RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE6B (Homo sapiens)

Ensembl gene IDs: ENSG00000133256

Ensembl transcript IDs: ENST00000255622.10, ENST00000429163.6, ENST00000460119.1, ENST00000461490.1, ENST00000465426.5, ENST00000467152.1, ENST00000471824.6, ENST00000474251.5, ENST00000476034.5, ENST00000487902.5, ENST00000488061.5, ENST00000496514.6

Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCATGGACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATaGATGAGTAATGTAGGCTACAGTTTATTCACAGTTGGCTTCAGT +
Preference number: 1 (lower is better)
Translates to: SWTLFKGLPVVTIQK*MSNVGYSLFTVGFS
Trigger: ACTGAAGCCAACTGTGAATAAACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGTCCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
3UTR-3UTR CCA 90 bp TGGGTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATAGCAGGTTGAAGACTTaGGTGCTGGGCCGCCATTGC +
Preference number: 2 (lower is better)
Translates to: WVKIEGAIGSPWDQCSQDSRLKT*VLGRHC
Trigger: GCAATGGCGGCCCAGCACCCAAGTCTTCAACCTGCT...ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
3UTR-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAGGTGGAGGTTGCAGTaGGCTGAGATCGTGCCACGG +
Preference number: 2 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSRWRLQ*AEIVPR
Trigger: CCGTGGCACGATCTCAGCTCACTGCAACCTCCACCT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
3UTR-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCTAGTGGGTGAAGATTaGGGGAGCCATAGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSLVGED*GSHRVP
Trigger: GGGGACCCTATGGCTCCCTCAATCTTCACCCACTAG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
3UTR-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCTAGTGGGTGAAGATTaGGGGAGCCATAGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSLVGED*GSHRVP
Trigger: GGGGACCCTATGGCTCCCTCAATCTTCACCCACTAG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
3UTR-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAGGTGGAGGTTGCAGTaGGCTGAGATCGTGCCACGG +
Preference number: 2 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVRWRLQ*AEIVPR
Trigger: CCGTGGCACGATCTCAGCTCACTGCAACCTCCACCT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
3UTR-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAGGCGGGTGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVRRVIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCACCCGCCT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
3UTR-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCACGAGAATCGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVGTRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCGATTCTCGTGCC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
3UTR TCA 72 bp ACACATATGTACATGTGTGGCTGCAAATGTTCTCAGTaGTTTCAGAGTTCATGGACCCTTTTCAAAGGTCTC +
Preference number: 3 (lower is better)
Translates to: THMYMCGCKCSQ*FQSSWTLFKGL
Trigger: GAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGCCACACATGTACATATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
3UTR-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTCTTCAGTCATTTTCTaGGGCTTCCTAACCTCTTGT +
Preference number: 3 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSSVIF*GFLTSC
Trigger: ACAAGAGGTTAGGAAGCCCAAGAAAATGACTGAAGA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
3UTR-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATCTTCAGTCATTTTCTaGGGCTTCCTAACCTCTTGT +
Preference number: 3 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSSVIF*GFLTSC
Trigger: ACAAGAGGTTAGGAAGCCCAAGAAAATGACTGAAGA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp TGGGTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATAGCCCACTTGCAGCTTaGGGAGCTCGGCCGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WVKIEGAIGSPWDQCSQDSPLAA*GARPPC
Trigger: ACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCT...ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR TCA 90 bp TGGGTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATCCAGGTCCGTGGCGATaGTGGCGATGTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: WVKIEGAIGSPWDQCSQDPGPWR*WRCPSG
Trigger: ACCTGATGGACATCGCCATCATCGCCACGGACCTGG...ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR GCA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCAATCACGTGCTCGTGCTaGCGCCGGTTCAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTAITCSC*RRFRFW
Trigger: CCAGAACCTGAACCGGCGGCAGCACGAGCACGTGAT...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR GCA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCATGGATCACGTGCTCGTaGTGCCGCCGGTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTAWITCS*CRRFRF
Trigger: GAACCTGAACCGGCGGCAGCACGAGCACGTGATCCA...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR GCA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCAATCAGGTGGATCACGTaGTCGTGCTGCCGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTAIRWIT*SCCRRF
Trigger: GAACCGGCGGCAGCACGAGCACGTGATCCACCTGAT...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR GCA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCATCGATGAAGCCCACTTaGAGCTTGGGGAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTASMKPT*SLGSSA
Trigger: GGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGA...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR TCA 90 bp TGGGTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATTGCACACGAAGTCGATaGAGCCCACTTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: WVKIEGAIGSPWDQCSQDCTRSR*SPLAAW
Trigger: CCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCA...ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR TCA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACACTAGTGGGTGAAGATTaGGGGAGCCATAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTLVGED*GSHRVP
Trigger: GGGGACCCTATGGCTCCCTCAATCTTCACCCACTAG...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR GCA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCACGAGAAGTGCGACCTTaGTCTGGACTTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTAREVRP*SGLPRA
Trigger: AGCCCTGGGAAGTCCAGAGCAAGGTCGCACTTCTCG...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CCA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCGATGTCCATCAGGTaGATCACGTGCTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTAMSIR*ITCSCC
Trigger: GCAGCACGAGCACGTGATCCACCTGATGGACATCGC...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CCA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAAGTGCGACCTTGCTCTaGACTTCCCAGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTSATLL*TSQGLV
Trigger: CACCAAGCCCTGGGAAGTCCAGAGCAAGGTCGCACT...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CCA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCCATAGGGTCCCCATaGGACCAGTGCTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTAIGSP*DQCSQD
Trigger: ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGC...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR TCA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCAACATCGCTCTCTTCTTaGAGTACAGGGCCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTATSLSS*STGPGP
Trigger: CGGACCTGGCCCTGTACTTCAAGAAGAGAGCGATGT...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCCCGGCCATCAGGCGTaGGTGGGCCCGAGTACGGCT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSPGHQA*VGPSTA
Trigger: AGCCGTACTCGGGCCCACGCACGCCTGATGGCCGGG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp TGGGTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATCTTTCCAAGTCACCTTaGTCCCAGAACTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WVKIEGAIGSPWDQCSQDLSKSP*SQNSAA
Trigger: GGCTGCTGAGTTCTGGGAGCAAGGTGACTTGGAAAG...ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR GCA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACATCCCCATGGGACCAGTaGTCACAGGATACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTSPWDQ*SQDTAG
Trigger: ACCTGCTGTATCCTGTGAGCACTGGTCCCATGGGGA...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGACCACAGCAGCACCTaGCCGCGGCGCGTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSDHSST*PRRVSQ
Trigger: CTGCGAGACGCGCCGCGGCCAGGTGCTGCTGTGGTC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGCCATCAGGCGTGCGTaGGCCCGAGTACGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSAIRRA*ARVRLG
Trigger: TCCCAGCCGTACTCGGGCCCACGCACGCCTGATGGC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGCCGGCTGTCACCATaGCGAAGGCCTCCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGRLSP*RRPPGP
Trigger: CGGACCTGGAGGCCTTCGCCATGGTGACAGCCGGCC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGGCCTGCTCCTCACTaGGGCTCATGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGPAPH*GSWWLP
Trigger: AGGCAGCCACCATGAGCCTCAGTGAGGAGCAGGCCC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTGCGCTGGCGGTACATaGAGAGGCTGCAGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSCAGGT*RGCSGR
Trigger: CCGACCGCTGCAGCCTCTTCATGTACCGCCAGCGCA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCAATAGGAATGGGCTGCTaGTCCAAGACTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTAIGMGC*SKTVLS
Trigger: GGAAAGGACAGTCTTGGATCAGCAGCCCATTCCTAT...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGCTCCAGCAGCGCCGTaGTCTCCTCCACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSAPAAP*SPPPGR
Trigger: TCTGCCAGGTGGAGGAGAGCACGGCGCTGCTGGAGC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCTGCAGCGGTCGGCCTaGAGGAGGGTGCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSLQRSA*RRVQRR
Trigger: GCGCCTCTGCACCCTCCTGCAGGCCGACCGCTGCAG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCCCGGCCATCAGGCGTaGGTGGGCCCGAGTACGGCT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSPGHQA*VGPSTA
Trigger: AGCCGTACTCGGGCCCACGCACGCCTGATGGCCGGG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGTGCTGGGCCGCCATTaGAAATTTCTGTGCCTACTT +
Preference number: 4 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTVLGRH*KFLCLL
Trigger: AAGTAGGCACAGAAATTTGCAATGGCGGCCCAGCAC...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAGCTTGGAAGGCCGCTaGCCAGGGCCCAGTGATCGG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSSLEGR*PGPSDR
Trigger: CCGATCACTGGGCCCTGGCCAGCGGCCTTCCAAGCT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTGTCCGGCTGCACGCTaGAAAGCCTGGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSCPAAR*KAWWPA
Trigger: AGCTGGCCACCAGGCTTTTCAGCGTGCAGCCGGACA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCTGGCCAGGGCCCAGTaGTCGGCTGAGGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSLARAQ*SAEGVG
