Pregenerated sensors for PDE6D (Homo sapiens)
Ensembl gene IDs: ENSG00000156973Ensembl transcript IDs: ENST00000287600.9, ENST00000409772.5, ENST00000428104.2, ENST00000477748.1, ENST00000486044.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCTGTGTGTATGCTGGGAAGGACTTGAGACCTGTCCCCTGCCCTaGTCTGGGGTTGGGAGTTTAGTCTGGTCAGCTGGAAGATGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SLCVCWEGLETCPLP*SGVGSLVWSAGRWW Trigger: CCACCATCTTCCAGCTGACCAGACTAAACTCCCAACCCCAGACCAGGGCAGGGGACAGGTCTCAAGTCCTTCCCAGCATACACACAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| 3UTR GCA 90 bp | AGGTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATaGTGGGAAGGACTTGAGACCTGTCCCCTGCCCTGGTCTGGGGTT | + |
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Preference number: 1 (lower is better) Translates to: RYSYRFVVCVCSLCV*WEGLETCPLPWSGV Trigger: AACCCCAGACCAGGGCAGGGGACAGGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCTGCCCTGGTCTGGGGTTGGGAGTTTAGTCTGGTCAGCTGGAAGATGGGAGCTGGTCCCCTGGTaGCTGCAGGTAGGTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CPLPWSGVGSLVWSAGRWELVPW*LQVGSA Trigger: AGCAGAACCTACCTGCAGCCACCAGGGGACCAGCTC...CCATCTTCCAGCTGACCAGACTAAACTCCCAACCCCAGACCAGGGCAGGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| 3UTR-3UTR CCA 90 bp | GTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACAGAGCTGGTCCCCTaGTGGCTGCAGGTAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VQLPVCGMCLFPVCMLGRTELVP*WLQVGS Trigger: AGAACCTACCTGCAGCCACCAGGGGACCAGCTCTGT...CCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| 3UTR-3UTR CCA 90 bp | GGTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGACCTGTCCCCTGCCCTaGTCTGGGGTTGGGAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: GTVTGLWYVFVPCVYAGKTCPLP*SGVGSL Trigger: TAAACTCCCAACCCCAGACCAGGGCAGGGGACAGGT...CTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| 3UTR-3UTR CCA 90 bp | ACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGAGTTGGGAGTTTAGTCTaGTCAGCTGGAAGATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: TGLWYVFVPCVYAGKDLRVGSLV*SAGRWW Trigger: CCACCATCTTCCAGCTGACCAGACTAAACTCCCAAC...TCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| 3UTR CCA 72 bp | GTATGCTGGGAAGGACTTGAGACCTGTCCCCTGCCCTaGTCTGGGGTTGGGAGTTTAGTCTGGTCAGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: VCWEGLETCPLP*SGVGSLVWSAG Trigger: TCCAGCTGACCAGACTAAACTCCCAACCCCAGACCAGGGCAGGGGACAGGTCTCAAGTCCTTCCCAGCATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| 3UTR CCA 72 bp | CGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTaGGAAGGACTTGAGACCTGTCCCCTGCCCTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: RFVVCVCSLCVC*EGLETCPLPWS Trigger: AGACCAGGGCAGGGGACAGGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR TCA 90 bp | GTCCCCTGGTGGCTGCAGGTAGGTTCTGCTGTTGAGGGAATTAGGGGTGTATGTCCGCTCGTCCTTGGCTaGCATGATGCGGCGGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: VPWWLQVGSAVEGIRGVCPLVLG*HDAAVA Trigger: GGCGACCGCCGCATCATGTCAGCCAAGGACGAGCGG...ACATACACCCCTAATTCCCTCAACAGCAGAACCTACCTGCAGCCACCAGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287600.9 ENST00000409772.5 |
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| CDS-3UTR GCA 90 bp | TGTCCCCTGCCCTGGTCTGGGGTTGGGAGTTTAGTCTGGTCAGCTGGAAGATGGGGAACACGGGCTTCATaGTCCACACCAGGGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: CPLPWSGVGSLVWSAGRWGTRAS*STPGTD Trigger: GTCTGTCCCTGGTGTGGAGCATGAAGCCCGTGTTCC...CCATCTTCCAGCTGACCAGACTAAACTCCCAACCCCAGACCAGGGCAGGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR GCA 90 bp | TGTCCCCTGCCCTGGTCTGGGGTTGGGAGTTTAGTCTGGTCAGCTGGAAGATGGCTGGGACTCGGGTGCTaGCTCTATCAAGGACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CPLPWSGVGSLVWSAGRWLGLGC*LYQGLP Trigger: TGGCAGTCCTTGATAGAGGCAGCACCCGAGTCCCAG...CCATCTTCCAGCTGACCAGACTAAACTCCCAACCCCAGACCAGGGCAGGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | GTCCCCTGGTGGCTGCAGGTAGGTTCTGCTGTTGAGGGAATTAGGGGTGTATGTGCGGCTTTCTCACTCTaGTCGGCGGAGCCTCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VPWWLQVGSAVEGIRGVCAAFSL*SAEPRR Trigger: TCTGCGAGGCTCCGCCGACCAGAGTGAGAAAGCCGC...ACATACACCCCTAATTCCCTCAACAGCAGAACCTACCTGCAGCCACCAGGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287600.9 ENST00000409772.5 |
