RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE5A (Homo sapiens)

Ensembl gene IDs: ENSG00000138735

Ensembl transcript IDs: ENST00000264805.9, ENST00000354960.8, ENST00000394439.5, ENST00000420633.1, ENST00000502912.1, ENST00000503412.1, ENST00000508914.1, ENST00000509612.1, ENST00000512450.5, ENST00000512494.1, ENST00000512739.5, ENST00000513594.5

Found 394 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTTCACCTGCTTTGCATCAGGTAGGTGAGATGAAAGTGATTTTATaGGTAGCTTTCAGAAAAATGTACTGCACTGAAGTGACAAAGTTC +
Preference number: 1 (lower is better)
Translates to: VSPALHQVGEMKVIL*VAFRKMYCTEVTKF
Trigger: GAACTTTGTCACTTCAGTGCAGTACATTTTTCTGAAAGCTACCCATAAAATCACTTTCATCTCACCTACCTGATGCAAAGCAGGTGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR TCA 90 bp GGGCCAGTGTTTAGCATTCACATCCAGGATTCTCTGGATCTCAGTTaGCTTGTCCTATACATCAAAATATGGCAATTTTTCAATCACAAT +
Preference number: 1 (lower is better)
Translates to: GPVFSIHIQDSLDLS*LVLYIKIWQFFNHN
Trigger: ATTGTGATTGAAAAATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGGATGTGAATGCTAAACACTGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR GCA 90 bp GGTGAGATGAAAGTGATTTTATGGGTAGCTTTCAGAAAAATGTACTaGACTGAAGTGACAAAGTTCTGTCTTGCCTGTTCTCTCACAAAA +
Preference number: 1 (lower is better)
Translates to: GEMKVILWVAFRKMY*TEVTKFCLACSLTK
Trigger: TTTTGTGAGAGAACAGGCAAGACAGAACTTTGTCACTTCAGTGCAGTACATTTTTCTGAAAGCTACCCATAAAATCACTTTCATCTCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCTCCTTCAGGGACCGTaGGCTCCTTGGGGTCACTGC +
Preference number: 2 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEALLQGP*APWGHC
Trigger: GCAGTGACCCCAAGGAGCTCACGGTCCCTGAAGGAG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCACCTCAATCAAGTCAGTaGCTGGATCATCTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPPQSSQ*LDHLLR
Trigger: CCTTAGGAGATGATCCAGTCACTGACTTGATTGAGG...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATGTACTGCACTGAAGTaGCAAAGTTCTGTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPCTALK*QSSVLP
Trigger: AGGCAAGACAGAACTTTGTCACTTCAGTGCAGTACA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATACATCCAGGATTCTCTaGATCTCAGTTGACTTGTCC +
Preference number: 2 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDTSRIL*ISVDLS
Trigger: GGACAAGTCAACTGAGATCCAGAGAATCCTGGATGT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAAACAGTGGATGTTGTTaGTCCTTTCAGTTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPNSGCC*SFQFSS
Trigger: GCTACTGAACTGAAAGGATCAACAACATCCACTGTT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR CAA 90 bp TCAATCAAGTCAGTGACTGGATCATCTCCTAAGGTTTCACCTGCTTaGCATCAGGTAGGTGAGATGAAAGTGATTTTATGGGTAGCTTTC +
Preference number: 2 (lower is better)
Translates to: SIKSVTGSSPKVSPA*HQVGEMKVILWVAF
Trigger: GAAAGCTACCCATAAAATCACTTTCATCTCACCTACCTGATGCAAAGCAGGTGAAACCTTAGGAGATGATCCAGTCACTGACTTGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCCTCAATCAAGTCAGTaGCTGGATCATCTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAPQSSQ*LDHLLR
Trigger: CCTTAGGAGATGATCCAGTCACTGACTTGATTGAGG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATACATCCAGGATTCTCTaGATCTCAGTTGACTTGTCC +
Preference number: 2 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHTSRIL*ISVDLS
Trigger: GGACAAGTCAACTGAGATCCAGAGAATCCTGGATGT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTATTAAGAGACAGTGGTaGCAACATCATCATCCTGGG +
Preference number: 2 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAIKRQW*QHHHPG
Trigger: CCCAGGATGATGATGTTGTCACCACTGTCTCTTAAT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTAACAGTGGATGTTGTTaGTCCTTTCAGTTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEANSGCC*SFQFSS
Trigger: GCTACTGAACTGAAAGGATCAACAACATCCACTGTT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTCAGTGCAAGAATACTaGATACACTTTGCAGTACAC +
Preference number: 2 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHSVQEY*IHFAVH
Trigger: GTGTACTGCAAAGTGTATGCAGTATTCTTGCACTGA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATGTACTGCACTGAAGTaGCAAAGTTCTGTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSCTALK*QSSVLP
Trigger: AGGCAAGACAGAACTTTGTCACTTCAGTGCAGTACA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTCTCTGGATCTCAGTTaGCTTGTCCTATACATCAAA +
Preference number: 2 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEASLDLS*LVLYIK
Trigger: TTTGATGTATAGGACAAGTCAACTGAGATCCAGAGA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTCAGTGCAAGAATACTaGATACACTTTGCAGTACAC +
Preference number: 2 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEASVQEY*IHFAVH
Trigger: GTGTACTGCAAAGTGTATGCAGTATTCTTGCACTGA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCTACTTCTCCAATATTaGGTAAATGTGTCTTTAGGG +
Preference number: 2 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEALLLQY*VNVSLG
Trigger: CCCTAAAGACACATTTACTCAATATTGGAGAAGTAG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTAAATACAGAGTAAGGTaGAGGAGGACTGTATGTATA +
Preference number: 2 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAKYRVR*RRTVCI
Trigger: TATACATACAGTCCTCCTTCACCTTACTCTGTATTT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR CAA 90 bp CAGTGTTTAGCATTCACATCCAGGATTCTCTGGATCTCAGTTGACTaGTCCTATACATCAAAATATGGCAATTTTTCAATCACAATACTG +
Preference number: 2 (lower is better)
Translates to: QCLAFTSRILWISVD*SYTSKYGNFSITIL
Trigger: CAGTATTGTGATTGAAAAATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGGATGTGAATGCTAAACACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTTTGCATCAGGTAGGTaGGATGAAAGTGATTTTATG +
Preference number: 2 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWFASGR*DESDFM
Trigger: CATAAAATCACTTTCATCTCACCTACCTGATGCAAA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTATACTGCATACACTTTaGAGTACACGAAATATCACA +
Preference number: 2 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIILHTL*STRNIT
Trigger: TGTGATATTTCGTGTACTGCAAAGTGTATGCAGTAT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR GCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTTCAGAAAAATGTACTaGACTGAAGTGACAAAGTTC +
Preference number: 2 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWFRKMY*TEVTKF
Trigger: GAACTTTGTCACTTCAGTGCAGTACATTTTTCTGAA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR GCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAATACTGCATACACTTTaGAGTACACGAAATATCACA +
Preference number: 2 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSILHTL*STRNIT
Trigger: TGTGATATTTCGTGTACTGCAAAGTGTATGCAGTAT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR CCA 72 bp GCTCTGTCTCCACAGCAGAGCACGGTACCTAACATGTaGCAGGACTCAATAAAAGGTGGGTCAGTGTATTTC +
Preference number: 3 (lower is better)
Translates to: ALSPQQSTVPNM*QDSIKGGSVYF
Trigger: GAAATACACTGACCCACCTTTTATTGAGTCCTGCCACATGTTAGGTACCGTGCTCTGCTGTGGAGACAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAAAGAAACTAGGCATATaGCAGAACACACCATCTCTG +
Preference number: 3 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPKKLGI*QNTPSL
Trigger: CAGAGATGGTGTGTTCTGCAATATGCCTAGTTTCTT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATAAGAAACTAGGCATATaGCAGAACACACCATCTCTG +
Preference number: 3 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHKKLGI*QNTPSL
Trigger: CAGAGATGGTGTGTTCTGCAATATGCCTAGTTTCTT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATAATACTGCATACACTTaGCAGTACACGAAATATCAC +
Preference number: 3 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDNTAYT*QYTKYH
Trigger: GTGATATTTCGTGTACTGCAAAGTGTATGCAGTATT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGAAGGTTTCACCTGCTTaGCATCAGGTAGGTGAGATG +
Preference number: 3 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWKVSPA*HQVGEM
Trigger: CATCTCACCTACCTGATGCAAAGCAGGTGAAACCTT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTTTGGCGAAAGGTCCTaGAGAATGCTGGATTACCAT +
Preference number: 3 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAFGERS*RMLDYH
Trigger: ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTTTTTGACCCTAGTATaGGCAATAGCCCTTTGCTAT +
Preference number: 3 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHFLTLV*AIALCY
Trigger: ATAGCAAAGGGCTATTGCCAATACTAGGGTCAAAAA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTTCTCTGGATCTCAGTaGACTTGTCCTATACATCAA +
Preference number: 3 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHFSGSQ*TCPIHQ
Trigger: TTGATGTATAGGACAAGTCAACTGAGATCCAGAGAA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR TCA 72 bp GAATTTGCACAATGGAAAACCACCTTGACCATCTCATaGCTTTATACAGGAATCGGAGGTAAGTGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: EFAQWKTTLTIS*LYTGIGGKCSF
Trigger: AAAGGAACACTTACCTCCGATTCCTGTATAAAGTCATGAGATGGTCAAGGTGGTTTTCCATTGTGCAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATAATACTGCATACACTTaGCAGTACACGAAATATCAC +
Preference number: 3 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHNTAYT*QYTKYH
Trigger: GTGATATTTCGTGTACTGCAAAGTGTATGCAGTATT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCATAGGACTTTCCATTaGTTTCAGAGTGCCTTAACT +
Preference number: 3 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAHRTFH*FQSALT
Trigger: AGTTAAGGCACTCTGAAACAAATGGAAAGTCCTATG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTTTTTGACCCTAGTATaGGCAATAGCCCTTTGCTAT +
Preference number: 3 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIFLTLV*AIALCY
Trigger: ATAGCAAAGGGCTATTGCCAATACTAGGGTCAAAAA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTTGAAGACAAAGGCTTaGCCCAAACATAACTCCTTT +
Preference number: 3 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEALKTKA*PKHNSF
Trigger: AAAGGAGTTATGTTTGGGCAAAGCCTTTGTCTTCAA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR TCA 72 bp GACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTaGGAATGCTGGATTACCATGTCCCTTAGAAATTTT +
Preference number: 3 (lower is better)
Translates to: DIDGKHILAKGP*ECWITMSLRNF
Trigger: AAAATTTCTAAGGGACATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR GCA 72 bp AAAGTGATTTTATGGGTAGCTTTCAGAAAAATGTACTaGACTGAAGTGACAAAGTTCTGTCTTGCCTGTTCT +
Preference number: 3 (lower is better)
Translates to: KVILWVAFRKMY*TEVTKFCLACS
Trigger: AGAACAGGCAAGACAGAACTTTGTCACTTCAGTGCAGTACATTTTTCTGAAAGCTACCCATAAAATCACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGGCTCCTAACCTACTTTaGAAAAAGGAAAGATTCCAA +
Preference number: 3 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWAPNLL*KKERFQ
Trigger: TTGGAATCTTTCCTTTTTCAAAAGTAGGTTAGGAGC...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACATAGGACTTTCCATTaGTTTCAGAGTGCCTTAACT +
Preference number: 3 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSHRTFH*FQSALT
Trigger: AGTTAAGGCACTCTGAAACAAATGGAAAGTCCTATG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR TCA 72 bp TTTAGCATTCACATCCAGGATTCTCTGGATCTCAGTTaGCTTGTCCTATACATCAAAATATGGCAATTTTTC +
Preference number: 3 (lower is better)
Translates to: FSIHIQDSLDLS*LVLYIKIWQFF
Trigger: GAAAAATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGGATGTGAATGCTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR CAA 72 bp TCTTCTCTAGCACCTCCTTCAGGGACCGTGAGCTCCTaGGGGTCACTGCTCTGTCTCCACAGCAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: SSLAPPSGTVSS*GSLLCLHSRAR
Trigger: CCGTGCTCTGCTGTGGAGACAGAGCAGTGACCCCAAGGAGCTCACGGTCCCTGAAGGAGGTGCTAGAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATGGCCCGCTCCATGGTTaGCACCGCGCGCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHGPLHG*HRAPRR
Trigger: CCTCCGAGGCGCGCGGTGCCAACCATGGAGCGGGCC...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR CCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCTTTGGGCTGTCCCGTaGACTCGTCCCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDLWAVP*TRPSPQ
Trigger: CTGGGGTGAGGGACGAGTCCACGGGACAGCCCAAAG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATAGGGAAACAGTCCTCTaGCACGTGGGTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDRETVL*HVGQGL
Trigger: GAGGCCCTGACCCACGTGTCAGAGGACTGTTTCCCT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCCACTCAGTTCCGCTTaGCCTGGCCGCTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDPLSSA*PGRFPH