Trigger: TCCCACACCCTCAGCCGATCACTGGGCCCTGGCCAG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACTGCAGCGGTCGGCCTaGAGGAGGGTGCAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVLQRSA*RRVQRR
Trigger: GCGCCTCTGCACCCTCCTGCAGGCCGACCGCTGCAG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCCCTGGAGACGCTGCTaGTCCAGGCACGCATGGACT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSPWRRC*SRHAWT
Trigger: AGTCCATGCGTGCCTGGAGCAGCAGCGTCTCCAGGG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTGTCCCTGGAGACGCTaGTGCTCCAGGCACGCATGG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSCPWRR*CSRHAW
Trigger: CCATGCGTGCCTGGAGCAGCAGCGTCTCCAGGGACA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGACCACAGCAGCACCTaGCCGCGGCGCGTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVDHSST*PRRVSQ
Trigger: CTGCGAGACGCGCCGCGGCCAGGTGCTGCTGTGGTC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGGCCCGAGTACGGCTaGGACTCTCCCATCAGCACA +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGPEYG*DSPIST
Trigger: TGTGCTGATGGGAGAGTCCCAGCCGTACTCGGGCCC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTTCTGCCACGTAGCTTaGAAGGCCGCTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSFCHVA*KAAGQG
Trigger: GCCCTGGCCAGCGGCCTTCCAAGCTACGTGGCAGAA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCGGTGGTCGATGTCATaGCACAGGCCGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSRWSMS*HRPAVT
Trigger: GGTGACAGCCGGCCTGTGCCATGACATCGACCACCG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGGGCCTGCTCCTCACTaGGGCTCATGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSGPAPH*GSWWLP
Trigger: AGGCAGCCACCATGAGCCTCAGTGAGGAGCAGGCCC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGGCGCCGCAGGACCTTaGAGACCACGCGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSGAAGP*RPRAPC
Trigger: ACATGGAGCGCGTGGTCTTCAAGGTCCTGCGGCGCC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTGCGCTGGCGGTACATaGAGAGGCTGCAGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSCAGGT*RGCSGR
Trigger: CCGACCGCTGCAGCCTCTTCATGTACCGCCAGCGCA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGCAAATGAGCTGAAGTaGGGGCACTCGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSANELK*GHSATS
Trigger: GGACGTGGCCGAGTGCCCTCACTTCAGCTCATTTGC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGCCCAGTGATCGGCTaGGGGTGTGGGAATGACCTT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGPVIG*GCGNDL
Trigger: AAGGTCATTCCCACACCCTCAGCCGATCACTGGGCC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAGGCGGGTGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSRRVIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCACCCGCCT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCATCAGGTGGATCACGTaGTCGTGCTGCCGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSIRWIT*SCCRRF
Trigger: GAACCGGCGGCAGCACGAGCACGTGATCCACCTGAT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGCTTGGAAGGCCGCTaGCCAGGGCCCAGTGATCGG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSLEGR*PGPSDR
Trigger: CCGATCACTGGGCCCTGGCCAGCGGCCTTCCAAGCT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCACCTCCTGGGGGATCTaGAACTTTCGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSTSWGI*NFRTTP
Trigger: GGGCGTGGTCCGAAAGTTCCAGATCCCCCAGGAGGT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCCGGCTGTCACCATaGCGAAGGCCTCCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVGRLSP*RRPPGP
Trigger: CGGACCTGGAGGCCTTCGCCATGGTGACAGCCGGCC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCATGTCCTGGTAGTTCTTaGACTCATCCACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTACPGSS*THPRSS
Trigger: AGAAGATCGTGGATGAGTCCAAGAACTACCAGGACA...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCGCCGCAGGACCTTaGAGACCACGCGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVGAAGP*RPRAPC
Trigger: ACATGGAGCGCGTGGTCTTCAAGGTCCTGCGGCGCC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGTACCGCTCGCAGTTaGGGTAGGCCCGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSTARS*GRPAPC
Trigger: ACACGGTGCGGGCCTACCTCAACTGCGAGCGGTACT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCTCTGGTTGGCAGGATaGGCTGGATCTCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSLWLAG*AGSRPC
Trigger: ACAGGGACGAGATCCAGCTCATCCTGCCAACCAGAG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGCACGAGAATCGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGTRIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCGATTCTCGTGCC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGAGGCTCATGGTGGCTaGCTGTCCCTGGAGACGCTG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSEAHGG*LSLETL
Trigger: CAGCGTCTCCAGGGACAGGCAGCCACCATGAGCCTC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAGAAAGCTCCGGGCCTaGTCCTCACTGAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSRKLRA*SSLRLM
Trigger: CATGAGCCTCAGTGAGGAGCAGGCCCGGAGCTTTCT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGCCTACTTTCTTGGCTaGCACCCTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSAYFLG*HPLLLL
Trigger: GAGGAGGAGGAGAGGGTGGCAGCCAAGAAAGTAGGC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGCAAAATCGGGGTTCTaGTCCAGAAAGCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSAKSGF*SRKLRA
Trigger: GGCCCGGAGCTTTCTGGACCAGAACCCCGATTTTGC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGCCACGCCGTTGCGCTaGCGGTACATGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSATPLR*RYMKRL
Trigger: CAGCCTCTTCATGTACCGCCAGCGCAACGGCGTGGC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAGCGTGAACATCGTCTaGGCCACGTTGAAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSSVNIV*ATLKPW
Trigger: CCACGGCTTCAACGTGGCCCAGACGATGTTCACGCT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCGGTGGTCGATGTCATaGCACAGGCCGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSRWSMS*HRPAVT
Trigger: GGTGACAGCCGGCCTGTGCCATGACATCGACCACCG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAGTGCGACCTTGCTCTaGACTTCCCAGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSSATLL*TSQGLV
Trigger: CACCAAGCCCTGGGAAGTCCAGAGCAAGGTCGCACT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGCCATAGGGTCCCCATaGGACCAGTGCTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSAIGSP*DQCSQD
Trigger: ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATGTCCGGCTGCACGCTaGAAAGCCTGGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVCPAAR*KAWWPA
Trigger: AGCTGGCCACCAGGCTTTTCAGCGTGCAGCCGGACA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGCAAATGAGCTGAAGTaGGGGCACTCGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSANELK*GHSATS
Trigger: GGACGTGGCCGAGTGCCCTCACTTCAGCTCATTTGC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGGCCCAGTGATCGGCTaGGGGTGTGGGAATGACCTT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSGPVIG*GCGNDL
Trigger: AAGGTCATTCCCACACCCTCAGCCGATCACTGGGCC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGTGTCAGGGACTCCATaGGAACCTCGTCCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSVSGTP*EPRPVR
Trigger: ACGAACAGGACGAGGTTCTCATGGAGTCCCTGACAC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTCTGGATGCCACATTTaGCCAGGTCCAGTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSSGCHI*PGPVRC
Trigger: GCACCGAACTGGACCTGGTCAAATGTGGCATCCAGA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTCCGGTACCCTTTGCTaGTGGAGAACAGGAACCGCA +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSSGTLC*WRTGTA
Trigger: TGCGGTTCCTGTTCTCCATCAGCAAAGGGTACCGGA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCCAGGTCCGTGGCGATaGTGGCGATGTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSPGPWR*WRCPSG
Trigger: ACCTGATGGACATCGCCATCATCGCCACGGACCTGG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGGTGGAGGTTGCAGTaGGCTGAGATCGTGCCACGG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSRWRLQ*AEIVPR
Trigger: CCGTGGCACGATCTCAGCTCACTGCAACCTCCACCT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGAGGCTCATGGTGGCTaGCTGTCCCTGGAGACGCTG +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVEAHGG*LSLETL
Trigger: CAGCGTCTCCAGGGACAGGCAGCCACCATGAGCCTC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGGACGCTGTCCGGCTaGACGCTGAAAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSRTLSG*TLKSLV
Trigger: CACCAGGCTTTTCAGCGTGCAGCCGGACAGCGTCCT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAAGGCCTTGTGGAACTaGCTCTCGATGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSKALWN*LSMSVS
Trigger: GCTGACGGACATCGAGAGGCAGTTCCACAAGGCCTT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGTACAGGTTGTTGGTaGCGCGGTGGTCGATGTCAT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGTGCW*RGGRCH
Trigger: ATGACATCGACCACCGCGGCACCAACAACCTGTACC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCCAAACTCCAGGTGGTaGCGCTCCAAAATCGAGGAG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSPNSRW*RSKIEE
Trigger: CTCCTCGATTTTGGAGCGGCACCACCTGGAGTTTGG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTATCACGTGCTCGTGCTaGCGCCGGTTCAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSITCSC*RRFRFW
Trigger: CCAGAACCTGAACCGGCGGCAGCACGAGCACGTGAT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTGGATCACGTGCTCGTaGTGCCGCCGGTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSWITCS*CRRFRF
Trigger: GAACCTGAACCGGCGGCAGCACGAGCACGTGATCCA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTATCAGGTGGATCACGTaGTCGTGCTGCCGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSIRWIT*SCCRRF
Trigger: GAACCGGCGGCAGCACGAGCACGTGATCCACCTGAT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGGCCCGAGTACGGCTaGGACTCTCCCATCAGCACA +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVGPEYG*DSPIST
Trigger: TGTGCTGATGGGAGAGTCCCAGCCGTACTCGGGCCC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATTCTGCCACGTAGCTTaGAAGGCCGCTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVFCHVA*KAAGQG
Trigger: GCCCTGGCCAGCGGCCTTCCAAGCTACGTGGCAGAA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAAATGTGGTGGGCCCTaGCAGCTCCTCCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSKCGGP*QLLLQD
Trigger: ATCCTGAAGGAGGAGCTGCCAGGGCCCACCACATTT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAGATGTCAAATGTGGTaGGCCCTGGCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSRCQMW*ALAAPP
Trigger: AGGAGGAGCTGCCAGGGCCCACCACATTTGACATCT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCGTAGATGTCAAATGTaGTGGGCCCTGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSRRCQM*WALAAP
