTTTGGCTCTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPSRYLK*ALALKY
Trigger: ATACTTCAGAGCCAAAGCCAACTTCAAATACCGTGA...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS-3UTR CAA 90 bp GATAAATCAAAGGCCTATTGTGGGTGGCAGCCTCCAGTTCAAAAATATCAAAGTCAGCGACCTCATCAATaGGATCTAAAGTTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: DKSKAYCGWQPPVQKYQSQRPHQ*DLKFPL
Trigger: TAAAGGAAACTTTAGATCCAATTGATGAGGTCGCTG...ACTTTGATATTTTTGAACTGGAGGCTGCCACCCACAATAGGCCTTTGATTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS GCA 90 bp AAGCTGATGTCTAGTAATTATGGGCCACTGGCTCAGTTTCTGCATTaGTCTGCAATAATTTTATCTCTCAGAAGGCATAAAAAGAATGAG +
Preference number: 5 (lower is better)
Translates to: KLMSSNYGPLAQFLH*SAIILSLRRHKKNE
Trigger: CTCATTCTTTTTATGCCTTCTGAGAGATAAAATTATTGCAGAGCAATGCAGAAACTGAGCCAGTGGCCCATAATTACTAGACATCAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS-3UTR CAA 90 bp GTGAGCGATTGCACCTTCTATGATGTGAAAAAGTTGCTAAAGATCCTATTGCCACTGTTGACAAATTTGTaGACATGCTCAAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: VSDCTFYDVKKLLKILLPLLTNL*TCSKCF
Trigger: AAAGCACTTTGAGCATGTCAACAAATTTGTCAACAG...TGGCAATAGGATCTTTAGCAACTTTTTCACATCATAGAAGGTGCAATCGCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310298.8
ENST00000394553.6
ENST00000557957.5
CDS CCA 72 bp GGCGCTGCGGCGGCGGCGGCTTTCCTAGCGCGGCCCTaGAGCGACCCTGAGAGGCAGCCGCTCCCGCCTTGG +
Preference number: 6 (lower is better)
Translates to: GAAAAAAFLARP*SDPERQPLPPW
Trigger: CCAAGGCGGGAGCGGCTGCCTCTCAGGGTCGCTCCAGGGCCGCGCTAGGAAAGCCGCCGCCGCCGCAGCGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310298.8
CDS CCA 72 bp GCGGCGGCTGCGGTGGGAAGGGGGCGCTTAGGCGGGTaGCGTGCCGAGGCCGCCCCTCCGAACATGCCCTTC +
Preference number: 6 (lower is better)
Translates to: AAAAVGRGRLGG*RAEAAPPNMPF
Trigger: GAAGGGCATGTTCGGAGGGGCGGCCTCGGCACGCCACCCGCCTAAGCGCCCCCTTCCCACCGCAGCCGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394553.6
CDS GCA 72 bp GAAACGCGGCCGCCCCTTTTATCGCGGTGCGGGCGCTaGGGCGGCGGCGGCTTTCCTAGCGCGGCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: ETRPPLLSRCGR*GGGGFPSAALE
Trigger: CTCCAGGGCCGCGCTAGGAAAGCCGCCGCCGCCGCAGCGCCCGCACCGCGATAAAAGGGGCGGCCGCGTTTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310298.8
CDS GCA 72 bp GCGCGTCCTCGGCCACCAGGCGCTCGGAAATGTGGATaGTCGGGGCACAGCCCATGCTGGCGGCGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: ARPRPPGARKCG*SGHSPCWRRRR
Trigger: GCGGCGCCGCCGCCAGCATGGGCTGTGCCCCGAGCATCCACATTTCCGAGCGCCTGGTGGCCGAGGACGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310298.8
ENST00000339708.9
ENST00000394553.6
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS GCA 72 bp CCCGCCAGTCTTCCCGCCCTCCCTGGGCTCCCGGTTTaGGGAGACCCTGGCGCGGTGCAGCCGGCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: PASLPALPGLPV*GDPGAVQPAPS
