RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE4C (Homo sapiens)

Ensembl gene IDs: ENSG00000105650

Ensembl transcript IDs: ENST00000262805.16, ENST00000447275.7, ENST00000539010.5, ENST00000593594.1, ENST00000594465.7, ENST00000594617.7, ENST00000595343.5, ENST00000597297.1, ENST00000597360.5, ENST00000597573.1, ENST00000598111.7, ENST00000599188.5, ENST00000599754.1, ENST00000610023.1

Found 804 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGGTCTGCTGGTCCAGGAAGGTCCGGGAGATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTTTCGGACAGGTGGGTCAACTCCCGG +
Preference number: 1 (lower is better)
Translates to: SVCWSRKVREMYSDT*FPERLVSDRWVNSR
Trigger: CCGGGAGTTGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACATCTCCCGGACCTTCCTGGACCAGCAGACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598111.7
3UTR TCA 90 bp CAGGGACCCCACGCCTCTCGCGACTTCGTCTCTTCATCTGGACCCTaGAACTGTTCCCACGGGGGCCACCCAGGACTCCTGGACCCAAGT +
Preference number: 1 (lower is better)
Translates to: QGPHASRDFVSSSGP*NCSHGGHPGLLDPS
Trigger: ACTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAACAGTTTCAGGGTCCAGATGAAGAGACGAAGTCGCGAGAGGCGTGGGGTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595343.5
3UTR CCA 90 bp CCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTaGCTGAGGAGAGGCTGGCACTGTGGCAGAGCCCATGTAGGCCAC +
Preference number: 1 (lower is better)
Translates to: PVAPPGQSGPQSVGQ*LRRGWHCGRAHVGH
Trigger: GTGGCCTACATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR GCA 90 bp CAGAGCCCCCTCTTTTTATTGTTGTTGTCGTTGCCCAGGCTGGAGTaGAGTGGCGCGACCTCGGCTCACCACAACCTCCACCTCCCGGGT +
Preference number: 1 (lower is better)
Translates to: QSPLFLLLLSLPRLE*SGATSAHHNLHLPG
Trigger: ACCCGGGAGGTGGAGGTTGTGGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCAACGACAACAACAATAAAAAGAGGGGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR CCA 90 bp CATCTGGACCCTGAAACTGTTCCCACGGGGGCCACCCAGGACTCCTaGACCCAAGTTCCAGATCTGTTCCCCGAGTGCCTGTGTGACCAT +
Preference number: 1 (lower is better)
Translates to: HLDPETVPTGATQDS*TQVPDLFPECLCDH
Trigger: ATGGTCACACAGGCACTCGGGGAACAGATCTGGAACTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAACAGTTTCAGGGTCCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595343.5
3UTR TCA 90 bp TCAGTTCAAACTGGAATCTGTCAGGCCCGTCCCGCTCGGGGTTGGTaGGGTCTGAGGGACTTCGGGGGATCTTGCTCTGGTACCACTCTC +
Preference number: 1 (lower is better)
Translates to: SVQTGICQARPARGW*GLRDFGGSCSGTTL
Trigger: GAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGGGCCTGACAGATTCCAGTTTGAACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR GCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTaGAGTTCACGCAGGGCTGGCCCTAAGTCCTCTGGTTGTCGAGGG +
Preference number: 1 (lower is better)
Translates to: KSACQEPKGFTIHCP*SSRRAGPKSSGCRG
Trigger: CCCTCGACAACCAGAGGACTTAGGGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599188.5
3UTR TCA 90 bp CCGCTTGGTAGAGGAAGACAGGGAGATGCCTTTGGGATGGTCTCCTaGCTCCCCACCCTTTGTGCAGGGCTACTACAGAGGCAGAAAGCT +
Preference number: 1 (lower is better)
Translates to: PLGRGRQGDAFGMVS*LPTLCAGLLQRQKA
Trigger: AGCTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGACCATCCCAAAGGCATCTCCCTGTCTTCCTCTACCAAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR GCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTaGCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAG +
Preference number: 1 (lower is better)
Translates to: GKVKQEPHGASSWKV*LPRAKGLYHPLPLQ
Trigger: CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR GCA 90 bp ACAGGGAGATGCCTTTGGGATGGTCTCCTGACTCCCCACCCTTTGTaGAGGGCTACTACAGAGGCAGAAAGCTGGCACGAAGTAGATGAG +
Preference number: 1 (lower is better)
Translates to: TGRCLWDGLLTPHPL*RATTEAESWHEVDE
Trigger: CTCATCTACTTCGTGCCAGCTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGACCATCCCAAAGGCATCTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR CCA 90 bp TTGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCACATaGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCT +
Preference number: 1 (lower is better)
Translates to: LIVSLNGWESEAGAT*SLFLESLPAKSQRA
Trigger: AGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR CCA 90 bp TCTAGGGTCAGAGTGGACCCCAGCCAGGTGCCTCCAATTAGACCCTaGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGG +
Preference number: 1 (lower is better)
Translates to: SRVRVDPSQVPPIRP*EPPITKSLIVSLNG
Trigger: CCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGGTCTAATTGGAGGCACCTGGCTGGGGTCCACTCTGACCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR CCA 90 bp TGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTaGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGT +
Preference number: 1 (lower is better)
Translates to: WEPPITKSLIVSLNG*ESEAGATWSLFLES
Trigger: ACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR CAA 90 bp CCACTGATCCGGGACATGGGCTGTGGGGCCTCCTCAGCGGTCACCTaGGGCAGCTCCACCTCGGTCTGCTGGTCCAGGAAGGTCCGGGAG +
Preference number: 2 (lower is better)
Translates to: PLIRDMGCGASSAVT*GSSTSVCWSRKVRE
Trigger: CTCCCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGGATCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598111.7
3UTR-3UTR TCA 90 bp GAACACAGCCTCGAGGGCGGGCGTAGCCAGCAGCACATGCGTGGACTGGGCCACGCCCATGTAGGCCACTaGTCCGGGACATGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: EHSLEGGRSQQHMRGLGHAHVGH*SGTWAV
Trigger: CACAGCCCATGTCCCGGATCAGTGGCCTACATGGGC...GTGGCCCAGTCCACGCATGTGCTGCTGGCTACGCCCGCCCTCGAGGCTGTGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599188.5
3UTR-3UTR GCA 90 bp CTGTCAGGCCCGTCCCGCTCGGGGTTGGTGAGGTCTGAGGGACTTCGGGGGATCAGCTCCACCTCGGTCTaGTGGTCCAGGAAGGTCCGG +
Preference number: 2 (lower is better)
Translates to: LSGPSRSGLVRSEGLRGISSTSV*WSRKVR
Trigger: CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCT...GATCCCCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGGGCCTGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598111.7
3UTR-3UTR CCA 90 bp GAACACAGCCTCGAGGGCGGGCGTAGCCAGCAGCACATGCGTGGACTGGGCCACTGGCTGAGGAGAGGCTaGCACTGTGGCAGAGCCCAT +
Preference number: 2 (lower is better)
Translates to: EHSLEGGRSQQHMRGLGHWLRRG*HCGRAH
Trigger: ATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCA...GTGGCCCAGTCCACGCATGTGCTGCTGGCTACGCCCGCCCTCGAGGCTGTGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599188.5
3UTR-3UTR CCA 90 bp ATCTGGACCCTGAAACTGTTCCCACGGGGGCCACCCAGGACTCCTGGACCCAAGGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: IWTLKLFPRGPPRTPGPKGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...CTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAACAGTTTCAGGGTCCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595343.5
3UTR-3UTR TCA 90 bp GAACACAGCCTCGAGGGCGGGCGTAGCCAGCAGCACATGCGTGGACTGGGCCACTTAGCTCCGCCACCTTaGACACATCAAGTCCCCACT +
Preference number: 2 (lower is better)
Translates to: EHSLEGGRSQQHMRGLGHLAPPP*THQVPT
Trigger: AGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAA...GTGGCCCAGTCCACGCATGTGCTGCTGGCTACGCCCGCCCTCGAGGCTGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599188.5
3UTR-3UTR GCA 90 bp GGGTCTGGGCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCGTCGTGGATGGCGCTTaGAAAGAGGGCAGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: GSGPASGDRSSVSGNSKAVVDGA*KEGSQD
Trigger: ATCCTGGCTGCCCTCTTTGCAAGCGCCATCCACGAC...GGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGCCCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp CATCTCCCCCACCGAGTGCCGGGTCTGCAGCGTCTCCAACTGATCCAGGCACCAATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: HLPHRVPGLQRLQLIQAPMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...TGGTGCCTGGATCAGTTGGAGACGCTGCAGACCCGGCACTCGGTGGGGGAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
3UTR-3UTR CCA 90 bp GGGTCTGGGCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCCGGGGGATCTTGCTCTaGTACCACTCTCGATTGTCC +
Preference number: 2 (lower is better)
Translates to: GSGPASGDRSSVSGNSKARGILL*YHSRLS
Trigger: GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCG...GGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGCCCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp GGTCAACTCCCGGTTCAGGATCCGCTTGAACTTGTTGGAGGCCATCTCCCCCACGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: GQLPVQDPLELVGGHLPHGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...GTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCGGGAGTTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
3UTR-3UTR CCA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598111.7
3UTR-3UTR CCA 90 bp TTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCTTCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACA +
Preference number: 2 (lower is better)
Translates to: LASCSSWSVWTPKRGTVASSWSV*TPKRGT
Trigger: TGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGA...AGCCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp GGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCATGCGGTCCGTCCACTaGCGGTACAGGGGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: GVQCQATPRPLWLKLSLPMRSVH*RYRGSG
Trigger: GCCGCTGCCCCTGTACCGCCAGTGGACGGACCGCAT...GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp AGCTCCGCCACCTTGAACACATCAAGTCCCCACTTGTTGGTGTCTTCTAGCTCCCCGGGACATGGGCTGTaGGGCCTCCTCAGCGGTCAC +
Preference number: 2 (lower is better)
Translates to: SSATLNTSSPHLLVSSSSPGHGL*GLLSGH
Trigger: GTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGG...GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598111.7
3UTR-3UTR CCA 90 bp AGCCTCAGGGGCCTCCCTCCCTCTAGGGGGAGTCTGAGGCAGTTTCAGGAATCACAGGCTGGAGTGCAGTaGCATGATGTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SLRGLPPSRGSLRQFQESQAGVQ*HDVGSL
Trigger: CAGTGAGCCGACATCATGCCACTGCACTCCAGCCTG...TGATTCCTGAAACTGCCTCAGACTCCCCCTAGAGGGAGGGAGGCCCCTGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR-3UTR GCA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTACCATCCATTGCCCCTaGAGTTCACGCAGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLTIHCP*SSRRAG
Trigger: GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGT...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp GGATGGTCTCCTGACTCCCCACCCTTTGTGCAGGGCTACTACAGAGGCAGAAAGAGTCTAGGGTCAGAGTaGACCCCAGCCAGGTGCCTC +
Preference number: 2 (lower is better)
Translates to: GWSPDSPPFVQGYYRGRKSLGSE*TPARCL
Trigger: GAGGCACCTGGCTGGGGTCCACTCTGACCCTAGACT...CTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGACCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR-3UTR CCA 90 bp TGTCTTCTAGCTCCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGAGAGGCTGGCACTGTaGCAGAGCCCATGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: CLLAPWPVAPPGQSGPQSERLAL*QSPCRP
Trigger: TGGCCTACATGGGCTCTGCCACAGTGCCAGCCTCTC...GCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp CGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTATGGCTGAGGAGAGGCTaGCACTGTGGCAGAGCCCAT +
Preference number: 2 (lower is better)
Translates to: RLQGTGVQCQATPRPLWLWLRRG*HCGRAH
Trigger: ATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCA...TAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp AGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCCTATCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACA +
Preference number: 2 (lower is better)
Translates to: SQRALPSIAPAVHAGLALSSWSV*TPKRGT
Trigger: TGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGA...TAGGGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599188.5
3UTR-3UTR CCA 90 bp GCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCCGGGGGATCTTGCTCTaGTACCACTCTCGATTGTCC +
Preference number: 2 (lower is better)
Translates to: AGFRGQEFSVRQLQGLFGRGILL*YHSRLS
Trigger: GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCG...GCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp GGGACCCCACGCCTCTCGCGACTTCGTCTCTTCATCTGGACCCTGAAACTGTTCATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: GTPRLSRLRLFIWTLKLFMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...GAACAGTTTCAGGGTCCAGATGAAGAGACGAAGTCGCGAGAGGCGTGGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595343.5
3UTR-3UTR CCA 90 bp GGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTTCCCCTCAGCGGTCACCTTaGGCAGCTCCACCTCGGTCT +
Preference number: 2 (lower is better)
Translates to: GNSKASLAKAVSSPSSSSPQRSP*AAPPRS
Trigger: AGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGG...GGAAGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598111.7
3UTR-3UTR TCA 90 bp AGCTCCGCCACCTTGAACACATCAAGTCCCCACTTGTTGGTGTCTTCTAGCTCCGCCCATGTAGGCCACTaGTCCGGGACATGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SSATLNTSSPHLLVSSSSAHVGH*SGTWAV
Trigger: CACAGCCCATGTCCCGGATCAGTGGCCTACATGGGC...GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp GTGGCCAGCACCATGTCAATGACCATCCTGCGCAGACTCAGTCGCTGCTTGGCGCATGGAGCCTCTTCCTaGAAAGTCTGCCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: VASTMSMTILRRLSRCLAHGASS*KVCLPR
Trigger: TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG...CGCCAAGCAGCGACTGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599188.5
3UTR-3UTR CCA 90 bp GTGCACCAGGTTCTGCAAGACCTGGATTCGGTCGGAATAGTTGTCCAGGAGGAGGAGAGGCTGGCACTGTaGCAGAGCCCATGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: VHQVLQDLDSVGIVVQEEERLAL*QSPCRP
Trigger: TGGCCTACATGGGCTCTGCCACAGTGCCAGCCTCTC...CTCCTCCTGGACAACTATTCCGACCGAATCCAGGTCTTGCAGAACCTGGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp GGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTTCCGGTCCACGTCGTGGATaGCGCTTGCAAAGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GNSKASLAKAVSSPSSSSGPRRG*RLQRGQ
Trigger: CTGCCCTCTTTGCAAGCGCCATCCACGACGTGGACC...GGAAGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR GCA 90 bp TGGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCGGCTTTACCATCCATTaGCCCTGCAGTTCACGCAGG +
Preference number: 2 (lower is better)
Translates to: WESEAGATWSLFLESLPAGFTIH*PCSSRR
Trigger: CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCC...GGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR GCA 90 bp GGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCGCAGACTCAGTCGCTaGTTGGCGCTGAGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: GVQCQATPRPLWLKLSLPRRLSR*LALRFW
Trigger: CCAGAACCTCAGCGCCAAGCAGCGACTGAGTCTGCG...GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCGAAGCAGGAGCCACATaGAGCCTCTTCCTGGAAAGT +
Preference number: 2 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSEAGAT*SLFLES
Trigger: ACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTC...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR CCA 90 bp CCTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAACAAAGCGTGGGACAGTaGCTGAGGAGAGGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: PPLLPPHPLPLPPPESVQQSVGQ*LRRGWH
Trigger: GTGCCAGCCTCTCCTCAGCCACTGTCCCACGCTTTG...TTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR TCA 90 bp GCAAGACCTGGATTCGGTCGGAATAGTTGTCCAGGAGGAGGACACCGAGGCTTGTTAGCTCCGCCACCTTaGACACATCAAGTCCCCACT +
Preference number: 2 (lower is better)
Translates to: ARPGFGRNSCPGGGHRGLLAPPP*THQVPT
Trigger: AGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAA...CAAGCCTCGGTGTCCTCCTCCTGGACAACTATTCCGACCGAATCCAGGTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR TCA 90 bp GGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCGTCGCTGCTTGGCGCTaGGGTTCTGGAAGATATCGC +
Preference number: 2 (lower is better)
Translates to: GVQCQATPRPLWLKLSLPVAAWR*GSGRYR
Trigger: GCGATATCTTCCAGAACCTCAGCGCCAAGCAGCGAC...GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR GCA 90 bp GTGCACCAGGTTCTGCAAGACCTGGATTCGGTCGGAATAGTTGTCCAGGAGGAGGGCTTTACCATCCATTaGCCCTGCAGTTCACGCAGG +
Preference number: 2 (lower is better)
Translates to: VHQVLQDLDSVGIVVQEEGFTIH*PCSSRR
Trigger: CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCC...CTCCTCCTGGACAACTATTCCGACCGAATCCAGGTCTTGCAGAACCTGGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599188.5
3UTR-3UTR GCA 90 bp GGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCAGCTCCTTGGCCAGTTaGTCCTCCTGGTCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: GVQCQATPRPLWLKLSLPSSLAS*SSWSVW
Trigger: CCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCT...GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp GACAGCACCTCTCCTCACAGGGATAGAAGCCCAGGAGAAAGACACCAGGGCATCGTCTCCCTAAATGGGTaGGAAAGTGAAGCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: DSTSPHRDRSPGERHQGIVSLNG*ESEAGA
Trigger: GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGAC...GATGCCCTGGTGTCTTTCTCCTGGGCTTCTATCCCTGTGAGGAGAGGTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR CCA 90 bp CCTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAGGATGGTCCACGTCGTaGATGGCGCTTGCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: PPLLPPHPLPLPPPESVQGWSTS*MALAKR
Trigger: CCTCTTTGCAAGCGCCATCCACGACGTGGACCATCC...TTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR CAA 90 bp AAGACAGGGAGATGCCTTTGGGATGGTCTCCTGACTCCCCACCCTTaGTGCAGGGCTACTACAGAGGCAGAAAGCTGGCACGAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: KTGRCLWDGLLTPHP*CRATTEAESWHEVD
Trigger: ATCTACTTCGTGCCAGCTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGACCATCCCAAAGGCATCTCCCTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR-3UTR CCA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCCCTCCAATTAGACCCTaGGAGCCACCTATAACTAAG +
Preference number: 2 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSPPIRP*EPPITK
Trigger: CTTAGTTATAGGTGGCTCCCAGGGTCTAATTGGAGG...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR CCA 90 bp TTAAGTGACAGATGTGACTCAAGAGTGACCACTGGAGAGGGTGGACTAGAGGCTAGTCTAGGGTCAGAGTaGACCCCAGCCAGGTGCCTC +
Preference number: 2 (lower is better)
Translates to: LSDRCDSRVTTGEGGLEASLGSE*TPARCL
Trigger: GAGGCACCTGGCTGGGGTCCACTCTGACCCTAGACT...AGCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAGTCACATCTGTCACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR CCA 90 bp GGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTTCCTGTCTTCTAGCTCCTTaGCCAGTTGCTCCTCCTGGT +
Preference number: 2 (lower is better)
Translates to: GNSKASLAKAVSSPSSSSCLLAP*PVAPPG
Trigger: ACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACA...GGAAGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp CGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTACAAGTCCCCACTTGTTaGTGTCTTCTAGCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: RLQGTGVQCQATPRPLWLQVPTC*CLLAPW
Trigger: CCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTG...TAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR GCA 90 bp GGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCGACTTCGGGGGATCTTaGTCTGGTACCACTCTCGAT +
Preference number: 2 (lower is better)
Translates to: GVQCQATPRPLWLKLSLPDFGGS*SGTTLD
Trigger: ATCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTC...GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR CAA 90 bp AATATGATAGCTGTGAGGGGCCGGTTCCCACTTAGCTCCGCCACCTaGAACACATCAAGTCCCCACTTGTTGGTGTCTTCTAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: NMIAVRGRFPLSSAT*NTSSPHLLVSSSSL
Trigger: CAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAGTGGGAACCGGCCCCTCACAGCTATCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CCA 90 bp GCGTCGTTGTACATAAGCGCCAGCTCTGAGTTGGTGTTAATCAGAAACTGGTTGGCCAGTTGCTCCTCCTaGTCAGTCTGGACCCCAAAG +
Preference number: 2 (lower is better)
Translates to: ASLYISASSELVLIRNWLASCSS*SVWTPK
Trigger: CTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGC...CAACCAGTTTCTGATTAACACCAACTCAGAGCTGGCGCTTATGTACAACGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR CAA 90 bp CAGGTGCCTCCAATTAGACCCTGGGAGCCACCTATAACTAAGAGCTaGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCACA +
Preference number: 2 (lower is better)
Translates to: QVPPIRPWEPPITKS*IVSLNGWESEAGAT
Trigger: TGTGGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGGTCTAATTGGAGGCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR CCA 90 bp TTAAGTGACAGATGTGACTCAAGAGTGACCACTGGAGAGGGTGGACTAGAGGCTGTCTCCCTAAATGGGTaGGAAAGTGAAGCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: LSDRCDSRVTTGEGGLEAVSLNG*ESEAGA
Trigger: GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGAC...AGCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAGTCACATCTGTCACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR CCA 90 bp ATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCCATGGAGCCTCTTCCTaGAAAGTCTGCCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: ITKSLIVSLNGWESEAGAHGASS*KVCLPR
Trigger: TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG...GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR TCA 90 bp GTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTGTGAACACAGCCTaGAAAATGCTGAATATGATA +
Preference number: 2 (lower is better)
Translates to: VSGNSKASLAKAVSSPSSSVNTA*KMLNMI
Trigger: TATCATATTCAGCATTTTTCAGGCTGTGTTCACAGA...AGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598111.7
3UTR CCA 72 bp GGGACCCCACGCCTCTCGCGACTTCGTCTCTTCATCTaGACCCTGAAACTGTTCCCACGGGGGCCACCCAGG +
Preference number: 3 (lower is better)
Translates to: GTPRLSRLRLFI*TLKLFPRGPPR
Trigger: CCTGGGTGGCCCCCGTGGGAACAGTTTCAGGGTCCAGATGAAGAGACGAAGTCGCGAGAGGCGTGGGGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595343.5
3UTR-3UTR CAA 90 bp CCAGCTTCTGCCCCGTGTCCTCTGGGAGCCGAGGCAGTCAGGGGCCTGCCCAACCGGTTCAGGATCCGCTaGAACTTGTTGGAGGCCATC +
Preference number: 3 (lower is better)
Translates to: PASAPCPLGAEAVRGLPNRFRIR*NLLEAI
Trigger: GATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCG...GTTGGGCAGGCCCCTGACTGCCTCGGCTCCCAGAGGACACGGGGCAGAAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595343.5
3UTR CCA 72 bp TGGTCCAGGAAGGTCCGGGAGATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTTTCGGACAGGTGGGTC +
Preference number: 3 (lower is better)
Translates to: WSRKVREMYSDT*FPERLVSDRWV
Trigger: GACCCACCTGTCCGAAACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACATCTCCCGGACCTTCCTGGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598111.7
3UTR TCA 72 bp ACTGGAATCTGTCAGGCCCGTCCCGCTCGGGGTTGGTaGGGTCTGAGGGACTTCGGGGGATCTTGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: TGICQARPARGW*GLRDFGGSCSG
Trigger: ACCAGAGCAAGATCCCCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGGGCCTGACAGATTCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR CCA 72 bp CCTGAAACTGTTCCCACGGGGGCCACCCAGGACTCCTaGACCCAAGTTCCAGATCTGTTCCCCGAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: PETVPTGATQDS*TQVPDLFPECL
Trigger: CAGGCACTCGGGGAACAGATCTGGAACTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAACAGTTTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595343.5
3UTR CCA 72 bp TCTAGCTCCTTGGCCAGTTGCTCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACAGTGGCTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SSSLASCSSWSV*TPKRGTVAEER
Trigger: CCTCTCCTCAGCCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CAA 90 bp GGGTCTGGGCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCAAGTCCCCACTTGTaGGTGTCTTCTAGCTCCTTG +
Preference number: 3 (lower is better)
Translates to: GSGPASGDRSSVSGNSKASSPHL*VSSSSL
Trigger: CAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGA...GGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGCCCAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CAA 90 bp TTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCTCTTAGCTCCGCCACCTaGAACACATCAAGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: LASCSSWSVWTPKRGTVALSSAT*NTSSPH
Trigger: GTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAG...AGCCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR GCA 72 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTaGAGTTCACGCAGGGCTGGCCCTAAGTCCTCTGGT +
Preference number: 3 (lower is better)
Translates to: CQEPKGFTIHCP*SSRRAGPKSSG
Trigger: ACCAGAGGACTTAGGGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599188.5
3UTR CCA 72 bp TTGGTGTCTTCTAGCTCCTTGGCCAGTTGCTCCTCCTaGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCT +
Preference number: 3 (lower is better)
Translates to: LVSSSSLASCSS*SVWTPKRGTVA
Trigger: AGCCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CAA 90 bp TTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCTTCAAGTCCCCACTTGTaGGTGTCTTCTAGCTCCTTG +
Preference number: 3 (lower is better)
Translates to: LASCSSWSVWTPKRGTVASSPHL*VSSSSL
Trigger: CAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGA...AGCCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CAA 90 bp GTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTGGACTTCGGGGGATCTaGCTCTGGTACCACTCTCGA +
Preference number: 3 (lower is better)
Translates to: VSGNSKASLAKAVSSPSSGLRGI*LWYHSR
Trigger: TCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCC...AGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR GCA 72 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTaGCAAGAGCCAAAGGGCTTTACCATCCATTGCCCC +
Preference number: 3 (lower is better)
Translates to: RSHMEPLPGKSA*QEPKGFTIHCP
Trigger: GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
3UTR GCA 72 bp CTCTTTTTATTGTTGTTGTCGTTGCCCAGGCTGGAGTaGAGTGGCGCGACCTCGGCTCACCACAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: LFLLLLSLPRLE*SGATSAHHNLH
Trigger: GTGGAGGTTGTGGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCAACGACAACAACAATAAAAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR-3UTR CAA 90 bp AGCTCCGCCACCTTGAACACATCAAGTCCCCACTTGTTGGTGTCTTCTAGCTCCGTGTCTTCTAGCTCCTaGGCCAGTTGCTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: SSATLNTSSPHLLVSSSSVSSSS*ASCSSW
Trigger: CCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACAC...GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CAA 90 bp CCTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAAGACTCAGTCGCTGCTaGGCGCTGAGGTTCTGGAAG +
Preference number: 3 (lower is better)
Translates to: PPLLPPHPLPLPPPESVQRLSRC*ALRFWK
Trigger: CTTCCAGAACCTCAGCGCCAAGCAGCGACTGAGTCT...TTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CAA 90 bp GCAAGACCTGGATTCGGTCGGAATAGTTGTCCAGGAGGAGGACACCGAGGCTTGAGGAGGTTCATGTGTTaGGACATGTCTGTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: ARPGFGRNSCPGGGHRGLRRFMC*DMSVAS
Trigger: GCTGGCCACAGACATGTCCAAACACATGAACCTCCT...CAAGCCTCGGTGTCCTCCTCCTGGACAACTATTCCGACCGAATCCAGGTCTTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CAA 90 bp CGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAGGAGGTTCATGTGTTaGGACATGTCTGTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: RLQGTGVQCQATPRPLWLRRFMC*DMSVAS
