Pregenerated sensors for PDE6G (Homo sapiens)
Ensembl gene IDs: ENSG00000185527Ensembl transcript IDs: ENST00000331056.10, ENST00000571004.1, ENST00000571224.5, ENST00000574024.1, ENST00000574777.1
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCTGGGAGGAGGGGACGATCTGGGGTCCAGCAGGCTCCCGGGCTaGGGTCCACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCAAGC | + |
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Preference number: 1 (lower is better) Translates to: QLGGGDDLGSSRLPG*GPLPVLPGSGDRPS Trigger: GCTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGGACCCCAGCCCGGGAGCCTGCTGGACCCCAGATCGTCCCCTCCTCCCAGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR TCA 90 bp | TCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGGACTaGGGGGTGGGCCTGTATCTCCAGATGTTGAGCAGGGCCTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SPWEWRPTKPLCGQD*GVGLYLQMLSRAWP Trigger: TGGCCAGGCCCTGCTCAACATCTGGAGATACAGGCCCACCCCTCAGTCCTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR CCA 90 bp | CACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTaGGCAGGACTGAGGGGTGGGCCTGTATCTCCAGATGTTGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: HFPFSLGVETDQASL*AGLRGGPVSPDVEQ Trigger: CTGCTCAACATCTGGAGATACAGGCCCACCCCTCAGTCCTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCCCGGGCTGGGGTCCACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCAGGAGGGGGAGGGTCTaGACTTCAGCAGGGCCTCGT | + |
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Preference number: 2 (lower is better) Translates to: QAPGLGSTSRSPWEWRPTRRGRV*TSAGPR Trigger: ACGAGGCCCTGCTGAAGTCCAGACCCTCCCCCTCCT...GGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGGACCCCAGCCCGGGAGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGCCCTGGAGTCCGAGGAGGGGACGATCTaGGGTCCAGCAGGCTCCCGG | + |
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Preference number: 2 (lower is better) Translates to: PGVMSLGPHLLTVHALESEEGTI*GPAGSR Trigger: CCGGGAGCCTGCTGGACCCCAGATCGTCCCCTCCTC...GGACTCCAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCTCATCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCAGCATGTCCTGTCCAGGTGCCATCTaGGCTAGGGAGGCATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GASSAHRARPGVLLPSMSCPGAI*AREASP Trigger: AGGAGATGCCTCCCTAGCCCAGATGGCACCTGGACA...GGACATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGATGAGGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGCCCTGCCTAGAGGGAGGTGGTaGGCTCCTGGTGACTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: WPPGVMSLGPHLLTVHALPRGRW*APGDWY Trigger: ATACCAGTCACCAGGAGCCCACCACCTCCCTCTAGG...CAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | GAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGACCAAGCCTCTCTGTaGGCAGGACTGAGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: EGWPPGVMSLGPHLLTVHDQASL*AGLRGG Trigger: CCCACCCCTCAGTCCTGCCCACAGAGAGGCTTGGTC...GTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | GAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACCGTTCTCCCTGGGAGTaGAGACCGACCAAGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: EGWPPGVMSLGPHLLTVHRSPWE*RPTKPL Trigger: GAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAACG...GTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCAGCATGTCCAAACTAAGGAGCAGGCTCCCGGGCTaGGGTCCACTTCCCGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SAHRARPGVLLPSMSKLRSRLPG*GPLPVL Trigger: GAGAACGGGAAGTGGACCCCAGCCCGGGAGCCTGCT...CCTTAGTTTGGACATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTAGGAGGGGGAGGGTCTaGACTTCAGCAGGGCCTCGT | + |
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Preference number: 2 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGRRGRV*TSAGPR Trigger: ACGAGGCCCTGCTGAAGTCCAGACCCTCCCCCTCCT...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACACTTCCCGTTCTCCCTaGGAGTGGAGACCGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: EGWPPGVMSLGPHLLTVHTSRSP*EWRPTK Trigger: CTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGT...GTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGGATGCAGAGACGGGGAGCTTCTCTGTATCCCCTTACAGGCAGGACAGGGGGTTTAGAGCACAGTaGGCAGGAGGGGGAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GRDAETGSFSVSPYRQDRGFRAQ*AGGGGS Trigger: AGACCCTCCCCCTCCTGCCCACTGTGCTCTAAACCC...CCTGTCCTGCCTGTAAGGGGATACAGAGAAGCTCCCCGTCTCTGCATCCCTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAAGGAGGGGGAGGGTCTaGACTTCAGCAGGGCCTCGT | + |
