RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE6A (Homo sapiens)

Ensembl gene IDs: ENSG00000132915

Ensembl transcript IDs: ENST00000255266.10, ENST00000508173.5, ENST00000512670.1, ENST00000613228.1, ENST00000617647.4

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACGAGGAGTCGTGGAGCTGGAACAGCCCTGCACAGTTATCCCATaGTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCATGGATCAGT +
Preference number: 1 (lower is better)
Translates to: PRGVVELEQPCTVIP*SAKMARPLHLAWIS
Trigger: ACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAGCTCCACGACTCCTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CCA 90 bp GGATGTGAGCCCAGCGACAGCCTTAGTGGACCCCACGAGGAGTCGTaGAGCTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGA +
Preference number: 1 (lower is better)
Translates to: GCEPSDSLSGPHEES*SWNSPAQLSHAQPR
Trigger: TCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAGCTCCACGACTCCTCGTGGGGTCCACTAAGGCTGTCGCTGGGCTCACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CCA 90 bp TGGAGCTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATaGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGG +
Preference number: 1 (lower is better)
Translates to: WSWNSPAQLSHAQPR*PGLSTWHGSVIGCR
Trigger: CCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR TCA 90 bp CCTATGACTCTTCTACTTCTCAAGGTGTGTGGTCTTCCACTGGCTTaGGTCATCTCTTCCCAGGAAAGGGTGGTGCCGTCCAGCCAGCAC +
Preference number: 1 (lower is better)
Translates to: PMTLLLLKVCGLPLA*VISSQERVVPSSQH
Trigger: GTGCTGGCTGGACGGCACCACCCTTTCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGTAGAAGAGTCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR CCA 90 bp AACAGCACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTaGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATT +
Preference number: 1 (lower is better)
Translates to: NSTQSWWGPKSFAEA*GLCSPSKHRSQLGI
Trigger: AATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGTGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR TCA 90 bp CAGGCAAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTaGTTAAGGGCTGGCATCACAAGTTGGGTGTCCCAGAAAGCAGAC +
Preference number: 1 (lower is better)
Translates to: QASQPLKTFMRMKEG*LRAGITSWVSQKAD
Trigger: GTCTGCTTTCTGGGACACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CCA 90 bp CTAACAGCTTTCAAATCCTATGACTCTTCTACTTCTCAAGGTGTGTaGTCTTCCACTGGCTTGAGTCATCTCTTCCCAGGAAAGGGTGGT +
Preference number: 1 (lower is better)
Translates to: LTAFKSYDSSTSQGV*SSTGLSHLFPGKGG
Trigger: ACCACCCTTTCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGTAGAAGAGTCATAGGATTTGAAAGCTGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR CCA 90 bp TCAAAGCATAGATCACAGCTGGGTATTAGGCAGGCATTGGTTGCATaGGCCAGTGATGTGGTTATGTTAGAAAACATACTTATTTCTTTA +
Preference number: 1 (lower is better)
Translates to: SKHRSQLGIRQALVA*ASDVVMLENILISL
Trigger: TAAAGAAATAAGTATGTTTTCTAACATAACCACATCACTGGCCCATGCAACCAATGCCTGCCTAATACCCAGCTGTGATCTATGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR GCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCCCAGGAAAGGGTGGTaGCGTCCAGCCAGCACATCC +
Preference number: 2 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLPRKGW*RPASTS
Trigger: GGATGTGCTGGCTGGACGGCACCACCCTTTCCTGGG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCACTTCTCAAGGTGTGTaGTCTTCCACTGGCTTGAGT +
Preference number: 2 (lower is better)
Translates to: FNPRPVGHMQPRTALNAATSQGV*SSTGLS
Trigger: ACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR TCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGGGAAGCCAAAAGATTaGACAGTCCTGGAAGCTAAA +
Preference number: 2 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAGKPKD*TVLEAK
Trigger: TTTAGCTTCCAGGACTGTTCAATCTTTTGGCTTCCC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR GCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCATGATCTCAGCTCACTaGAACTTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPMISAH*NFRLLG
Trigger: ACCCAGGAGGCGGAAGTTGCAGTGAGCTGAGATCAT...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR GCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCCCCAGGAAAGGGTGGTaGCGTCCAGCCAGCACATCC +
Preference number: 2 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGPRKGW*RPASTS
Trigger: GGATGTGCTGGCTGGACGGCACCACCCTTTCCTGGG...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR GCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCATGATCTCAGCTCACTaGAACTTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLMISAH*NFRLLG
Trigger: ACCCAGGAGGCGGAAGTTGCAGTGAGCTGAGATCAT...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCTGTGTGGTCTTCCACTaGCTTGAGTCATCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPCVVFH*LESSLP
Trigger: GGGAAGAGATGACTCAAGCCAGTGGAAGACCACACA...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCTCCTTTGCTGAAGCTTaGGGTCTGTGCAGCCCATCA +
Preference number: 2 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLSFAEA*GLCSPS
Trigger: TGATGGGCTGCACAGACCCCAAGCTTCAGCAAAGGA...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR TCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCAGCTTTCAAATCCTATaGCTCTTCTACTTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: FNPRPVGHMQPRTALNAASFQIL*LFYFSR
Trigger: CCTTGAGAAGTAGAAGAGTCATAGGATTTGAAAGCT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCACAATTCTTCCAATGTaGCCCAGGGAAGCCAAAAGA +
Preference number: 2 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGTILPM*PREAKR
Trigger: TCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGT...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCTGGGTGATGGGTATGTaGGGATTCAACGTACAATTC +
Preference number: 2 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGWVMGM*GFNVQF
Trigger: GAATTGTACGTTGAATCCCCACATACCCATCACCCA...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCAACAGCACTCAAAGCTaGTGGGGTCCCAAGTCCTTT +
Preference number: 2 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLNSTQS*WGPKSF
Trigger: AAAGGACTTGGGACCCCACCAGCTTTGAGTGCTGTT...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CAA 90 bp TCCTATGACTCTTCTACTTCTCAAGGTGTGTGGTCTTCCACTGGCTaGAGTCATCTCTTCCCAGGAAAGGGTGGTGCCGTCCAGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SYDSSTSQGVWSSTG*SHLFPGKGGAVQPA
Trigger: TGCTGGCTGGACGGCACCACCCTTTCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGTAGAAGAGTCATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR CAA 90 bp AAGGGTCTGTCAACAGCACTCAAAGCTGGTGGGGTCCCAAGTCCTTaGCTGAAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCAC +
Preference number: 2 (lower is better)
Translates to: KGLSTALKAGGVPSP*LKLGVCAAHQSIDH
Trigger: GTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGTGCTGTTGACAGACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTTCAACCCACGGCCCGTaGGCCACATGCAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGSTHGP*ATCSPG
Trigger: TCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGA...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCTTGATATTGGAATCTaGGTGATGGGTATGTGGGGA +
Preference number: 2 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLLDIGI*VMGMWG
Trigger: TCCCCACATACCCATCACCCAGATTCCAATATCAAG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCGTAGAGACAGGGTTTTaGCATTTTGCTCAGGTTGGT +
Preference number: 2 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSVETGF*HFAQVG
Trigger: ACCAACCTGAGCAAAATGGCAAAACCCTGTCTCTAC...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTaGTTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCT +
Preference number: 2 (lower is better)
Translates to: TKRMFKSHWIRYKPS*FNPRPVGHMQPRTA
Trigger: AGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCTGTGTGGTCTTCCACTaGCTTGAGTCATCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGCVVFH*LESSLP
Trigger: GGGAAGAGATGACTCAAGCCAGTGGAAGACCACACA...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR TCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCACTGTATTTTATGTGTaGCCCAAGACAATTCTTCCA +
Preference number: 2 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLTVFYV*PKTILP
Trigger: TGGAAGAATTGTCTTGGGTCACACATAAAATACAGT...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR TCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCAGTAGAGGTGTGAAATaGTATGTTTGGGATTTGCCT +
Preference number: 2 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSSRGVK*YVWDLP
Trigger: AGGCAAATCCCAAACATATCATTTCACACCTCTACT...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATCAACCCACGGCCCGTaGGCCACATGCAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKSTHGP*ATCSPG
Trigger: TCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR CAA 90 bp TTGTTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTaGAATGCGGCCCAACACAAATTCATAAACTTTCTTAAAACATTA +
Preference number: 2 (lower is better)
Translates to: LFNPRPVGHMQPRTA*NAAQHKFINFLKTL
Trigger: TAATGTTTTAAGAAAGTTTATGAATTTGTGTTGGGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACAGACTCCTGGGCTCATaGAGTCTGCCCACCTCAGCC +
Preference number: 2 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYRLLGS*SLPTSA
Trigger: GGCTGAGGTGGGCAGACTGCATGAGCCCAGGAGTCT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAAGACTCCTGGGCTCATaGAGTCTGCCCACCTCAGCC +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKRLLGS*SLPTSA
Trigger: GGCTGAGGTGGGCAGACTGCATGAGCCCAGGAGTCT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGATGTGTGGTCTTCCACTaGCTTGAGTCATCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: KTILPMWPREAKRLNSPGCVVFH*LESSLP
Trigger: GGGAAGAGATGACTCAAGCCAGTGGAAGACCACACA...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTTCCTTTGCTGAAGCTTaGGGTCTGTGCAGCCCATCA +
Preference number: 2 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGSFAEA*GLCSPS
Trigger: TGATGGGCTGCACAGACCCCAAGCTTCAGCAAAGGA...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACATGCTCAGCCAAGATaGCCAGGCCTCTCCACCTGG +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKHAQPR*PGLSTW
Trigger: CCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR TCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCAGTAGAGGTGTGAAATaGTATGTTTGGGATTTGCCT +
Preference number: 2 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGSRGVK*YVWDLP
Trigger: AGGCAAATCCCAAACATATCATTTCACACCTCTACT...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR GCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCCAGGAAAGGGTGGTaGCGTCCAGCCAGCACATCC +
Preference number: 2 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNPRKGW*RPASTS
Trigger: GGATGTGCTGGCTGGACGGCACCACCCTTTCCTGGG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATGCCCTGGGGACCGATaGTTGGGGAAGGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKCPGDR*LGKGRK
Trigger: TTTCCTTCCCTTCCCCAAGCATCGGTCCCCAGGGCA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR GCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGATGCTTATTAAGCAGTaGCCTGGGGACCGATGCTTG +
Preference number: 2 (lower is better)
Translates to: KPTIENVHENEGRLIKGWMLIKQ*PGDRCL
Trigger: CAAGCATCGGTCCCCAGGGCACTGCTTAATAAGCAT...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACTGGGGACCGATGCTTaGGGAAGGGAAGGAAATAGG +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKLGTDA*GREGNR
Trigger: CCTATTTCCTTCCCTTCCCCAAGCATCGGTCCCCAG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR GCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCAGGACGGCTTTGAATaGGGCCCAACACAAATTCAT +
Preference number: 2 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRQDGFE*GPTQIH
Trigger: ATGAATTTGTGTTGGGCCGCATTCAAAGCCGTCCTG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR GCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTGTAGAGACAGGGTTTTaGCATTTTGCTCAGGTTGGT +
Preference number: 2 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGVETGF*HFAQVG
Trigger: ACCAACCTGAGCAAAATGGCAAAACCCTGTCTCTAC...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAATGATCTCAGCTCACTaGAACTTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKMISAH*NFRLLG
Trigger: ACCCAGGAGGCGGAAGTTGCAGTGAGCTGAGATCAT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGACTTCTCAAGGTGTGTaGTCTTCCACTGGCTTGAGT +
Preference number: 2 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRTSQGV*SSTGLS
Trigger: ACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAGGCATTGGTTGCATaGGCCAGTGATGTGGTTATG +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKQALVA*ASDVVM
Trigger: CATAACCACATCACTGGCCCATGCAACCAATGCCTG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACAACAGCACTCAAAGCTaGTGGGGTCCCAAGTCCTTT +
Preference number: 2 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYNSTQS*WGPKSF
Trigger: AAAGGACTTGGGACCCCACCAGCTTTGAGTGCTGTT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAGGACGGCTTTGAATaGGGCCCAACACAAATTCAT +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKQDGFE*GPTQIH
Trigger: ATGAATTTGTGTTGGGCCGCATTCAAAGCCGTCCTG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGGGAAGCCAAAAGATTaGACAGTCCTGGAAGCTAAA +
Preference number: 2 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYGKPKD*TVLEAK
Trigger: TTTAGCTTCCAGGACTGTTCAATCTTTTGGCTTCCC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACATATTGGAATCTGGGTaGTGGGTATGTGGGGATTCA +
Preference number: 2 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYILESG*WVCGDS
Trigger: TGAATCCCCACATACCCATCACCCAGATTCCAATAT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACTCTTTTGCTTTTGTTTaGGTCAGAGTCTCGCTCGGT +
Preference number: 2 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYSFAFV*VRVSLG
Trigger: ACCGAGCGAGACTCTGACTCAAACAAAAGCAAAAGA...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR TCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATCTTTTGCTTTTGTTTaGGTCAGAGTCTCGCTCGGT +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKSFAFV*VRVSLG
Trigger: ACCGAGCGAGACTCTGACTCAAACAAAAGCAAAAGA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAACAATTCTTCCAATGTaGCCCAGGGAAGCCAAAAGA +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKTILPM*PREAKR
Trigger: TCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACTGGGTGATGGGTATGTaGGGATTCAACGTACAATTC +
Preference number: 2 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYWVMGM*GFNVQF
Trigger: GAATTGTACGTTGAATCCCCACATACCCATCACCCA...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR TCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACATGTAGCAAAATCTTaGTATTGGAATCTGGGTGAT +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKHVAKS*YWNLGD
Trigger: ATCACCCAGATTCCAATATCAAGATTTTGCTACATG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACAGCTTTCAAATCCTATaGCTCTTCTACTTCTCAAGG +
Preference number: 2 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSFQIL*LFYFSR
Trigger: CCTTGAGAAGTAGAAGAGTCATAGGATTTGAAAGCT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAAAGATTGAACAGTCCTaGAAGCTAAATTCTCTAACA +
Preference number: 2 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKKIEQS*KLNSLT
Trigger: TGTTAGAGAATTTAGCTTCCAGGACTGTTCAATCTT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACAAGATTGAACAGTCCTaGAAGCTAAATTCTCTAACA +
Preference number: 2 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNKIEQS*KLNSLT
Trigger: TGTTAGAGAATTTAGCTTCCAGGACTGTTCAATCTT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR TCA 72 bp GTGGTGCATGCCTGTGGTCACCGCTGCTTGGTAAGCTaGGATGGAGGATTGCTTGAGCCCGGGCAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: VVHACGHRCLVS*DGGLLEPGQLG