Trigger: GCTGGCCACAGACATGTCCAAACACATGAACCTCCT...TAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CAA 90 bp TCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTGGACTTCGGGGGATCTaGCTCTGGTACCACTCTCGA +
Preference number: 3 (lower is better)
Translates to: SGNSKASLAKAVSSPSSSGLRGI*LWYHSR
Trigger: TCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCC...AGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR-3UTR CAA 90 bp CCCCCACACCTCGTCGGAGTTTATCCAAGTACTAGGATCAGGTTACAGAGGGGACTGACTCCCCACCCTTaGTGCAGGGCTACTACAGAG +
Preference number: 3 (lower is better)
Translates to: PPHLVGVYPSTRIRLQRGLTPHP*CRATTE
Trigger: CTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAG...TCCCCTCTGTAACCTGATCCTAGTACTTGGATAAACTCCGACGAGGTGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR CCA 72 bp TCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCACATaGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGC +
Preference number: 3 (lower is better)
Translates to: SLNGWESEAGAT*SLFLESLPAKS
Trigger: GCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCCACCCATTTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR CAA 90 bp CGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAACATCAAGTCCCCACTaGTTGGTGTCTTCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: RLQGTGVQCQATPRPLWLTSSPH*LVSSSS
Trigger: GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGT...TAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR CCA 72 bp AGAGTGGACCCCAGCCAGGTGCCTCCAATTAGACCCTaGGAGCCACCTATAACTAAGAGCTTGATTGTCTCC +
Preference number: 3 (lower is better)
Translates to: RVDPSQVPPIRP*EPPITKSLIVS
Trigger: GGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGGTCTAATTGGAGGCACCTGGCTGGGGTCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR-3UTR CAA 90 bp TCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTAGCGCCAGCTCTGAGTaGGTGTTAATCAGAAACTGG +
Preference number: 3 (lower is better)
Translates to: SGNSKASLAKAVSSPSSSSASSE*VLIRNW
Trigger: CCAGTTTCTGATTAACACCAACTCAGAGCTGGCGCT...AGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGGGCGGGCGTAGCCAGCAGCACATGCGTGGACTGGGCCACGTCGGCGGCATGTGCTCCTAGGCATTGCTaGCGGGCAAGGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: RAGVASSTCVDWATSAACAPRHC*RARAAT
Trigger: CGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGC...ACATGCCGCCGACGTGGCCCAGTCCACGCATGTGCTGCTGGCTACGCCCGCCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR GCA 90 bp CCCCCACCGAGTGCCGGGTCTGCAGCGTCTCCAACTGATCCAGGCACCAGTCCAATCTCCCCCACCGAGTaGCGGGTCTGCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PPPSAGSAASPTDPGTSPISPTE*RVCSVS
Trigger: GGAGACGCTGCAGACCCGGCACTCGGTGGGGGAGAT...TGGACTGGTGCCTGGATCAGTTGGAGACGCTGCAGACCCGGCACTCGGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR TCA 90 bp GGGTCTGGGCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCGCCCATGTAGGCCACTaGTCCGGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSGPASGDRSSVSGNSKAAHVGH*SGTWAV
Trigger: CACAGCCCATGTCCCGGATCAGTGGCCTACATGGGC...GGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGCCCAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR TCA 90 bp TTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCTCCCGCTCGGGGTTGGTaGGGTCTGAGGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: LASCSSWSVWTPKRGTVAPARGW*GLRDFG
Trigger: CCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGG...AGCCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR TCA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGACAACCGGGACCGCCTaGGACTCGGAGCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLTTGTA*DSELPA
Trigger: GGCCGGGAGCTCCGAGTCTCAGGCGGTCCCGGTTGT...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR GCA 90 bp ATCTGGACCCTGAAACTGTTCCCACGGGGGCCACCCAGGACTCCTGGACCCAAGATCTCCCCCACCGAGTaGCGGGTCTGCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: IWTLKLFPRGPPRTPGPKISPTE*RVCSVS
Trigger: GGAGACGCTGCAGACCCGGCACTCGGTGGGGGAGAT...CTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAACAGTTTCAGGGTCCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595343.5
CDS-3UTR CCA 90 bp TTCCCACGGGGGCCACCCAGGACTCCTGGACCCAAGTTCCAGATCTGTTCCCCGGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: FPRGPPRTPGPKFQICSPGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...CGGGGAACAGATCTGGAACTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595343.5
CDS-3UTR CCA 90 bp CTGTCAGGCCCGTCCCGCTCGGGGTTGGTGAGGTCTGAGGGACTTCGGGGGATCGGATGGTCCACGTCGTaGATGGCGCTTGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSGPSRSGLVRSEGLRGIGWSTS*MALAKR
Trigger: CCTCTTTGCAAGCGCCATCCACGACGTGGACCATCC...GATCCCCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGGGCCTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCAGCGGTCACCTTGGGCAGCTCCACCTCGGTCTGCTGGTCCAGGAAGGTCCGGCAGGTCCTGTGCATCTaGGTGGACCAGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SAVTLGSSTSVCWSRKVRQVLCI*VDQVSP
Trigger: TGGGCTGACCTGGTCCACCCAGATGCACAGGACCTG...CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598111.7
CDS-3UTR CCA 90 bp CTGTCAGGCCCGTCCCGCTCGGGGTTGGTGAGGTCTGAGGGACTTCGGGGGATCCTGCCCCGTGTCCTTTaGCTGCTCCTAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: LSGPSRSGLVRSEGLRGILPRVL*LLLGIA
Trigger: AGCAATGCCTAGGAGCAGCCAAAGGACACGGGGCAG...GATCCCCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGGGCCTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR TCA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCGCGGATGGGCCACCGTaGAGCGCCGCTGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: WSLFLESLPAKSQRALPSADGPP*SAAAGG
Trigger: TCCGCCTGCAGCGGCGCTTCACGGTGGCCCATCCGC...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262805.16
ENST00000599188.5
CDS-3UTR TCA 90 bp CAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCCCGCTCGGGGTTGGTaGGGTCTGAGGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: QEPHGASSWKVCLPRAKGPARGW*GLRDFG
Trigger: CCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGG...CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCCCCGCTCGGGGTTGGTaGGGTCTGAGGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: RSHMEPLPGKSACQEPKGPARGW*GLRDFG
Trigger: CCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGG...GCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTCAGGACTCGTCCCCGTaGGCGGGCGCCGAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFQDSSP*AGAEER
Trigger: ACGCTCCTCGGCGCCCGCTCACGGGGACGAGTCCTG...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp CCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCTGCTGCAAGCCTCTaGCCCTTCGCCGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: PRAKGLYHPLPLQFTQGWPAASL*PFADPQ
Trigger: CTGGGGGTCGGCGAAGGGGCAGAGGCTTGCAGCAGG...CCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCATCGCCAGGACTGCGTaGAGGCTGGACCGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: LPRAKGLYHPLPLQFTQGIARTA*RLDRAP
Trigger: CGGCGCTCGGTCCAGCCTCCACGCAGTCCTGGCGAT...GCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262805.16
CDS-3UTR CCA 90 bp GGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTGCTCCTAGGCATTGCTaGCGGGCAAGGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: GATWSLFLESLPAKSQRAAPRHC*RARAAT
Trigger: CGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGC...AGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCCCCACCGAGTGCCGGGTCTGCAGCGTCTCCAACTGATCCAGGCACCAGTCCACTGGTTTCGGACAGGTaGGTCAACTCCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PPPSAGSAASPTDPGTSPLVSDR*VNSRFR
Trigger: CCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAG...TGGACTGGTGCCTGGATCAGTTGGAGACGCTGCAGACCCGGCACTCGGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR CCA 90 bp CCCCCACCGAGTGCCGGGTCTGCAGCGTCTCCAACTGATCCAGGCACCAGTCCAATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PPPSAGSAASPTDPGTSPMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...TGGACTGGTGCCTGGATCAGTTGGAGACGCTGCAGACCCGGCACTCGGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR CCA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGTCCACCTCGGTCTGCTaGTCCAGGAAGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWSTSVC*SRKVRE
Trigger: CTCCCGGACCTTCCTGGACCAGCAGACCGAGGTGGA...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCCCGGGACATGGGCTGTaGGGCCTCCTCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: LPRAKGLYHPLPLQFTQGPGHGL*GLLSGH
Trigger: GTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGG...GCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGCCAGCAGCACATGCGTaGACTGGGCCACGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: ACQEPKGFTIHCPCSSRRPAAHA*TGPRRR
Trigger: CCGCCGACGTGGCCCAGTCCACGCATGTGCTGCTGG...CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCCCAGCAGCACATGCGTaGACTGGGCCACGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSPAAHA*TGPRRR
Trigger: CCGCCGACGTGGCCCAGTCCACGCATGTGCTGCTGG...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTATGCGGTCCGTCCACTaGCGGTACAGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GATWSLFLESLPAKSQRAMRSVH*RYRGSG
Trigger: GCCGCTGCCCCTGTACCGCCAGTGGACGGACCGCAT...AGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCCTAATGCGGTCCGTCCACTaGCGGTACAGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SQRALPSIAPAVHAGLALMRSVH*RYRGSG
Trigger: GCCGCTGCCCCTGTACCGCCAGTGGACGGACCGCAT...TAGGGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR TCA 90 bp AGCCTCAGGGGCCTCCCTCCCTCTAGGGGGAGTCTGAGGCAGTTTCAGGAATCAGCCCATGTAGGCCACTaGTCCGGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLRGLPPSRGSLRQFQESAHVGH*SGTWAV
Trigger: CACAGCCCATGTCCCGGATCAGTGGCCTACATGGGC...TGATTCCTGAAACTGCCTCAGACTCCCCCTAGAGGGAGGGAGGCCCCTGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCGGACCGAGCGCCGGCTaGGCGGGACCTTTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRGPSAG*AGPFLD
Trigger: GTCCAGAAAAGGTCCCGCGCAGCCGGCGCTCGGTCC...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262805.16
CDS-3UTR GCA 90 bp CAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCTCGCGCCGCTGGCTGTaGGGGACTGGAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: QEPKGFTIHCPCSSRRAGSRRWL*GTGACI
Trigger: TATGCAGGCTCCAGTCCCGCACAGCCAGCGGCGCGA...GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTCGCGCCGCTGGCTGTaGGGGACTGGAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: RSHMEPLPGKSACQEPKGSRRWL*GTGACI
Trigger: TATGCAGGCTCCAGTCCCGCACAGCCAGCGGCGCGA...GCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGTCGCGCCGCTGGCTGTaGGGGACTGGAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: ACQEPKGFTIHCPCSSRRSRRWL*GTGACI
Trigger: TATGCAGGCTCCAGTCCCGCACAGCCAGCGGCGCGA...CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGCAAGGGCCGCCACGTTaGTCCGAACGGTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: ACQEPKGFTIHCPCSSRRQGPPR*SERSAD
Trigger: GTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTG...CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCCAAGGGCCGCCACGTTaGTCCGAACGGTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: LPRAKGLYHPLPLQFTQGQGPPR*SERSAD
Trigger: GTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTG...GCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCGCTGCTCCTAGGCATTaGTGGCGGGCAAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRAAPRH*WRARAA
Trigger: GGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGC...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGCTGCTCCTAGGCATTaGTGGCGGGCAAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CLPRAKGLYHPLPLQFTQAAPRH*WRARAA
Trigger: GGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGC...CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAGCTGCTCCTAGGCATTaGTGGCGGGCAAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPAAPRH*WRARAA
Trigger: GGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGC...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TCTCCTGACTCCCCACCCTTTGTGCAGGGCTACTACAGAGGCAGAAAGCTGGCAGCTGCTCCTAGGCATTaGTGGCGGGCAAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SPDSPPFVQGYYRGRKLAAAPRH*WRARAA
Trigger: GGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGC...TGCCAGCTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp CAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGATCTCCCCCACCGAGTaGCGGGTCTGCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: QEPHGASSWKVCLPRAKGISPTE*RVCSVS
Trigger: GGAGACGCTGCAGACCCGGCACTCGGTGGGGGAGAT...CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TCTCCTGACTCCCCACCCTTTGTGCAGGGCTACTACAGAGGCAGAAAGCTGGCACCTGCTGCAAGCCTCTaGCCCTTCGCCGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPDSPPFVQGYYRGRKLAPAASL*PFADPQ
Trigger: CTGGGGGTCGGCGAAGGGGCAGAGGCTTGCAGCAGG...TGCCAGCTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTGGACTGCGTGGAGGCTaGACCGAGCGCCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVGLRGG*TERRLR
Trigger: GCGCAGCCGGCGCTCGGTCCAGCCTCCACGCAGTCC...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262805.16
CDS-3UTR CCA 90 bp AGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGAAGGACTCGCGCCGCTaGCTGTGCGGGACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SRSHMEPLPGKSACQEPKKDSRR*LCGTGA
Trigger: GGCTCCAGTCCCGCACAGCCAGCGGCGCGAGTCCTT...CTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCAAGGACTCGCGCCGCTaGCTGTGCGGGACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SEAGATWSLFLESLPAKSKDSRR*LCGTGA
Trigger: GGCTCCAGTCCCGCACAGCCAGCGGCGCGAGTCCTT...GCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTGCTCCTAGGCATTGCTaGCGGGCAAGGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLAPRHC*RARAAT
Trigger: CGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGC...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGCCGGGACATGGGCTGTaGGGCCTCCTCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: SRSHMEPLPGKSACQEPKPGHGL*GLLSGH
Trigger: GTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGG...CTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTACCGGGACATGGGCTGTaGGGCCTCCTCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: RLQGTGVQCQATPRPLWLPGHGL*GLLSGH
Trigger: GTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGG...TAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCAAAGCGTGGGACAGTaGCTGAGGAGAGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWQSVGQ*LRRGWH
Trigger: GTGCCAGCCTCTCCTCAGCCACTGTCCCACGCTTTG...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGCCAGCAGCACATGCGTaGACTGGGCCACGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: CLPRAKGLYHPLPLQFTQPAAHA*TGPRRR
Trigger: CCGCCGACGTGGCCCAGTCCACGCATGTGCTGCTGG...CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCCCAGCAGCACATGCGTaGACTGGGCCACGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRPAAHA*TGPRRR
Trigger: CCGCCGACGTGGCCCAGTCCACGCATGTGCTGCTGG...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGGGTCCACGTCGTGGATaGCGCTTGCAAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWGPRRG*RLQRGQ
Trigger: CTGCCCTCTTTGCAAGCGCCATCCACGACGTGGACC...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CATCTCCCCCACCGAGTGCCGGGTCTGCAGCGTCTCCAACTGATCCAGGCACCAGCCACCCAGGACTCCTaGACCCAAGTTCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: HLPHRVPGLQRLQLIQAPATQDS*TQVPDL
Trigger: CAGATCTGGAACTTGGGTCCAGGAGTCCTGGGTGGC...TGGTGCCTGGATCAGTTGGAGACGCTGCAGACCCGGCACTCGGTGGGGGAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR CCA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTGCTGTTGGATGCGGATaGGGCGCCGGGGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSAVGCG*GAGVAA
Trigger: GGCGGCAACCCCGGCGCCCCATCCGCATCCAACAGC...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp CCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGGCCCATGTAGGCCACTaGTCCGGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PRAKGLYHPLPLQFTQGWAHVGH*SGTWAV
Trigger: CACAGCCCATGTCCCGGATCAGTGGCCTACATGGGC...CCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp ACCTCGGTCTGCTGGTCCAGGAAGGTCCGGGAGATGTACTCGGACACCTGGTTCAAGCCCACAGCCAGGTaGTGGTTCTCCAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: TSVCWSRKVREMYSDTWFKPTAR*WFSSTE
Trigger: CTCGGTGCTGGAGAACCATCACCTGGCTGTGGGCTT...GAACCAGGTGTCCGAGTACATCTCCCGGACCTTCCTGGACCAGCAGACCGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598111.7
CDS-3UTR TCA 90 bp GTCTGCTGGTCCAGGAAGGTCCGGGAGATGTACTCGGACACCTGGTTCCCGGAGGTCGCTGCTTGGCGCTaGGGTTCTGGAAGATATCGC +
Preference number: 4 (lower is better)
Translates to: VCWSRKVREMYSDTWFPEVAAWR*GSGRYR
Trigger: GCGATATCTTCCAGAACCTCAGCGCCAAGCAGCGAC...CTCCGGGAACCAGGTGTCCGAGTACATCTCCCGGACCTTCCTGGACCAGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598111.7
CDS-3UTR TCA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCCCGCTCGGGGTTGGTaGGGTCTGAGGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLPARGW*GLRDFG
Trigger: CCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGG...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCCCCGCTCGGGGTTGGTaGGGTCTGAGGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPPARGW*GLRDFG
Trigger: CCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGG...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TCTCCTGACTCCCCACCCTTTGTGCAGGGCTACTACAGAGGCAGAAAGCTGGCACAAGGGCCGCCACGTTaGTCCGAACGGTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: SPDSPPFVQGYYRGRKLAQGPPR*SERSAD
Trigger: GTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTG...TGCCAGCTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp GTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTGCTGCTCCTAGGCATTaGTGGCGGGCAAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VSGNSKASLAKAVSSPSSAAPRH*WRARAA
Trigger: GGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGC...AGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR GCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAATCTCCCCCACCGAGTaGCGGGTCTGCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPISPTE*RVCSVS
Trigger: GGAGACGCTGCAGACCCGGCACTCGGTGGGGGAGAT...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGAGCTCCACCTCGGTCTaGTGGTCCAGGAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRSSTSV*WSRKVR
Trigger: CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCT...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCATGGGGCGCCGGGGTTaGCGCCACAGGTGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPMGRRG*RHRCFG
Trigger: CCCGAAGCACCTGTGGCGGCAACCCCGGCGCCCCAT...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGCCAGGTCAAAGCGCCTaGAGGAGGAAACGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRPGQSA*RRKRAR
Trigger: CCTGGCCCGTTTCCTCCTGCAGGCGCTTTGACCTGG...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGTCAAAGCACAGCGGATaGGCCACCGTGAAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: QEPHGASSWKVCLPRAKGSKHSG*ATVKRR
Trigger: GCGGCGCTTCACGGTGGCCCATCCGCTGTGCTTTGA...CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262805.16
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGCTGGCTGTGCGGGACTaGAGCCTGCATAATCCGGCC +
Preference number: 4 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLLAVRD*SLHNPA
Trigger: GGCCGGATTATGCAGGCTCCAGTCCCGCACAGCCAG...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCAAAGGACTCGCGCCGCTaGCTGTGCGGGACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPKDSRR*LCGTGA
Trigger: GGCTCCAGTCCCGCACAGCCAGCGGCGCGAGTCCTT...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGAACGGTCCGCAGACTaGCCAGGACCTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLERSAD*PGPGQR
Trigger: CCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTC...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCGCTCCTAGGCATTGCTaGCGGGCAAGGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPAPRHC*RARAAT
Trigger: CGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGC...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTGCTCCTAGGCATTGCTaGCGGGCAAGGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFAPRHC*RARAAT
Trigger: CGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGC...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCTGGTTTCGGACAGGTaGGTCAACTCCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWLVSDR*VNSRFR
Trigger: CCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAG...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGTCCACCTCGGTCTGCTaGTCCAGGAAGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PAKSQRALPSIAPAVHAGSTSVC*SRKVRE
Trigger: CTCCCGGACCTTCCTGGACCAGCAGACCGAGGTGGA...CCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGATGCGGTCCGTCCACTaGCGGTACAGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLMRSVH*RYRGSG
Trigger: GCCGCTGCCCCTGTACCGCCAGTGGACGGACCGCAT...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATGCGGTCCGTCCACTaGCGGTACAGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HMEPLPGKSACQEPKGFTMRSVH*RYRGSG
Trigger: GCCGCTGCCCCTGTACCGCCAGTGGACGGACCGCAT...GGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGATCCCCGTCCACGAGCTaGGTCGGCACCCCGCGTAGG +
Preference number: 4 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRSPSTS*VGTPRR
Trigger: CCTACGCGGGGTGCCGACCCAGCTCGTGGACGGGGA...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR CCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCCCAGGGCCGGGAGTaGAGGCGACAGCGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPAQGRE*RRQRGA
Trigger: AGCTCCTCGCTGTCGCCTCCACTCCCGGCCCTGGGC...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCGCTCTGGTCATGCTGTaGCGGCCGCGAGAGCGACTC +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRALVML*RPRERL
Trigger: GAGTCGCTCTCGCGGCCGCCACAGCATGACCAGAGC...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGGTGCTTCGGGGCTCTaGTCATGCTGTGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALGASGL*SCCGGR
Trigger: GCGGCCGCCACAGCATGACCAGAGCCCCGAAGCACC...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
3UTR CAA 72 bp TCAAACTGGAATCTGTCAGGCCCGTCCCGCTCGGGGTaGGTGAGGTCTGAGGGACTTCGGGGGATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SNWNLSGPSRSG*VRSEGLRGILL
Trigger: GAGCAAGATCCCCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGGGCCTGACAGATTCCAGTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR TCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCATCACCAAAAGCTTCCTaGAGAGCCCGGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPSPKAS*RARGSR
Trigger: GCGGCTCCCCCGGGCTCTTCAGGAAGCTTTTGGTGA...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262805.16
CDS-3UTR TCA 90 bp AGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCGCCCATGTAGGCCACTaGTCCGGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SEAGATWSLFLESLPAKSAHVGH*SGTWAV
Trigger: CACAGCCCATGTCCCGGATCAGTGGCCTACATGGGC...GCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCCAGCACCATGTCAATaGCCATCCTGCGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWPAPCQ*PSCADS
Trigger: TGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGG...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR TCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTCCCGCTCGGGGTTGGTaGGGTCTGAGGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPPARGW*GLRDFG
Trigger: CCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGG...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp AGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACCCGCGCCGGAGGTGCTaGAGCGGTAGAAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SLPAKSQRALPSIAPAVHPRRRC*SGRRWN
Trigger: GTTCCACCTTCTACCGCTTCAGCACCTCCGGCGCGG...GTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGTCGCGCCGCTGGCTGTaGGGGACTGGAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLSRRWL*GTGACI
Trigger: TATGCAGGCTCCAGTCCCGCACAGCCAGCGGCGCGA...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCACAAGGGCCGCCACGTTaGTCCGAACGGTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPQGPPR*SERSAD
Trigger: GTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTG...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACAAGGGCCGCCACGTTaGTCCGAACGGTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALQGPPR*SERSAD
Trigger: GTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTG...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTGCTGCTCCTAGGCATTaGTGGCGGGCAAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVAAPRH*WRARAA
Trigger: GGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGC...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCTGCCCCGTGTCCTCTaGAGGAGGGAGCTGATTGCT +
Preference number: 4 (lower is better)
Translates to: PRAKGLYHPLPLQFTQGWLPRVL*RRELIA
Trigger: AGCAATCAGCTCCCTCCTGCAGAGGACACGGGGCAG...CCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCCTGCCCCGTGTCCTCTaGAGGAGGGAGCTGATTGCT +
Preference number: 4 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSLPRVL*RRELIA
Trigger: AGCAATCAGCTCCCTCCTGCAGAGGACACGGGGCAG...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp CACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCTCCCCCACCGAGTaGCGGGTCTGCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: HMEPLPGKSACQEPKGFTISPTE*RVCSVS
Trigger: GGAGACGCTGCAGACCCGGCACTCGGTGGGGGAGAT...GGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCAATCTCCCCCACCGAGTaGCGGGTCTGCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPISPTE*RVCSVS
Trigger: GGAGACGCTGCAGACCCGGCACTCGGTGGGGGAGAT...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAAGCTCCACCTCGGTCTaGTGGTCCAGGAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHASSTSV*WSRKVR
Trigger: CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCT...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCAGCTCCTTGGCCAGTTaGTCCTCCTGGTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: AGFRGQEFSVRQLQGLFGSSLAS*SSWSVW
Trigger: CCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCT...GCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCCGCAGACTCAGTCGCTaGTTGGCGCTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RSHMEPLPGKSACQEPKGRRLSR*LALRFW
Trigger: CCAGAACCTCAGCGCCAAGCAGCGACTGAGTCTGCG...GCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGCGCAGACTCAGTCGCTaGTTGGCGCTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRRRLSR*LALRFW
Trigger: CCAGAACCTCAGCGCCAAGCAGCGACTGAGTCTGCG...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCGTCCAGCAGGTCCTGTaGATCTGGGTGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSVQQVL*IWVDQV
Trigger: GACCTGGTCCACCCAGATGCACAGGACCTGCTGGAC...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCGTCCAGCAGGTCCTGTaGATCTGGGTGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: KSQRALPSIAPAVHAGLAVQQVL*IWVDQV
Trigger: GACCTGGTCCACCCAGATGCACAGGACCTGCTGGAC...GGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGACCATCCATTGCCCCTaGAGTTCACGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRTIHCP*SSRRAG