Trigger: ATGGGGAAAGCGGCCAGGCCAAGCGGAACTGAGTGG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAGCTGCTGCCCGAAGCTaGGGCCGGCCCGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSAAARS*GRPAPW
Trigger: CCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGC...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCTCCTTCAGGGACCGTaGGCTCCTTGGGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHLLQGP*APWGHC
Trigger: GCAGTGACCCCAAGGAGCTCACGGTCCCTGAAGGAG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCCTCCCCCTTCGTCCTaGTCCAGTCGGGCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAPPPSS*SSRAGF
Trigger: AAAGCCGGCCCGACTGGAGCAGGACGAAGGGGGAGG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR CCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCACTTTTCCACCCCAGCTaGGGTCCGTCCCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPLFHPS*GPSLRR
Trigger: TCTTCTGAGGGACGGACCCCAGCTGGGGTGGAAAAG...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR CCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATGCCTCGGAGGCTCTCTaGTACTGCTTTTCCACCCCA +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDASEAL*YCFSTP
Trigger: TGGGGTGGAAAAGCAGTACCAGAGAGCCTCCGAGGC...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR CCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCAGTCCTCTGACACGTaGGTCAGGGCCTCATACAGT +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDQSSDT*VRASYS
Trigger: ACTGTATGAGGCCCTGACCCACGTGTCAGAGGACTG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCAGTTCCGCTTGGCCTaGCCGCTTTCCCCATTAATC +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDQFRLA*PLSPLI
Trigger: GATTAATGGGGAAAGCGGCCAGGCCAAGCGGAACTG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATCTGCACGAGGACTCTaGTGCAAGGGACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPSARGL*CKGQEQ
Trigger: TTGCTCTTGTCCCTTGCAGCAGAGTCCTCGTGCAGA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTGGGCTCACCAAGCGCTaGCACATGTCCCACAATGCC +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAGLTKR*HMSHNA
Trigger: GGCATTGTGGGACATGTGGCAGCGCTTGGTGAGCCC...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTGGGCTCACCAAGCGCTaGCACATGTCCCACAATGCC +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIGLTKR*HMSHNA
Trigger: GGCATTGTGGGACATGTGGCAGCGCTTGGTGAGCCC...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAATCAGCATCTTCTCCTaGTGTTCTGCAAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPISIFS*CSARAC
Trigger: GCAGGCCCTTGCAGAACAGCAGGAGAAGATGCTGAT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATGCTGGGGCTGCTGCTaGTGTCGCTGCTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSCWGCC*CRCCPK
Trigger: CTTCGGGCAGCAGCGACAGCAGCAGCAGCCCCAGCA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR CCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAAGGCAGAGATTTTCCTaGTTGGTGTTCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPRQRFS*LVFQGH
Trigger: GTGCCCCTGGAACACCAACCAGGAAAATCTCTGCCT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCCACTCAGTTCCGCTTaGCCTGGCCGCTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIPLSSA*PGRFPH
Trigger: ATGGGGAAAGCGGCCAGGCCAAGCGGAACTGAGTGG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCACACAGGGATGGTGTaGACTCTCTCAGCAAACCAT +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDHTGMV*TLSANH
Trigger: ATGGTTTGCTGAGAGAGTTCACACCATCCCTGTGTG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCACACACAGGGATGGTGTaGACTCTCTCAGCAAACCAT +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPHTGMV*TLSANH
Trigger: ATGGTTTGCTGAGAGAGTTCACACCATCCCTGTGTG...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTGGTCCCCTTCATCATaGTCAAACCTTGGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDWSPSS*SNLGGV
Trigger: AACCCCTCCAAGGTTTGATCATGATGAAGGGGACCA...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATGTCCCACCGTTTCCTaGTTTCTTGTTGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPCPTVS*FLVDGL
Trigger: CAGGCCATCAACAAGAAATCAGGAAACGGTGGGACA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCACTTGTTCTCCAGCAGTaGAGTCTCATAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPLVLQQ*SLIELS
Trigger: GCTCAGCTCTATGAGACTTCACTGCTGGAGAACAAG...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACTCCTTCAGGGACCGTaGGCTCCTTGGGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSLLQGP*APWGHC
Trigger: GCAGTGACCCCAAGGAGCTCACGGTCCCTGAAGGAG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATGTGATCGTCCAGCCATaGTTCGACCGAGTCCTGATC +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHVIVQP*FDRVLI
Trigger: GATCAGGACTCGGTCGAAGCATGGCTGGACGATCAC...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTGCTCCTTGGGGTCACTaGTCTGTCTCCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIAPWGH*SVSTAE
Trigger: CTCTGCTGTGGAGACAGAGCAGTGACCCCAAGGAGC...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCACCATTTGCTTGGCCATaGCTCTCTCCACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPPFAWP*LSPLLH
Trigger: ATGAAGCAGTGGAGAGAGCCATGGCCAAGCAAATGG...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCCGTCATGTTGCCTTTaGGCTGTCCCGTGGACTCGT +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIPSCCL*AVPWTR
Trigger: ACGAGTCCACGGGACAGCCCAAAGGCAACATGACGG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATGGTCAACTTCTGCATTaGACCGAGGATCCTCATATG +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDGQLLH*TEDPHM
Trigger: CATATGAGGATCCTCGGTTCAATGCAGAAGTTGACC...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATATGGTGTTCCATGATTaGATGGCAGTAAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDMVFHD*MAVKLG
Trigger: GCCCAGCTTTACTGCCATTCAATCATGGAACACCAT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCAATGGAGAGGCCACTaGGAATCTGATTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHQWRGH*ESDCLD
Trigger: GTCCAGGCAATCAGATTCTCAGTGGCCTCTCCATTG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATGCACGAGGACTCTGCTaGAAGGGACAAGAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHARGLC*KGQEQD
Trigger: ATCTTGCTCTTGTCCCTTGCAGCAGAGTCCTCGTGC...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTCTGCACGAGGACTCTaGTGCAAGGGACAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHSARGL*CKGQEQ
Trigger: TTGCTCTTGTCCCTTGCAGCAGAGTCCTCGTGCAGA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAACTGCTTCATACATCTaGGTGTTCTGGATCCCCAAG +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPTASYI*VFWIPK
Trigger: CTTGGGGATCCAGAACACGCAGATGTATGAAGCAGT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATGTTCTGCAAGGGCCTaGCATTTCTGCCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPCSARA*HFCLFF
Trigger: AAAGAACAGGCAGAAATGGCAGGCCCTTGCAGAACA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATATCAGCATCTTCTCCTaGTGTTCTGCAAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHISIFS*CSARAC
Trigger: GCAGGCCCTTGCAGAACAGCAGGAGAAGATGCTGAT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCAGTCCTCTGACACGTaGGTCAGGGCCTCATACAGT +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIQSSDT*VRASYS
Trigger: ACTGTATGAGGCCCTGACCCACGTGTCAGAGGACTG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCAGTTCCGCTTGGCCTaGCCGCTTTCCCCATTAATC +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIQFRLA*PLSPLI
Trigger: GATTAATGGGGAAAGCGGCCAGGCCAAGCGGAACTG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTATTCGGTGTGGCCTCTaGTACCTTCCTTGCACACAG +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIIRCGL*YLPCTQ
Trigger: CTGTGTGCAAGGAAGGTATCAGAGGCCACACCGAAT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCTTGTTCTCCAGCAGTaGAGTCTCATAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHLVLQQ*SLIELS
Trigger: GCTCAGCTCTATGAGACTTCACTGCTGGAGAACAAG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATACAGAACCTCCAATGTaGCCATTTGCTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHTEPPM*PFAWPW
Trigger: CCATGGCCAAGCAAATGGTCACATTGGAGGTTCTGT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATGCAGCAAACATGCACTaGGCTGTATTAAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDAANMH*AVLKAC
Trigger: ACATGCCTTTAATACAGCTCAGTGCATGTTTGCTGC...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTTATTCACACCACGGTaGTCCAAATCGTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDLFTPR*SKSWLS
Trigger: ACTAAGCCACGATTTGGATCACCGTGGTGTGAATAA...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATAGCAGATGGCATCTATaGACCCAACTTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDSRWHL*TQLAYL
Trigger: CAAGTATGCAAGTTGGGTTCATAGATGCCATCTGCT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAAACTTCAACTCTGCATaGAATAGGCCACTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPNFNSA*NRPLSS
Trigger: GGAACTGAGTGGCCTATTTCATGCAGAGTTGAAGTT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAAGGTAAAGTCCCAGTaGTCGTCCAGCCATGCTTCG +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIKVKSQ*SSSHAS
Trigger: CGAAGCATGGCTGGACGATCACTGGGACTTTACCTT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATATTAAGAGACAGTGGTaGCAACATCATCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDIKRQW*QHHHPG
Trigger: CCCAGGATGATGATGTTGTCACCACTGTCTCTTAAT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAGGGGCACTGTTATCTaGACGAGGACTCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIRGTVI*TRTLLQ
Trigger: TTGCAGCAGAGTCCTCGTGCAGATAACAGTGCCCCT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTAGGGGCACTGTTATCTaGACGAGGACTCTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEARGTVI*TRTLLQ
Trigger: TTGCAGCAGAGTCCTCGTGCAGATAACAGTGCCCCT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCCACATGTCCCACAATaGCTTTGTTCCATTCTAAGC +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDPHVPQ*LCSILS
Trigger: GCTTAGAATGGAACAAAGGCATTGTGGGACATGTGG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTCCAATGTGACCATTTaGTTGGCCATGGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHSNVTI*LAMALS
Trigger: GGAGAGAGCCATGGCCAAGCAAATGGTCACATTGGA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCTTCTCCTGCTGTTCTaGAAGGGCCTGCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEALLLLF*KGLPFL
Trigger: CAGAAATGGCAGGCCCTTGCAGAACAGCAGGAGAAG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCTTCTCCTGCTGTTCTaGAAGGGCCTGCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAILLLLF*KGLPFL
Trigger: CAGAAATGGCAGGCCCTTGCAGAACAGCAGGAGAAG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAGCTCCTTGGGGTCACTaGTCTGTCTCCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSAPWGH*SVSTAE
Trigger: CTCTGCTGTGGAGACAGAGCAGTGACCCCAAGGAGC...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCCTTGCACACAGGGATaGTGTGAACTCTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHPCTQG*CELSQQ
Trigger: TTGCTGAGAGAGTTCACACCATCCCTGTGTGCAAGG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATGAGCAAGATTCGGTGTaGCCTCTGATACCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHEQDSV*PLIPSL
Trigger: CAAGGAAGGTATCAGAGGCCACACCGAATCTTGCTC...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAGGCAGAGATTTTCCTaGTTGGTGTTCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIRQRFS*LVFQGH
Trigger: GTGCCCCTGGAACACCAACCAGGAAAATCTCTGCCT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCCATTTGCTTGGCCATaGCTCTCTCCACTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHPFAWP*LSPLLH
Trigger: ATGAAGCAGTGGAGAGAGCCATGGCCAAGCAAATGG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAGTAAAGCTGGGCAAGTaGATGTTCACTTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPVKLGK*MFTSLY
Trigger: ATACAGCGAAGTGAACATCCACTTGCCCAGCTTTAC...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAACATCCAGGATTCTCTaGATCTCAGTTGACTTGTCC +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPTSRIL*ISVDLS
Trigger: GGACAAGTCAACTGAGATCCAGAGAATCCTGGATGT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTTCCTGATTTCTTGTTaGTGGCCTGGGCTACACCAA +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHFLISC*WPGLHQ