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| CDS-3UTR TCA 90 bp | GTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGCGTCCTTGGCTGACATaGTGCGGCGGTCGCCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: VQLPVCGMCLFPVCMLGRRPWLT*CGGRRP Trigger: CGGGCGGCGACCGCCGCATCATGTCAGCCAAGGACG...CCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | ACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGACCCAGGAGCCGAGGATaGAGCCGCAGCCCGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TGLWYVFVPCVYAGKDLRPRSRG*SRSPAW Trigger: CCAAGCCGGGCTGCGGCTCCATCCTCGGCTCCTGGG...TCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR TCA 90 bp | ACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGACCGCTCGTCCTTGGCTaGCATGATGCGGCGGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: TGLWYVFVPCVYAGKDLRPLVLG*HDAAVA Trigger: GGCGACCGCCGCATCATGTCAGCCAAGGACGAGCGG...TCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | GGTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGAGCCGCAGCCCGGCTTaGAGACCTCGGGCTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GTVTGLWYVFVPCVYAGKSRSPA*RPRASS Trigger: GCTGCTAGCCCGAGGTCTCCAAGCCGGGCTGCGGCT...CTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR GCA 90 bp | ACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGAGAGCCTCGCAGACGGTaGCCAGGAGCCGAGGATGGA | + |
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Preference number: 4 (lower is better) Translates to: TGLWYVFVPCVYAGKDLREPRRR*PGAEDG Trigger: TCCATCCTCGGCTCCTGGGCACCGTCTGCGAGGCTC...TCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR GCA 90 bp | GTCCCCTGGTGGCTGCAGGTAGGTTCTGCTGTTGAGGGAATTAGGGGTGTATGTCATCTGGGACTCGGGTaGTGCCTCTATCAAGGACTG | + |
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Preference number: 4 (lower is better) Translates to: VPWWLQVGSAVEGIRGVCHLGLG*CLYQGL Trigger: CAGTCCTTGATAGAGGCAGCACCCGAGTCCCAGATG...ACATACACCCCTAATTCCCTCAACAGCAGAACCTACCTGCAGCCACCAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR GCA 90 bp | GAGACAAGGAGGGTGACAGGTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTTGAGACCTGTCCCCTaGCCTGGTCTGGGGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ETRRVTGTVTGLWYVFVPLRPVP*PGLGLG Trigger: TCCCAACCCCAGACCAGGGCAGGGGACAGGTCTCAA...GGGAACAAACACATACCACAAACCGGTAACTGTACCTGTCACCCTCCTTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR TCA 90 bp | CTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCGTCCGTCCTTGGCTGACATaGTGCGGCGGTCGCCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LSNIEKSHSGCAYKKIVVRPWLT*CGGRRP Trigger: CGGGCGGCGACCGCCGCATCATGTCAGCCAAGGACG...GACGACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS-3UTR TCA 90 bp | ACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGAATGCTGGGAAGGACTTaGGACCTGTCCCCTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: TGLWYVFVPCVYAGKDLRMLGRT*DLSPAL Trigger: CAGGGCAGGGGACAGGTCTCAAGTCCTTCCCAGCAT...TCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | GTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGGAGCTGGTCCCCTGGTaGCTGCAGGTAGGTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VQLPVCGMCLFPVCMLGRELVPW*LQVGSA Trigger: AGCAGAACCTACCTGCAGCCACCAGGGGACCAGCTC...CCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | GTCCCCTGGTGGCTGCAGGTAGGTTCTGCTGTTGAGGGAATTAGGGGTGTATGTGTTGGGAGTTTAGTCTaGTCAGCTGGAAGATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VPWWLQVGSAVEGIRGVCVGSLV*SAGRWW Trigger: CCACCATCTTCCAGCTGACCAGACTAAACTCCCAAC...ACATACACCCCTAATTCCCTCAACAGCAGAACCTACCTGCAGCCACCAGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | CGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGACCACCTGTCCCCTGCCCTaGTCTGGGGTTGGGAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: RFVVCVCSLCVCWEGLETTCPLP*SGVGSL Trigger: TAAACTCCCAACCCCAGACCAGGGCAGGGGACAGGT...GGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR TCA 90 bp | GTCCCCTGGTGGCTGCAGGTAGGTTCTGCTGTTGAGGGAATTAGGGGTGTATGTACACTGCCTTGCACTTaGGGATTTTCTTGGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: VPWWLQVGSAVEGIRGVCTLPCT*GFSWEH Trigger: GTGTTCCCAAGAAAATCCTCAAGTGCAAGGCAGTGT...ACATACACCCCTAATTCCCTCAACAGCAGAACCTACCTGCAGCCACCAGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000287600.9 ENST00000409772.5 |
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| CDS-3UTR CCA 90 bp | CTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCGTCAGCCGCAGCCCGGCTTaGAGACCTCGGGCTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSNIEKSHSGCAYKKIVVSRSPA*RPRASS Trigger: GCTGCTAGCCCGAGGTCTCCAAGCCGGGCTGCGGCT...GACGACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS-3UTR CCA 90 bp | CTTCTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCCCCAGGAGCCGAGGATaGAGCCGCAGCCCGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLSNIEKSHSGCAYKKIVPRSRG*SRSPAW Trigger: CCAAGCCGGGCTGCGGCTCCATCCTCGGCTCCTGGG...GACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS-3UTR CCA 90 bp | GTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGCTTGCTGGCATCATCTaGGACTCGGGTGCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VQLPVCGMCLFPVCMLGRLAGII*DSGAAS Trigger: AGAGGCAGCACCCGAGTCCCAGATGATGCCAGCAAG...CCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR GCA 90 bp | CTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCGTCGAGCCTCGCAGACGGTaGCCAGGAGCCGAGGATGGA | + |
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Preference number: 4 (lower is better) Translates to: LSNIEKSHSGCAYKKIVVEPRRR*PGAEDG Trigger: TCCATCCTCGGCTCCTGGGCACCGTCTGCGAGGCTC...GACGACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS-3UTR GCA 90 bp | CGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGACCTGTTCCCTGTGTGTATaGTGGGAAGGACTTGAGACC | + |
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Preference number: 4 (lower is better) Translates to: RFVVCVCSLCVCWEGLETCSLCV*WEGLET Trigger: GGTCTCAAGTCCTTCCCAGCATACACACAGGGAACA...GGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | GTCCCCTGGTGGCTGCAGGTAGGTTCTGCTGTTGAGGGAATTAGGGGTGTATGTACAGTTACCGGTTTGTaGTATGTGTTTGTTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: VPWWLQVGSAVEGIRGVCTVTGL*YVFVPC Trigger: ACAGGGAACAAACACATACCACAAACCGGTAACTGT...ACATACACCCCTAATTCCCTCAACAGCAGAACCTACCTGCAGCCACCAGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR TCA 90 bp | CGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGACCTCATCCAATTTAGTTTaGAGCCCCTCAGGATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RFVVCVCSLCVCWEGLETSSNLV*SPSGSP Trigger: GGGAGATCCTGAGGGGCTTCAAACTAAATTGGATGA...GGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | GTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGTCCCTGTGTGTATGCTaGGAAGGACTTGAGACCTGT | + |
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Preference number: 4 (lower is better) Translates to: VQLPVCGMCLFPVCMLGRSLCVC*EGLETC Trigger: ACAGGTCTCAAGTCCTTCCCAGCATACACACAGGGA...CCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR GCA 90 bp | ACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGAAGGTCTTCTGTTCCTTaGCAGAGTATCTTCCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: TGLWYVFVPCVYAGKDLRRSSVP*QSIFPV Trigger: GACAGGGAAGATACTCTGGCAAGGAACAGAAGACCT...TCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR GCA 90 bp | CGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGACCGTCTCACTCTGGATGTaGTTACAAGAAGATCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: RFVVCVCSLCVCWEGLETVSLWM*LQEDRR Trigger: ACGACGATCTTCTTGTAAGCACATCCAGAGTGAGAC...GGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | GTCCCCTGGTGGCTGCAGGTAGGTTCTGCTGTTGAGGGAATTAGGGGTGTATGTAGAAAAGTCTCACTCTaGATGTGCTTACAAGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: VPWWLQVGSAVEGIRGVCRKVSL*MCLQED Trigger: ATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCT...ACATACACCCCTAATTCCCTCAACAGCAGAACCTACCTGCAGCCACCAGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000287600.9 ENST00000409772.5 |