Trigger: AGGAGCTGCCAGGGCCCACCACATTTGACATCTACG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTACCTCCTGGGGGATCTaGAACTTTCGGACCACGCCC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSTSWGI*NFRTTP
Trigger: GGGCGTGGTCCGAAAGTTCCAGATCCCCCAGGAGGT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCGCACCAGGACCTCCTaGGGGATCTGGAACTTTCGG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSRTRTS*GIWNFR
Trigger: CCGAAAGTTCCAGATCCCCCAGGAGGTCCTGGTGCG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTCTGGTACAGGTTGTTaGTGCCGCGGTGGTCGATGT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSSGTGC*CRGGRC
Trigger: ACATCGACCACCGCGGCACCAACAACCTGTACCAGA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAGCCCACTTGCAGCTTaGGGAGCTCGGCCGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSPLAA*GARPPC
Trigger: ACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGCAGTCGGTCGAACATaGGCAGGATCTCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSAVGRT*AGSLRG
Trigger: TCCACGAAGAGATCCTGCCCATGTTCGACCGACTGC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTACCATCTTTTTGGTCTaGGCCACGTGGCCCACGACC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSTIFLV*ATWPTT
Trigger: GGTCGTGGGCCACGTGGCTCAGACCAAAAAGATGGT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCGTCAGCAAATGAGCTaGAGTGAGGGCACTCGGCCA +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSRQQMS*SEGTRP
Trigger: TGGCCGAGTGCCCTCACTTCAGCTCATTTGCTGACG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCTCTGGTTGGCAGGATaGGCTGGATCTCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSLWLAG*AGSRPC
Trigger: ACAGGGACGAGATCCAGCTCATCCTGCCAACCAGAG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACCAGGTCCGTGGCGATaGTGGCGATGTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVPGPWR*WRCPSG
Trigger: ACCTGATGGACATCGCCATCATCGCCACGGACCTGG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGAAAGCTCCGGGCCTaGTCCTCACTGAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSRKLRA*SSLRLM
Trigger: CATGAGCCTCAGTGAGGAGCAGGCCCGGAGCTTTCT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGTTGAGCTTGTTCACTaGCATGATCACCGCCACGAC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSVELVH*HDHRHD
Trigger: GTCGTGGCGGTGATCATGGCAGTGAACAAGCTCAAC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCCTGTGCGATGTCCTTaGGGTTCTCCAGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSPVRCP*GSPACS
Trigger: TGAACAAGCTGGAGAACCGCAAGGACATCGCACAGG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAAGGACCATGTCCTGTaGGATGTCCTTGCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSKDHVL*DVLAVL
Trigger: GAGAACCGCAAGGACATCGCACAGGACATGGTCCTT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAATCACGTGCTCGTGCTaGCGCCGGTTCAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVITCSC*RRFRFW
Trigger: CCAGAACCTGAACCGGCGGCAGCACGAGCACGTGAT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATGGATCACGTGCTCGTaGTGCCGCCGGTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVWITCS*CRRFRF
Trigger: GAACCTGAACCGGCGGCAGCACGAGCACGTGATCCA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCGAGAAGTGCGACCTTaGTCTGGACTTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSREVRP*SGLPRA
Trigger: AGCCCTGGGAAGTCCAGAGCAAGGTCGCACTTCTCG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATCGATGAAGCCCACTTaGAGCTTGGGGAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSMKPT*SLGSSA
Trigger: GGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACACATTGCAAATTTCTGTaGCTACTTGTACACGAATGT +
Preference number: 4 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTHCKFL*LLVHEC
Trigger: ACATTCGTGTACAAGTAGGCACAGAAATTTGCAATG...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGTTGGCAGGATGAGCTaGATCTCGTCCCTGTCGCAC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSVGRMS*ISSLSH
Trigger: GTGCGACAGGGACGAGATCCAGCTCATCCTGCCAAC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACGCACCAGGACCTCCTaGGGGATCTGGAACTTTCGG +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVRTRTS*GIWNFR
Trigger: CCGAAAGTTCCAGATCCCCCAGGAGGTCCTGGTGCG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGCGATGTCCATCAGGTaGATCACGTGCTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSAMSIR*ITCSCC
Trigger: GCAGCACGAGCACGTGATCCACCTGATGGACATCGC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGTGCGACCTTGCTCTaGACTTCCCAGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSATLL*TSQGLV
Trigger: CACCAAGCCCTGGGAAGTCCAGAGCAAGGTCGCACT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGCAGGTTGAAGACTTaGGTGCTGGGCCGCCATTGC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSRLKT*VLGRHC
Trigger: GCAATGGCGGCCCAGCACCCAAGTCTTCAACCTGCT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGAGCTCGTCAGCAAATaGGCTGAAGTGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSELVSK*AEVRAL
Trigger: GAGTGCCCTCACTTCAGCTCATTTGCTGACGAGCTC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGTGTCAGGGACTCCATaGGAACCTCGTCCTGTTCGT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSVSGTP*EPRPVR
Trigger: ACGAACAGGACGAGGTTCTCATGGAGTCCCTGACAC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGTCGGTGTTCATCACTaGCCAGCCCAGGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSVGVHH*PAQELC
Trigger: ACACAGTTCCTGGGCTGGTCAGTGATGAACACCGAC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTACATCGCTCTCTTCTTaGAGTACAGGGCCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSTSLSS*STGPGP
Trigger: CGGACCTGGCCCTGTACTTCAAGAAGAGAGCGATGT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTGCACACGAAGTCGATaGAGCCCACTTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSCTRSR*SPLAAW
Trigger: CCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCATGTTGATGCTCTCCTaGATATCCTGCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSMLMLS*ISCTSS
Trigger: GGAGCTGGTGCAGGATATGCAGGAGAGCATCAACAT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCCAGGTCCAGTTCGGTaGACTCCAGGTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSPGPVR*TPGQRS
Trigger: ACTTCTCTGACCTGGAGTGCACCGAACTGGACCTGG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGTGCTGGGCCGCCATTaGAAATTTCTGTGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSVLGRH*KFLCLS
Trigger: AGAAAGGCACAGAAATTTGCAATGGCGGCCCAGCAC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255622.10
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTCCCCATGGGACCAGTaGTCACAGGATACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSPWDQ*SQDTAG
Trigger: ACCTGCTGTATCCTGTGAGCACTGGTCCCATGGGGA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGTGCTGGGCCGCCATTaGAAATTTCTGTGCCTACTT +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSVLGRH*KFLCLL
Trigger: AAGTAGGCACAGAAATTTGCAATGGCGGCCCAGCAC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTTCTTCCCAAAGTACTaGCGGGCAAAATCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSFFPKY*RAKSGF
Trigger: GAACCCCGATTTTGCCCGCCAGTACTTTGGGAAGAA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGACCCCGATGTCCAGTaGGAAGACGATCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVDPDVQ*EDDLGV
Trigger: GACTCCGAGATCGTCTTCCCACTGGACATCGGGGTC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCCTCAAACACCTTGTTaGCCGACCACAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSPQTPC*PTTAAP
Trigger: AGGTGCTGCTGTGGTCGGCCAACAAGGTGTTTGAGG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAAATGTGGTGGGCCCTaGCAGCTCCTCCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSKCGGP*QLLLQD
Trigger: ATCCTGAAGGAGGAGCTGCCAGGGCCCACCACATTT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGCGATGTCCATCAGGTaGATCACGTGCTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVAMSIR*ITCSCC
Trigger: GCAGCACGAGCACGTGATCCACCTGATGGACATCGC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGCAGGATCTCTTCGTaGAAACGAGAGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGRISS*KRENSL
Trigger: CAAGGAGTTCTCTCGTTTCCACGAAGAGATCCTGCC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAGCAGGTTGAAGACTTaGGTGCTGGGCCGCCATTGC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSRLKT*VLGRHC
Trigger: GCAATGGCGGCCCAGCACCCAAGTCTTCAACCTGCT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGCCATAGGGTCCCCATaGGACCAGTGCTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVAIGSP*DQCSQD
Trigger: ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCTGTGCCTACTTTCTTaGCTGCCACCCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSLCLLS*LPPSPP
Trigger: AGGAGGAGAGGGTGGCAGCCAAGAAAGTAGGCACAG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496514.6
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACCACGCGCTCCATGTTaGTGCTCTCCTGCATATCCT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVPRAPC*CSPAYP
Trigger: AGGATATGCAGGAGAGCATCAACATGGAGCGCGTGG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGAGCTCGTCAGCAAATaGGCTGAAGTGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVELVSK*AEVRAL
Trigger: GAGTGCCCTCACTTCAGCTCATTTGCTGACGAGCTC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTTGTCTTGTAGTCAGTaGGCTCGTCAGCAAATGAGC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSLSCSQ*ARQQMS
Trigger: GCTCATTTGCTGACGAGCTCACTGACTACAAGACAA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTCTCCTCCTTCTTGTTaGCGATGGGCATGGACAGCA +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSPPSC*RWAWTA
Trigger: TGCTGTCCATGCCCATCGTCAACAAGAAGGAGGAGA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAACATCGCTCTCTTCTTaGAGTACAGGGCCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVTSLSS*STGPGP
Trigger: CGGACCTGGCCCTGTACTTCAAGAAGAGAGCGATGT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAAGGCCTTGTGGAACTaGCTCTCGATGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVKALWN*LSMSVS
Trigger: GCTGACGGACATCGAGAGGCAGTTCCACAAGGCCTT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAAGGACCATGTCCTGTaGGATGTCCTTGCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSKDHVL*DVLAVL
Trigger: GAGAACCGCAAGGACATCGCACAGGACATGGTCCTT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACCAGGTCCAGTTCGGTaGACTCCAGGTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVPGPVR*TPGQRS
Trigger: ACTTCTCTGACCTGGAGTGCACCGAACTGGACCTGG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGTACAGGTTGTTGGTaGCGCGGTGGTCGATGTCAT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVGTGCW*RGGRCH
Trigger: ATGACATCGACCACCGCGGCACCAACAACCTGTACC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACCAAACTCCAGGTGGTaGCGCTCCAAAATCGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVPNSRW*RSKIEE
