RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE4B (Homo sapiens)

Ensembl gene IDs: ENSG00000184588

Ensembl transcript IDs: ENST00000329654.8, ENST00000341517.9, ENST00000371045.9, ENST00000371048.7, ENST00000412480.6, ENST00000423207.6, ENST00000480109.2, ENST00000483863.2, ENST00000490695.1, ENST00000491340.2, ENST00000524999.1, ENST00000526197.5, ENST00000526666.1, ENST00000528771.5, ENST00000531025.5, ENST00000531358.1, ENST00000532040.1, ENST00000534463.5

Found 614 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGTGGCCCTTGTCCTGTGCAGGTCTTGGCCCCCATGGTGGGCTaGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTC +
Preference number: 1 (lower is better)
Translates to: PGGPCPVQVLAPMVG*PYHIAGMLIKDRMF
Trigger: GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACCTGCACAGGACAAGGGCCACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR GCA 90 bp TCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTaGCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCTGCTATTT +
Preference number: 1 (lower is better)
Translates to: SESAPSNSFSPLHQA*HQGKSTVGFPELLF
Trigger: AAATAGCAGCTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR TCA 90 bp GCAAGAGAAGGACGGCAGCATTACATTGAAAACAGCCTAACGGGGTaGAGAGAGGAGGTAGGGAACAGGGCCAGGGACTGTACAACTCCT +
Preference number: 1 (lower is better)
Translates to: AREGRQHYIENSLTG*REEVGNRARDCTTP
Trigger: AGGAGTTGTACAGTCCCTGGCCCTGTTCCCTACCTCCTCTCTTCACCCCGTTAGGCTGTTTTCAATGTAATGCTGCCGTCCTTCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR TCA 90 bp CTATTTGCTTCCTGGTCTTGCTTTCTGACTCCAAACTCAAGTAACTaGAAGGCCAGGTGGCCCTTGTCCTGTGCAGGTCTTGGCCCCCAT +
Preference number: 1 (lower is better)
Translates to: LFASWSCFLTPNSSN*KARWPLSCAGLGPH
Trigger: ATGGGGGCCAAGACCTGCACAGGACAAGGGCCACCTGGCCTTTCAGTTACTTGAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR TCA 90 bp TCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTaGGCTGCTATTTGCTTCCTGGTCTTGCTTTCTGACTCCAAACTC +
Preference number: 1 (lower is better)
Translates to: SPPSLPSRQVNRGIS*AAICFLVLLSDSKL
Trigger: GAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAATAGCAGCTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR GCA 90 bp CACACTGCTGAGTTCTATGCAGACTCTCACGGTGAACGACACCACTaGTCCTTTCTACCCCCTAATTTGTTCAATTTTATTCTGTTTACA +
Preference number: 1 (lower is better)
Translates to: HTAEFYADSHGERHH*SFLPPNLFNFILFT
Trigger: TGTAAACAGAATAAAATTGAACAAATTAGGGGGTAGAAAGGAGCAGTGGTGTCGTTCACCGTGAGAGTCTGCATAGAACTCAGCAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR CAA 90 bp ACTCAAGTAACTGAAAGGCCAGGTGGCCCTTGTCCTGTGCAGGTCTaGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTC +
Preference number: 2 (lower is better)
Translates to: TQVTERPGGPCPVQV*APMVGWPYHIAGML
Trigger: GAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACCTGCACAGGACAAGGGCCACCTGGCCTTTCAGTTACTTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGCCCCCATGGTGGGCTaGCCCTACCACATAGCTGGC +
Preference number: 2 (lower is better)
Translates to: RQEATSSKSVVREHSEESAPMVG*PYHIAG
Trigger: GCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR TCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCCAAACTCAAGTAACTaGAAGGCCAGGTGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: CLDQNRPPATASALSTKLPNSSN*KARWPL
Trigger: CAAGGGCCACCTGGCCTTTCAGTTACTTGAGTTTGG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR TCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCCAAACTCAAGTAACTaGAAGGCCAGGTGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEPNSSN*KARWPL
Trigger: CAAGGGCCACCTGGCCTTTCAGTTACTTGAGTTTGG...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGTGGCCCTTGTCCTGTaGAGGTCTTGGCCCCCATGG +
Preference number: 2 (lower is better)
Translates to: RQEATSSKSVVREHSEESVALVL*RSWPPW
Trigger: CCATGGGGGCCAAGACCTGCACAGGACAAGGGCCAC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCATTTGCTTCCTGGTCTTaGTTTCTGACTCCAAACTCA +
Preference number: 2 (lower is better)
Translates to: NRPPATASALSTKLAIKAFASWS*FLTPNS
Trigger: TGAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAA...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGTCCTGTGCAGGTCTTaGCCCCCATGGTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMVLCRS*PPWWAG
Trigger: GCCAGCCCACCATGGGGGCCAAGACCTGCACAGGAC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATCAAGCCATGTGTCTTaGTCAGAATCGGCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSSSHVS*SESAPS