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Preference number: 2 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLRRGRV*TSAGPR Trigger: ACGAGGCCCTGCTGAAGTCCAGACCCTCCCCCTCCT...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGGATGCAGAGACGGGGAGCTTCTCTGTATCCCCTTACAGGCAGGACAGGGTTGCAGTCCCATCCTaGTGTCCAGGTGCCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: GRDAETGSFSVSPYRQDRVAVPS*CPGAIW Trigger: CCAGATGGCACCTGGACACCAGGATGGGACTGCAAC...CCTGTCCTGCCTGTAAGGGGATACAGAGAAGCTCCCCGTCTCTGCATCCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCAGCATGTCCAAACTAAGGGTGGTGGGCTCCTGGTaGCTGGTATTAATATGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SAHRARPGVLLPSMSKLRVVGSW*LVLICR Trigger: CCTACATATTAATACCAGTCACCAGGAGCCCACCAC...CCTTAGTTTGGACATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR CCA 72 bp | CAGGCTCCCGGGCTGGGGTCCACTTCCCGTTCTCCCTaGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QAPGLGSTSRSP*EWRPTKPLCGQ Trigger: CTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGGACCCCAGCCCGGGAGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR-3UTR CAA 90 bp | TGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGCCCTGGGGGGAGACCTGAGGTaGCAGTCCCATCCTGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: WPPGVMSLGPHLLTVHALGGDLR*QSHPGV Trigger: GACACCAGGATGGGACTGCAACCTCAGGTCTCCCCC...CAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCA 66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR CCA 72 bp | CTGCAAGGGCAGGCTGTATTGAGAAGGATGGCCCCCTaGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGT | + |
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Preference number: 3 (lower is better) Translates to: LQGQAVLRRMAP*CDELGASSAHR Trigger: ACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTCTCAATACAGCCTGCCCTTGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| 3UTR CCA 72 bp | ATATGTAGGGGGAGACCTGAGGTTGCAGTCCCATCCTaGTGTCCAGGTGCCATCTGGGCTAGGGAGGCATCT | + |
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Preference number: 3 (lower is better) Translates to: ICRGRPEVAVPS*CPGAIWAREAS Trigger: AGATGCCTCCCTAGCCCAGATGGCACCTGGACACCAGGATGGGACTGCAACCTCAGGTCTCCCCCTACATAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | AGGCTCCCGGGCTGGGGTCCACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCACCCCGGCCACCCTGGTaGCTGACCGGAACTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RLPGWGPLPVLPGSGDRPPRPPW*LTGTQP Trigger: AGGCTGAGTTCCGGTCAGCCACCAGGGTGGCCGGGG...TGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGGACCCCAGCCCGGGAGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR TCA 90 bp | GGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGCCCTGGAGTCCTGCGGCCACCCTGGTGGCTaGCCGGAACTCAGCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GVMSLGPHLLTVHALESCGHPGG*PELSLG Trigger: CCCAAGGCTGAGTTCCGGTCAGCCACCAGGGTGGCC...GCAGGACTCCAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | TGGGGCCTCATCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCAGCATGTCCCTGCTGCGGTCAAGTaGAGGGCGGGTCTCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WGLICSPCTPWSPATQHVPAAVK*RAGLRG Trigger: CCCCCTGAGACCCGCCCTGCACTTGACCGCAGCAGG...GACATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGATGAGGCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | CAGGCTCCCGGGCTGGGGTCCACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCCTCATCTGCTCACCGTaGACGCCCTGGAGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QAPGLGSTSRSPWEWRPTLICSP*TPWSPA Trigger: AGCAGGACTCCAGGGCGTGCACGGTGAGCAGATGAG...GGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGGACCCCAGCCCGGGAGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | CCACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGGGAGGAGGGGACGATCTaGGGTCCAGCAGGCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PLPVLPGSGDRPSLSVGREEGTI*GPAGSR Trigger: CCGGGAGCCTGCTGGACCCCAGATCGTCCCCTCCTC...CCTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR TCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTGCCCTTTCCTGGGGGTaGCAGGTCCCCCGGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGALSWG*QVPRPP Trigger: GGGTGGCCGGGGGACCTGTCACCCCCAGGAAAGGGC...