Trigger: CTCCTCGATTTTGGAGCGGCACCACCTGGAGTTTGG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCTTTCCAAGTCACCTTaGTCCCAGAACTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSLSKSP*SQNSAA
Trigger: GGCTGCTGAGTTCTGGGAGCAAGGTGACTTGGAAAG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATCCCCATGGGACCAGTaGTCACAGGATACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSPWDQ*SQDTAG
Trigger: ACCTGCTGTATCCTGTGAGCACTGGTCCCATGGGGA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCGTTCACCATCTTTTTaGTCTGAGCCACGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSRSPSF*SEPRGP
Trigger: TGGGCCACGTGGCTCAGACCAAAAAGATGGTGAACG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACCTCAAACACCTTGTTaGCCGACCACAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVPQTPC*PTTAAP
Trigger: AGGTGCTGCTGTGGTCGGCCAACAAGGTGTTTGAGG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACGTAGATGTCAAATGTaGTGGGCCCTGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVRRCQM*WALAAP
Trigger: AGGAGCTGCCAGGGCCCACCACATTTGACATCTACG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAAAATCGAGGAGCCGTaGAGCTTAGCCAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSKIEEP*SLAKGF
Trigger: GAACCCCTTGGCTAAGCTCCACGGCTCCTCGATTTT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTTCCCAAACTCCAGGTaGTGCCGCTCCAAAATCGAG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSFPNSR*CRSKIE
Trigger: CTCGATTTTGGAGCGGCACCACCTGGAGTTTGGGAA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGCAGTCGGTCGAACATaGGCAGGATCTCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVAVGRT*AGSLRG
Trigger: TCCACGAAGAGATCCTGCCCATGTTCGACCGACTGC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTTTCTGTGCCTTTCTTaGCTGCCACCCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSFLCLS*LPPSPP
Trigger: AGGAGGAGAGGGTGGCAGCCAAGAAAGGCACAGAAA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255622.10
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATCTCCTCCTTCTTGTTaGCGATGGGCATGGACAGCA +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSPPSC*RWAWTA
Trigger: TGCTGTCCATGCCCATCGTCAACAAGAAGGAGGAGA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTATAGGAATGGGCTGCTaGTCCAAGACTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSIGMGC*SKTVLS
Trigger: GGAAAGGACAGTCTTGGATCAGCAGCCCATTCCTAT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTATGTTGATGCTCTCCTaGATATCCTGCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSMLMLS*ISCTSS
Trigger: GGAGCTGGTGCAGGATATGCAGGAGAGCATCAACAT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGTTGAGCTTGTTCACTaGCATGATCACCGCCACGAC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVVELVH*HDHRHD
Trigger: GTCGTGGCGGTGATCATGGCAGTGAACAAGCTCAAC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAATAAAGCCGCTTTCTaGCACGTAGCTTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSNKAAF*HVAWKA
Trigger: GGCCTTCCAAGCTACGTGGCAGAAAGCGGCTTTATT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACTTTCCAAGTCACCTTaGTCCCAGAACTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVLSKSP*SQNSAA
Trigger: GGCTGCTGAGTTCTGGGAGCAAGGTGACTTGGAAAG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACGTTCACCATCTTTTTaGTCTGAGCCACGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVRSPSF*SEPRGP
Trigger: TGGGCCACGTGGCTCAGACCAAAAAGATGGTGAACG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTTCGCTGGTGAAGAATaGGCCGTTGAGCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSFAGEE*AVELVH
Trigger: GTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAAAATCGAGGAGCCGTaGAGCTTAGCCAAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVKIEEP*SLAKGF
Trigger: GAACCCCTTGGCTAAGCTCCACGGCTCCTCGATTTT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATTCCCAAACTCCAGGTaGTGCCGCTCCAAAATCGAG +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVFPNSR*CRSKIE
Trigger: CTCGATTTTGGAGCGGCACCACCTGGAGTTTGGGAA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTTGTCTTGTAGTCAGTaGGCTCGTCAGCAAATGAGC +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSLSCSQ*ARQQMS
Trigger: GCTCATTTGCTGACGAGCTCACTGACTACAAGACAA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCCCCTTCCTGAAATTTaGACATTTCGTCAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSPLPEI*TFRQRK
Trigger: CTTCCGCTGACGAAATGTTCAAATTTCAGGAAGGGG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTGCAAATGTTCTCAGTaGTTTCAGAGTTCATGGACC +
Preference number: 4 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSCKCSQ*FQSSWT
Trigger: GGTCCATGAACTCTGAAATCACTGAGAACATTTGCA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATTCTTCCCAAAGTACTaGCGGGCAAAATCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVFFPKY*RAKSGF
Trigger: GAACCCCGATTTTGCCCGCCAGTACTTTGGGAAGAA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATTCGCTGGTGAAGAATaGGCCGTTGAGCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVFAGEE*AVELVH
Trigger: GTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACCCCTTCCTGAAATTTaGACATTTCGTCAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVPLPEI*TFRQRK
Trigger: CTTCCGCTGACGAAATGTTCAAATTTCAGGAAGGGG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATCCAGGGCCCCTTCCTaGAATTTGAACATTTCGTCA +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSRAPS*NLNISS
Trigger: TGACGAAATGTTCAAATTTCAGGAAGGGGCCCTGGA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATCTTTCCTATTGTTCTaGAGTCGGTCGAACATGGGC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSFLLF*SRSNMG
Trigger: GCCCATGTTCGACCGACTGCAGAACAATAGGAAAGA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACATTGCAAATTTCTGTaGCTTTCTTGGCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVHCKFL*LSWLPP
Trigger: GGGTGGCAGCCAAGAAAGGCACAGAAATTTGCAATG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255622.10
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTGTCCTGGTAGTTCTTaGACTCATCCACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSCPGSS*THPRSS
Trigger: AGAAGATCGTGGATGAGTCCAAGAACTACCAGGACA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR GCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCATTGCAAATTTCTGTaGCTACTTTCTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSHCKFL*LLSWLP
Trigger: TGGCAGCCAAGAAAGTAGGCACAGAAATTTGCAATG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATGTCCTGGTAGTTCTTaGACTCATCCACGATCTTCT +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVCPGSS*THPRSS
Trigger: AGAAGATCGTGGATGAGTCCAAGAACTACCAGGACA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTGTGTTTTCCTAAACTaGATGAGAAACGGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSCVFLN*MRNGLC
Trigger: ACACAGGCCGTTTCTCATCCAGTTTAGGAAAACACA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR TCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATGCAAATGTTCTCAGTaGTTTCAGAGTTCATGGACC +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVCKCSQ*FQSSWT
Trigger: GGTCCATGAACTCTGAAATCACTGAGAACATTTGCA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CCA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATCTTCAGGTACAACGTaGCAAAATTCAGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSSGTT*QNSGTS
Trigger: TGAAGTACCTGAATTTTGCCACGTTGTACCTGAAGA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS GCA 90 bp GGCCTCCGCCAAGCGTCCCAGGGCCCTCCTTGGGCCACCTTTCTCTaGCTCCTTGGTCAAGGCCCAGACCCAGGCCCCACCAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GLRQASQGPPWATFL*LLGQGPDPGPTRPC
Trigger: GCAGGGCCTGGTGGGGCCTGGGTCTGGGCCTTGACCAAGGAGGCAGAGAAAGGTGGCCCAAGGAGGGCCCTGGGACGCTTGGCGGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS GCA 90 bp GCGGCCCTCATTCAGGGACCAGCCCTGGACACCCCATCCCTGGAGTaGAGCAGCAGGGGAGCCTGGTGGAGACCACAGACAGGCACCCGG +
Preference number: 5 (lower is better)
Translates to: AALIQGPALDTPSLE*SSRGAWWRPQTGTR
Trigger: CCGGGTGCCTGTCTGTGGTCTCCACCAGGCTCCCCTGCTGCTGCACTCCAGGGATGGGGTGTCCAGGGCTGGTCCCTGAATGAGGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467152.1
ENST00000476034.5
CDS CCA 90 bp GCCCTGGGCCCCTCCCCTAAGACTCACCCGGCCATCAGGCGTGCGTaGGCCCGAGTACGGCTGGGACTCTCCCATCAGCACAGACCACAC +
Preference number: 5 (lower is better)
Translates to: ALGPSPKTHPAIRRA*ARVRLGLSHQHRPH
Trigger: GTGTGGTCTGTGCTGATGGGAGAGTCCCAGCCGTACTCGGGCCCACGCACGCCTGATGGCCGGGTGAGTCTTAGGGGAGGGGCCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467152.1
ENST00000474251.5
ENST00000476034.5
CDS CCA 90 bp GCCTGGCGGCCCTCATTCAGGGACCAGCCCTGGACACCCCATCCCTaGAGTGCAGCAGCAGGGGAGCCTGGTGGAGACCACAGACAGGCA +
Preference number: 5 (lower is better)
Translates to: AWRPSFRDQPWTPHP*SAAAGEPGGDHRQA
Trigger: TGCCTGTCTGTGGTCTCCACCAGGCTCCCCTGCTGCTGCACTCCAGGGATGGGGTGTCCAGGGCTGGTCCCTGAATGAGGGCCGCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467152.1
ENST00000476034.5
CDS CCA 90 bp GGGTCTTCACGACCAGCCTGGCGGCCCTCATTCAGGGACCAGCCCTaGACACCCCATCCCTGGAGTGCAGCAGCAGGGGAGCCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: GSSRPAWRPSFRDQP*TPHPWSAAAGEPGG
Trigger: TCCACCAGGCTCCCCTGCTGCTGCACTCCAGGGATGGGGTGTCCAGGGCTGGTCCCTGAATGAGGGCCGCCAGGCTGGTCGTGAAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS CCA 90 bp TCCAGAACCACCTGCGGCGAGCAGGGCTTTGAGAACATCGGGCCGTaGTTTCCGCACGTCAGGCCGCCTGTGGCCTCCGCCAAGCGTCCC +
Preference number: 5 (lower is better)
Translates to: SRTTCGEQGFENIGP*FPHVRPPVASAKRP
Trigger: GGGACGCTTGGCGGAGGCCACAGGCGGCCTGACGTGCGGAAACCACGGCCCGATGTTCTCAAAGCCCTGCTCGCCGCAGGTGGTTCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS CCA 90 bp TGGCTCCGTGGCCAGGTTTCATCTGAGCTTGTGGGGCCCGGGAGCTaGCTGGCGGTGAGGCCTCGAGGCTGCGGTCGTGTCCCTGATCAC +
Preference number: 5 (lower is better)
Translates to: WLRGQVSSELVGPGS*LAVRPRGCGRVPDH
Trigger: GTGATCAGGGACACGACCGCAGCCTCGAGGCCTCACCGCCAGCCAGCTCCCGGGCCCCACAAGCTCAGATGAAACCTGGCCACGGAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS TCA 90 bp GCCAGGTTTCATCTGAGCTTGTGGGGCCCGGGAGCTGGCTGGCGGTaGGGCCTCGAGGCTGCGGTCGTGTCCCTGATCACTCAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: ARFHLSLWGPGAGWR*GLEAAVVSLITQEW
Trigger: CCACTCCTGAGTGATCAGGGACACGACCGCAGCCTCGAGGCCTCACCGCCAGCCAGCTCCCGGGCCCCACAAGCTCAGATGAAACCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS GCA 90 bp GAGCTTGTGGGGCCCGGGAGCTGGCTGGCGGTGAGGCCTCGAGGCTaGGGTCGTGTCCCTGATCACTCAGGAGTGGACGAGTGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: ELVGPGSWLAVRPRG*GRVPDHSGVDEWKV
Trigger: CACTTTCCACTCGTCCACTCCTGAGTGATCAGGGACACGACCGCAGCCTCGAGGCCTCACCGCCAGCCAGCTCCCGGGCCCCACAAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS CCA 90 bp AGGAGCCCCCACAATCAGAGCCGACGTGGGTCTTCACGACCAGCCTaGCGGCCCTCATTCAGGGACCAGCCCTGGACACCCCATCCCTGG +