Trigger: CCCCAGCTGCCCGGGCTCAAGCAATCCTCCATCTCAGCTTACCAAGCAGCGGTGACCACAGGCATGCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCTGGTCTTCCACTGGCTaGAGTCATCTCTTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAWSSTG*SHLFPG
Trigger: TCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCA...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR GCA 72 bp GTCGTGGAGCTGGAACAGCCCTGCACAGTTATCCCATaGTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCA +
Preference number: 3 (lower is better)
Translates to: VVELEQPCTVIP*SAKMARPLHLA
Trigger: TGCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAGCTCCACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CAA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCGCCATTTTGCTCAGGTaGGTCTCAGACTCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGAILLR*VSDSWA
Trigger: AGCCCAGGAGTCTGAGACCAACCTGAGCAAAATGGC...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CAA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCTGGTCTTCCACTGGCTaGAGTCATCTCTTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGWSSTG*SHLFPG
Trigger: TCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCA...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CAA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCGGTATTAGGCAGGCATaGGTTGCATGGGCCAGTGAT +
Preference number: 3 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLGIRQA*VAWASD
Trigger: ATCACTGGCCCATGCAACCAATGCCTGCCTAATACC...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CCA 72 bp GGTTTTGCCATTTTGCTCAGGTTGGTCTCAGACTCCTaGGCTCATGCAGTCTGCCCACCTCAGCCTCCTGAA +
Preference number: 3 (lower is better)
Translates to: GFAILLRLVSDS*AHAVCPPQPPE
Trigger: TTCAGGAGGCTGAGGTGGGCAGACTGCATGAGCCCAGGAGTCTGAGACCAACCTGAGCAAAATGGCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR CCA 72 bp GGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTaGGTATTAGGCAGGCATTGGTTGCATGGGCCAGTG +
Preference number: 3 (lower is better)
Translates to: GVCAAHQSIDHS*VLGRHWLHGPV
Trigger: CACTGGCCCATGCAACCAATGCCTGCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CCA 72 bp AACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATaGCCAGGCCTCTCCACCTGGCATGGATCAGTCATT +
Preference number: 3 (lower is better)
Translates to: NSPAQLSHAQPR*PGLSTWHGSVI
Trigger: AATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR TCA 72 bp CTTCTACTTCTCAAGGTGTGTGGTCTTCCACTGGCTTaGGTCATCTCTTCCCAGGAAAGGGTGGTGCCGTCC +
Preference number: 3 (lower is better)
Translates to: LLLLKVCGLPLA*VISSQERVVPS
Trigger: GGACGGCACCACCCTTTCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGTAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR GCA 72 bp TGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTaGAGCCCATCAAAGCATAGATCACAGCTGGGTATT +
Preference number: 3 (lower is better)
Translates to: WGPKSFAEAWGL*SPSKHRSQLGI
Trigger: AATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CAA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTGGCATGGATCAGTCATaGGGTGTAGGCCACCCTGGG +
Preference number: 3 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGGMDQS*GVGHPG
Trigger: CCCAGGGTGGCCTACACCCAATGACTGATCCATGCC...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CAA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGGCCATTTTGCTCAGGTaGGTCTCAGACTCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: KPTIENVHENEGRLIKGWAILLR*VSDSWA
Trigger: AGCCCAGGAGTCTGAGACCAACCTGAGCAAAATGGC...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGTGGTCTTCCACTGGCTaGAGTCATCTCTTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRWSSTG*SHLFPG
Trigger: TCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCA...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR CCA 72 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTaGCATCACAAGTTGGGTGTCCCAGAAAGCAGACTC +
Preference number: 3 (lower is better)
Translates to: NVHENEGRLIKG*HHKLGVPESRL
Trigger: GAGTCTGCTTTCTGGGACACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CAA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCAGGGTTTTGCCATTTaGCTCAGGTTGGTCTCAGAC +
Preference number: 3 (lower is better)
Translates to: KPTIENVHENEGRLIKGWQGFAI*LRLVSD
Trigger: GTCTGAGACCAACCTGAGCAAAATGGCAAAACCCTG...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR TCA 72 bp CAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTaGTTAAGGGCTGGCATCACAAGTTGGGTGTCCCAG +
Preference number: 3 (lower is better)
Translates to: QPLKTFMRMKEG*LRAGITSWVSQ
Trigger: CTGGGACACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CCA 72 bp TTCAAATCCTATGACTCTTCTACTTCTCAAGGTGTGTaGTCTTCCACTGGCTTGAGTCATCTCTTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: FKSYDSSTSQGV*SSTGLSHLFPG
Trigger: TCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGTAGAAGAGTCATAGGATTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR CCA 72 bp AGATCACAGCTGGGTATTAGGCAGGCATTGGTTGCATaGGCCAGTGATGTGGTTATGTTAGAAAACATACTT +
Preference number: 3 (lower is better)
Translates to: RSQLGIRQALVA*ASDVVMLENIL
Trigger: AAGTATGTTTTCTAACATAACCACATCACTGGCCCATGCAACCAATGCCTGCCTAATACCCAGCTGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR-3UTR CAA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCAGGGTTTTGCCATTTaGCTCAGGTTGGTCTCAGAC +
Preference number: 3 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYQGFAI*LRLVSD
Trigger: GTCTGAGACCAACCTGAGCAAAATGGCAAAACCCTG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR-3UTR CAA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATGTAATCCCAACACTTaGGGATTTGCCTTTTCTTTT +
Preference number: 3 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKCNPNT*GFAFSF
Trigger: AAAAGAAAAGGCAAATCCCAAAGTGTTGGGATTACA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617647.4
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCCCACGGCAGCCTCCTTaGCCCCAAGGAGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAPRQPP*PQGGRR
Trigger: TCTCCGACCTCCTTGGGGCCAAGGAGGCTGCCGTGG...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCAGATGGAGGATTGCTTaGGCCCGGGCAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAARWRIA*ARAAGA
Trigger: AGCCCCAGCTGCCCGGGCTCAAGCAATCCTCCATCT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCTGCGGGTCCGGTACATaGACAGGCTCATGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAACGSGT*TGSCGL
Trigger: CAGACCGCATGAGCCTGTTCATGTACCGGACCCGCA...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCAGATGGAGGATTGCTTaGGCCCGGGCAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGRWRIA*ARAAGA
Trigger: AGCCCCAGCTGCCCGGGCTCAAGCAATCCTCCATCT...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGGACTTGGATGTAGTTaGACCCCCTGGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAGLGCS*TPWAGV
Trigger: AACCCCAGCCCAGGGGGTGCAACTACATCCAAGTCC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGGGTTTGGTGATGGCTaGGAGATCACAGGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAGFGDG*EITGGH
Trigger: ATGACCGCCTGTGATCTCTCAGCCATCACCAAACCC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCTGGCCAGCTCTGCGATaGCATTGCGGGTCCGGTACA +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGWPALR*HCGSGT
Trigger: TGTACCGGACCCGCAATGGCATCGCAGAGCTGGCCA...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCCGACATGGCCCACGATaGCCATGTCCAAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAARHGPR*PCPKGR
Trigger: TCTTCCCTTTGGACATGGGCATCGTGGGCCATGTCG...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCTCTGTTGCAGCACCGTaGGCTCCAGGTCACCTTGTT +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAASVAAP*APGHLV
Trigger: AACAAGGTGACCTGGAGCGCACGGTGCTGCAACAGA...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCTTAGAGTGTGCGACATaGCCCACGATGCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAALECAT*PTMPMS
Trigger: GGACATGGGCATCGTGGGCCATGTCGCACACTCTAA...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCAGGGAGAAGTCGAGTTaGGATGTGAGCCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAREKSS*DVSPAT
Trigger: TGTCGCTGGGCTCACATCCCAACTCGACTTCTCCCT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGGGAGTGGTAGTTGCTaGAGTCCACGGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPGSGSC*SPRQPP
Trigger: AGGAGGCTGCCGTGGACTTCAGCAACTACCACTCCC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCCGCTCTCCTCCATGCTaGTCGGGGAGTGGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPRSPPC*SGSGSC
Trigger: GCAACTACCACTCCCCGAGCAGCATGGAGGAGAGCG...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCCAGGCTCATGCGGTCTaGCTGCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPQAHAV*LQEEAQ
Trigger: CTGTGCTTCCTCCTGCAGGCAGACCGCATGAGCCTG...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCATGATCTCAGCTCACTaGAACTTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAMISAH*NFRLLG
Trigger: ACCCAGGAGGCGGAAGTTGCAGTGAGCTGAGATCAT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGGCTGGGAATCCCACTaGCTACTCTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAGWESH*LLCRRT
Trigger: AGTCCTTCTACAGAGTAGCCAGTGGGATTCCCAGCC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGACCACAGCAGTATCTaGCCACGTCGAGTTTCACAG +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAADHSSI*PRRVSQ
Trigger: CTGTGAAACTCGACGTGGCCAGATACTGCTGTGGTC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255266.10
3UTR CAA 72 bp GATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATaGGGTGTAGGCCACCCTGGGGAAGGCTGCAGTAAC +
Preference number: 4 (lower is better)
Translates to: DGQASPPGMDQS*GVGHPGEGCSN
Trigger: GTTACTGCAGCCTTCCCCAGGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCTACTCAGGGAGTACATaGACCGCACCAGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGYSGST*TAPGPL
Trigger: AAGAGGCCCTGGTGCGGTTCATGTACTCCCTGAGTA...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCAGGCCTCTAGGTCCGTaGAGTAGCGCTTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGRPLGP*SSASAF
Trigger: GAAAGCTGAAGCGCTACTTCACGGACCTAGAGGCCT...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCCGTCCAACATTGGGGTaGTCTCCTCGTGGAAACGGG +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPRPTLG*SPRGNG
Trigger: CCCGTTTCCACGAGGAGATCACCCCAATGTTGGACG...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCTTGAAGTCAGGAGTTTaGGGCCAGCCTGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGLKSGV*GQPGQQ
Trigger: CTGTTGCCCAGGCTGGCCTCAAACTCCTGACTTCAA...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCCTATGGTATGAATGCTaGTCAGGCCAGTGCATTCCG +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAALWYEC*SGQCIP
Trigger: CGGAATGCACTGGCCTGATCAGCATTCATACCATAG...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCGCTCTCCTCCATGCTaGTCGGGGAGTGGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLRSPPC*SGSGSC
Trigger: GCAACTACCACTCCCCGAGCAGCATGGAGGAGAGCG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGGAATGGGATTCTGTTaGAGCACCGTGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPGMGFC*STVRSR
Trigger: CCTGGAGCGCACGGTGCTGCAACAGAATCCCATTCC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCCCAGGAAAGGGTGGTaGCGTCCAGCCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSPRKGW*RPASTS
Trigger: GGATGTGCTGGCTGGACGGCACCACCCTTTCCTGGG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCTGCCCTGGGGACCGATaGTTGGGGAAGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPCPGDR*LGKGRK
Trigger: TTTCCTTCCCTTCCCCAAGCATCGGTCCCCAGGGCA...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCACGGAGGCCTTCCAATaGCAGTTTTGCAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAATEAFQ*QFCSLQ
Trigger: TTGCAGACTGCAAAACTGCCATTGGAAGGCCTCCGT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCTGTCACCTCGCCCATaGCTGGGAATCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLLSPRP*LGIPLA
Trigger: AGCCAGTGGGATTCCCAGCCATGGGCGAGGTGACAG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCTTAGAGTGTGCGACATaGCCCACGATGCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGLECAT*PTMPMS
Trigger: GGACATGGGCATCGTGGGCCATGTCGCACACTCTAA...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGTGTACAGGGCTTTGTaGAACTGTCGTTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAVYRAL*NCRSMS
Trigger: GGACATCGAACGACAGTTCCACAAAGCCCTGTACAC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCACCAGCAGAGCTACCTaGCTCTGCACCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLTSRAT*LCTSQG
Trigger: ACCCTGGGAGGTGCAGAGCCAGGTAGCTCTGCTGGT...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCCTCCCAGGGTTTGGTaGTGGCTGAGAGATCACAGG +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLPPRVW*WLRDHR
Trigger: CCTGTGATCTCTCAGCCATCACCAAACCCTGGGAGG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCCCTTGCGATTGTTGGTaGTCCCGTCCAACATTGGGG +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPPCDCW*SRPTLG
Trigger: CCCCAATGTTGGACGGGATCACCAACAATCGCAAGG...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCCGCTGCTTGGTAAGCTaGGATGGAGGATTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGRCLVS*DGGLLE
Trigger: CTCAAGCAATCCTCCATCTCAGCTTACCAAGCAGCG...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCTTCTCCACCTCCTCTaGTGTCACCTCGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSLLHLL*CHLAHG
Trigger: GCCATGGGCGAGGTGACAGCAGAGGAGGTGGAGAAG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCAGGCTCATGCGGTCTaGCTGCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSQAHAV*LQEEAQ
Trigger: CTGTGCTTCCTCCTGCAGGCAGACCGCATGAGCCTG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCGCTGACTTGGCCGACTaGTGTTTCTGCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGADLAD*CFCFFS
Trigger: GGAGAAGAAGCAGAAACAGCAGTCGGCCAAGTCAGC...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCAGACTCCTGGGCTCATaGAGTCTGCCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSRLLGS*SLPTSA
Trigger: GGCTGAGGTGGGCAGACTGCATGAGCCCAGGAGTCT...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCTGTCACCTCGCCCATaGCTGGGAATCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSLSPRP*LGIPLA
Trigger: AGCCAGTGGGATTCCCAGCCATGGGCGAGGTGACAG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCTGCGGCTGCTGACTTaGCCGACTGCTGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLLRLLT*PTAVSA
Trigger: AGCAGAAACAGCAGTCGGCCAAGTCAGCAGCCGCAG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCAGGGAGAAGTCGAGTTaGGATGTGAGCCCAGCGACA +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPREKSS*DVSPAT
Trigger: TGTCGCTGGGCTCACATCCCAACTCGACTTCTCCCT...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCCATCCTTGTGGACATTaGAAAGCCTGGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPHPCGH*KAWWPA
Trigger: AGCTGGCCACCAGGCTTTTCAATGTCCACAAGGATG...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCGACCAGCCCAGAAATTaGGTCAAAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGDQPRN*VKDSMS
Trigger: GCTCATGGAGTCTTTGACTCAATTTCTGGGCTGGTC...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCTCAGGCTCTCGTCTCTaGGCAGTGTTTTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGSGSRL*AVFCQT
Trigger: AGTTTGGCAAAACACTGCTCAGAGACGAGAGCCTGA...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCGGGTTTGGTGATGGCTaGGAGATCACAGGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLGFGDG*EITGGH
Trigger: ATGACCGCCTGTGATCTCTCAGCCATCACCAAACCC...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCGGCAGTTTTGCAGTCTaGAACAAGTCCAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGGSFAV*NKSSLD