Trigger: GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGT...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCACCATCCATTGCCCCTaGAGTTCACGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QEPKGFTIHCPCSSRRAGTIHCP*SSRRAG
Trigger: GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGT...GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCACCATCCATTGCCCCTaGAGTTCACGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSHMEPLPGKSACQEPKGTIHCP*SSRRAG
Trigger: GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGT...GCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCTCGGGGCTCTGGTCATaGTGTGGCGGCCGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTISGLWS*CGGRES
Trigger: GCTCTCGCGGCCGCCACAGCATGACCAGAGCCCCGA...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGTCGCCCAGGCTGGAGTaGAGTGGCATGATGTCGGCT +
Preference number: 4 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLSPRLE*SGMMSA
Trigger: AGCCGACATCATGCCACTGCACTCCAGCCTGGGCGA...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp AGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCACGATCTCGGCTCACTaGAAGCCCCGCCTCCCGGAT +
Preference number: 4 (lower is better)
Translates to: SEAGATWSLFLESLPAKSTISAH*KPRLPD
Trigger: ATCCGGGAGGCGGGGCTTGCAGTGAGCCGAGATCGT...GCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAAAGGACTCGCGCCGCTaGCTGTGCGGGACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSKDSRR*LCGTGA
Trigger: GGCTCCAGTCCCGCACAGCCAGCGGCGCGAGTCCTT...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTAAGGACTCGCGCCGCTaGCTGTGCGGGACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPKDSRR*LCGTGA
Trigger: GGCTCCAGTCCCGCACAGCCAGCGGCGCGAGTCCTT...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGTCCGAGACATGGCCTTaGGCGAGAGTTCATAGTCGC +
Preference number: 4 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWSETWP*ARVHSR
Trigger: GCGACTATGAACTCTCGCCCAAGGCCATGTCTCGGA...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGAACGGTCCGCAGACTaGCCAGGACCTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SRSHMEPLPGKSACQEPKERSAD*PGPGQR
Trigger: CCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTC...CTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGCGACGGGTCCCTGCTTaGCTGCTCCTAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLRRVPA*LLLGIA
Trigger: AGCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCG...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CCTCTCGCGACTTCGTCTCTTCATCTGGACCCTGAAACTGTTCCCACGGGGGCCCTGGTTTCGGACAGGTaGGTCAACTCCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PLATSSLHLDPETVPTGALVSDR*VNSRFR
Trigger: CCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAG...GGCCCCCGTGGGAACAGTTTCAGGGTCCAGATGAAGAGACGAAGTCGCGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595343.5
CDS-3UTR CCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHAGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CQEPKGFTIHCPCSSRRAGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...AGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCCTCAGGGGCCTCCCTCCCTCTAGGGGGAGTCTGAGGCAGTTTCAGGAATCAATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SLRGLPPSRGSLRQFQESMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...TGATTCCTGAAACTGCCTCAGACTCCCCCTAGAGGGAGGGAGGCCCCTGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCATCCACCTCGGTCTGCTaGTCCAGGAAGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPSTSVC*SRKVRE
Trigger: CTCCCGGACCTTCCTGGACCAGCAGACCGAGGTGGA...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCACCTCAGCGGTCACCTTaGGCAGCTCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPPQRSP*AAPPRS
Trigger: AGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGG...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACCGGGACATGGGCTGTaGGGCCTCCTCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSPGHGL*GLLSGH
Trigger: GTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGG...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCCGGGACATGGGCTGTaGGGCCTCCTCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHPGHGL*GLLSGH
Trigger: GTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGG...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCACCGGGACATGGGCTGTaGGGCCTCCTCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPPGHGL*GLLSGH
Trigger: GTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGG...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCGAGAGGCTGGCACTGTaGCAGAGCCCATGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: KSQRALPSIAPAVHAGLAERLAL*QSPCRP
Trigger: TGGCCTACATGGGCTCTGCCACAGTGCCAGCCTCTC...GGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGTGGCTGAGGAGAGGCTaGCACTGTGGCAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: QEPHGASSWKVCLPRAKGWLRRG*HCGRAH
Trigger: ATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCA...CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGCACATGCGTGGACTaGGCCACGTCGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: PGKSACQEPKGFTIHCPCSTCVD*ATSAAC
Trigger: ACATGCCGCCGACGTGGCCCAGTCCACGCATGTGCT...GCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCAGCAGCACATGCGTaGACTGGGCCACGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: GVQCQATPRPLWLKLSLPPAAHA*TGPRRR
Trigger: CCGCCGACGTGGCCCAGTCCACGCATGTGCTGCTGG...GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR CCA 90 bp CAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGGGTCCACGTCGTGGATaGCGCTTGCAAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QEPHGASSWKVCLPRAKGGPRRG*RLQRGQ
Trigger: CTGCCCTCTTTGCAAGCGCCATCCACGACGTGGACC...CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCATGCGGTCCGTCCACTaGCGGTACAGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPMRSVH*RYRGSG
Trigger: GCCGCTGCCCCTGTACCGCCAGTGGACGGACCGCAT...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTATGCGGTCCGTCCACTaGCGGTACAGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPMRSVH*RYRGSG
Trigger: GCCGCTGCCCCTGTACCGCCAGTGGACGGACCGCAT...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCAGGTCCTGTGCATCTaGGTGGACCAGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QEPHGASSWKVCLPRAKGQVLCI*VDQVSP
Trigger: TGGGCTGACCTGGTCCACCCAGATGCACAGGACCTG...CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCAGCGGTCACCTTGGGCAGCTCCACCTCGGTCTGCTGGTCCAGGAAGGTCCGGACTCCAAGGCCTCTTTaGCTAAAGCTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SAVTLGSSTSVCWSRKVRTPRPL*LKLSLP
Trigger: GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGT...CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598111.7
CDS-3UTR CCA 90 bp CCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGAGTCTAGGGTCAGAGTaGACCCCAGCCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PRAKGLYHPLPLQFTQGWSLGSE*TPARCL
Trigger: GAGGCACCTGGCTGGGGTCCACTCTGACCCTAGACT...CCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTGGGCCAGTGTCCGGCTaGTCCCGGCCAAGACTTTTG +
Preference number: 4 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLGPVSG*SRPRLL
Trigger: CAAAAGTCTTGGCCGGGACCAGCCGGACACTGGCCC...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR CCA 90 bp GGTCAACTCCCGGTTCAGGATCCGCTTGAACTTGTTGGAGGCCATCTCCCCCACTTGCAGGGGCGGGGTTaGCTGCTCCTAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: GQLPVQDPLELVGGHLPHLQGRG*LLLGIA
Trigger: AGCAATGCCTAGGAGCAGCCAACCCCGCCCCTGCAA...GTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCGGGAGTTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593594.1
CDS-3UTR CCA 90 bp CCTGAAACTGTTCCCACGGGGGCCACCCAGGACTCCTGGACCCAAGTTCCAGATGCCACCCAGGACTCCTaGACCCAAGTTCCAGATCTG +
Preference number: 4 (lower is better)
Translates to: PETVPTGATQDSWTQVPDATQDS*TQVPDL
Trigger: CAGATCTGGAACTTGGGTCCAGGAGTCCTGGGTGGC...ATCTGGAACTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAACAGTTTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595343.5
CDS-3UTR CCA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGGCTCTGGTCATGCTGTaGCGGCCGCGAGAGCGACTC +
Preference number: 4 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQALVML*RPRERL
Trigger: GAGTCGCTCTCGCGGCCGCCACAGCATGACCAGAGC...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCGGTGCTTCGGGGCTCTaGTCATGCTGTGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPGASGL*SCCGGR
Trigger: GCGGCCGCCACAGCATGACCAGAGCCCCGAAGCACC...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGGCCCATGTAGGCCACTaGTCCGGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQAHVGH*SGTWAV
Trigger: CACAGCCCATGTCCCGGATCAGTGGCCTACATGGGC...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACGCCCATGTAGGCCACTaGTCCGGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYAHVGH*SGTWAV
Trigger: CACAGCCCATGTCCCGGATCAGTGGCCTACATGGGC...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGTTAGCTCCGCCACCTTaGACACATCAAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWLAPPP*THQVPT
Trigger: AGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAA...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR TCA 90 bp CAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGGTCGCTGCTTGGCGCTaGGGTTCTGGAAGATATCGC +
Preference number: 4 (lower is better)
Translates to: QEPHGASSWKVCLPRAKGVAAWR*GSGRYR
Trigger: GCGATATCTTCCAGAACCTCAGCGCCAAGCAGCGAC...CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCACCGCGCCGGAGGTGCTaGAGCGGTAGAAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPPRRRC*SGRRWN
Trigger: GTTCCACCTTCTACCGCTTCAGCACCTCCGGCGCGG...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCTGCATCGCCAGGACTaGGTGGAGGCTGGACCGAGC +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHLHRQD*VEAGPS
Trigger: GCTCGGTCCAGCCTCCACGCAGTCCTGGCGATGCAG...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262805.16
CDS-3UTR GCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCTCGCGCCGCTGGCTGTaGGGGACTGGAGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPSRRWL*GTGACI
Trigger: TATGCAGGCTCCAGTCCCGCACAGCCAGCGGCGCGA...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTCTGCCCCGTGTCCTCTaGAGGAGGGAGCTGATTGCT +
Preference number: 4 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLLPRVL*RRELIA
Trigger: AGCAATCAGCTCCCTCCTGCAGAGGACACGGGGCAG...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCATCTCCCCCACCGAGTaGCGGGTCTGCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPISPTE*RVCSVS
Trigger: GGAGACGCTGCAGACCCGGCACTCGGTGGGGGAGAT...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCAGCTCCACCTCGGTCTaGTGGTCCAGGAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: WSLFLESLPAKSQRALPSSSTSV*WSRKVR
Trigger: CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCT...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTAGCTCCACCTCGGTCTaGTGGTCCAGGAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: VSGNSKASLAKAVSSPSSSSTSV*WSRKVR
Trigger: CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCT...AGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TTGGTGTCTTCTAGCTCCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCACGCAGACTCAGTCGCTaGTTGGCGCTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LVSSSSLASCSSWSVWTPRRLSR*LALRFW
Trigger: CCAGAACCTCAGCGCCAAGCAGCGACTGAGTCTGCG...TGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GTGGCCAGCACCATGTCAATGACCATCCTGCGCAGACTCAGTCGCTGCTTGGCGCAGTGCACCAGGTTCTaGAAGACCTGGATTCGGTCG +
Preference number: 4 (lower is better)
Translates to: VASTMSMTILRRLSRCLAQCTRF*KTWIRS
Trigger: CGACCGAATCCAGGTCTTGCAGAACCTGGTGCACTG...CGCCAAGCAGCGACTGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGGCCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCTCAGATCAGCACAGTaGACCAGGTTCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWLRSAQ*TRFCKT
Trigger: GGTCTTGCAGAACCTGGTGCACTGTGCTGATCTGAG...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGTCCAGCAGGTCCTGTaGATCTGGGTGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHAVQQVL*IWVDQV
Trigger: GACCTGGTCCACCCAGATGCACAGGACCTGCTGGAC...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCGGCTTTACCATCCATTaGCCCTGCAGTTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: AGFRGQEFSVRQLQGLFGGFTIH*PCSSRR
Trigger: CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCC...GCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR GCA 90 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTTGGACCCCAGCCAGGTaGCTCCAATTAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: CQEPKGFTIHCPCSSRRAWTPAR*LQLDPG
Trigger: CCCAGGGTCTAATTGGAGGCACCTGGCTGGGGTCCA...AGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTGGACCCCAGCCAGGTaGCTCCAATTAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLWTPAR*LQLDPG
Trigger: CCCAGGGTCTAATTGGAGGCACCTGGCTGGGGTCCA...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCACCGAGGAGCTGTCGATaGCCAGATGGTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHAPRSCR*PDGAEG
Trigger: CCCTTCAGCACCATCTGGGCATCGACAGCTCCTCGG...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594465.7
CDS-3UTR GCA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTTCGGGGCTCTGGTCATaGTGTGGCGGCCGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: SLFLESLPAKSQRALPSISGLWS*CGGRES
Trigger: GCTCTCGCGGCCGCCACAGCATGACCAGAGCCCCGA...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TTAAGTGACAGATGTGACTCAAGAGTGACCACTGGAGAGGGTGGACTAGAGGCTATGGGGCGCCGGGGTTaGCGCCACAGGTGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LSDRCDSRVTTGEGGLEAMGRRG*RHRCFG
Trigger: CCCGAAGCACCTGTGGCGGCAACCCCGGCGCCCCAT...AGCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAGTCACATCTGTCACTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCAGAAGCGCTGTTGGATaGGGATGGGGCGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: WSLFLESLPAKSQRALPSRSAVG*GWGAGV
Trigger: AACCCCGGCGCCCCATCCGCATCCAACAGCGCTTCT...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTTCAAAGCACAGCGGATaGGCCACCGTGAAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFSKHSG*ATVKRR
Trigger: GCGGCGCTTCACGGTGGCCCATCCGCTGTGCTTTGA...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262805.16
ENST00000599188.5
CDS-3UTR CCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGAGACTGGCCAGGACCTaGGCAAAGGGCGTCACAATC +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRRLART*AKGVTI
Trigger: GATTGTGACGCCCTTTGCCCAGGTCCTGGCCAGTCT...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCGAACGGTCCGCAGACTaGCCAGGACCTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: WSLFLESLPAKSQRALPSERSAD*PGPGQR
Trigger: CCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTC...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTGAACGGTCCGCAGACTaGCCAGGACCTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFERSAD*PGPGQR
Trigger: CCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTC...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCCGACGGGTCCCTGCTTaGCTGCTCCTAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRRRVPA*LLLGIA
Trigger: AGCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCG...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SLPAKSQRALPSIAPAVHGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...GTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: ACQEPKGFTIHCPCSSRRMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGTCAACTCCCGGTTCAGGATCCGCTTGAACTTGTTGGAGGCCATCTCCCCCACATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GQLPVQDPLELVGGHLPHMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...GTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCGGGAGTTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR CCA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGTCCACCTCGGTCTGCTaGTCCAGGAAGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLSTSVC*SRKVRE
Trigger: CTCCCGGACCTTCCTGGACCAGCAGACCGAGGTGGA...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTCCACCTCGGTCTGCTaGTCCAGGAAGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQSTSVC*SRKVRE
Trigger: CTCCCGGACCTTCCTGGACCAGCAGACCGAGGTGGA...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCCTCAGCGGTCACCTTaGGCAGCTCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYPQRSP*AAPPRS
Trigger: AGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGG...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCCCTCAGCGGTCACCTTaGGCAGCTCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPPQRSP*AAPPRS
Trigger: AGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGG...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTCCTCAGCGGTCACCTTaGGCAGCTCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: VSGNSKASLAKAVSSPSSPQRSP*AAPPRS
Trigger: AGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGG...AGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAACCTCAGCGGTCACCTTaGGCAGCTCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: KQEPHGASSWKVCLPRAKPQRSP*AAPPRS
Trigger: AGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGG...TTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGAGAGGCTGGCACTGTaGCAGAGCCCATGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: CLPRAKGLYHPLPLQFTQERLAL*QSPCRP
Trigger: TGGCCTACATGGGCTCTGCCACAGTGCCAGCCTCTC...CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCTGGCTGAGGAGAGGCTaGCACTGTGGCAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRWLRRG*HCGRAH
Trigger: ATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCA...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGTCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: ACQEPKGFTIHCPCSSRRSSWSV*TPKRGT
Trigger: TGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGA...CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCTCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: QEPKGFTIHCPCSSRRAGSSWSV*TPKRGT
Trigger: TGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGA...GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGGTCTGGGCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCCAAGTCCCCACTTGTTaGTGTCTTCTAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSGPASGDRSSVSGNSKAQVPTC*CLLAPW
Trigger: CCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTG...GGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGCCCAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGAGCACATGCGTGGACTaGGCCACGTCGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQSTCVD*ATSAAC
Trigger: ACATGCCGCCGACGTGGCCCAGTCCACGCATGTGCT...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCAGCACATGCGTGGACTaGGCCACGTCGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPSTCVD*ATSAAC
Trigger: ACATGCCGCCGACGTGGCCCAGTCCACGCATGTGCT...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGTCCACGTCGTGGATaGCGCTTGCAAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLPRAKGLYHPLPLQFTQGPRRG*RLQRGQ
Trigger: CTGCCCTCTTTGCAAGCGCCATCCACGACGTGGACC...CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAGGTCCACGTCGTGGATaGCGCTTGCAAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPGPRRG*RLQRGQ
Trigger: CTGCCCTCTTTGCAAGCGCCATCCACGACGTGGACC...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTGGATGGTCCACGTCGTaGATGGCGCTTGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GATWSLFLESLPAKSQRAGWSTS*MALAKR
Trigger: CCTCTTTGCAAGCGCCATCCACGACGTGGACCATCC...AGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAAATGCGGTCCGTCCACTaGCGGTACAGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LLFFLLILFLCLLQSQFKMRSVH*RYRGSG
Trigger: GCCGCTGCCCCTGTACCGCCAGTGGACGGACCGCAT...TTTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GACAGCACCTCTCCTCACAGGGATAGAAGCCCAGGAGAAAGACACCAGGGCATCCAGGTCCTGTGCATCTaGGTGGACCAGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: DSTSPHRDRSPGERHQGIQVLCI*VDQVSP
Trigger: TGGGCTGACCTGGTCCACCCAGATGCACAGGACCTG...GATGCCCTGGTGTCTTTCTCCTGGGCTTCTATCCCTGTGAGGAGAGGTGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGAGTCTAGGGTCAGAGTaGACCCCAGCCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SRSHMEPLPGKSACQEPKSLGSE*TPARCL
Trigger: GAGGCACCTGGCTGGGGTCCACTCTGACCCTAGACT...CTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGGACCACTGGAGAGGGTaGACTAGAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PAKSQRALPSIAPAVHAGDHWRG*TRGSSR
Trigger: TCTGCTGGAGCCTCTAGTCCACCCTCTCCAGTGGTC...CCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCCTGCCCCGTGTCCTTTaGCTGCTCCTAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: KSQRALPSIAPAVHAGLALPRVL*LLLGIA
Trigger: AGCAATGCCTAGGAGCAGCCAAAGGACACGGGGCAG...GGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539010.5
ENST00000599188.5
CDS-3UTR CCA 90 bp CCCCCACCGAGTGCCGGGTCTGCAGCGTCTCCAACTGATCCAGGCACCAGTCCACTTCGTCTCTTCATCTaGACCCTGAAACTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PPPSAGSAASPTDPGTSPLRLFI*TLKLFP
Trigger: TGGGAACAGTTTCAGGGTCCAGATGAAGAGACGAAG...TGGACTGGTGCCTGGATCAGTTGGAGACGCTGCAGACCCGGCACTCGGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR CCA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAGCCCAGGGCCGGGAGTaGAGGCGACAGCGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PWEPPITKSLIVSLNGWEAQGRE*RRQRGA
Trigger: AGCTCCTCGCTGTCGCCTCCACTCCCGGCCCTGGGC...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AGACCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGCTGTTGGATGCGGATaGGGCGCCGGGGTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RPWEPPITKSLIVSLNGWAVGCG*GAGVAA
Trigger: GGCGGCAACCCCGGCGCCCCATCCGCATCCAACAGC...CCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCGAGATGCCTTTGGGATaGTCTCCTGACTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LPRAKGLYHPLPLQFTQGEMPLG*SPDSPP
Trigger: GGGTGGGGAGTCAGGAGACCATCCCAAAGGCATCTC...GCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR TCA 90 bp CTTCAGCAGGTCCCGCTCCTGAAAAATGCTGAATATGATAGCTGTGAGGGGCCGTCACCAAAAGCTTCCTaGAGAGCCCGGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LQQVPLLKNAEYDSCEGPSPKAS*RARGSR
Trigger: GCGGCTCCCCCGGGCTCTTCAGGAAGCTTTTGGTGA...CGGCCCCTCACAGCTATCATATTCAGCATTTTTCAGGAGCGGGACCTGCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR TCA 90 bp GGATGGTCTCCTGACTCCCCACCCTTTGTGCAGGGCTACTACAGAGGCAGAAAGGAGCTGATTGCTGGATaGAGGGTTTCCGACGGGTCC +
Preference number: 4 (lower is better)
Translates to: GWSPDSPPFVQGYYRGRKELIAG*RVSDGS
Trigger: GGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTC...CTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGACCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR TCA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGGCCCATGTAGGCCACTaGTCCGGGACATGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLAHVGH*SGTWAV
Trigger: CACAGCCCATGTCCCGGATCAGTGGCCTACATGGGC...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp CCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCAGCACCATGTCAATaGCCATCCTGCGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: PRAKGLYHPLPLQFTQGWPAPCQ*PSCADS
Trigger: TGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGG...CCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp ATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCCAGGACTCGTCCCCGTaGGCGGGCGCCGAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: ITKSLIVSLNGWESEAGAQDSSP*AGAEER
Trigger: ACGCTCCTCGGCGCCCGCTCACGGGGACGAGTCCTG...GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGATGCGGGACTGGAGCCTaGATAATCCGGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRCGTGA*IIRPRP
Trigger: TGGCCTGGGCCGGATTATGCAGGCTCCAGTCCCGCA...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCTTTCCGACGGGTCCCTaGTTGGCTGCTCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRFPTGP*LAAPRH
Trigger: ATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGGAAA...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAAGCTCCACCTCGGTCTaGTGGTCCAGGAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRSSTSV*WSRKVR
Trigger: CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCT...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAGCTCCACCTCGGTCTaGTGGTCCAGGAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFSSTSV*WSRKVR
Trigger: CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCT...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAAGCTCCACCTCGGTCTaGTGGTCCAGGAAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSSSTSV*WSRKVR
Trigger: CCGGACCTTCCTGGACCAGCAGACCGAGGTGGAGCT...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGAGCTCCTTGGCCAGTTaGTCCTCCTGGTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SRSHMEPLPGKSACQEPKSSLAS*SSWSVW
Trigger: CCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCT...CTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGTCGTGGATGGCGCTTaGAAAGAGGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SRSHMEPLPGKSACQEPKVVDGA*KEGSQD
Trigger: ATCCTGGCTGCCCTCTTTGCAAGCGCCATCCACGAC...CTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGCAGTGCACCAGGTTCTaGAAGACCTGGATTCGGTCG +
Preference number: 4 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLQCTRF*KTWIRS
Trigger: CGACCGAATCCAGGTCTTGCAGAACCTGGTGCACTG...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCCAGTGCACCAGGTTCTaGAAGACCTGGATTCGGTCG +
Preference number: 4 (lower is better)
Translates to: LPRAKGLYHPLPLQFTQGQCTRF*KTWIRS
Trigger: CGACCGAATCCAGGTCTTGCAGAACCTGGTGCACTG...GCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTCAGTGCACCAGGTTCTaGAAGACCTGGATTCGGTCG +
Preference number: 4 (lower is better)
Translates to: GATWSLFLESLPAKSQRAQCTRF*KTWIRS
Trigger: CGACCGAATCCAGGTCTTGCAGAACCTGGTGCACTG...AGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGCTCTCAGATCAGCACAGTaGACCAGGTTCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: LASCSSWSVWTPKRGTVALRSAQ*TRFCKT
Trigger: GGTCTTGCAGAACCTGGTGCACTGTGCTGATCTGAG...AGCCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTGTCCAGCAGGTCCTGTaGATCTGGGTGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSVQQVL*IWVDQV
Trigger: GACCTGGTCCACCCAGATGCACAGGACCTGCTGGAC...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTCCAGCAGGTCCTGTaGATCTGGGTGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: LESLPAKSQRALPSIAPAVQQVL*IWVDQV
Trigger: GACCTGGTCCACCCAGATGCACAGGACCTGCTGGAC...TGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GTGGCCAGCACCATGTCAATGACCATCCTGCGCAGACTCAGTCGCTGCTTGGCGGACTTCGGGGGATCTTaGTCTGGTACCACTCTCGAT +
Preference number: 4 (lower is better)
Translates to: VASTMSMTILRRLSRCLADFGGS*SGTTLD
Trigger: ATCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTC...CGCCAAGCAGCGACTGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCACCATCCATTGCCCCTaGAGTTCACGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPTIHCP*SSRRAG
Trigger: GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGT...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGGCTTTACCATCCATTaGCCCTGCAGTTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRGFTIH*PCSSRR
