Pregenerated sensors for PDE4DIP (Homo sapiens)
Ensembl gene IDs: ENSG00000178104Ensembl transcript IDs: ENST00000369347.8, ENST00000464103.5, ENST00000469668.2, ENST00000479369.6, ENST00000528060.1, ENST00000530472.5, ENST00000612094.1, ENST00000617031.4
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCTATCAGGGAACTTATTATGTTTCTGTAACACATaGCAGATACTTAGCCCGGTA | + |
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Preference number: 2 (lower is better) Translates to: TLQYFPRAPHALLSGNLLCFCNT*QILSPV Trigger: TACCGGGCTAAGTATCTGGCATGTGTTACAGAAACA...TAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| 3UTR-3UTR TCA 90 bp | TTTAATGTGGAATGGATGACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTTGTTTGCTGAATAAGTaGATCTATGTCTCTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: FNVEWMTLQYFPRAPHALCLLNK*IYVSCL Trigger: CAAGCAAGAGACATAGATTCACTTATTCAGCAAACA...AAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGTCATCCATTCCACATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| 3UTR-3UTR TCA 90 bp | ACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCTATCAGGGAACTTATTATGTTTGCTGAATAAGTaGATCTATGTCTCTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: TLQYFPRAPHALLSGNLLCLLNK*IYVSCL Trigger: CAAGCAAGAGACATAGATTCACTTATTCAGCAAACA...TAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCAATATTTCCCCAGAGCACCCCATGCTCTTCTATCAGGGAACTTATTAAAATGTTTGCTGAATAAGTaGATCTATGTCTCTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LQYFPRAPHALLSGNLLKCLLNK*IYVSCL Trigger: CAAGCAAGAGACATAGATTCACTTATTCAGCAAACA...TTTTAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCTGGGGAAATATTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR TCA 90 bp | AATGTGGAATGGATGACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCTACCTTCTTCAGGTCATTaGGGTGCTTCTCAAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: NVEWMTLQYFPRAPHALLPSSGH*GASQSL Trigger: GAGACTTTGAGAAGCACCTCAATGACCTGAAGAAGG...TAGAAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGTCATCCATTCCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530472.5 |
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| CDS-3UTR GCA 90 bp | GCCAGATACTTAGCCCGGTATCTGGCATGTGGCATGCCCAGTAAATGTTTGCTGTGTTTCTGTAACACATaGCAGATACTTAGCCCGGTA | + |
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Preference number: 4 (lower is better) Translates to: ARYLARYLACGMPSKCLLCFCNT*QILSPV Trigger: TACCGGGCTAAGTATCTGGCATGTGTTACAGAAACA...CAGCAAACATTTACTGGGCATGCCACATGCCAGATACCGGGCTAAGTATCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR CCA 90 bp | AATGTGGAATGGATGACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCTACATTCTTTGCTAGCCTaGATTCCTCCTGCAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: NVEWMTLQYFPRAPHALLHSLLA*IPPAEA Trigger: AGCTTCTGCAGGAGGAATCCAGGCTAGCAAAGAATG...TAGAAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGTCATCCATTCCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR TCA 90 bp | TTTAATGTGGAATGGATGACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCCTTCTTCAGGTCATTaGGGTGCTCAGGGAGATATT | + |
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Preference number: 4 (lower is better) Translates to: FNVEWMTLQYFPRAPHALPSSGH*GAQGDI Trigger: AATATCTCCCTGAGCACCTCAATGACCTGAAGAAGG...AAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGTCATCCATTCCACATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464103.5 |
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| CDS-3UTR GCA 90 bp | TTTAATGTGGAATGGATGACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTAGCCTGGATTCCTCCTaGAGAAGCTGGATCTTATTC | + |
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Preference number: 4 (lower is better) Translates to: FNVEWMTLQYFPRAPHALSLDSS*RSWILF Trigger: GAATAAGATCCAGCTTCTGCAGGAGGAATCCAGGCT...AAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGTCATCCATTCCACATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR GCA 90 bp | TTTAATGTGGAATGGATGACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTTTCAGGTCATTGAGGTaGTCAGGGAGATATTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: FNVEWMTLQYFPRAPHALFRSLR*SGRYLR Trigger: CCGCAAATATCTCCCTGAGCACCTCAATGACCTGAA...AAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGTCATCCATTCCACATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000464103.5 |