Trigger: GGAAGGAGCCGGCTGCACCGCGCCAGGGTCTCCGCAAACCGGGAGCCCAGGGAGGGCGGGAAGACTGGCGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS CCA 72 bp GCACAGCCCATGCTGGCGGCGGCGCCGCGGACACGCTaGCGGGTAGCCGCGATCCGGTCAGCAAACGGCCCA +
Preference number: 6 (lower is better)
Translates to: AQPMLAAAPRTR*RVAAIRSANGP
Trigger: TGGGCCGTTTGCTGACCGGATCGCGGCTACCCGCCAGCGTGTCCGCGGCGCCGCCGCCAGCATGGGCTGTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310298.8
ENST00000339708.9
ENST00000394553.6
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS CCA 72 bp GCTGCCTCGGACCCCCGCCAGTCTTCCCGCCCTCCCTaGGCTCCCGGTTTGCGGAGACCCTGGCGCGGTGCA +
Preference number: 6 (lower is better)
Translates to: AASDPRQSSRPP*APGLRRPWRGA
Trigger: TGCACCGCGCCAGGGTCTCCGCAAACCGGGAGCCCAGGGAGGGCGGGAAGACTGGCGGGGGTCCGAGGCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS CAA 72 bp CCCCGCCAGTCTTCCCGCCCTCCCTGGGCTCCCGGTTaGCGGAGACCCTGGCGCGGTGCAGCCGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: PRQSSRPPWAPG*RRPWRGAAGSF
Trigger: GAAGGAGCCGGCTGCACCGCGCCAGGGTCTCCGCAAACCGGGAGCCCAGGGAGGGCGGGAAGACTGGCGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS TCA 72 bp GGCGTGCCGAGGCCGCCCCTCCGAACATGCCCTTCCTaGGGCAGGAGCCGACGGCCGCCTCTCACATCGCCG +
Preference number: 6 (lower is better)
Translates to: GVPRPPLRTCPS*GRSRRPPLTSP
Trigger: CGGCGATGTGAGAGGCGGCCGTCGGCTCCTGCCTCAGGAAGGGCATGTTCGGAGGGGCGGCCTCGGCACGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394553.6
CDS GCA 72 bp GGCTGCGGTGGGAAGGGGGCGCTTAGGCGGGTGGCGTaGCGAGGCCGCCCCTCCGAACATGCCCTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: GCGGKGALRRVA*RGRPSEHALPE
Trigger: CTCAGGAAGGGCATGTTCGGAGGGGCGGCCTCGGCACGCCACCCGCCTAAGCGCCCCCTTCCCACCGCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394553.6
CDS CCA 72 bp TCCCGCCCTCCCTGGGCTCCCGGTTTGCGGAGACCCTaGCGCGGTGCAGCCGGCTCCTTCCTGTCCTCTCCG +
Preference number: 6 (lower is better)
Translates to: SRPPWAPGLRRP*RGAAGSFLSSP
Trigger: CGGAGAGGACAGGAAGGAGCCGGCTGCACCGCGCCAGGGTCTCCGCAAACCGGGAGCCCAGGGAGGGCGGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS CAA 90 bp GCCTCGGACCCCCGCCAGTCTTCCCGCCCTCCCTGGGCTCCCGGTTaGCGGAGACCCTGGCGCGGTGCAGCCGGCTCCTTCCTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: ASDPRQSSRPPWAPG*RRPWRGAAGSFLSS
Trigger: AGAGGACAGGAAGGAGCCGGCTGCACCGCGCCAGGGTCTCCGCAAACCGGGAGCCCAGGGAGGGCGGGAAGACTGGCGGGGGTCCGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS CCA 72 bp CTAGGCGCGTCCTCGGCCACCAGGCGCTCGGAAATGTaGATGCTCGGGGCACAGCCCATGCTGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LGASSATRRSEM*MLGAQPMLAAA
Trigger: CGCCGCCGCCAGCATGGGCTGTGCCCCGAGCATCCACATTTCCGAGCGCCTGGTGGCCGAGGACGCGCCTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310298.8
ENST00000339708.9
ENST00000394553.6
ENST00000478717.5
ENST00000485596.5
ENST00000559742.5