Trigger: GCTGGGGGCCGATTCTGATCAAGACACATGGCTTGA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR TCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATGCAGACTCTCACGGTaGACGACACCACTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: RQEATSSKSVVREHSEESCRLSR*TTPLLL
Trigger: AAGGAGCAGTGGTGTCGTTCACCGTGAGAGTCTGCA...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCTGCTATTTGCTTCCTaGTCTTGCTTTCTGACTCCA +
Preference number: 2 (lower is better)
Translates to: SPLHQACHQGKSTVGFPELLFAS*SCFLTP
Trigger: TGGAGTCAGAAAGCAAGACCAGGAAGCAAATAGCAG...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR TCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAAAAGGGCAGACCCTTTaGACAAAAGCCCACCCCTGT +
Preference number: 2 (lower is better)
Translates to: RQEATSSKSVVREHSEESKGQTL*TKAHPC
Trigger: ACAGGGGTGGGCTTTTGTTCAAAGGGTCTGCCCTTT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGTCCTGTGCAGGTCTTaGCCCCCATGGTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTVLCRS*PPWWAG
Trigger: GCCAGCCCACCATGGGGGCCAAGACCTGCACAGGAC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGCACCCCTGTCCTCTCTaGCAAGGGGGCCATATGTCT +
Preference number: 2 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMHPCPL*QGGHMS
Trigger: AGACATATGGCCCCCTTGGCAGAGAGGACAGGGGTG...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGCCCCCATGGTGGGCTaGCCCTACCACATAGCTGGC +
Preference number: 2 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVAPMVG*PYHIAG
Trigger: GCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGC...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAAGGTCTTGGCCCCCATaGTGGGCTGGCCCTACCACA +
Preference number: 2 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTRSWPP*WAGPTT
Trigger: TGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACCT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGCCCCCATGGTGGGCTaGCCCTACCACATAGCTGGC +
Preference number: 2 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKAPMVG*PYHIAG
Trigger: GCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGAGGTCTTGGCCCCCATaGTGGGCTGGCCCTACCACA +
Preference number: 2 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVRSWPP*WAGPTT
Trigger: TGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACCT...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAAAGGCAAGTCAACCGTaGGATTTCCTGAGCTGCTAT +
Preference number: 2 (lower is better)
Translates to: RQEATSSKSVVREHSEESKASQP*DFLSCY
Trigger: ATAGCAGCTCAGGAAATCCCACGGTTGACTTGCCTT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGTGGCCCTTGTCCTGTaGAGGTCTTGGCCCCCATGG +
Preference number: 2 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKVALVL*RSWPPW
Trigger: CCATGGGGGCCAAGACCTGCACAGGACAAGGGCCAC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATTCATAAAGGGGTTGTaGAGAAGTAGCAACTCAGGC +
Preference number: 2 (lower is better)
Translates to: RQEATSSKSVVREHSEESFIKGL*RSSNSG
Trigger: GCCTGAGTTGCTACTTCTGCACAACCCCTTTATGAA...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR CAA 90 bp ATGATAGTAGGATCCAGTTATAACCCAACTCATGCCCACATAGATTaGGATAGAACCTGGGTAAAAACTACATCCCATTGCCCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: MIVGSSYNPTHAHID*DRTWVKTTSHCPLP
Trigger: GGGCAGGGGGCAATGGGATGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATAACTGGATCCTACTATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAAACAGCCTAACGGGGTaGAGAGAGGAGGTAGGGAAC +
Preference number: 2 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTNSLTG*REEVGN
Trigger: GTTCCCTACCTCCTCTCTTCACCCCGTTAGGCTGTT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR TCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGACGGCAGCATTACATTaGAAACAGCCTAACGGGGTG +
Preference number: 2 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMTAALH*KQPNGV
Trigger: CACCCCGTTAGGCTGTTTTCAATGTAATGCTGCCGT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGGTGAACGACACCACTaGTCCTTTCTACCCCCTAAT +
Preference number: 2 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMGERHH*SFLPPN
Trigger: ATTAGGGGGTAGAAAGGAGCAGTGGTGTCGTTCACC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAACTGTACAACTCCTGTaGGGGGCAGGGTCCAAGACA +
Preference number: 2 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTTVQLL*GAGSKT
Trigger: TGTCTTGGACCCTGCCCCCCACAGGAGTTGTACAGT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAAAACTTAGTGCAGAATaGTCTCTCAGTTTTGTGTCT +