Preference number: 5 (lower is better)
Translates to: RSPHNQSRRGSSRPA*RPSFRDQPWTPHPW
Trigger: CCAGGGATGGGGTGTCCAGGGCTGGTCCCTGAATGAGGGCCGCCAGGCTGGTCGTGAAGACCCACGTCGGCTCTGATTGTGGGGGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS GCA 90 bp AACATCCGACCAGCCCTTCCTCCGCCCGGCTGCTCCAGAACCACCTaGGGCGAGCAGGGCTTTGAGAACATCGGGCCGTGGTTTCCGCAC +
Preference number: 5 (lower is better)
Translates to: NIRPALPPPGCSRTT*GEQGFENIGPWFPH
Trigger: GTGCGGAAACCACGGCCCGATGTTCTCAAAGCCCTGCTCGCCGCAGGTGGTTCTGGAGCAGCCGGGCGGAGGAAGGGCTGGTCGGATGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS GCA 90 bp GTCCAGAAAGCTCCGGGCCTGCTCCTCACTGAGGCTCATGGTGGCTaGCTGTCCCTGGAGACGCTGCTGCTCCAGGCACGCATGGACTCC +
Preference number: 5 (lower is better)
Translates to: VQKAPGLLLTEAHGG*LSLETLLLQARMDS
Trigger: GGAGTCCATGCGTGCCTGGAGCAGCAGCGTCTCCAGGGACAGGCAGCCACCATGAGCCTCAGTGAGGAGCAGGCCCGGAGCTTTCTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496514.6
CDS GCA 90 bp TACTGGCGGGCAAAATCGGGGTTCTGGTCCAGAAAGCTCCGGGCCTaGTCCTCACTGAGGCTCATGGTGGCTGCCTGTCCCTGGAGACGC +
Preference number: 5 (lower is better)
Translates to: YWRAKSGFWSRKLRA*SSLRLMVAACPWRR
Trigger: GCGTCTCCAGGGACAGGCAGCCACCATGAGCCTCAGTGAGGAGCAGGCCCGGAGCTTTCTGGACCAGAACCCCGATTTTGCCCGCCAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS TCA 90 bp CAAAATCGGGGTTCTGGTCCAGAAAGCTCCGGGCCTGCTCCTCACTaGGGCTCATGGTGGCTGCCTGTCCCTGGAGACGCTGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: QNRGSGPESSGPAPH*GSWWLPVPGDAAAP
Trigger: TGGAGCAGCAGCGTCTCCAGGGACAGGCAGCCACCATGAGCCTCAGTGAGGAGCAGGCCCGGAGCTTTCTGGACCAGAACCCCGATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CCA 90 bp CAGGCCGCGGCCACATTCTCAGGGCTCAGTTTCTTCCCAAAGTACTaGCGGGCAAAATCGGGGTTCTGGTCCAGAAAGCTCCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: QAAATFSGLSFFPKY*RAKSGFWSRKLRAC
Trigger: GCAGGCCCGGAGCTTTCTGGACCAGAACCCCGATTTTGCCCGCCAGTACTTTGGGAAGAAACTGAGCCCTGAGAATGTGGCCGCGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp TGGGTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATAAGCCCACTTGCAGCTaGGGGAGCTCGGCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: WVKIEGAIGSPWDQCSQDKPTCS*GSSAAL
Trigger: CAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTT...ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS GCA 90 bp TTCAGGGTCTCCTCCGAGAGCAGGAACTTCCCAAACTCCAGGTGGTaGCGCTCCAAAATCGAGGAGCCGTGGAGCTTAGCCAAGGGGTTC +
Preference number: 5 (lower is better)
Translates to: FRVSSESRNFPNSRW*RSKIEEPWSLAKGF
Trigger: GAACCCCTTGGCTAAGCTCCACGGCTCCTCGATTTTGGAGCGGCACCACCTGGAGTTTGGGAAGTTCCTGCTCTCGGAGGAGACCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS CCA 90 bp GGGCTCAGTTTCTTCCCAAAGTACTGGCGGGCAAAATCGGGGTTCTaGTCCAGAAAGCTCCGGGCCTGCTCCTCACTGAGGCTCATGGTG +
Preference number: 5 (lower is better)
Translates to: GLSFFPKYWRAKSGF*SRKLRACSSLRLMV
Trigger: CACCATGAGCCTCAGTGAGGAGCAGGCCCGGAGCTTTCTGGACCAGAACCCCGATTTTGCCCGCCAGTACTTTGGGAAGAAACTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CCA 90 bp ATGTTCAGGGTCTCCTCCGAGAGCAGGAACTTCCCAAACTCCAGGTaGTGCCGCTCCAAAATCGAGGAGCCGTGGAGCTTAGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: MFRVSSESRNFPNSR*CRSKIEEPWSLAKG
Trigger: CCCCTTGGCTAAGCTCCACGGCTCCTCGATTTTGGAGCGGCACCACCTGGAGTTTGGGAAGTTCCTGCTCTCGGAGGAGACCCTGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS-3UTR CAA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGGGAGCTCGGCCGCCTaGTTCCGGTCCATCATAGGA +
Preference number: 5 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTGSSAA*FRSIIG
Trigger: TCCTATGATGGACCGGAACAAGGCGGCCGAGCTCCC...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CAA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGTCGATGAAGCCCACTaGCAGCTTGGGGAGCTCGGC +
Preference number: 5 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTVDEAH*QLGELG
Trigger: GCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGAC...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS CCA 90 bp GGTTTTCGGATCCCACATGTGAGTGAGATCCTAGCTTTTGGCCAGTaGCATCCTCCAGGTCCATGCACGTCAGTGCCCTTCCCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: GFRIPHVSEILAFGQ*HPPGPCTSVPFPGS
Trigger: GCTGCCAGGGAAGGGCACTGACGTGCATGGACCTGGAGGATGCCACTGGCCAAAAGCTAGGATCTCACTCACATGTGGGATCCGAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS-3UTR CAA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCAACGAGAAGTGCGACCTaGCTCTGGACTTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTATRSAT*LWTSQG
Trigger: GCCCTGGGAAGTCCAGAGCAAGGTCGCACTTCTCGT...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CAA 90 bp AAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGCACAGCAGGTTGAAGACTaGGGTGCTGGGCCGCCATTG +
Preference number: 5 (lower is better)
Translates to: KIEGAIGSPWDQCSQDTAQQVED*GAGPPL
Trigger: CAATGGCGGCCCAGCACCCAAGTCTTCAACCTGCTG...TGCTGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS TCA 90 bp GGAAACGAGAGAACTCCTTGTACACGAATGTGCACACGAAGTCGATaGAGCCCACTTGCAGCTTGGGGAGCTCGGCCGCCTTGTTCCGGT +
Preference number: 5 (lower is better)
Translates to: GNERTPCTRMCTRSR*SPLAAWGARPPCSG
Trigger: ACCGGAACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTACAAGGAGTTCTCTCGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000461490.1
ENST00000496514.6
CDS GCA 90 bp GCCTACTTGTACACGAATGTGCACACGAAGTCGATGAAGCCCACTTaGAGCTTGGGGAGCTCGGCCGCCTTGTTCCGGTCCATCATAGGA +
Preference number: 5 (lower is better)
Translates to: AYLYTNVHTKSMKPT*SLGSSAALFRSIIG
Trigger: TCCTATGATGGACCGGAACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTACAAGTAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS CCA 90 bp CGGTGCACTCCAGGTCAGAGAAGTGGAATTCGTAGATGTCAAATGTaGTGGGCCCTGGCAGCTCCTCCTTCAGGATTTCGCCCAGCTCGT +
Preference number: 5 (lower is better)
Translates to: RCTPGQRSGIRRCQM*WALAAPPSGFRPAR
Trigger: ACGAGCTGGGCGAAATCCTGAAGGAGGAGCTGCCAGGGCCCACCACATTTGACATCTACGAATTCCACTTCTCTGACCTGGAGTGCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS CCA 90 bp CCTCGAGGCTGCGGTCGTGTCCCTGATCACTCAGGAGTGGACGAGTaGAAAGTGGAATCTGTCGCTTTGAGCTTGACAGGCAAACATCCG +
Preference number: 5 (lower is better)
Translates to: PRGCGRVPDHSGVDE*KVESVALSLTGKHP
Trigger: CGGATGTTTGCCTGTCAAGCTCAAAGCGACAGATTCCACTTTCCACTCGTCCACTCCTGAGTGATCAGGGACACGACCGCAGCCTCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS-3UTR CAA 90 bp TGGGTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATCCTTTCCAAGTCACCTaGCTCCCAGAACTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WVKIEGAIGSPWDQCSQDPFQVT*LPELSS
Trigger: GCTGCTGAGTTCTGGGAGCAAGGTGACTTGGAAAGG...ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS GCA 90 bp AACTCCTTGTACACGAATGTGCACACGAAGTCGATGAAGCCCACTTaGAGCTTGGGGAGCTCGGCCGCCTTGTTCCGGTCCATCATAGGA +
Preference number: 5 (lower is better)
Translates to: NSLYTNVHTKSMKPT*SLGSSAALFRSIIG
Trigger: TCCTATGATGGACCGGAACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTACAAGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000461490.1
ENST00000496514.6
CDS CCA 90 bp TGCACTCCAGGTCAGAGAAGTGGAATTCGTAGATGTCAAATGTGGTaGGCCCTGGCAGCTCCTCCTTCAGGATTTCGCCCAGCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: CTPGQRSGIRRCQMW*ALAAPPSGFRPARP
Trigger: AGGACGAGCTGGGCGAAATCCTGAAGGAGGAGCTGCCAGGGCCCACCACATTTGACATCTACGAATTCCACTTCTCTGACCTGGAGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS-3UTR CAA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAACAGGATACAGCAGGTaGAAGACTTGGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTTGYSR*KTWVLG
Trigger: GCCCAGCACCCAAGTCTTCAACCTGCTGTATCCTGT...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CAA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAGGTGCTGGGCCGCCATaGCAAATTTCTGTGCCTACT +
Preference number: 5 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTGAGPP*QISVPT
Trigger: AGTAGGCACAGAAATTTGCAATGGCGGCCCAGCACC...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS TCA 90 bp CAAATTTCTGTGCCTACTTGTACACGAATGTGCACACGAAGTCGATaGAGCCCACTTGCAGCTTGGGGAGCTCGGCCGCCTTGTTCCGGT +
Preference number: 5 (lower is better)
Translates to: QISVPTCTRMCTRSR*SPLAAWGARPPCSG
Trigger: ACCGGAACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTACAAGTAGGCACAGAAATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS-3UTR CAA 90 bp GTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATACAAACATCGCTCTCTTCTaGAAGTACAGGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VKIEGAIGSPWDQCSQDTNIALF*KYRARS
Trigger: GGACCTGGCCCTGTACTTCAAGAAGAGAGCGATGTT...TGTATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS GCA 90 bp GATCTCGTCCCTGTCGCACTTCACGTGGTAAAGGACCATGTCCTGTaGGATGTCCTTGCGGTTCTCCAGCTTGTTCATCTTGTCGTAGGT +
Preference number: 5 (lower is better)
Translates to: DLVPVALHVVKDHVL*DVLAVLQLVHLVVG
Trigger: ACCTACGACAAGATGAACAAGCTGGAGAACCGCAAGGACATCGCACAGGACATGGTCCTTTACCACGTGAAGTGCGACAGGGACGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAGCTCGGCCACGCCGTaGCGCTGGCGGTACATGAAG +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSSSATP*RWRYMK
Trigger: CTTCATGTACCGCCAGCGCAACGGCGTGGCCGAGCT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAAGCCCACTTGCAGCTaGGGGAGCTCGGCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSKPTCS*GSSAAL
Trigger: CAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS GCA 90 bp ATCTTCGTCTTCGCTGGTGAAGAATGGGCCGTTGAGCTTGTTCACTaGCATGATCACCGCCACGACGTCTTTGCCATTCATGATGGGTGT +
Preference number: 5 (lower is better)
Translates to: IFVFAGEEWAVELVH*HDHRHDVFAIHDGC
Trigger: ACACCCATCATGAATGGCAAAGACGTCGTGGCGGTGATCATGGCAGTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAAGACGAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTTTCTGCCACGTAGCTaGGAAGGCCGCTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSFLPRS*EGRWPG
Trigger: CCCTGGCCAGCGGCCTTCCAAGCTACGTGGCAGAAA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCATCGTCTGGGCCACGTaGAAGCCGTGGCGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSIVWAT*KPWRQL
Trigger: CAACTGGCGCCACGGCTTCAACGTGGCCCAGACGAT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGGAGCTCGGCCGCCTaGTTCCGGTCCATCATAGGA +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGSSAA*FRSIIG
Trigger: TCCTATGATGGACCGGAACAAGGCGGCCGAGCTCCC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp TGGGTGAAGATTGAGGGAGCCATAGGGTCCCCATGGGACCAGTGCTCACAGGATAATTTCTGTGCCTACTaGTACACGAATGTGCACACG +
Preference number: 5 (lower is better)
Translates to: WVKIEGAIGSPWDQCSQDNFCAY*YTNVHT