CDS CCA 72 bp GGGGCTCCTCCCCCACCAGCTGGAGGGCGGTGTCTCTaGGCGTCCATCACGTATCCTGTAGCGGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: GAPPPPAGGRCL*ASITYPVAGCL
Trigger: GAGGCAGCCCGCTACAGGATACGTGATGGACGCCCAGAGACACCGCCCTCCAGCTGGTGGGGGAGGAGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS GCA 72 bp TGTCTCTGGGCGTCCATCACGTATCCTGTAGCGGGCTaGCTCGGACCCCCGCCAGTCTTCCCGCCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: CLWASITYPVAG*LGPPPVFPPSL
Trigger: CAGGGAGGGCGGGAAGACTGGCGGGGGTCCGAGGCAGCCCGCTACAGGATACGTGATGGACGCCCAGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS GCA 72 bp TCCCACAGGACAACTCAGGGCAGCCCTCTCCACCAATaGACTCAAGGCTGCCCTGGGCCCAGCAGGTCCACC +
Preference number: 6 (lower is better)
Translates to: SHRTTQGSPLHQ*TQGCPGPSRST
Trigger: GGTGGACCTGCTGGGCCCAGGGCAGCCTTGAGTGCATTGGTGGAGAGGGCTGCCCTGAGTTGTCCTGTGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS GCA 72 bp ACTCAGGGCAGCCCTCTCCACCAATGCACTCAAGGCTaGCCTGGGCCCAGCAGGTCCACCCCTGTGATTGAC +
Preference number: 6 (lower is better)
Translates to: TQGSPLHQCTQG*PGPSRSTPVID
Trigger: GTCAATCACAGGGGTGGACCTGCTGGGCCCAGGGCAGCCTTGAGTGCATTGGTGGAGAGGGCTGCCCTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS GCA 72 bp CGAGCTTCTGCTTGGGTGATACCCGGCTGGGCTTTCTaGTATGTTCTCCTGAGGCTCCAGGAGGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RASAWVIPGWAF*YVLLRLQEGSR
Trigger: CCTGCTGCCCTCCTGGAGCCTCAGGAGAACATAGCAGAAAGCCCAGCCGGGTATCACCCAAGCAGAAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS CCA 72 bp GAGCCCAGACGAGCTTCTGCTTGGGTGATACCCGGCTaGGCTTTCTGCTATGTTCTCCTGAGGCTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: EPRRASAWVIPG*AFCYVLLRLQE
Trigger: CTCCTGGAGCCTCAGGAGAACATAGCAGAAAGCCCAGCCGGGTATCACCCAAGCAGAAGCTCGTCTGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS CAA 90 bp CCTGTTACTCCTTCCTTAGGGCCCCACCCTGACCAGGTACCAGGCTaGTGCACAATCCATACTCCTCAGGTAGCCTCCTCACACAGGCCC +
Preference number: 6 (lower is better)
Translates to: PVTPSLGPHPDQVPG*CTIHTPQVASSHRP
Trigger: GGGCCTGTGTGAGGAGGCTACCTGAGGAGTATGGATTGTGCACAAGCCTGGTACCTGGTCAGGGTGGGGCCCTAAGGAAGGAGTAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS GCA 72 bp AGGCCCTGGGAATCTAGTTCTCCCGCTGCTGAGCTCTaGATGAACTCACCTATTGTGGGTGGCAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: RPWESSSPAAEL*MNSPIVGGSLQ
Trigger: CTGGAGGCTGCCACCCACAATAGGTGAGTTCATGCAGAGCTCAGCAGCGGGAGAACTAGATTCCCAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS GCA 72 bp TCCTTAGGGCCCCACCCTGACCAGGTACCAGGCTTGTaGACAATCCATACTCCTCAGGTAGCCTCCTCACAC +
Preference number: 6 (lower is better)
Translates to: SLGPHPDQVPGL*TIHTPQVASSH
Trigger: GTGTGAGGAGGCTACCTGAGGAGTATGGATTGTGCACAAGCCTGGTACCTGGTCAGGGTGGGGCCCTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS CAA 72 bp CCTTCCTTAGGGCCCCACCCTGACCAGGTACCAGGCTaGTGCACAATCCATACTCCTCAGGTAGCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: PSLGPHPDQVPG*CTIHTPQVASS