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR TCA 90 bp | TGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGCCCTGTGTATCTCCAGATGTTaGGCAGGGCCTGGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: WPPGVMSLGPHLLTVHALCISRC*AGPGQP Trigger: GGGCTGGCCAGGCCCTGCTCAACATCTGGAGATACA...CAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | GAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACTGGACTCCCTCCTGCTaGGGTCAAGTGCAGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: EGWPPGVMSLGPHLLTVHWTPSC*GQVQGG Trigger: CCCGCCCTGCACTTGACCGCAGCAGGAGGGAGTCCA...GTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | GATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCACACCGCGGCAACCTTaGCTCCTGGACTCCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: DELGASSAHRARPGVLLPTPRQP*LLDSLL Trigger: CAGGAGGGAGTCCAGGAGCCAAGGTTGCCGCGGTGT...GGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGCTCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | GATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCGACCAAGCCTCTCTGTaGGCAGGACTGAGGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: DELGASSAHRARPGVLLPDQASL*AGLRGG Trigger: CCCACCCCTCAGTCCTGCCCACAGAGAGGCTTGGTC...GGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGCTCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | TTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGGACTGAGGGGTAGCAGGCTCCCGGGCTaGGGTCCACTTCCCGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSLGVETDQASLWAGLRGSRLPG*GPLPVL Trigger: GAGAACGGGAAGTGGACCCCAGCCCGGGAGCCTGCT...ACCCCTCAGTCCTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | TTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGGACTGAGGGGTGGCAGGACAGGGGGCTaGGGTGCAGAAGCACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FSLGVETDQASLWAGLRGGRTGG*GAEALW Trigger: CCAGAGTGCTTCTGCACCCCAGCCCCCTGTCCTGCC...ACCCCTCAGTCCTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR TCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAGCCCTTTCCTGGGGGTaGCAGGTCCCCCGGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLALSWG*QVPRPP Trigger: GGGTGGCCGGGGGACCTGTCACCCCCAGGAAAGGGC...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTCCCCGGCCACCCTGGTaGCTGACCGGAACTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGPRPPW*LTGTQP Trigger: AGGCTGAGTTCCGGTCAGCCACCAGGGTGGCCGGGG...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CCA 90 bp | CCACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGGCATCCTAGAGGGAGGTaGTGGGCTCCTGGTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: PLPVLPGSGDRPSLSVGRHPRGR*WAPGDW Trigger: CCAGTCACCAGGAGCCCACCACCTCCCTCTAGGATG...CCTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR TCA 90 bp | CCACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGGTCGTCCCCAAACCCTTaGACGCCTTTCTTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: PLPVLPGSGDRPSLSVGRSSPNP*TPFFGG Trigger: GCCCCCAAAGAAAGGCGTTCAAGGGTTTGGGGACGA...CCTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR TCA 90 bp | GCTTTCCAGCTGGGAGGAGGGGACGATCTGGGGTCCAGCAGGCTCCCGGGCTGGGTGGTGGGCTCCTGGTaGCTGGTATTAATATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: AFQLGGGDDLGSSRLPGWVVGSW*LVLICR Trigger: CCTACATATTAATACCAGTCACCAGGAGCCCACCAC...CCAGCCCGGGAGCCTGCTGGACCCCAGATCGTCCCCTCCTCCCAGCTGGAAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | GGAAGGGATGCAGAGACGGGGAGCTTCTCTGTATCCCCTTACAGGCAGGACAGGGGTCTCAGGGGGCTGTaGTGTGAGTGCTGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRDAETGSFSVSPYRQDRGLRGL*CECWAS Trigger: GGAGGCCCAGCACTCACAGCACAGCCCCCTGAGACC...CCTGTCCTGCCTGTAAGGGGATACAGAGAAGCTCCCCGTCTCTGCATCCCTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTGCTTGGGGCCTCATCTaGTCACCGTGCACGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGAWGLI*SPCTPW Trigger: CCAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGC...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | TTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGGACTGAGGGGTGGGTTTAGAGCACAGTaGGCAGGAGGGGGAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FSLGVETDQASLWAGLRGGFRAQ*AGGGGS Trigger: AGACCCTCCCCCTCCTGCCCACTGTGCTCTAAACCC...ACCCCTCAGTCCTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | CCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGCCCTGGAGTCCCCTAGAGGGAGGTGGTaGGCTCCTGGTGACTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: PGVMSLGPHLLTVHALESPRGRW*APGDWY Trigger: ATACCAGTCACCAGGAGCCCACCACCTCCCTCTAGG...GGACTCCAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | TTGAGAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTATGTTGAGCAGGGCCTaGCCAGCCCCTGAGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LRRMAPWCDELGASSAHRMLSRA*PAPEGA Trigger: TGCCCCCTCAGGGGCTGGCCAGGCCCTGCTCAACAT...ACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTCTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR TCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAGGCCACCCTGGTGGCTaGCCGGAACTCAGCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLGHPGG*PELSLG Trigger: CCCAAGGCTGAGTTCCGGTCAGCCACCAGGGTGGCC...