Trigger: GTCCAGACTGGACTTGTTGCAGACTGCAAAACTGCC...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCGACATGGCCCACGATaGCCATGTCCAAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLRHGPR*PCPKGR
Trigger: TCTTCCCTTTGGACATGGGCATCGTGGGCCATGTCG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCTGCCCTGGGGACCGATaGTTGGGGAAGGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSCPGDR*LGKGRK
Trigger: TTTCCTTCCCTTCCCCAAGCATCGGTCCCCAGGGCA...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCCAGTCTGGACTTCTCTaGGTCTTGTCTGCAAAACAT +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAQSGLL*VLSAKH
Trigger: ATGTTTTGCAGACAAGACCCAGAGAAGTCCAGACTG...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCTTCCATCCGGAGTCCTaGGACCAGAGTAAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPFHPES*DQSKVE
Trigger: TTCCACCTTACTCTGGTCCCAGGACTCCGGATGGAA...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCCACCAGGGCCTCTTGTaGAATGTGAAATTTATCCAC +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAHQGLL*NVKFIH
Trigger: GTGGATAAATTTCACATTCCACAAGAGGCCCTGGTG...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCATGGAGCTTGGCCAGTaGGTTCTGGGATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGMELGQ*VLGFHL
Trigger: CAGATGAAATCCCAGAACCCACTGGCCAAGCTCCAT...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCTGGGTGATGGGTATGTaGGGATTCAACGTACAATTC +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAWVMGM*GFNVQF
Trigger: GAATTGTACGTTGAATCCCCACATACCCATCACCCA...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCCAGGCATTGGTTGCATaGGCCAGTGATGTGGTTATG +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGQALVA*ASDVVM
Trigger: CATAACCACATCACTGGCCCATGCAACCAATGCCTG...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGGCAGTTTTGCAGTCTaGAACAAGTCCAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPGSFAV*NKSSLD
Trigger: GTCCAGACTGGACTTGTTGCAGACTGCAAAACTGCC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCTTTCGCTCTCCTCCATaGTGCTCGGGGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSFRSPP*CSGSGS
Trigger: ACTACCACTCCCCGAGCAGCATGGAGGAGAGCGAAA...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCGACATGGCCCACGATaGCCATGTCCAAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSRHGPR*PCPKGR
Trigger: TCTTCCCTTTGGACATGGGCATCGTGGGCCATGTCG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCAATCTTCTTAGAGTGTaGGACATGGCCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPNLLRV*DMAHDA
Trigger: GGCATCGTGGGCCATGTCGCACACTCTAAGAAGATT...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCACAAAGTCACAGAAATaGTCATCCTCCTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAATKSQK*SSSSVL
Trigger: CAACACAGAGGAGGATGAGCATTTCTGTGACTTTGT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR CCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCACGGAGGCCTTCCAATaGCAGTTTTGCAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPTEAFQ*QFCSLQ
Trigger: TTGCAGACTGCAAAACTGCCATTGGAAGGCCTCCGT...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCTCTCTCTTGGTGAAGTaGGATCCATCCACTTTATTC +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAASLLVK*DPSTLF
Trigger: GAATAAAGTGGATGGATCCCACTTCACCAAGAGAGA...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR CCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGTGTACAGGGCTTTGTaGAACTGTCGTTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPVYRAL*NCRSMS
Trigger: GGACATCGAACGACAGTTCCACAAAGCCCTGTACAC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCTGTCCATCATGGGAATaGGATTCTGTTGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPCPSWE*DSVAAP
Trigger: CGGTGCTGCAACAGAATCCCATTCCCATGATGGACA...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCAACAGCACTCAAAGCTaGTGGGGTCCCAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPNSTQS*WGPKSF
Trigger: AAAGGACTTGGGACCCCACCAGCTTTGAGTGCTGTT...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCTCATATGTCTTAGACTaGTCCACGATCTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAASYVLD*STIFWN
Trigger: GTTCCAAAAGATCGTGGATCAGTCTAAGACATATGA...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCGGGAAGCCAAAAGATTaGACAGTCCTGGAAGCTAAA +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGGKPKD*TVLEAK
Trigger: TTTAGCTTCCAGGACTGTTCAATCTTTTGGCTTCCC...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCAGAATGAAGGAAGGTTaGTTAAGGGCTGGCATCACA +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGRMKEG*LRAGIT
Trigger: TGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCT...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCTGGCCAGCTCTGCGATaGCATTGCGGGTCCGGTACA +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGWPALR*HCGSGT
Trigger: TGTACCGGACCCGCAATGGCATCGCAGAGCTGGCCA...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGGGCATGGTGGTGCATaGCTGTGGTCACCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGGHGGA*LWSPLL
Trigger: AAGCAGCGGTGACCACAGGCATGCACCACCATGCCC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCCAGTCTGGACTTCTCTaGGTCTTGTCTGCAAAACAT +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGQSGLL*VLSAKH
Trigger: ATGTTTTGCAGACAAGACCCAGAGAAGTCCAGACTG...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCGCAACAAGTCCAGTCTaGACTTCTCTGGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLATSPV*TSLGLV
Trigger: GACAAGACCCAGAGAAGTCCAGACTGGACTTGTTGC...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCCACCTCGCCCATGGCTaGGAATCCCACTGGCTACTC +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGHLAHG*ESHWLL
Trigger: GAGTAGCCAGTGGGATTCCCAGCCATGGGCGAGGTG...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGGTTGTAGTACTGTTTaGCAAAGCCAATATTCGAGT +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAGCSTV*QSQYSS
Trigger: ACTCGAATATTGGCTTTGCCAAACAGTACTACAACC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCAGGACAGCATCCTTGTaGACATTGAAAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPRTASL*TLKSLV
Trigger: CACCAGGCTTTTCAATGTCCACAAGGATGCTGTCCT...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCACCAGCAGAGCTACCTaGCTCTGCACCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGTSRAT*LCTSQG
Trigger: ACCCTGGGAGGTGCAGAGCCAGGTAGCTCTGCTGGT...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCCTTGATATTGGAATCTaGGTGATGGGTATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGLDIGI*VMGMWG
Trigger: TCCCCACATACCCATCACCCAGATTCCAATATCAAG...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CAA 72 bp CCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTaGAATGCGGCCCAACACAAATTCATAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: PRPVGHMQPRTA*NAAQHKFINFL
Trigger: AAGAAAGTTTATGAATTTGTGTTGGGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
3UTR CAA 72 bp TCAACAGCACTCAAAGCTGGTGGGGTCCCAAGTCCTTaGCTGAAGCTTGGGGTCTGTGCAGCCCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: STALKAGGVPSP*LKLGVCAAHQS
Trigger: GCTTTGATGGGCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGTGCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCCGTCCAACATTGGGGTaGTCTCCTCGTGGAAACGGG +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGRPTLG*SPRGNG
Trigger: CCCGTTTCCACGAGGAGATCACCCCAATGTTGGACG...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCACTGTATTTTATGTGTaGCCCAAGACAATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAATVFYV*PKTILP
Trigger: TGGAAGAATTGTCTTGGGTCACACATAAAATACAGT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGGAATGGGATTCTGTTaGAGCACCGTGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGGMGFC*STVRSR
Trigger: CCTGGAGCGCACGGTGCTGCAACAGAATCCCATTCC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGTAGAGACAGGGTTTTaGCATTTTGCTCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPVETGF*HFAQVG
Trigger: ACCAACCTGAGCAAAATGGCAAAACCCTGTCTCTAC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCATGCTTATTAAGCAGTaGCCTGGGGACCGATGCTTG +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSMLIKQ*PGDRCL
Trigger: CAAGCATCGGTCCCCAGGGCACTGCTTAATAAGCAT...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCAAAATGGACTTAGTCTaGAGGATGCTTATTAAGCAG +
Preference number: 4 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAKMDLV*RMLIKQ
Trigger: CTGCTTAATAAGCATCCTGCAGACTAAGTCCATTTT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCGTATTTATCTGCATCTaGCAGCTCCGCTTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLVFICI*QLRLQD
Trigger: ATCCTGCAAGCGGAGCTGCCAGATGCAGATAAATAC...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCTGTTTCTGTCCATCATaGGAATGGGATTCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGCFCPS*EWDSVA
Trigger: TGCAACAGAATCCCATTCCCATGATGGACAGAAACA...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCACTTCTCAAGGTGTGTaGTCTTCCACTGGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLTSQGV*SSTGLS
Trigger: ACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGT...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGCCAGTTGTGGTAGGTaGTCTTGCGGTAGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGASCGR*SCGSPY
Trigger: GTAAGGGCTACCGCAAGATCACCTACCACAACTGGC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCGAGGTCTGTGGCAATaGTTGCAATGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSRGLWQ*LQCPSC
Trigger: ACATGATGGACATTGCAATCATTGCCACAGACCTCG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGAGGAATGTGTTACATaGGGCCACAAAGAAACAAAC +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPEECVT*GHKETN
Trigger: GTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCAGGACAGCATCCTTGTaGACATTGAAAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSRTASL*TLKSLV
Trigger: CACCAGGCTTTTCAATGTCCACAAGGATGCTGTCCT...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCCAATGGTCAGGAGGTaGATTCGGGATGACTTTGAT +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSPMVRR*IRDDFD
Trigger: ATCAAAGTCATCCCGAATCCACCTCCTGACCATTGG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCCTGGGGACCGATGCTTaGGGAAGGGAAGGAAATAGG +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGLGTDA*GREGNR
Trigger: CCTATTTCCTTCCCTTCCCCAAGCATCGGTCCCCAG...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CAA 72 bp ATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTaGTTCAACCCACGGCCCGTGGGCCACATGCAGCCC +
Preference number: 4 (lower is better)
Translates to: MFKSHWIRYKPS*FNPRPVGHMQP
Trigger: GGGCTGCATGTGGCCCACGGGCCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGACAAGGAGGTCGGAGATaGGCTTGGCCCGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGQGGRR*AWPGSG
Trigger: TCCACTACCGGGCCAAGCTCATCTCCGACCTCCTTG...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCGACGATTGAGGTTTTaGAAGATATTCAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSRRLRF*KIFRLS
Trigger: CGAGAGCCTGAATATCTTTCAAAACCTCAATCGTCG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCTCAATGAAGCCGACTTaGAGCTTAGGGAGTTCATCT +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSSMKPT*SLGSSS
Trigger: AGATGAACTCCCTAAGCTTCAAGTCGGCTTCATTGA...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCCATGTAGCAAAATCTTaGTATTGGAATCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGHVAKS*YWNLGD
Trigger: ATCACCCAGATTCCAATATCAAGATTTTGCTACATG...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCTCAGTTACTATGGTATaGATGCTGATCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSSVTMV*MLIRPV
Trigger: CACTGGCCTGATCAGCATTCATACCATAGTAACTGA...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCATTTCCTTCCGTGTCTaGTCCAGCATCATGTACTGT +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSISFRV*SSIMYC
Trigger: ACAGTACATGATGCTGGAGCAGACACGGAAGGAAAT...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTCCCAGGAAAGGGTGGTaGCGTCCAGCCAGCACATCC +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGPRKGW*RPASTS
Trigger: GGATGTGCTGGCTGGACGGCACCACCCTTTCCTGGG...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAAGACTCCTGGGCTCATaGAGTCTGCCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGRLLGS*SLPTSA
Trigger: GGCTGAGGTGGGCAGACTGCATGAGCCCAGGAGTCT...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCAAAATGGACTTAGTCTaGAGGATGCTTATTAAGCAG +
Preference number: 4 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGKMDLV*RMLIKQ
Trigger: CTGCTTAATAAGCATCCTGCAGACTAAGTCCATTTT...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGACACCTCGCCCATGGCTaGGAATCCCACTGGCTACTC +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGHLAHG*ESHWLL
Trigger: GAGTAGCCAGTGGGATTCCCAGCCATGGGCGAGGTG...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCCACGGCAGCCTCCTTaGCCCCAAGGAGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRPRQPP*PQGGRR
Trigger: TCTCCGACCTCCTTGGGGCCAAGGAGGCTGCCGTGG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCACCAGGGCCTCTTGTaGAATGTGAAATTTATCCAC +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSHQGLL*NVKFIH
Trigger: GTGGATAAATTTCACATTCCACAAGAGGCCCTGGTG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCAAGATAGAGGACCCATaGAGCTTGGCCAGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGKIEDP*SLASGF
Trigger: GAACCCACTGGCCAAGCTCCATGGGTCCTCTATCTT...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGGGGTGATCTCCTCGTaGAAACGGGAGAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGGVISS*KRENSL
Trigger: CAAGGAATTCTCCCGTTTCCACGAGGAGATCACCCC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGATCCCGTCCAACATTaGGGTGATCTCCTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGDPVQH*GDLLVE
Trigger: TTCCACGAGGAGATCACCCCAATGTTGGACGGGATC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCCCCCAGTGGTGTTACTaGATGCAGCAGGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGPQWCY*MQQDLD
Trigger: ATCCAAGTCCTGCTGCATCCAGTAACACCACTGGGG...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCACAATTCTTCCAATGTaGCCCAGGGAAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSTILPM*PREAKR
Trigger: TCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGT...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGTCAACCCACGGCCCGTaGGCCACATGCAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRSTHGP*ATCSPG
Trigger: TCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGA...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTCAAGGAGGTCGGAGATaGGCTTGGCCCGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGQGGRR*AWPGSG
Trigger: TCCACTACCGGGCCAAGCTCATCTCCGACCTCCTTG...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCATGCTGTCGACGATTaGGGTTTTGAAAGATATTCA +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLHAVDD*GFERYS
Trigger: TGAATATCTTTCAAAACCTCAATCGTCGACAGCATG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCAGCTTTCAAATCCTATaGCTCTTCTACTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLSFQIL*LFYFSR
Trigger: CCTTGAGAAGTAGAAGAGTCATAGGATTTGAAAGCT...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCACTGTATTTTATGTGTaGCCCAAGACAATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPTVFYV*PKTILP
Trigger: TGGAAGAATTGTCTTGGGTCACACATAAAATACAGT...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCAGTAGAGGTGTGAAATaGTATGTTTGGGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLSRGVK*YVWDLP
Trigger: AGGCAAATCCCAAACATATCATTTCACACCTCTACT...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCGTCTGTGGCAATGATTaGAATGTCCATCATGTGGAT +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSVCGND*NVHHVD