Preference number: 2 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSKLSAE*SLSFVS
Trigger: AGACACAAAACTGAGAGATCATTCTGCACTAAGTTT...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGGTGAACGACACCACTaGTCCTTTCTACCCCCTAAT +
Preference number: 2 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTGERHH*SFLPPN
Trigger: ATTAGGGGGTAGAAAGGAGCAGTGGTGTCGTTCACC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCCTCTCCACCAAGCTTaGCATCAAGGCAAGTCAACC +
Preference number: 2 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKPLHQA*HQGKST
Trigger: GGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAAAGGCAAGTCAACCGTaGGATTTCCTGAGCTGCTAT +
Preference number: 2 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTKASQP*DFLSCY
Trigger: ATAGCAGCTCAGGAAATCCCACGGTTGACTTGCCTT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACATTTGCTTCCTGGTCTTaGTTTCTGACTCCAAACTCA +
Preference number: 2 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTFASWS*FLTPNS
Trigger: TGAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAA...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGATTTGGATAGAACCTaGGTAAAAACTACATCCCAT +
Preference number: 2 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMDLDRT*VKTTSH
Trigger: ATGGGATGTAGTTTTTACCCAGGTTCTATCCAAATC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR GCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGTTTGCTTCCTGGTCTTaGTTTCTGACTCCAAACTCA +
Preference number: 2 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVFASWS*FLTPNS
Trigger: TGAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAA...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCTGCTATTTGCTTCCTaGTCTTGCTTTCTGACTCCA +
Preference number: 2 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKLLFAS*SCFLTP
Trigger: TGGAGTCAGAAAGCAAGACCAGGAAGCAAATAGCAG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGTAACTGTAGTAAAGTaGAGGATATTGCCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTVTVVK*RILPKK
Trigger: TTTCTTGGGCAATATCCTTCACTTTACTACAGTTAC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACATATTGTTTCCAAAACTaGTTCATAAAGGGGTTGTGC +
Preference number: 2 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTYCFQN*FIKGLC
Trigger: GCACAACCCCTTTATGAACCAGTTTTGGAAACAATA...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR GCA 72 bp GCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTaGCATCAAGGCAAGTCAACCGTGGGATTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: APSNSFSPLHQA*HQGKSTVGFPE
Trigger: CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGATTTGCTTCCTGGTCTaGCTTTCTGACTCCAAACTC +
Preference number: 3 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEICFLV*LSDSKL
Trigger: GAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAAT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGAAAGGGCAGACCCTTaGAACAAAAGCCCACCCCTG +
Preference number: 3 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSERADP*NKSPPL
Trigger: CAGGGGTGGGCTTTTGTTCAAAGGGTCTGCCCTTTC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR TCA 72 bp TCCTGGTCTTGCTTTCTGACTCCAAACTCAAGTAACTaGAAGGCCAGGTGGCCCTTGTCCTGTGCAGGTCTT +
Preference number: 3 (lower is better)
Translates to: SWSCFLTPNSSN*KARWPLSCAGL
Trigger: AAGACCTGCACAGGACAAGGGCCACCTGGCCTTTCAGTTACTTGAGTTTGGAGTCAGAAAGCAAGACCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR CCA 72 bp CTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTaGGATTTCCTGAGCTGCTATTTGCTTCCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: LSTKLAIKASQP*DFLSCYLLPGL
Trigger: AAGACCAGGAAGCAAATAGCAGCTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR TCA 72 bp AGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTaGGCTGCTATTTGCTTCCTGGTCTTGCTTTCTGAC +
Preference number: 3 (lower is better)
Translates to: SLPSRQVNRGIS*AAICFLVLLSD
Trigger: GTCAGAAAGCAAGACCAGGAAGCAAATAGCAGCTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAAAGGCCAGGTGGCCCTaGTCCTGTGCAGGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTKARWP*SCAGLG
Trigger: GCCAAGACCTGCACAGGACAAGGGCCACCTGGCCTT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGAAAGGGCAGACCCTTaGAACAAAAGCCCACCCCTG +
Preference number: 3 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMERADP*NKSPPL