Trigger: TTGGTGTAGCCCAGGCCATCAACAAGAAATCAGGAA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTGTCCCACCGTTTCCTaGTTTCTTGTTGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEACPTVS*FLVDGL
Trigger: CAGGCCATCAACAAGAAATCAGGAAACGGTGGGACA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAGGTCAAGCAGCACCTaGTTTCTCTTGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIRSSST*FLLFSS
Trigger: GCTGGAGAACAAGAGAAATCAGGTGCTGCTTGACCT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTACAGAACCTCCAATGTaGCCATTTGCTTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEATEPPM*PFAWPW
Trigger: CCATGGCCAAGCAAATGGTCACATTGGAGGTTCTGT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTCTGCTGCTGAAGCATaGTACGACAGAACCTCCAAT +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHSAAEA*YDRTSN
Trigger: ATTGGAGGTTCTGTCGTATCATGCTTCAGCAGCAGA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCACAGTGGGTTCTATGTTaGGTTCTTTTCTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPQWVLC*VLFSLC
Trigger: ACAGAGAGAGAAAAGAACTCAACATAGAACCCACTG...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATAACAGTGGATGTTGTTaGTCCTTTCAGTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDNSGCC*SFQFSS
Trigger: GCTACTGAACTGAAAGGATCAACAACATCCACTGTT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTTGGCGAAAGGTCCTTaGGAATGCTGGATTACCATG +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHLAKGP*ECWITM
Trigger: CATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCATGAAAGAGTCATCTaGAATGACTCTCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDHERVI*NDSRDG
Trigger: TCCATCACGAGAGTCATTTCAGATGACTCTTTCATG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATAATTTGGTCAACTTCTaGATTGAACCGAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDNLVNF*IEPRIL
Trigger: GAGGATCCTCGGTTCAATGCAGAAGTTGACCAAATT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTTCATCTGGAAGTTCTaGACAAGGTTGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDFIWKF*TRLRSV
Trigger: TACTGACCTCAACCTTGTGCAGAACTTCCAGATGAA...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAAAGGTTCCGTCATGTTaGCTTTGGGCTGTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSKVPSC*LWAVPW
Trigger: CCACGGGACAGCCCAAAGGCAACATGACGGAACCTT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS-3UTR CCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATAGAGATTTTCCTGGTTaGTGTTCCAGGGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHRDFPG*CSRGTV
Trigger: AACAGTGCCCCTGGAACACCAACCAGGAAAATCTCT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAACGGTACCTAACATGTaGCAGGACTCAATAAAAGGT +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPTVPNM*QDSIKG
Trigger: ACCTTTTATTGAGTCCTGCCACATGTTAGGTACCGT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR CAA 72 bp TCAGTGACTGGATCATCTCCTAAGGTTTCACCTGCTTaGCATCAGGTAGGTGAGATGAAAGTGATTTTATGG +
Preference number: 4 (lower is better)
Translates to: SVTGSSPKVSPA*HQVGEMKVILW
Trigger: CCATAAAATCACTTTCATCTCACCTACCTGATGCAAAGCAGGTGAAACCTTAGGAGATGATCCAGTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAATTCGGTGTGGCCTCTaGTACCTTCCTTGCACACAG +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSIRCGL*YLPCTQ
Trigger: CTGTGTGCAAGGAAGGTATCAGAGGCCACACCGAAT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATGCTGTGACATCCAAATaGCTAGAAATATCCTTCACT +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDAVTSK*LEISFT
Trigger: AGTGAAGGATATTTCTAGTCATTTGGATGTCACAGC...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTGGTCAACTTCTGCATTaGACCGAGGATCCTCATATG +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIGQLLH*TEDPHM
Trigger: CATATGAGGATCCTCGGTTCAATGCAGAAGTTGACC...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATCCTCACACTCCATGTaGAACACACTAGAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPSSHSM*NTLEKE
Trigger: TTCTTTTTCTAGTGTGTTTCACATGGAGTGTGAGGA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTTCTTCCTCTGCTGCTaGAGCATGATACGACAGAAC +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAFFLCC*SMIRQN
Trigger: GTTCTGTCGTATCATGCTTCAGCAGCAGAGGAAGAA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATCAGTCAGCTTGTTCTaGATTTTGCCTGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPSVSLF*ILPAFR
Trigger: TCTAAAAGCAGGCAAAATTCAGAACAAGCTGACTGA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATAGGCCACTGAGAATCTaGTTGCCTGGACTATTAAGA +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHRPLRI*LPGLLR
Trigger: TCTTAATAGTCCAGGCAATCAGATTCTCAGTGGCCT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACAATGGAGAGGCCACTaGGAATCTGATTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSQWRGH*ESDCLD
Trigger: GTCCAGGCAATCAGATTCTCAGTGGCCTCTCCATTG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGCAATGGAGAGGCCACTaGGAATCTGATTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RRLILISSILGSNSQQSKQWRGH*ESDCLD
Trigger: GTCCAGGCAATCAGATTCTCAGTGGCCTCTCCATTG...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR TCA 90 bp CTTCTTAGCATCCCCAAATCAATTTGTTGGAGATTAGCACATAGTAGGCACTCATCTGCTATCCGTTGTTaGATAGGCCAGGGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LLSIPKSICWRLAHSRHSSAIRC*IGQGFV
Trigger: TACAAAACCCTGGCCTATTCAACAACGGATAGCAGA...TGAGTGCCTACTATGTGCTAATCTCCAACAAATTGATTTGGGGATGCTAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTGTACTGCACTGAAGTaGCAAAGTTCTGTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHCTALK*QSSVLP
Trigger: AGGCAAGACAGAACTTTGTCACTTCAGTGCAGTACA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATCTCTGGATCTCAGTTaGCTTGTCCTATACATCAAA +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPSLDLS*LVLYIK
Trigger: TTTGATGTATAGGACAAGTCAACTGAGATCCAGAGA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCCGAGGATCCTCATATaGATCTTTGATGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHPRILI*IFDVQG
Trigger: CCCTTGAACATCAAAGATGCATATGAGGATCCTCGG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCATGGCTCTCTCCACTaGTTCATACATCTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAHGSLH*FIHLRV
Trigger: AACACGCAGATGTATGAAGCAGTGGAGAGAGCCATG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTCCAATGTGACCATTTaGTTGGCCATGGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWSNVTI*LAMALS
Trigger: GGAGAGAGCCATGGCCAAGCAAATGGTCACATTGGA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCCGAATTGTACACAGTaGTGTTTCCAGATCAGACAG +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHPNCTQ*CFQIRQ
Trigger: CTGTCTGATCTGGAAACAGCACTGTGTACAATTCGG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTAGGGCCTCATACAGTTaGAAGCAGATGGCATCTATG +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEARASYS*KQMASM
Trigger: CATAGATGCCATCTGCTTGCAACTGTATGAGGCCCT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATCAGTGCAAGAATACTaGATACACTTTGCAGTACAC +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPSVQEY*IHFAVH
Trigger: GTGTACTGCAAAGTGTATGCAGTATTCTTGCACTGA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGGAGCAAGATTCGGTGTaGCCTCTGATACCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWEQDSV*PLIPSL
Trigger: CAAGGAAGGTATCAGAGGCCACACCGAATCTTGCTC...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTTCTTGTTGATGGCCTaGGCTACACCAACAACCTCT +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIFLLMA*ATPTTS
Trigger: AGAGGTTGTTGGTGTAGCCCAGGCCATCAACAAGAA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATGAATCGGGACATAGATaGAAAACACATTTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDESGHR*KTHFGE
Trigger: TTCGCCAAAATGTGTTTTCCATCTATGTCCCGATTC...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAAGGTCAAGCAGCACCTaGTTTCTCTTGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSRSSST*FLLFSS
Trigger: GCTGGAGAACAAGAGAAATCAGGTGCTGCTTGACCT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAAATCTTCATCCACTATaGAAATGGTGCATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPNLHPL*KWCISA
Trigger: TGCAGAAATGCACCATTTTCATAGTGGATGAAGATT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCCAAGCCACAAAAGATaGCAAAAGCTTCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHPSHKR*QKLPET
Trigger: AGTTTCTGGAAGCTTTTGTCATCTTTTGTGGCTTGG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTCTGCTGCTGAAGCATaGTACGACAGAACCTCCAAT +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWSAAEA*YDRTSN
Trigger: ATTGGAGGTTCTGTCGTATCATGCTTCAGCAGCAGA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTTATTCACACCACGGTaGTCCAAATCGTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEALFTPR*SKSWLS
Trigger: ACTAAGCCACGATTTGGATCACCGTGGTGTGAATAA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CTTCTTAGCATCCCCAAATCAATTTGTTGGAGATTAGCACATAGTAGGCACTCAAGGCACTGGTCAAAATaGTGGTGTTCCATGATTGAA +
Preference number: 4 (lower is better)
Translates to: LLSIPKSICWRLAHSRHSRHWSK*WCSMIE
Trigger: TTCAATCATGGAACACCATCATTTTGACCAGTGCCT...TGAGTGCCTACTATGTGCTAATCTCCAACAAATTGATTTGGGGATGCTAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAGGCCACTGAGAATCTaGTTGCCTGGACTATTAAGA +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIRPLRI*LPGLLR
Trigger: TCTTAATAGTCCAGGCAATCAGATTCTCAGTGGCCT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTCTGCTATCCGTTGTTaGATAGGCCAGGGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEASAIRC*IGQGFV
Trigger: TACAAAACCCTGGCCTATTCAACAACGGATAGCAGA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAACTTCAACTCTGCATaGAATAGGCCACTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAINFNSA*NRPLSS
Trigger: GGAACTGAGTGGCCTATTTCATGCAGAGTTGAAGTT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATTTTCTAACAAAGTATaGGAAGGTAAAGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPFSNKV*EGKVPV
Trigger: CACTGGGACTTTACCTTCTCATACTTTGTTAGAAAA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTGTACTGCACTGAAGTaGCAAAGTTCTGTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAICTALK*QSSVLP
Trigger: AGGCAAGACAGAACTTTGTCACTTCAGTGCAGTACA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGCCTCAATCAAGTCAGTaGCTGGATCATCTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWPQSSQ*LDHLLR
Trigger: CCTTAGGAGATGATCCAGTCACTGACTTGATTGAGG...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCACACAGAGGTTAAGTaGCTTACACAAATCCACCCA +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIHTEVK*LTQIHP
Trigger: TGGGTGGATTTGTGTAAGTCACTTAACCTCTGTGTG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCCACATGTCCCACAATaGCTTTGTTCCATTCTAAGC +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAPHVPQ*LCSILS
Trigger: GCTTAGAATGGAACAAAGGCATTGTGGGACATGTGG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCCGAGGATCCTCATATaGATCTTTGATGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAPRILI*IFDVQG
Trigger: CCCTTGAACATCAAAGATGCATATGAGGATCCTCGG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATGTGCATTTCTGCACTTaGATGAAAGAGATAATAGTG +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDVHFCT*MKEIIV
Trigger: CACTATTATCTCTTTCATGCAAGTGCAGAAATGCAC...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGCATGGCTCTCTCCACTaGTTCATACATCTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWHGSLH*FIHLRV
Trigger: AACACGCAGATGTATGAAGCAGTGGAGAGAGCCATG...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTGCAGCAATCAGCAATaGAAGTATCTCCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAICSNQQ*KYLQVS
Trigger: ACTGACCTGGAGATACTTGCATTGCTGATTGCTGCA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTGTTCTGCAAGGGCCTaGCATTTCTGCCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWCSARA*HFCLFF
Trigger: AAAGAACAGGCAGAAATGGCAGGCCCTTGCAGAACA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTATTTTACACACCAGTaGCACAAAGGGGCAACCTTA +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHYFTHQ*HKGATL
Trigger: TAAGGTTGCCCCTTTGTGGCACTGGTGTGTAAAATA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACCTTGCACACAGGGATaGTGTGAACTCTCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSPCTQG*CELSQQ
Trigger: TTGCTGAGAGAGTTCACACCATCCCTGTGTGCAAGG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTTCTTGTTGATGGCCTaGGCTACACCAACAACCTCT +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWFLLMA*ATPTTS