Trigger: ATCCACATGATGGACATTGCAATCATTGCCACAGAC...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCAAGGAGGTCGGAGATaGGCTTGGCCCGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRQGGRR*AWPGSG
Trigger: TCCACTACCGGGCCAAGCTCATCTCCGACCTCCTTG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGTCTGTAAATTCTCCTaGAAGTCCCGCAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGVCKFS*KSRRRS
Trigger: TGATCTCCTGCGGGACTTTCAGGAGAATTTACAGAC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCTTGTCACACTTCACATaGTATTTTACTATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLLSHFT*YFTMSW
Trigger: CCAGGACATAGTAAAATATCATGTGAAGTGTGACAA...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAAGGCCTCTAGGTCCGTaGAGTAGCGCTTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGRPLGP*SSASAF
Trigger: GAAAGCTGAAGCGCTACTTCACGGACCTAGAGGCCT...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCTCATATGTCTTAGACTaGTCCACGATCTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSSYVLD*STIFWN
Trigger: GTTCCAAAAGATCGTGGATCAGTCTAAGACATATGA...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGGGTTTGGTGATGGCTaGGAGATCACAGGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGGFGDG*EITGGH
Trigger: ATGACCGCCTGTGATCTCTCAGCCATCACCAAACCC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCGTCCATTTATTAGAATaGGACAGAGGAATGTGTTAC +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLVHLLE*DRGMCY
Trigger: GTAACACATTCCTCTGTCTCATTCTAATAAATGGAC...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCTTCTCCACCTCCTCTaGTGTCACCTCGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRLLHLL*CHLAHG
Trigger: GCCATGGGCGAGGTGACAGCAGAGGAGGTGGAGAAG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACCTGGTGGCCAGCTCTaGGATGCCATTGCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKPGGQL*DAIAGP
Trigger: CGGACCCGCAATGGCATCGCAGAGCTGGCCACCAGG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCCTGGTGGCCAGCTCTaGGATGCCATTGCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYPGGQL*DAIAGP
Trigger: CGGACCCGCAATGGCATCGCAGAGCTGGCCACCAGG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCATCATGTGGATGGCATaGTCATGCTGTCGACGATTG +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGIMWMA*SCCRRL
Trigger: CAATCGTCGACAGCATGAGCATGCCATCCACATGAT...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACCACGGCAGCCTCCTTaGCCCCAAGGAGGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKPRQPP*PQGGRR
Trigger: TCTCCGACCTCCTTGGGGCCAAGGAGGCTGCCGTGG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCATGCTCAGCCAAGATaGCCAGGCCTCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRHAQPR*PGLSTW
Trigger: CCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCATATGTGAATTTGTTTaGATCAGATTCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLICEFV*IRFRQA
Trigger: GGCTTGCCTGAATCTGATCCAAACAAATTCACATAT...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTGCCAGTTGTGGTAGGTaGTCTTGCGGTAGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGASCGR*SCGSPY
Trigger: GTAAGGGCTACCGCAAGATCACCTACCACAACTGGC...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCCTCCCAGGGTTTGGTaGTGGCTGAGAGATCACAGG +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRPPRVW*WLRDHR
Trigger: CCTGTGATCTCTCAGCCATCACCAAACCCTGGGAGG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCGTCCAACATTGGGGTaGTCTCCTCGTGGAAACGGG +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRRPTLG*SPRGNG
Trigger: CCCGTTTCCACGAGGAGATCACCCCAATGTTGGACG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCAGCTGGGGCTCCAGTaGGCTATGGTCATACCACTG +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWQLGLQ*AMVIPL
Trigger: CAGTGGTATGACCATAGCTCACTGGAGCCCCAGCTG...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGGGACTTGGATGTAGTTaGACCCCCTGGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWGLGCS*TPWAGV
Trigger: AACCCCAGCCCAGGGGGTGCAACTACATCCAAGTCC...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGTAGAGACAGGGTTTTaGCATTTTGCTCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGVETGF*HFAQVG
Trigger: ACCAACCTGAGCAAAATGGCAAAACCCTGTCTCTAC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGGGGTGATCTCCTCGTaGAAACGGGAGAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGGVISS*KRENSL
Trigger: CAAGGAATTCTCCCGTTTCCACGAGGAGATCACCCC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCTGCGGCTGCTGACTTaGCCGACTGCTGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRLRLLT*PTAVSA
Trigger: AGCAGAAACAGCAGTCGGCCAAGTCAGCAGCCGCAG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGACCCCAGTGGTGTTACTaGATGCAGCAGGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGPQWCY*MQQDLD
Trigger: ATCCAAGTCCTGCTGCATCCAGTAACACCACTGGGG...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGCAGGAGATCAAAGATaGTTTCGCTCTCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGAGDQR*FRSPPC
Trigger: GCATGGAGGAGAGCGAAATCATCTTTGATCTCCTGC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGCCTCTTGTGGAATGTaGAATTTATCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGASCGM*NLSTTL
Trigger: CAAAGTGGTGGATAAATTTCACATTCCACAAGAGGC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGTACTCAGGGAGTACATaGACCGCACCAGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRYSGST*TAPGPL
Trigger: AAGAGGCCCTGGTGCGGTTCATGTACTCCCTGAGTA...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACTTCTCCACCTCCTCTaGTGTCACCTCGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKLLHLL*CHLAHG
Trigger: GCCATGGGCGAGGTGACAGCAGAGGAGGTGGAGAAG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCAGGCTCATGCGGTCTaGCTGCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYQAHAV*LQEEAQ
Trigger: CTGTGCTTCCTCCTGCAGGCAGACCGCATGAGCCTG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACTGGCCAGCTCTGCGATaGCATTGCGGGTCCGGTACA +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYWPALR*HCGSGT
Trigger: TGTACCGGACCCGCAATGGCATCGCAGAGCTGGCCA...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCTGGTGGCCAGCTCTaGGATGCCATTGCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNPGGQL*DAIAGP
Trigger: CGGACCCGCAATGGCATCGCAGAGCTGGCCACCAGG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGAAGCTTGGGGTCTGTaGAGCCCATCAAAGCATAGA +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGEAWGL*SPSKHR
Trigger: TCTATGCTTTGATGGGCTGCACAGACCCCAAGCTTC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAATGCTTATTAAGCAGTaGCCTGGGGACCGATGCTTG +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGMLIKQ*PGDRCL
Trigger: CAAGCATCGGTCCCCAGGGCACTGCTTAATAAGCAT...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGGGCATGGTGGTGCATaGCTGTGGTCACCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYGHGGA*LWSPLL
Trigger: AAGCAGCGGTGACCACAGGCATGCACCACCATGCCC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACTGTCACCTCGCCCATaGCTGGGAATCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKLSPRP*LGIPLA
Trigger: AGCCAGTGGGATTCCCAGCCATGGGCGAGGTGACAG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGTTAGAGTGTGCGACATaGCCCACGATGCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRLECAT*PTMPMS
Trigger: GGACATGGGCATCGTGGGCCATGTCGCACACTCTAA...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGGGACCAGAGTAAGGTaGAACTTCACCCATCAGAAC +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGGTRVR*NFTHQN
Trigger: GTTCTGATGGGTGAAGTTCCACCTTACTCTGGTCCC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTTTCCATCCGGAGTCCTaGGACCAGAGTAAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGFHPES*DQSKVE
Trigger: TTCCACCTTACTCTGGTCCCAGGACTCCGGATGGAA...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAATGGAGCTTGGCCAGTaGGTTCTGGGATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGMELGQ*VLGFHL
Trigger: CAGATGAAATCCCAGAACCCACTGGCCAAGCTCCAT...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAACCAGCAGAGCTACCTaGCTCTGCACCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKTSRAT*LCTSQG
Trigger: ACCCTGGGAGGTGCAGAGCCAGGTAGCTCTGCTGGT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTCAACCCACGGCCCGTaGGCCACATGCAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSTHGP*ATCSPG
Trigger: TCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAAGTATCTGTCACAGTTaGGGAAAGCACGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGSICHS*GKHGLC
Trigger: ACACAGTCCGTGCTTTCCTCAACTGTGACAGATACT...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCCGCAGGCGCATTCATaGTGTTGCAAATCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRPQAHS*CCKSGH
Trigger: ATGGCCTGATTTGCAACATCATGAATGCGCCTGCGG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCCTCCCAGGGTTTGGTaGTGGCTGAGAGATCACAGG +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYPPRVW*WLRDHR
Trigger: CCTGTGATCTCTCAGCCATCACCAAACCCTGGGAGG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCAGCTGGGGCTCCAGTaGGCTATGGTCATACCACTG +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYQLGLQ*AMVIPL
Trigger: CAGTGGTATGACCATAGCTCACTGGAGCCCCAGCTG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTCTATGGTATGAATGCTaGTCAGGCCAGTGCATTCCG +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGLWYEC*SGQCIP
Trigger: CGGAATGCACTGGCCTGATCAGCATTCATACCATAG...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTAATCTTCTTAGAGTGTaGGACATGGCCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGNLLRV*DMAHDA
Trigger: GGCATCGTGGGCCATGTCGCACACTCTAAGAAGATT...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAGGAATGGGATTCTGTTaGAGCACCGTGCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKGMGFC*STVRSR
Trigger: CCTGGAGCGCACGGTGCTGCAACAGAATCCCATTCC...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGGACTTGGATGTAGTTaGACCCCCTGGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYGLGCS*TPWAGV
Trigger: AACCCCAGCCCAGGGGGTGCAACTACATCCAAGTCC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGACAGGACGGCTTTGAATaGGGCCCAACACAAATTCAT +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGQDGFE*GPTQIH
Trigger: ATGAATTTGTGTTGGGCCGCATTCAAAGCCGTCCTG...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGATGATCTCAGCTCACTaGAACTTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRMISAH*NFRLLG
Trigger: ACCCAGGAGGCGGAAGTTGCAGTGAGCTGAGATCAT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTCTTACTAAAGCCCAATaGTCAGGAGGTGGATTCGGG +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGLTKAQ*SGGGFG
Trigger: CCCGAATCCACCTCCTGACCATTGGGCTTTAGTAAG...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCTGCGGCTGCTGACTTaGCCGACTGCTGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYLRLLT*PTAVSA
Trigger: AGCAGAAACAGCAGTCGGCCAAGTCAGCAGCCGCAG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGTCCTTTGCTGAAGCTTaGGGTCTGTGCAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWSFAEA*GLCSPS
Trigger: TGATGGGCTGCACAGACCCCAAGCTTCAGCAAAGGA...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAGGTGGTGCATGCCTGTaGTCACCGCTGCTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKGGACL*SPLLGK
Trigger: CTTACCAAGCAGCGGTGACCACAGGCATGCACCACC...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGGGAGTGGTAGTTGCTaGAGTCCACGGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNGSGSC*SPRQPP
Trigger: AGGAGGCTGCCGTGGACTTCAGCAACTACCACTCCC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGGCAGGAGATCAAAGATaGTTTCGCTCTCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRAGDQR*FRSPPC
Trigger: GCATGGAGGAGAGCGAAATCATCTTTGATCTCCTGC...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTGCGGGTCCGGTACATaGACAGGCTCATGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNCGSGT*TGSCGL
Trigger: CAGACCGCATGAGCCTGTTCATGTACCGGACCCGCA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGAGTCAAAGACTCCATaGGCGTCTCATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGESKTP*ASHPFH
Trigger: ATGAAATGGATGAGACGCTCATGGAGTCTTTGACTC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGGACCAGCCCAGAAATTaGGTCAAAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRDQPRN*VKDSMS
Trigger: GCTCATGGAGTCTTTGACTCAATTTCTGGGCTGGTC...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACAGGCCTCTAGGTCCGTaGAGTAGCGCTTCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYRPLGP*SSASAF
Trigger: GAAAGCTGAAGCGCTACTTCACGGACCTAGAGGCCT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCCTTGCGATTGTTGGTaGTCCCGTCCAACATTGGGG +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYPCDCW*SRPTLG
Trigger: CCCCAATGTTGGACGGGATCACCAACAATCGCAAGG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAATATTGGAATCTGGGTaGTGGGTATGTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGILESG*WVCGDS
Trigger: TGAATCCCCACATACCCATCACCCAGATTCCAATAT...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGATCTTTTGCTTTTGTTTaGGTCAGAGTCTCGCTCGGT +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGSFAFV*VRVSLG
Trigger: ACCGAGCGAGACTCTGACTCAAACAAAAGCAAAAGA...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGATCAGTTACTATGGTATaGATGCTGATCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGSVTMV*MLIRPV
Trigger: CACTGGCCTGATCAGCATTCATACCATAGTAACTGA...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCGCTCTCCTCCATGCTaGTCGGGGAGTGGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNRSPPC*SGSGSC
Trigger: GCAACTACCACTCCCCGAGCAGCATGGAGGAGAGCG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATTTCGCTCTCCTCCATaGTGCTCGGGGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKFRSPP*CSGSGS
Trigger: ACTACCACTCCCCGAGCAGCATGGAGGAGAGCGAAA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGTTCTTCAAAGACTTTaGTCCCAGACCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGVLQRL*SQTTAV
Trigger: TACTGCTGTGGTCTGGGAGCAAAGTCTTTGAAGAAC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTTGGATGGCATGCTCATaGTGTCGACGATTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGWMACS*CRRLRF
Trigger: AAACCTCAATCGTCGACAGCATGAGCATGCCATCCA...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAATTTCCTTCCGTGTCTaGTCCAGCATCATGTACTGT +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGISFRV*SSIMYC
Trigger: ACAGTACATGATGCTGGAGCAGACACGGAAGGAAAT...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATCTGTTGCAGCACCGTaGGCTCCAGGTCACCTTGTT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKSVAAP*APGHLV
Trigger: AACAAGGTGACCTGGAGCGCACGGTGCTGCAACAGA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACAGACTCCTGGGCTCATaGAGTCTGCCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNRLLGS*SLPTSA
Trigger: GGCTGAGGTGGGCAGACTGCATGAGCCCAGGAGTCT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCACCTCGCCCATGGCTaGGAATCCCACTGGCTACTC +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNHLAHG*ESHWLL
Trigger: GAGTAGCCAGTGGGATTCCCAGCCATGGGCGAGGTG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGGGGACCAGAGTAAGGTaGAACTTCACCCATCAGAAC +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRGTRVR*NFTHQN
Trigger: GTTCTGATGGGTGAAGTTCCACCTTACTCTGGTCCC...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTCCAATGGTCAGGAGGTaGATTCGGGATGACTTTGAT +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGPMVRR*IRDDFD
Trigger: ATCAAAGTCATCCCGAATCCACCTCCTGACCATTGG...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCTCCCATACACCTCTCTaGTTTTCAAGATTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGSHTPL*FSRFSE
Trigger: TTCAGAAAATCTTGAAAACCAGAGAGGTGTATGGGA...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTGTATTTATCTGCATCTaGCAGCTCCGCTTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGVFICI*QLRLQD