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR TCA 90 bp | CTGGTATTAATATGTAGGGGGAGACCTGAGGTTGCAGTCCCATCCTGGTGTCCAGCCCTTTCCTGGGGGTaGCAGGTCCCCCGGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: LVLICRGRPEVAVPSWCPALSWG*QVPRPP Trigger: GGGTGGCCGGGGGACCTGTCACCCCCAGGAAAGGGC...TGGACACCAGGATGGGACTGCAACCTCAGGTCTCCCCCTACATATTAATACCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTCCTGGACTCCCTCCTaGTGCGGTCAAGTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGSWTPS*CGQVQG Trigger: GCCCTGCACTTGACCGCAGCAGGAGGGAGTCCAGGA...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTGGACTCCCTCCTGCTaGGGTCTGTGGCAGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGWTPSC*GLWQVL Trigger: CAGGACCTGCCACAGACCGCAGCAGGAGGGAGTCCA...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571004.1 |
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| CDS-3UTR CCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTACACCGCGGCAACCTTaGCTCCTGGACTCCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGTPRQP*LLDSLL Trigger: CAGGAGGGAGTCCAGGAGCCAAGGTTGCCGCGGTGT...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTACCCCGGCCACCCTGGTaGCTGACCGGAACTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLPRPPW*LTGTQP Trigger: AGGCTGAGTTCCGGTCAGCCACCAGGGTGGCCGGGG...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGCTGTATTGAGAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCGTGCAGCTCCAGGTaGTTGAAGGCCTCCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQAVLRRMAPWCDELGASSCSSR*LKASQG Trigger: CCCTTGGGAGGCCTTCAACCACCTGGAGCTGCACGA...TGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTCTCAATACAGCCTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGCTGTATTGAGAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCAAGAAGGATGGCCCCCTaGTGTGATGAGCTTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQAVLRRMAPWCDELGASRRMAP*CDELGA Trigger: GGCCCCAAGCTCATCACACCAGGGGGCCATCCTTCT...TGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTCTCAATACAGCCTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGCTGTATTGAGAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCAGGGCCTCGTGCTAGATaGTGCCATATTGGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQAVLRRMAPWCDELGASGPRAR*CHIGPA Trigger: AGCTGGCCCAATATGGCATCATCTAGCACGAGGCCC...TGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTCTCAATACAGCCTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR GCA 90 bp | TCACCGTGCACGCCCTGGAGTCCTGCTACCCAGCATGTCCAAACTAAGGGCACCCACGCCCTGGAGTCCTaGTACCCAGCATGTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPCTPWSPATQHVQTKGTHALES*YPACPN Trigger: GTTTGGACATGCTGGGTAGCAGGACTCCAGGGCGTG...GGTGCCCTTAGTTTGGACATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTCGTGCAGCTCCAGGTaGTTGAAGGCCTCCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGSCSSR*LKASQG Trigger: CCCTTGGGAGGCCTTCAACCACCTGGAGCTGCACGA...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CCA 90 bp | CCTCATCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCAGCATGTCCAAACTGTCCAGGTGCCATCTaGGCTAGGGAGGCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHLLTVHALESCYPACPNCPGAI*AREASP Trigger: AGGAGATGCCTCCCTAGCCCAGATGGCACCTGGACA...GTTTGGACATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCAGCATGTCCAAACTAAGGCGTTCTCCCTGGGAGTaGAGACCGACCAAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAHRARPGVLLPSMSKLRRSPWE*RPTKPL Trigger: GAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAACG...CCTTAGTTTGGACATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR TCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTCGTCCCCAAACCCTTaGACGCCTTTCTTTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGSSPNP*TPFFGG Trigger: GCCCCCAAAGAAAGGCGTTCAAGGGTTTGGGGACGA...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGGACTGAGGGGTTGCCTGGTCTGTCGCTaGTTAAATTTAGGGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLGVETDQASLWAGLRGCLVCR*LNLGGP Trigger: AGGGCCCCCTAAATTTAAGCAGCGACAGACCAGGCA...ACCCCTCAGTCCTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR GCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATCCTGGACTCCCTCCTaGTGCGGTCTGTGGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLSWTPS*CGLWQV Trigger: GACCTGCCACAGACCGCAGCAGGAGGGAGTCCAGGA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571004.1 |