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| CDS-3UTR GCA 90 bp | CGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGACCAAGTTCTCGAGACACTaGCTTGCACTTGAGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: RFVVCVCSLCVCWEGLETKFSRH*LALEDF Trigger: AAAATCCTCAAGTGCAAGGCAGTGTCTCGAGAACTT...GGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR GCA 90 bp | GGTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGCCTCTATCAAGGACTaGCAGGTATTTGTGGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: GTVTGLWYVFVPCVYAGKASIKD*QVFVEL Trigger: TAACTCCACAAATACCTGGCAGTCCTTGATAGAGGC...CTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CCA 90 bp | GGTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGAGAAAAGTCTCACTCTaGATGTGCTTACAAGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: GTVTGLWYVFVPCVYAGKRKVSL*MCLQED Trigger: ATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCT...CTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR GCA 90 bp | CTTCTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCAGGTCTTCTGTTCCTTaGCAGAGTATCTTCCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLSNIEKSHSGCAYKKIVRSSVP*QSIFPV Trigger: GACAGGGAAGATACTCTGGCAAGGAACAGAAGACCT...GACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS-3UTR GCA 90 bp | CTTCTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCGTCTCACTCTGGATGTaGTTACAAGAAGATCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LLSNIEKSHSGCAYKKIVVSLWM*LQEDRR Trigger: ACGACGATCTTCTTGTAAGCACATCCAGAGTGAGAC...GACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS-3UTR GCA 90 bp | CTTCTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCAAGTTCTCGAGACACTaGCTTGCACTTGAGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: LLSNIEKSHSGCAYKKIVKFSRH*LALEDF Trigger: AAAATCCTCAAGTGCAAGGCAGTGTCTCGAGAACTT...GACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS CCA 90 bp | TCGCAGACGGTGCCCAGGAGCCGAGGATGGAGCCGCAGCCCGGCTTaGAGACCTCGGGCTAGCAGCCGCAGCGGCCAGACCAGGACCGGC | + |
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Preference number: 5 (lower is better) Translates to: SQTVPRSRGWSRSPA*RPRASSRSGQTRTG Trigger: GCCGGTCCTGGTCTGGCCGCTGCGGCTGCTAGCCCGAGGTCTCCAAGCCGGGCTGCGGCTCCATCCTCGGCTCCTGGGCACCGTCTGCGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000477748.1 ENST00000486044.1 |
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| CDS GCA 90 bp | CCGCCCGCGGCTTTCTCACTCTGGTCGGCGGAGCCTCGCAGACGGTaGCCAGGAGCCGAGGATGGAGCCGCAGCCCGGCTTGGAGACCTC | + |
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Preference number: 5 (lower is better) Translates to: PPAAFSLWSAEPRRR*PGAEDGAAARLGDL Trigger: GAGGTCTCCAAGCCGGGCTGCGGCTCCATCCTCGGCTCCTGGGCACCGTCTGCGAGGCTCCGCCGACCAGAGTGAGAAAGCCGCGGGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000477748.1 ENST00000486044.1 |
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| CDS CCA 90 bp | TTGGCTGACATGATGCGGCGGTCGCCGCCCGCGGCTTTCTCACTCTaGTCGGCGGAGCCTCGCAGACGGTGCCCAGGAGCCGAGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: LADMMRRSPPAAFSL*SAEPRRRCPGAEDG Trigger: TCCATCCTCGGCTCCTGGGCACCGTCTGCGAGGCTCCGCCGACCAGAGTGAGAAAGCCGCGGGCGGCGACCGCCGCATCATGTCAGCCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000477748.1 ENST00000486044.1 |