Trigger: AGAGGTTGTTGGTGTAGCCCAGGCCATCAACAAGAA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAATCCTTACTGACATCTaGGATATTAAGTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPILTDI*DIKWFH
Trigger: ATGGAACCACTTAATATCCCAGATGTCAGTAAGGAT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTACATCTGCGTGTTCTaGATCCCCAAGCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWYICVF*IPKPQK
Trigger: CTTTTGTGGCTTGGGGATCCAGAACACGCAGATGTA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATTCCTGATTTCTTGTTaGTGGCCTGGGCTACACCAA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSFLISC*WPGLHQ
Trigger: TTGGTGTAGCCCAGGCCATCAACAAGAAATCAGGAA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATTCTTCCTCTGCTGCTaGAGCATGATACGACAGAAC +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSFFLCC*SMIRQN
Trigger: GTTCTGTCGTATCATGCTTCAGCAGCAGAGGAAGAA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAATGGTGTTCCATGATTaGATGGCAGTAAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSMVFHD*MAVKLG
Trigger: GCCCAGCTTTACTGCCATTCAATCATGGAACACCAT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGATGGTGTTCCATGATTaGATGGCAGTAAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RRLILISSILGSNSQQSKMVFHD*MAVKLG
Trigger: GCCCAGCTTTACTGCCATTCAATCATGGAACACCAT...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATAATGATGGTGTTCCATaGTTGAATGGCAGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHNDGVP*LNGSKA
Trigger: AGCTTTACTGCCATTCAATCATGGAACACCATCATT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CTTCTTAGCATCCCCAAATCAATTTGTTGGAGATTAGCACATAGTAGGCACTCAAATGATGGTGTTCCATaGTTGAATGGCAGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: LLSIPKSICWRLAHSRHSNDGVP*LNGSKA
Trigger: AGCTTTACTGCCATTCAATCATGGAACACCATCATT...TGAGTGCCTACTATGTGCTAATCTCCAACAAATTGATTTGGGGATGCTAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAGGCACTGGTCAAAATaGTGGTGTTCCATGATTGAA +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIRHWSK*WCSMIE
Trigger: TTCAATCATGGAACACCATCATTTTGACCAGTGCCT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACAGCAAACCATGCATTaGCCATTTCTCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSQQTMH*PFLWWL
Trigger: AAGCCACCAGAGAAATGGTCAATGCATGGTTTGCTG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACCTCAATCAAGTCAGTaGCTGGATCATCTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSPQSSQ*LDHLLR
Trigger: CCTTAGGAGATGATCCAGTCACTGACTTGATTGAGG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTCTCTGGATCTCAGTTaGCTTGTCCTATACATCAAA +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHSLDLS*LVLYIK
Trigger: TTTGATGTATAGGACAAGTCAACTGAGATCCAGAGA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATTGGCGAAAGGTCCTTaGGAATGCTGGATTACCATG +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSLAKGP*ECWITM
Trigger: CATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGCACACAGAGGTTAAGTaGCTTACACAAATCCACCCA +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWHTEVK*LTQIHP
Trigger: TGGGTGGATTTGTGTAAGTCACTTAACCTCTGTGTG...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGCAGCAAACCATGCATTaGCCATTTCTTTTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWQQTMH*PFLLAR
Trigger: CCTTGCCAAAAGAAATGGTCAATGCATGGTTTGCTG...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAATTTGGTCAACTTCTaGATTGAACCGAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAINLVNF*IEPRIL
Trigger: GAGGATCCTCGGTTCAATGCAGAAGTTGACCAAATT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAACTGCTTCATACATCTaGGTGTTCTGGATCCCCAAG +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSTASYI*VFWIPK
Trigger: CTTGGGGATCCAGAACACGCAGATGTATGAAGCAGT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGCCGAATTGTACACAGTaGTGTTTCCAGATCAGACAG +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWPNCTQ*CFQIRQ
Trigger: CTGTCTGATCTGGAAACAGCACTGTGTACAATTCGG...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTTCATCTGGAAGTTCTaGACAAGGTTGAGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIFIWKF*TRLRSV
Trigger: TACTGACCTCAACCTTGTGCAGAACTTCCAGATGAA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTCTCTCAGCAAACCATaGATTGACCATTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAISLSKP*IDHFSG
Trigger: ACCAGAGAAATGGTCAATGCATGGTTTGCTGAGAGA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR GCA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATATACTGCATACACTTTaGAGTACACGAAATATCACA +
Preference number: 4 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDILHTL*STRNIT
Trigger: TGTGATATTTCGTGTACTGCAAAGTGTATGCAGTAT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTATTTTACACACCAGTaGCACAAAGGGGCAACCTTA +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIYFTHQ*HKGATL
Trigger: TAAGGTTGCCCCTTTGTGGCACTGGTGTGTAAAATA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAGCAGATATCAGTCCATaGATATGCAAGAAAATTTTG +
Preference number: 4 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPADISP*ICKKIL
Trigger: CAAAATTTTCTTGCATATCCATGGACTGATATCTGC...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTACCTCATGTTTCATCTaGAAGTTCTGCACAAGGTTG +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAITSCFI*KFCTRL
Trigger: CAACCTTGTGCAGAACTTCCAGATGAAACATGAGGT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGGTAAAGCTGGGCAAGTaGATGTTCACTTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWVKLGK*MFTSLY
Trigger: ATACAGCGAAGTGAACATCCACTTGCCCAGCTTTAC...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATATTGACCATTTCTTTTaGCAAGGTTCCGTCATGTTG +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHIDHFF*QGSVML
Trigger: CAACATGACGGAACCTTGCCAAAAGAAATGGTCAAT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTGCTGTGACATCCAAATaGCTAGAAATATCCTTCACT +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAAVTSK*LEISFT
Trigger: AGTGAAGGATATTTCTAGTCATTTGGATGTCACAGC...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTCCTCACACTCCATGTaGAACACACTAGAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEASSHSM*NTLEKE
Trigger: TTCTTTTTCTAGTGTGTTTCACATGGAGTGTGAGGA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAGCAGCAAACATGCACTaGGCTGTATTAAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSAANMH*AVLKAC
Trigger: ACATGCCTTTAATACAGCTCAGTGCATGTTTGCTGC...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGTTATTCACACCACGGTaGTCCAAATCGTGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: RRLILISSILGSNSQQSKLFTPR*SKSWLS
Trigger: ACTAAGCCACGATTTGGATCACCGTGGTGTGAATAA...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAATGATGGTGTTCCATaGTTGAATGGCAGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAINDGVP*LNGSKA
Trigger: AGCTTTACTGCCATTCAATCATGGAACACCATCATT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGAGGCACTGGTCAAAATaGTGGTGTTCCATGATTGAA +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWRHWSK*WCSMIE
Trigger: TTCAATCATGGAACACCATCATTTTGACCAGTGCCT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGAGGCCACTGAGAATCTaGTTGCCTGGACTATTAAGA +
Preference number: 4 (lower is better)
Translates to: RRLILISSILGSNSQQSKRPLRI*LPGLLR
Trigger: TCTTAATAGTCCAGGCAATCAGATTCTCAGTGGCCT...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATCTGCTATCCGTTGTTaGATAGGCCAGGGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSSAIRC*IGQGFV
Trigger: TACAAAACCCTGGCCTATTCAACAACGGATAGCAGA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAAGCAGATGGCATCTATaGACCCAACTTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSSRWHL*TQLAYL
Trigger: CAAGTATGCAAGTTGGGTTCATAGATGCCATCTGCT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGAGCAGATGGCATCTATaGACCCAACTTGCATACTTG +
Preference number: 4 (lower is better)
Translates to: RRLILISSILGSNSQQSKSRWHL*TQLAYL
Trigger: CAAGTATGCAAGTTGGGTTCATAGATGCCATCTGCT...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGACCTTGACCATCTCATaGCTTTATACAGGAATCGGA +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWTLTIS*LYTGIG
Trigger: TCCGATTCCTGTATAAAGTCATGAGATGGTCAAGGT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATGCAGCAATCAGCAATaGAAGTATCTCCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSCSNQQ*KYLQVS
Trigger: ACTGACCTGGAGATACTTGCATTGCTGATTGCTGCA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTCTCTCAGCAAACCATaGATTGACCATTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAISLSKP*IDHFFW
Trigger: CCAAAAGAAATGGTCAATGCATGGTTTGCTGAGAGA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS-3UTR CCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGACCTCATGTTTCATCTaGAAGTTCTGCACAAGGTTG +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWTSCFI*KFCTRL
Trigger: CAACCTTGTGCAGAACTTCCAGATGAAACATGAGGT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGGTAAAGCTGGGCAAGTaGATGTTCACTTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: RRLILISSILGSNSQQSKVKLGK*MFTSLY
Trigger: ATACAGCGAAGTGAACATCCACTTGCCCAGCTTTAC...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAACATCCAGGATTCTCTaGATCTCAGTTGACTTGTCC +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSTSRIL*ISVDLS
Trigger: GGACAAGTCAACTGAGATCCAGAGAATCCTGGATGT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTGAATCGGGACATAGATaGAAAACACATTTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIESGHR*KTHFGE
Trigger: TTCGCCAAAATGTGTTTTCCATCTATGTCCCGATTC...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTACAACATCATCATCCTaGGTTTGTACCTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAITTSSS*VCTLKQ
Trigger: TTGCTTCAAGGTACAAACCCAGGATGATGATGTTGT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATGGACTCAATAAAAGGTaGGTCAGTGTATTTCTGATA +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHGLNKR*VSVFLI
Trigger: TATCAGAAATACACTGACCCACCTTTTATTGAGTCC...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
3UTR CAA 72 bp TTAAGAGACAGTGGTGACAACATCATCATCCTGGGTTaGTACCTTGAAGCAATATACTCAATGAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LRDSGDNIIILG*YLEAIYSMSSK
Trigger: TTTAGAGCTCATTGAGTATATTGCTTCAAGGTACAAACCCAGGATGATGATGTTGTCACCACTGTCTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACCAAGCCACAAAAGATaGCAAAAGCTTCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSPSHKR*QKLPET
Trigger: AGTTTCTGGAAGCTTTTGTCATCTTTTGTGGCTTGG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTCAGTCAGCTTGTTCTaGATTTTGCCTGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWSVSLF*ILPAFR
Trigger: TCTAAAAGCAGGCAAAATTCAGAACAAGCTGACTGA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACAGTGGGTTCTATGTTaGGTTCTTTTCTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSQWVLC*VLFSLC
Trigger: ACAGAGAGAGAAAAGAACTCAACATAGAACCCACTG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGCAGTGGGTTCTATGTTaGGTTCTTTTCTCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RRLILISSILGSNSQQSKQWVLC*VLFSLC
Trigger: ACAGAGAGAGAAAAGAACTCAACATAGAACCCACTG...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAAACAGTGGATGTTGTTaGTCCTTTCAGTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSNSGCC*SFQFSS
Trigger: GCTACTGAACTGAAAGGATCAACAACATCCACTGTT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTTTGCATCAGGTAGGTaGGATGAAAGTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIFASGR*DESDFM
Trigger: CATAAAATCACTTTCATCTCACCTACCTGATGCAAA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTTTGCATCAGGTAGGTaGGATGAAAGTGATTTTATG +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAFASGR*DESDFM
Trigger: CATAAAATCACTTTCATCTCACCTACCTGATGCAAA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACATGAAAGAGTCATCTaGAATGACTCTCGTGATGGA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSHERVI*NDSRDG
Trigger: TCCATCACGAGAGTCATTTCAGATGACTCTTTCATG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTAATGGAAAACCACCTTaGCCATCTCATGACTTTATA +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEANGKPP*PSHDFI
Trigger: TATAAAGTCATGAGATGGTCAAGGTGGTTTTCCATT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAGAAACCACTGACAGGTaGAGAATTTGCACAATGGAA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSETTDR*RICTME