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| CDS-3UTR CCA 90 bp | TTTAATGTGGAATGGATGACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCATTCTTTGCTAGCCTaGATTCCTCCTGCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FNVEWMTLQYFPRAPHALHSLLA*IPPAEA Trigger: AGCTTCTGCAGGAGGAATCCAGGCTAGCAAAGAATG...AAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGTCATCCATTCCACATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR TCA 90 bp | ACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCTATCAGGGAACTTATTATTAATGTGGAATGGATaGCCCTCCAATATTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TLQYFPRAPHALLSGNLLLMWNG*PSNISP Trigger: TGGGGAAATATTGGAGGGTCATCCATTCCACATTAA...TAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR GCA 90 bp | TTTAATGTGGAATGGATGACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTTGTTTCTGTAACACATaGCAGATACTTAGCCCGGTA | + |
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Preference number: 4 (lower is better) Translates to: FNVEWMTLQYFPRAPHALCFCNT*QILSPV Trigger: TACCGGGCTAAGTATCTGGCATGTGTTACAGAAACA...AAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGTCATCCATTCCACATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR TCA 90 bp | ATTAGGTCTTTTGTTTCTGTAACACATGCCAGATACTTAGCCCGGTATCTGGCATTAATGTGGAATGGATaGCCCTCCAATATTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRSFVSVTHARYLARYLALMWNG*PSNISP Trigger: TGGGGAAATATTGGAGGGTCATCCATTCCACATTAA...TGCCAGATACCGGGCTAAGTATCTGGCATGTGTTACAGAAACAAAAGACCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR GCA 90 bp | CTCCAATATTTCCCCAGAGCACCCCATGCTCTTCTATCAGGGAACTTATTAAAATGTTTCTGTAACACATaGCAGATACTTAGCCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LQYFPRAPHALLSGNLLKCFCNT*QILSPV Trigger: TACCGGGCTAAGTATCTGGCATGTGTTACAGAAACA...TTTTAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCTGGGGAAATATTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR GCA 90 bp | AGAGCACCCCATGCTCTTCTATCAGGGAACTTATTAAAATCATGTAACATGTTTAGCCTGGATTCCTCCTaGAGAAGCTGGATCTTATTC | + |
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Preference number: 4 (lower is better) Translates to: RAPHALLSGNLLKSCNMFSLDSS*RSWILF Trigger: GAATAAGATCCAGCTTCTGCAGGAGGAATCCAGGCT...AAACATGTTACATGATTTTAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR CCA 90 bp | AGAGCACCCCATGCTCTTCTATCAGGGAACTTATTAAAATCATGTAACATGTTTCATTCTTTGCTAGCCTaGATTCCTCCTGCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAPHALLSGNLLKSCNMFHSLLA*IPPAEA Trigger: AGCTTCTGCAGGAGGAATCCAGGCTAGCAAAGAATG...AAACATGTTACATGATTTTAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR CCA 90 bp | ACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCTATCAGGGAACTTATTATCTTTTAATGTGGAATaGATGACCCTCCAATATTTC | + |
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Preference number: 4 (lower is better) Translates to: TLQYFPRAPHALLSGNLLSFNVE*MTLQYF Trigger: GAAATATTGGAGGGTCATCCATTCCACATTAAAAGA...TAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR TCA 90 bp | ATTAGGTCTTTTGTTTCTGTAACACATGCCAGATACTTAGCCCGGTATCTGGCATGTTTGCTGAATAAGTaGATCTATGTCTCTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IRSFVSVTHARYLARYLACLLNK*IYVSCL Trigger: CAAGCAAGAGACATAGATTCACTTATTCAGCAAACA...TGCCAGATACCGGGCTAAGTATCTGGCATGTGTTACAGAAACAAAAGACCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR CCA 90 bp | ATTAGGTCTTTTGTTTCTGTAACACATGCCAGATACTTAGCCCGGTATCTGGCATCTTTTAATGTGGAATaGATGACCCTCCAATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRSFVSVTHARYLARYLASFNVE*MTLQYF Trigger: GAAATATTGGAGGGTCATCCATTCCACATTAAAAGA...TGCCAGATACCGGGCTAAGTATCTGGCATGTGTTACAGAAACAAAAGACCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR TCA 90 bp | AGAGCACCCCATGCTCTTCTATCAGGGAACTTATTAAAATCATGTAACATGTTTTGTTTGCTGAATAAGTaGATCTATGTCTCTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAPHALLSGNLLKSCNMFCLLNK*IYVSCL Trigger: CAAGCAAGAGACATAGATTCACTTATTCAGCAAACA...AAACATGTTACATGATTTTAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS TCA 90 bp | GTCCAATGGGCTAAATCAGAACACTTAGGTTGTCCAGTGTTTAAATaGGCAGTGCAGGAAAAGCGTGGAGCCAATGCCTGTCACGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: VQWAKSEHLGCPVFK*AVQEKRGANACHVV Trigger: TACTACGTGACAGGCATTGGCTCCACGCTTTTCCTGCACTGCTCATTTAAACACTGGACAACCTAAGTGTTCTGATTTAGCCCATTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469668.2 |