Trigger: ATCCTGCAAGCGGAGCTGCCAGATGCAGATAAATAC...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGTGTCCATCATGGGAATaGGATTCTGTTGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWCPSWE*DSVAAP
Trigger: CGGTGCTGCAACAGAATCCCATTCCCATGATGGACA...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACCAGCACATCCCCAGTaGTGTTACTGGATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKPAHPQ*CYWMQQ
Trigger: CTGCTGCATCCAGTAACACCACTGGGGATGTGCTGG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTACTTCTCAAGGTGTGTaGTCTTCCACTGGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGTSQGV*SSTGLS
Trigger: ACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGT...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGATGGGTGATGGGTATGTaGGGATTCAACGTACAATTC +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGWVMGM*GFNVQF
Trigger: GAATTGTACGTTGAATCCCCACATACCCATCACCCA...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCAGGCATTGGTTGCATaGGCCAGTGATGTGGTTATG +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRQALVA*ASDVVM
Trigger: CATAACCACATCACTGGCCCATGCAACCAATGCCTG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGAACAGCACTCAAAGCTaGTGGGGTCCCAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWNSTQS*WGPKSF
Trigger: AAAGGACTTGGGACCCCACCAGCTTTGAGTGCTGTT...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCATGCTCAGCCAAGATaGCCAGGCCTCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNHAQPR*PGLSTW
Trigger: CCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
3UTR CAA 72 bp TCAAAGCATAGATCACAGCTGGGTATTAGGCAGGCATaGGTTGCATGGGCCAGTGATGTGGTTATGTTAGAA +
Preference number: 4 (lower is better)
Translates to: SKHRSQLGIRQA*VAWASDVVMLE
Trigger: TTCTAACATAACCACATCACTGGCCCATGCAACCAATGCCTGCCTAATACCCAGCTGTGATCTATGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCATCCTTGTGGACATTaGAAAGCCTGGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYHPCGH*KAWWPA
Trigger: AGCTGGCCACCAGGCTTTTCAATGTCCACAAGGATG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGTGGTCTTGTACTCTGTaGGGATGTCCACAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWWSCTL*GCPQSH
Trigger: GTGACTTTGTGGACATCCTCACAGAGTACAAGACCA...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGAGTATCTGTCACAGTTaGGGAAAGCACGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRSICHS*GKHGLC
Trigger: ACACAGTCCGTGCTTTCCTCAACTGTGACAGATACT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACCGCAGGCGCATTCATaGTGTTGCAAATCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKPQAHS*CCKSGH
Trigger: ATGGCCTGATTTGCAACATCATGAATGCGCCTGCGG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTGAGTCAAAGACTCCATaGGCGTCTCATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGESKTP*ASHPFH
Trigger: ATGAAATGGATGAGACGCTCATGGAGTCTTTGACTC...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGCCTCTTGTGGAATGTaGAATTTATCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGASCGM*NLSTTL
Trigger: CAAAGTGGTGGATAAATTTCACATTCCACAAGAGGC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCGAGGTCTGTGGCAATaGTTGCAATGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRRGLWQ*LQCPSC
Trigger: ACATGATGGACATTGCAATCATTGCCACAGACCTCG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAAGTGAGACCTCGTCATaGAAGATAGAGAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGSETSS*KIEKER
Trigger: TCTCTCTTTCTCTATCTTTCATGACGAGGTCTCACT...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCGCTGCTTGGTAAGCTaGGATGGAGGATTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYRCLVS*DGGLLE
Trigger: CTCAAGCAATCCTCCATCTCAGCTTACCAAGCAGCG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTTTCCAATGGCAGTTTTaGAGTCTGCAACAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGFQWQF*SLQQVQ
Trigger: CTGGACTTGTTGCAGACTGCAAAACTGCCATTGGAA...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGATCATGTGGATGGCATaGTCATGCTGTCGACGATTG +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWIMWMA*SCCRRL
Trigger: CAATCGTCGACAGCATGAGCATGCCATCCACATGAT...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGTCTGTGGCAATGATTaGAATGTCCATCATGTGGAT +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGVCGND*NVHHVD
Trigger: ATCCACATGATGGACATTGCAATCATTGCCACAGAC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAGCTGACTTGGCCGACTaGTGTTTCTGCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKADLAD*CFCFFS
Trigger: GGAGAAGAAGCAGAAACAGCAGTCGGCCAAGTCAGC...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAGGCTGGGAATCCCACTaGCTACTCTGTAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKGWESH*LLCRRT
Trigger: AGTCCTTCTACAGAGTAGCCAGTGGGATTCCCAGCC...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACAAGATAGAGGACCCATaGAGCTTGGCCAGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYKIEDP*SLASGF
Trigger: GAACCCACTGGCCAAGCTCCATGGGTCCTCTATCTT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGGGGTGATCTCCTCGTaGAAACGGGAGAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYGVISS*KRENSL
Trigger: CAAGGAATTCTCCCGTTTCCACGAGGAGATCACCCC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCCCCAGTGGTGTTACTaGATGCAGCAGGACTTGGAT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYPQWCY*MQQDLD
Trigger: ATCCAAGTCCTGCTGCATCCAGTAACACCACTGGGG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCAAGATTGAACAGTCCTaGAAGCTAAATTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGKIEQS*KLNSLT
Trigger: TGTTAGAGAATTTAGCTTCCAGGACTGTTCAATCTT...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGCTGGCATCACAAGTTaGGTGTCCCAGAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYAGITS*VSQKAD
Trigger: GTCTGCTTTCTGGGACACCCAACTTGTGATGCCAGC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGGTGGTGCATGCCTGTaGTCACCGCTGCTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNGGACL*SPLLGK
Trigger: CTTACCAAGCAGCGGTGACCACAGGCATGCACCACC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGGAGTCAAAGACTCCATaGGCGTCTCATCCATTTCAT +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWESKTP*ASHPFH
Trigger: ATGAAATGGATGAGACGCTCATGGAGTCTTTGACTC...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTGCCTCTTGTGGAATGTaGAATTTATCCACCACTTTG +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGASCGM*NLSTTL
Trigger: CAAAGTGGTGGATAAATTTCACATTCCACAAGAGGC...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGCCAGTTGTGGTAGGTaGTCTTGCGGTAGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNASCGR*SCGSPY
Trigger: GTAAGGGCTACCGCAAGATCACCTACCACAACTGGC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATCAGGCTCTCGTCTCTaGGCAGTGTTTTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKSGSRL*AVFCQT
Trigger: AGTTTGGCAAAACACTGCTCAGAGACGAGAGCCTGA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGTCAATGAAGCCGACTTaGAGCTTAGGGAGTTCATCT +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRSMKPT*SLGSSS
Trigger: AGATGAACTCCCTAAGCTTCAAGTCGGCTTCATTGA...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGATATTGGAATCTGGGTaGTGGGTATGTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRILESG*WVCGDS
Trigger: TGAATCCCCACATACCCATCACCCAGATTCCAATAT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCTATGGTATGAATGCTaGTCAGGCCAGTGCATTCCG +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYLWYEC*SGQCIP
Trigger: CGGAATGCACTGGCCTGATCAGCATTCATACCATAG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGGCAGTTTTGCAGTCTaGAACAAGTCCAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYGSFAV*NKSSLD
Trigger: GTCCAGACTGGACTTGTTGCAGACTGCAAAACTGCC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACAATCTTCTTAGAGTGTaGGACATGGCCCACGATGCC +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYNLLRV*DMAHDA
Trigger: GGCATCGTGGGCCATGTCGCACACTCTAAGAAGATT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTCTGTTGCAGCACCGTaGGCTCCAGGTCACCTTGTT +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSVAAP*APGHLV
Trigger: AACAAGGTGACCTGGAGCGCACGGTGCTGCAACAGA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCAGTCTGGACTTCTCTaGGTCTTGTCTGCAAAACAT +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRQSGLL*VLSAKH
Trigger: ATGTTTTGCAGACAAGACCCAGAGAAGTCCAGACTG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAGCAACAAGTCCAGTCTaGACTTCTCTGGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKATSPV*TSLGLV
Trigger: GACAAGACCCAGAGAAGTCCAGACTGGACTTGTTGC...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACACGGAGGCCTTCCAATaGCAGTTTTGCAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYTEAFQ*QFCSLQ
Trigger: TTGCAGACTGCAAAACTGCCATTGGAAGGCCTCCGT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGGTTGTAGTACTGTTTaGCAAAGCCAATATTCGAGT +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGGCSTV*QSQYSS
Trigger: ACTCGAATATTGGCTTTGCCAAACAGTACTACAACC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACTTACTAAAGCCCAATaGTCAGGAGGTGGATTCGGG +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKLTKAQ*SGGGFG
Trigger: CCCGAATCCACCTCCTGACCATTGGGCTTTAGTAAG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTTGTTTCTGTCCATCATaGGAATGGGATTCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGCFCPS*EWDSVA
Trigger: TGCAACAGAATCCCATTCCCATGATGGACAGAAACA...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCAGCACATCCCCAGTaGTGTTACTGGATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNPAHPQ*CYWMQQ
Trigger: CTGCTGCATCCAGTAACACCACTGGGGATGTGCTGG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGACAATTCTTCCAATGTaGCCCAGGGAAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRTILPM*PREAKR
Trigger: TCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGTGGGTGATGGGTATGTaGGGATTCAACGTACAATTC +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRWVMGM*GFNVQF
Trigger: GAATTGTACGTTGAATCCCCACATACCCATCACCCA...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCTTGATATTGGAATCTaGGTGATGGGTATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWLDIGI*VMGMWG
Trigger: TCCCCACATACCCATCACCCAGATTCCAATATCAAG...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCTTGATATTGGAATCTaGGTGATGGGTATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRLDIGI*VMGMWG
Trigger: TCCCCACATACCCATCACCCAGATTCCAATATCAAG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCTGGGGACCGATGCTTaGGGAAGGGAAGGAAATAGG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNLGTDA*GREGNR
Trigger: CCTATTTCCTTCCCTTCCCCAAGCATCGGTCCCCAG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAGTCTGTAAATTCTCCTaGAAGTCCCGCAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKVCKFS*KSRRRS
Trigger: TGATCTCCTGCGGGACTTTCAGGAGAATTTACAGAC...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCATCCTTGTGGACATTaGAAAGCCTGGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNHPCGH*KAWWPA
Trigger: AGCTGGCCACCAGGCTTTTCAATGTCCACAAGGATG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTCATGCTGTCGACGATTaGGGTTTTGAAAGATATTCA +
Preference number: 4 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGHAVDD*GFERYS
Trigger: TGAATATCTTTCAAAACCTCAATCGTCGACAGCATG...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCGAGGTCTGTGGCAATaGTTGCAATGTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYRGLWQ*LQCPSC
Trigger: ACATGATGGACATTGCAATCATTGCCACAGACCTCG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGAATTTCGTATTTATCTaGATCTGGCAGCTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWNFVFI*IWQLRL
Trigger: CAAGCGGAGCTGCCAGATGCAGATAAATACGAAATT...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATGGATGGCATGCTCATaGTGTCGACGATTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKWMACS*CRRLRF
Trigger: AAACCTCAATCGTCGACAGCATGAGCATGCCATCCA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAATCATGTGGATGGCATaGTCATGCTGTCGACGATTG +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKIMWMA*SCCRRL
Trigger: CAATCGTCGACAGCATGAGCATGCCATCCACATGAT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGCTGACTTGGCCGACTaGTGTTTCTGCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNADLAD*CFCFFS
Trigger: GGAGAAGAAGCAGAAACAGCAGTCGGCCAAGTCAGC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGGAGGAATGTGTTACATaGGGCCACAAAGAAACAAAC +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPREECVT*GHKETN
Trigger: GTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTC...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTTCCATCCGGAGTCCTaGGACCAGAGTAAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNFHPES*DQSKVE
Trigger: TTCCACCTTACTCTGGTCCCAGGACTCCGGATGGAA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCCAATGGTCAGGAGGTaGATTCGGGATGACTTTGAT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYPMVRR*IRDDFD
Trigger: ATCAAAGTCATCCCGAATCCACCTCCTGACCATTGG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGTATTTATCTGCATCTaGCAGCTCCGCTTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYVFICI*QLRLQD
Trigger: ATCCTGCAAGCGGAGCTGCCAGATGCAGATAAATAC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACAAGATAGAGGACCCATaGAGCTTGGCCAGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNKIEDP*SLASGF
Trigger: GAACCCACTGGCCAAGCTCCATGGGTCCTCTATCTT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGTTGCCAAACTCCAAGTaGTGTCTTTCCAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWLPNSK*CLSKIE
Trigger: CTCTATCTTGGAAAGACACCACTTGGAGTTTGGCAA...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGTGTTTCTGTCCATCATaGGAATGGGATTCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRCFCPS*EWDSVA
Trigger: TGCAACAGAATCCCATTCCCATGATGGACAGAAACA...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGATCCCGTCCAACATTaGGGTGATCTCCTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNDPVQH*GDLLVE
Trigger: TTCCACGAGGAGATCACCCCAATGTTGGACGGGATC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACACTTCTCAAGGTGTGTaGTCTTCCACTGGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYTSQGV*SSTGLS
Trigger: ACTCAAGCCAGTGGAAGACCACACACCTTGAGAAGT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTCCTTTGCTGAAGCTTaGGGTCTGTGCAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSFAEA*GLCSPS
Trigger: TGATGGGCTGCACAGACCCCAAGCTTCAGCAAAGGA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGCTGGCATCACAAGTTaGGTGTCCCAGAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNAGITS*VSQKAD
Trigger: GTCTGCTTTCTGGGACACCCAACTTGTGATGCCAGC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CCA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGTAATCCCAACACTTTaGGATTTGCCTTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: KTILPMWPREAKRLNSPGVIPTL*DLPFLL
Trigger: CAAAAGAAAAGGCAAATCCCAAAGTGTTGGGATTAC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617647.4
CDS-3UTR TCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACTTTATTCACAGCCATaGTTATGGCCACCACATCCT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKLYSQP*LWPPHP
Trigger: AGGATGTGGTGGCCATAATCATGGCTGTGAATAAAG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGACCAGCCCAGAAATTaGGTCAAAGACTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNDQPRN*VKDSMS
Trigger: GCTCATGGAGTCTTTGACTCAATTTCTGGGCTGGTC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTCAGGCTCTCGTCTCTaGGCAGTGTTTTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSGSRL*AVFCQT
Trigger: AGTTTGGCAAAACACTGCTCAGAGACGAGAGCCTGA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCGACGATTGAGGTTTTaGAAGATATTCAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYRRLRF*KIFRLS