Trigger: TTCCATTGTGCAAATTCTTCACCTGTCAGTGGTTTC...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTGTGCATTTCTGCACTTaGATGAAAGAGATAATAGTG +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAVHFCT*MKEIIV
Trigger: CACTATTATCTCTTTCATGCAAGTGCAGAAATGCAC...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCACTTAAAATCCATCTaGAAAGAACCTCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHHLKSI*KEPHVS
Trigger: TGAAACATGAGGTTCTTTGCAGATGGATTTTAAGTG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CTTCTTAGCATCCCCAAATCAATTTGTTGGAGATTAGCACATAGTAGGCACTCATCTATGAACCCAACTTaGATACTTGGGATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LLSIPKSICWRLAHSRHSSMNPT*ILGILF
Trigger: AAACAAAATCCCAAGTATGCAAGTTGGGTTCATAGA...TGAGTGCCTACTATGTGCTAATCTCCAACAAATTGATTTGGGGATGCTAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTGGACTCAATAAAAGGTaGGTCAGTGTATTTCTGATA +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAGLNKR*VSVFLI
Trigger: TATCAGAAATACACTGACCCACCTTTTATTGAGTCC...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAACGGTACCTAACATGTaGCAGGACTCAATAAAAGGT +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSTVPNM*QDSIKG
Trigger: ACCTTTTATTGAGTCCTGCCACATGTTAGGTACCGT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAAACTTCTTCCAGTGTTaGACCTTCAGCAACATCAAA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSNFFQC*TFSNIK
Trigger: TTTGATGTTGCTGAAGGTTCAACACTGGAAGAAGTT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGACAACCTCTTCCCTATaGTTCTTAATTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWTTSSL*FLIGIQ
Trigger: TTGTATGCCAATTAAGAATCATAGGGAAGAGGTTGT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGCTACTTCTCCAATATTaGGTAAATGTGTCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWLLLQY*VNVSLG
Trigger: CCCTAAAGACACATTTACTCAATATTGGAGAAGTAG...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTCTATGAACCCAACTTaGATACTTGGGATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAISMNPT*ILGILF
Trigger: AAACAAAATCCCAAGTATGCAAGTTGGGTTCATAGA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTATACTGCATACACTTTaGAGTACACGAAATATCACA +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAILHTL*STRNIT
Trigger: TGTGATATTTCGTGTACTGCAAAGTGTATGCAGTAT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTTCAGAAAAATGTACTaGACTGAAGTGACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAFRKMY*TEVTKF
Trigger: GAACTTTGTCACTTCAGTGCAGTACATTTTTCTGAA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTTCAGAAAAATGTACTaGACTGAAGTGACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIFRKMY*TEVTKF
Trigger: GAACTTTGTCACTTCAGTGCAGTACATTTTTCTGAA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGAATACCTCATACAGTTaGAAGCAGATGGCATCTATG +
Preference number: 4 (lower is better)
Translates to: RRLILISSILGSNSQQSKNTSYS*KQMASM
Trigger: CATAGATGCCATCTGCTTGCAACTGTATGAGGTATT...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGATCCTTACTGACATCTaGGATATTAAGTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWILTDI*DIKWFH
Trigger: ATGGAACCACTTAATATCCCAGATGTCAGTAAGGAT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGGAGAATCTGATTGCCTaGACTATTAAGAATCATCAG +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWENLIA*TIKNHQ
Trigger: CTGATGATTCTTAATAGTCCAGGCAATCAGATTCTC...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGATGGAAAACACATTTTaGCGAAAGGTCCTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWMENTF*RKVLEN
Trigger: ATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCAT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTGTTCTCACATTAAATTaGCAGTATCAGAAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAVLTLN*QYQKLS
Trigger: ACTTAGCTTCTGATACTGCCAATTTAATGTGAGAAC...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAACAACCTCTTCCCTATaGTTCTTAATTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSTTSSL*FLIGIQ
Trigger: TTGTATGCCAATTAAGAATCATAGGGAAGAGGTTGT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAAATCTTCATCCACTATaGAAATGGTGCATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSNLHPL*KWCISA
Trigger: TGCAGAAATGCACCATTTTCATAGTGGATGAAGATT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAAAATACAGAGTAAGGTaGAGGAGGACTGTATGTATA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSKYRVR*RRTVCI
Trigger: TATACATACAGTCCTCCTTCACCTTACTCTGTATTT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR TCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAAATGGAAAACCACCTTaGCCATCTCATGACTTTATA +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSNGKPP*PSHDFI
Trigger: TATAAAGTCATGAGATGGTCAAGGTGGTTTTCCATT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGCACTTAAAATCCATCTaGAAAGAACCTCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWHLKSI*KEPHVS
Trigger: TGAAACATGAGGTTCTTTGCAGATGGATTTTAAGTG...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGGAGAATCTGATTGCCTaGACTATTAAGAATCATCAG +
Preference number: 4 (lower is better)
Translates to: RRLILISSILGSNSQQSKENLIA*TIKNHQ
Trigger: CTGATGATTCTTAATAGTCCAGGCAATCAGATTCTC...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAATGGAAAACACATTTTaGCGAAAGGTCCTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSMENTF*RKVLEN
Trigger: ATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCAT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CCA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGGTTCTCACATTAAATTaGCAGTATCAGAAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWVLTLN*QYQKLS
Trigger: ACTTAGCTTCTGATACTGCCAATTTAATGTGAGAAC...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR GCA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATCTATGAACCCAACTTaGATACTTGGGATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSSMNPT*ILGILF
Trigger: AAACAAAATCCCAAGTATGCAAGTTGGGTTCATAGA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS GCA 90 bp TGCCGGGCGTGTGTCACCCTCCCGGCCAAGACGGCCAGCACCCGCTaGCCGACGGCCGCTGCCCAGAGCAGGCGGCAGCGGGGCACGGAC +
Preference number: 5 (lower is better)
Translates to: CRACVTLPAKTASTR*PTAAAQSRRQRGTD
Trigger: GTCCGTGCCCCGCTGCCGCCTGCTCTGGGCAGCGGCCGTCGGGCAGCGGGTGCTGGCCGTCTTGGCCGGGAGGGTGACACACGCCCGGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264805.9
CDS GCA 90 bp AGTGGGACCCGGGCGTCGAACCCGGGCGGGCTCCTCGACCATCACTaGCGGGCGTGTGTCACCCTCCCGGCCAAGACGGCCAGCACCCGC +
Preference number: 5 (lower is better)
Translates to: SGTRASNPGGLLDHH*RACVTLPAKTASTR
Trigger: GCGGGTGCTGGCCGTCTTGGCCGGGAGGGTGACACACGCCCGGCAGTGATGGTCGAGGAGCCCGCCCGGGTTCGACGCCCGGGTCCCACT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264805.9
CDS GCA 90 bp CACCCTCCCGGCCAAGACGGCCAGCACCCGCTGCCCGACGGCCGCTaGCCAGAGCAGGCGGCAGCGGGGCACGGACTCTTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: HPPGQDGQHPLPDGR*PEQAAAGHGLFLQR
Trigger: CCTTTGCAGAAAGAGTCCGTGCCCCGCTGCCGCCTGCTCTGGGCAGCGGCCGTCGGGCAGCGGGTGCTGGCCGTCTTGGCCGGGAGGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264805.9
CDS GCA 90 bp CTCTGCTGCTGCTTCTGCTGCTGGGGCTGCTGCTGCTGTCGCTGCTaGCCGAAGCTGGGGCCGGCCCGCTCCATGGTTGGCACCGCGCGC +
Preference number: 5 (lower is better)
Translates to: LCCCFCCWGCCCCRC*PKLGPARSMVGTAR
Trigger: GCGCGCGGTGCCAACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGCGACAGCAGCAGCAGCCCCAGCAGCAGAAGCAGCAGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS GCA 90 bp TCCCTCTGCTGCTGCTTCTGCTGCTGGGGCTGCTGCTGCTGTCGCTaGTGCCCGAAGCTGGGGCCGGCCCGCTCCATGGTTGGCACCGCG +
Preference number: 5 (lower is better)
Translates to: SLCCCFCCWGCCCCR*CPKLGPARSMVGTA
Trigger: CGCGGTGCCAACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGCGACAGCAGCAGCAGCCCCAGCAGCAGAAGCAGCAGCAGAGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS TCA 90 bp CCAGGAGGCTCCGTAGGGGCAACAACGCGCGCAGGTGAGGTGAGGTaGGGTCGGCGACTCAGAACCAGCTCCCTCACGGCCCCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PGGSVGATTRAGEVR*GRRLRTSSLTAPAS
Trigger: GGAGGCCGGGGCCGTGAGGGAGCTGGTTCTGAGTCGCCGACCTCACCTCACCTCACCTGCGCGCGTTGTTGCCCCTACGGAGCCTCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264805.9
CDS CCA 90 bp GCTGCTGCTGTCGCTGCTGCCCGAAGCTGGGGCCGGCCCGCTCCATaGTTGGCACCGCGCGCCTCGGAGGCTCTCTGGTACTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: AAAVAAARSWGRPAP*LAPRASEALWYCFS
Trigger: GGAAAAGCAGTACCAGAGAGCCTCCGAGGCGCGCGGTGCCAACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGCGACAGCAGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCGGCCCGCTCCATGGTaGGCACCGCGCGCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDRPAPW*APRASE
Trigger: CTCCGAGGCGCGCGGTGCCAACCATGGAGCGGGCCG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS GCA 90 bp CTGGTTGGTGTTCCAGGGGCACTGTTATCTGCACGAGGACTCTGCTaGAAGGGACAAGAGCAAGATTCGGTGTGGCCTCTGATACCTTCC +
Preference number: 5 (lower is better)
Translates to: LVGVPGALLSARGLC*KGQEQDSVWPLIPS
Trigger: GGAAGGTATCAGAGGCCACACCGAATCTTGCTCTTGTCCCTTGCAGCAGAGTCCTCGTGCAGATAACAGTGCCCCTGGAACACCAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS GCA 90 bp TTCCTGGTTGGTGTTCCAGGGGCACTGTTATCTGCACGAGGACTCTaGTGCAAGGGACAAGAGCAAGATTCGGTGTGGCCTCTGATACCT +
Preference number: 5 (lower is better)
Translates to: FLVGVPGALLSARGL*CKGQEQDSVWPLIP
Trigger: AGGTATCAGAGGCCACACCGAATCTTGCTCTTGTCCCTTGCAGCAGAGTCCTCGTGCAGATAACAGTGCCCCTGGAACACCAACCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS GCA 90 bp TCCTCGGTCAGTCCCTGGGAGCCAGTGGTTTCTTCACTCGCTACCTaGACATTCAGAGTCACCTGGGGGAGCTTGGTAGTCATACAGATT +
Preference number: 5 (lower is better)
Translates to: SSVSPWEPVVSSLAT*TFRVTWGSLVVIQI
Trigger: AATCTGTATGACTACCAAGCTCCCCCAGGTGACTCTGAATGTGCAGGTAGCGAGTGAAGAAACCACTGGCTCCCAGGGACTGACCGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS CCA 90 bp TCCTTTGTGAGAAAGAGTGTTCCTCGGTCAGTCCCTGGGAGCCAGTaGTTTCTTCACTCGCTACCTGCACATTCAGAGTCACCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: SFVRKSVPRSVPGSQ*FLHSLPAHSESPGG
Trigger: TCCCCCAGGTGACTCTGAATGTGCAGGTAGCGAGTGAAGAAACCACTGGCTCCCAGGGACTGACCGAGGAACACTCTTTCTCACAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS CCA 90 bp AGTCGGCTGGTCCTTTGTGAGAAAGAGTGTTCCTCGGTCAGTCCCTaGGAGCCAGTGGTTTCTTCACTCGCTACCTGCACATTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SRLVLCEKECSSVSP*EPVVSSLATCTFRV
Trigger: GACTCTGAATGTGCAGGTAGCGAGTGAAGAAACCACTGGCTCCCAGGGACTGACCGAGGAACACTCTTTCTCACAAAGGACCAGCCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS TCA 90 bp GAGGACTCTGCTGCAAGGGACAAGAGCAAGATTCGGTGTGGCCTCTaGTACCTTCCTTGCACACAGGGATGGTGTGAACTCTCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: EDSAARDKSKIRCGL*YLPCTQGWCELSQQ
Trigger: TTGCTGAGAGAGTTCACACCATCCCTGTGTGCAAGGAAGGTATCAGAGGCCACACCGAATCTTGCTCTTGTCCCTTGCAGCAGAGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS GCA 90 bp AGAGGCAGAGATTTTCCTGGTTGGTGTTCCAGGGGCACTGTTATCTaGACGAGGACTCTGCTGCAAGGGACAAGAGCAAGATTCGGTGTG +
Preference number: 5 (lower is better)
Translates to: RGRDFPGWCSRGTVI*TRTLLQGTRARFGV
Trigger: CACACCGAATCTTGCTCTTGTCCCTTGCAGCAGAGTCCTCGTGCAGATAACAGTGCCCCTGGAACACCAACCAGGAAAATCTCTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAGCCACTCAGTTCCGCTaGGCCTGGCCGCTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPATQFR*AWPLSP
Trigger: TGGGGAAAGCGGCCAGGCCAAGCGGAACTGAGTGGC...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATGGGACCGTGAGCTCCTaGGGGTCACTGCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDGTVSS*GSLLCL
Trigger: GAGACAGAGCAGTGACCCCAAGGAGCTCACGGTCCC...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTCCGTCATGTTGCCTTaGGGCTGTCCCGTGGACTCG +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDSVMLP*GCPVDS
Trigger: CGAGTCCACGGGACAGCCCAAAGGCAACATGACGGA...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS TCA 90 bp AGGCATATTGCAGAACACACCATCTCTGTAAACTTCAACTCTGCATaGAATAGGCCACTCAGTTCCGCTTGGCCTGGCCGCTTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: RHIAEHTISVNFNSA*NRPLSSAWPGRFPH
Trigger: ATGGGGAAAGCGGCCAGGCCAAGCGGAACTGAGTGGCCTATTTCATGCAGAGTTGAAGTTTACAGAGATGGTGTGTTCTGCAATATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTGCCACTCAGTTCCGCTaGGCCTGGCCGCTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAATQFR*AWPLSP