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| CDS-3UTR CAA 90 bp | ACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCTATCAGGGAACTTATTACATGTAACATGTTTCTaGGTGACAAGAATTAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: TLQYFPRAPHALLSGNLLHVTCF*VTRIRS Trigger: AGACCTAATTCTTGTCACCAAGAAACATGTTACATG...TAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR CAA 90 bp | TTTAATGTGGAATGGATGACCCTCCAATATTTCCCCAGAGCACCCCATGCTCTTCATGTAACATGTTTCTaGGTGACAAGAATTAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: FNVEWMTLQYFPRAPHALHVTCF*VTRIRS Trigger: AGACCTAATTCTTGTCACCAAGAAACATGTTACATG...AAGAGCATGGGGTGCTCTGGGGAAATATTGGAGGGTCATCCATTCCACATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR CAA 90 bp | AGAGCACCCCATGCTCTTCTATCAGGGAACTTATTAAAATCATGTAACATGTTTTCCTTCTTCAGGTCATaGAGGTGCTCAGGGAGATAT | + |
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Preference number: 5 (lower is better) Translates to: RAPHALLSGNLLKSCNMFSFFRS*RCSGRY Trigger: ATATCTCCCTGAGCACCTCAATGACCTGAAGAAGGA...AAACATGTTACATGATTTTAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000464103.5 |
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| CDS-3UTR CAA 90 bp | ATTAGGTCTTTTGTTTCTGTAACACATGCCAGATACTTAGCCCGGTATCTGGCACATGTAACATGTTTCTaGGTGACAAGAATTAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: IRSFVSVTHARYLARYLAHVTCF*VTRIRS Trigger: AGACCTAATTCTTGTCACCAAGAAACATGTTACATG...TGCCAGATACCGGGCTAAGTATCTGGCATGTGTTACAGAAACAAAAGACCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369347.8 ENST00000464103.5 ENST00000530472.5 |
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| CDS-3UTR CAA 90 bp | AGAGCACCCCATGCTCTTCTATCAGGGAACTTATTAAAATCATGTAACATGTTTTCCTTCTTCAGGTCATaGAGGTGCTTCTCAAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: RAPHALLSGNLLKSCNMFSFFRS*RCFSKS Trigger: AGACTTTGAGAAGCACCTCAATGACCTGAAGAAGGA...AAACATGTTACATGATTTTAATAAGTTCCCTGATAGAAGAGCATGGGGTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000530472.5 |
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| CDS GCA 90 bp | GTTTATTTCTCCGTAGACACCCTCCAACACGTTTGTGTCCTCATTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTCA | + |
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Preference number: 5 (lower is better) Translates to: VYFSVDTLQHVCVLI*WVNCYIVITCIFYS Trigger: TGAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGTGTCTACGGAGAAATAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469668.2 |
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| CDS GCA 90 bp | CAAGACCTCAAACTCAAATCCCTCCAACACGTTTGTGTCCTCATTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTCA | + |
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Preference number: 5 (lower is better) Translates to: QDLKLKSLQHVCVLI*WVNCYIVITCIFYS Trigger: TGAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGATTTGAGTTTGAGGTCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528060.1 |
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| CDS TCA 72 bp | CTTAGAAGCCGATCCTTCCCTAGGTATGCCTCCAGATaGGAAAAGAGCCCAGTCTACATCTTGATTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: LRSRSFPRYASR*EKSPVYILISH Trigger: GTGTGAAATCAAGATGTAGACTGGGCTCTTTTCTCATCTGGAGGCATACCTAGGGAAGGATCGGCTTCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617031.4 |
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| CDS CAA 90 bp | CAGCGTGTAAGCATTCCCATTTCTATGCAGCCTCACCGGCATCTGTaGTTTTTAGACGTTTTAATAGTAGCCATTCTGACTGGTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: QRVSIPISMQPHRHL*FLDVLIVAILTGVR Trigger: TCTCACACCAGTCAGAATGGCTACTATTAAAACGTCTAAAAACAACAGATGCCGGTGAGGCTGCATAGAAATGGGAATGCTTACACGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612094.1 |
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| CDS TCA 72 bp | ATGCCTCCAGATGAGAAAAGAGCCCAGTCTACATCTTaGTTTCACACTTATGAGACTCCAAACAGATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: MPPDEKRAQSTS*FHTYETPNRSQ Trigger: CTGAGATCTGTTTGGAGTCTCATAAGTGTGAAATCAAGATGTAGACTGGGCTCTTTTCTCATCTGGAGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617031.4 |
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| CDS CAA 72 bp | CTCCGTAGACACCCTCCAACACGTTTGTGTCCTCATTaGCTGGGTCAATTGCTACATTGTTATAACTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: LRRHPPTRLCPH*LGQLLHCYNLY Trigger: ATACAAGTTATAACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGTGTCTACGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469668.2 |
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| CDS CAA 72 bp | ACTTGTTTATTTCTCCGTAGACACCCTCCAACACGTTaGTGTCCTCATTTGCTGGGTCAATTGCTACATTGT | + |
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Preference number: 6 (lower is better) Translates to: TCLFLRRHPPTR*CPHLLGQLLHC Trigger: ACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGTGTCTACGGAGAAATAAACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469668.2 |