Trigger: CGAGAGCCTGAATATCTTTCAAAACCTCAATCGTCG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGAGCTTTCAAATCCTATaGCTCTTCTACTTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWSFQIL*LFYFSR
Trigger: CCTTGAGAAGTAGAAGAGTCATAGGATTTGAAAGCT...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGTAGAGACAGGGTTTTaGCATTTTGCTCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYVETGF*HFAQVG
Trigger: ACCAACCTGAGCAAAATGGCAAAACCCTGTCTCTAC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACCTTCCCATTCATTATaGGGGAAGCCAAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKPSHSL*GKPRCS
Trigger: AGAACATCTTGGCTTCCCCCATAATGAATGGGAAGG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACATGGAGCTTGGCCAGTaGGTTCTGGGATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNMELGQ*VLGFHL
Trigger: CAGATGAAATCCCAGAACCCACTGGCCAAGCTCCAT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTGTCCATCATGGGAATaGGATTCTGTTGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNCPSWE*DSVAAP
Trigger: CGGTGCTGCAACAGAATCCCATTCCCATGATGGACA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGTCTGTAAATTCTCCTaGAAGTCCCGCAGGAGATCA +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNVCKFS*KSRRRS
Trigger: TGATCTCCTGCGGGACTTTCAGGAGAATTTACAGAC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGTTGTCACACTTCACATaGTATTTTACTATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWLSHFT*YFTMSW
Trigger: CCAGGACATAGTAAAATATCATGTGAAGTGTGACAA...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGACTGTATTTTATGTGTaGCCCAAGACAATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWTVFYV*PKTILP
Trigger: TGGAAGAATTGTCTTGGGTCACACATAAAATACAGT...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAAATTTCGTATTTATCTaGATCTGGCAGCTCCGCTTG +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKNFVFI*IWQLRL
Trigger: CAAGCGGAGCTGCCAGATGCAGATAAATACGAAATT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAGTCTGTGGCAATGATTaGAATGTCCATCATGTGGAT +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKVCGND*NVHHVD
Trigger: ATCCACATGATGGACATTGCAATCATTGCCACAGAC...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGAGGAATGTGTTACATaGGGCCACAAAGAAACAAAC +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYEECVT*GHKETN
Trigger: GTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACAGGACAGCATCCTTGTaGACATTGAAAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNRTASL*TLKSLV
Trigger: CACCAGGCTTTTCAATGTCCACAAGGATGCTGTCCT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATTGCCAAACTCCAAGTaGTGTCTTTCCAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKLPNSK*CLSKIE
Trigger: CTCTATCTTGGAAAGACACCACTTGGAGTTTGGCAA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGATATGTGAATTTGTTTaGATCAGATTCAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: KPTIENVHENEGRLIKGWICEFV*IRFRQA
Trigger: GGCTTGCCTGAATCTGATCCAAACAAATTCACATAT...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR TCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACATGCTGTCGACGATTaGGGTTTTGAAAGATATTCA +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKHAVDD*GFERYS
Trigger: TGAATATCTTTCAAAACCTCAATCGTCGACAGCATG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACTCATATGTCTTAGACTaGTCCACGATCTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYSYVLD*STIFWN
Trigger: GTTCCAAAAGATCGTGGATCAGTCTAAGACATATGA...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTCAATGAAGCCGACTTaGAGCTTAGGGAGTTCATCT +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSMKPT*SLGSSS
Trigger: AGATGAACTCCCTAAGCTTCAAGTCGGCTTCATTGA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACATATTGGAATCTGGGTaGTGGGTATGTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNILESG*WVCGDS
Trigger: TGAATCCCCACATACCCATCACCCAGATTCCAATAT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTCAGTTACTATGGTATaGATGCTGATCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSVTMV*MLIRPV
Trigger: CACTGGCCTGATCAGCATTCATACCATAGTAACTGA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTTCCAATGGCAGTTTTaGAGTCTGCAACAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNFQWQF*SLQQVQ
Trigger: CTGGACTTGTTGCAGACTGCAAAACTGCCATTGGAA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR GCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGTTCTTCAAAGACTTTaGTCCCAGACCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNVLQRL*SQTTAV
Trigger: TACTGCTGTGGTCTGGGAGCAAAGTCTTTGAAGAAC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCACCAGGGCCTCTTGTaGAATGTGAAATTTATCCAC +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNHQGLL*NVKFIH
Trigger: GTGGATAAATTTCACATTCCACAAGAGGCCCTGGTG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGAAGATTGAACAGTCCTaGAAGCTAAATTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRKIEQS*KLNSLT
Trigger: TGTTAGAGAATTTAGCTTCCAGGACTGTTCAATCTT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACACAATTCTTCCAATGTaGCCCAGGGAAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNTILPM*PREAKR
Trigger: TCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAATTGTCACACTTCACATaGTATTTTACTATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKLSHFT*YFTMSW
Trigger: CCAGGACATAGTAAAATATCATGTGAAGTGTGACAA...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGTCCATTTATTAGAATaGGACAGAGGAATGTGTTAC +
Preference number: 4 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYVHLLE*DRGMCY
Trigger: GTAACACATTCCTCTGTCTCATTCTAATAAATGGAC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAGTCCATTTATTAGAATaGGACAGAGGAATGTGTTAC +
Preference number: 4 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKVHLLE*DRGMCY
Trigger: GTAACACATTCCTCTGTCTCATTCTAATAAATGGAC...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTTGCCAAACTCCAAGTaGTGTCTTTCCAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNLPNSK*CLSKIE
Trigger: CTCTATCTTGGAAAGACACCACTTGGAGTTTGGCAA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGGTTGTAGTACTGTTTaGCAAAGCCAATATTCGAGT +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNGCSTV*QSQYSS
Trigger: ACTCGAATATTGGCTTTGCCAAACAGTACTACAACC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR TCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCATGTAGCAAAATCTTaGTATTGGAATCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNHVAKS*YWNLGD
Trigger: ATCACCCAGATTCCAATATCAAGATTTTGCTACATG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CCA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACTCCCATACACCTCTCTaGTTTTCAAGATTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSHTPL*FSRFSE
Trigger: TTCAGAAAATCTTGAAAACCAGAGAGGTGTATGGGA...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCCCTGCGGCTGCTGACTaGGCCGACTGCTGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAPAAAD*ADCCFC
Trigger: GCAGAAACAGCAGTCGGCCAAGTCAGCAGCCGCAGG...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGGGAATGGGATTCTGTaGCAGCACCGTGCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAGNGIL*QHRALQ
Trigger: CTGGAGCGCACGGTGCTGCAACAGAATCCCATTCCC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS CCA 90 bp GGAAAGGGTGGTGCCGTCCAGCCAGCACATCCCCAGTGGTGTTACTaGATGCAGCAGGACTTGGATGTAGTTGCACCCCCTGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GKGGAVQPAHPQWCY*MQQDLDVVAPPGLG
Trigger: CCCCAGCCCAGGGGGTGCAACTACATCCAAGTCCTGCTGCATCCAGTAACACCACTGGGGATGTGCTGGCTGGACGGCACCACCCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000512670.1
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCGGCATGGATCAGTCATaGGGTGTAGGCCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGGMDQS*GVGHPG
Trigger: CCCAGGGTGGCCTACACCCAATGACTGATCCATGCC...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS CCA 90 bp CTCCACCTCCTCTGCTGTCACCTCGCCCATGGCTGGGAATCCCACTaGCTACTCTGTAGAAGGACTGGGACGGAGGCCTTCCAATGGCAG +
Preference number: 5 (lower is better)
Translates to: LHLLCCHLAHGWESH*LLCRRTGTEAFQWQ
Trigger: CTGCCATTGGAAGGCCTCCGTCCCAGTCCTTCTACAGAGTAGCCAGTGGGATTCCCAGCCATGGGCGAGGTGACAGCAGAGGAGGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCAGCTCTGCGATGCCATaGCGGGTCCGGTACATGAAC +
Preference number: 5 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGSSAMP*RVRYMN
Trigger: GTTCATGTACCGGACCCGCAATGGCATCGCAGAGCT...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCTTCCACTCCTTGCGATaGTTGGTGATCCCGTCCAAC +
Preference number: 5 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAFHSLR*LVIPSN
Trigger: GTTGGACGGGATCACCAACAATCGCAAGGAGTGGAA...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGGCATGGATCAGTCATaGGGTGTAGGCCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPGMDQS*GVGHPG
Trigger: CCCAGGGTGGCCTACACCCAATGACTGATCCATGCC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGGCGCATTCATGATGTaGCAAATCAGGCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAGAFMM*QIRPFW
Trigger: CCAGAATGGCCTGATTTGCAACATCATGAATGCGCC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCATCTGGCAGCTCCGCTaGCAGGATCTCAGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLIWQLR*QDLSQL
Trigger: GAGCTGGCTGAGATCCTGCAAGCGGAGCTGCCAGAT...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS CCA 90 bp CTCTTCCCAGGAAAGGGTGGTGCCGTCCAGCCAGCACATCCCCAGTaGTGTTACTGGATGCAGCAGGACTTGGATGTAGTTGCACCCCCT +
Preference number: 5 (lower is better)
Translates to: LFPGKGGAVQPAHPQ*CYWMQQDLDVVAPP
Trigger: AGGGGGTGCAACTACATCCAAGTCCTGCTGCATCCAGTAACACCACTGGGGATGTGCTGGCTGGACGGCACCACCCTTTCCTGGGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000512670.1
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCCTTCCAATGGCAGTTTaGCAGTCTGCAACAAGTCCA +
Preference number: 5 (lower is better)
Translates to: FNPRPVGHMQPRTALNAALPMAV*QSATSP
Trigger: TGGACTTGTTGCAGACTGCAAAACTGCCATTGGAAG...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGCATCCTTGTGGACATaGAAAAGCCTGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPASLWT*KSLVAS
Trigger: GCTGGCCACCAGGCTTTTCAATGTCCACAAGGATGC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCAGTTCTTCAAAGACTTaGCTCCCAGACCACAGCAGT +
Preference number: 5 (lower is better)
Translates to: FNPRPVGHMQPRTALNAASSSKT*LPDHSS
Trigger: ACTGCTGTGGTCTGGGAGCAAAGTCTTTGAAGAACT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCAACATCGTCCTCTTCTaGAAATACAGGGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: FNPRPVGHMQPRTALNAANIVLF*KYRARS
Trigger: AGACCTCGCCCTGTATTTCAAGAAGAGGACGATGTT...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCTGCACCTCCCAGGGTTaGGTGATGGCTGAGAGATCA +
Preference number: 5 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPCTSQG*VMAERS
Trigger: TGATCTCTCAGCCATCACCAAACCCTGGGAGGTGCA...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCGTCAATGAAGCCGACTaGAAGCTTAGGGAGTTCATC +
Preference number: 5 (lower is better)
Translates to: FNPRPVGHMQPRTALNAAVNEAD*KLREFI
Trigger: GATGAACTCCCTAAGCTTCAAGTCGGCTTCATTGAC...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCGGTATTAGGCAGGCATaGGTTGCATGGGCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGGIRQA*VAWASD
Trigger: ATCACTGGCCCATGCAACCAATGCCTGCCTAATACC...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS GCA 90 bp GTGGTCTTCCACTGGCTTGAGTCATCTCTTCCCAGGAAAGGGTGGTaGCGTCCAGCCAGCACATCCCCAGTGGTGTTACTGGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: VVFHWLESSLPRKGW*RPASTSPVVLLDAA
Trigger: TGCTGCATCCAGTAACACCACTGGGGATGTGCTGGCTGGACGGCACCACCCTTTCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000512670.1
ENST00000613228.1
ENST00000617647.4
CDS GCA 90 bp GACAAAGCCCATGGGGCCCTTCACGTGTTTCTTCATGACAGGACCTaGTCCTCCCAGCCTTCTACTCTCTCTCGGCTCCTGCCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: DKAHGALHVFLHDRT*SSQPSTLSRLLPKP
Trigger: AGGCTTAGGCAGGAGCCGAGAGAGAGTAGAAGGCTGGGAGGAGCAGGTCCTGTCATGAAGAAACACGTGAAGGGCCCCATGGGCTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS-3UTR CAA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCTGGTCTTCCACTGGCTaGAGTCATCTCTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPWSSTG*SHLFPG
Trigger: TCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCA...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS CCA 90 bp TGTGTGGTCTTCCACTGGCTTGAGTCATCTCTTCCCAGGAAAGGGTaGTGCCGTCCAGCCAGCACATCCCCAGTGGTGTTACTGGATGCA +
Preference number: 5 (lower is better)
Translates to: CVVFHWLESSLPRKG*CRPASTSPVVLLDA
Trigger: TGCATCCAGTAACACCACTGGGGATGTGCTGGCTGGACGGCACCACCCTTTCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000512670.1
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCCTTCCAATGGCAGTTTaGCAGTCTGCAACAAGTCCA +
Preference number: 5 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGLPMAV*QSATSP
Trigger: TGGACTTGTTGCAGACTGCAAAACTGCCATTGGAAG...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCTCATCCTCCTCTGTGTaGGGGACGTTAGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPSSSSV*GTLAIF
Trigger: GAAGATTGCTAACGTCCCCAACACAGAGGAGGATGA...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR CAA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGAGTATCTGTCACAGTaGAGGAAAGCACGGACTGTG +
Preference number: 5 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPEYLSQ*RKARTV
Trigger: CACAGTCCGTGCTTTCCTCAACTGTGACAGATACTC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp TTCAACCCACGGCCCGTGGGCCACATGCAGCCCAGGACGGCTTTGAATGCGGCCTCGACGATTGAGGTTTaGAAAGATATTCAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: FNPRPVGHMQPRTALNAASTIEV*KDIQAL
Trigger: GAGAGCCTGAATATCTTTCAAAACCTCAATCGTCGA...GGCCGCATTCAAAGCCGTCCTGGGCTGCATGTGGCCCACGGGCCGTGGGTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCGCCATTTTGCTCAGGTaGGTCTCAGACTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSAILLR*VSDSWA
Trigger: AGCCCAGGAGTCTGAGACCAACCTGAGCAAAATGGC...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS CCA 90 bp GCACACACACCTAACATCAGGCTGACATCCCCTGTCTACTCACAATaGGATTCTGTTGCAGCACCGTGCGCTCCAGGTCACCTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: AHTPNIRLTSPVYSQ*DSVAAPCAPGHLVP
Trigger: GGGAACAAGGTGACCTGGAGCGCACGGTGCTGCAACAGAATCCCATTGTGAGTAGACAGGGGATGTCAGCCTGATGTTAGGTGTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS-3UTR CAA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCGAAGCCAAGATGTTCTaGGTCTTGTACTCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPEAKMF*VLYSVR
Trigger: CCTCACAGAGTACAAGACCAAGAACATCTTGGCTTC...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR CAA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCGGATTCGGGATGACTTaGATGTCCTCTTTGCCATGC +
Preference number: 5 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLGFGMT*MSSLPC
Trigger: GCATGGCAAAGAGGACATCAAAGTCATCCCGAATCC...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGGGAATGGGATTCTGTaGCAGCACCGTGCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGGNGIL*QHRALQ
Trigger: CTGGAGCGCACGGTGCTGCAACAGAATCCCATTCCC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACTCCTTGCGATTGTaGGTGATCCCGTCCAACATT +
Preference number: 5 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLHSLRL*VIPSNI
Trigger: AATGTTGGACGGGATCACCAACAATCGCAAGGAGTG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCTTCCACTCCTTGCGATaGTTGGTGATCCCGTCCAAC +
Preference number: 5 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSFHSLR*LVIPSN