Trigger: CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCC...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGTGGACCCCAGCCAGGTaGCTCCAATTAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLWTPAR*LQLDPG
Trigger: CCCAGGGTCTAATTGGAGGCACCTGGCTGGGGTCCA...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGCGACTCAACCTGCTaGAAGCCTCTGCCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFSDSTC*KPLPLR
Trigger: GCGAAGGGGCAGAGGCTTGCAGCAGGTTGAGTCGCT...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTAGCGACTCAACCTGCTaGAAGCCTCTGCCCCTTCGC +
Preference number: 4 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSSDSTC*KPLPLR
Trigger: GCGAAGGGGCAGAGGCTTGCAGCAGGTTGAGTCGCT...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCGAGAGCGACTCAACCTaGTGCAAGCCTCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRESDST*CKPLPL
Trigger: AAGGGGCAGAGGCTTGCAGCAGGTTGAGTCGCTCTC...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTGAGAGCGACTCAACCTaGTGCAAGCCTCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLESDST*CKPLPL
Trigger: AAGGGGCAGAGGCTTGCAGCAGGTTGAGTCGCTCTC...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCGGTTGCCGCCACAGGTaGTTCGGGGCTCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIGCRHR*FGALVM
Trigger: CATGACCAGAGCCCCGAAGCACCTGTGGCGGCAACC...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCGGTTGCCGCCACAGGTaGTTCGGGGCTCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPGCRHR*FGALVM
Trigger: CATGACCAGAGCCCCGAAGCACCTGTGGCGGCAACC...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAAGAAGCGCTGTTGGATaGGGATGGGGCGCCGGGGTT +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSRSAVG*GWGAGV
Trigger: AACCCCGGCGCCCCATCCGCATCCAACAGCGCTTCT...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGTCCGAGACATGGCCTTaGGCGAGAGTTCATAGTCGC +
Preference number: 4 (lower is better)
Translates to: QEPHGASSWKVCLPRAKGSETWP*ARVHSR
Trigger: GCGACTATGAACTCTCGCCCAAGGCCATGTCTCGGA...CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGCTCCATGTAGGTCGCTaGCCACAGAGGAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: CLPRAKGLYHPLPLQFTQLHVGR*PQRSSE
Trigger: CTCGGAACTCCTCTGTGGCCAGCGACCTACATGGAG...CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCACTCCATGTAGGTCGCTaGCCACAGAGGAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPLHVGR*PQRSSE
Trigger: CTCGGAACTCCTCTGTGGCCAGCGACCTACATGGAG...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCAGAACGGTCCGCAGACTaGCCAGGACCTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPERSAD*PGPGQR
Trigger: CCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTC...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCGAGGGAGCTGATTGCTaGATGAAGGGTTTCCGACGG +
Preference number: 4 (lower is better)
Translates to: QEPKGFTIHCPCSSRRAGEGADC*MKGFRR
Trigger: CCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTC...GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCGAGGGAGCTGATTGCTaGATGAAGGGTTTCCGACGG +
Preference number: 4 (lower is better)
Translates to: KSQRALPSIAPAVHAGLAEGADC*MKGFRR
Trigger: CCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTC...GGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGCTGGTTTCGGACAGGTaGGTCAACTCCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRSHMEPLPGKSACQEPKLVSDR*VNSRFR
Trigger: CCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAG...CTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VCLPRAKGLYHPLPLQFTMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...CGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCATCCACCTCGGTCTGCTaGTCCAGGAAGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSSTSVC*SRKVRE
Trigger: CTCCCGGACCTTCCTGGACCAGCAGACCGAGGTGGA...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCTCCACCTCGGTCTGCTaGTCCAGGAAGGTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LFLESLPAKSQRALPSIASTSVC*SRKVRE
Trigger: CTCCCGGACCTTCCTGGACCAGCAGACCGAGGTGGA...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCACCTCAGCGGTCACCTTaGGCAGCTCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPPQRSP*AAPPRS
Trigger: AGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGG...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCCCTCAGCGGTCACCTTaGGCAGCTCCACCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFPQRSP*AAPPRS
Trigger: AGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGG...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAACCGGGACATGGGCTGTaGGGCCTCCTCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: PWEPPITKSLIVSLNGWEPGHGL*GLLSGH
Trigger: GTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGG...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATGGCTGAGGAGAGGCTaGCACTGTGGCAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPWLRRG*HCGRAH
Trigger: ATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCA...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GTGCACCAGGTTCTGCAAGACCTGGATTCGGTCGGAATAGTTGTCCAGGAGGAGTGGCTGAGGAGAGGCTaGCACTGTGGCAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: VHQVLQDLDSVGIVVQEEWLRRG*HCGRAH
Trigger: ATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCA...CTCCTCCTGGACAACTATTCCGACCGAATCCAGGTCTTGCAGAACCTGGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCCAAAGCGTGGGACAGTaGCTGAGGAGAGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPQSVGQ*LRRGWH
Trigger: GTGCCAGCCTCTCCTCAGCCACTGTCCCACGCTTTG...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGCAAAGCGTGGGACAGTaGCTGAGGAGAGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQQSVGQ*LRRGWH
Trigger: GTGCCAGCCTCTCCTCAGCCACTGTCCCACGCTTTG...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCCAAAGCGTGGGACAGTaGCTGAGGAGAGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WSLFLESLPAKSQRALPSQSVGQ*LRRGWH
Trigger: GTGCCAGCCTCTCCTCAGCCACTGTCCCACGCTTTG...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAAAGCGTGGGACAGTaGCTGAGGAGAGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLQSVGQ*LRRGWH
Trigger: GTGCCAGCCTCTCCTCAGCCACTGTCCCACGCTTTG...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCATCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPSSWSV*TPKRGT
Trigger: TGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGA...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAGCCAGTTGCTCCTCCTaGTCAGTCTGGACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPASCSS*SVWTPK
Trigger: CTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGC...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCGCCAGTTGCTCCTCCTaGTCAGTCTGGACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PGKSACQEPKGFTIHCPCASCSS*SVWTPK
Trigger: CTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGC...GCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCAGCACATGCGTGGACTaGGCCACGTCGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPSTCVD*ATSAAC
Trigger: ACATGCCGCCGACGTGGCCCAGTCCACGCATGTGCT...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCGGTCCACGTCGTGGATaGCGCTTGCAAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPGPRRG*RLQRGQ
Trigger: CTGCCCTCTTTGCAAGCGCCATCCACGACGTGGACC...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGATGGTCCACGTCGTaGATGGCGCTTGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: CLPRAKGLYHPLPLQFTQGWSTS*MALAKR
Trigger: CCTCTTTGCAAGCGCCATCCACGACGTGGACCATCC...CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGCAGGTCCTGTGCATCTaGGTGGACCAGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQQVLCI*VDQVSP
Trigger: TGGGCTGACCTGGTCCACCCAGATGCACAGGACCTG...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCACAGGTCCTGTGCATCTaGGTGGACCAGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LESLPAKSQRALPSIAPAQVLCI*VDQVSP
Trigger: TGGGCTGACCTGGTCCACCCAGATGCACAGGACCTG...TGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCCGGGGGATCTTGCTCTaGTACCACTCTCGATTGTCC +
Preference number: 4 (lower is better)
Translates to: RSHMEPLPGKSACQEPKGRGILL*YHSRLS
Trigger: GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCG...GCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGTCTAGGGTCAGAGTaGACCCCAGCCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFSLGSE*TPARCL
Trigger: GAGGCACCTGGCTGGGGTCCACTCTGACCCTAGACT...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGACAGGGAGATGCCTTTaGGATGGTCTCCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRTGRCL*DGLLTP
Trigger: GGGAGTCAGGAGACCATCCCAAAGGCATCTCCCTGT...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp CCTCTCGCGACTTCGTCTCTTCATCTGGACCCTGAAACTGTTCCCACGGGGGCCCTCAGCCTCCTCATTTaGCTGCTCCTAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: PLATSSLHLDPETVPTGALSLLI*LLLGIA
Trigger: AGCAATGCCTAGGAGCAGCCAAATGAGGAGGCTGAG...GGCCCCCGTGGGAACAGTTTCAGGGTCCAGATGAAGAGACGAAGTCGCGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595343.5
3UTR CAA 72 bp GAGAGCCGCTTGGTAGAGGAAGACAGGGAGATGCCTTaGGGATGGTCTCCTGACTCCCCACCCTTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ESRLVEEDREMP*GWSPDSPPFVQ
Trigger: CTGCACAAAGGGTGGGGAGTCAGGAGACCATCCCAAAGGCATCTCCCTGTCTTCCTCTACCAAGCGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR TCA 90 bp CTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGCAGGCGGATGCTCTaGTTCACCAAAAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPRAKGLYHPLPLQFTQGCRRML*FTKSFL
Trigger: CAGGAAGCTTTTGGTGAATCAGAGCATCCGCCTGCA...GCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262805.16
ENST00000599188.5
CDS-3UTR TCA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCGAGCTGATTGCTGGATaGAGGGTTTCCGACGGGTCC +
Preference number: 4 (lower is better)
Translates to: WSLFLESLPAKSQRALPSELIAG*RVSDGS
Trigger: GGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTC...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp GGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGCTCCGCCACCTTaGACACATCAAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: GATWSLFLESLPAKSQRALAPPP*THQVPT
Trigger: AGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAA...AGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp GCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGTTAGCTCCGCCACCTTaGACACATCAAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: ACQEPKGFTIHCPCSSRRLAPPP*THQVPT
Trigger: AGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAA...CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTAAGCCCACAGCCAGGTaGTGGTTCTCCAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVKPTAR*WFSSTE
Trigger: CTCGGTGCTGGAGAACCATCACCTGGCTGTGGGCTT...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATAAGCCCACAGCCAGGTaGTGGTTCTCCAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHKPTAR*WFSSTE
Trigger: CTCGGTGCTGGAGAACCATCACCTGGCTGTGGGCTT...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAAGCCCACAGCCAGGTaGTGGTTCTCCAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFKPTAR*WFSSTE
Trigger: CTCGGTGCTGGAGAACCATCACCTGGCTGTGGGCTT...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCGTCGCTGCTTGGCGCTaGGGTTCTGGAAGATATCGC +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPVAAWR*GSGRYR
Trigger: GCGATATCTTCCAGAACCTCAGCGCCAAGCAGCGAC...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp AAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGTCGCTGCTTGGCGCTaGGGTTCTGGAAGATATCGC +
Preference number: 4 (lower is better)
Translates to: KQEPHGASSWKVCLPRAKVAAWR*GSGRYR
Trigger: GCGATATCTTCCAGAACCTCAGCGCCAAGCAGCGAC...TTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCCCAGCACCATGTCAATaGCCATCCTGCGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRPAPCQ*PSCADS
Trigger: TGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGG...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp TGGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCCCAGCACCATGTCAATaGCCATCCTGCGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: WESEAGATWSLFLESLPAPAPCQ*PSCADS
Trigger: TGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGG...GGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGAAGTATGACCGGGTCTaGGTTGGGTCTGATCACGTC +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRKYDRV*VGSDHV
Trigger: GACGTGATCAGACCCAACTCAGACCCGGTCATACTT...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR TCA 90 bp CCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCTTTGGGATGGTCTCCTaGCTCCCCACCCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PGKSACQEPKGFTIHCPCFGMVS*LPTLCA
Trigger: TGCACAAAGGGTGGGGAGTCAGGAGACCATCCCAAA...GCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTTTCCGACGGGTCCCTaGTTGGCTGCTCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPFPTGP*LAAPRH
Trigger: ATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGGAAA...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACTTTCCGACGGGTCCCTaGTTGGCTGCTCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYFPTGP*LAAPRH
Trigger: ATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGGAAA...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCCAGGAGGGAGCTGATTaGTGGATGAAGGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSQEGAD*WMKGFR
Trigger: TCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTG...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGCAGGAGGGAGCTGATTaGTGGATGAAGGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRQEGAD*WMKGFR
Trigger: TCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTG...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGAGCTCCTTGGCCAGTTaGTCCTCCTGGTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQSSLAS*SSWSVW
Trigger: CCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCT...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAAGCTCCTTGGCCAGTTaGTCCTCCTGGTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LESLPAKSQRALPSIAPASSLAS*SSWSVW
Trigger: CCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCT...TGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAAGCTCCTTGGCCAGTTaGTCCTCCTGGTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALSSLAS*SSWSVW
Trigger: CCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCT...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCGTCGTGGATGGCGCTTaGAAAGAGGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: HMEPLPGKSACQEPKGFTVVDGA*KEGSQD
Trigger: ATCCTGGCTGCCCTCTTTGCAAGCGCCATCCACGAC...GGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGTCGTGGATGGCGCTTaGAAAGAGGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALVVDGA*KEGSQD
Trigger: ATCCTGGCTGCCCTCTTTGCAAGCGCCATCCACGAC...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTGTCGTGGATGGCGCTTaGAAAGAGGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VSGNSKASLAKAVSSPSSVVDGA*KEGSQD
Trigger: ATCCTGGCTGCCCTCTTTGCAAGCGCCATCCACGAC...AGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACGTCGTGGATGGCGCTTaGAAAGAGGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYVVDGA*KEGSQD
Trigger: ATCCTGGCTGCCCTCTTTGCAAGCGCCATCCACGAC...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCGCAGACTCAGTCGCTaGTTGGCGCTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIRRLSR*LALRFW
Trigger: CCAGAACCTCAGCGCCAAGCAGCGACTGAGTCTGCG...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCGCAGACTCAGTCGCTaGTTGGCGCTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHRRLSR*LALRFW
Trigger: CCAGAACCTCAGCGCCAAGCAGCGACTGAGTCTGCG...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGACGCAGACTCAGTCGCTaGTTGGCGCTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRRRLSR*LALRFW
Trigger: CCAGAACCTCAGCGCCAAGCAGCGACTGAGTCTGCG...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AGCTCCGCCACCTTGAACACATCAAGTCCCCACTTGTTGGTGTCTTCTAGCTCCCGCAGACTCAGTCGCTaGTTGGCGCTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSATLNTSSPHLLVSSSSRRLSR*LALRFW
Trigger: CCAGAACCTCAGCGCCAAGCAGCGACTGAGTCTGCG...GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCGTCCAGCAGGTCCTGTaGATCTGGGTGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFVQQVL*IWVDQV
Trigger: GACCTGGTCCACCCAGATGCACAGGACCTGCTGGAC...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAACCATCCATTGCCCCTaGAGTTCACGCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSTIHCP*SSRRAG
Trigger: GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGT...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGCTTTACCATCCATTaGCCCTGCAGTTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHAGFTIH*PCSSRR
Trigger: CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCC...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCCCTGGAAAGTCTGCCTaGCAAGAGCCAAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: KSQRALPSIAPAVHAGLAPGKSA*QEPKGF
Trigger: AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG...GGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCATGGACCCCAGCCAGGTaGCTCCAATTAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSWTPAR*LQLDPG
Trigger: CCCAGGGTCTAATTGGAGGCACCTGGCTGGGGTCCA...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GGTCAACTCCCGGTTCAGGATCCGCTTGAACTTGTTGGAGGCCATCTCCCCCACGATCTGTTCCCCGAGTaGCTGTGTGACCATGAGATC +
Preference number: 4 (lower is better)
Translates to: GQLPVQDPLELVGGHLPHDLFPE*LCDHEI
Trigger: GATCTCATGGTCACACAGGCACTCGGGGAACAGATC...GTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCGGGAGTTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR GCA 90 bp TTTCCCCACTCACATTTCCATGCTCTTGCAGAGAGCCGCTTGGTAGAGGAAGACCCAGGTCAAAGCGCCTaGAGGAGGAAACGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FPHSHFHALAESRLVEEDPGQSA*RRKRAR
Trigger: CCTGGCCCGTTTCCTCCTGCAGGCGCTTTGACCTGG...GTCTTCCTCTACCAAGCGGCTCTCTGCAAGAGCATGGAAATGTGAGTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCCGAGGAGCTGTCGATaGCCAGATGGTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHPRSCR*PDGAPL
Trigger: CAGTGGTGCACCATCTGGGCATCGACAGCTCCTCGG...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAATTGCCCAGGCTGGAGTaGAGTGGCGCGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PWEPPITKSLIVSLNGWELPRLE*SGATSA
Trigger: AGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGCAA...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp CTGGGCTCAAGCGATCCCCTTTGTCTCAACCTTCTGAGTAGCTGGGATTCTCAGCAGTCTTCAGAGACATaGCGGGCACAGAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: LGSSDPLCLNLLSSWDSQQSSET*RAQSPL
Trigger: GAGGGGGCTCTGTGCCCGGCATGTCTCTGAAGACTG...CTGAGAATCCCAGCTACTCAGAAGGTTGAGACAAAGGGGATCGCTTGAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp CCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCTCCGAGACATGGCCTTaGGCGAGAGTTCATAGTCGC +
Preference number: 4 (lower is better)
Translates to: PGKSACQEPKGFTIHCPCSETWP*ARVHSR
Trigger: GCGACTATGAACTCTCGCCCAAGGCCATGTCTCGGA...GCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCATCCGAGACATGGCCTTaGGCGAGAGTTCATAGTCGC +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHASETWP*ARVHSR
Trigger: GCGACTATGAACTCTCGCCCAAGGCCATGTCTCGGA...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCAGGAGTTCCGAGACATaGCCTTGGGCGAGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: KSQRALPSIAPAVHAGLARSSET*PWARVH
Trigger: ATGAACTCTCGCCCAAGGCCATGTCTCGGAACTCCT...GGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGAGGAGTTCCGAGACATaGCCTTGGGCGAGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: QEPHGASSWKVCLPRAKGRSSET*PWARVH
Trigger: ATGAACTCTCGCCCAAGGCCATGTCTCGGAACTCCT...CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCTCCATGTAGGTCGCTaGCCACAGAGGAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYLHVGR*PQRSSE
Trigger: CTCGGAACTCCTCTGTGGCCAGCGACCTACATGGAG...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCACTCCATGTAGGTCGCTaGCCACAGAGGAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: LESLPAKSQRALPSIAPALHVGR*PQRSSE
Trigger: CTCGGAACTCCTCTGTGGCCAGCGACCTACATGGAG...TGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCACTCCATGTAGGTCGCTaGCCACAGAGGAGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPLHVGR*PQRSSE
Trigger: CTCGGAACTCCTCTGTGGCCAGCGACCTACATGGAG...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTAGACTGGCCAGGACCTaGGCAAAGGGCGTCACAATC +
Preference number: 4 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSRLART*AKGVTI
Trigger: GATTGTGACGCCCTTTGCCCAGGTCCTGGCCAGTCT...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCGACGGGTCCCTGCTTaGCTGCTCCTAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHRRVPA*LLLGIA
Trigger: AGCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCG...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGACGGGTCCCTGCTTaGCTGCTCCTAGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSRRVPA*LLLGIA
Trigger: AGCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCG...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCGAGGGAGCTGATTGCTaGATGAAGGGTTTCCGACGG +
Preference number: 4 (lower is better)
Translates to: SEAGATWSLFLESLPAKSEGADC*MKGFRR
Trigger: CCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTC...GCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCCTGGTTTCGGACAGGTaGGTCAACTCCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPLVSDR*VNSRFR
Trigger: CCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAG...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SLFLESLPAKSQRALPSIGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAAGGTTCCCGGAGCGGCTaGTTTCGGACAGGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LLFFLLILFLCLLQSQFKGSRSG*FRTGGS
Trigger: TGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACC...TTTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LESLPAKSQRALPSIAPAMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...TGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCGAGAGGCTGGCACTGTaGCAGAGCCCATGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: PLPGKSACQEPKGFTIHCERLAL*QSPCRP
Trigger: TGGCCTACATGGGCTCTGCCACAGTGCCAGCCTCTC...GCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATTGGCTGAGGAGAGGCTaGCACTGTGGCAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HGASSWKVCLPRAKGLYHWLRRG*HCGRAH
Trigger: ATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCA...ATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGGCTGAGGAGAGGCTaGCACTGTGGCAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHWLRRG*HCGRAH
Trigger: ATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCA...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTTGGCTGAGGAGAGGCTaGCACTGTGGCAGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SGNSKASLAKAVSSPSSSWLRRG*HCGRAH
Trigger: ATGGGCTCTGCCACAGTGCCAGCCTCTCCTCAGCCA...AGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTCAAAGCGTGGGACAGTaGCTGAGGAGAGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPQSVGQ*LRRGWH
Trigger: GTGCCAGCCTCTCCTCAGCCACTGTCCCACGCTTTG...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCCCCACACCTCGTCGGAGTTTATCCAAGTACTAGGATCAGGTTACAGAGGGGACAAAGCGTGGGACAGTaGCTGAGGAGAGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PPHLVGVYPSTRIRLQRGQSVGQ*LRRGWH
Trigger: GTGCCAGCCTCTCCTCAGCCACTGTCCCACGCTTTG...TCCCCTCTGTAACCTGATCCTAGTACTTGGATAAACTCCGACGAGGTGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTTCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFSSWSV*TPKRGT
Trigger: TGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGA...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPSSWSV*TPKRGT
Trigger: TGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGA...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGCCAGTTGCTCCTCCTaGTCAGTCTGGACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KQEPHGASSWKVCLPRAKASCSS*SVWTPK
Trigger: CTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGC...TTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCAGCCAGTTGCTCCTCCTaGTCAGTCTGGACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPASCSS*SVWTPK
Trigger: CTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGC...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTGCCAGTTGCTCCTCCTaGTCAGTCTGGACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VSGNSKASLAKAVSSPSSASCSS*SVWTPK
Trigger: CTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGC...AGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCTGTCTTCTAGCTCCTTaGCCAGTTGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KSQRALPSIAPAVHAGLACLLAP*PVAPPG
Trigger: ACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACA...GGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGGCCAGTGTGTCTGCTaGGATCTGGAATGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ACQEPKGFTIHCPCSSRRGQCVC*DLECLQ
Trigger: CTGAAGACATTCCAGATCCCAGCAGACACACTGGCC...CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTGGCCAGTGTGTCTGCTaGGATCTGGAATGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GATWSLFLESLPAKSQRAGQCVC*DLECLQ
Trigger: CTGAAGACATTCCAGATCCCAGCAGACACACTGGCC...AGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTAGCACATGCGTGGACTaGGCCACGTCGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: SLFLESLPAKSQRALPSISTCVD*ATSAAC
Trigger: ACATGCCGCCGACGTGGCCCAGTCCACGCATGTGCT...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGGGTCCACGTCGTGGATaGCGCTTGCAAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLGPRRG*RLQRGQ
Trigger: CTGCCCTCTTTGCAAGCGCCATCCACGACGTGGACC...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCCCCACACCTCGTCGGAGTTTATCCAAGTACTAGGATCAGGTTACAGAGGGGAGGTCCACGTCGTGGATaGCGCTTGCAAAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPHLVGVYPSTRIRLQRGGPRRG*RLQRGQ
Trigger: CTGCCCTCTTTGCAAGCGCCATCCACGACGTGGACC...TCCCCTCTGTAACCTGATCCTAGTACTTGGATAAACTCCGACGAGGTGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTGGATGGTCCACGTCGTaGATGGCGCTTGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSGWSTS*MALAKR
Trigger: CCTCTTTGCAAGCGCCATCCACGACGTGGACCATCC...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGGATGGTCCACGTCGTaGATGGCGCTTGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LESLPAKSQRALPSIAPAGWSTS*MALAKR
Trigger: CCTCTTTGCAAGCGCCATCCACGACGTGGACCATCC...TGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGTCAATGAAACCCACCTaGGACTTCTCCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRSMKPT*DFSTEA
Trigger: GGCCTCAGTGGAGAAGTCCCAGGTGGGTTTCATTGA...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGTCAATGAAACCCACCTaGGACTTCTCCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRAKGLYHPLPLQFTQGWSMKPT*DFSTEA
Trigger: GGCCTCAGTGGAGAAGTCCCAGGTGGGTTTCATTGA...CCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCTCAATGAAACCCACCTaGGACTTCTCCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QEPKGFTIHCPCSSRRAGSMKPT*DFSTEA
Trigger: GGCCTCAGTGGAGAAGTCCCAGGTGGGTTTCATTGA...GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGACAGGTCCTGTGCATCTaGGTGGACCAGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRQVLCI*VDQVSP