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| CDS CAA 90 bp | TCGTGCATCACTTGTTTATTTCTCCGTAGACACCCTCCAACACGTTaGTGTCCTCATTTGCTGGGTCAATTGCTACATTGTTATAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SCITCLFLRRHPPTR*CPHLLGQLLHCYNL Trigger: CAAGTTATAACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGTGTCTACGGAGAAATAAACAAGTGATGCACGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469668.2 |
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| CDS GCA 72 bp | TCCGTAGACACCCTCCAACACGTTTGTGTCCTCATTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATA | + |
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Preference number: 6 (lower is better) Translates to: SVDTLQHVCVLI*WVNCYIVITCI Trigger: TATACAAGTTATAACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGTGTCTACGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469668.2 |
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| CDS CAA 72 bp | GATATGGAAATGGAGGCTGAGGGAGGTCAAGTAACTTaGCTTGAAAACACACCATTACCTACATTAGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: DMEMEAEGGQVT*LENTPLPTLVQ Trigger: CTGAACTAATGTAGGTAATGGTGTGTTTTCAAGCAAAGTTACTTGACCTCCCTCAGCCTCCATTTCCATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479369.6 |
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| CDS CAA 72 bp | AGCATTCCCATTTCTATGCAGCCTCACCGGCATCTGTaGTTTTTAGACGTTTTAATAGTAGCCATTCTGACT | + |
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Preference number: 6 (lower is better) Translates to: SIPISMQPHRHL*FLDVLIVAILT Trigger: AGTCAGAATGGCTACTATTAAAACGTCTAAAAACAACAGATGCCGGTGAGGCTGCATAGAAATGGGAATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612094.1 |
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| CDS CAA 90 bp | TATTTCGCAGATATGGAAATGGAGGCTGAGGGAGGTCAAGTAACTTaGCTTGAAAACACACCATTACCTACATTAGTTCAGAGCAGAACA | + |
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Preference number: 6 (lower is better) Translates to: YFADMEMEAEGGQVT*LENTPLPTLVQSRT Trigger: TGTTCTGCTCTGAACTAATGTAGGTAATGGTGTGTTTTCAAGCAAAGTTACTTGACCTCCCTCAGCCTCCATTTCCATATCTGCGAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479369.6 |
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| CDS CAA 72 bp | CGAAGATCAGATTGCTGTAGGTGTGTAGCTTTATTTTaGGGTTCTCTATTTGCTTCCATTGGTCTATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: RRSDCCRCVALF*GSLFASIGLCV Trigger: GACACATAGACCAATGGAAGCAAATAGAGAACCCAAAAATAAAGCTACACACCTACAGCAATCTGATCTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612094.1 |
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| CDS CAA 72 bp | CAAACTCAAATCCCTCCAACACGTTTGTGTCCTCATTaGCTGGGTCAATTGCTACATTGTTATAACTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: QTQIPPTRLCPH*LGQLLHCYNLY Trigger: ATACAAGTTATAACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGATTTGAGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528060.1 |
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| CDS CAA 90 bp | GCAAGACCTCAAACTCAAATCCCTCCAACACGTTTGTGTCCTCATTaGCTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTC | + |
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Preference number: 6 (lower is better) Translates to: ARPQTQIPPTRLCPH*LGQLLHCYNLYILF Trigger: GAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGATTTGAGTTTGAGGTCTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528060.1 |
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| CDS GCA 72 bp | AAACTCAAATCCCTCCAACACGTTTGTGTCCTCATTTaGTGGGTCAATTGCTACATTGTTATAACTTGTATA | + |
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Preference number: 6 (lower is better) Translates to: KLKSLQHVCVLI*WVNCYIVITCI Trigger: TATACAAGTTATAACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGATTTGAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528060.1 |
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| CDS CAA 90 bp | TGTTTATTTCTCCGTAGACACCCTCCAACACGTTTGTGTCCTCATTaGCTGGGTCAATTGCTACATTGTTATAACTTGTATATTTTATTC | + |
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Preference number: 6 (lower is better) Translates to: CLFLRRHPPTRLCPH*LGQLLHCYNLYILF Trigger: GAATAAAATATACAAGTTATAACAATGTAGCAATTGACCCAGCAAATGAGGACACAAACGTGTTGGAGGGTGTCTACGGAGAAATAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469668.2 |
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