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| CDS CCA 90 bp | CATGGGGAGCTCCTGAGAGAGAAAGCACAGCCTAAGGGGAGGATTTaGGGCCCGGGATGGCGATGGCGACGGTTGGGCTGCAGTACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: HGELLREKAQPKGRI*GPGWRWRRLGCSTV Trigger: GACGGTACTGCAGCCCAACCGTCGCCATCGCCATCCCGGGCCCCAAATCCTCCCCTTAGGCTGTGCTTTCTCTCTCAGGAGCTCCCCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428104.2 |
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| CDS-3UTR CAA 90 bp | GGTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGCTGGCCCGCTCGTCCTaGGCTGACATGATGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GTVTGLWYVFVPCVYAGKLARSS*ADMMRR Trigger: CCGCCGCATCATGTCAGCCAAGGACGAGCGGGCCAG...CTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS GCA 90 bp | CGGGCTTCATGCTCCACACCAGGGACAGACAGGTCTTCTGTTCCTTaGCAGAGTATCTTCCCTGTCTCAGCATCCCGAAGGTTCATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RASCSTPGTDRSSVP*QSIFPVSASRRFIQ Trigger: TTGGATGAACCTTCGGGATGCTGAGACAGGGAAGATACTCTGGCAAGGAACAGAAGACCTGTCTGTCCCTGGTGTGGAGCATGAAGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000428104.2 ENST00000486044.1 |
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| CDS GCA 90 bp | CTTGCTGGCATCATCTGGGACTCGGGTGCTGCCTCTATCAAGGACTaGCAGGTATTTGTGGAGTTAGGGATCACAAAGCCAAACTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LAGIIWDSGAASIKD*QVFVELGITKPNSK Trigger: CTTCGAGTTTGGCTTTGTGATCCCTAACTCCACAAATACCTGGCAGTCCTTGATAGAGGCAGCACCCGAGTCCCAGATGATGCCAGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287600.9 ENST00000428104.2 |
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| CDS GCA 90 bp | GCTCATAGCAGCTTCCTCCATGATCATATCACAATACAACGTCAGTaGCTAAACCAGGCACCACCATCCACGCTCCCAGTGTCAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: AHSSFLHDHITIQRQ*LNQAPPSTLPVSET Trigger: GGTCTCTGACACTGGGAGCGTGGATGGTGGTGCCTGGTTTAGGCACTGACGTTGTATTGTGATATGATCATGGAGGAAGCTGCTATGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486044.1 |
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| CDS-3UTR CAA 90 bp | GTCCCCTGGTGGCTGCAGGTAGGTTCTGCTGTTGAGGGAATTAGGGGTGTATGTTCTCGAGACACTGCCTaGCACTTGAGGATTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPWWLQVGSAVEGIRGVCSRDTA*HLRIFL Trigger: CAAGAAAATCCTCAAGTGCAAGGCAGTGTCTCGAGA...ACATACACCCCTAATTCCCTCAACAGCAGAACCTACCTGCAGCCACCAGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000287600.9 ENST00000409772.5 |
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| CDS-3UTR CAA 90 bp | CTTCTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCCTGGCCCGCTCGTCCTaGGCTGACATGATGCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSNIEKSHSGCAYKKIVLARSS*ADMMRR Trigger: CCGCCGCATCATGTCAGCCAAGGACGAGCGGGCCAG...GACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS TCA 90 bp | AGGCTACCAGAGGATGAGCACGCCACTGCTCTCATGCTAACTTTTTaGTGTGGCTGCTTCCCTTGTGCTTCAGGATTTAATCAGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLPEDEHATALMLTF*CGCFPCASGFNQLR Trigger: CCTGAGCTGATTAAATCCTGAAGCACAAGGGAAGCAGCCACATCAAAAAGTTAGCATGAGAGCAGTGGCGTGCTCATCCTCTGGTAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477748.1 |
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| CDS CCA 90 bp | GTTTCTATGATAACGTTCCCAGTTAAGACGCTTGCTGGCATCATCTaGGACTCGGGTGCTGCCTCTATCAAGGACTGCCAGGTATTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSMITFPVKTLAGII*DSGAASIKDCQVFV Trigger: CACAAATACCTGGCAGTCCTTGATAGAGGCAGCACCCGAGTCCCAGATGATGCCAGCAAGCGTCTTAACTGGGAACGTTATCATAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CAA 90 bp | GTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGTCCCAGTTAAGACGCTaGCTGGCATCATCTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: VQLPVCGMCLFPVCMLGRSQLRR*LASSGT Trigger: AGTCCCAGATGATGCCAGCAAGCGTCTTAACTGGGA...CCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CAA 90 bp | GTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGCACTTGAGGATTTTCTaGGGAACACGGGCTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: VQLPVCGMCLFPVCMLGRHLRIF*GTRASC Trigger: GCATGAAGCCCGTGTTCCCAAGAAAATCCTCAAGTG...CCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CAA 90 bp | CGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGACCTTCATCCAATTTAGTTaGAAGCCCCTCAGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFVVCVCSLCVCWEGLETFIQFS*KPLRIS Trigger: GGAGATCCTGAGGGGCTTCAAACTAAATTGGATGAA...GGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CAA 90 bp | GGTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACACTGCCTTGCACTaGAGGATTTTCTTGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: GTVTGLWYVFVPCVYAGKDTALH*RIFLGT Trigger: TGTTCCCAAGAAAATCCTCAAGTGCAAGGCAGTGTC...CTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CAA 90 bp | CGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGACTTGAGACCGTTTGTGGTATGTGTTaGTTCCCTGTGTGTATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RFVVCVCSLCVCWEGLETVCGMC*FPVCML Trigger: CAGCATACACACAGGGAACAAACACATACCACAAAC...GGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS-3UTR CAA 90 bp | GTACAGTTACCGGTTTGTGGTATGTGTTTGTTCCCTGTGTGTATGCTGGGAAGGGGTACAGTTACCGGTTaGTGGTATGTGTTTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VQLPVCGMCLFPVCMLGRGTVTG*WYVFVP Trigger: GGGAACAAACACATACCACAAACCGGTAACTGTACC...CCTTCCCAGCATACACACAGGGAACAAACACATACCACAAACCGGTAACTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS TCA 90 bp | TTTTCTCTCTTACTCCACAAATGCCCAGTAAAGGCTACCAGAGGATaGGCACGCCACTGCTCTCATGCTAACTTTTTGATGTGGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FSLLLHKCPVKATRG*ARHCSHANFLMWLL Trigger: AAGCAGCCACATCAAAAAGTTAGCATGAGAGCAGTGGCGTGCTCATCCTCTGGTAGCCTTTACTGGGCATTTGTGGAGTAAGAGAGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477748.1 |
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| CDS-3UTR CAA 90 bp | CTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCGTCTTCATCCAATTTAGTTaGAAGCCCCTCAGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSNIEKSHSGCAYKKIVVFIQFS*KPLRIS Trigger: GGAGATCCTGAGGGGCTTCAAACTAAATTGGATGAA...GACGACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS-3UTR CAA 90 bp | CTTCTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCGACACTGCCTTGCACTaGAGGATTTTCTTGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LLSNIEKSHSGCAYKKIVDTALH*RIFLGT Trigger: TGTTCCCAAGAAAATCCTCAAGTGCAAGGCAGTGTC...GACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS-3UTR CAA 90 bp | CTTCTTTCAAACATAGAAAAGTCTCACTCTGGATGTGCTTACAAGAAGATCGTCTCTCGAGACACTGCCTaGCACTTGAGGATTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSNIEKSHSGCAYKKIVSRDTA*HLRIFL Trigger: CAAGAAAATCCTCAAGTGCAAGGCAGTGTCTCGAGA...GACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTATGTTTGAAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409772.5 |
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| CDS CCA 72 bp | GGCGGAGCCTCGCAGACGGTGCCCAGGAGCCGAGGATaGAGCCGCAGCCCGGCTTGGAGACCTCGGGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGASQTVPRSRG*SRSPAWRPRAS Trigger: GCTAGCCCGAGGTCTCCAAGCCGGGCTGCGGCTCCATCCTCGGCTCCTGGGCACCGTCTGCGAGGCTCCGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000477748.1 ENST00000486044.1 |
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| CDS CCA 72 bp | ATGATGCGGCGGTCGCCGCCCGCGGCTTTCTCACTCTaGTCGGCGGAGCCTCGCAGACGGTGCCCAGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: MMRRSPPAAFSL*SAEPRRRCPGA Trigger: GGCTCCTGGGCACCGTCTGCGAGGCTCCGCCGACCAGAGTGAGAAAGCCGCGGGCGGCGACCGCCGCATCAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000477748.1 ENST00000486044.1 |
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| CDS GCA 72 bp | GCTTTCTCACTCTGGTCGGCGGAGCCTCGCAGACGGTaGCCAGGAGCCGAGGATGGAGCCGCAGCCCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: AFSLWSAEPRRR*PGAEDGAAARL Trigger: AAGCCGGGCTGCGGCTCCATCCTCGGCTCCTGGGCACCGTCTGCGAGGCTCCGCCGACCAGAGTGAGAAAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000477748.1 ENST00000486044.1 |