Trigger: TGAGGAGGCTACCTGAGGAGTATGGATTGTGCACAAGCCTGGTACCTGGTCAGGGTGGGGCCCTAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS TCA 72 bp CCTGGGAATCTAGTTCTCCCGCTGCTGAGCTCTGCATaGACTCACCTATTGTGGGTGGCAGCCTCCAGTTCA +
Preference number: 6 (lower is better)
Translates to: PGNLVLPLLSSA*THLLWVAASSS
Trigger: TGAACTGGAGGCTGCCACCCACAATAGGTGAGTTCATGCAGAGCTCAGCAGCGGGAGAACTAGATTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS CCA 72 bp CCACGAAGAATTCTGGAGCCCAGACGAGCTTCTGCTTaGGTGATACCCGGCTGGGCTTTCTGCTATGTTCTC +
Preference number: 6 (lower is better)
Translates to: PRRILEPRRASA*VIPGWAFCYVL
Trigger: GAGAACATAGCAGAAAGCCCAGCCGGGTATCACCCAAGCAGAAGCTCGTCTGGGCTCCAGAATTCTTCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS CAA 72 bp CCCACGAAGAATTCTGGAGCCCAGACGAGCTTCTGCTaGGGTGATACCCGGCTGGGCTTTCTGCTATGTTCT +
Preference number: 6 (lower is better)
Translates to: PTKNSGAQTSFC*GDTRLGFLLCS
Trigger: AGAACATAGCAGAAAGCCCAGCCGGGTATCACCCAAGCAGAAGCTCGTCTGGGCTCCAGAATTCTTCGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485596.5
CDS CCA 72 bp AGTCACAACTATTCTTTCCTTCCTGGAAACTCCAGGTaGTCCTCCCACAGGACAACTCAGGGCAGCCCTCTC +
Preference number: 6 (lower is better)
Translates to: SHNYSFLPGNSR*SSHRTTQGSPL
Trigger: GAGAGGGCTGCCCTGAGTTGTCCTGTGGGAGGACCACCTGGAGTTTCCAGGAAGGAAAGAATAGTTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561374.1
CDS TCA 72 bp ATGGTGGGCAGCTGTGCATGTGTTCCTAAAGCAACCTaGACACAACTTGCAGGACCCAGGGAAGGCAAAAAC +
Preference number: 6 (lower is better)
Translates to: MVGSCACVPKAT*TQLAGPREGKN
Trigger: GTTTTTGCCTTCCCTGGGTCCTGCAAGTTGTGTTCAGGTTGCTTTAGGAACACATGCACAGCTGCCCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CAA 72 bp CTGATACAGAGGTGCAGACAAAGAAGGGGTGCATTGTaGCACTTTCTCCCATTGTTGCAAGCCATTCCCCCT +
Preference number: 6 (lower is better)
Translates to: LIQRCRQRRGAL*HFLPLLQAIPP
Trigger: AGGGGGAATGGCTTGCAACAATGGGAGAAAGTGCAACAATGCACCCCTTCTTTGTCTGCACCTCTGTATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CAA 72 bp GCTGTGCATGTGTTCCTAAAGCAACCTGAACACAACTaGCAGGACCCAGGGAAGGCAAAAACAACCATGTCC +
Preference number: 6 (lower is better)
Translates to: AVHVFLKQPEHN*QDPGKAKTTMS
Trigger: GGACATGGTTGTTTTTGCCTTCCCTGGGTCCTGCAAGTTGTGTTCAGGTTGCTTTAGGAACACATGCACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CAA 90 bp TGGTGGGCAGCTGTGCATGTGTTCCTAAAGCAACCTGAACACAACTaGCAGGACCCAGGGAAGGCAAAAACAACCATGTCCTCCAAATAT +
Preference number: 6 (lower is better)
Translates to: WWAAVHVFLKQPEHN*QDPGKAKTTMSSKY
Trigger: ATATTTGGAGGACATGGTTGTTTTTGCCTTCCCTGGGTCCTGCAAGTTGTGTTCAGGTTGCTTTAGGAACACATGCACAGCTGCCCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS TCA 72 bp CATAGTAAATTCCTTGCCACTCCTGAGTTTCAGTTGTaGTCGCACCTCTCCAAACTCCAGCTGGAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: HSKFLATPEFQL*SHLSKLQLEQF