Trigger: CAGGGGTGGGCTTTTGTTCAAAGGGTCTGCCCTTTC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGAAGGCCAGGTGGCCCTaGTCCTGTGCAGGTCTTGGC +
Preference number: 3 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKKARWP*SCAGLG
Trigger: GCCAAGACCTGCACAGGACAAGGGCCACCTGGCCTT...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAATTTGCTTCCTGGTCTaGCTTTCTGACTCCAAACTC +
Preference number: 3 (lower is better)
Translates to: RQEATSSKSVVREHSEESICFLV*LSDSKL
Trigger: GAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAAT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATGGTTCATAAAGGGGTaGTGCAGAAGTAGCAACTCA +
Preference number: 3 (lower is better)
Translates to: RQEATSSKSVVREHSEESWFIKG*CRSSNS
Trigger: TGAGTTGCTACTTCTGCACAACCCCTTTATGAACCA...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAAAGTTAAAAGTACTGTaGGAGGCAGGCAAACAGAGA +
Preference number: 3 (lower is better)
Translates to: RQEATSSKSVVREHSEESKLKVL*EAGKQR
Trigger: TCTCTGTTTGCCTGCCTCCAACAGTACTTTTAACTT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACATGCCCACATAGATTaGGATAGAACCTGGGTAAAA +
Preference number: 3 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSHAHID*DRTWVK
Trigger: TTTTACCCAGGTTCTATCCAAATCTATGTGGGCATG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCCCTCTCCACCAAGCTaGCCATCAAGGCAAGTCAAC +
Preference number: 3 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKPSPPS*PSRQVN
Trigger: GTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGTTCAAGCCATGTGTCTaGATCAGAATCGGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVFKPCV*IRIGPQ
Trigger: CTGGGGGCCGATTCTGATCAAGACACATGGCTTGAA...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR GCA 72 bp GAGTTCTATGCAGACTCTCACGGTGAACGACACCACTaGTCCTTTCTACCCCCTAATTTGTTCAATTTTATT +
Preference number: 3 (lower is better)
Translates to: EFYADSHGERHH*SFLPPNLFNFI
Trigger: AATAAAATTGAACAAATTAGGGGGTAGAAAGGAGCAGTGGTGTCGTTCACCGTGAGAGTCTGCATAGAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGAAGTTAAAAGTACTGTaGGAGGCAGGCAAACAGAGA +
Preference number: 3 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMKLKVL*EAGKQR
Trigger: TCTCTGTTTGCCTGCCTCCAACAGTACTTTTAACTT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGAATTTAACACCACCATaGGCAGGCAATGTTAGATAT +
Preference number: 3 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMNLTPP*AGNVRY
Trigger: ATATCTAACATTGCCTGCCAATGGTGGTGTTAAATT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAAATGATCTCTCAGTTTaGTGTCTTCCATTTTCAAGC +
Preference number: 3 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTNDLSV*CLPFSS
Trigger: GCTTGAAAATGGAAGACACAAAACTGAGAGATCATT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR-3UTR CAA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGAATGATCTCTCAGTTTaGTGTCTTCCATTTTCAAGC +
Preference number: 3 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKNDLSV*CLPFSS
Trigger: GCTTGAAAATGGAAGACACAAAACTGAGAGATCATT...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
3UTR TCA 72 bp CCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTaGAGGATATTGCCCAAGAAAGAAGGAAGACTATTT +
Preference number: 3 (lower is better)
Translates to: PFCLFAKVTVVK*RILPKKEGRLF
Trigger: AAATAGTCTTCCTTCTTTCTTGGGCAATATCCTTCACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGCCCCCATGGTGGGCTaGCCCTACCACATAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQAPMVG*PYHIAG
Trigger: GCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGACCATGCGCTGCGAGTaGGCCTTCCGCGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPETMRCE*AFRAPG
Trigger: CCCGGGAGCGCGGAAGGCTCACTCGCAGCGCATGGT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAAGGTCTTGGCCCCCATaGTGGGCTGGCCCTACCACA +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQRSWPP*WAGPTT
Trigger: TGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACCT...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGGGAGACACAGGCGCTaGCGACGCGCCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLGRHRR*RRAPQL
Trigger: GAGCTGAGGGGCGCGTCGCCAGCGCCTGTGTCTCCC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS-3UTR GCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAATTAGGCTGGAGCGGCTaGAGGCTGTCCATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQLGWSG*RLSIAE
Trigger: CTCTGCTATGGACAGCCTGCAGCCGCTCCAGCCTAA...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCCCCATGGTGGGCTaGCCCTACCACATAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLAPMVG*PYHIAG