||
| CDS-3UTR CCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAACACCGCGGCAACCTTaGCTCCTGGACTCCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLTPRQP*LLDSLL Trigger: CAGGAGGGAGTCCAGGAGCCAAGGTTGCCGCGGTGT...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CCA 90 bp | TCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCAGCATGTCCAAACTAAGGACCGGAACTCAGCCTTaGGCGGTTCCAGGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SAHRARPGVLLPSMSKLRTGTQP*AVPGSW Trigger: CCATGAACCTGGAACCGCCCAAGGCTGAGTTCCGGT...CCTTAGTTTGGACATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTACCGGAACTCAGCCTTaGGCGGTTCCAGGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGTGTQP*AVPGSW Trigger: CCATGAACCTGGAACCGCCCAAGGCTGAGTTCCGGT...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTGTCCAGGTGCCATCTaGGCTAGGGAGGCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGCPGAI*AREASP Trigger: AGGAGATGCCTCCCTAGCCCAGATGGCACCTGGACA...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTACTTCCCGTTCTCCCTaGGAGTGGAGACCGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGTSRSP*EWRPTK Trigger: CTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGT...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATCCTGCTGCGGTCTGTaGCAGGTCCTGAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLSCCGL*QVLSLE Trigger: CTCCAGGCTCAGGACCTGCCACAGACCGCAGCAGGA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571004.1 |
||
| CDS-3UTR CCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAGGGTTTAGAGCACAGTaGGCAGGAGGGGGAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLGFRAQ*AGGGGS Trigger: AGACCCTCCCCCTCCTGCCCACTGTGCTCTAAACCC...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATCACCGTGCACGCCCTaGAGTCCTGCTACCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLSPCTP*SPATQH Trigger: ATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR TCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATTGGGGGCTTGCTCTTaGACTGCCTGGTCTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLLGACS*TAWSVA Trigger: AGCGACAGACCAGGCAGTTCAAGAGCAAGCCCCCAA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR TCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATCGTCCCCAAACCCTTaGACGCCTTTCTTTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLSSPNP*TPFFGG Trigger: GCCCCCAAAGAAAGGCGTTCAAGGGTTTGGGGACGA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR TCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAGGGCCTCGTGCTAGATaGTGCCATATTGGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLGPRAR*CHIGPA Trigger: AGCTGGCCCAATATGGCATCATCTAGCACGAGGCCC...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR TCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAAAGGGCAGGCTGTATTaGGAAGGATGGCCCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLKGRLY*EGWPPG Trigger: ACCAGGGGGCCATCCTTCTCAATACAGCCTGCCCTT...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | TTGAGAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGGCTTGCTCTTGAACTaGCTGGTCTGTCGCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LRRMAPWCDELGASSAHRGLLLN*LVCRCL Trigger: TAAGCAGCGACAGACCAGGCAGTTCAAGAGCAAGCC...ACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTGGCTTGCTCTTGAACTaGCTGGTCTGTCGCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGGLLLN*LVCRCL Trigger: TAAGCAGCGACAGACCAGGCAGTTCAAGAGCAAGCC...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CCA 90 bp | TTAATATGTAGGGGGAGACCTGAGGTTGCAGTCCCATCCTGGTGTCCAGGTGCCGTTGCAGTCCCATCCTaGTGTCCAGGTGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LICRGRPEVAVPSWCPGAVAVPS*CPGAIW Trigger: CCAGATGGCACCTGGACACCAGGATGGGACTGCAAC...GGCACCTGGACACCAGGATGGGACTGCAACCTCAGGTCTCCCCCTACATATTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAGTTGCAGTCCCATCCTaGTGTCCAGGTGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLVAVPS*CPGAIW Trigger: CCAGATGGCACCTGGACACCAGGATGGGACTGCAAC...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331056.10 ENST00000571224.5 |