Trigger: TGGGGAAAGCGGCCAGGCCAAGCGGAACTGAGTGGC...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTGGGACCGTGAGCTCCTaGGGGTCACTGCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIGTVSS*GSLLCL
Trigger: GAGACAGAGCAGTGACCCCAAGGAGCTCACGGTCCC...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCTCCAATGTGACCATTaGCTTGGCCATGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDLQCDH*LGHGSL
Trigger: GAGAGAGCCATGGCCAAGCAAATGGTCACATTGGAG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCACAGGGCCTCATACAGTaGCAAGCAGATGGCATCTAT +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPQGLIQ*QADGIY
Trigger: ATAGATGCCATCTGCTTGCAACTGTATGAGGCCCTG...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTCAAGGTTCCGTCATGTaGCCTTTGGGCTGTCCCGTG +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAQGSVM*PLGCPV
Trigger: CACGGGACAGCCCAAAGGCAACATGACGGAACCTTG...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCAGAGATTTTCCTGGTaGGTGTTCCAGGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHQRFSW*VFQGHC
Trigger: ACAGTGCCCCTGGAACACCAACCAGGAAAATCTCTG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCACATCATGATCAAACCTaGGAGGGGTTAGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPHHDQT*EGLEAS
Trigger: AGATGCCTCTAACCCCTCCAAGGTTTGATCATGATG...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATCTAATTCCAAGAGTCTaGAGCACTGGTCCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDLIPRV*STGPLH
Trigger: ATGAAGGGGACCAGTGCTCAAGACTCTTGGAATTAG...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTTTCCTGATTTCTTGTaGATGGCCTGGGCTACACCA +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDFPDFL*MAWATP
Trigger: TGGTGTAGCCCAGGCCATCAACAAGAAATCAGGAAA...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATCAGCAAACCATGCATaGACCATTTCTCTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPSANHA*TISLVA
Trigger: AGCCACCAGAGAAATGGTCAATGCATGGTTTGCTGA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAAAGGTTTCACCTGCTTaGCATCAGGTAGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPKVSPA*HQVGEM
Trigger: CATCTCACCTACCTGATGCAAAGCAGGTGAAACCTT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS TCA 90 bp AGCAAAGTCCTTTTCATCTTTTTCAGTAAATGTCCCACCGTTTCCTaGTTTCTTGTTGATGGCCTGGGCTACACCAACAACCTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SKVLFIFFSKCPTVS*FLVDGLGYTNNLFP
Trigger: AGGGAAGAGGTTGTTGGTGTAGCCCAGGCCATCAACAAGAAATCAGGAAACGGTGGGACATTTACTGAAAAAGATGAAAAGGACTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
CDS GCA 90 bp GTTCTGCACAAGGTTGAGGTCAGTAAACATCCGAATTGTACACAGTaGTGTTTCCAGATCAGACAGCTCAAAGTCACTGAAGCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: VLHKVEVSKHPNCTQ*CFQIRQLKVTEAKV
Trigger: GACTTTAGCTTCAGTGACTTTGAGCTGTCTGATCTGGAAACAGCACTGTGTACAATTCGGATGTTTACTGACCTCAACCTTGTGCAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000512450.5
ENST00000512739.5
ENST00000513594.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCAGAGATTTTCCTGGTaGGTGTTCCAGGGGCACTGT +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIQRFSW*VFQGHC
Trigger: ACAGTGCCCCTGGAACACCAACCAGGAAAATCTCTG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCCGTTTCCTGATTTCTaGTTGATGGCCTGGGCTACA +
Preference number: 5 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHPFPDF*LMAWAT
Trigger: TGTAGCCCAGGCCATCAACAAGAAATCAGGAAACGG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATAAGTTCTGCACAAGGTaGAGGTCAGTAAACATCCGA +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDKFCTR*RSVNIR
Trigger: TCGGATGTTTACTGACCTCAACCTTGTGCAGAACTT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTTCTGCTATCCGTTGTaGAATAGGCCAGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDFCYPL*NRPGFC
Trigger: ACAAAACCCTGGCCTATTCAACAACGGATAGCAGAA...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAAAGTTCTGCTATCCGTaGTTGAATAGGCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPKFCYP*LNRPGF
Trigger: AAACCCTGGCCTATTCAACAACGGATAGCAGAACTT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTTTGGCGAAAGGTCCTaGAGAATGCTGGATTACCAT +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDFGERS*RMLDYH
Trigger: ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAA...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAATGTGACCATTTGCTaGGCCATGGCTCTCTCCACT +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAINVTIC*AMALST
Trigger: AGTGGAGAGAGCCATGGCCAAGCAAATGGTCACATT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTAATGTGACCATTTGCTaGGCCATGGCTCTCTCCACT +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEANVTIC*AMALST
Trigger: AGTGGAGAGAGCCATGGCCAAGCAAATGGTCACATT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGCTCCAATGTGACCATTaGCTTGGCCATGGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWLQCDH*LGHGSL
Trigger: GAGAGAGCCATGGCCAAGCAAATGGTCACATTGGAG...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCAGGGCCTCATACAGTaGCAAGCAGATGGCATCTAT +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIQGLIQ*QADGIY
Trigger: ATAGATGCCATCTGCTTGCAACTGTATGAGGCCCTG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS TCA 90 bp ACTAGCAAGGTCAAGCAGCACCTGATTTCTCTTGTTCTCCAGCAGTaGAGTCTCATAGAGCTGAGCATTATGAAGAACAATACCACAAAA +
Preference number: 5 (lower is better)
Translates to: TSKVKQHLISLVLQQ*SLIELSIMKNNTTK
Trigger: TTTTGTGGTATTGTTCTTCATAATGCTCAGCTCTATGAGACTTCACTGCTGGAGAACAAGAGAAATCAGGTGCTGCTTGACCTTGCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
CDS TCA 90 bp ATTAAGAATCATCAGGCACTGGTCAAAATGATGGTGTTCCATGATTaGATGGCAGTAAAGCTGGGCAAGTGGATGTTCACTTCGCTGTAT +
Preference number: 5 (lower is better)
Translates to: IKNHQALVKMMVFHD*MAVKLGKWMFTSLY
Trigger: ATACAGCGAAGTGAACATCCACTTGCCCAGCTTTACTGCCATTCAATCATGGAACACCATCATTTTGACCAGTGCCTGATGATTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000503412.1
ENST00000509612.1
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCTAATTCCAAGAGTCTaGAGCACTGGTCCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAILIPRV*STGPLH
Trigger: ATGAAGGGGACCAGTGCTCAAGACTCTTGGAATTAG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAAAACTTCTTCCAGTGTaGAACCTTCAGCAACATCAA +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPKLLPV*NLQQHQ
Trigger: TTGATGTTGCTGAAGGTTCAACACTGGAAGAAGTTT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATAAACTTCTTCCAGTGTaGAACCTTCAGCAACATCAA +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDKLLPV*NLQQHQ
Trigger: TTGATGTTGCTGAAGGTTCAACACTGGAAGAAGTTT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAAGCGGATACAGTTATTaGAAACTTCTTCCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPSGYSY*KLLPVL
Trigger: CAACACTGGAAGAAGTTTCAAATAACTGTATCCGCT...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTCCTCATATGCATCTTaGATGTTCAAGGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHSSYAS*MFKGSP
Trigger: TGGTGAGCCCTTGAACATCAAAGATGCATATGAGGA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTTTCCTGATTTCTTGTaGATGGCCTGGGCTACACCA +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIFPDFL*MAWATP
Trigger: TGGTGTAGCCCAGGCCATCAACAAGAAATCAGGAAA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGCCGTTTCCTGATTTCTaGTTGATGGCCTGGGCTACA +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWPFPDF*LMAWAT
Trigger: TGTAGCCCAGGCCATCAACAAGAAATCAGGAAACGG...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTTGAAAGGCTTAACCTaGCCAGTATTCTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHLKGLT*PVFSSI
Trigger: GATGGAGGAGAATACTGGCAAGGTTAAGCCTTTCAA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATAAGTTCTGCACAAGGTaGAGGTCAGTAAACATCCGA +
Preference number: 5 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHKFCTR*RSVNIR
Trigger: TCGGATGTTTACTGACCTCAACCTTGTGCAGAACTT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TCGGGACATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATAAGCTGTCATCAGCATaGCCAAAAACAACTCCTTTT +
Preference number: 5 (lower is better)
Translates to: SGHRWKTHFGERSLRMLDKLSSA*PKTTPF
Trigger: AAAAGGAGTTGTTTTTGGCAATGCTGATGACAGCTT...ATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATGTCCCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CTTCTTAGCATCCCCAAATCAATTTGTTGGAGATTAGCACATAGTAGGCACTCATTCTGCTATCCGTTGTaGAATAGGCCAGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: LLSIPKSICWRLAHSRHSFCYPL*NRPGFC
Trigger: ACAAAACCCTGGCCTATTCAACAACGGATAGCAGAA...TGAGTGCCTACTATGTGCTAATCTCCAACAAATTGATTTGGGGATGCTAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CAA 90 bp CTTCTTAGCATCCCCAAATCAATTTGTTGGAGATTAGCACATAGTAGGCACTCAAAGTTCTGCTATCCGTaGTTGAATAGGCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: LLSIPKSICWRLAHSRHSKFCYP*LNRPGF
Trigger: AAACCCTGGCCTATTCAACAACGGATAGCAGAACTT...TGAGTGCCTACTATGTGCTAATCTCCAACAAATTGATTTGGGGATGCTAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCATTTTTGACCCTAGTATaGGCAATAGCCCTTTGCTAT +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPFLTLV*AIALCY
Trigger: ATAGCAAAGGGCTATTGCCAATACTAGGGTCAAAAA...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS GCA 90 bp TACAAGTTCTGCTATCCGTTGTTGAATAGGCCAGGGTTTTGTAATTaGAGAAAGATCACAAGCTGTCATCAGCATTGCCAAAAACAACTC +
Preference number: 5 (lower is better)
Translates to: YKFCYPLLNRPGFCN*RKITSCHQHCQKQL
Trigger: GAGTTGTTTTTGGCAATGCTGATGACAGCTTGTGATCTTTCTGCAATTACAAAACCCTGGCCTATTCAACAACGGATAGCAGAACTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000503412.1
ENST00000512494.1
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTGTCCCACAATGCCTTaGTTCCATTCTAAGCGGATA +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAICPTMP*FHSKRI
Trigger: TATCCGCTTAGAATGGAACAAAGGCATTGTGGGACA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTGGTCAACTTCTGCATaGAACCGAGGATCCTCATAT +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAWSTSA*NRGSSY
Trigger: ATATGAGGATCCTCGGTTCAATGCAGAAGTTGACCA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTTGAAAGGCTTAACCTaGCCAGTATTCTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEALKGLT*PVFSSI
Trigger: GATGGAGGAGAATACTGGCAAGGTTAAGCCTTTCAA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTGTTCGTCATTTCGGTaGAAAGGCTTAACCTTGCCA +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEACSSFR*KGLTLP
Trigger: TGGCAAGGTTAAGCCTTTCAACCGAAATGACGAACA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GGGTTGGAGGTAGAAGTTAACAAATCAAGCAAATCTCTCCTTCTACTCTCCCCAGCTAAAATAGCTTGCTaGATTATTTTCAACGTGGTC +
Preference number: 5 (lower is better)
Translates to: GLEVEVNKSSKSLLLLSPAKIAC*IIFNVV
Trigger: GACCACGTTGAAAATAATCAAGCAAGCTATTTTAGC...TGGGGAGAGTAGAAGGAGAGATTTGCTTGATTTGTTAACTTCTACCTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTTCTGCTATCCGTTGTaGAATAGGCCAGGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIFCYPL*NRPGFC
Trigger: ACAAAACCCTGGCCTATTCAACAACGGATAGCAGAA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTAAGTTCTGCTATCCGTaGTTGAATAGGCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAKFCYP*LNRPGF
Trigger: AAACCCTGGCCTATTCAACAACGGATAGCAGAACTT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGGTTCCCTCAGAATCCTaGACAACAATGGGTCTAAGA +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWVPSES*TTMGLR
Trigger: TCTTAGACCCATTGTTGTCAAGGATTCTGAGGGAAC...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTCCTCATATGCATCTTaGATGTTCAAGGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWSSYAS*MFKGSP
Trigger: TGGTGAGCCCTTGAACATCAAAGATGCATATGAGGA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTGGTCAACTTCTGCATaGAACCGAGGATCCTCATAT +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWWSTSA*NRGSSY
Trigger: ATATGAGGATCCTCGGTTCAATGCAGAAGTTGACCA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CTTCTTAGCATCCCCAAATCAATTTGTTGGAGATTAGCACATAGTAGGCACTCAAAGCTGTCATCAGCATaGCCAAAAACAACTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LLSIPKSICWRLAHSRHSKLSSA*PKTTPF
Trigger: AAAAGGAGTTGTTTTTGGCAATGCTGATGACAGCTT...TGAGTGCCTACTATGTGCTAATCTCCAACAAATTGATTTGGGGATGCTAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTAAGAAACTAGGCATATaGCAGAACACACCATCTCTG +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIKKLGI*QNTPSL