Trigger: GCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGTCCTGTGCAGGTCTTaGCCCCCATGGTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLVLCRS*PPWWAG
Trigger: GCCAGCCCACCATGGGGGCCAAGACCTGCACAGGAC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGGTCCTGTGCAGGTCTTaGCCCCCATGGTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEVLCRS*PPWWAG
Trigger: GCCAGCCCACCATGGGGGCCAAGACCTGCACAGGAC...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCTGGAGACAGGAGGCTaGCTAGCAGCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPELETGG*LAAGDL
Trigger: GAGGTCCCCAGCTGCTAGTCAGCCTCCTGTCTCCAG...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGTGGCCCTTGTCCTGTaGAGGTCTTGGCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLVALVL*RSWPPW
Trigger: CCATGGGGGCCAAGACCTGCACAGGACAAGGGCCAC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTAGGTCTTGGCCCCCATaGTGGGCTGGCCCTACCACA +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLRSWPP*WAGPTT
Trigger: TGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACCT...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAACTGTACAACTCCTGTaGGGGGCAGGGTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQTVQLL*GAGSKT
Trigger: TGTCTTGGACCCTGCCCCCCACAGGAGTTGTACAGT...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGCCAGCGGGCTAGCCTaGGGAACCCGCGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESASGLA*GTRARE
Trigger: CTCCCTGGCGCGGGTTCCCCAGGCTAGCCCGCTGGC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS-3UTR CCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCACAGTGGTGCTCTGCCTaGGATGGCTGGTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAQWCSA*DGWCQV
Trigger: AACTTGGCACCAGCCATCCCAGGCAGAGCACCACTG...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR TCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGCGTCTTTGTGCTGCTaGAATAGCTGTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQASLCC*NSCVPL
Trigger: GAGAGGGACACAGCTATTTCAGCAGCACAAAGACGC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAAACAGCCTAACGGGGTaGAGAGAGGAGGTAGGGAAC +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKANSLTG*REEVGN
Trigger: GTTCCCTACCTCCTCTCTTCACCCCGTTAGGCTGTT...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTGGGGGACGAAAGTCTaGCCGGAGGGCGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGWGTKV*PEGARV
Trigger: CACGCGAGCGCCCTCCGGGCAGACTTTCGTCCCCCA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS-3UTR TCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCACTCGTCCAGTGGTGGTaGGGGACTTTGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKALVQWW*GTLRYH
Trigger: ATGATACCTCAAAGTCCCTCACCACCACTGGACGAG...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCACCAAACTCAAGTAACTaGAAGGCCAGGTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAPNSSN*KARWPL
Trigger: CAAGGGCCACCTGGCCTTTCAGTTACTTGAGTTTGG...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAGGCTGGCTTTGCCTCTaGAAATGCGCCAAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAGWLCL*KCAKVL
Trigger: AAGCACTTTGGCGCATTTTCAGAGGCAAAGCCAGCC...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR GCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCAGCCGGGAGCTCACTaGATCTCCCTTACCACCAGA +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLQPGAH*ISLTTR
Trigger: TCTGGTGGTAAGGGAGATGCAGTGAGCTCCCGGCTG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329654.8
CDS-3UTR GCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGACCTCACAGACCTCCTaGAATATTCCGCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPETSQTS*NIPRAR
Trigger: CCGTGCCCGCGGAATATTGCAGGAGGTCTGTGAGGT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329654.8
CDS-3UTR GCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTTGGCAGTCCCTGTTCTaGTCGTCCAGTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLWQSLF*SSSGGE
Trigger: CTCACCACCACTGGACGAGCAGAACAGGGACTGCCA...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGTGGCCCTTGTCCTGTaGAGGTCTTGGCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFVALVL*RSWPPW
Trigger: CCATGGGGGCCAAGACCTGCACAGGACAAGGGCCAC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGTGAACGACACCACTaGTCCTTTCTACCCCCTAAT +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQGERHH*SFLPPN