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| CDS-3UTR CCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAGGCAGGACTGAGGGGTaGGCCTGTATCTCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLGRTEG*ACISRC Trigger: ACATCTGGAGATACAGGCCCACCCCTCAGTCCTGCC...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR GCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATGGACTCCCTCCTGCTaGGGTTTCGGGAATTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLWTPSC*GFGNSC Trigger: GCAAGAATTCCCGAAACCGCAGCAGGAGGGAGTCCA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571224.5 |
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| CDS-3UTR GCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATCCTGGACTCCCTCCTaGTGCGGTTTCGGGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLSWTPS*CGFGNS Trigger: AGAATTCCCGAAACCGCAGCAGGAGGGAGTCCAGGA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571224.5 |
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| CDS-3UTR TCA 90 bp | CTGGTATTAATATGTAGGGGGAGACCTGAGGTTGCAGTCCCATCCTGGTGTCCATTGGGGGCTTGCTCTTaGACTGCCTGGTCTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVLICRGRPEVAVPSWCPLGACS*TAWSVA Trigger: AGCGACAGACCAGGCAGTTCAAGAGCAAGCCCCCAA...TGGACACCAGGATGGGACTGCAACCTCAGGTCTCCCCCTACATATTAATACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR TCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATTCGGGAATTCTTGCTaGGAAAAGTGCGTCGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLFGNSC*EKCVGK Trigger: CTTGCCGACGCACTTTTCTCAGCAAGAATTCCCGAA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571224.5 |
||
| CDS-3UTR CCA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATTGAACGCCTTTCTTTaGGGGCTTGCTCTTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLLNAFL*GLALEL Trigger: CAGTTCAAGAGCAAGCCCCCAAAGAAAGGCGTTCAA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CCA 90 bp | CTGGTATTAATATGTAGGGGGAGACCTGAGGTTGCAGTCCCATCCTGGTGTCCATTGAACGCCTTTCTTTaGGGGCTTGCTCTTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLICRGRPEVAVPSWCPLNAFL*GLALEL Trigger: CAGTTCAAGAGCAAGCCCCCAAAGAAAGGCGTTCAA...TGGACACCAGGATGGGACTGCAACCTCAGGTCTCCCCCTACATATTAATACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS TCA 90 bp | GGGCCCTTTCCTGGGGGTGACAGGTCCCCCGGCCACCCTGGTGGCTaGCCGGAACTCAGCCTTGGGCGGTTCCAGGTTCATGGTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPFPGGDRSPGHPGG*PELSLGRFQVHGEA Trigger: AGCCTCACCATGAACCTGGAACCGCCCAAGGCTGAGTTCCGGTCAGCCACCAGGGTGGCCGGGGGACCTGTCACCCCCAGGAAAGGGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CAA 90 bp | GCTTTCCAGCTGGGAGGAGGGGACGATCTGGGGTCCAGCAGGCTCCCGGGCTGGCAAGGGCAGGCTGTATaGAGAAGGATGGCCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AFQLGGGDDLGSSRLPGWQGQAV*RRMAPW Trigger: CCAGGGGGCCATCCTTCTCAATACAGCCTGCCCTTG...CCAGCCCGGGAGCCTGCTGGACCCCAGATCGTCCCCTCCTCCCAGCTGGAAAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CAA 90 bp | GGGCCTCATCTGCTCACCGTGCACGCCCTGGAGTCCTGCTACCCAGCATGTCCATGCAGCTCCAGGTGGTaGAAGGCCTCCCAAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPHLLTVHALESCYPACPCSSRW*KASQGQ Trigger: CTGCCCTTGGGAGGCCTTCAACCACCTGGAGCTGCA...TGGACATGCTGGGTAGCAGGACTCCAGGGCGTGCACGGTGAGCAGATGAGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CAA 90 bp | TCCACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGGGGGGAGACCTGAGGTaGCAGTCCCATCCTGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: STSRSPWEWRPTKPLCGQGGDLR*QSHPGV Trigger: GACACCAGGATGGGACTGCAACCTCAGGTCTCCCCC...CTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGGA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CAA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTGACACCGCGGCAACCTaGGCTCCTGGACTCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGDTAAT*APGLPP Trigger: AGGAGGGAGTCCAGGAGCCAAGGTTGCCGCGGTGTC...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CAA 90 bp | TGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGCCCTGCTAGATGATGCCATATaGGGCCAGCTCGTGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WPPGVMSLGPHLLTVHALLDDAI*GQLVQL Trigger: GAGCTGCACGAGCTGGCCCAATATGGCATCATCTAG...CAGGGCGTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGATGGCCCCCTGGTGTGATGAGCTTGGGGCCTCATCTGCTCACCGTGCACGTCGTCCCCAAACCCTaGAACGCCTTTCTTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EGWPPGVMSLGPHLLTVHVVPKP*NAFLWG Trigger: CCCCCAAAGAAAGGCGTTCAAGGGTTTGGGGACGAC...GTGCACGGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGGGGGCCATCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331056.10 |