Trigger: TGGGCTGACCTGGTCCACCCAGATGCACAGGACCTG...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CCTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAACAGGTCCTGTGCATCTaGGTGGACCAGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPLLPPHPLPLPPPESVQQVLCI*VDQVSP
Trigger: TGGGCTGACCTGGTCCACCCAGATGCACAGGACCTG...TTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGGTCTCCCTAAATGGGTaGGAAAGTGAAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PAKSQRALPSIAPAVHAGVSLNG*ESEAGA
Trigger: GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGAC...CCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCAGTCTAGGGTCAGAGTaGACCCCAGCCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTISLGSE*TPARCL
Trigger: GAGGCACCTGGCTGGGGTCCACTCTGACCCTAGACT...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTGACCACTGGAGAGGGTaGACTAGAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSDHWRG*TRGSSR
Trigger: TCTGCTGGAGCCTCTAGTCCACCCTCTCCAGTGGTC...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGGACCACTGGAGAGGGTaGACTAGAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQDHWRG*TRGSSR
Trigger: TCTGCTGGAGCCTCTAGTCCACCCTCTCCAGTGGTC...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GACAGCACCTCTCCTCACAGGGATAGAAGCCCAGGAGAAAGACACCAGGGCATCCTCAAGAGTGACCACTaGAGAGGGTGGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DSTSPHRDRSPGERHQGILKSDH*RGWTRG
Trigger: GCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAG...GATGCCCTGGTGTCTTTCTCCTGGGCTTCTATCCCTGTGAGGAGAGGTGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCGGTAGAAGGTGGAACTaGGGCTCAAGGTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPGRRWN*GSRWGR
Trigger: TCGGCCCCACCTTGAGCCCCAGTTCCACCTTCTACC...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCGGTAGAAGGTGGAACTaGGGCTCAAGGTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: LFLESLPAKSQRALPSIAGRRWN*GSRWGR
Trigger: TCGGCCCCACCTTGAGCCCCAGTTCCACCTTCTACC...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAAGCCTCCCCAGTAGCTaGGATTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSSLPSS*DYRHPP
Trigger: TGGCGGGTGCCTGTAATCCCAGCTACTGGGGAGGCT...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR CAA 72 bp GCTGTGAGGGGCCGGTTCCCACTTAGCTCCGCCACCTaGAACACATCAAGTCCCCACTTGTTGGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVRGRFPLSSAT*NTSSPHLLVSS
Trigger: AGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAGTGGGAACCGGCCCCTCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
3UTR CAA 72 bp AGATGCCTTTGGGATGGTCTCCTGACTCCCCACCCTTaGTGCAGGGCTACTACAGAGGCAGAAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RCLWDGLLTPHP*CRATTEAESWH
Trigger: GTGCCAGCTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGACCATCCCAAAGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR TCA 90 bp TGTCTTCTAGCTCCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCTGCAGGCGGATGCTCTaGTTCACCAAAAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: CLLAPWPVAPPGQSGPQSCRRML*FTKSFL
Trigger: CAGGAAGCTTTTGGTGAATCAGAGCATCCGCCTGCA...GCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR TCA 90 bp GACAGCACCTCTCCTCACAGGGATAGAAGCCCAGGAGAAAGACACCAGGGCATCTCTGCAGGAGGGAGCTaGTTGCTGGATGAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: DSTSPHRDRSPGERHQGISAGGS*LLDEGF
Trigger: AAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGA...GATGCCCTGGTGTCTTTCTCCTGGGCTTCTATCCCTGTGAGGAGAGGTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp GTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGTTAGCTCCGCCACCTTaGACACATCAAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: VCLPRAKGLYHPLPLQFTLAPPP*THQVPT
Trigger: AGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAA...CGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTAAGCCCACAGCCAGGTaGTGGTTCTCCAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: SLFLESLPAKSQRALPSIKPTAR*WFSSTE
Trigger: CTCGGTGCTGGAGAACCATCACCTGGCTGTGGGCTT...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp CCCCCACACCTCGTCGGAGTTTATCCAAGTACTAGGATCAGGTTACAGAGGGGAGTCGCTGCTTGGCGCTaGGGTTCTGGAAGATATCGC +
Preference number: 4 (lower is better)
Translates to: PPHLVGVYPSTRIRLQRGVAAWR*GSGRYR
Trigger: GCGATATCTTCCAGAACCTCAGCGCCAAGCAGCGAC...TCCCCTCTGTAACCTGATCCTAGTACTTGGATAAACTCCGACGAGGTGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR TCA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCGTCGCTGCTTGGCGCTaGGGTTCTGGAAGATATCGC +
Preference number: 4 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFVAAWR*GSGRYR
Trigger: GCGATATCTTCCAGAACCTCAGCGCCAAGCAGCGAC...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCCAGCACCATGTCAATaGCCATCCTGCGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLPAPCQ*PSCADS
Trigger: TGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGG...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp ATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCCCCGCTCGGGGTTGGTaGGGTCTGAGGGACTTCGGG +
Preference number: 4 (lower is better)
Translates to: ITKSLIVSLNGWESEAGAPARGW*GLRDFG
Trigger: CCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGG...GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCGCCGCTGCAGGCGGATaGTCTGATTCACCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: WSLFLESLPAKSQRALPSAAAGG*SDSPKA
Trigger: AGCTTTTGGTGAATCAGAGCATCCGCCTGCAGCGGC...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262805.16
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGTTTCCGACGGGTCCCTaGTTGGCTGCTCCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLFPTGP*LAAPRH
Trigger: ATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGGAAA...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCAAGCTCCTTGGCCAGTTaGTCCTCCTGGTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPSSLAS*SSWSVW
Trigger: CCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCT...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACCAGTGCACCAGGTTCTaGAAGACCTGGATTCGGTCG +
Preference number: 4 (lower is better)
Translates to: SLPAKSQRALPSIAPAVHQCTRF*KTWIRS
Trigger: CGACCGAATCCAGGTCTTGCAGAACCTGGTGCACTG...GTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAAGTCCAGCAGGTCCTGTaGATCTGGGTGGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLFFLLILFLCLLQSQFKVQQVL*IWVDQV
Trigger: GACCTGGTCCACCCAGATGCACAGGACCTGCTGGAC...TTTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GACAGCACCTCTCCTCACAGGGATAGAAGCCCAGGAGAAAGACACCAGGGCATCGACTTCGGGGGATCTTaGTCTGGTACCACTCTCGAT +
Preference number: 4 (lower is better)
Translates to: DSTSPHRDRSPGERHQGIDFGGS*SGTTLD
Trigger: ATCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTC...GATGCCCTGGTGTCTTTCTCCTGGGCTTCTATCCCTGTGAGGAGAGGTGCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTGACTTCGGGGGATCTTaGTCTGGTACCACTCTCGAT +
Preference number: 4 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLDFGGS*SGTTLD
Trigger: ATCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTC...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGGCTTTACCATCCATTaGCCCTGCAGTTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: SLPAKSQRALPSIAPAVHGFTIH*PCSSRR
Trigger: CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCC...GTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGGCTTTACCATCCATTaGCCCTGCAGTTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALGFTIH*PCSSRR
Trigger: CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCC...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTCCTGGAAAGTCTGCCTaGCAAGAGCCAAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: CQEPKGFTIHCPCSSRRAPGKSA*QEPKGF
Trigger: AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG...AGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCTCTTCCTGGAAAGTCTaGCTGCCAAGAGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SEAGATWSLFLESLPAKSSSWKV*LPRAKG
Trigger: CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA...GCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCATCTTCCTGGAAAGTCTaGCTGCCAAGAGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHASSWKV*LPRAKG
Trigger: CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGGCATCGTAAGAGGCTaGCCCTTAGAGAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: AGATWSLFLESLPAKSQRGIVRG*PLESSF
Trigger: AAAAGAGCTCTCTAAGGGGCAGCCTCTTACGATGCC...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp ACCCCACGCCTCTCGCGACTTCGTCTCTTCATCTGGACCCTGAAACTGTTCCCAGATCTGTTCCCCGAGTaGCTGTGTGACCATGAGATC +
Preference number: 4 (lower is better)
Translates to: TPRLSRLRLFIWTLKLFPDLFPE*LCDHEI
Trigger: GATCTCATGGTCACACAGGCACTCGGGGAACAGATC...TGGGAACAGTTTCAGGGTCCAGATGAAGAGACGAAGTCGCGAGAGGCGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595343.5
CDS-3UTR CCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAAGGAGTTCCGAGACATaGCCTTGGGCGAGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHARSSET*PWARVH
Trigger: ATGAACTCTCGCCCAAGGCCATGTCTCGGAACTCCT...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAGGAGTTCCGAGACATaGCCTTGGGCGAGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RLQGTGVQCQATPRPLWLRSSET*PWARVH
Trigger: ATGAACTCTCGCCCAAGGCCATGTCTCGGAACTCCT...TAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR CCA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCAGACTGGCCAGGACCTaGGCAAAGGGCGTCACAATC +
Preference number: 4 (lower is better)
Translates to: LFLESLPAKSQRALPSIARLART*AKGVTI
Trigger: GATTGTGACGCCCTTTGCCCAGGTCCTGGCCAGTCT...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAAGACTGGCCAGGACCTaGGCAAAGGGCGTCACAATC +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSRLART*AKGVTI
Trigger: GATTGTGACGCCCTTTGCCCAGGTCCTGGCCAGTCT...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGAGGGAGCTGATTGCTaGATGAAGGGTTTCCGACGG +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALEGADC*MKGFRR
Trigger: CCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTC...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCCTGGTTTCGGACAGGTaGGTCAACTCCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFLVSDR*VNSRFR
Trigger: CCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAG...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACTGGTTTCGGACAGGTaGGTCAACTCCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSLVSDR*VNSRFR
Trigger: CCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAG...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTGGGCTCAAGCGATCCCCTTTGTCTCAACCTTCTGAGTAGCTGGGATTCTCAGCTGGTTTCGGACAGGTaGGTCAACTCCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LGSSDPLCLNLLSSWDSQLVSDR*VNSRFR
Trigger: CCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAG...CTGAGAATCCCAGCTACTCAGAAGGTTGAGACAAAGGGGATCGCTTGAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGGTTTCGGACAGGTaGGTCAACTCCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPLVSDR*VNSRFR
Trigger: CCTGAACCGGGAGTTGACCCACCTGTCCGAAACCAG...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGTCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLSSWSV*TPKRGT
Trigger: TGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGA...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCGCCAGTTGCTCCTCCTaGTCAGTCTGGACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LFLESLPAKSQRALPSIAASCSS*SVWTPK
Trigger: CTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGC...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCGCCAGTTGCTCCTCCTaGTCAGTCTGGACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GVQCQATPRPLWLKLSLPASCSS*SVWTPK
Trigger: CTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGC...GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCTGTCTTCTAGCTCCTTaGCCAGTTGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRCLLAP*PVAPPG
Trigger: ACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACA...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCAAGTCCCCACTTGTTaGTGTCTTCTAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QEPKGFTIHCPCSSRRAGQVPTC*CLLAPW
Trigger: CCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTG...GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCCAAGTCCCCACTTGTTaGTGTCTTCTAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KSQRALPSIAPAVHAGLAQVPTC*CLLAPW
Trigger: CCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTG...GGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAGTGTCTGCTGGGATCTaGAATGTCTTCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPVSAGI*NVFSRS
Trigger: GGACCTGCTGAAGACATTCCAGATCCCAGCAGACAC...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGTGTCTGCTGGGATCTaGAATGTCTTCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHAVSAGI*NVFSRS
Trigger: GGACCTGCTGAAGACATTCCAGATCCCAGCAGACAC...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGCACATGCGTGGACTaGGCCACGTCGGCGGCATGT +
Preference number: 4 (lower is better)
Translates to: PWEPPITKSLIVSLNGWESTCVD*ATSAAC
Trigger: ACATGCCGCCGACGTGGCCCAGTCCACGCATGTGCT...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp TGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTCCAGCAGCACATGCGTaGACTGGGCCACGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: WEPPITKSLIVSLNGWESPAAHA*TGPRRR
Trigger: CCGCCGACGTGGCCCAGTCCACGCATGTGCTGCTGG...ACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTGGATGGTCCACGTCGTaGATGGCGCTTGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVGWSTS*MALAKR
Trigger: CCTCTTTGCAAGCGCCATCCACGACGTGGACCATCC...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCCGGGGGATCTTGCTCTaGTACCACTCTCGATTGTCC +
Preference number: 4 (lower is better)
Translates to: HMEPLPGKSACQEPKGFTRGILL*YHSRLS
Trigger: GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCG...GGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACGGGGGATCTTGCTCTaGTACCACTCTCGATTGTCC +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALRGILL*YHSRLS
Trigger: GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCG...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCCAGAGTCAGTTCAAACTaGAATCTGTCAGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: KSQRALPSIAPAVHAGLARVSSN*NLSGPS
Trigger: GGACGGGCCTGACAGATTCCAGTTTGAACTGACTCT...GGCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGAGAGTCAGTTCAAACTaGAATCTGTCAGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLRVSSN*NLSGPS
Trigger: GGACGGGCCTGACAGATTCCAGTTTGAACTGACTCT...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGACTCCAAGGCCTCTTTaGCTAAAGCTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PRAKGLYHPLPLQFTQGWTPRPL*LKLSLP
Trigger: GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGT...CCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGACTCCAAGGCCTCTTTaGCTAAAGCTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PAKSQRALPSIAPAVHAGTPRPL*LKLSLP
Trigger: GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGT...CCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTCATGGAGCCTCTTCCTaGAAAGTCTGCCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: CQEPKGFTIHCPCSSRRAHGASS*KVCLPR
Trigger: TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG...AGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCGAAGCAGGAGCCACATaGAGCCTCTTCCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SACQEPKGFTIHCPCSSREAGAT*SLFLES
Trigger: ACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTC...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGTCTCCCTAAATGGGTaGGAAAGTGAAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHAVSLNG*ESEAGA
Trigger: GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGAC...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATGACCACTGGAGAGGGTaGACTAGAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHDHWRG*TRGSSR
Trigger: TCTGCTGGAGCCTCTAGTCCACCCTCTCCAGTGGTC...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTCTCAAGAGTGACCACTaGAGAGGGTGGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSLKSDH*RGWTRG
Trigger: GCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAG...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCAGAGAAAGGGGTCTaGGATAGCAGGGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PLPGKSACQEPKGFTIHCPEKGV*DSREQD
Trigger: GTCCTGCTCCCTGCTATCCCAGACCCCTTTCTCTGG...GCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCAGAGAAAGGGGTCTaGGATAGCAGGGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LFLESLPAKSQRALPSIAPEKGV*DSREQD
Trigger: GTCCTGCTCCCTGCTATCCCAGACCCCTTTCTCTGG...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCAGCCTCCCGAGTAGCTaGGATTCAGGCACCCAACAC +
Preference number: 4 (lower is better)
Translates to: LFLESLPAKSQRALPSIASLPSS*DSGTQH
Trigger: GTGTTGGGTGCCTGAATCCCAGCTACTCGGGAGGCT...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR CAA 72 bp AGCTCCGCCACCTTGAACACATCAAGTCCCCACTTGTaGGTGTCTTCTAGCTCCTTGGCCAGTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSATLNTSSPHL*VSSSSLASCSS
Trigger: GGAGGAGCAACTGGCCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR TCA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGAGCTGATTGCTGGATaGAGGGTTTCCGACGGGTCC +
Preference number: 4 (lower is better)
Translates to: SLFLESLPAKSQRALPSIELIAG*RVSDGS
Trigger: GGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTC...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTATCTGCAGGAGGGAGCTaGTTGCTGGATGAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALSAGGS*LLDEGF
Trigger: AAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGA...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp CCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCAGCACCATGTCAATaGCCATCCTGCGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: PLPGKSACQEPKGFTIHCPAPCQ*PSCADS
Trigger: TGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGG...GCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCACCAGCACCATGTCAATaGCCATCCTGCGCAGACTCA +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPPAPCQ*PSCADS
Trigger: TGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGG...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCATTCGGTCCAAGTATaGCCGGGTCTGAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPHSVQV*PGLSWV
Trigger: GACCCAACTCAGACCCGGTCATACTTGGACCGAATG...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR TCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCATGCCCAGATGGTGCTaGAGGGTAGAACAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIMPRWC*RVEQGR
Trigger: TCTCCCCTGTTCTACCCTTCAGCACCATCTGGGCAT...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594465.7
CDS-3UTR TCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCTGATTTTGAACTCCTaGTCTCAGGCGATCCACCCC +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYLILNS*SQAIHP
Trigger: GGGGTGGATCGCCTGAGATCAGGAGTTCAAAATCAG...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR TCA 90 bp CCCCCACACCTCGTCGGAGTTTATCCAAGTACTAGGATCAGGTTACAGAGGGGACCTCTAGGGGGAGTCTaGGGCAGTTTCAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: PPHLVGVYPSTRIRLQRGPLGGV*GSFRNQ
Trigger: CTGATTCCTGAAACTGCCTCAGACTCCCCCTAGAGG...TCCCCTCTGTAACCTGATCCTAGTACTTGGATAAACTCCGACGAGGTGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR TCA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTGCCCAGAAGAGGCTATaGTGGCAAGAAAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVAQKRL*WQESLR
Trigger: CCTGAGGCTTTCTTGCCATCATAGCCTCTTCTGGGC...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCCAGGAGGGAGCTGATTaGTGGATGAAGGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPQEGAD*WMKGFR
Trigger: TCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTG...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAACTGCCCCGTGTCCTCTaGAGGAGGGAGCTGATTGCT +
Preference number: 4 (lower is better)
Translates to: PWEPPITKSLIVSLNGWELPRVL*RRELIA
Trigger: AGCAATCAGCTCCCTCCTGCAGAGGACACGGGGCAG...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACCTCAGATCAGCACAGTaGACCAGGTTCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: SLPAKSQRALPSIAPAVHLRSAQ*TRFCKT
Trigger: GGTCTTGCAGAACCTGGTGCACTGTGCTGATCTGAG...GTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATGGCTTTACCATCCATTaGCCCTGCAGTTCACGCAGG +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHGFTIH*PCSSRR
Trigger: CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCC...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCCCTGGAAAGTCTGCCTaGCAAGAGCCAAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPPGKSA*QEPKGF
Trigger: AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCACCTGGAAAGTCTGCCTaGCAAGAGCCAAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPPGKSA*QEPKGF
Trigger: AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GTGCACCAGGTTCTGCAAGACCTGGATTCGGTCGGAATAGTTGTCCAGGAGGAGCCTGGAAAGTCTGCCTaGCAAGAGCCAAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VHQVLQDLDSVGIVVQEEPGKSA*QEPKGF
Trigger: AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG...CTCCTCCTGGACAACTATTCCGACCGAATCCAGGTCTTGCAGAACCTGGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR GCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCTTCCTGGAAAGTCTaGCTGCCAAGAGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPSSWKV*LPRAKG
Trigger: CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTTCCTCTTCCTGGAAAGTCTaGCTGCCAAGAGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GNSKASLAKAVSSPSSSSSSWKV*LPRAKG
Trigger: CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA...GGAAGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR GCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGCATCGTAAGAGGCTaGCCCTTAGAGAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHAGIVRG*PLESSF
Trigger: AAAAGAGCTCTCTAAGGGGCAGCCTCTTACGATGCC...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCAGTATGGAGTTCTaGGGACAGAGAAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLPSMEF*GQRKQG
Trigger: CCCCTGCTTTCTCTGTCCGCAGAACTCCATACTGGG...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTAGACTGGCCAGGACCTaGGCAAAGGGCGTCACAATC +
Preference number: 4 (lower is better)
Translates to: SLFLESLPAKSQRALPSIRLART*AKGVTI
Trigger: GATTGTGACGCCCTTTGCCCAGGTCCTGGCCAGTCT...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAATCCTCCTGGTCAGTCTaGACCCCAAAGCGTGGGACA +
Preference number: 4 (lower is better)
Translates to: LLFFLLILFLCLLQSQFKSSWSV*TPKRGT
Trigger: TGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGA...TTTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACTGTCTTCTAGCTCCTTaGCCAGTTGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLPAKSQRALPSIAPAVHCLLAP*PVAPPG
Trigger: ACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACA...GTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCTGTCTTCTAGCTCCTTaGCCAGTTGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HMEPLPGKSACQEPKGFTCLLAP*PVAPPG
Trigger: ACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACA...GGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAGTCCCCACTTGTTaGTGTCTTCTAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SEAGATWSLFLESLPAKSQVPTC*CLLAPW
Trigger: CCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTG...GCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp TGGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCCAAGTCCCCACTTGTTaGTGTCTTCTAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WESEAGATWSLFLESLPAQVPTC*CLLAPW
Trigger: CCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTG...GGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCGTGTCTGCTGGGATCTaGAATGTCTTCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HMEPLPGKSACQEPKGFTVSAGI*NVFSRS
Trigger: GGACCTGCTGAAGACATTCCAGATCCCAGCAGACAC...GGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCGGCCAGTGTGTCTGCTaGGATCTGGAATGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPGQCVC*DLECLQ
Trigger: CTGAAGACATTCCAGATCCCAGCAGACACACTGGCC...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCGGCCAGTGTGTCTGCTaGGATCTGGAATGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WSLFLESLPAKSQRALPSGQCVC*DLECLQ
Trigger: CTGAAGACATTCCAGATCCCAGCAGACACACTGGCC...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACTCAATGAAACCCACCTaGGACTTCTCCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYSMKPT*DFSTEA
Trigger: GGCCTCAGTGGAGAAGTCCCAGGTGGGTTTCATTGA...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTTCCTCAATGAAACCCACCTaGGACTTCTCCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GNSKASLAKAVSSPSSSSSMKPT*DFSTEA
Trigger: GGCCTCAGTGGAGAAGTCCCAGGTGGGTTTCATTGA...GGAAGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTCGGGGGATCTTGCTCTaGTACCACTCTCGATTGTCC +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPRGILL*YHSRLS
Trigger: GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCG...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCCGGGGGATCTTGCTCTaGTACCACTCTCGATTGTCC +
Preference number: 4 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFRGILL*YHSRLS
Trigger: GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCG...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCTCCGCCACCTTGAACACATCAAGTCCCCACTTGTTGGTGTCTTCTAGCTCCCGGGGGATCTTGCTCTaGTACCACTCTCGATTGTCC +
Preference number: 4 (lower is better)
Translates to: SSATLNTSSPHLLVSSSSRGILL*YHSRLS
Trigger: GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCG...GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCACGGGGGATCTTGCTCTaGTACCACTCTCGATTGTCC +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPRGILL*YHSRLS
Trigger: GGACAATCGAGAGTGGTACCAGAGCAAGATCCCCCG...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAAGAGTCAGTTCAAACTaGAATCTGTCAGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LPAKSQRALPSIAPAVHARVSSN*NLSGPS
Trigger: GGACGGGCCTGACAGATTCCAGTTTGAACTGACTCT...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCACTCCAAGGCCTCTTTaGCTAAAGCTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SEAGATWSLFLESLPAKSTPRPL*LKLSLP
Trigger: GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGT...GCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATGGAGCCTCTTCCTaGAAAGTCTGCCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYHGASS*KVCLPR
Trigger: TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACATGGAGCCTCTTCCTaGAAAGTCTGCCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALHGASS*KVCLPR
Trigger: TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGAAGCAGGAGCCACATaGAGCCTCTTCCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALEAGAT*SLFLES
Trigger: ACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTC...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCCCTCCAATTAGACCCTaGGAGCCACCTATAACTAAG +
Preference number: 4 (lower is better)
Translates to: RSHMEPLPGKSACQEPKGPPIRP*EPPITK