Trigger: CGTGTGCACATTCGTGTACAAGTAGGCACAGAAATT...ATCCTGTGAGCACTGGTCCCATGGGGACCCTATGGCTCCCTCAATCTTCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS TCA 90 bp CTCTCTGTTTCCATGAATTCAGGGTTTTCGGATCCCACATGTGAGTaGGATCCTAGCTTTTGGCCAGTGGCATCCTCCAGGTCCATGCAC +
Preference number: 5 (lower is better)
Translates to: LSVSMNSGFSDPTCE*DPSFWPVASSRSMH
Trigger: GTGCATGGACCTGGAGGATGCCACTGGCCAAAAGCTAGGATCTCACTCACATGTGGGATCCGAAAACCCTGAATTCATGGAAACAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS CCA 90 bp ATTCAGGTACTTCAAGAACACATCTTCGTCTTCGCTGGTGAAGAATaGGCCGTTGAGCTTGTTCACTGCCATGATCACCGCCACGACGTC +
Preference number: 5 (lower is better)
Translates to: IQVLQEHIFVFAGEE*AVELVHCHDHRHDV
Trigger: GACGTCGTGGCGGTGATCATGGCAGTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAAGACGAAGATGTGTTCTTGAAGTACCTGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGGCGCCGCAGGACCTaGAAGACCACGCGCTCCATG +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSRRRRT*KTTRSM
Trigger: CATGGAGCGCGTGGTCTTCAAGGTCCTGCGGCGCCT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCACGAGAAGTGCGACCTaGCTCTGGACTTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSTRSAT*LWTSQG
Trigger: GCCCTGGGAAGTCCAGAGCAAGGTCGCACTTCTCGT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAAGCCCACTTGCAGCTaGGGGAGCTCGGCCGCCTTG +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSKPTCS*GSSAAL
Trigger: CAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCAGCAGGTTGAAGACTaGGGTGCTGGGCCGCCATTG +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSQQVED*GAGPPL
Trigger: CAATGGCGGCCCAGCACCCAAGTCTTCAACCTGCTG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAGGCGCCGCAGGACCTaGAAGACCACGCGCTCCATG +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVRRRRT*KTTRSM
Trigger: CATGGAGCGCGTGGTCTTCAAGGTCCTGCGGCGCCT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGTGTGGGAATGACCTaGATCTCCTCCTTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGVGMT*ISSLPW
Trigger: CCACGGCAAGGAGGAGATCAAGGTCATTCCCACACC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTTTCTGCCACGTAGCTaGGAAGGCCGCTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSFLPRS*EGRWPG
Trigger: CCCTGGCCAGCGGCCTTCCAAGCTACGTGGCAGAAA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGTCGATGAAGCCCACTaGCAGCTTGGGGAGCTCGGC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSVDEAH*QLGELG
Trigger: GCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGAC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCACCACGCGCTCCATGTaGATGCTCTCCTGCATATCC +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSTTRSM*MLSCIS
Trigger: GGATATGCAGGAGAGCATCAACATGGAGCGCGTGGT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCATGGACAGCACATTCTaGATGAGCCACCCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSMDSTF*MSHPES
Trigger: CGACTCCGGGTGGCTCATCAAGAATGTGCTGTCCAT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAATCGTCTGGGCCACGTaGAAGCCGTGGCGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVIVWAT*KPWRQL
Trigger: CAACTGGCGCCACGGCTTCAACGTGGCCCAGACGAT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTACGAGAAGTGCGACCTaGCTCTGGACTTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSTRSAT*LWTSQG
Trigger: GCCCTGGGAAGTCCAGAGCAAGGTCGCACTTCTCGT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCCCTTTCCAAGTCACCTaGCTCCCAGAACTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSPFQVT*LPELSS
Trigger: GCTGCTGAGTTCTGGGAGCAAGGTGACTTGGAAAGG...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGTCGATGAAGCCCACTaGCAGCTTGGGGAGCTCGGC +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVVDEAH*QLGELG
Trigger: GCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGAC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGGTGCTGGGCCGCCATaGCAAATTTCTGTGCCTACT +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSGAGPP*QISVPT
Trigger: AGTAGGCACAGAAATTTGCAATGGCGGCCCAGCACC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496514.6
CDS CCA 90 bp CGCAGTTGTGGAGGTAGCTCAGGTGATAGATCTTCAGGTACAACGTaGCAAAATTCAGGTACTTCAAGAACACATCTTCGTCTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: RSCGGSSGDRSSGTT*QNSGTSRTHLRLRW
Trigger: CCAGCGAAGACGAAGATGTGTTCTTGAAGTACCTGAATTTTGCCACGTTGTACCTGAAGATCTATCACCTGAGCTACCTCCACAACTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCGTGAAGAATGGGCCGTaGAGCTTGTTCACTGCCATG +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSVKNGP*SLFTAM
Trigger: CATGGCAGTGAACAAGCTCAACGGCCCATTCTTCAC...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTCCTCAAACACCTTGTaGGCCGACCACAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSSNTL*ADHSST
Trigger: GGTGCTGCTGTGGTCGGCCAACAAGGTGTTTGAGGA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGCTCCTCAAACACCTaGTTGGCCGACCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSSSNT*LADHSS
Trigger: GCTGCTGTGGTCGGCCAACAAGGTGTTTGAGGAGCT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGGTGTGGGAATGACCTaGATCTCCTCCTTGCCGTGG +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSGVGMT*ISSLPW
Trigger: CCACGGCAAGGAGGAGATCAAGGTCATTCCCACACC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCATCTGGATGCCACATTaGACCAGGTCCAGTTCGGTG +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSIWMPH*TRSSSV
Trigger: CACCGAACTGGACCTGGTCAAATGTGGCATCCAGAT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTATCTGGTACAGGTTGTaGGTGCCGCGGTGGTCGATG +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSIWYRL*VPRWSM
Trigger: CATCGACCACCGCGGCACCAACAACCTGTACCAGAT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCAACATCGCTCTCTTCTaGAAGTACAGGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSNIALF*KYRARS
Trigger: GGACCTGGCCCTGTACTTCAAGAAGAGAGCGATGTT...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTACAGCAGGTTGAAGACTaGGGTGCTGGGCCGCCATTG +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVQQVED*GAGPPL
Trigger: CAATGGCGGCCCAGCACCCAAGTCTTCAACCTGCTG...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAGGCACGAGAATCGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSRHENR*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCGATTCTCGTGCCT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTCTGTGCCTACTTTCTaGGCTGCCACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSVPTF*AATLSS
Trigger: GGAGGAGAGGGTGGCAGCCAAGAAAGTAGGCACAGA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTACCACGCGCTCCATGTaGATGCTCTCCTGCATATCC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSTTRSM*MLSCIS
Trigger: GGATATGCAGGAGAGCATCAACATGGAGCGCGTGGT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATCCTCAAACACCTTGTaGGCCGACCACAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSSNTL*ADHSST
Trigger: GGTGCTGCTGTGGTCGGCCAACAAGGTGTTTGAGGA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAGCTCCTCAAACACCTaGTTGGCCGACCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSSSNT*LADHSS
Trigger: GCTGCTGTGGTCGGCCAACAAGGTGTTTGAGGAGCT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTCCTGTGCGATGTCCTaGCGGTTCTCCAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSSCAMS*RFSSLF
Trigger: GAACAAGCTGGAGAACCGCAAGGACATCGCACAGGA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTCCTTTCCAAGTCACCTaGCTCCCAGAACTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSPFQVT*LPELSS
Trigger: GCTGCTGAGTTCTGGGAGCAAGGTGACTTGGAAAGG...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTATTTCTGTGCCTTTCTaGGCTGCCACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSISVPF*AATLSS
Trigger: GGAGGAGAGGGTGGCAGCCAAGAAAGGCACAGAAAT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255622.10
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTGGTGCTGGGCCGCCATaGCAAATTTCTGTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSGAGPP*QISVPF
Trigger: GAAAGGCACAGAAATTTGCAATGGCGGCCCAGCACC...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255622.10
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAGGCACGAGAATCGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVRHENR*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGCGATTCTCGTGCCT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAACCGCCACGACGTCTTaGCCATTCATGATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVTATTS*PFMMGV
Trigger: CACACCCATCATGAATGGCAAAGACGTCGTGGCGGT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAATGGACAGCACATTCTaGATGAGCCACCCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVMDSTF*MSHPES
Trigger: CGACTCCGGGTGGCTCATCAAGAATGTGCTGTCCAT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTATCCTGTGCGATGTCCTaGCGGTTCTCCAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVSCAMS*RFSSLF
Trigger: GAACAAGCTGGAGAACCGCAAGGACATCGCACAGGA...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTAACATCGCTCTCTTCTaGAAGTACAGGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSNIALF*KYRARS
Trigger: GGACCTGGCCCTGTACTTCAAGAAGAGAGCGATGTT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp GCTGCAAATGTTCTCAGTGATTTCAGAGTTCATGGACCCTTTTCAAAGGTCTCCTTCCACTCTTTCCTATaGTTCTGCAGTCGGTCGAAC +
Preference number: 5 (lower is better)
Translates to: AANVLSDFRVHGPFSKVSFHSFL*FCSRSN
Trigger: GTTCGACCGACTGCAGAACAATAGGAAAGAGTGGAA...GGAGACCTTTGAAAAGGGTCCATGAACTCTGAAATCACTGAGAACATTTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAACAGGATACAGCAGGTaGAAGACTTGGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVTGYSR*KTWVLG
Trigger: GCCCAGCACCCAAGTCTTCAACCTGCTGTATCCTGT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAATGGGCCGTTGAGCTaGTTCACTGCCATGATCACC +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVNGPLS*FTAMIT
Trigger: GGTGATCATGGCAGTGAACAAGCTCAACGGCCCATT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGTGAAGAATGGGCCGTaGAGCTTGTTCACTGCCATG +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVVKNGP*SLFTAM
Trigger: CATGGCAGTGAACAAGCTCAACGGCCCATTCTTCAC...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAATCTCCTCCTTCTTGTaGACGATGGGCATGGACAGC +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVISSFL*TMGMDS
Trigger: GCTGTCCATGCCCATCGTCAACAAGAAGGAGGAGAT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTACAATCTCCTCCTTCTaGTTGACGATGGGCATGGAC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSTISSF*LTMGMD
Trigger: GTCCATGCCCATCGTCAACAAGAAGGAGGAGATTGT...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAATCTGGATGCCACATTaGACCAGGTCCAGTTCGGTG +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVIWMPH*TRSSSV