Trigger: GAACTGCTCCAGCTGGAGTTTGGAGAGGTGCGATCACAACTGAAACTCAGGAGTGGCAAGGAATTTACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559742.5
ENST00000560789.5
CDS CAA 72 bp CAAAGAAGGGGTGCATTGTTGCACTTTCTCCCATTGTaGCAAGCCATTCCCCCTCCAGTTGAAGAGACTTCT +
Preference number: 6 (lower is better)
Translates to: QRRGALLHFLPL*QAIPPPVEETS
Trigger: AGAAGTCTCTTCAACTGGAGGGGGAATGGCTTGCAACAATGGGAGAAAGTGCAACAATGCACCCCTTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CAA 72 bp TCACTGATACAGAGGTGCAGACAAAGAAGGGGTGCATaGTTGCACTTTCTCCCATTGTTGCAAGCCATTCCC +
Preference number: 6 (lower is better)
Translates to: SLIQRCRQRRGA*LHFLPLLQAIP
Trigger: GGGAATGGCTTGCAACAATGGGAGAAAGTGCAACAATGCACCCCTTCTTTGTCTGCACCTCTGTATCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CAA 72 bp ACACAGCAAGTGGTAGTGCTGGGATTCCACCCAGGTTaGTTTAGCTCCATACACTGTGCTGTAAACTCAGGA +
Preference number: 6 (lower is better)
Translates to: TQQVVVLGFHPG*FSSIHCAVNSG
Trigger: TCCTGAGTTTACAGCACAGTGTATGGAGCTAAACAAACCTGGGTGGAATCCCAGCACTACCACTTGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CAA 90 bp ATTAAGACCACACAGCAAGTGGTAGTGCTGGGATTCCACCCAGGTTaGTTTAGCTCCATACACTGTGCTGTAAACTCAGGACCACCAGAA +
Preference number: 6 (lower is better)
Translates to: IKTTQQVVVLGFHPG*FSSIHCAVNSGPPE
Trigger: TTCTGGTGGTCCTGAGTTTACAGCACAGTGTATGGAGCTAAACAAACCTGGGTGGAATCCCAGCACTACCACTTGCTGTGTGGTCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS TCA 72 bp TGTCCTCCAAATATCAGGGATCTGTGCTCTGATCACTaGTACAGAGGTGCAGACAAAGAAGGGGTGCATTGT +
Preference number: 6 (lower is better)
Translates to: CPPNIRDLCSDH*YRGADKEGVHC
Trigger: ACAATGCACCCCTTCTTTGTCTGCACCTCTGTATCAGTGATCAGAGCACAGATCCCTGATATTTGGAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS TCA 72 bp TACTGGTGTAACTGGATGCCAAAGCCAGAATTTTTATaGGGGAAGATGGTCCAAGAGGTCCACAGGAGAGTC +
Preference number: 6 (lower is better)
Translates to: YWCNWMPKPEFL*GKMVQEVHRRV
Trigger: GACTCTCCTGTGGACCTCTTGGACCATCTTCCCTCATAAAAATTCTGGCTTTGGCATCCAGTTACACCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS TCA 72 bp AGACCAAAGACTGAGGAGGAAGATTCTTCAGTAGGGTaGAAGAGTCAGAACAGACAGTGCATGGTTATTACC +
Preference number: 6 (lower is better)
Translates to: RPKTEEEDSSVG*KSQNRQCMVIT
Trigger: GGTAATAACCATGCACTGTCTGTTCTGACTCTTTCACCCTACTGAAGAATCTTCCTCCTCAGTCTTTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS TCA 72 bp ACTGACTGCCCTCCTCCAATCTCTCCCCTCAAACAGTaGCCTATTCTAGTAAACACATTACGAAGTTTGCTT +
Preference number: 6 (lower is better)
Translates to: TDCPPPISPLKQ*PILVNTLRSLL
Trigger: AAGCAAACTTCGTAATGTGTTTACTAGAATAGGTCACTGTTTGAGGGGAGAGATTGGAGGAGGGCAGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CAA 90 bp AAGAGTCAGAACAGACAGTGCATGGTTATTACCTATTCTCTTGAGTaGTGTAACTATGGGCCAGTCTCATACTGGTGTAACTGGATGCCA +
Preference number: 6 (lower is better)
Translates to: KSQNRQCMVITYSLE*CNYGPVSYWCNWMP