Trigger: CAGAGATGGTGTGTTCTGCAATATGCCTAGTTTCTT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTTGAAGACAAAGGCTTaGCCCAAACATAACTCCTTT +
Preference number: 5 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHLKTKA*PKHNSF
Trigger: AAAGGAGTTATGTTTGGGCAAAGCCTTTGTCTTCAA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAGTTCCCTCAGAATCCTaGACAACAATGGGTCTAAGA +
Preference number: 5 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSVPSES*TTMGLR
Trigger: TCTTAGACCCATTGTTGTCAAGGATTCTGAGGGAAC...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATGTCCCACAATGCCTTaGTTCCATTCTAAGCGGATA +
Preference number: 5 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSCPTMP*FHSKRI
Trigger: TATCCGCTTAGAATGGAACAAAGGCATTGTGGGACA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCTTGTAGCCTGTAATTaGGTCAACTTCTGCATTGAA +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAILVACN*VNFCIE
Trigger: TTCAATGCAGAAGTTGACCAAATTACAGGCTACAAG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATCATACAAAGAATGCTTaGTGTCTTGTAGCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHHTKNA*CLVACN
Trigger: ATTACAGGCTACAAGACACAAAGCATTCTTTGTATG...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATGTTCGTCATTTCGGTaGAAAGGCTTAACCTTGCCA +
Preference number: 5 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSCSSFR*KGLTLP
Trigger: TGGCAAGGTTAAGCCTTTCAACCGAAATGACGAACA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTAAGCTGTCATCAGCATaGCCAAAAACAACTCCTTTT +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAKLSSA*PKTTPF
Trigger: AAAAGGAGTTGTTTTTGGCAATGCTGATGACAGCTT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATATCTATGAACCCAACTaGCATACTTGGGATTTTGTT +
Preference number: 5 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHIYEPN*HTWDFV
Trigger: AACAAAATCCCAAGTATGCAAGTTGGGTTCATAGAT...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CTTCTTAGCATCCCCAAATCAATTTGTTGGAGATTAGCACATAGTAGGCACTCAATCTATGAACCCAACTaGCATACTTGGGATTTTGTT +
Preference number: 5 (lower is better)
Translates to: LLSIPKSICWRLAHSRHSIYEPN*HTWDFV
Trigger: AACAAAATCCCAAGTATGCAAGTTGGGTTCATAGAT...TGAGTGCCTACTATGTGCTAATCTCCAACAAATTGATTTGGGGATGCTAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGAAGAAACTAGGCATATaGCAGAACACACCATCTCTG +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWKKLGI*QNTPSL
Trigger: CAGAGATGGTGTGTTCTGCAATATGCCTAGTTTCTT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTTCTCTGGATCTCAGTaGACTTGTCCTATACATCAA +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAFSGSQ*TCPIHQ
Trigger: TTGATGTATAGGACAAGTCAACTGAGATCCAGAGAA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTTTGAAGACAAAGGCTTaGCCCAAACATAACTCCTTT +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAILKTKA*PKHNSF
Trigger: AAAGGAGTTATGTTTGGGCAAAGCCTTTGTCTTCAA...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTATCATCATCCTGGGTTaGTACCTTGAAGCAATATAC +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEAIIILG*YLEAIY
Trigger: GTATATTGCTTCAAGGTACAAACCCAGGATGATGAT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CATAGATGGAAAACACATTTTGGCGAAAGGTCCTTGAGAATGCTGGATTACCATTTGTGCCACCTTATTTaGACTACAGTTGTTCATAAG +
Preference number: 5 (lower is better)
Translates to: HRWKTHFGERSLRMLDYHLCHLI*TTVVHK
Trigger: CTTATGAACAACTGTAGTCAAAATAAGGTGGCACAA...ATGGTAATCCAGCATTCTCAAGGACCTTTCGCCAAAATGTGTTTTCCATCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CTTCTTAGCATCCCCAAATCAATTTGTTGGAGATTAGCACATAGTAGGCACTCAATAGTATATACAGTATaGCTCCTTGAGGGTAACACT +
Preference number: 5 (lower is better)
Translates to: LLSIPKSICWRLAHSRHSIVYTV*LLEGNT
Trigger: AGTGTTACCCTCAAGGAGCAATACTGTATATACTAT...TGAGTGCCTACTATGTGCTAATCTCCAACAAATTGATTTGGGGATGCTAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS TCA 90 bp TTAACAAGTTGGCAAACCCAAAATAGAATGCAGAAAGGAGGCAACTaGCATAAGCAGTCTCAAATTTCAAATCTACACCTCTGTATCCAA +
Preference number: 5 (lower is better)
Translates to: LTSWQTQNRMQKGGN*HKQSQISNLHLCIQ
Trigger: TTGGATACAGAGGTGTAGATTTGAAATTTGAGACTGCTTATGTCAGTTGCCTCCTTTCTGCATTCTATTTTGGGTTTGCCAACTTGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512739.5
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGAGCGGATACAGTTATTaGAAACTTCTTCCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWSGYSY*KLLPVL
Trigger: CAACACTGGAAGAAGTTTCAAATAACTGTATCCGCT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTCATACAAAGAATGCTTaGTGTCTTGTAGCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIHTKNA*CLVACN
Trigger: ATTACAGGCTACAAGACACAAAGCATTCTTTGTATG...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGGGTGCATTTCTGCACTaGCATGAAAGAGATAATAGT +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWGAFLH*HERDNS
Trigger: ACTATTATCTCTTTCATGCAAGTGCAGAAATGCACC...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTGCTAAAATAGCTTGCTaGATTATTTTCAACGTGGTC +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIAKIAC*IIFNVV
Trigger: GACCACGTTGAAAATAATCAAGCAAGCTATTTTAGC...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp CCAGGATTCTCTGGATCTCAGTTGACTTGTCCTATACATCAAAATATGGCAATTATCTATGAACCCAACTaGCATACTTGGGATTTTGTT +
Preference number: 5 (lower is better)
Translates to: PGFSGSQLTCPIHQNMAIIYEPN*HTWDFV
Trigger: AACAAAATCCCAAGTATGCAAGTTGGGTTCATAGAT...AATTGCCATATTTTGATGTATAGGACAAGTCAACTGAGATCCAGAGAATCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTAATACTGCATACACTTaGCAGTACACGAAATATCAC +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEANTAYT*QYTKYH
Trigger: GTGATATTTCGTGTACTGCAAAGTGTATGCAGTATT...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp GAAATGATGCAGTATACCCCATGTTCTCACATTAAATTGGCAGTATCAGAAGCTTTGTGCCACCTTATTTaGACTACAGTTGTTCATAAG +
Preference number: 5 (lower is better)
Translates to: EMMQYTPCSHIKLAVSEALCHLI*TTVVHK
Trigger: CTTATGAACAACTGTAGTCAAAATAAGGTGGCACAA...AGCTTCTGATACTGCCAATTTAATGTGAGAACATGGGGTATACTGCATCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATCAGCAAACCATGCATaGACCATTTCTTTTGGCAAG +
Preference number: 5 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSSANHA*TISFGK
Trigger: CTTGCCAAAAGAAATGGTCAATGCATGGTTTGCTGA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS GCA 90 bp AAAGAATCGGAGCAATCTTCATCCACTATGAAAATGGTGCATTTCTaGACTTGCATGAAAGAGATAATAGTGGCAGCTATTTTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: KESEQSSSTMKMVHF*TCMKEIIVAAIFFK
Trigger: TTTGAAGAAAATAGCTGCCACTATTATCTCTTTCATGCAAGTGCAGAAATGCACCATTTTCATAGTGGATGAAGATTGCTCCGATTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000508914.1
CDS GCA 90 bp AAGTTTAGCAAGTCTAGTAGTTTTCATATAAATACCTCATACAGTTaGAAGCAGATGGCATCTATGAACCCAACTTGCATACTTGGGATT +
Preference number: 5 (lower is better)
Translates to: KFSKSSSFHINTSYS*KQMASMNPTCILGI
Trigger: AATCCCAAGTATGCAAGTTGGGTTCATAGATGCCATCTGCTTGCAACTGTATGAGGTATTTATATGAAAACTACTAGACTTGCTAAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCACTTGTAGCCTGTAATTaGGTCAACTTCTGCATTGAA +
Preference number: 5 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSLVACN*VNFCIE
Trigger: TTCAATGCAGAAGTTGACCAAATTACAGGCTACAAG...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAGGTGCATTTCTGCACTaGCATGAAAGAGATAATAGT +
Preference number: 5 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSGAFLH*HERDNS
Trigger: ACTATTATCTCTTTCATGCAAGTGCAGAAATGCACC...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGAATACTGCATACACTTaGCAGTACACGAAATATCAC +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWNTAYT*QYTKYH
Trigger: GTGATATTTCGTGTACTGCAAAGTGTATGCAGTATT...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAATCATCATCCTGGGTTaGTACCTTGAAGCAATATAC +
Preference number: 5 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSIIILG*YLEAIY
Trigger: GTATATTGCTTCAAGGTACAAACCCAGGATGATGAT...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp AAACAAAAGACAATTGCTTGTGATGGCCTGTTAAGTTTTAGGAGTACAATCTGGTGTTCTCACATTAAATaGGCAGTATCAGAAGCTAAG +
Preference number: 5 (lower is better)
Translates to: KQKTIACDGLLSFRSTIWCSHIK*AVSEAK
Trigger: CTTAGCTTCTGATACTGCCAATTTAATGTGAGAACA...CCAGATTGTACTCCTAAAACTTAACAGGCCATCACAAGCAATTGTCTTTTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGAAATACCTCATACAGTaGCAAGCAGATGGCATCTAT +
Preference number: 5 (lower is better)
Translates to: RRLILISSILGSNSQQSKKYLIQ*QADGIY
Trigger: ATAGATGCCATCTGCTTGCAACTGTATGAGGTATTT...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS TCA 90 bp CTTGTTAATGTATCAGATGATTTTTCTAATTCCTCACACTCCATGTaGAACACACTAGAAAAAGAATCGGAGCAATCTTCATCCACTATG +
Preference number: 5 (lower is better)
Translates to: LVNVSDDFSNSSHSM*NTLEKESEQSSSTM
Trigger: CATAGTGGATGAAGATTGCTCCGATTCTTTTTCTAGTGTGTTTCACATGGAGTGTGAGGAATTAGAAAAATCATCTGATACATTAACAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000508914.1
CDS-3UTR CAA 90 bp AGGCGCCTAATATTAATCTCTTCAATTTTAGGTTCTAATTCACAACAGTCCAAGGCTAAAATAGCTTGCTaGATTATTTTCAACGTGGTC +
Preference number: 5 (lower is better)
Translates to: RRLILISSILGSNSQQSKAKIAC*IIFNVV
Trigger: GACCACGTTGAAAATAATCAAGCAAGCTATTTTAGC...CTTGGACTGTTGTGAATTAGAACCTAAAATTGAAGAGATTAATATTAGGCGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503412.1
CDS-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCAGCTCCTAACCTACTTTaGAAAAAGGAAAGATTCCAA +
Preference number: 5 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSAPNLL*KKERFQ
Trigger: TTGGAATCTTTCCTTTTTCAAAAGTAGGTTAGGAGC...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS-3UTR CAA 90 bp TGTACTCTCTTATCTATAACCATGTCTCACTTCAAGTCAATGCTACAATTGTCATGTTCTCACATTAAATaGGCAGTATCAGAAGCTAAG +
Preference number: 5 (lower is better)
Translates to: CTLLSITMSHFKSMLQLSCSHIK*AVSEAK
Trigger: CTTAGCTTCTGATACTGCCAATTTAATGTGAGAACA...TGACAATTGTAGCATTGACTTGAAGTGAGACATGGTTATAGATAAGAGAGTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354960.8
ENST00000394439.5
CDS GCA 72 bp TGTGTCACCCTCCCGGCCAAGACGGCCAGCACCCGCTaGCCGACGGCCGCTGCCCAGAGCAGGCGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: CVTLPAKTASTR*PTAAAQSRRQR
Trigger: CCGCTGCCGCCTGCTCTGGGCAGCGGCCGTCGGGCAGCGGGTGCTGGCCGTCTTGGCCGGGAGGGTGACACA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264805.9
CDS CCA 72 bp GCTGGGGCTGCTGCTGCTGTCGCTGCTGCCCGAAGCTaGGGCCGGCCCGCTCCATGGTTGGCACCGCGCGCC +
Preference number: 6 (lower is better)
Translates to: AGAAAAVAAARS*GRPAPWLAPRA
Trigger: GGCGCGCGGTGCCAACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGCGACAGCAGCAGCAGCCCCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS GCA 72 bp GGCCAAGACGGCCAGCACCCGCTGCCCGACGGCCGCTaGCCAGAGCAGGCGGCAGCGGGGCACGGACTCTTT +
Preference number: 6 (lower is better)
Translates to: GQDGQHPLPDGR*PEQAAAGHGLF
Trigger: AAAGAGTCCGTGCCCCGCTGCCGCCTGCTCTGGGCAGCGGCCGTCGGGCAGCGGGTGCTGGCCGTCTTGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264805.9
CDS GCA 72 bp CGGGCGTCGAACCCGGGCGGGCTCCTCGACCATCACTaGCGGGCGTGTGTCACCCTCCCGGCCAAGACGGCC +
Preference number: 6 (lower is better)
Translates to: RASNPGGLLDHH*RACVTLPAKTA
Trigger: GGCCGTCTTGGCCGGGAGGGTGACACACGCCCGGCAGTGATGGTCGAGGAGCCCGCCCGGGTTCGACGCCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264805.9
CDS CCA 72 bp GTCGCTGCTGCCCGAAGCTGGGGCCGGCCCGCTCCATaGTTGGCACCGCGCGCCTCGGAGGCTCTCTGGTAC +
Preference number: 6 (lower is better)
Translates to: VAAARSWGRPAP*LAPRASEALWY
Trigger: GTACCAGAGAGCCTCCGAGGCGCGCGGTGCCAACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS CAA 72 bp GCTGCTGCCCGAAGCTGGGGCCGGCCCGCTCCATGGTaGGCACCGCGCGCCTCGGAGGCTCTCTGGTACTGC +
Preference number: 6 (lower is better)
Translates to: AAARSWGRPAPW*APRASEALWYC
Trigger: GCAGTACCAGAGAGCCTCCGAGGCGCGCGGTGCCAACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS GCA 72 bp TCCCTCTGCTGCTGCTTCTGCTGCTGGGGCTGCTGCTaGTGTCGCTGCTGCCCGAAGCTGGGGCCGGCCCGC +
Preference number: 6 (lower is better)
Translates to: SLCCCFCCWGCC*CRCCPKLGPAR
Trigger: GCGGGCCGGCCCCAGCTTCGGGCAGCAGCGACAGCAGCAGCAGCCCCAGCAGCAGAAGCAGCAGCAGAGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS CCA 72 bp CTGCTGCCCGAAGCTGGGGCCGGCCCGCTCCATGGTTaGCACCGCGCGCCTCGGAGGCTCTCTGGTACTGCT +
Preference number: 6 (lower is better)