Trigger: CACCGAACTGGACCTGGTCAAATGTGGCATCCAGAT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAACAATCTCCTCCTTCTaGTTGACGATGGGCATGGAC +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVTISSF*LTMGMD
Trigger: GTCCATGCCCATCGTCAACAAGAAGGAGGAGATTGT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp AAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAGGCTACAGTTTCCACTCTTTCCTATaGTTCTGCAGTCGGTCGAAC +
Preference number: 5 (lower is better)
Translates to: KGLPVVTIQKWMSNVGYSFHSFL*FCSRSN
Trigger: GTTCGACCGACTGCAGAACAATAGGAAAGAGTGGAA...ACTGTAGCCTACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS-3UTR CAA 90 bp ACCCTTTTCAAAGGTCTCCCAGTGGTAACTATCCAAAAATGGATGAGTAATGTAAAACGAGAGAACTCCTaGTACACGAATGTGCACACG +
Preference number: 5 (lower is better)
Translates to: TLFKGLPVVTIQKWMSNVKRENS*YTNVHT
Trigger: CGTGTGCACATTCGTGTACAAGGAGTTCTCTCGTTT...TACATTACTCATCCATTTTTGGATAGTTACCACTGGGAGACCTTTGAAAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CCA 72 bp ACATCGGGCCGTGGTTTCCGCACGTCAGGCCGCCTGTaGCCTCCGCCAAGCGTCCCAGGGCCCTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: TSGRGFRTSGRL*PPPSVPGPSLG
Trigger: GCCCAAGGAGGGCCCTGGGACGCTTGGCGGAGGCCACAGGCGGCCTGACGTGCGGAAACCACGGCCCGATGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS CCA 72 bp CACCAGGCCCTGCCTCCTCACACTCGCGGCGGCCGCTaGGTCTTCTACCGCATGGTGCCAGCTCCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: HQALPPHTRGGR*VFYRMVPAPSP
Trigger: AGGAGAGGGAGCTGGCACCATGCGGTAGAAGACCCAGCGGCCGCCGCGAGTGTGAGGAGGCAGGGCCTGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429163.6
ENST00000488061.5
CDS CCA 72 bp CGACCAGCCTGGCGGCCCTCATTCAGGGACCAGCCCTaGACACCCCATCCCTGGAGTGCAGCAGCAGGGGAG +
Preference number: 6 (lower is better)
Translates to: RPAWRPSFRDQP*TPHPWSAAAGE
Trigger: CTCCCCTGCTGCTGCACTCCAGGGATGGGGTGTCCAGGGCTGGTCCCTGAATGAGGGCCGCCAGGCTGGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS CCA 72 bp ACCTGCGGCGAGCAGGGCTTTGAGAACATCGGGCCGTaGTTTCCGCACGTCAGGCCGCCTGTGGCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: TCGEQGFENIGP*FPHVRPPVASA
Trigger: GGCGGAGGCCACAGGCGGCCTGACGTGCGGAAACCACGGCCCGATGTTCTCAAAGCCCTGCTCGCCGCAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS GCA 72 bp CCCGGAGTCGTCCAGGGCCCCTTCAAAGCCGCTTTCTaGCACGTAGCTTGGAAGGCCGCTGGCCAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: PGVVQGPFKAAF*HVAWKAAGQGP
Trigger: TGGGCCCTGGCCAGCGGCCTTCCAAGCTACGTGGCAGAAAGCGGCTTTGAAGGGGCCCTGGACGACTCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487902.5
CDS GCA 72 bp CAAGCGTCCCAGGGCCCTCCTTGGGCCACCTTTCTCTaGCTCCTTGGTCAAGGCCCAGACCCAGGCCCCACC +
Preference number: 6 (lower is better)
Translates to: QASQGPPWATFL*LLGQGPDPGPT
Trigger: GGTGGGGCCTGGGTCTGGGCCTTGACCAAGGAGGCAGAGAAAGGTGGCCCAAGGAGGGCCCTGGGACGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS CCA 72 bp CCCTCCCCTAAGACTCACCCGGCCATCAGGCGTGCGTaGGCCCGAGTACGGCTGGGACTCTCCCATCAGCAC +
Preference number: 6 (lower is better)
Translates to: PSPKTHPAIRRA*ARVRLGLSHQH
Trigger: GTGCTGATGGGAGAGTCCCAGCCGTACTCGGGCCCACGCACGCCTGATGGCCGGGTGAGTCTTAGGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467152.1
ENST00000474251.5
ENST00000476034.5
CDS CCA 72 bp GGCCGACCACAGCAGCACCGAGCACCCTGTGTACTGTaGTTAACGGCAGTGGTGGCCGCCACACAGCGCGGC +
Preference number: 6 (lower is better)
Translates to: GRPQQHRAPCVL*LTAVVAATQRG
Trigger: GCCGCGCTGTGTGGCGGCCACCACTGCCGTTAACCACAGTACACAGGGTGCTCGGTGCTGCTGTGGTCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474251.5
ENST00000476034.5
CDS CAA 90 bp CGGAGTCGTCCAGGGCCCCTTCAAAGCCGCTTTCTGCCACGTAGCTaGGAAGGCCGCTGGCCAGGGCCCAGTGATCGGCTGAGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: RSRPGPLQSRFLPRS*EGRWPGPSDRLRVW
Trigger: CCACACCCTCAGCCGATCACTGGGCCCTGGCCAGCGGCCTTCCAAGCTACGTGGCAGAAAGCGGCTTTGAAGGGGCCCTGGACGACTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487902.5
CDS TCA 72 bp CGGCTGCTCCAGAACCACCTGCGGCGAGCAGGGCTTTaGGAACATCGGGCCGTGGTTTCCGCACGTCAGGCC +
Preference number: 6 (lower is better)
Translates to: RLLQNHLRRAGL*EHRAVVSARQA
Trigger: GGCCTGACGTGCGGAAACCACGGCCCGATGTTCTCAAAGCCCTGCTCGCCGCAGGTGGTTCTGGAGCAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS GCA 72 bp CAGGCAAACATCCGACCAGCCCTTCCTCCGCCCGGCTaGTCCAGAACCACCTGCGGCGAGCAGGGCTTTGAG +
Preference number: 6 (lower is better)
Translates to: QANIRPALPPPG*SRTTCGEQGFE
Trigger: CTCAAAGCCCTGCTCGCCGCAGGTGGTTCTGGAGCAGCCGGGCGGAGGAAGGGCTGGTCGGATGTTTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS CAA 72 bp CCAGGGCCCCTTCAAAGCCGCTTTCTGCCACGTAGCTaGGAAGGCCGCTGGCCAGGGCCCAGTGATCGGCTG +
Preference number: 6 (lower is better)
Translates to: PGPLQSRFLPRS*EGRWPGPSDRL
Trigger: CAGCCGATCACTGGGCCCTGGCCAGCGGCCTTCCAAGCTACGTGGCAGAAAGCGGCTTTGAAGGGGCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487902.5
CDS CAA 72 bp CCGGCTGCTCCAGAACCACCTGCGGCGAGCAGGGCTTaGAGAACATCGGGCCGTGGTTTCCGCACGTCAGGC +
Preference number: 6 (lower is better)
Translates to: PAAPEPPAASRA*RTSGRGFRTSG
Trigger: GCCTGACGTGCGGAAACCACGGCCCGATGTTCTCAAAGCCCTGCTCGCCGCAGGTGGTTCTGGAGCAGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS CCA 72 bp CACAATCAGAGCCGACGTGGGTCTTCACGACCAGCCTaGCGGCCCTCATTCAGGGACCAGCCCTGGACACCC +
Preference number: 6 (lower is better)
Translates to: HNQSRRGSSRPA*RPSFRDQPWTP
Trigger: GGGTGTCCAGGGCTGGTCCCTGAATGAGGGCCGCCAGGCTGGTCGTGAAGACCCACGTCGGCTCTGATTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS CAA 72 bp TCGGCCTGCAGGAGGGTGCAGAGGCGCCGCAGGACCTaGAAGACCACGCGCTCCATGTTGATGCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SACRRVQRRRRT*KTTRSMLMLSC
Trigger: GCAGGAGAGCATCAACATGGAGCGCGTGGTCTTCAAGGTCCTGCGGCGCCTCTGCACCCTCCTGCAGGCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CAA 90 bp CTGCAGCGGTCGGCCTGCAGGAGGGTGCAGAGGCGCCGCAGGACCTaGAAGACCACGCGCTCCATGTTGATGCTCTCCTGCATATCCTGC +
Preference number: 6 (lower is better)
Translates to: LQRSACRRVQRRRRT*KTTRSMLMLSCISC
Trigger: GCAGGATATGCAGGAGAGCATCAACATGGAGCGCGTGGTCTTCAAGGTCCTGCGGCGCCTCTGCACCCTCCTGCAGGCCGACCGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS TCA 72 bp GGTTCTGGTCCAGAAAGCTCCGGGCCTGCTCCTCACTaGGGCTCATGGTGGCTGCCTGTCCCTGGAGACGCT +
Preference number: 6 (lower is better)
Translates to: GSGPESSGPAPH*GSWWLPVPGDA
Trigger: AGCGTCTCCAGGGACAGGCAGCCACCATGAGCCTCAGTGAGGAGCAGGCCCGGAGCTTTCTGGACCAGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CCA 72 bp TCCCGGCCATCAGGCGTGCGTGGGCCCGAGTACGGCTaGGACTCTCCCATCAGCACAGACCACACGTCAAAA +
Preference number: 6 (lower is better)
Translates to: SRPSGVRGPEYG*DSPISTDHTSK
Trigger: TTTTGACGTGTGGTCTGTGCTGATGGGAGAGTCCCAGCCGTACTCGGGCCCACGCACGCCTGATGGCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000465426.5
ENST00000487902.5
ENST00000496514.6
CDS CCA 72 bp GCCAGGTCCGTGGCGATGATGGCGATGTCCATCAGGTaGATCACGTGCTCGTGCTGCCGCCGGTTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: ARSVAMMAMSIR*ITCSCCRRFRF
Trigger: GAACCTGAACCGGCGGCAGCACGAGCACGTGATCCACCTGATGGACATCGCCATCATCGCCACGGACCTGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000460119.1
ENST00000471824.6
ENST00000496514.6
CDS CCA 72 bp ACCCGGCCATCAGGCGTGCGTGGGCCCGAGTACGGCTaGGACTCTCCCATCAGCACAGACCACACGTCAAAA +
Preference number: 6 (lower is better)
Translates to: TRPSGVRGPEYG*DSPISTDHTSK
Trigger: TTTTGACGTGTGGTCTGTGCTGATGGGAGAGTCCCAGCCGTACTCGGGCCCACGCACGCCTGATGGCCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467152.1
ENST00000474251.5
ENST00000476034.5
CDS TCA 72 bp TCGGCCACGTCCTCGACGTTCACCATCTTTTTGGTCTaGGCCACGTGGCCCACGACCCCGATGTCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: SATSSTFTIFLV*ATWPTTPMSSG
Trigger: CCCACTGGACATCGGGGTCGTGGGCCACGTGGCTCAGACCAAAAAGATGGTGAACGTCGAGGACGTGGCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS TCA 72 bp TCATGTCCAGGAGGCCCACGGAGTACCGCTCGCAGTTaGGGTAGGCCCGCACCGTGTAGAAGGCCTTGTGGA +
Preference number: 6 (lower is better)
Translates to: SCPGGPRSTARS*GRPAPCRRPCG
Trigger: TCCACAAGGCCTTCTACACGGTGCGGGCCTACCTCAACTGCGAGCGGTACTCCGTGGGCCTCCTGGACATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000465426.5
ENST00000467152.1
ENST00000474251.5
ENST00000476034.5
ENST00000487902.5
ENST00000488061.5
ENST00000496514.6
CDS TCA 72 bp GCTGGCGGTGAGGCCTCGAGGCTGCGGTCGTGTCCCTaGTCACTCAGGAGTGGACGAGTGGAAAGTGGAATC +
Preference number: 6 (lower is better)
Translates to: AGGEASRLRSCP*SLRSGRVESGI
Trigger: GATTCCACTTTCCACTCGTCCACTCCTGAGTGATCAGGGACACGACCGCAGCCTCGAGGCCTCACCGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS GCA 72 bp GCAAAATCGGGGTTCTGGTCCAGAAAGCTCCGGGCCTaGTCCTCACTGAGGCTCATGGTGGCTGCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: AKSGFWSRKLRA*SSLRLMVAACP
Trigger: GGGACAGGCAGCCACCATGAGCCTCAGTGAGGAGCAGGCCCGGAGCTTTCTGGACCAGAACCCCGATTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CCA 72 bp GGCACTCGGCCACGTCCTCGACGTTCACCATCTTTTTaGTCTGAGCCACGTGGCCCACGACCCCGATGTCCA +
Preference number: 6 (lower is better)
Translates to: GTRPRPRRSPSF*SEPRGPRPRCP
Trigger: TGGACATCGGGGTCGTGGGCCACGTGGCTCAGACCAAAAAGATGGTGAACGTCGAGGACGTGGCCGAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CCA 72 bp TTGCTGATGGAGAACAGGAACCGCACCAGGACCTCCTaGGGGATCTGGAACTTTCGGACCACGCCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: LLMENRNRTRTS*GIWNFRTTPSS
Trigger: CGAGCTGGGCGTGGTCCGAAAGTTCCAGATCCCCCAGGAGGTCCTGGTGCGGTTCCTGTTCTCCATCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS CAA 90 bp ACTGTGGTTAACGGCAGTGGTGGCCGCCACACAGCGCGGCTGACCTaGAAGCCCACAGCTCCAGCTAACGAACGCTTTGCACCCTTTCAC +
Preference number: 6 (lower is better)
Translates to: TVVNGSGGRHTARLT*KPTAPANERFAPFH
Trigger: GTGAAAGGGTGCAAAGCGTTCGTTAGCTGGAGCTGTGGGCTTCAAGGTCAGCCGCGCTGTGTGGCGGCCACCACTGCCGTTAACCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS GCA 72 bp ACCTTGAAGACCACGCGCTCCATGTTGATGCTCTCCTaGATATCCTGCACCAGCTCCAGCAGCGCCGTGCTC +
Preference number: 6 (lower is better)
Translates to: TLKTTRSMLMLS*ISCTSSSSAVL
Trigger: GAGCACGGCGCTGCTGGAGCTGGTGCAGGATATGCAGGAGAGCATCAACATGGAGCGCGTGGTCTTCAAGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS GCA 72 bp TACACGAATGTGCACACGAAGTCGATGAAGCCCACTTaGAGCTTGGGGAGCTCGGCCGCCTTGTTCCGGTCC +
Preference number: 6 (lower is better)
Translates to: YTNVHTKSMKPT*SLGSSAALFRS
Trigger: GGACCGGAACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000461490.1
ENST00000471824.6
ENST00000496514.6
CDS GCA 72 bp ACTCTCACACACACACACACACACGCATCCTACACGTaGACAGGAGGTCCCACGTGGGGAGATGGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: TLTHTHTHASYT*TGGPTWGDGAA