Trigger: TGGCATCCAGTTACACCAGTATGAGACTGGCCCATAGTTACACAACTCAAGAGAATAGGTAATAACCATGCACTGTCTGTTCTGACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CAA 90 bp GGTGAAAGAGTCAGAACAGACAGTGCATGGTTATTACCTATTCTCTaGAGTTGTGTAACTATGGGCCAGTCTCATACTGGTGTAACTGGA +
Preference number: 6 (lower is better)
Translates to: GERVRTDSAWLLPIL*SCVTMGQSHTGVTG
Trigger: TCCAGTTACACCAGTATGAGACTGGCCCATAGTTACACAACTCAAGAGAATAGGTAATAACCATGCACTGTCTGTTCTGACTCTTTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CCA 72 bp CTAAAAGTACCTGAAGTTGATCTTGATGAAATCTCATaGGGCCAAACTGCACATCAGCTACTGCTACCTTCT +
Preference number: 6 (lower is better)
Translates to: LKVPEVDLDEIS*GQTAHQLLLPS
Trigger: AGAAGGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAGATCAACTTCAGGTACTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310298.8
ENST00000339708.9
ENST00000394553.6
ENST00000478717.5
ENST00000485596.5
ENST00000559086.5
ENST00000559742.5
CDS CCA 72 bp CTAAAAGTACCTGAAGTTGATCTTGATGAAATCTCATaGGGCCAAACTGCACATCAGCTACTGCTACCTGTA +
Preference number: 6 (lower is better)
Translates to: LKVPEVDLDEIS*GQTAHQLLLPV
Trigger: TACAGGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAGATCAACTTCAGGTACTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CAA 72 bp GTCAGAACAGACAGTGCATGGTTATTACCTATTCTCTaGAGTTGTGTAACTATGGGCCAGTCTCATACTGGT +
Preference number: 6 (lower is better)
Translates to: VRTDSAWLLPIL*SCVTMGQSHTG
Trigger: ACCAGTATGAGACTGGCCCATAGTTACACAACTCAAGAGAATAGGTAATAACCATGCACTGTCTGTTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS CCA 72 bp CTAAAAGTACCTGAAGTTGATCTTGATGAAATCTCATaGGGCCAAACTGCACATCAGCTACTGCTACTTCTT +
Preference number: 6 (lower is better)
Translates to: LKVPEVDLDEIS*GQTAHQLLLLL
Trigger: AAGAAGTAGCAGTAGCTGATGTGCAGTTTGGCCCCATGAGATTTCATCAAGATCAACTTCAGGTACTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557957.5
CDS GCA 72 bp GAAGACTTAGTGTGTTCTGGTTACTGTGCTAAGGGCTaGACATGTTATTTCACTGAATCTGATAGTAATGTG +
Preference number: 6 (lower is better)
Translates to: EDLVCSGYCAKG*TCYFTESDSNV
Trigger: CACATTACTATCAGATTCAGTGAAATAACATGTGCAGCCCTTAGCACAGTAACCAGAACACACTAAGTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS GCA 72 bp TCTAGTAATTATGGGCCACTGGCTCAGTTTCTGCATTaGTCTGCAATAATTTTATCTCTCAGAAGGCATAAA +
Preference number: 6 (lower is better)
Translates to: SSNYGPLAQFLH*SAIILSLRRHK
Trigger: TTTATGCCTTCTGAGAGATAAAATTATTGCAGAGCAATGCAGAAACTGAGCCAGTGGCCCATAATTACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560789.5
CDS TCA 72 bp TGGCTTTGCCTTTTACTAGCTACATGTGACTTTAAGTaGATTAATCTTCCTCAGCCTCAACTTCTCATTTGT +
Preference number: 6 (lower is better)
Translates to: WLCLLLATCDFK*INLPQPQLLIC
Trigger: ACAAATGAGAAGTTGAGGCTGAGGAAGATTAATTCACTTAAAGTCACATGTAGCTAGTAAAAGGCAAAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560789.5