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| CDS TCA 72 bp | TCAGGATCTCCCTGGCCCGCTCGTCCTTGGCTGACATaGTGCGGCGGTCGCCGCCCGCGGCTTTCTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGSPWPARPWLT*CGGRRPRLSHS Trigger: AGAGTGAGAAAGCCGCGGGCGGCGACCGCCGCATCATGTCAGCCAAGGACGAGCGGGCCAGGGAGATCCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000477748.1 ENST00000486044.1 |
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| CDS CCA 72 bp | GGAGGATTTGGGGCCCGGGATGGCGATGGCGACGGTTaGGCTGCAGTACCGTCTAGGCCGCATTCCTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GGFGARDGDGDG*AAVPSRPHSSP Trigger: AGGAGAGGAATGCGGCCTAGACGGTACTGCAGCCCAACCGTCGCCATCGCCATCCCGGGCCCCAAATCCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428104.2 |
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| CDS CCA 72 bp | CTCCTGAGAGAGAAAGCACAGCCTAAGGGGAGGATTTaGGGCCCGGGATGGCGATGGCGACGGTTGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLREKAQPKGRI*GPGWRWRRLGC Trigger: GCAGCCCAACCGTCGCCATCGCCATCCCGGGCCCCAAATCCTCCCCTTAGGCTGTGCTTTCTCTCTCAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428104.2 |
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| CDS GCA 72 bp | TGCTCCACACCAGGGACAGACAGGTCTTCTGTTCCTTaGCAGAGTATCTTCCCTGTCTCAGCATCCCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSTPGTDRSSVP*QSIFPVSASRR Trigger: CCTTCGGGATGCTGAGACAGGGAAGATACTCTGGCAAGGAACAGAAGACCTGTCTGTCCCTGGTGTGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000428104.2 ENST00000486044.1 |
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| CDS CCA 72 bp | ATAACGTTCCCAGTTAAGACGCTTGCTGGCATCATCTaGGACTCGGGTGCTGCCTCTATCAAGGACTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ITFPVKTLAGII*DSGAASIKDCQ Trigger: CTGGCAGTCCTTGATAGAGGCAGCACCCGAGTCCCAGATGATGCCAGCAAGCGTCTTAACTGGGAACGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287600.9 |
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| CDS CAA 72 bp | AGTTCTCGAGACACTGCCTTGCACTTGAGGATTTTCTaGGGAACACGGGCTTCATGCTCCACACCAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSRDTALHLRIF*GTRASCSTPGT Trigger: TGTCCCTGGTGTGGAGCATGAAGCCCGTGTTCCCAAGAAAATCCTCAAGTGCAAGGCAGTGTCTCGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000428104.2 ENST00000486044.1 |
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| CDS GCA 72 bp | ATCATCTGGGACTCGGGTGCTGCCTCTATCAAGGACTaGCAGGTATTTGTGGAGTTAGGGATCACAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IIWDSGAASIKD*QVFVELGITKP Trigger: TGGCTTTGTGATCCCTAACTCCACAAATACCTGGCAGTCCTTGATAGAGGCAGCACCCGAGTCCCAGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287600.9 ENST00000428104.2 |
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| CDS GCA 72 bp | AGCTTCCTCCATGATCATATCACAATACAACGTCAGTaGCTAAACCAGGCACCACCATCCACGCTCCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SFLHDHITIQRQ*LNQAPPSTLPV Trigger: CACTGGGAGCGTGGATGGTGGTGCCTGGTTTAGGCACTGACGTTGTATTGTGATATGATCATGGAGGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486044.1 |
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| CDS CAA 72 bp | TCCTCTGAACCACACCAAAGGCTTGCTTCTCATGCTTaGAGGTCTAAAGGACTAGGACCAGCGAGCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSEPHQRLASHA*RSKGLGPASRT Trigger: TGTCCTGCTCGCTGGTCCTAGTCCTTTAGACCTCAAAGCATGAGAAGCAAGCCTTTGGTGTGGTTCAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486044.1 |
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| CDS CAA 90 bp | CTCAGGTTGTCCTCTGAACCACACCAAAGGCTTGCTTCTCATGCTTaGAGGTCTAAAGGACTAGGACCAGCGAGCAGGACACAATATAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRLSSEPHQRLASHA*RSKGLGPASRTQYK Trigger: CTTATATTGTGTCCTGCTCGCTGGTCCTAGTCCTTTAGACCTCAAAGCATGAGAAGCAAGCCTTTGGTGTGGTTCAGAGGACAACCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486044.1 |