Translates to: LLPEAGAGPLHG*HRAPRRLSGTA
Trigger: AGCAGTACCAGAGAGCCTCCGAGGCGCGCGGTGCCAACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS GCA 72 bp TGCTTCTGCTGCTGGGGCTGCTGCTGCTGTCGCTGCTaGCCGAAGCTGGGGCCGGCCCGCTCCATGGTTGGC +
Preference number: 6 (lower is better)
Translates to: CFCCWGCCCCRC*PKLGPARSMVG
Trigger: GCCAACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGCGACAGCAGCAGCAGCCCCAGCAGCAGAAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS CAA 90 bp GCTGCTGTCGCTGCTGCCCGAAGCTGGGGCCGGCCCGCTCCATGGTaGGCACCGCGCGCCTCGGAGGCTCTCTGGTACTGCTTTTCCACC +
Preference number: 6 (lower is better)
Translates to: AAVAAARSWGRPAPW*APRASEALWYCFST
Trigger: GGTGGAAAAGCAGTACCAGAGAGCCTCCGAGGCGCGCGGTGCCAACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGCGACAGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS GCA 72 bp TGCTGCTTCTGCTGCTGGGGCTGCTGCTGCTGTCGCTaGTGCCCGAAGCTGGGGCCGGCCCGCTCCATGGTT +
Preference number: 6 (lower is better)
Translates to: CCFCCWGCCCCR*CPKLGPARSMV
Trigger: AACCATGGAGCGGGCCGGCCCCAGCTTCGGGCAGCAGCGACAGCAGCAGCAGCCCCAGCAGCAGAAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354960.8
CDS TCA 72 bp TCCGTAGGGGCAACAACGCGCGCAGGTGAGGTGAGGTaGGGTCGGCGACTCAGAACCAGCTCCCTCACGGCC +
Preference number: 6 (lower is better)
Translates to: SVGATTRAGEVR*GRRLRTSSLTA
Trigger: GGCCGTGAGGGAGCTGGTTCTGAGTCGCCGACCTCACCTCACCTCACCTGCGCGCGTTGTTGCCCCTACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264805.9
CDS CCA 72 bp GGCAAGGTTCCGTCATGTTGCCTTTGGGCTGTCCCGTaGACTCGTCCCTCACCCCAGCTTCCCCGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GKVPSCCLWAVP*TRPSPQLPRPA
Trigger: GGCTGGGCGGGGAAGCTGGGGTGAGGGACGAGTCCACGGGACAGCCCAAAGGCAACATGACGGAACCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394439.5
CDS TCA 72 bp TCCAGGAGGCTCCGTAGGGGCAACAACGCGCGCAGGTaGGGTGAGGTGAGGTCGGCGACTCAGAACCAGCTC +
Preference number: 6 (lower is better)
Translates to: SRRLRRGNNARR*GEVRSATQNQL
Trigger: GAGCTGGTTCTGAGTCGCCGACCTCACCTCACCTCACCTGCGCGCGTTGTTGCCCCTACGGAGCCTCCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264805.9
CDS TCA 72 bp TACGACAGAACCCTGTTGGAGTCGGCTGGTCCTTTGTaGGAAAGAGTGTTCCTCGGTCAGTCCCTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: YDRTLLESAGPL*ERVFLGQSLGA
Trigger: GGCTCCCAGGGACTGACCGAGGAACACTCTTTCTCACAAAGGACCAGCCGACTCCAACAGGGTTCTGTCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS GCA 72 bp GTTCCAGGGGCACTGTTATCTGCACGAGGACTCTGCTaGAAGGGACAAGAGCAAGATTCGGTGTGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: VPGALLSARGLC*KGQEQDSVWPL
Trigger: CAGAGGCCACACCGAATCTTGCTCTTGTCCCTTGCAGCAGAGTCCTCGTGCAGATAACAGTGCCCCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS GCA 72 bp GGTGTTCCAGGGGCACTGTTATCTGCACGAGGACTCTaGTGCAAGGGACAAGAGCAAGATTCGGTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: GVPGALLSARGL*CKGQEQDSVWP
Trigger: AGGCCACACCGAATCTTGCTCTTGTCCCTTGCAGCAGAGTCCTCGTGCAGATAACAGTGCCCCTGGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS GCA 72 bp AGTCCCTGGGAGCCAGTGGTTTCTTCACTCGCTACCTaGACATTCAGAGTCACCTGGGGGAGCTTGGTAGTC +
Preference number: 6 (lower is better)
Translates to: SPWEPVVSSLAT*TFRVTWGSLVV
Trigger: GACTACCAAGCTCCCCCAGGTGACTCTGAATGTGCAGGTAGCGAGTGAAGAAACCACTGGCTCCCAGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS CAA 72 bp GACCATTTCTTTTGGCAAGGTTCCGTCATGTTGCCTTaGGGCTGTCCCGTGGACTCGTCCCTCACCCCAGCT +
Preference number: 6 (lower is better)
Translates to: DHFFWQGSVMLP*GCPVDSSLTPA
Trigger: AGCTGGGGTGAGGGACGAGTCCACGGGACAGCCCAAAGGCAACATGACGGAACCTTGCCAAAAGAAATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394439.5
ENST00000420633.1
CDS GCA 72 bp GCCTGGCCGCTTTCCCCATTAATCAGCATCTTCTCCTaGTGTTCTGCAAGGGCCTGCCATTTCTGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: AWPLSPLISIFS*CSARACHFCLF
Trigger: GAACAGGCAGAAATGGCAGGCCCTTGCAGAACAGCAGGAGAAGATGCTGATTAATGGGGAAAGCGGCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
CDS CCA 72 bp ACCATTTCTTTTGGCAAGGTTCCGTCATGTTGCCTTTaGGCTGTCCCGTGGACTCGTCCCTCACCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: TISFGKVPSCCL*AVPWTRPSPQL
Trigger: AAGCTGGGGTGAGGGACGAGTCCACGGGACAGCCCAAAGGCAACATGACGGAACCTTGCCAAAAGAAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394439.5
ENST00000420633.1
CDS TCA 72 bp GCTGCAAGGGACAAGAGCAAGATTCGGTGTGGCCTCTaGTACCTTCCTTGCACACAGGGATGGTGTGAACTC +
Preference number: 6 (lower is better)
Translates to: AARDKSKIRCGL*YLPCTQGWCEL
Trigger: GAGTTCACACCATCCCTGTGTGCAAGGAAGGTATCAGAGGCCACACCGAATCTTGCTCTTGTCCCTTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS CCA 72 bp GTCCTTTGTGAGAAAGAGTGTTCCTCGGTCAGTCCCTaGGAGCCAGTGGTTTCTTCACTCGCTACCTGCACA +
Preference number: 6 (lower is better)
Translates to: VLCEKECSSVSP*EPVVSSLATCT
Trigger: TGTGCAGGTAGCGAGTGAAGAAACCACTGGCTCCCAGGGACTGACCGAGGAACACTCTTTCTCACAAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS CAA 72 bp GAGGCCGGTCAAATTCAGAGGCAGAGATTTTCCTGGTaGGTGTTCCAGGGGCACTGTTATCTGCACGAGGAC +
Preference number: 6 (lower is better)
Translates to: EAGQIQRQRFSW*VFQGHCYLHED
Trigger: GTCCTCGTGCAGATAACAGTGCCCCTGGAACACCAACCAGGAAAATCTCTGCCTCTGAATTTGACCGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS GCA 72 bp GATTTTCCTGGTTGGTGTTCCAGGGGCACTGTTATCTaGACGAGGACTCTGCTGCAAGGGACAAGAGCAAGA +
Preference number: 6 (lower is better)
Translates to: DFPGWCSRGTVI*TRTLLQGTRAR
Trigger: TCTTGCTCTTGTCCCTTGCAGCAGAGTCCTCGTGCAGATAACAGTGCCCCTGGAACACCAACCAGGAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS CCA 72 bp AGGCCGGTCAAATTCAGAGGCAGAGATTTTCCTGGTTaGTGTTCCAGGGGCACTGTTATCTGCACGAGGACT +
Preference number: 6 (lower is better)
Translates to: RPVKFRGRDFPG*CSRGTVICTRT
Trigger: AGTCCTCGTGCAGATAACAGTGCCCCTGGAACACCAACCAGGAAAATCTCTGCCTCTGAATTTGACCGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS CAA 72 bp CTCGCTACCTGCACATTCAGAGTCACCTGGGGGAGCTaGGTAGTCATACAGATTCCCAGCTTCTACCCAAGA +
Preference number: 6 (lower is better)
Translates to: LATCTFRVTWGS*VVIQIPSFYPR
Trigger: TCTTGGGTAGAAGCTGGGAATCTGTATGACTACCAAGCTCCCCCAGGTGACTCTGAATGTGCAGGTAGCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS CAA 90 bp GTTTCTTCACTCGCTACCTGCACATTCAGAGTCACCTGGGGGAGCTaGGTAGTCATACAGATTCCCAGCTTCTACCCAAGACTTGCTGAA +
Preference number: 6 (lower is better)
Translates to: VSSLATCTFRVTWGS*VVIQIPSFYPRLAE
Trigger: TTCAGCAAGTCTTGGGTAGAAGCTGGGAATCTGTATGACTACCAAGCTCCCCCAGGTGACTCTGAATGTGCAGGTAGCGAGTGAAGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS GCA 72 bp TCAAGGGCTCACCAAGCGCTGCCACATGTCCCACAATaGCTTTGTTCCATTCTAAGCGGATACAGTTATTTG +
Preference number: 6 (lower is better)
Translates to: SRAHQALPHVPQ*LCSILSGYSYL
Trigger: CAAATAACTGTATCCGCTTAGAATGGAACAAAGGCATTGTGGGACATGTGGCAGCGCTTGGTGAGCCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS TCA 72 bp CATCAGGCACTGGTCAAAATGATGGTGTTCCATGATTaGATGGCAGTAAAGCTGGGCAAGTGGATGTTCACT +
Preference number: 6 (lower is better)
Translates to: HQALVKMMVFHD*MAVKLGKWMFT
Trigger: AGTGAACATCCACTTGCCCAGCTTTACTGCCATTCAATCATGGAACACCATCATTTTGACCAGTGCCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000503412.1
ENST00000509612.1
CDS CAA 72 bp TTTTCAGTAAATGTCCCACCGTTTCCTGATTTCTTGTaGATGGCCTGGGCTACACCAACAACCTCTTCCCTA +
Preference number: 6 (lower is better)
Translates to: FSVNVPPFPDFL*MAWATPTTSSL
Trigger: TAGGGAAGAGGTTGTTGGTGTAGCCCAGGCCATCAACAAGAAATCAGGAAACGGTGGGACATTTACTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
CDS CAA 72 bp TCTTTTTCAGTAAATGTCCCACCGTTTCCTGATTTCTaGTTGATGGCCTGGGCTACACCAACAACCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SFSVNVPPFPDF*LMAWATPTTSS
Trigger: GGAAGAGGTTGTTGGTGTAGCCCAGGCCATCAACAAGAAATCAGGAAACGGTGGGACATTTACTGAAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
CDS TCA 72 bp TCAGGGCCTCATACAGTTGCAAGCAGATGGCATCTATaGACCCAACTTGCATACTTGGGATTTTGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: SGPHTVASRWHL*TQLAYLGFCFS
Trigger: AGAAAAACAAAATCCCAAGTATGCAAGTTGGGTTCATAGATGCCATCTGCTTGCAACTGTATGAGGCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
CDS CAA 72 bp ATGACAAAAGCTTCCAGAAACTGTTCGTCATTTCGGTaGAAAGGCTTAACCTTGCCAGTATTCTCCTCCATC +
Preference number: 6 (lower is better)
Translates to: MTKASRNCSSFR*KGLTLPVFSSI
Trigger: GATGGAGGAGAATACTGGCAAGGTTAAGCCTTTCAACCGAAATGACGAACAGTTTCTGGAAGCTTTTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000512739.5
CDS CAA 90 bp AAAGCTTCCAGAAACTGTTCGTCATTTCGGTTGAAAGGCTTAACCTaGCCAGTATTCTCCTCCATCTTATTAACAAGTTGGCAAACCCCT +
Preference number: 6 (lower is better)
Translates to: KASRNCSSFRLKGLT*PVFSSILLTSWQTP
Trigger: AGGGGTTTGCCAACTTGTTAATAAGATGGAGGAGAATACTGGCAAGGTTAAGCCTTTCAACCGAAATGACGAACAGTTTCTGGAAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
CDS CAA 90 bp TGCAAGCAGATGGCATCTATGAACCCAACTTGCATACTTGGGATTTaGTTTTTCTTCTCCCTGTTCATTAGATCAGTGGGTTCTATGTTG +
Preference number: 6 (lower is better)
Translates to: CKQMASMNPTCILGI*FFFSLFIRSVGSML
Trigger: CAACATAGAACCCACTGATCTAATGAACAGGGAGAAGAAAAACAAAATCCCAAGTATGCAAGTTGGGTTCATAGATGCCATCTGCTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000503412.1
CDS CAA 90 bp CCACAAAAGATGACAAAAGCTTCCAGAAACTGTTCGTCATTTCGGTaGAAAGGCTTAACCTTGCCAGTATTCTCCTCCATCTTATTAACA +
Preference number: 6 (lower is better)
Translates to: PQKMTKASRNCSSFR*KGLTLPVFSSILLT
Trigger: TGTTAATAAGATGGAGGAGAATACTGGCAAGGTTAAGCCTTTCAACCGAAATGACGAACAGTTTCTGGAAGCTTTTGTCATCTTTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000512739.5
CDS TCA 72 bp TGGCAAACCCAAAATAGAATGCAGAAAGGAGGCAACTaGCATAAGCAGTCTCAAATTTCAAATCTACACCTC +
Preference number: 6 (lower is better)
Translates to: WQTQNRMQKGGN*HKQSQISNLHL
Trigger: GAGGTGTAGATTTGAAATTTGAGACTGCTTATGTCAGTTGCCTCCTTTCTGCATTCTATTTTGGGTTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512739.5
CDS CAA 72 bp AGAAACTGTTCGTCATTTCGGTTGAAAGGCTTAACCTaGCCAGTATTCTCCTCCATCTTATTAACAAGTTGG +
Preference number: 6 (lower is better)
Translates to: RNCSSFRLKGLT*PVFSSILLTSW
Trigger: CCAACTTGTTAATAAGATGGAGGAGAATACTGGCAAGGTTAAGCCTTTCAACCGAAATGACGAACAGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000512739.5
CDS CAA 90 bp CTTAATTGGCATACAAAGAATGCTTTGTGTCTTGTAGCCTGTAATTaGGTCAACTTCTGCATTGAACCGAGGATCCTCATATGCATCTTT +
Preference number: 6 (lower is better)
Translates to: LNWHTKNALCLVACN*VNFCIEPRILICIF
Trigger: AAAGATGCATATGAGGATCCTCGGTTCAATGCAGAAGTTGACCAAATTACAGGCTACAAGACACAAAGCATTCTTTGTATGCCAATTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS CAA 90 bp AACAACCTCTTCCCTATGATTCTTAATTGGCATACAAAGAATGCTTaGTGTCTTGTAGCCTGTAATTTGGTCAACTTCTGCATTGAACCG +
Preference number: 6 (lower is better)
Translates to: NNLFPMILNWHTKNA*CLVACNLVNFCIEP
Trigger: CGGTTCAATGCAGAAGTTGACCAAATTACAGGCTACAAGACACAAAGCATTCTTTGTATGCCAATTAAGAATCATAGGGAAGAGGTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
CDS TCA 72 bp AGTCATACAGATTCCCAGCTTCTACCCAAGACTTGCTaGATCAGAACTTTCAGAAGTAGGGTATATAAATTT +
Preference number: 6 (lower is better)
Translates to: SHTDSQLLPKTC*IRTFRSRVYKF
Trigger: AAATTTATATACCCTACTTCTGAAAGTTCTGATTCAGCAAGTCTTGGGTAGAAGCTGGGAATCTGTATGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS TCA 72 bp ATAAGTTATTTAATGCCTTTTGCTTTGTATTATCAGTaGCTTTGCATCCCGCTAACGACTGTAGCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: ISYLMPFALYYQ*LCIPLTTVALL
Trigger: CAAGAGAGCTACAGTCGTTAGCGGGATGCAAAGTCACTGATAATACAAAGCAAAAGGCATTAAATAACTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502912.1
CDS CAA 72 bp TTCCCTATGATTCTTAATTGGCATACAAAGAATGCTTaGTGTCTTGTAGCCTGTAATTTGGTCAACTTCTGC +
Preference number: 6 (lower is better)
Translates to: FPMILNWHTKNA*CLVACNLVNFC
Trigger: GCAGAAGTTGACCAAATTACAGGCTACAAGACACAAAGCATTCTTTGTATGCCAATTAAGAATCATAGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000420633.1
CDS TCA 72 bp GTATCAGATGATTTTTCTAATTCCTCACACTCCATGTaGAACACACTAGAAAAAGAATCGGAGCAATCTTCA +
Preference number: 6 (lower is better)
Translates to: VSDDFSNSSHSM*NTLEKESEQSS
Trigger: TGAAGATTGCTCCGATTCTTTTTCTAGTGTGTTTCACATGGAGTGTGAGGAATTAGAAAAATCATCTGATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264805.9
ENST00000354960.8
ENST00000394439.5
ENST00000508914.1