Trigger: GTTGGACGGGATCACCAACAATCGCAAGGAGTGGAA...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS GCA 90 bp TTTGGCAAAGCCAATATTCGAGTCCAGGAACTTCTCCACCTCCTCTaGTGTCACCTCGCCCATGGCTGGGAATCCCACTGGCTACTCTGT +
Preference number: 5 (lower is better)
Translates to: FGKANIRVQELLHLL*CHLAHGWESHWLLC
Trigger: ACAGAGTAGCCAGTGGGATTCCCAGCCATGGGCGAGGTGACAGCAGAGGAGGTGGAGAAGTTCCTGGACTCGAATATTGGCTTTGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS CCA 90 bp GGGCTGCTCTTCCGATCTCCCCAACTGCGCATCTCCATGGGAAGCTaGCTGACTGTCTCAGCCAAGTTAACTTTCAATGTTGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: GLLFRSPQLRISMGS*LTVSAKLTFNVDRC
Trigger: GCACCTGTCAACATTGAAAGTTAACTTGGCTGAGACAGTCAGCCAGCTTCCCATGGAGATGCGCAGTTGGGGAGATCGGAAGAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS-3UTR CAA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCACTGTGTACAGGGCTTaGTGGAACTGTCGTTCGATG +
Preference number: 5 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSTVYRA*WNCRSM
Trigger: CATCGAACGACAGTTCCACAAAGCCCTGTACACAGT...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCCTTCCAATGGCAGTTTaGCAGTCTGCAACAAGTCCA +
Preference number: 5 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSLPMAV*QSATSP
Trigger: TGGACTTGTTGCAGACTGCAAAACTGCCATTGGAAG...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCTCGACGATTGAGGTTTaGAAAGATATTCAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPSTIEV*KDIQAL
Trigger: GAGAGCCTGAATATCTTTCAAAACCTCAATCGTCGA...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCTGCACCTCCCAGGGTTaGGTGATGGCTGAGAGATCA +
Preference number: 5 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGCTSQG*VMAERS
Trigger: TGATCTCTCAGCCATCACCAAACCCTGGGAGGTGCA...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCTGGATGCAGCAGGACTaGGATGTAGTTGCACCCCCT +
Preference number: 5 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGWMQQD*DVVAPP
Trigger: AGGGGGTGCAACTACATCCAAGTCCTGCTGCATCCA...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp ACTCAAAGCTGGTGGGGTCCCAAGTCCTTTGCTGAAGCTTGGGGTCTGTGCAGCGAGAATGAAGGAAGGTaGATTAAGGGCTGGCATCAC +
Preference number: 5 (lower is better)
Translates to: TQSWWGPKSFAEAWGLCSENEGR*IKGWHH
Trigger: GTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTC...GCTGCACAGACCCCAAGCTTCAGCAAAGGACTTGGGACCCCACCAGCTTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp CTGGAACAGCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCAGGCAAGCCAACCATaGAAAACGTTCATGAGAATG +
Preference number: 5 (lower is better)
Translates to: LEQPCTVIPCSAKMARPLQASQP*KTFMRM
Trigger: CATTCTCATGAACGTTTTCAATGGTTGGCTTGCCTG...GAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGCTGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS GCA 90 bp GTAGAAGGACTGGGACGGAGGCCTTCCAATGGCAGTTTTGCAGTCTaGAACAAGTCCAGTCTGGACTTCTCTGGGTCTTGTCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: VEGLGRRPSNGSFAV*NKSSLDFSGSCLQN
Trigger: GTTTTGCAGACAAGACCCAGAGAAGTCCAGACTGGACTTGTTGCAGACTGCAAAACTGCCATTGGAAGGCCTCCGTCCCAGTCCTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS GCA 90 bp CTACTCTGTAGAAGGACTGGGACGGAGGCCTTCCAATGGCAGTTTTaGAGTCTGCAACAAGTCCAGTCTGGACTTCTCTGGGTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: LLCRRTGTEAFQWQF*SLQQVQSGLLWVLS
Trigger: AGACAAGACCCAGAGAAGTCCAGACTGGACTTGTTGCAGACTGCAAAACTGCCATTGGAAGGCCTCCGTCCCAGTCCTTCTACAGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGATGGCCAGGCCTCTCCACCTGGCATGGATCAGTCATTGGGTGTAGGCCACCCAGCTTCTTCATGACATaGAAGATGCATTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: RWPGLSTWHGSVIGCRPPSFFMT*KMHFSV
Trigger: GACAGAGAAATGCATCTTCAATGTCATGAAGAAGCT...GGGTGGCCTACACCCAATGACTGATCCATGCCAGGTGGAGAGGCCTGGCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp GCCCTGCACAGTTATCCCATGCTCAGCCAAGATGGCCAGGCCTCTCCACCTGGCACAATTTCTTCCTTCTaGTTCACAATCGGCATTGAA +
Preference number: 5 (lower is better)
Translates to: ALHSYPMLSQDGQASPPGTISSF*FTIGIE
Trigger: TTCAATGCCGATTGTGAACAAGAAGGAAGAAATTGT...GCCAGGTGGAGAGGCCTGGCCATCTTGGCTGAGCATGGGATAACTGTGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS CCA 90 bp ATATTCAGGCTCTCGTCTCTGAGCAGTGTTTTGCCAAACTCCAAGTaGTGTCTTTCCAAGATAGAGGACCCATGGAGCTTGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: IFRLSSLSSVLPNSK*CLSKIEDPWSLASG
Trigger: CCCACTGGCCAAGCTCCATGGGTCCTCTATCTTGGAAAGACACCACTTGGAGTTTGGCAAAACACTGCTCAGAGACGAGAGCCTGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCTCGAGGACAGCATCCTaGTGGACATTGAAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGSRTAS*WTLKSL
Trigger: CAGGCTTTTCAATGTCCACAAGGATGCTGTCCTCGA...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGAGTATCTGTCACAGTaGAGGAAAGCACGGACTGTG +
Preference number: 5 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGEYLSQ*RKARTV
Trigger: CACAGTCCGTGCTTTCCTCAACTGTGACAGATACTC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCCTGCGGCTGCTGACTaGGCCGACTGCTGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: KPTIENVHENEGRLIKGWPAAAD*ADCCFC
Trigger: GCAGAAACAGCAGTCGGCCAAGTCAGCAGCCGCAGG...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGATGGATGCAGCAGGACTaGGATGTAGTTGCACCCCCT +
Preference number: 5 (lower is better)
Translates to: KTILPMWPREAKRLNSPGWMQQD*DVVAPP
Trigger: AGGGGGTGCAACTACATCCAAGTCCTGCTGCATCCA...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGCCATTTTGCTCAGGTaGGTCTCAGACTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: KTILPMWPREAKRLNSPGAILLR*VSDSWA
Trigger: AGCCCAGGAGTCTGAGACCAACCTGAGCAAAATGGC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS GCA 90 bp CATCGTCCTCTTCTTGAAATACAGGGCGAGGTCTGTGGCAATGATTaGAATGTCCATCATGTGGATGGCATGCTCATGCTGTCGACGATT +
Preference number: 5 (lower is better)
Translates to: HRPLLEIQGEVCGND*NVHHVDGMLMLSTI
Trigger: AATCGTCGACAGCATGAGCATGCCATCCACATGATGGACATTGCAATCATTGCCACAGACCTCGCCCTGTATTTCAAGAAGAGGACGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS GCA 90 bp TCACAGGCGGTCATCATCATGGCCATAACGATTTCCTTCCGTGTCTaGTCCAGCATCATGTACTGTGTCCACTCCTGTTCACTCTCATAT +
Preference number: 5 (lower is better)
Translates to: SQAVIIMAITISFRV*SSIMYCVHSCSLSY
Trigger: ATATGAGAGTGAACAGGAGTGGACACAGTACATGATGCTGGAGCAGACACGGAAGGAAATCGTTATGGCCATGATGATGACCGCCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS GCA 90 bp AGCTGGCTGACTGTCTCAGCCAAGTTAACTTTCAATGTTGACAGGTaGACAACTTGCTCACTCTGTGCTGTTAGATTAGGGTCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SWLTVSAKLTFNVDR*TTCSLCAVRLGSGE
Trigger: CTCCCCTGACCCTAATCTAACAGCACAGAGTGAGCAAGTTGTGCACCTGTCAACATTGAAAGTTAACTTGGCTGAGACAGTCAGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS-3UTR CAA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGAGCTCTGCGATGCCATaGCGGGTCCGGTACATGAAC +
Preference number: 5 (lower is better)
Translates to: KPTIENVHENEGRLIKGWSSAMP*RVRYMN
Trigger: GTTCATGTACCGGACCCGCAATGGCATCGCAGAGCT...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGAGCTCTGCGATGCCATaGCGGGTCCGGTACATGAAC +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRSSAMP*RVRYMN
Trigger: GTTCATGTACCGGACCCGCAATGGCATCGCAGAGCT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGGCGCTCCAGGTCACCTaGTTCCCAGAATTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRALQVT*FPEFSS
Trigger: GCTGCTGAATTCTGGGAACAAGGTGACCTGGAGCGC...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGAGCGCCTTCCACTCCTaGCGATTGTTGGTGATCCCG +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRSAFHS*RLLVIP
Trigger: CGGGATCACCAACAATCGCAAGGAGTGGAAGGCGCT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACCCTGCGGCTGCTGACTaGGCCGACTGCTGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYPAAAD*ADCCFC
Trigger: GCAGAAACAGCAGTCGGCCAAGTCAGCAGCCGCAGG...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS GCA 90 bp ACTGTCTCAGCCAAGTTAACTTTCAATGTTGACAGGTGCACAACTTaGTCACTCTGTGCTGTTAGATTAGGGTCAGGGGAGGTGGATGGA +
Preference number: 5 (lower is better)
Translates to: TVSAKLTFNVDRCTT*SLCAVRLGSGEVDG
Trigger: TCCATCCACCTCCCCTGACCCTAATCTAACAGCACAGAGTGAGCAAGTTGTGCACCTGTCAACATTGAAAGTTAACTTGGCTGAGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS-3UTR CAA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGATCGAGGACAGCATCCTaGTGGACATTGAAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: KTILPMWPREAKRLNSPGSRTAS*WTLKSL
Trigger: CAGGCTTTTCAATGTCCACAAGGATGCTGTCCTCGA...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCAAAAATTCCTTCTGCTaGGTCATGTCTAAGAGACCC +
Preference number: 5 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGKNSFC*VMSKRP
Trigger: GGGTCTCTTAGACATGACCAAGCAGAAGGAATTTTT...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAATCTGGCAGCTCCGCTaGCAGGATCTCAGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKIWQLR*QDLSQL
Trigger: GAGCTGGCTGAGATCCTGCAAGCGGAGCTGCCAGAT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGACCGCACCAGGGCCTCTaGTGGAATGTGAAATTTATC +
Preference number: 5 (lower is better)
Translates to: KTILPMWPREAKRLNSPGPHQGL*WNVKFI
Trigger: GATAAATTTCACATTCCACAAGAGGCCCTGGTGCGG...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGTGCACCTCCCAGGGTTaGGTGATGGCTGAGAGATCA +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRCTSQG*VMAERS
Trigger: TGATCTCTCAGCCATCACCAAACCCTGGGAGGTGCA...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGTGGATGCAGCAGGACTaGGATGTAGTTGCACCCCCT +
Preference number: 5 (lower is better)
Translates to: KPTIENVHENEGRLIKGWWMQQD*DVVAPP
Trigger: AGGGGGTGCAACTACATCCAAGTCCTGCTGCATCCA...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGGCCATTTTGCTCAGGTaGGTCTCAGACTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRAILLR*VSDSWA
Trigger: AGCCCAGGAGTCTGAGACCAACCTGAGCAAAATGGC...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTGGTATTAGGCAGGCATaGGTTGCATGGGCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGGIRQA*VAWASD
Trigger: ATCACTGGCCCATGCAACCAATGCCTGCCTAATACC...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGCTTGAAGTCAGGAGTTaGAGGCCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRLEVRS*RPAWAT
Trigger: TGTTGCCCAGGCTGGCCTCAAACTCCTGACTTCAAG...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCTTGAAGTCAGGAGTTaGAGGCCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: KPTIENVHENEGRLIKGWLEVRS*RPAWAT
Trigger: TGTTGCCCAGGCTGGCCTCAAACTCCTGACTTCAAG...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTCCGCACCAGGGCCTCTaGTGGAATGTGAAATTTATC +
Preference number: 5 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGPHQGL*WNVKFI
Trigger: GATAAATTTCACATTCCACAAGAGGCCCTGGTGCGG...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACGCGCTCCAGGTCACCTaGTTCCCAGAATTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYALQVT*FPEFSS
Trigger: GCTGCTGAATTCTGGGAACAAGGTGACCTGGAGCGC...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAGTCAATGAAGCCGACTaGAAGCTTAGGGAGTTCATC +
Preference number: 5 (lower is better)
Translates to: KTILPMWPREAKRLNSPGVNEAD*KLREFI
Trigger: GATGAACTCCCTAAGCTTCAAGTCGGCTTCATTGAC...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGCATCACAAGTTGGGTCAGGGTTTTGCCATTTaGCTCAGGTTGGTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: NVHENEGRLIKGWHHKLGQGFAI*LRLVSD
Trigger: GTCTGAGACCAACCTGAGCAAAATGGCAAAACCCTG...ACCCAACTTGTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS TCA 90 bp CATTCATTATGGGGGAAGCCAAGATGTTCTTGGTCTTGTACTCTGTaGGGATGTCCACAAAGTCACAGAAATGCTCATCCTCCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: HSLWGKPRCSWSCTL*GCPQSHRNAHPPLC
Trigger: ACACAGAGGAGGATGAGCATTTCTGTGACTTTGTGGACATCCTCACAGAGTACAAGACCAAGAACATCTTGGCTTCCCCCATAATGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000508173.5
CDS-3UTR CAA 90 bp AAGCTTGGGGTCTGTGCAGCCCATCAAAGCATAGATCACAGCTGGGTATTAGGCGCAAAATTGAGGTACTaGAGAAGAATCTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: KLGVCAAHQSIDHSWVLGAKLRY*RRISSS
Trigger: AGATGAAGAGATTCTTCTCAAGTACCTCAATTTTGC...GCCTAATACCCAGCTGTGATCTATGCTTTGATGGGCTGCACAGACCCCAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGGGATTCGGGATGACTTaGATGTCCTCTTTGCCATGC +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRGFGMT*MSSLPC
Trigger: GCATGGCAAAGAGGACATCAAAGTCATCCCGAATCC...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACATCTGGCAGCTCCGCTaGCAGGATCTCAGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNIWQLR*QDLSQL
Trigger: GAGCTGGCTGAGATCCTGCAAGCGGAGCTGCCAGAT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGATCTCTTCATCTCTCTaGGTGAAGTGGGATCCATCC +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRISSSL*VKWDPS
Trigger: GGATGGATCCCACTTCACCAAGAGAGATGAAGAGAT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR CAA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGAAAAAATTCCTTCTGCTaGGTCATGTCTAAGAGACCC +
Preference number: 5 (lower is better)
Translates to: KTILPMWPREAKRLNSPGKNSFC*VMSKRP
Trigger: GGGTCTCTTAGACATGACCAAGCAGAAGGAATTTTT...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACTTCCACTCCTTGCGATaGTTGGTGATCCCGTCCAAC +
Preference number: 5 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYFHSLR*LVIPSN
Trigger: GTTGGACGGGATCACCAACAATCGCAAGGAGTGGAA...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACAGCGCCTTCCACTCCTaGCGATTGTTGGTGATCCCG +
Preference number: 5 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSAFHS*RLLVIP
Trigger: CGGGATCACCAACAATCGCAAGGAGTGGAAGGCGCT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACTGGTCTTCCACTGGCTaGAGTCATCTCTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYWSSTG*SHLFPG
Trigger: TCCTGGGAAGAGATGACTCAAGCCAGTGGAAGACCA...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGGAGAATGAAGGAAGGTaGATTAAGGGCTGGCATCAC +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRENEGR*IKGWHH
Trigger: GTGATGCCAGCCCTTAATCAACCTTCCTTCATTCTC...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGAGTATCTCCTCTGTGTaGGGGACGTTAGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRSISSV*GTLAIF
Trigger: GAAGATTGCTAACGTCCCCAACACAGAGGAGATACT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613228.1
ENST00000617647.4
CDS TCA 90 bp ACCGCACCAGGGCCTCTTGTGGAATGTGAAATTTATCCACCACTTTaGGCTCATAATACATCTGTATTCCACATTTTACCAGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: TAPGPLVECEIYPPL*AHNTSVFHILPAPV
Trigger: AACTGGAGCTGGTAAAATGTGGAATACAGATGTATTATGAGCTCAAAGTGGTGGATAAATTTCACATTCCACAAGAGGCCCTGGTGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGCATCCTTGTGGACATaGAAAAGCCTGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNASLWT*KSLVAS
Trigger: GCTGGCCACCAGGCTTTTCAATGTCCACAAGGATGC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACTCGAGGACAGCATCCTaGTGGACATTGAAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYSRTAS*WTLKSL
Trigger: CAGGCTTTTCAATGTCCACAAGGATGCTGTCCTCGA...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGAAGATGTTCTTGGTCTaGTACTCTGTGAGGATGTCC +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRKMFLV*YSVRMS
Trigger: GGACATCCTCACAGAGTACAAGACCAAGAACATCTT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255266.10
CDS-3UTR CAA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAACTGTGTACAGGGCTTaGTGGAACTGTCGTTCGATG +
Preference number: 5 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKTVYRA*WNCRSM
Trigger: CATCGAACGACAGTTCCACAAAGCCCTGTACACAGT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACACTGTGTACAGGGCTTaGTGGAACTGTCGTTCGATG +
Preference number: 5 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYTVYRA*WNCRSM
Trigger: CATCGAACGACAGTTCCACAAAGCCCTGTACACAGT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAGAGTATCTGTCACAGTaGAGGAAAGCACGGACTGTG +