Trigger: TGCTGCCCCATCTCCCCACGTGGGACCTCCTGTGCACGTGTAGGATGCGTGTGTGTGTGTGTGTGTGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS CCA 72 bp TTTGTAGAAGACAATTTCCCGGCCATCAGGCGTGCGTaGGCCCGAGTACGGCTGGGACTCTCCCATCAGCAC +
Preference number: 6 (lower is better)
Translates to: FVEDNFPAIRRA*ARVRLGLSHQH
Trigger: GTGCTGATGGGAGAGTCCCAGCCGTACTCGGGCCCACGCACGCCTGATGGCCGGGAAATTGTCTTCTACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000465426.5
ENST00000487902.5
ENST00000496514.6
CDS CAA 72 bp GTACACGAATGTGCACACGAAGTCGATGAAGCCCACTaGCAGCTTGGGGAGCTCGGCCGCCTTGTTCCGGTC +
Preference number: 6 (lower is better)
Translates to: VHECAHEVDEAH*QLGELGRLVPV
Trigger: GACCGGAACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000461490.1
ENST00000471824.6
ENST00000496514.6
CDS CAA 90 bp CACTCAGGAGTGGACGAGTGGAAAGTGGAATCTGTCGCTTTGAGCTaGACAGGCAAACATCCGACCAGCCCTTCCTCCGCCCGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: HSGVDEWKVESVALS*TGKHPTSPSSARLL
Trigger: GAGCAGCCGGGCGGAGGAAGGGCTGGTCGGATGTTTGCCTGTCAAGCTCAAAGCGACAGATTCCACTTTCCACTCGTCCACTCCTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS CAA 90 bp CCTGATCACTCAGGAGTGGACGAGTGGAAAGTGGAATCTGTCGCTTaGAGCTTGACAGGCAAACATCCGACCAGCCCTTCCTCCGCCCGG +
Preference number: 6 (lower is better)
Translates to: PDHSGVDEWKVESVA*SLTGKHPTSPSSAR
Trigger: CCGGGCGGAGGAAGGGCTGGTCGGATGTTTGCCTGTCAAGCTCAAAGCGACAGATTCCACTTTCCACTCGTCCACTCCTGAGTGATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS GCA 72 bp TCACTTTGTAGAAGACAATTTCCCGGCCATCAGGCGTaGGTGGGCCCGAGTACGGCTGGGACTCTCCCATCA +
Preference number: 6 (lower is better)
Translates to: SLCRRQFPGHQA*VGPSTAGTLPS
Trigger: TGATGGGAGAGTCCCAGCCGTACTCGGGCCCACGCACGCCTGATGGCCGGGAAATTGTCTTCTACAAAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000465426.5
ENST00000487902.5
ENST00000496514.6
CDS CCA 72 bp TTCTTCCCAAAGTACTGGCGGGCAAAATCGGGGTTCTaGTCCAGAAAGCTCCGGGCCTGCTCCTCACTGAGG +
Preference number: 6 (lower is better)
Translates to: FFPKYWRAKSGF*SRKLRACSSLR
Trigger: CCTCAGTGAGGAGCAGGCCCGGAGCTTTCTGGACCAGAACCCCGATTTTGCCCGCCAGTACTTTGGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CCA 72 bp GTCTCCTCCGAGAGCAGGAACTTCCCAAACTCCAGGTaGTGCCGCTCCAAAATCGAGGAGCCGTGGAGCTTA +
Preference number: 6 (lower is better)
Translates to: VSSESRNFPNSR*CRSKIEEPWSL
Trigger: TAAGCTCCACGGCTCCTCGATTTTGGAGCGGCACCACCTGGAGTTTGGGAAGTTCCTGCTCTCGGAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS CAA 72 bp ACGAGAAGTGCGACCTTGCTCTGGACTTCCCAGGGCTaGGTGATGGCAGACAGGTCGCAGGCTGTCATCATC +
Preference number: 6 (lower is better)
Translates to: TRSATLLWTSQG*VMADRSQAVII
Trigger: GATGATGACAGCCTGCGACCTGTCTGCCATCACCAAGCCCTGGGAAGTCCAGAGCAAGGTCGCACTTCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000471824.6
ENST00000496514.6
CDS CAA 90 bp TTGTACACGAATGTGCACACGAAGTCGATGAAGCCCACTTGCAGCTaGGGGAGCTCGGCCGCCTTGTTCCGGTCCATCATAGGAATGGGC +
Preference number: 6 (lower is better)
Translates to: LYTNVHTKSMKPTCS*GSSAALFRSIIGMG
Trigger: GCCCATTCCTATGATGGACCGGAACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000461490.1
ENST00000471824.6
ENST00000496514.6
CDS CAA 90 bp GAACTCCTTGTACACGAATGTGCACACGAAGTCGATGAAGCCCACTaGCAGCTTGGGGAGCTCGGCCGCCTTGTTCCGGTCCATCATAGG +
Preference number: 6 (lower is better)
Translates to: ELLVHECAHEVDEAH*QLGELGRLVPVHHR
Trigger: CCTATGATGGACCGGAACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTACAAGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000461490.1
ENST00000496514.6
CDS CAA 90 bp TGCCTACTTGTACACGAATGTGCACACGAAGTCGATGAAGCCCACTaGCAGCTTGGGGAGCTCGGCCGCCTTGTTCCGGTCCATCATAGG +
Preference number: 6 (lower is better)
Translates to: CLLVHECAHEVDEAH*QLGELGRLVPVHHR
Trigger: CCTATGATGGACCGGAACAAGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTACAAGTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471824.6
CDS TCA 72 bp AGAACTCCTTGTACACGAATGTGCACACGAAGTCGATaGAGCCCACTTGCAGCTTGGGGAGCTCGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: RTPCTRMCTRSR*SPLAAWGARPP
Trigger: AGGCGGCCGAGCTCCCCAAGCTGCAAGTGGGCTTCATCGACTTCGTGTGCACATTCGTGTACAAGGAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000461490.1
ENST00000496514.6
CDS GCA 72 bp GCCGCCATTGCAAATTTCTGTGCCTACTTTCTTGGCTaGCACCCTCTCCTCCTCCTCCTTCTCCTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: AAIANFCAYFLG*HPLLLLLLLQS
Trigger: GCTCTGGAGGAGAAGGAGGAGGAGGAGAGGGTGGCAGCCAAGAAAGTAGGCACAGAAATTTGCAATGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429163.6
ENST00000496514.6
CDS CAA 72 bp GTGGACGAGTGGAAAGTGGAATCTGTCGCTTTGAGCTaGACAGGCAAACATCCGACCAGCCCTTCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: VDEWKVESVALS*TGKHPTSPSSA
Trigger: GGCGGAGGAAGGGCTGGTCGGATGTTTGCCTGTCAAGCTCAAAGCGACAGATTCCACTTTCCACTCGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS CCA 72 bp GAAGTGGAATTCGTAGATGTCAAATGTGGTGGGCCCTaGCAGCTCCTCCTTCAGGATTTCGCCCAGCTCGTC +
Preference number: 6 (lower is better)
Translates to: EVEFVDVKCGGP*QLLLQDFAQLV
Trigger: GACGAGCTGGGCGAAATCCTGAAGGAGGAGCTGCCAGGGCCCACCACATTTGACATCTACGAATTCCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS CCA 72 bp TGCGGTCGTGTCCCTGATCACTCAGGAGTGGACGAGTaGAAAGTGGAATCTGTCGCTTTGAGCTTGACAGGC +
Preference number: 6 (lower is better)
Translates to: CGRVPDHSGVDE*KVESVALSLTG
Trigger: GCCTGTCAAGCTCAAAGCGACAGATTCCACTTTCCACTCGTCCACTCCTGAGTGATCAGGGACACGACCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS GCA 72 bp GGAAGCATTCATGATGTTACAAATAAAGCCGCTTTCTaGCACGTAGCTTGGAAGGCCGCTGGCCAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: GSIHDVTNKAAF*HVAWKAAGQGP
Trigger: TGGGCCCTGGCCAGCGGCCTTCCAAGCTACGTGGCAGAAAGCGGCTTTATTTGTAACATCATGAATGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS CCA 72 bp GCCACATTCTCAGGGCTCAGTTTCTTCCCAAAGTACTaGCGGGCAAAATCGGGGTTCTGGTCCAGAAAGCTC +
Preference number: 6 (lower is better)
Translates to: ATFSGLSFFPKY*RAKSGFWSRKL
Trigger: GAGCTTTCTGGACCAGAACCCCGATTTTGCCCGCCAGTACTTTGGGAAGAAACTGAGCCCTGAGAATGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CCA 72 bp CCAGGTCAGAGAAGTGGAATTCGTAGATGTCAAATGTaGTGGGCCCTGGCAGCTCCTCCTTCAGGATTTCGC +
Preference number: 6 (lower is better)
Translates to: PGQRSGIRRCQM*WALAAPPSGFR
Trigger: GCGAAATCCTGAAGGAGGAGCTGCCAGGGCCCACCACATTTGACATCTACGAATTCCACTTCTCTGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS CAA 72 bp TCTTCGTCTTCGCTGGTGAAGAATGGGCCGTTGAGCTaGTTCACTGCCATGATCACCGCCACGACGTCTTTG +
Preference number: 6 (lower is better)
Translates to: SSSSLVKNGPLS*FTAMITATTSL
Trigger: CAAAGACGTCGTGGCGGTGATCATGGCAGTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAAGACGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CAA 72 bp AACACATCTTCGTCTTCGCTGGTGAAGAATGGGCCGTaGAGCTTGTTCACTGCCATGATCACCGCCACGACG +
Preference number: 6 (lower is better)
Translates to: NTSSSSLVKNGP*SLFTAMITATT
Trigger: CGTCGTGGCGGTGATCATGGCAGTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAAGACGAAGATGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CAA 72 bp TCAGGAGTGGACGAGTGGAAAGTGGAATCTGTCGCTTaGAGCTTGACAGGCAAACATCCGACCAGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: SGVDEWKVESVA*SLTGKHPTSPS
Trigger: GGAAGGGCTGGTCGGATGTTTGCCTGTCAAGCTCAAAGCGACAGATTCCACTTTCCACTCGTCCACTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488061.5
CDS TCA 72 bp GGCCTCCTGCAACCCCCTTTCCACTCTCTGTTTCCATaGATTCAGGGTTTTCGGATCCCACATGTGAGTGAG +
Preference number: 6 (lower is better)
Translates to: GLLQPPFHSLFP*IQGFRIPHVSE
Trigger: CTCACTCACATGTGGGATCCGAAAACCCTGAATTCATGGAAACAGAGAGTGGAAAGGGGGTTGCAGGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS GCA 72 bp TTCGCTGGTGAAGAATGGGCCGTTGAGCTTGTTCACTaGCATGATCACCGCCACGACGTCTTTGCCATTCAT +
Preference number: 6 (lower is better)
Translates to: FAGEEWAVELVH*HDHRHDVFAIH
Trigger: ATGAATGGCAAAGACGTCGTGGCGGTGATCATGGCAGTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS GCA 72 bp CCTGTCGCACTTCACGTGGTAAAGGACCATGTCCTGTaGGATGTCCTTGCGGTTCTCCAGCTTGTTCATCTT +
Preference number: 6 (lower is better)
Translates to: PVALHVVKDHVL*DVLAVLQLVHL
Trigger: AAGATGAACAAGCTGGAGAACCGCAAGGACATCGCACAGGACATGGTCCTTTACCACGTGAAGTGCGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS CAA 90 bp AAGAACACATCTTCGTCTTCGCTGGTGAAGAATGGGCCGTTGAGCTaGTTCACTGCCATGATCACCGCCACGACGTCTTTGCCATTCATG +
Preference number: 6 (lower is better)
Translates to: KNTSSSSLVKNGPLS*FTAMITATTSLPFM
Trigger: CATGAATGGCAAAGACGTCGTGGCGGTGATCATGGCAGTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAAGACGAAGATGTGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CAA 90 bp TACTTCAAGAACACATCTTCGTCTTCGCTGGTGAAGAATGGGCCGTaGAGCTTGTTCACTGCCATGATCACCGCCACGACGTCTTTGCCA +
Preference number: 6 (lower is better)
Translates to: YFKNTSSSSLVKNGP*SLFTAMITATTSLP
Trigger: TGGCAAAGACGTCGTGGCGGTGATCATGGCAGTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAAGACGAAGATGTGTTCTTGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS TCA 72 bp TCCATGAATTCAGGGTTTTCGGATCCCACATGTGAGTaGGATCCTAGCTTTTGGCCAGTGGCATCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SMNSGFSDPTCE*DPSFWPVASSR
Trigger: CCTGGAGGATGCCACTGGCCAAAAGCTAGGATCTCACTCACATGTGGGATCCGAAAACCCTGAATTCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476034.5
CDS GCA 72 bp TCACGTGGTAAAGGACCATGTCCTGTGCGATGTCCTTaGGGTTCTCCAGCTTGTTCATCTTGTCGTAGGTGT +
Preference number: 6 (lower is better)
Translates to: SRGKGPCPVRCP*GSPACSSCRRC
Trigger: ACACCTACGACAAGATGAACAAGCTGGAGAACCGCAAGGACATCGCACAGGACATGGTCCTTTACCACGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000496514.6
CDS CCA 72 bp CTTCAAGAACACATCTTCGTCTTCGCTGGTGAAGAATaGGCCGTTGAGCTTGTTCACTGCCATGATCACCGC +
Preference number: 6 (lower is better)
Translates to: LQEHIFVFAGEE*AVELVHCHDHR
Trigger: GCGGTGATCATGGCAGTGAACAAGCTCAACGGCCCATTCTTCACCAGCGAAGACGAAGATGTGTTCTTGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6
CDS CCA 72 bp TTCTGCAGTCGGTCGAACATGGGCAGGATCTCTTCGTaGAAACGAGAGAACTCCTTGTACACGAATGTGCAC +
Preference number: 6 (lower is better)
Translates to: FCSRSNMGRISS*KRENSLYTNVH
Trigger: GTGCACATTCGTGTACAAGGAGTTCTCTCGTTTCCACGAAGAGATCCTGCCCATGTTCGACCGACTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255622.10
ENST00000429163.6
ENST00000461490.1
ENST00000496514.6
CDS CCA 72 bp GGAGGTAGCTCAGGTGATAGATCTTCAGGTACAACGTaGCAAAATTCAGGTACTTCAAGAACACATCTTCGT +
Preference number: 6 (lower is better)
Translates to: GGSSGDRSSGTT*QNSGTSRTHLR
Trigger: ACGAAGATGTGTTCTTGAAGTACCTGAATTTTGCCACGTTGTACCTGAAGATCTATCACCTGAGCTACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255622.10
ENST00000496514.6