||
| CDS-3UTR CAA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTGCAGCTCCAGGTGGTaGAAGGCCTCCCAAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGCSSRW*KASQGQ Trigger: CTGCCCTTGGGAGGCCTTCAACCACCTGGAGCTGCA...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTGGGGGAGACCTGAGGTaGCAGTCCCATCCTGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGGGDLR*QSHPGV Trigger: GACACCAGGATGGGACTGCAACCTCAGGTCTCCCCC...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000331056.10 ENST00000571224.5 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGATGCAGAGACGGGGAGCTTCTCTGTATCCCCTTACAGGCAGGACAGGGACCGGAACTCAGCCTaGGGCGGTTCCAGGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: GRDAETGSFSVSPYRQDRDRNSA*GGSRFM Trigger: CATGAACCTGGAACCGCCCAAGGCTGAGTTCCGGTC...CCTGTCCTGCCTGTAAGGGGATACAGAGAAGCTCCCCGTCTCTGCATCCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CAA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTGACCGGAACTCAGCCTaGGGCGGTTCCAGGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGDRNSA*GGSRFM Trigger: CATGAACCTGGAACCGCCCAAGGCTGAGTTCCGGTC...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CAA 90 bp | TCCACTTCCCGTTCTCCCTGGGAGTGGAGACCGACCAAGCCTCTCTGTGGGCAGCCTTTCTTTGGGGGCTaGCTCTTGAACTGCCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: STSRSPWEWRPTKPLCGQPFFGG*LLNCLV Trigger: GACCAGGCAGTTCAAGAGCAAGCCCCCAAAGAAAGG...CTGCCCACAGAGAGGCTTGGTCGGTCTCCACTCCCAGGGAGAACGGGAAGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CAA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTATGCAGCTCCAGGTGGTaGAAGGCCTCCCAAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLCSSRW*KASQGQ Trigger: CTGCCCTTGGGAGGCCTTCAACCACCTGGAGCTGCA...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CAA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAGACCGGAACTCAGCCTaGGGCGGTTCCAGGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLDRNSA*GGSRFM Trigger: CATGAACCTGGAACCGCCCAAGGCTGAGTTCCGGTC...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CAA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTCCTTTCTTTGGGGGCTaGCTCTTGAACTGCCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGPFFGG*LLNCLV Trigger: GACCAGGCAGTTCAAGAGCAAGCCCCCAAAGAAAGG...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CAA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTCTAGATGATGCCATATaGGGCCAGCTCGTGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGLDDAI*GQLVQL Trigger: GAGCTGCACGAGCTGGCCCAATATGGCATCATCTAG...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CAA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTACCTGGTGTGATGAGCTaGGGGCCTCATCTGCTCACC | + |
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Preference number: 5 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLPGVMS*GPHLLT Trigger: GGTGAGCAGATGAGGCCCCAAGCTCATCACACCAGG...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS-3UTR CAA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTAGTCGTCCCCAAACCCTaGAACGCCTTTCTTTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLVVPKP*NAFLWG Trigger: CCCCCAAAGAAAGGCGTTCAAGGGTTTGGGGACGAC...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CAA 90 bp | CAGGTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTCGGTTTCGGGAATTCTaGCTGAGAAAAGTGCGTCGG | + |
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Preference number: 5 (lower is better) Translates to: QVPSGLGRHLLNRNPEQGRFREF*LRKVRR Trigger: CCGACGCACTTTTCTCAGCAAGAATTCCCGAAACCG...ACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571224.5 |
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| CDS-3UTR CAA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTACCTTTCTTTGGGGGCTaGCTCTTGAACTGCCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLPFFGG*LLNCLV Trigger: GACCAGGCAGTTCAAGAGCAAGCCCCCAAAGAAAGG...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CAA 90 bp | GTGCCATCTGGGCTAGGGAGGCATCTCCTCAACAGGAATCCTGAGCAGGGTTTACTAGATGATGCCATATaGGGCCAGCTCGTGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: VPSGLGRHLLNRNPEQGLLDDAI*GQLVQL Trigger: GAGCTGCACGAGCTGGCCCAATATGGCATCATCTAG...TAAACCCTGCTCAGGATTCCTGTTGAGGAGATGCCTCCCTAGCCCAGATGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS-3UTR CAA 90 bp | CTGGTATTAATATGTAGGGGGAGACCTGAGGTTGCAGTCCCATCCTGGTGTCCATTTGGGGGCTTGCTCTaGAACTGCCTGGTCTGTCGC | + |