Trigger: CTTAGTTATAGGTGGCTCCCAGGGTCTAATTGGAGG...GCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCCTCAAGAGTGACCACTaGAGAGGGTGGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFLKSDH*RGWTRG
Trigger: GCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAG...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTCCCGGCCAAGACTTTTaGGTCAAAGGTCACCGTATC +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFPGQDF*VKGHRI
Trigger: GATACGGTGACCTTTGACCCAAAAGTCTTGGCCGGG...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR CCA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCGGTCAAAGCTGGGGGTaGGTTTTCAAGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFGQSWG*VFKKGR
Trigger: CCTGCCCTTCTTGAAAACCCACCCCCAGCTTTGACC...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR CCA 90 bp TGGGTCAACTCCCGGTTCAGGATCCGCTTGAACTTGTTGGAGGCCATCTCCCCCCTTCGTCTCTTCATCTaGACCCTGAAACTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WVNSRFRIRLNLLEAISPLRLFI*TLKLFP
Trigger: TGGGAACAGTTTCAGGGTCCAGATGAAGAGACGAAG...GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCGGGAGTTGACCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR CCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACTGATCGCTGCTAAATaGAGGGCAGGGAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSLIAAK*RAGRQG
Trigger: ACCCTGTCTCCCTGCCCTCCATTTAGCAGCGATCAG...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594465.7
CDS-3UTR CCA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCACAGAGGCAGAAAGCTaGCACGAAGTAGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSTEAES*HEVDEQ
Trigger: TTGCTCATCTACTTCGTGCCAGCTTTCTGCCTCTGT...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCGTAGGGGACCCAGTATaGAGTTCTGCGGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPVGDPV*SSADRE
Trigger: TTCTCTGTCCGCAGAACTCCATACTGGGTCCCCTAC...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594617.7
3UTR CAA 72 bp CTTAGCTCCGCCACCTTGAACACATCAAGTCCCCACTaGTTGGTGTCTTCTAGCTCCTTGGCCAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSSATLNTSSPH*LVSSSSLASCS
Trigger: GGAGCAACTGGCCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR TCA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGATCTGCAGGAGGGAGCTaGTTGCTGGATGAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRSAGGS*LLDEGF
Trigger: AAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGA...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTTTAGCTCCGCCACCTTaGACACATCAAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVLAPPP*THQVPT
Trigger: AGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAA...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAGTCGCTGCTTGGCGCTaGGGTTCTGGAAGATATCGC +
Preference number: 4 (lower is better)
Translates to: PWEPPITKSLIVSLNGWEVAAWR*GSGRYR
Trigger: GCGATATCTTCCAGAACCTCAGCGCCAAGCAGCGAC...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TTAAGTGACAGATGTGACTCAAGAGTGACCACTGGAGAGGGTGGACTAGAGGCTAGCTCCTTGGCCAGTTaGTCCTCCTGGTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSDRCDSRVTTGEGGLEASSLAS*SSWSVW
Trigger: CCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCT...AGCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAGTCACATCTGTCACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AGACCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGTCGTGGATGGCGCTTaGAAAGAGGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RPWEPPITKSLIVSLNGWVVDGA*KEGSQD
Trigger: ATCCTGGCTGCCCTCTTTGCAAGCGCCATCCACGAC...CCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCACTCAGATCAGCACAGTaGACCAGGTTCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPLRSAQ*TRFCKT
Trigger: GGTCTTGCAGAACCTGGTGCACTGTGCTGATCTGAG...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCTCAGATCAGCACAGTaGACCAGGTTCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTILRSAQ*TRFCKT
Trigger: GGTCTTGCAGAACCTGGTGCACTGTGCTGATCTGAG...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTCTCAGATCAGCACAGTaGACCAGGTTCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPLRSAQ*TRFCKT
Trigger: GGTCTTGCAGAACCTGGTGCACTGTGCTGATCTGAG...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAGACTTCGGGGGATCTTaGTCTGGTACCACTCTCGAT +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSDFGGS*SGTTLD
Trigger: ATCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTC...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCGACTTCGGGGGATCTTaGTCTGGTACCACTCTCGAT +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIDFGGS*SGTTLD
Trigger: ATCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTC...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCCTGGAAAGTCTGCCTaGCAAGAGCCAAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHPGKSA*QEPKGF
Trigger: AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp CATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATTCTTCCTGGAAAGTCTaGCTGCCAAGAGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: HGASSWKVCLPRAKGLYHSSWKV*LPRAKG
Trigger: CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA...ATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR GCA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGGGCATCGTAAGAGGCTaGCCCTTAGAGAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLGIVRG*PLESSF
Trigger: AAAAGAGCTCTCTAAGGGGCAGCCTCTTACGATGCC...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATAGGAGTTCCGAGACATaGCCTTGGGCGAGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHRSSET*PWARVH
Trigger: ATGAACTCTCGCCCAAGGCCATGTCTCGGAACTCCT...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATTGTCTTCTAGCTCCTTaGCCAGTTGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HGASSWKVCLPRAKGLYHCLLAP*PVAPPG
Trigger: ACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACA...ATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCTGTCTTCTAGCTCCTTaGCCAGTTGCTCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GVQCQATPRPLWLKLSLPCLLAP*PVAPPG
Trigger: ACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACA...GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTCAAGTCCCCACTTGTTaGTGTCTTCTAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFQVPTC*CLLAPW
Trigger: CCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTG...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTCAAGTCCCCACTTGTTaGTGTCTTCTAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSQVPTC*CLLAPW
Trigger: CCAAGGAGCTAGAAGACACCAACAAGTGGGGACTTG...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAGTGTCTGCTGGGATCTaGAATGTCTTCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSVSAGI*NVFSRS
Trigger: GGACCTGCTGAAGACATTCCAGATCCCAGCAGACAC...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCCCCACACCTCGTCGGAGTTTATCCAAGTACTAGGATCAGGTTACAGAGGGGAGTGTCTGCTGGGATCTaGAATGTCTTCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPHLVGVYPSTRIRLQRGVSAGI*NVFSRS
Trigger: GGACCTGCTGAAGACATTCCAGATCCCAGCAGACAC...TCCCCTCTGTAACCTGATCCTAGTACTTGGATAAACTCCGACGAGGTGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp AGCTCCGCCACCTTGAACACATCAAGTCCCCACTTGTTGGTGTCTTCTAGCTCCGTGTCTGCTGGGATCTaGAATGTCTTCAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSATLNTSSPHLLVSSSSVSAGI*NVFSRS
Trigger: GGACCTGCTGAAGACATTCCAGATCCCAGCAGACAC...GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR CCA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTGGCCAGTGTGTCTGCTaGGATCTGGAATGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVGQCVC*DLECLQ
Trigger: CTGAAGACATTCCAGATCCCAGCAGACACACTGGCC...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCTCAATGAAACCCACCTaGGACTTCTCCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTISMKPT*DFSTEA
Trigger: GGCCTCAGTGGAGAAGTCCCAGGTGGGTTTCATTGA...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTACTCCAAGGCCTCTTTaGCTAAAGCTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSTPRPL*LKLSLP
Trigger: GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGT...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCATGGAGCCTCTTCCTaGAAAGTCTGCCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLHGASS*KVCLPR
Trigger: TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTCATGGAGCCTCTTCCTaGAAAGTCTGCCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPHGASS*KVCLPR
Trigger: TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATGGAGCCTCTTCCTaGAAAGTCTGCCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIHGASS*KVCLPR
Trigger: TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCGAAGCAGGAGCCACATaGAGCCTCTTCCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIEAGAT*SLFLES
Trigger: ACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTC...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCGAAGCAGGAGCCACATaGAGCCTCTTCCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LFLESLPAKSQRALPSIAEAGAT*SLFLES
Trigger: ACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTC...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCGTCTCCCTAAATGGGTaGGAAAGTGAAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIVSLNG*ESEAGA
Trigger: GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGAC...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATGTCTCCCTAAATGGGTaGGAAAGTGAAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHVSLNG*ESEAGA
Trigger: GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGAC...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp TGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGCCTCCAATTAGACCCTaGGAGCCACCTATAACTAAG +
Preference number: 4 (lower is better)
Translates to: CLPRAKGLYHPLPLQFTQPPIRP*EPPITK
Trigger: CTTAGTTATAGGTGGCTCCCAGGGTCTAATTGGAGG...CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGTTTCCAGGTCAAAGCTaGGGGTGGGTTTTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VCLPRAKGLYHPLPLQFTFPGQS*GWVFKK
Trigger: CTTCTTGAAAACCCACCCCCAGCTTTGACCTGGAAA...CGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR CCA 90 bp CCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCCCCTATAGCGCTGCATaGAAAAGAACCAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: PGKSACQEPKGFTIHCPCPYSAA*KRTKTR
Trigger: CCTTGTCTTGGTTCTTTTCCATGCAGCGCTATAGGG...GCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594465.7
CDS-3UTR CCA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAAACCTTCTGAGTAGCTaGGATTCTCAGGTGCACACC +
Preference number: 4 (lower is better)
Translates to: ATWSLFLESLPAKSQRALNLLSS*DSQVHT
Trigger: GGTGTGCACCTGAGAATCCCAGCTACTCAGAAGGTT...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAAGCCTCTCAAGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRSLSSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGCTACTTGAGAGGCT...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR TCA 90 bp TTTCCCCACTCACATTTCCATGCTCTTGCAGAGAGCCGCTTGGTAGAGGAAGACTCTGCAGGAGGGAGCTaGTTGCTGGATGAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: FPHSHFHALAESRLVEEDSAGGS*LLDEGF
Trigger: AAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGA...GTCTTCCTCTACCAAGCGGCTCTCTGCAAGAGCATGGAAATGTGAGTGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR TCA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTTTAGCTCCGCCACCTTaGACACATCAAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: SLFLESLPAKSQRALPSILAPPP*THQVPT
Trigger: AGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAA...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR TCA 90 bp CTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAATTAGCTCCGCCACCTTaGACACATCAAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: LLFFLLILFLCLLQSQFKLAPPP*THQVPT
Trigger: AGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAA...TTTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR TCA 90 bp ATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCAAGCCCACAGCCAGGTaGTGGTTCTCCAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: ITKSLIVSLNGWESEAGAKPTAR*WFSSTE
Trigger: CTCGGTGCTGGAGAACCATCACCTGGCTGTGGGCTT...GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp AGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACTTTGTCTCAACCTTCTaGGTAGCTGGGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLPAKSQRALPSIAPAVHFVSTF*VAGILR
Trigger: CCTGAGAATCCCAGCTACTCAGAAGGTTGAGACAAA...GTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAGCCGCTGCAGGCGGATaGTCTGATTCACCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PWEPPITKSLIVSLNGWEAAAGG*SDSPKA
Trigger: AGCTTTTGGTGAATCAGAGCATCCGCCTGCAGCGGC...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262805.16
CDS-3UTR GCA 90 bp TTTCCCCACTCACATTTCCATGCTCTTGCAGAGAGCCGCTTGGTAGAGGAAGACTCTTCCTGGAAAGTCTaGCTGCCAAGAGCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: FPHSHFHALAESRLVEEDSSWKV*LPRAKG
Trigger: CCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA...GTCTTCCTCTACCAAGCGGCTCTCTGCAAGAGCATGGAAATGTGAGTGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCGGCATCGTAAGAGGCTaGCCCTTAGAGAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LFLESLPAKSQRALPSIAGIVRG*PLESSF
Trigger: AAAAGAGCTCTCTAAGGGGCAGCCTCTTACGATGCC...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AGACCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGACTCCCCACCCTTTGTaGAGGGCTACTACAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RPWEPPITKSLIVSLNGWTPHPL*RATTEA
Trigger: TGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGT...CCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGAGGCACCCGCCACCATaGCCAGCCAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLRHPPP*PANFCI
Trigger: AATACAAAAATTGGCTGGGCATGGTGGCGGGTGCCT...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGATTCAAGCGATTCTCCTaGCTCAGCCTCTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRFKRFS*LSLSSS
Trigger: GCTACTTGAGAGGCTGAGGCAGGAGAATCGCTTGAA...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAATCCGAGACATGGCCTTaGGCGAGAGTTCATAGTCGC +
Preference number: 4 (lower is better)
Translates to: PWEPPITKSLIVSLNGWESETWP*ARVHSR
Trigger: GCGACTATGAACTCTCGCCCAAGGCCATGTCTCGGA...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp GCGTCGTTGTACATAAGCGCCAGCTCTGAGTTGGTGTTAATCAGAAACTGGTTGATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: ASLYISASSELVLIRNWLMYSDT*FPERLV
Trigger: AACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACAT...CAACCAGTTTCTGATTAACACCAACTCAGAGCTGGCGCTTATGTACAACGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGAGAGGCTGGCACTGTaGCAGAGCCCATGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: WEPPITKSLIVSLNGWESERLAL*QSPCRP
Trigger: TGGCCTACATGGGCTCTGCCACAGTGCCAGCCTCTC...ACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCAAGAGTCAGTTCAAACTaGAATCTGTCAGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPRVSSN*NLSGPS
Trigger: GGACGGGCCTGACAGATTCCAGTTTGAACTGACTCT...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTAGAGTCAGTTCAAACTaGAATCTGTCAGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPRVSSN*NLSGPS
Trigger: GGACGGGCCTGACAGATTCCAGTTTGAACTGACTCT...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp AGCTCCGCCACCTTGAACACATCAAGTCCCCACTTGTTGGTGTCTTCTAGCTCCAGAGTCAGTTCAAACTaGAATCTGTCAGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SSATLNTSSPHLLVSSSSRVSSN*NLSGPS
Trigger: GGACGGGCCTGACAGATTCCAGTTTGAACTGACTCT...GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGTGTTCAAGGTGGCGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CCA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCAGAGTCAGTTCAAACTaGAATCTGTCAGGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIRVSSN*NLSGPS
Trigger: GGACGGGCCTGACAGATTCCAGTTTGAACTGACTCT...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCACTCCAAGGCCTCTTTaGCTAAAGCTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPTPRPL*LKLSLP
Trigger: GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGT...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCAACTCCAAGGCCTCTTTaGCTAAAGCTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TWSLFLESLPAKSQRALPTPRPL*LKLSLP
Trigger: GGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGT...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCCTCCAATTAGACCCTaGGAGCCACCTATAACTAAG +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYPPIRP*EPPITK
Trigger: CTTAGTTATAGGTGGCTCCCAGGGTCTAATTGGAGG...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATACAGAAATTGTCCACTaGTCGCTGCTAAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHTEIVH*SLLNGG
Trigger: CCCTCCATTTAGCAGCGATCAGTGGACAATTTCTGT...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594465.7
CDS-3UTR TCA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCAGTGAAGCTTTGGTGCTaGAAATTTTCCCCACTCACA +
Preference number: 4 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPVKLWC*KFSPLT
Trigger: TGTGAGTGGGGAAAATTTTCAGCACCAAAGCTTCAC...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAACTCAGATCAGCACAGTaGACCAGGTTCTGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PWEPPITKSLIVSLNGWELRSAQ*TRFCKT
Trigger: GGTCTTGCAGAACCTGGTGCACTGTGCTGATCTGAG...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAACATTTCCATGCTCTTaGAGAGAGCCGCTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRTFPCS*REPLGR
Trigger: TCTACCAAGCGGCTCTCTGCAAGAGCATGGAAATGT...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp TTTCCCCACTCACATTTCCATGCTCTTGCAGAGAGCCGCTTGGTAGAGGAAGACTATTGTTGTTGTCGTTaGCCAGGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: FPHSHFHALAESRLVEEDYCCCR*PGWSAV
Trigger: CACTGCACTCCAGCCTGGGCAACGACAACAACAATA...GTCTTCCTCTACCAAGCGGCTCTCTGCAAGAGCATGGAAATGTGAGTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp AGACCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGTCAATGAAACCCACCTaGGACTTCTCCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RPWEPPITKSLIVSLNGWSMKPT*DFSTEA
Trigger: GGCCTCAGTGGAGAAGTCCCAGGTGGGTTTCATTGA...CCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp TGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTCAGTGCACCAGGTTCTaGAAGACCTGGATTCGGTCG +
Preference number: 4 (lower is better)
Translates to: WEPPITKSLIVSLNGWESQCTRF*KTWIRS
Trigger: CGACCGAATCCAGGTCTTGCAGAACCTGGTGCACTG...ACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR GCA 90 bp CCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCTTAACCCCAGATAAATaGTCAGTACCCCAAATGTCT +
Preference number: 4 (lower is better)
Translates to: PGKSACQEPKGFTIHCPCLTPDK*SVPQMS
Trigger: AGACATTTGGGGTACTGAGCATTTATCTGGGGTTAA...GCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CCA 90 bp TGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTCTCAAGAGTGACCACTaGAGAGGGTGGACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: WEPPITKSLIVSLNGWESLKSDH*RGWTRG
Trigger: GCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAG...ACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGACAAGGACTTGGAGTaGAGAAGACAGAAATTGTCC +
Preference number: 4 (lower is better)
Translates to: FLESLPAKSQRALPSIAPDKDLE*RRQKLS
Trigger: GGACAATTTCTGTCTTCTCCACTCCAAGTCCTTGTC...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594465.7
CDS-3UTR TCA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACAAAACTGGGTATGAGTaGAGCTTTGGTGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYKTGYE*SFGAEN
Trigger: ATTTTCAGCACCAAAGCTTCACTCATACCCAGTTTT...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR GCA 90 bp ATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCCAGGAGGGAGCTGATTaGTGGATGAAGGGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: ITKSLIVSLNGWESEAGAQEGAD*WMKGFR
Trigger: TCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTG...GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CCA 90 bp ATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCGGCCAGTGTGTCTGCTaGGATCTGGAATGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ITKSLIVSLNGWESEAGAGQCVC*DLECLQ
Trigger: CTGAAGACATTCCAGATCCCAGCAGACACACTGGCC...GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR TCA 90 bp TCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTTCTGTGAACACAGCCTaGAAAATGCTGAATATGATA +
Preference number: 4 (lower is better)
Translates to: SGNSKASLAKAVSSPSSSSVNTA*KMLNMI
Trigger: TATCATATTCAGCATTTTTCAGGCTGTGTTCACAGA...AGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598111.7
CDS-3UTR CCA 90 bp ATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCCCTCCAATTAGACCCTaGGAGCCACCTATAACTAAG +
Preference number: 4 (lower is better)
Translates to: ITKSLIVSLNGWESEAGAPPIRP*EPPITK
Trigger: CTTAGTTATAGGTGGCTCCCAGGGTCTAATTGGAGG...GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
3UTR CAA 72 bp CCAATTAGACCCTGGGAGCCACCTATAACTAAGAGCTaGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PIRPWEPPITKS*IVSLNGWESEA
Trigger: TGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGGTCTAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS GCA 90 bp GCAGGGAGCAGGACTCGTCCCCGTGAGCGGGCGCCGAGGAGCGTCTaGTCCCGGGTCCGGCCCAGGGCCGGGAGTGGAGGCGACAGCGAG +
Preference number: 5 (lower is better)
Translates to: AGSRTRPRERAPRSV*SRVRPRAGSGGDSE
Trigger: CTCGCTGTCGCCTCCACTCCCGGCCCTGGGCCGGACCCGGGAGCAGACGCTCCTCGGCGCCCGCTCACGGGGACGAGTCCTGCTCCCTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS TCA 90 bp CAAAGCGCCTGCAGGAGGAAACGGGCCAGGAGAGCCGCGACTTCCTaGGCTCCGGCCGCGGGCTCAGGTCCCTCTCGCGGCAGCCCGCGG +
Preference number: 5 (lower is better)
Translates to: QSACRRKRARRAATS*APAAGSGPSRGSPR
Trigger: CCGCGGGCTGCCGCGAGAGGGACCTGAGCCCGCGGCCGGAGCTCAGGAAGTCGCGGCTCTCCTGGCCCGTTTCCTCCTGCAGGCGCTTTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS TCA 90 bp CCAGAGAAAGGGGTCTGGGATAGCAGGGAGCAGGACTCGTCCCCGTaGGCGGGCGCCGAGGAGCGTCTGCTCCCGGGTCCGGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PEKGVWDSREQDSSP*AGAEERLLPGPAQG
Trigger: GCCCTGGGCCGGACCCGGGAGCAGACGCTCCTCGGCGCCCGCTCACGGGGACGAGTCCTGCTCCCTGCTATCCCAGACCCCTTTCTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS CCA 90 bp AGGGTTTCCGACGGGTCCCTGCCTGCGGTACAGCAGCCTCAGGCGTaGCTGCTCCGCCCATCTCGCCCCGCCCCCAAGTCCACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RVSDGSLPAVQQPQA*LLRPSRPAPKSTRP
Trigger: GGGCCTGGTGGACTTGGGGGCGGGGCGAGATGGGCGGAGCAGCCACGCCTGAGGCTGCTGTACCGCAGGCAGGGACCCGTCGGAAACCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 90 bp CCCAGAGGGGTGGACCGAGTGCTTAGAGGATGCAGCGCAAGCAGCTaGCGGGCGCAGGCGCGCGCTCAGCCTGGGACTCCCGAACGCCCT +
Preference number: 5 (lower is better)
Translates to: PRGVDRVLRGCSASS*RAQARAQPGTPERP
Trigger: AGGGCGTTCGGGAGTCCCAGGCTGAGCGCGCGCCTGCGCCCGGCAGCTGCTTGCGCTGCATCCTCTAAGCACTCGGTCCACCCCTCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS GCA 90 bp GCTTGGCTGCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTTaGTCCGAACGGTCCGCAGACTGGCCAGGACCTGGGCAAAGGGCG +
Preference number: 5 (lower is better)
Translates to: AWLLLGIAGGQGPPR*SERSADWPGPGQRA
Trigger: CGCCCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000610023.1
CDS GCA 90 bp AGGCAGGGATTCGAACCCAGAGGGGTGGACCGAGTGCTTAGAGGATaGAGCGCAAGCAGCTGCCGGGCGCAGGCGCGCGCTCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: RQGFEPRGVDRVLRG*SASSCRAQARAQPG
Trigger: CCCAGGCTGAGCGCGCGCCTGCGCCCGGCAGCTGCTTGCGCTGCATCCTCTAAGCACTCGGTCCACCCCTCTGGGTTCGAATCCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS GCA 90 bp GGGCTCTGGTCATGCTGTGGCGGCCGCGAGAGCGACTCAACCTGCTaGAAGCCTCTGCCCCTTCGCCGACCCCCAGGTTCTCCATGCGCC +
Preference number: 5 (lower is better)
Translates to: GLWSCCGGRESDSTC*KPLPLRRPPGSPCA
Trigger: GGCGCATGGAGAACCTGGGGGTCGGCGAAGGGGCAGAGGCTTGCAGCAGGTTGAGTCGCTCTCGCGGCCGCCACAGCATGACCAGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS CCA 90 bp GCCGCCACGTTGCTCCGAACGGTCCGCAGACTGGCCAGGACCTGTTaGGAGGAGGTGGTAGGCGGTGGGAAGGAGAGGCCGGATCCGGAG +
Preference number: 5 (lower is better)
Translates to: AATLLRTVRRLARTC*EEVVGGGKERPDPE
Trigger: CTCCGGATCCGGCCTCTCCTTCCCACCGCCTACCACCTCCTCCCAACAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597297.1
CDS GCA 90 bp ACTTGGCTGCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTTaGTCCGAACGGTCCGCAGACTGGCCAGGACCTGGGCAAAGGGCG +
Preference number: 5 (lower is better)
Translates to: TWLLLGIAGGQGPPR*SERSADWPGPGQRA
Trigger: CGCCCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 90 bp CTTTGGCTGCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTTaGTCCGAACGGTCCGCAGACTGGCCAGGACCTGGGCAAAGGGCG +
Preference number: 5 (lower is better)
Translates to: LWLLLGIAGGQGPPR*SERSADWPGPGQRA
Trigger: CGCCCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS CCA 90 bp CTCCCGGCCGAGGGCCAGTGTCCGGCTGGTCCCGGCCAAGACTTTTaGGTCAAAGGTCACCGTATCCCCGTCCACGAGCTGGGTCGGCAC +
Preference number: 5 (lower is better)
Translates to: LPAEGQCPAGPGQDF*VKGHRIPVHELGRH
Trigger: GTGCCGACCCAGCTCGTGGACGGGGATACGGTGACCTTTGACCCAAAAGTCTTGGCCGGGACCAGCCGGACACTGGCCCTCGGCCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS CCA 90 bp AGGATGCAGCGCAAGCAGCTGCCGGGCGCAGGCGCGCGCTCAGCCTaGGACTCCCGAACGCCCTGCCTCGAAAACCCCCTCAATTCAGGT +
Preference number: 5 (lower is better)
Translates to: RMQRKQLPGAGARSA*DSRTPCLENPLNSG
Trigger: ACCTGAATTGAGGGGGTTTTCGAGGCAGGGCGTTCGGGAGTCCCAGGCTGAGCGCGCGCCTGCGCCCGGCAGCTGCTTGCGCTGCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS GCA 90 bp GGTCAAAGCAAGTGGGTGCCAATTCGGCGCGGACCAAGCGCAGGATaGCAGCCACAGTCGGCGCCCACAAGCCCCACTCCGAACCCCAGC +
Preference number: 5 (lower is better)
Translates to: GQSKWVPIRRGPSAG*QPQSAPTSPTPNPS
Trigger: GCTGGGGTTCGGAGTGGGGCTTGTGGGCGCCGACTGTGGCTGGCATCCTGCGCTTGGTCCGCGCCGAATTGGCACCCACTTGCTTTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS GCA 90 bp CATGCTGTGGCGGCCGCGAGAGCGACTCAACCTGCTGCAAGCCTCTaGCCCTTCGCCGACCCCCAGGTTCTCCATGCGCCAGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: HAVAAARATQPAASL*PFADPQVLHAPEKG
Trigger: CCCTTTCTCTGGCGCATGGAGAACCTGGGGGTCGGCGAAGGGGCAGAGGCTTGCAGCAGGTTGAGTCGCTCTCGCGGCCGCCACAGCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS GCA 90 bp GAGGGAGCTGATTGCTGGATGAAGGGTTTCCGACGGGTCCCTGCCTaGGGTACAGCAGCCTCAGGCGTGGCTGCTCCGCCCATCTCGCCC +
Preference number: 5 (lower is better)
Translates to: EGADCWMKGFRRVPA*GTAASGVAAPPISP
Trigger: GGGCGAGATGGGCGGAGCAGCCACGCCTGAGGCTGCTGTACCGCAGGCAGGGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CCA 90 bp GACCGCCTGAGACTCGGAGCTCCCGGCCGAGGGCCAGTGTCCGGCTaGTCCCGGCCAAGACTTTTGGGTCAAAGGTCACCGTATCCCCGT +
Preference number: 5 (lower is better)
Translates to: DRLRLGAPGRGPVSG*SRPRLLGQRSPYPR
Trigger: ACGGGGATACGGTGACCTTTGACCCAAAAGTCTTGGCCGGGACCAGCCGGACACTGGCCCTCGGCCGGGAGCTCCGAGTCTCAGGCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS GCA 90 bp AATTGGCTGCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTTaGTCCGAACGGTCCGCAGACTGGCCAGGACCTGTTGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: NWLLLGIAGGQGPPR*SERSADWPGPVGRR
Trigger: CCTCCTCCCAACAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597297.1