Preference number: 5 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKEYLSQ*RKARTV
Trigger: CACAGTCCGTGCTTTCCTCAACTGTGACAGATACTC...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACACTCCTTGCGATTGTaGGTGATCCCGTCCAACATT +
Preference number: 5 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKHSLRL*VIPSNI
Trigger: AATGTTGGACGGGATCACCAACAATCGCAAGGAGTG...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS TCA 90 bp TTCTTCATGACATTGAAGATGCATTTCTCTGTCTGTAAATTCTCCTaGAAGTCCCGCAGGAGATCAAAGATGATTTCGCTCTCCTCCATG +
Preference number: 5 (lower is better)
Translates to: FFMTLKMHFSVCKFS*KSRRRSKMISLSSM
Trigger: CATGGAGGAGAGCGAAATCATCTTTGATCTCCTGCGGGACTTTCAGGAGAATTTACAGACAGAGAAATGCATCTTCAATGTCATGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCCACGGAAAAATTCCTTCTGCTaGGTCATGTCTAAGAGACCC +
Preference number: 5 (lower is better)
Translates to: RMFKSHWIRYKPSLFNPRKNSFC*VMSKRP
Trigger: GGGTCTCTTAGACATGACCAAGCAGAAGGAATTTTT...CCGTGGGTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAAACATCGTCCTCTTCTaGAAATACAGGGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKNIVLF*KYRARS
Trigger: AGACCTCGCCCTGTATTTCAAGAAGAGGACGATGTT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AAGACAATTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGAACAGTCCTGGATGTAATCCCAACACTTaGGGATTTGCCTTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: KTILPMWPREAKRLNSPGCNPNT*GFAFSF
Trigger: AAAAGAAAAGGCAAATCCCAAAGTGTTGGGATTACA...TCCAGGACTGTTCAATCTTTTGGCTTCCCTGGGCCACATTGGAAGAATTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617647.4
CDS-3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGGATTCGGGATGACTTaGATGTCCTCTTTGCCATGC +
Preference number: 5 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNGFGMT*MSSLPC
Trigger: GCATGGCAAAGAGGACATCAAAGTCATCCCGAATCC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACGGCGCATTCATGATGTaGCAAATCAGGCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNGAFMM*QIRPFW
Trigger: CCAGAATGGCCTGATTTGCAACATCATGAATGCGCC...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCACTCCTTGCGATTGTaGGTGATCCCGTCCAACATT +
Preference number: 5 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNHSLRL*VIPSNI
Trigger: AATGTTGGACGGGATCACCAACAATCGCAAGGAGTG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACCAGGGTTTTGCCATTTaGCTCAGGTTGGTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNQGFAI*LRLVSD
Trigger: GTCTGAGACCAACCTGAGCAAAATGGCAAAACCCTG...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp AAGCCAACCATTGAAAACGTTCATGAGAATGAAGGAAGGTTGATTAAGGGCTGGACAATTTCTTCCTTCTaGTTCACAATCGGCATTGAA +
Preference number: 5 (lower is better)
Translates to: KPTIENVHENEGRLIKGWTISSF*FTIGIE
Trigger: TTCAATGCCGATTGTGAACAAGAAGGAAGAAATTGT...CCAGCCCTTAATCAACCTTCCTTCATTCTCATGAACGTTTTCAATGGTTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000613228.1
CDS-3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACAACATCGTCCTCTTCTaGAAATACAGGGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNNIVLF*KYRARS
Trigger: AGACCTCGCCCTGTATTTCAAGAAGAGGACGATGTT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ACTAAAAGAATGTTTAAAAGCCACTGGATAAGGTATAAGCCAAGCTTGTTCAACAGTATCTCCTCTGTGTaGGGGACGTTAGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: TKRMFKSHWIRYKPSLFNSISSV*GTLAIF
Trigger: GAAGATTGCTAACGTCCCCAACACAGAGGAGATACT...GTTGAACAAGCTTGGCTTATACCTTATCCAGTGGCTTTTAAACATTCTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp TGTCCATTTATTAGAATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAAAGCTTCTTCATGACATaGAAGATGCATTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: CPFIRMRQRNVLHAATKKSFFMT*KMHFSV
Trigger: GACAGAGAAATGCATCTTCAATGTCATGAAGAAGCT...TTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCATTCTAATAAATGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS-3UTR CAA 90 bp ATGAGACAGAGGAATGTGTTACATGCGGCCACAAAGAAACAAACAGATAAATACACAATTTCTTCCTTCTaGTTCACAATCGGCATTGAA +
Preference number: 5 (lower is better)
Translates to: MRQRNVLHAATKKQTDKYTISSF*FTIGIE
Trigger: TTCAATGCCGATTGTGAACAAGAAGGAAGAAATTGT...GTATTTATCTGTTTGTTTCTTTGTGGCCGCATGTAACACATTCCTCTGTCTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255266.10
ENST00000613228.1
ENST00000617647.4
CDS TCA 72 bp CCACGGCAGCCTCCTTGGCCCCAAGGAGGTCGGAGATaGGCTTGGCCCGGTAGTGGAGGTTGTAGTACTGTT +
Preference number: 6 (lower is better)
Translates to: PRQPPWPQGGRR*AWPGSGGCSTV
Trigger: AACAGTACTACAACCTCCACTACCGGGCCAAGCTCATCTCCGACCTCCTTGGGGCCAAGGAGGCTGCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS CCA 72 bp CTCTGCTGTCACCTCGCCCATGGCTGGGAATCCCACTaGCTACTCTGTAGAAGGACTGGGACGGAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: LCCHLAHGWESH*LLCRRTGTEAF
Trigger: GAAGGCCTCCGTCCCAGTCCTTCTACAGAGTAGCCAGTGGGATTCCCAGCCATGGGCGAGGTGACAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS CCA 72 bp GGTGCCGTCCAGCCAGCACATCCCCAGTGGTGTTACTaGATGCAGCAGGACTTGGATGTAGTTGCACCCCCT +
Preference number: 6 (lower is better)
Translates to: GAVQPAHPQWCY*MQQDLDVVAPP
Trigger: AGGGGGTGCAACTACATCCAAGTCCTGCTGCATCCAGTAACACCACTGGGGATGTGCTGGCTGGACGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000512670.1
ENST00000613228.1
ENST00000617647.4
CDS GCA 72 bp CACTGGCTTGAGTCATCTCTTCCCAGGAAAGGGTGGTaGCGTCCAGCCAGCACATCCCCAGTGGTGTTACTG +
Preference number: 6 (lower is better)
Translates to: HWLESSLPRKGW*RPASTSPVVLL
Trigger: CAGTAACACCACTGGGGATGTGCTGGCTGGACGGCACCACCCTTTCCTGGGAAGAGATGACTCAAGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000512670.1
ENST00000613228.1
ENST00000617647.4
CDS GCA 72 bp CAGGAGCACTTTGCACTTGTTATACATCGGGGCTCGTaGTGCCCCGGTTCAGCTCACCAGGATCTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: QEHFALVIHRGS*CPGSAHQDLSQ
Trigger: CTGGCTGAGATCCTGGTGAGCTGAACCGGGGCAGCACGAGCCCCGATGTATAACAAGTGCAAAGTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508173.5
CDS GCA 72 bp CATGGGGCCCTTCACGTGTTTCTTCATGACAGGACCTaGTCCTCCCAGCCTTCTACTCTCTCTCGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: HGALHVFLHDRT*SSQPSTLSRLL
Trigger: CAGGAGCCGAGAGAGAGTAGAAGGCTGGGAGGAGCAGGTCCTGTCATGAAGAAACACGTGAAGGGCCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS TCA 72 bp CGACAAAGCCCATGGGGCCCTTCACGTGTTTCTTCATaGCAGGACCTGCTCCTCCCAGCCTTCTACTCTCTC +
Preference number: 6 (lower is better)
Translates to: RQSPWGPSRVSS*QDLLLPAFYSL
Trigger: GAGAGAGTAGAAGGCTGGGAGGAGCAGGTCCTGTCATGAAGAAACACGTGAAGGGCCCCATGGGCTTTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS GCA 72 bp AGCTTTGCCTTCAGGGACTTCAGGGAAACTTCGGGCTaGTCTTCCGATCTCCCCAACTGCGCATCTCCATGG +
Preference number: 6 (lower is better)
Translates to: SFAFRDFRETSG*SSDLPNCASPW
Trigger: CCATGGAGATGCGCAGTTGGGGAGATCGGAAGAGCAGCCCGAAGTTTCCCTGAAGTCCCTGAAGGCAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS CCA 72 bp GGAAAGGGTGGTGCCGTCCAGCCAGCACATCCCCAGTaGTGTTACTGGATGCAGCAGGACTTGGATGTAGTT +
Preference number: 6 (lower is better)
Translates to: GKGGAVQPAHPQ*CYWMQQDLDVV
Trigger: AACTACATCCAAGTCCTGCTGCATCCAGTAACACCACTGGGGATGTGCTGGCTGGACGGCACCACCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000512670.1
ENST00000613228.1
ENST00000617647.4
CDS GCA 72 bp TTTCCTGCGGCTGCTGACTTGGCCGACTGCTGTTTCTaGTTCTTCTCCTCCTGCACCTTCATCTTGGCATCG +
Preference number: 6 (lower is better)
Translates to: FPAAADLADCCF*FFSSCTFILAS
Trigger: CGATGCCAAGATGAAGGTGCAGGAGGAGAAGAAGCAGAAACAGCAGTCGGCCAAGTCAGCAGCCGCAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000512670.1
ENST00000613228.1
ENST00000617647.4
CDS CCA 72 bp CCTAACATCAGGCTGACATCCCCTGTCTACTCACAATaGGATTCTGTTGCAGCACCGTGCGCTCCAGGTCAC +
Preference number: 6 (lower is better)
Translates to: PNIRLTSPVYSQ*DSVAAPCAPGH
Trigger: GTGACCTGGAGCGCACGGTGCTGCAACAGAATCCCATTGTGAGTAGACAGGGGATGTCAGCCTGATGTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS GCA 72 bp AGAAGGACTGGGACGGAGGCCTTCCAATGGCAGTTTTaGAGTCTGCAACAAGTCCAGTCTGGACTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: RRTGTEAFQWQF*SLQQVQSGLLW
Trigger: CCAGAGAAGTCCAGACTGGACTTGTTGCAGACTGCAAAACTGCCATTGGAAGGCCTCCGTCCCAGTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS GCA 72 bp GCTTTGTTTCTGTCCATCATGGGAATGGGATTCTGTTaGAGCACCGTGCGCTCCAGGTCACCTTGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: ALFLSIMGMGFC*STVRSRSPCSQ
Trigger: CTGGGAACAAGGTGACCTGGAGCGCACGGTGCTGCAACAGAATCCCATTCCCATGATGGACAGAAACAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS CAA 72 bp GCATTCATTGCAGGGGCCCACCCCCAGAGCTTCTGGTaGGGTAGACCTAGGGTGAGGCTTGTGAATATACAT +
Preference number: 6 (lower is better)
Translates to: AFIAGAHPQSFW*GRPRVRLVNIH
Trigger: ATGTATATTCACAAGCCTCACCCTAGGTCTACCCAACCAGAAGCTCTGGGGGTGGGCCCCTGCAATGAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS GCA 72 bp CTCTGTGTTGGGGACGTTAGCAATCTTCTTAGAGTGTaGGACATGGCCCACGATGCCCATGTCCAAAGGGAA +
Preference number: 6 (lower is better)
Translates to: LCVGDVSNLLRV*DMAHDAHVQRE
Trigger: TTCCCTTTGGACATGGGCATCGTGGGCCATGTCGCACACTCTAAGAAGATTGCTAACGTCCCCAACACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS CAA 90 bp CTGGGTCTGCTGGAAGGATCAGAACAGAGTGATGGGGAACATGCTTaGCAAGGAGAAACCCCTGCATGCTCAGGAGCACTTTGCACTTGT +
Preference number: 6 (lower is better)
Translates to: LGLLEGSEQSDGEHA*QGETPACSGALCTC
Trigger: ACAAGTGCAAAGTGCTCCTGAGCATGCAGGGGTTTCTCCTTGCAAAGCATGTTCCCCATCACTCTGTTCTGATCCTTCCAGCAGACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508173.5
CDS CAA 90 bp CTCTCTTTTACCCATCCTTTCCAAACCCTGCTTTACTTCCCAGCTTaGCCTTCAGGGACTTCAGGGAAACTTCGGGCTGCTCTTCCGATC +
Preference number: 6 (lower is better)
Translates to: LSFTHPFQTLLYFPA*PSGTSGKLRAALPI
Trigger: GATCGGAAGAGCAGCCCGAAGTTTCCCTGAAGTCCCTGAAGGCAAAGCTGGGAAGTAAAGCAGGGTTTGGAAAGGATGGGTAAAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS TCA 72 bp GTAAATTCTCCTGAAAGTCCCGCAGGAGATCAAAGATaGTTTCGCTCTCCTCCATGCTGCTCGGGGAGTGGT +
Preference number: 6 (lower is better)
Translates to: VNSPESPAGDQR*FRSPPCCSGSG
Trigger: ACCACTCCCCGAGCAGCATGGAGGAGAGCGAAATCATCTTTGATCTCCTGCGGGACTTTCAGGAGAATTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS TCA 72 bp GGCAGCTCCGCTTGCTGTATAAGGAATAGAGTCAGGTaGTTAGGAAACATGAAGTGTTTCTGGGTGCCCACC +
Preference number: 6 (lower is better)
Translates to: GSSACCIRNRVR*LGNMKCFWVPT
Trigger: GGTGGGCACCCAGAAACACTTCATGTTTCCTAATCACCTGACTCTATTCCTTATACAGCAAGCGGAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508173.5
CDS CCA 72 bp CTCTCGTCTCTGAGCAGTGTTTTGCCAAACTCCAAGTaGTGTCTTTCCAAGATAGAGGACCCATGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: LSSLSSVLPNSK*CLSKIEDPWSL
Trigger: CAAGCTCCATGGGTCCTCTATCTTGGAAAGACACCACTTGGAGTTTGGCAAAACACTGCTCAGAGACGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS CCA 72 bp TTCCGATCTCCCCAACTGCGCATCTCCATGGGAAGCTaGCTGACTGTCTCAGCCAAGTTAACTTTCAATGTT +
Preference number: 6 (lower is better)
Translates to: FRSPQLRISMGS*LTVSAKLTFNV
Trigger: AACATTGAAAGTTAACTTGGCTGAGACAGTCAGCCAGCTTCCCATGGAGATGCGCAGTTGGGGAGATCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS CAA 72 bp GTCATGTCTAAGAGACCCACAGAGTATCTGTCACAGTaGAGGAAAGCACGGACTGTGTACAGGGCTTTGTGG +
Preference number: 6 (lower is better)
Translates to: VMSKRPTEYLSQ*RKARTVYRALW
Trigger: CCACAAAGCCCTGTACACAGTCCGTGCTTTCCTCAACTGTGACAGATACTCTGTGGGTCTCTTAGACATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS TCA 72 bp TCATGTCTAAGAGACCCACAGAGTATCTGTCACAGTTaGGGAAAGCACGGACTGTGTACAGGGCTTTGTGGA +
Preference number: 6 (lower is better)
Translates to: SCLRDPQSICHS*GKHGLCTGLCG
Trigger: TCCACAAAGCCCTGTACACAGTCCGTGCTTTCCTCAACTGTGACAGATACTCTGTGGGTCTCTTAGACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS GCA 72 bp GTCATCATCATGGCCATAACGATTTCCTTCCGTGTCTaGTCCAGCATCATGTACTGTGTCCACTCCTGTTCA +
Preference number: 6 (lower is better)
Translates to: VIIMAITISFRV*SSIMYCVHSCS
Trigger: TGAACAGGAGTGGACACAGTACATGATGCTGGAGCAGACACGGAAGGAAATCGTTATGGCCATGATGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS CAA 72 bp GTGGATGGCATGCTCATGCTGTCGACGATTGAGGTTTaGAAAGATATTCAGGCTCTCGTCTCTGAGCAGTGT +
Preference number: 6 (lower is better)
Translates to: VDGMLMLSTIEV*KDIQALVSEQC
Trigger: ACACTGCTCAGAGACGAGAGCCTGAATATCTTTCAAAACCTCAATCGTCGACAGCATGAGCATGCCATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS CAA 72 bp GTCAGGGGAGGTGGATGGACTTCTAGACCTTTGAAATaGAAAGGGCAATCTAAGTGTTGGAGTCCACTTGCC +
Preference number: 6 (lower is better)
Translates to: VRGGGWTSRPLK*KGQSKCWSPLA
Trigger: GGCAAGTGGACTCCAACACTTAGATTGCCCTTTCAATTTCAAAGGTCTAGAAGTCCATCCACCTCCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS TCA 72 bp TGGATGGCATGCTCATGCTGTCGACGATTGAGGTTTTaGAAGATATTCAGGCTCTCGTCTCTGAGCAGTGTT +
Preference number: 6 (lower is better)
Translates to: WMACSCCRRLRF*KIFRLSSLSSV
Trigger: AACACTGCTCAGAGACGAGAGCCTGAATATCTTTCAAAACCTCAATCGTCGACAGCATGAGCATGCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS GCA 72 bp GCCAAGTTAACTTTCAATGTTGACAGGTGCACAACTTaGTCACTCTGTGCTGTTAGATTAGGGTCAGGGGAG +
Preference number: 6 (lower is better)
Translates to: AKLTFNVDRCTT*SLCAVRLGSGE
Trigger: CTCCCCTGACCCTAATCTAACAGCACAGAGTGAGCAAGTTGTGCACCTGTCAACATTGAAAGTTAACTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS CAA 72 bp TCCTTCCCATTCATTATGGGGGAAGCCAAGATGTTCTaGGTCTTGTACTCTGTGAGGATGTCCACAAAGTCA +
Preference number: 6 (lower is better)
Translates to: SFPFIMGEAKMF*VLYSVRMSTKS
Trigger: TGACTTTGTGGACATCCTCACAGAGTACAAGACCAAGAACATCTTGGCTTCCCCCATAATGAATGGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000508173.5
CDS GCA 72 bp ACTGTCTCAGCCAAGTTAACTTTCAATGTTGACAGGTaGACAACTTGCTCACTCTGTGCTGTTAGATTAGGG +
Preference number: 6 (lower is better)
Translates to: TVSAKLTFNVDR*TTCSLCAVRLG
Trigger: CCCTAATCTAACAGCACAGAGTGAGCAAGTTGTGCACCTGTCAACATTGAAAGTTAACTTGGCTGAGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS CAA 72 bp CCATTCATTATGGGGGAAGCCAAGATGTTCTTGGTCTaGTACTCTGTGAGGATGTCCACAAAGTCACAGAAA +
Preference number: 6 (lower is better)
Translates to: PFIMGEAKMFLV*YSVRMSTKSQK
Trigger: TTTCTGTGACTTTGTGGACATCCTCACAGAGTACAAGACCAAGAACATCTTGGCTTCCCCCATAATGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000508173.5
CDS TCA 72 bp AAGAATGGCAGACTGCTGCTAATTGTTGGCTGTAGCTaGTGGGCACTAGAGTTCACTGACTATTCTCAATAT +
Preference number: 6 (lower is better)
Translates to: KNGRLLLIVGCS*WALEFTDYSQY
Trigger: ATATTGAGAATAGTCAGTGAACTCTAGTGCCCATCAGCTACAGCCAACAATTAGCAGCAGTCTGCCATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512670.1
CDS TCA 72 bp ACATTGAAGATGCATTTCTCTGTCTGTAAATTCTCCTaGAAGTCCCGCAGGAGATCAAAGATGATTTCGCTC +
Preference number: 6 (lower is better)
Translates to: TLKMHFSVCKFS*KSRRRSKMISL
Trigger: GAGCGAAATCATCTTTGATCTCCTGCGGGACTTTCAGGAGAATTTACAGACAGAGAAATGCATCTTCAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4
CDS CCA 72 bp TACTTGAGAAGAATCTCTTCATCTCTCTTGGTGAAGTaGGATCCATCCACTTTATTCACAGCCATGATTATG +
Preference number: 6 (lower is better)
Translates to: YLRRISSSLLVK*DPSTLFTAMIM
Trigger: CATAATCATGGCTGTGAATAAAGTGGATGGATCCCACTTCACCAAGAGAGATGAAGAGATTCTTCTCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255266.10
ENST00000508173.5
CDS TCA 72 bp GGGCCTCTTGTGGAATGTGAAATTTATCCACCACTTTaGGCTCATAATACATCTGTATTCCACATTTTACCA +
Preference number: 6 (lower is better)
Translates to: GPLVECEIYPPL*AHNTSVFHILP
Trigger: TGGTAAAATGTGGAATACAGATGTATTATGAGCTCAAAGTGGTGGATAAATTTCACATTCCACAAGAGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255266.10
ENST00000508173.5
ENST00000613228.1
ENST00000617647.4