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| CDS CAA 90 bp | TGTTCTGTCGAAGAAAAATTAAGTTCTCGAGACACTGCCTTGCACTaGAGGATTTTCTTGGGAACACGGGCTTCATGCTCCACACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CSVEEKLSSRDTALH*RIFLGTRASCSTPG Trigger: CCCTGGTGTGGAGCATGAAGCCCGTGTTCCCAAGAAAATCCTCAAGTGCAAGGCAGTGTCTCGAGAACTTAATTTTTCTTCGACAGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000428104.2 ENST00000486044.1 |
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| CDS TCA 72 bp | GAGGATGAGCACGCCACTGCTCTCATGCTAACTTTTTaGTGTGGCTGCTTCCCTTGTGCTTCAGGATTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: EDEHATALMLTF*CGCFPCASGFN Trigger: ATTAAATCCTGAAGCACAAGGGAAGCAGCCACATCAAAAAGTTAGCATGAGAGCAGTGGCGTGCTCATCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477748.1 |
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| CDS CAA 72 bp | AGCCTGTTTCTGGATGCACTAACATCACTGAATCGGTaGATTCGCTTTTCCTTCCAGTGGGCTGACACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLFLDALTSLNR*IRFSFQWADTD Trigger: ATCTGTGTCAGCCCACTGGAAGGAAAAGCGAATCAACCGATTCAGTGATGTTAGTGCATCCAGAAACAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477748.1 |
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| CDS CAA 72 bp | GAGACCTCAAAGCCCCTTGTAGTGGCTAGCTTTGTTTaGGTTTGTTTCACTGGGGATTCACAGTCTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ETSKPLVVASFV*VCFTGDSQSCR Trigger: TCTGCAAGACTGTGAATCCCCAGTGAAACAAACCAAAACAAAGCTAGCCACTACAAGGGGCTTTGAGGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486044.1 |
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| CDS TCA 72 bp | TCCCTGTCTCAGCATCCCGAAGGTTCATCCAATTTCTaGTCAAATATGACCTCAAAAGAAGATGACAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLSQHPEGSSNF*SNMTSKEDDSP Trigger: CGGGCTGTCATCTTCTTTTGAGGTCATATTTGATCAGAAATTGGATGAACCTTCGGGATGCTGAGACAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428104.2 |
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| CDS CAA 72 bp | GAAGAAAAATTAAGTTCTCGAGACACTGCCTTGCACTaGAGGATTTTCTTGGGAACACGGGCTTCATGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EEKLSSRDTALH*RIFLGTRASCS Trigger: GGAGCATGAAGCCCGTGTTCCCAAGAAAATCCTCAAGTGCAAGGCAGTGTCTCGAGAACTTAATTTTTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000428104.2 ENST00000486044.1 |
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| CDS CAA 90 bp | TCCATTTGTTCTGTCGAAGAAAAATTAAGTTCTCGAGACACTGCCTaGCACTTGAGGATTTTCTTGGGAACACGGGCTTCATGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SICSVEEKLSSRDTA*HLRIFLGTRASCST Trigger: TGTGGAGCATGAAGCCCGTGTTCCCAAGAAAATCCTCAAGTGCAAGGCAGTGTCTCGAGAACTTAATTTTTCTTCGACAGAACAAATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000428104.2 ENST00000486044.1 |
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| CDS GCA 72 bp | TTGTTCTGTCGAAGAAAAATTAAGTTCTCGAGACACTaGCTTGCACTTGAGGATTTTCTTGGGAACACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LFCRRKIKFSRH*LALEDFLGNTG Trigger: GCCCGTGTTCCCAAGAAAATCCTCAAGTGCAAGGCAGTGTCTCGAGAACTTAATTTTTCTTCGACAGAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000287600.9 ENST00000409772.5 ENST00000428104.2 ENST00000486044.1 |
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| CDS CAA 72 bp | CTTTGTTTTGGTTTGTTTCACTGGGGATTCACAGTCTaGCAGAGTGTAGGAATCCTACCACAAACTGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LCFGLFHWGFTV*QSVGILPQTEL Trigger: CAACTCAGTTTGTGGTAGGATTCCTACACTCTGCAAGACTGTGAATCCCCAGTGAAACAAACCAAAACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486044.1 |
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| CDS GCA 72 bp | TTAAATTCACTTGGAATTAGCTTGAAGGGGCTTATGTaGCCTTTACACTGCATGGTGAGAATTCAATGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LNSLGISLKGLM*PLHCMVRIQCR Trigger: TCTGCATTGAATTCTCACCATGCAGTGTAAAGGGCACATAAGCCCCTTCAAGCTAATTCCAAGTGAATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486044.1 |
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