CDS TCA 90 bp TTGGGCAGCTCCACCTCGGTCTGCTGGTCTGCGGATGGGCCAGGGTaGAGCTCAGAGAAGCCGATTTCACCTGCTGGGGCCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LGSSTSVCWSADGPG*SSEKPISPAGAWPQ
Trigger: CTGAGGCCAGGCCCCAGCAGGTGAAATCGGCTTCTCTGAGCTTCACCCTGGCCCATCCGCAGACCAGCAGACCGAGGTGGAGCTGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CCA 90 bp AGCGGTCACCTTGGGCAGCTCCACCTCGGTCTGCTGGTCTGCGGATaGGCCAGGGTGAAGCTCAGAGAAGCCGATTTCACCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SGHLGQLHLGLLVCG*ARVKLREADFTCWG
Trigger: GCCCCAGCAGGTGAAATCGGCTTCTCTGAGCTTCACCCTGGCCCATCCGCAGACCAGCAGACCGAGGTGGAGCTGCCCAAGGTGACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS-3UTR CAA 90 bp CTGTCAGGCCCGTCCCGCTCGGGGTTGGTGAGGTCTGAGGGACTTCGGGGGATCAGGATCCGCTTGAACTaGTTGGAGGCCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: LSGPSRSGLVRSEGLRGIRIRLN*LEAISP
Trigger: GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCT...GATCCCCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGGGCCTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR CAA 90 bp CTGTCAGGCCCGTCCCGCTCGGGGTTGGTGAGGTCTGAGGGACTTCGGGGGATCTGGTACCACTCTCGATaGTCCTCCAGCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LSGPSRSGLVRSEGLRGIWYHSR*SSSVSS
Trigger: GCTGGACACGCTGGAGGACAATCGAGAGTGGTACCA...GATCCCCCGAAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGGGCCTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS GCA 90 bp CTCCTCAGCGGTCACCTTGGGCAGCTCCACCTCGGTCTGCTGGTCTaGGGATGGGCCAGGGTGAAGCTCAGAGAAGCCGATTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: LLSGHLGQLHLGLLV*GWARVKLREADFTC
Trigger: GCAGGTGAAATCGGCTTCTCTGAGCTTCACCCTGGCCCATCCGCAGACCAGCAGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CCA 90 bp AACCCCATCGCTACCAGGAAGGTCCGGGAGATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTTTCGGACAGGTGGGTCAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: NPIATRKVREMYSDT*FPERLVSDRWVNSR
Trigger: CCGGGAGTTGACCCACCTGTCCGAAACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACATCTCCCGGACCTTCCTGGTAGCGATGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS-3UTR CAA 90 bp CCCCCACCGAGTGCCGGGTCTGCAGCGTCTCCAACTGATCCAGGCACCAGTCCAATCCGCTTGAACTTGTaGGAGGCCATCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: PPPSAGSAASPTDPGTSPIRLNL*EAISPT
Trigger: GGTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGAT...TGGACTGGTGCCTGGATCAGTTGGAGACGCTGCAGACCCGGCACTCGGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR CAA 90 bp GCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCCCGTCCCGCTCGGGGTaGGTGAGGTCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: AGFRGQEFSVRQLQGLFGPSRSG*VRSEGL
Trigger: AAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGG...GCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS CCA 90 bp GGTCACAGTCGTTTCTGGAAAGGCAGGGATTCGAACCCAGAGGGGTaGACCGAGTGCTTAGAGGATGCAGCGCAAGCAGCTGCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: GHSRFWKGRDSNPEG*TECLEDAAQAAAGR
Trigger: GCGCCCGGCAGCTGCTTGCGCTGCATCCTCTAAGCACTCGGTCCACCCCTCTGGGTTCGAATCCCTGCCTTTCCAGAAACGACTGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS-3UTR CAA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRARAAT*LRTVRR
Trigger: TCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGC...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GACAGCACCTCTCCTCACAGGGATAGAAGCCCAGGAGAAAGACACCAGGGCATCGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: DSTSPHRDRSPGERHQGIARAAT*LRTVRR
Trigger: TCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGC...GATGCCCTGGTGTCTTTCTCCTGGGCTTCTATCCCTGTGAGGAGAGGTGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp CCCCCACCGAGTGCCGGGTCTGCAGCGTCTCCAACTGATCCAGGCACCAGTCCACGGTTCAGGATCCGCTaGAACTTGTTGGAGGCCATC +
Preference number: 5 (lower is better)
Translates to: PPPSAGSAASPTDPGTSPRFRIR*NLLEAI
Trigger: GATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCG...TGGACTGGTGCCTGGATCAGTTGGAGACGCTGCAGACCCGGCACTCGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR CAA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFARAAT*LRTVRR
Trigger: TCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGC...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCACCGACGGGTCCCTGCTaGGCTGCTCCTAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: LPAKSQRALPSIAPAVHAPTGPC*AAPRHC
Trigger: GCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGG...TGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp ATCTGGACCCTGAAACTGTTCCCACGGGGGCCACCCAGGACTCCTGGACCCAAGATCCGCTTGAACTTGTaGGAGGCCATCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: IWTLKLFPRGPPRTPGPKIRLNL*EAISPT
Trigger: GGTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGAT...CTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAACAGTTTCAGGGTCCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595343.5
CDS-3UTR CAA 90 bp GACCCTGAAACTGTTCCCACGGGGGCCACCCAGGACTCCTGGACCCAAGTTCCAAGGATCCGCTTGAACTaGTTGGAGGCCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: DPETVPTGATQDSWTQVPRIRLN*LEAISP
Trigger: GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCT...TGGAACTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAACAGTTTCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595343.5
CDS-3UTR CAA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTCCGTCCCGCTCGGGGTaGGTGAGGTCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLPSRSG*VRSEGL
Trigger: AAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGG...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGGGTCAACTCCCGGTTCAGGATCCGCTTGAACTTGTTGGAGGCCATCTCCCCCTTTGCAGGGGCGGGGTaGGCTGCTCCTAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: WVNSRFRIRLNLLEAISPFAGAG*AAPRHC
Trigger: GCAATGCCTAGGAGCAGCCAACCCCGCCCCTGCAAA...GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCGGGAGTTGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593594.1
CDS GCA 90 bp GCCACCCAGGACTCCTGGACCCAAGTTCCAGATCTGTTCCCCGAGTaGCTGTGTGACCATGAGATCTCTGGGCCTCAGCCTCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: ATQDSWTQVPDLFPE*LCDHEISGPQPPHL
Trigger: CAGATGAGGAGGCTGAGGCCCAGAGATCTCATGGTCACACAGGCACTCGGGGAACAGATCTGGAACTTGGGTCCAGGAGTCCTGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593594.1
ENST00000597360.5
ENST00000597573.1
CDS-3UTR CAA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRARAAT*LRTVRR
Trigger: TCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGC...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGCCGACGGGTCCCTGCTaGGCTGCTCCTAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQPTGPC*AAPRHC
Trigger: GCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGG...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp GCCGGCTTCAGGGGACAGGAGTTCAGTGTCAGGCAACTCCAAGGCCTCTTTGGCGGACTTCGGGGGATCTaGCTCTGGTACCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: AGFRGQEFSVRQLQGLFGGLRGI*LWYHSR
Trigger: TCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCC...GCCAAAGAGGCCTTGGAGTTGCCTGACACTGAACTCCTGTCCCCTGAAGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTCCGTCCCGCTCGGGGTaGGTGAGGTCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFPSRSG*VRSEGL
Trigger: AAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGG...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCCGTCCCGCTCGGGGTaGGTGAGGTCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLPSRSG*VRSEGL
Trigger: AAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGG...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTCCGTCCCGCTCGGGGTaGGTGAGGTCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: VSGNSKASLAKAVSSPSSPSRSG*VRSEGL
Trigger: AAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGG...AGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTCGAATAGAAGCGCTGTaGGATGCGGATGGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: CQEPKGFTIHCPCSSRRARIEAL*DADGAP
Trigger: CGGCGCCCCATCCGCATCCAACAGCGCTTCTATTCG...AGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp CTGAAACTGTTCCCACGGGGGCCACCCAGGACTCCTGGACCCAAGTTCCAGATCCCTCAGCCTCCTCATTaGGCTGCTCCTAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: LKLFPRGPPRTPGPKFQIPQPPH*AAPRHC
Trigger: GCAATGCCTAGGAGCAGCCAAATGAGGAGGCTGAGG...GATCTGGAACTTGGGTCCAGGAGTCCTGGGTGGCCCCCGTGGGAACAGTTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595343.5
CDS TCA 90 bp GGAAGGAACAGGTACTTTACCTGCAGGAGGGAGCTGATTGCTGGATaGAGGGTTTCCGACGGGTCCCTGCCTGCGGTACAGCAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GRNRYFTCRRELIAG*RVSDGSLPAVQQPQ
Trigger: CTGAGGCTGCTGTACCGCAGGCAGGGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGGTAAAGTACCTGTTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 90 bp GCCACCCAGGACTCCTGGACCCAAGTTCCAGATCTGTTCCCCGAGTaGCTGTGTGACCATGAGATCTCTGGGCCTCAGCCTCCTCATTTG +
Preference number: 5 (lower is better)
Translates to: ATQDSWTQVPDLFPE*LCDHEISGPQPPHL
Trigger: CAAATGAGGAGGCTGAGGCCCAGAGATCTCATGGTCACACAGGCACTCGGGGAACAGATCTGGAACTTGGGTCCAGGAGTCCTGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595343.5
CDS-3UTR CAA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: SLFLESLPAKSQRALPSIARAAT*LRTVRR
Trigger: TCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGC...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCAGGATCCGCTTGAACTaGTTGGAGGCCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: RSHMEPLPGKSACQEPKGRIRLN*LEAISP
Trigger: GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCT...GCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGGGTCAACTCCCGGTTCAGGATCCGCTTGAACTTGTTGGAGGCCATCTCCCCCAGGATCCGCTTGAACTaGTTGGAGGCCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: WVNSRFRIRLNLLEAISPRIRLN*LEAISP
Trigger: GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCT...GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCGGGAGTTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593594.1
ENST00000595343.5
CDS-3UTR CAA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGTGTCTTCTAGCTCCTaGGCCAGTTGCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: AGATWSLFLESLPAKSQRVSSSS*ASCSSW
Trigger: CCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACAC...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCAGACTCAGTCGCTGCTaGGCGCTGAGGTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LPRAKGLYHPLPLQFTQGRLSRC*ALRFWK
Trigger: CTTCCAGAACCTCAGCGCCAAGCAGCGACTGAGTCT...GCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCTGGTACCACTCTCGATaGTCCTCCAGCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: QEPKGFTIHCPCSSRRAGWYHSR*SSSVSS
Trigger: GCTGGACACGCTGGAGGACAATCGAGAGTGGTACCA...GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCACCGTCCCGCTCGGGGTaGGTGAGGTCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: TWSLFLESLPAKSQRALPPSRSG*VRSEGL
Trigger: AAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGG...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCCCGTCCCGCTCGGGGTaGGTGAGGTCTGAGGGACTT +
Preference number: 5 (lower is better)
Translates to: KVCLPRAKGLYHPLPLQFPSRSG*VRSEGL
Trigger: AAGTCCCTCAGACCTCACCAACCCCGAGCGGGACGG...GAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGGGGCTTTACCATCCATaGCCCCTGCAGTTCACGCAG +
Preference number: 5 (lower is better)
Translates to: PAKSQRALPSIAPAVHAGGLYHP*PLQFTQ
Trigger: CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCC...CCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCTCTGCCCCGTGTCCTTaGGCTGCTCCTAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: PGKSACQEPKGFTIHCPCSAPCP*AAPRHC
Trigger: GCAATGCCTAGGAGCAGCCAAAGGACACGGGGCAGA...GCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539010.5
ENST00000599188.5
CDS CCA 90 bp ACTTGGAGTGGAGAAGACAGAAATTGTCCACTGATCGCTGCTAAATaGAGGGCAGGGAGACAGGGTCTCAGGAGACCCCCGGGGCCGAGA +
Preference number: 5 (lower is better)
Translates to: TWSGEDRNCPLIAAK*RAGRQGLRRPPGPR
Trigger: TCTCGGCCCCGGGGGTCTCCTGAGACCCTGTCTCCCTGCCCTCCATTTAGCAGCGATCAGTGGACAATTTCTGTCTTCTCCACTCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594465.7
CDS-3UTR CAA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTAGGATCCGCTTGAACTaGTTGGAGGCCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLRIRLN*LEAISP
Trigger: GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCT...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TCTCCTGACTCCCCACCCTTTGTGCAGGGCTACTACAGAGGCAGAAAGCTGGCAAGGATCCGCTTGAACTaGTTGGAGGCCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SPDSPPFVQGYYRGRKLARIRLN*LEAISP
Trigger: GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCT...TGCCAGCTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CAA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGCGGTTCAGGATCCGCTaGAACTTGTTGGAGGCCATC +
Preference number: 5 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLRFRIR*NLLEAI
Trigger: GATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCG...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCCGGTTCAGGATCCGCTaGAACTTGTTGGAGGCCATC +
Preference number: 5 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSRFRIR*NLLEAI
Trigger: GATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCG...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAGTGTCTTCTAGCTCCTaGGCCAGTTGCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPVSSSS*ASCSSW
Trigger: CCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACAC...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp AGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCGTGTCTTCTAGCTCCTaGGCCAGTTGCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SEAGATWSLFLESLPAKSVSSSS*ASCSSW
Trigger: CCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACAC...GCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp GTCTGCTGGTCCAGGAAGGTCCGGGAGATGTACTCGGACACCTGGTTCCCGGAGTCAAGTCCCCACTTGTaGGTGTCTTCTAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: VCWSRKVREMYSDTWFPESSPHL*VSSSSL
Trigger: CAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGA...CTCCGGGAACCAGGTGTCCGAGTACATCTCCCGGACCTTCCTGGACCAGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598111.7
CDS-3UTR CAA 90 bp GCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGCTTAGCTCCGCCACCTaGAACACATCAAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: AKSQRALPSIAPAVHAGLLSSAT*NTSSPH
Trigger: GTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAG...CAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGACTCAGTCGCTGCTaGGCGCTGAGGTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PGKSACQEPKGFTIHCPCRLSRC*ALRFWK
Trigger: CTTCCAGAACCTCAGCGCCAAGCAGCGACTGAGTCT...GCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TTGGTGTCTTCTAGCTCCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAGACTCAGTCGCTGCTaGGCGCTGAGGTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LVSSSSLASCSSWSVWTPRLSRC*ALRFWK
Trigger: CTTCCAGAACCTCAGCGCCAAGCAGCGACTGAGTCT...TGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCTGGTACCACTCTCGATaGTCCTCCAGCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PGKSACQEPKGFTIHCPCWYHSR*SSSVSS
Trigger: GCTGGACACGCTGGAGGACAATCGAGAGTGGTACCA...GCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCTGGTACCACTCTCGATaGTCCTCCAGCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRWYHSR*SSSVSS
Trigger: GCTGGACACGCTGGAGGACAATCGAGAGTGGTACCA...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCGGACTTCGGGGGATCTaGCTCTGGTACCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: SACQEPKGFTIHCPCSSRGLRGI*LWYHSR
Trigger: TCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCC...GCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGACTTCGGGGGATCTaGCTCTGGTACCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: CQEPKGFTIHCPCSSRRAGLRGI*LWYHSR
Trigger: TCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCC...AGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CCTTGGCCAGTTGCTCCTCCTGGTCAGTCTGGACCCCAAAGCGTGGGACAGTGGAACTCCAAGGCCTCTTaGGCTAAAGCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PWPVAPPGQSGPQSVGQWNSKAS*AKAVSS
Trigger: GGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTT...CCACTGTCCCACGCTTTGGGGTCCAGACTGACCAGGAGGAGCAACTGGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGGCTTTACCATCCATaGCCCCTGCAGTTCACGCAG +
Preference number: 5 (lower is better)
Translates to: CQEPKGFTIHCPCSSRRAGLYHP*PLQFTQ
Trigger: CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCC...AGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GTGTCAGGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTGCCCCGTGTCCTTaGGCTGCTCCTAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: VSGNSKASLAKAVSSPSSSAPCP*AAPRHC
Trigger: GCAATGCCTAGGAGCAGCCAAAGGACACGGGGCAGA...AGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCCTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR CAA 90 bp TCTCCTGACTCCCCACCCTTTGTGCAGGGCTACTACAGAGGCAGAAAGCTGGCAGACAGGGAGATGCCTTaGGGATGGTCTCCTGACTCC +
Preference number: 5 (lower is better)
Translates to: SPDSPPFVQGYYRGRKLADREMP*GWSPDS
Trigger: GGAGTCAGGAGACCATCCCAAAGGCATCTCCCTGTC...TGCCAGCTTTCTGCCTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CAA 90 bp AAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAATCCGCTTGAACTTGTaGGAGGCCATCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: KQEPHGASSWKVCLPRAKIRLNL*EAISPT
Trigger: GGTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGAT...TTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAATCCGCTTGAACTTGTaGGAGGCCATCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: LESLPAKSQRALPSIAPAIRLNL*EAISPT
Trigger: GGTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGAT...TGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCCGCTTGAACTTGTaGGAGGCCATCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: WSLFLESLPAKSQRALPSIRLNL*EAISPT
Trigger: GGTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGAT...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGAGGATCCGCTTGAACTaGTTGGAGGCCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: WKVCLPRAKGLYHPLPLQRIRLN*LEAISP
Trigger: GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCT...CTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCGGTTCAGGATCCGCTaGAACTTGTTGGAGGCCATC +
Preference number: 5 (lower is better)
Translates to: VCLPRAKGLYHPLPLQFTRFRIR*NLLEAI
Trigger: GATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCG...CGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GTGGCCAGCACCATGTCAATGACCATCCTGCGCAGACTCAGTCGCTGCTTGGCGACATCAAGTCCCCACTaGTTGGTGTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: VASTMSMTILRRLSRCLATSSPH*LVSSSS
Trigger: GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGT...CGCCAAGCAGCGACTGAGTCTGCGCAGGATGGTCATTGACATGGTGCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GCAAGACCTGGATTCGGTCGGAATAGTTGTCCAGGAGGAGGACACCGAGGCTTGCTTAGCTCCGCCACCTaGAACACATCAAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ARPGFGRNSCPGGGHRGLLSSAT*NTSSPH
Trigger: GTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAG...CAAGCCTCGGTGTCCTCCTCCTGGACAACTATTCCGACCGAATCCAGGTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCAGACTCAGTCGCTGCTaGGCGCTGAGGTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: HMEPLPGKSACQEPKGFTRLSRC*ALRFWK
Trigger: CTTCCAGAACCTCAGCGCCAAGCAGCGACTGAGTCT...GGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTTGGTACCACTCTCGATaGTCCTCCAGCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFWYHSR*SSSVSS
Trigger: GCTGGACACGCTGGAGGACAATCGAGAGTGGTACCA...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCGGACTTCGGGGGATCTaGCTCTGGTACCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: WSLFLESLPAKSQRALPSGLRGI*LWYHSR
Trigger: TCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCC...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GGCAACTCCAAGGCCTCTTTGGCTAAAGCTGTCTCTTCCCCCTCCTCTTCTTCCGGACTTCGGGGGATCTaGCTCTGGTACCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: GNSKASLAKAVSSPSSSSGLRGI*LWYHSR
Trigger: TCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCC...GGAAGAAGAGGAGGGGGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGGGCTTTACCATCCATaGCCCCTGCAGTTCACGCAG +
Preference number: 5 (lower is better)
Translates to: ATWSLFLESLPAKSQRALGLYHP*PLQFTQ
Trigger: CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCC...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTCGAATAGAAGCGCTGTaGGATGCGGATGGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: SLFLESLPAKSQRALPSIRIEAL*DADGAP
Trigger: CGGCGCCCCATCCGCATCCAACAGCGCTTCTATTCG...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp GTGCACCAGGTTCTGCAAGACCTGGATTCGGTCGGAATAGTTGTCCAGGAGGAGCGGTTCAGGATCCGCTaGAATTGGCTGCTCCTAGGC +
Preference number: 5 (lower is better)
Translates to: VHQVLQDLDSVGIVVQEERFRIR*NWLLLG
Trigger: GCCTAGGAGCAGCCAATTCAAGCGGATCCTGAACCG...CTCCTCCTGGACAACTATTCCGACCGAATCCAGGTCTTGCAGAACCTGGTGCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598111.7
CDS-3UTR CAA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCATCCGCTTGAACTTGTaGGAGGCCATCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIIRLNL*EAISPT
Trigger: GGTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGAT...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCAGGATCCGCTTGAACTaGTTGGAGGCCATCTCCCCC +
Preference number: 5 (lower is better)
Translates to: LFLESLPAKSQRALPSIARIRLN*LEAISP
Trigger: GGGGGAGATGGCCTCCAACAAGTTCAAGCGGATCCT...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCGTGTCTTCTAGCTCCTaGGCCAGTTGCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSWKVCLPRAKGLYHPLPVSSSS*ASCSSW
Trigger: CCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACAC...GGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGTGTCTTCTAGCTCCTaGGCCAGTTGCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FLESLPAKSQRALPSIAPVSSSS*ASCSSW
Trigger: CCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACAC...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGTGTCTTCTAGCTCCTaGGCCAGTTGCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KVKQEPHGASSWKVCLPRVSSSS*ASCSSW
Trigger: CCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACAC...TCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp CAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGCTCAAGTCCCCACTTGTaGGTGTCTTCTAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: QEPKGFTIHCPCSSRRAGSSPHL*VSSSSL
Trigger: CAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGA...GCCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCACATCAAGTCCCCACTaGTTGGTGTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: RSHMEPLPGKSACQEPKGTSSPH*LVSSSS
Trigger: GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGT...GCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGACATCAAGTCCCCACTaGTTGGTGTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PRAKGLYHPLPLQFTQGWTSSPH*LVSSSS
Trigger: GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGT...CCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACTTAGCTCCGCCACCTaGAACACATCAAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ATWSLFLESLPAKSQRALLSSAT*NTSSPH
Trigger: GTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAG...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCAGCGCCAGCTCTGAGTaGGTGTTAATCAGAAACTGG +
Preference number: 5 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSSASSE*VLIRNW
Trigger: CCAGTTTCTGATTAACACCAACTCAGAGCTGGCGCT...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp GCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGAGCGCCAGCTCTGAGTaGGTGTTAATCAGAAACTGG +
Preference number: 5 (lower is better)
Translates to: AGATWSLFLESLPAKSQRSASSE*VLIRNW
Trigger: CCAGTTTCTGATTAACACCAACTCAGAGCTGGCGCT...CCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGAGCGCCAGCTCTGAGTaGGTGTTAATCAGAAACTGG +
Preference number: 5 (lower is better)
Translates to: ACQEPKGFTIHCPCSSRRSASSE*VLIRNW
Trigger: CCAGTTTCTGATTAACACCAACTCAGAGCTGGCGCT...CCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGAGACTCAGTCGCTGCTaGGCGCTGAGGTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLRLSRC*ALRFWK
Trigger: CTTCCAGAACCTCAGCGCCAAGCAGCGACTGAGTCT...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTAGACTCAGTCGCTGCTaGGCGCTGAGGTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: FLESLPAKSQRALPSIAPRLSRC*ALRFWK
Trigger: CTTCCAGAACCTCAGCGCCAAGCAGCGACTGAGTCT...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTAGGAGGTTCATGTGTTaGGACATGTCTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLRRFMC*DMSVAS
Trigger: GCTGGCCACAGACATGTCCAAACACATGAACCTCCT...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GGGAAAGTGAAGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGGAGGTTCATGTGTTaGGACATGTCTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GKVKQEPHGASSWKVCLPRRFMC*DMSVAS
Trigger: GCTGGCCACAGACATGTCCAAACACATGAACCTCCT...TGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCTTCACTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp ATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCTGGTACCACTCTCGATaGTCCTCCAGCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: MEPLPGKSACQEPKGFTIWYHSR*SSSVSS
Trigger: GCTGGACACGCTGGAGGACAATCGAGAGTGGTACCA...GATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp ACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCAGGACTTCGGGGGATCTaGCTCTGGTACCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: TWSLFLESLPAKSQRALPGLRGI*LWYHSR
Trigger: TCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCC...TGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATGGGCTTTACCATCCATaGCCCCTGCAGTTCACGCAG +
Preference number: 5 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHGLYHP*PLQFTQ
Trigger: CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCC...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CCCCCACACCTCGTCGGAGTTTATCCAAGTACTAGGATCAGGTTACAGAGGGGAGGGCTTTACCATCCATaGCCCCTGCAGTTCACGCAG +
Preference number: 5 (lower is better)
Translates to: PPHLVGVYPSTRIRLQRGGLYHP*PLQFTQ
Trigger: CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCC...TCCCCTCTGTAACCTGATCCTAGTACTTGGATAAACTCCGACGAGGTGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CAA 90 bp GAGGGTGGACTAGAGGCTCCAGCAGACAGCACCTCTCCTCACAGGGATAGAAGCATAAGCCACTATGCCTaGCCCAGCCCTTCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: EGGLEAPADSTSPHRDRSISHYA*PSPSFL
Trigger: CAGAAAAGAAGGGCTGGGCAAGGCATAGTGGCTTAT...GCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTAGTCCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CAA 90 bp CCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGTTATTGTTGTTGTCGTaGCCCAGGCTGGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: PRAKGLYHPLPLQFTQGWLLLLS*PRLECS