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Preference number: 5 (lower is better) Translates to: LVLICRGRPEVAVPSWCPFGGLL*NCLVCR Trigger: GCGACAGACCAGGCAGTTCAAGAGCAAGCCCCCAAA...TGGACACCAGGATGGGACTGCAACCTCAGGTCTCCCCCTACATATTAATACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS TCA 72 bp | CCTGGGGGTGACAGGTCCCCCGGCCACCCTGGTGGCTaGCCGGAACTCAGCCTTGGGCGGTTCCAGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PGGDRSPGHPGG*PELSLGRFQVH Trigger: ATGAACCTGGAACCGCCCAAGGCTGAGTTCCGGTCAGCCACCAGGGTGGCCGGGGGACCTGTCACCCCCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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| CDS CAA 90 bp | CGGTTCCAGGTTCATGGTGAGGCTGACGGAGACACCGCGGCAACCTaGGCTCCTGGACTCCCTCCTGCTGCGGTCAAGTGCAGGGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: RFQVHGEADGDTAAT*APGLPPAAVKCRAG Trigger: ACCCGCCCTGCACTTGACCGCAGCAGGAGGGAGTCCAGGAGCCAAGGTTGCCGCGGTGTCTCCGTCAGCCTCACCATGAACCTGGAACCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS CAA 72 bp | GTTCATGGTGAGGCTGACGGAGACACCGCGGCAACCTaGGCTCCTGGACTCCCTCCTGCTGCGGTCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: VHGEADGDTAAT*APGLPPAAVCG Trigger: GCCACAGACCGCAGCAGGAGGGAGTCCAGGAGCCAAGGTTGCCGCGGTGTCTCCGTCAGCCTCACCATGAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571004.1 |
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| CDS CAA 72 bp | GTTCATGGTGAGGCTGACGGAGACACCGCGGCAACCTaGGCTCCTGGACTCCCTCCTGCTGCGGTCAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: VHGEADGDTAAT*APGLPPAAVKC Trigger: GCACTTGACCGCAGCAGGAGGGAGTCCAGGAGCCAAGGTTGCCGCGGTGTCTCCGTCAGCCTCACCATGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331056.10 |
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| CDS CAA 72 bp | GTTCATGGTGAGGCTGACGGAGACACCGCGGCAACCTaGGCTCCTGGACTCCCTCCTGCTGCGGTTTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: VHGEADGDTAAT*APGLPPAAVSG Trigger: TCCCGAAACCGCAGCAGGAGGGAGTCCAGGAGCCAAGGTTGCCGCGGTGTCTCCGTCAGCCTCACCATGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571224.5 |
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| CDS CAA 90 bp | CGGTTCCAGGTTCATGGTGAGGCTGACGGAGACACCGCGGCAACCTaGGCTCCTGGACTCCCTCCTGCTGCGGTTTCGGGAATTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: RFQVHGEADGDTAAT*APGLPPAAVSGILA Trigger: AGCAAGAATTCCCGAAACCGCAGCAGGAGGGAGTCCAGGAGCCAAGGTTGCCGCGGTGTCTCCGTCAGCCTCACCATGAACCTGGAACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571224.5 |
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| CDS TCA 72 bp | GGGAGGGTCTGGACTTCAGCAGGGCCTCGTGCTAGATaGTGCCATATTGGGCCAGCTCGTGCAGCTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GRVWTSAGPRAR*CHIGPARAAPG Trigger: ACCTGGAGCTGCACGAGCTGGCCCAATATGGCATCATCTAGCACGAGGCCCTGCTGAAGTCCAGACCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 ENST00000574024.1 ENST00000574777.1 |
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| CDS CAA 72 bp | CTCCTGGACTCCCTCCTGCTGCGGTTTCGGGAATTCTaGCTGAGAAAAGTGCGTCGGCAAGGCCGCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLDSLLLRFREF*LRKVRRQGRPA Trigger: TGCTGGGCGGCCTTGCCGACGCACTTTTCTCAGCAAGAATTCCCGAAACCGCAGCAGGAGGGAGTCCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571224.5 |
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| CDS TCA 72 bp | TGGACTCCCTCCTGCTGCGGTTTCGGGAATTCTTGCTaGGAAAAGTGCGTCGGCAAGGCCGCCCAGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: WTPSCCGFGNSC*EKCVGKAAQQR Trigger: TCTCTGCTGGGCGGCCTTGCCGACGCACTTTTCTCAGCAAGAATTCCCGAAACCGCAGCAGGAGGGAGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571224.5 |
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| CDS CCA 72 bp | AGGGATGTCGTCCCCAAACCCTTGAACGCCTTTCTTTaGGGGCTTGCTCTTGAACTGCCTGGTCTGTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: RDVVPKPLNAFL*GLALELPGLSL Trigger: CAGCGACAGACCAGGCAGTTCAAGAGCAAGCCCCCAAAGAAAGGCGTTCAAGGGTTTGGGGACGACATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000331056.10 ENST00000571004.1 ENST00000571224.5 |
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