Trigger: ACTGCACTCCAGCCTGGGCAACGACAACAACAATAA...CCAGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CAA 90 bp AGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCAGCCCCCTCTTTTTATaGTTGTTGTCGTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RSHMEPLPGKSACQEPKGSPLFL*LLSLPR
Trigger: CCTGGGCAACGACAACAACAATAAAAAGAGGGGGCT...GCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CAA 90 bp ATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGAAGCAGGAGCCCCGACGGGTCCCTGCTaGGCTGCTCCTAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: ITKSLIVSLNGWESEAGAPTGPC*AAPRHC
Trigger: GCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGG...GGCTCCTGCTTCACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp TGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTCCGACGGGTCCCTGCTaGGCTGCTCCTAGGCATTGC +
Preference number: 5 (lower is better)
Translates to: WEPPITKSLIVSLNGWESPTGPC*AAPRHC
Trigger: GCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGG...ACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTATCCGCTTGAACTTGTaGGAGGCCATCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: SLFLESLPAKSQRALPSIIRLNL*EAISPT
Trigger: GGTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGAT...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCGGTTCAGGATCCGCTaGAACTTGTTGGAGGCCATC +
Preference number: 5 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLRFRIR*NLLEAI
Trigger: GATGGCCTCCAACAAGTTCAAGCGGATCCTGAACCG...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAAGTGTCTTCTAGCTCCTaGGCCAGTTGCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LLFFLLILFLCLLQSQFKVSSSS*ASCSSW
Trigger: CCAGGAGGAGCAACTGGCCAAGGAGCTAGAAGACAC...TTTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATCTTAGCTCCGCCACCTaGAACACATCAAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: EPLPGKSACQEPKGFTIHLSSAT*NTSSPH
Trigger: GTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAG...ATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACTTAGCTCCGCCACCTaGAACACATCAAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: KSACQEPKGFTIHCPCSSLSSAT*NTSSPH
Trigger: GTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAG...TGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCTTAGCTCCGCCACCTaGAACACATCAAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVLSSAT*NTSSPH
Trigger: GTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAG...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTAGCGCCAGCTCTGAGTaGGTGTTAATCAGAAACTGG +
Preference number: 5 (lower is better)
Translates to: CQEPKGFTIHCPCSSRRASASSE*VLIRNW
Trigger: CCAGTTTCTGATTAACACCAACTCAGAGCTGGCGCT...AGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAGGAGGTTCATGTGTTaGGACATGTCTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFRRFMC*DMSVAS
Trigger: GCTGGCCACAGACATGTCCAAACACATGAACCTCCT...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGAGGAGGTTCATGTGTTaGGACATGTCTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SWKVCLPRAKGLYHPLPLRRFMC*DMSVAS
Trigger: GCTGGCCACAGACATGTCCAAACACATGAACCTCCT...CAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCAGGAGGTTCATGTGTTaGGACATGTCTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: WSLFLESLPAKSQRALPSRRFMC*DMSVAS
Trigger: GCTGGCCACAGACATGTCCAAACACATGAACCTCCT...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTTGGTACCACTCTCGATaGTCCTCCAGCGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLFLESLPAKSQRALPSIWYHSR*SSSVSS
Trigger: GCTGGACACGCTGGAGGACAATCGAGAGTGGTACCA...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGCAGGAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGAACTCCAAGGCCTCTTaGGCTAAAGCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SRSHMEPLPGKSACQEPKNSKAS*AKAVSS
Trigger: GGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTT...CTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GAGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTAACTCCAAGGCCTCTTaGGCTAAAGCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: EPHGASSWKVCLPRAKGLNSKAS*AKAVSS
Trigger: GGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTT...AAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAAGGGCTTTACCATCCATaGCCCCTGCAGTTCACGCAG +
Preference number: 5 (lower is better)
Translates to: LLFFLLILFLCLLQSQFKGLYHP*PLQFTQ
Trigger: CTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCC...TTTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS-3UTR CAA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAATCCGCTTGAACTTGTaGGAGGCCATCTCCCCCACC +
Preference number: 5 (lower is better)
Translates to: PWEPPITKSLIVSLNGWEIRLNL*EAISPT
Trigger: GGTGGGGGAGATGGCCTCCAACAAGTTCAAGCGGAT...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp GGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCAAGTCCCCACTTGTaGGTGTCTTCTAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GKSACQEPKGFTIHCPCSSSPHL*VSSSSL
Trigger: CAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGA...ACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCACATCAAGTCCCCACTaGTTGGTGTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: LPGKSACQEPKGFTIHCPTSSPH*LVSSSS
Trigger: GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGT...GGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACACATCAAGTCCCCACTaGTTGGTGTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PHGASSWKVCLPRAKGLYTSSPH*LVSSSS
Trigger: GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGT...GTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTCTTAGCTCCGCCACCTaGAACACATCAAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: SLFLESLPAKSQRALPSILSSAT*NTSSPH
Trigger: GTGGGGACTTGATGTGTTCAAGGTGGCGGAGCTAAG...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTAGGAGGTTCATGTGTTaGGACATGTCTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVRRFMC*DMSVAS
Trigger: GCTGGCCACAGACATGTCCAAACACATGAACCTCCT...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TTAAGTGACAGATGTGACTCAAGAGTGACCACTGGAGAGGGTGGACTAGAGGCTGGACTTCGGGGGATCTaGCTCTGGTACCACTCTCGA +
Preference number: 5 (lower is better)
Translates to: LSDRCDSRVTTGEGGLEAGLRGI*LWYHSR
Trigger: TCGAGAGTGGTACCAGAGCAAGATCCCCCGAAGTCC...AGCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAGTCACATCTGTCACTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp AGCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTAACTCCAAGGCCTCTTaGGCTAAAGCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SHMEPLPGKSACQEPKGFNSKAS*AKAVSS
Trigger: GGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTT...AAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCAACTCCAAGGCCTCTTaGGCTAAAGCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: WSLFLESLPAKSQRALPSNSKAS*AKAVSS
Trigger: GGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTT...GGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATTCCCGGCCAAGACTTTaGGGTCAAAGGTCACCGTAT +
Preference number: 5 (lower is better)
Translates to: HGASSWKVCLPRAKGLYHSRPRL*GQRSPY
Trigger: ATACGGTGACCTTTGACCCAAAAGTCTTGGCCGGGA...ATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR CAA 90 bp TTAAGTGACAGATGTGACTCAAGAGTGACCACTGGAGAGGGTGGACTAGAGGCTCTGACTCCCCACCCTTaGTGCAGGGCTACTACAGAG +
Preference number: 5 (lower is better)
Translates to: LSDRCDSRVTTGEGGLEALTPHP*CRATTE
Trigger: CTCTGTAGTAGCCCTGCACAAAGGGTGGGGAGTCAG...AGCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAGTCACATCTGTCACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS TCA 90 bp GAACCAAGACAAGGACTTGGAGTGGAGAAGACAGAAATTGTCCACTaGTCGCTGCTAAATGGAGGGCAGGGAGACAGGGTCTCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: EPRQGLGVEKTEIVH*SLLNGGQGDRVSGD
Trigger: GTCTCCTGAGACCCTGTCTCCCTGCCCTCCATTTAGCAGCGATCAGTGGACAATTTCTGTCTTCTCCACTCCAAGTCCTTGTCTTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594465.7
CDS-3UTR CAA 90 bp GCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGTCAAGTCCCCACTTGTaGGTGTCTTCTAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASSWKVCLPRAKGLYHPLSSPHL*VSSSSL
Trigger: CAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGA...CAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTACATCAAGTCCCCACTaGTTGGTGTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVTSSPH*LVSSSS
Trigger: GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGT...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CCTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAACATCAAGTCCCCACTaGTTGGTGTCTTCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PPLLPPHPLPLPPPESVQTSSPH*LVSSSS
Trigger: GGAGCTAGAAGACACCAACAAGTGGGGACTTGATGT...TTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCAGCGCCAGCTCTGAGTaGGTGTTAATCAGAAACTGG +
Preference number: 5 (lower is better)
Translates to: LFLESLPAKSQRALPSIASASSE*VLIRNW
Trigger: CCAGTTTCTGATTAACACCAACTCAGAGCTGGCGCT...GGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CTCCTCTTCTTCCTCCTCATCCTCTTCCTCTGCCTCCTCCAGAGTCAGTTCAAAAGGAGGTTCATGTGTTaGGACATGTCTGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LLFFLLILFLCLLQSQFKRRFMC*DMSVAS
Trigger: GCTGGCCACAGACATGTCCAAACACATGAACCTCCT...TTTGAACTGACTCTGGAGGAGGCAGAGGAAGAGGATGAGGAGGAAGAAGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598111.7
ENST00000599188.5
CDS-3UTR CAA 90 bp TGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCACGCAGGGCTGGTATGAGTGAAGCTTaGGTGCTGAAAATTTTCCCC +
Preference number: 5 (lower is better)
Translates to: CQEPKGFTIHCPCSSRRAGMSEA*VLKIFP
Trigger: GGGGAAAATTTTCAGCACCAAAGCTTCACTCATACC...AGCCCTGCGTGAACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CAA 90 bp TTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTCCCCTCTTTTTATTGTaGTTGTCGTTGCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FLESLPAKSQRALPSIAPPLFLL*LSLPRL
Trigger: CAGCCTGGGCAACGACAACAACAATAAAAAGAGGGG...AGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CAA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTTCAAGTCCCCACTTGTaGGTGTCTTCTAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SLFLESLPAKSQRALPSISSPHL*VSSSSL
Trigger: CAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGA...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp AGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTAACTCCAAGGCCTCTTaGGCTAAAGCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SLFLESLPAKSQRALPSINSKAS*AKAVSS
Trigger: GGAAGAGACAGCTTTAGCCAAAGAGGCCTTGGAGTT...AATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000539010.5
ENST00000594465.7
ENST00000594617.7
ENST00000599188.5
CDS-3UTR CAA 90 bp CATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCTCTTTTTATTGTTGTaGTCGTTGCCCAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: HGASSWKVCLPRAKGLYHLFLLL*SLPRLE
Trigger: CTCCAGCCTGGGCAACGACAACAACAATAAAAAGAG...ATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS-3UTR CAA 90 bp CCCTGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAATCAAGTCCCCACTTGTaGGTGTCTTCTAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PWEPPITKSLIVSLNGWESSPHL*VSSSSL
Trigger: CAAGGAGCTAGAAGACACCAACAAGTGGGGACTTGA...TTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp GGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCACCTATAACTAAGAGCTaGATTGTCTCCCTAAATGGG +
Preference number: 5 (lower is better)
Translates to: GASSWKVCLPRAKGLYHPPITKS*IVSLNG
Trigger: CCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGG...TGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp GCCACATGGAGCCTCTTCCTGGAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCTATAACTAAGAGCTaGATTGTCTCCCTAAATGGG +
Preference number: 5 (lower is better)
Translates to: ATWSLFLESLPAKSQRALPITKS*IVSLNG
Trigger: CCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGG...TAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTCCAGGAAGAGGCTCCATGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp TGGGAGCCACCTATAACTAAGAGCTTGATTGTCTCCCTAAATGGGTGGGAAAGTGTAGAGGTGGGGGATTaGGCAGCATTCGGTCCAAGT +
Preference number: 5 (lower is better)
Translates to: WEPPITKSLIVSLNGWESVEVGD*AAFGPS
Trigger: ACTTGGACCGAATGCTGCCAAATCCCCCACCTCTAC...ACTTTCCCACCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGGTGGCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS-3UTR CAA 90 bp GAAAGTCTGCCTGCCAAGAGCCAAAGGGCTTTACCATCCATTGCCCCTGCAGTTCCTATAACTAAGAGCTaGATTGTCTCCCTAAATGGG +
Preference number: 5 (lower is better)
Translates to: ESLPAKSQRALPSIAPAVPITKS*IVSLNG
Trigger: CCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGG...AACTGCAGGGGCAATGGATGGTAAAGCCCTTTGGCTCTTGGCAGGCAGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp TTAAGTGACAGATGTGACTCAAGAGTGACCACTGGAGAGGGTGGACTAGAGGCTCCTATAACTAAGAGCTaGATTGTCTCCCTAAATGGG +
Preference number: 5 (lower is better)
Translates to: LSDRCDSRVTTGEGGLEAPITKS*IVSLNG
Trigger: CCCATTTAGGGAGACAATCAAGCTCTTAGTTATAGG...AGCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAGTCACATCTGTCACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
CDS-3UTR CAA 90 bp TTAAGTGACAGATGTGACTCAAGAGTGACCACTGGAGAGGGTGGACTAGAGGCTCCATGCCCAGCTAATTaGTGTATTTTTAGTAGAGAT +
Preference number: 5 (lower is better)
Translates to: LSDRCDSRVTTGEGGLEAPCPAN*CIFSRD
Trigger: ATCTCTACTAAAAATACACAAATTAGCTGGGCATGG...AGCCTCTAGTCCACCCTCTCCAGTGGTCACTCTTGAGTCACATCTGTCACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS GCA 72 bp AGGACTCGTCCCCGTGAGCGGGCGCCGAGGAGCGTCTaGTCCCGGGTCCGGCCCAGGGCCGGGAGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: RTRPRERAPRSV*SRVRPRAGSGG
Trigger: GCCTCCACTCCCGGCCCTGGGCCGGACCCGGGAGCAGACGCTCCTCGGCGCCCGCTCACGGGGACGAGTCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS CCA 72 bp CGCAAGCAGCTGCCGGGCGCAGGCGCGCGCTCAGCCTaGGACTCCCGAACGCCCTGCCTCGAAAACCCCCTC +
Preference number: 6 (lower is better)
Translates to: RKQLPGAGARSA*DSRTPCLENPL
Trigger: GAGGGGGTTTTCGAGGCAGGGCGTTCGGGAGTCCCAGGCTGAGCGCGCGCCTGCGCCCGGCAGCTGCTTGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS GCA 72 bp GGTCCCTGCCTGCGGTACAGCAGCCTCAGGCGTGGCTaGTCCGCCCATCTCGCCCCGCCCCCAAGTCCACCA +
Preference number: 6 (lower is better)
Translates to: GPCLRYSSLRRG*SAHLAPPPSPP
Trigger: TGGTGGACTTGGGGGCGGGGCGAGATGGGCGGAGCAGCCACGCCTGAGGCTGCTGTACCGCAGGCAGGGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 72 bp GTGGACCGAGTGCTTAGAGGATGCAGCGCAAGCAGCTaGCGGGCGCAGGCGCGCGCTCAGCCTGGGACTCCC +
Preference number: 6 (lower is better)
Translates to: VDRVLRGCSASS*RAQARAQPGTP
Trigger: GGGAGTCCCAGGCTGAGCGCGCGCCTGCGCCCGGCAGCTGCTTGCGCTGCATCCTCTAAGCACTCGGTCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS CAA 90 bp CCACTGATCCGGGACATGGGCTGTGGGGCCTCCTCAGCGGTCACCTaGGGCAGCTCCACCTCGGTCTGCTGGTCTGCGGATGGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: PLIRDMGCGASSAVT*GSSTSVCWSADGPG
Trigger: CCCTGGCCCATCCGCAGACCAGCAGACCGAGGTGGAGCTGCCCAAGGTGACCGCTGAGGAGGCCCCACAGCCCATGTCCCGGATCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 72 bp GCGGCCGCGAGAGCGACTCAACCTGCTGCAAGCCTCTaGCCCTTCGCCGACCCCCAGGTTCTCCATGCGCCA +
Preference number: 6 (lower is better)
Translates to: AAARATQPAASL*PFADPQVLHAP
Trigger: TGGCGCATGGAGAACCTGGGGGTCGGCGAAGGGGCAGAGGCTTGCAGCAGGTTGAGTCGCTCTCGCGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS CCA 72 bp CCGACGGGTCCCTGCTTGGCTGCTCCTAGGCATTGCTaGCGGGCAAGGGCCGCCACGTTGCTCCGAACGGTC +
Preference number: 6 (lower is better)
Translates to: PTGPCLAAPRHC*RARAATLLRTV
Trigger: GACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000610023.1
CDS CAA 72 bp GCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGACTGGCCAGGACCTGG +
Preference number: 6 (lower is better)
Translates to: APRHCWRARAAT*LRTVRRLARTW
Trigger: CCAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599188.5
ENST00000610023.1
CDS CAA 90 bp TGCTTGGCTGCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGACTGGCCAGGACCTGGGCAAAGGGC +
Preference number: 6 (lower is better)
Translates to: CLAAPRHCWRARAAT*LRTVRRLARTWAKG
Trigger: GCCCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000610023.1
CDS CAA 90 bp GCTCCCGGCCGAGGGCCAGTGTCCGGCTGGTCCCGGCCAAGACTTTaGGGTCAAAGGTCACCGTATCCCCGTCCACGAGCTGGGTCGGCA +
Preference number: 6 (lower is better)
Translates to: APGRGPVSGWSRPRL*GQRSPYPRPRAGSA
Trigger: TGCCGACCCAGCTCGTGGACGGGGATACGGTGACCTTTGACCCAAAAGTCTTGGCCGGGACCAGCCGGACACTGGCCCTCGGCCGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS CAA 90 bp CCTTTGGCTGCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGACTGGCCAGGACCTGGGCAAAGGGC +
Preference number: 6 (lower is better)
Translates to: PLAAPRHCWRARAAT*LRTVRRLARTWAKG
Trigger: GCCCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599188.5
CDS GCA 72 bp TTCGAACCCAGAGGGGTGGACCGAGTGCTTAGAGGATaGAGCGCAAGCAGCTGCCGGGCGCAGGCGCGCGCT +
Preference number: 6 (lower is better)
Translates to: FEPRGVDRVLRG*SASSCRAQARA
Trigger: AGCGCGCGCCTGCGCCCGGCAGCTGCTTGCGCTGCATCCTCTAAGCACTCGGTCCACCCCTCTGGGTTCGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS GCA 72 bp AAGTGGGTGCCAATTCGGCGCGGACCAAGCGCAGGATaGCAGCCACAGTCGGCGCCCACAAGCCCCACTCCG +
Preference number: 6 (lower is better)
Translates to: KWVPIRRGPSAG*QPQSAPTSPTP
Trigger: CGGAGTGGGGCTTGTGGGCGCCGACTGTGGCTGGCATCCTGCGCTTGGTCCGCGCCGAATTGGCACCCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS GCA 72 bp TGGTCATGCTGTGGCGGCCGCGAGAGCGACTCAACCTaGTGCAAGCCTCTGCCCCTTCGCCGACCCCCAGGT +
Preference number: 6 (lower is better)
Translates to: WSCCGGRESDST*CKPLPLRRPPG
Trigger: ACCTGGGGGTCGGCGAAGGGGCAGAGGCTTGCAGCAGGTTGAGTCGCTCTCGCGGCCGCCACAGCATGACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS GCA 72 bp GCCCCGCCCTCTACCTACTTGGCTGCTCCTAGGCATTaGTGGCGGGCAAGGGCCGCCACGTTGCTCCGAACG +
Preference number: 6 (lower is better)
Translates to: APPSTYLAAPRH*WRARAATLLRT
Trigger: CGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAGTAGGTAGAGGGCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 72 bp AACCCACCTGGAGGCGCCGGAGCCCCAGCCTCAATTTaGAGCCCGCTTTCCGCCCACCTTGTCTCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: NPPGGAGAPASI*SPLSAHLVSAG
Trigger: GCCGGCAGAGACAAGGTGGGCGGAAAGCGGGCTGCAAATTGAGGCTGGGGCTCCGGCGCCTCCAGGTGGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 72 bp GGGCTCAAGGTGGGGCCGACACCGAGGAGCTGTCGATaGCCAGATGGTGCACCACTGCGGAGTCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: GLKVGPTPRSCR*PDGAPLRSPAW
Trigger: CCAGGCAGGACTCCGCAGTGGTGCACCATCTGGGCATCGACAGCTCCTCGGTGTCGGCCCCACCTTGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594617.7
CDS CCA 72 bp TGCCGCCACAGGTGCTTCGGGGCTCTGGTCATGCTGTaGCGGCCGCGAGAGCGACTCAACCTGCTGCAAGCC +
Preference number: 6 (lower is better)
Translates to: CRHRCFGALVML*RPRERLNLLQA
Trigger: GGCTTGCAGCAGGTTGAGTCGCTCTCGCGGCCGCCACAGCATGACCAGAGCCCCGAAGCACCTGTGGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS CAA 72 bp GCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGACTGGCCAGGACCTGT +
Preference number: 6 (lower is better)
Translates to: APRHCWRARAAT*LRTVRRLARTC
Trigger: ACAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597297.1
CDS CAA 90 bp TACTTGGCTGCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGACTGGCCAGGACCTGGGCAAAGGGC +
Preference number: 6 (lower is better)
Translates to: YLAAPRHCWRARAAT*LRTVRRLARTWAKG
Trigger: GCCCTTTGCCCAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 72 bp TTTCCGACGGGTCCCTGCTTGGCTGCTCCTAGGCATTaGTGGCGGGCAAGGGCCGCCACGTTGCTCCGAACG +
Preference number: 6 (lower is better)
Translates to: FPTGPCLAAPRH*WRARAATLLRT
Trigger: CGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAGCAGGGACCCGTCGGAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262805.16
ENST00000447275.7
ENST00000594465.7
ENST00000594617.7
ENST00000610023.1
CDS GCA 72 bp TCATGCTGTGGCGGCCGCGAGAGCGACTCAACCTGCTaGAAGCCTCTGCCCCTTCGCCGACCCCCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: SCCGGRESDSTC*KPLPLRRPPGS
Trigger: AGAACCTGGGGGTCGGCGAAGGGGCAGAGGCTTGCAGCAGGTTGAGTCGCTCTCGCGGCCGCCACAGCATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594465.7
ENST00000594617.7
ENST00000597360.5
ENST00000599754.1
CDS GCA 72 bp GATTGCTGGATGAAGGGTTTCCGACGGGTCCCTGCCTaGGGTACAGCAGCCTCAGGCGTGGCTGCTCCGCCC +
Preference number: 6 (lower is better)
Translates to: DCWMKGFRRVPA*GTAASGVAAPP
Trigger: GGGCGGAGCAGCCACGCCTGAGGCTGCTGTACCGCAGGCAGGGACCCGTCGGAAACCCTTCATCCAGCAATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CCA 72 bp AGACTCGGAGCTCCCGGCCGAGGGCCAGTGTCCGGCTaGTCCCGGCCAAGACTTTTGGGTCAAAGGTCACCG +
Preference number: 6 (lower is better)
Translates to: RLGAPGRGPVSG*SRPRLLGQRSP
Trigger: CGGTGACCTTTGACCCAAAAGTCTTGGCCGGGACCAGCCGGACACTGGCCCTCGGCCGGGAGCTCCGAGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS CCA 72 bp CCGCCCTCTACCTACTTGGCTGCTCCTAGGCATTGCTaGCGGGCAAGGGCCGCCACGTTGCTCCGAACGGTC +
Preference number: 6 (lower is better)
Translates to: PPSTYLAAPRHC*RARAATLLRTV
Trigger: GACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAAGTAGGTAGAGGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CAA 72 bp AAACCCACCTGGAGGCGCCGGAGCCCCAGCCTCAATTaGCAGCCCGCTTTCCGCCCACCTTGTCTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: KPTWRRRSPSLN*QPAFRPPCLCR
Trigger: CCGGCAGAGACAAGGTGGGCGGAAAGCGGGCTGCAAATTGAGGCTGGGGCTCCGGCGCCTCCAGGTGGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CAA 90 bp GAATTGGCTGCTCCTAGGCATTGCTGGCGGGCAAGGGCCGCCACGTaGCTCCGAACGGTCCGCAGACTGGCCAGGACCTGTTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: ELAAPRHCWRARAAT*LRTVRRLARTCWEE
Trigger: CTCCTCCCAACAGGTCCTGGCCAGTCTGCGGACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAATTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597297.1
CDS TCA 72 bp TCCACCTCGGTCTGCTGGTCTGCGGATGGGCCAGGGTaGAGCTCAGAGAAGCCGATTTCACCTGCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: STSVCWSADGPG*SSEKPISPAGA
Trigger: GGCCCCAGCAGGTGAAATCGGCTTCTCTGAGCTTCACCCTGGCCCATCCGCAGACCAGCAGACCGAGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 72 bp AAAGGCAGGGATTCGAACCCAGAGGGGTGGACCGAGTaGTTAGAGGATGCAGCGCAAGCAGCTGCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: KGRDSNPEGWTE*LEDAAQAAAGR
Trigger: GCGCCCGGCAGCTGCTTGCGCTGCATCCTCTAAGCACTCGGTCCACCCCTCTGGGTTCGAATCCCTGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS GCA 72 bp GGTCACCTTGGGCAGCTCCACCTCGGTCTGCTGGTCTaGGGATGGGCCAGGGTGAAGCTCAGAGAAGCCGAT +
Preference number: 6 (lower is better)
Translates to: GHLGQLHLGLLV*GWARVKLREAD
Trigger: ATCGGCTTCTCTGAGCTTCACCCTGGCCCATCCGCAGACCAGCAGACCGAGGTGGAGCTGCCCAAGGTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CCA 72 bp GAGGGCCAGTGTCCGGCTGGTCCCGGCCAAGACTTTTaGGTCAAAGGTCACCGTATCCCCGTCCACGAGCTG +
Preference number: 6 (lower is better)
Translates to: EGQCPAGPGQDF*VKGHRIPVHEL
Trigger: CAGCTCGTGGACGGGGATACGGTGACCTTTGACCCAAAAGTCTTGGCCGGGACCAGCCGGACACTGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS CCA 72 bp GCTACCAGGAAGGTCCGGGAGATGTACTCGGACACCTaGTTCCCGGAGCGGCTGGTTTCGGACAGGTGGGTC +
Preference number: 6 (lower is better)
Translates to: ATRKVREMYSDT*FPERLVSDRWV
Trigger: GACCCACCTGTCCGAAACCAGCCGCTCCGGGAACCAGGTGTCCGAGTACATCTCCCGGACCTTCCTGGTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CCA 72 bp CAGGATCCGCTTGAATTGGCTGCTCCTAGGCATTGCTaGCGGGCAAGGGCCGCCACGTTGCTCCGAACGGTC +
Preference number: 6 (lower is better)
Translates to: QDPLELAAPRHC*RARAATLLRTV
Trigger: GACCGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAATTCAAGCGGATCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597297.1
CDS CAA 72 bp CGAGGGCCAGTGTCCGGCTGGTCCCGGCCAAGACTTTaGGGTCAAAGGTCACCGTATCCCCGTCCACGAGCT +
Preference number: 6 (lower is better)
Translates to: RGPVSGWSRPRL*GQRSPYPRPRA
Trigger: AGCTCGTGGACGGGGATACGGTGACCTTTGACCCAAAAGTCTTGGCCGGGACCAGCCGGACACTGGCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447275.7
CDS GCA 72 bp GTTCAGGATCCGCTTGAATTGGCTGCTCCTAGGCATTaGTGGCGGGCAAGGGCCGCCACGTTGCTCCGAACG +
Preference number: 6 (lower is better)
Translates to: VQDPLELAAPRH*WRARAATLLRT
Trigger: CGTTCGGAGCAACGTGGCGGCCCTTGCCCGCCAGCAATGCCTAGGAGCAGCCAATTCAAGCGGATCCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597297.1
CDS CCA 72 bp CTTGGGCAGCTCCACCTCGGTCTGCTGGTCTGCGGATaGGCCAGGGTGAAGCTCAGAGAAGCCGATTTCACC +
Preference number: 6 (lower is better)
Translates to: LGQLHLGLLVCG*ARVKLREADFT
Trigger: GGTGAAATCGGCTTCTCTGAGCTTCACCCTGGCCCATCCGCAGACCAGCAGACCGAGGTGGAGCTGCCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS TCA 72 bp CATTTTCCAGGTCAAAGCACAGCGGATGGGCCACCGTaGAGCGCCGCTGCAGGCGGATGCTCTGATTCACCA +
Preference number: 6 (lower is better)
Translates to: HFPGQSTADGPP*SAAAGGCSDSP
Trigger: TGGTGAATCAGAGCATCCGCCTGCAGCGGCGCTTCACGGTGGCCCATCCGCTGTGCTTTGACCTGGAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262805.16
ENST00000599188.5
CDS TCA 72 bp AGGTACTTTACCTGCAGGAGGGAGCTGATTGCTGGATaGAGGGTTTCCGACGGGTCCCTGCTTGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RYFTCRRELIAG*RVSDGSLLGCS
Trigger: GGAGCAGCCAAGCAGGGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGGTAAAGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597573.1
CDS TCA 72 bp AGGTACTTTACCTGCAGGAGGGAGCTGATTGCTGGATaGAGGGTTTCCGACGGGTCCCTGCCTGCGGTACAG +
Preference number: 6 (lower is better)
Translates to: RYFTCRRELIAG*RVSDGSLPAVQ
Trigger: CTGTACCGCAGGCAGGGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGGTAAAGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CCA 72 bp CGTTTCTGGAAAGGCAGGGATTCGAACCCAGAGGGGTaGACCGAGTGCTTAGAGGATGCAGCGCAAGCAGCT +
Preference number: 6 (lower is better)
Translates to: RFWKGRDSNPEG*TECLEDAAQAA
Trigger: AGCTGCTTGCGCTGCATCCTCTAAGCACTCGGTCCACCCCTCTGGGTTCGAATCCCTGCCTTTCCAGAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610023.1
CDS CCA 72 bp GAACAGGTACTTTACCTGCAGGAGGGAGCTGATTGCTaGATGAAGGGTTTCCGACGGGTCCCTGCCTGCGGT +
Preference number: 6 (lower is better)
Translates to: EQVLYLQEGADC*MKGFRRVPACG
Trigger: ACCGCAGGCAGGGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGGTAAAGTACCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS GCA 72 bp AAGGAACAGGTACTTTACCTGCAGGAGGGAGCTGATTaGTGGATGAAGGGTTTCCGACGGGTCCCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: KEQVLYLQEGAD*WMKGFRRVPAC
Trigger: GCAGGCAGGGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGGTAAAGTACCTGTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597360.5
CDS CCA 72 bp GAACAGGTACTTTACCTGCAGGAGGGAGCTGATTGCTaGATGAAGGGTTTCCGACGGGTCCCTGCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: EQVLYLQEGADC*MKGFRRVPAWL
Trigger: CAGCCAAGCAGGGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGGTAAAGTACCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597573.1
CDS GCA 72 bp AAGGAACAGGTACTTTACCTGCAGGAGGGAGCTGATTaGTGGATGAAGGGTTTCCGACGGGTCCCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: KEQVLYLQEGAD*WMKGFRRVPAW
Trigger: CCAAGCAGGGACCCGTCGGAAACCCTTCATCCAGCAATCAGCTCCCTCCTGCAGGTAAAGTACCTGTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597573.1