Trigger: ATTAGGGGGTAGAAAGGAGCAGTGGTGTCGTTCACC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCACCCCTGTCCTCTCTaGCAAGGGGGCCATATGTCT +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLHPCPL*QGGHMS
Trigger: AGACATATGGCCCCCTTGGCAGAGAGGACAGGGGTG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGATCACAGTGGTGCTCTaGCTGGGATGGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEITVVL*LGWLVP
Trigger: TGGCACCAGCCATCCCAGGCAGAGCACCACTGTGAT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCAGTGGACTCCGACCTaGGGAAGGGCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEQWTPT*GRAIFH
Trigger: GTGGAAAATGGCCCTTCCCCAGGTCGGAGTCCACTG...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGCGGAAGAGCTGGCCTaGGGATCCAGTGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFAEELA*GSSGLR
Trigger: TCGGAGTCCACTGGATCCCCAGGCCAGCTCTTCCGC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGCCCAGCGGAAGAGCTaGCCTGGGGATCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGAQRKS*PGDPVD
Trigger: GTCCACTGGATCCCCAGGCCAGCTCTTCCGCTGGGC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGCCCAGCGGAAGAGCTaGCCTGGGGATCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGAQRKS*PGDPVD
Trigger: GTCCACTGGATCCCCAGGCCAGCTCTTCCGCTGGGC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCATCACACTTCGCAAGCTaGCAAGGACCTGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKASHFAS*QGPGQK
Trigger: CTTTTGCCCAGGTCCTTGCCAGCTTGCGAAGTGTGA...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGCCCCCATGGTGGGCTaGCCCTACCACATAGCTGGC +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGAPMVG*PYHIAG
Trigger: GCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACTGGAGACAGGAGGCTaGCTAGCAGCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGLETGG*LAAGDL
Trigger: GAGGTCCCCAGCTGCTAGTCAGCCTCCTGTCTCCAG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATCTCCAAATCTGTaGAGACAGCGTCTAATGCTG +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQGSPNL*RQRLML
Trigger: CAGCATTAGACGCTGTCTTCACAGATTTGGAGATCC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTTCAAGCCATGTGTCTTaGTCAGAATCGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLSSHVS*SESAPS
Trigger: GCTGGGGGCCGATTCTGATCAAGACACATGGCTTGA...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTAACAGCCTAACGGGGTaGAGAGAGGAGGTAGGGAAC +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLNSLTG*REEVGN
Trigger: GTTCCCTACCTCCTCTCTTCACCCCGTTAGGCTGTT...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAACGGCAGCATTACATTaGAAACAGCCTAACGGGGTG +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKATAALH*KQPNGV
Trigger: CACCCCGTTAGGCTGTTTTCAATGTAATGCTGCCGT...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAAAGTCATCGCCGTGTTaGTCGCTTGGAAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAKSSPC*SLGREE
Trigger: CTCTTCTCTTCCAAGCGAGCAACACGGCGATGACTT...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR GCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAACACAGTGTACCATGTTaGGAAGGACCTGAATGCGAT +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQHSVPC*EGPECD
Trigger: ATCGCATTCAGGTCCTTCGCAACATGGTACACTGTG...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCACATCCCATTGCCCCCTaGCCCTATCAAGCTATACAA +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAHPIAP*PYQAIQ
Trigger: TTGTATAGCTTGATAGGGGCAGGGGGCAATGGGATG...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGGCGCGGGTAGACCATaGGCTGCGAGTGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESGAGRP*AASEPS
Trigger: GGAAGGCTCACTCGCAGCGCATGGTCTACCCGCGCC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGCGGAAGAGCTGGCCTaGGGATCCAGTGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGAEELA*GSSGLR
Trigger: TCGGAGTCCACTGGATCCCCAGGCCAGCTCTTCCGC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGCCCAGCGGAAGAGCTaGCCTGGGGATCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSAQRKS*PGDPVD
Trigger: GTCCACTGGATCCCCAGGCCAGCTCTTCCGCTGGGC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAAAGCTGGCAAGGACCTaGGCAAAAGGAGTTACAATC +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQKLART*AKGVTI
Trigger: GATTGTAACTCCTTTTGCCCAGGTCCTTGCCAGCTT...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGTCTTCCAGCTCCTTaGCCAGGTGATCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQGLPAP*PGDLHF
Trigger: AAAATGAAGATCACCTGGCCAAGGAGCTGGAAGACC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGTAGAAAGGAGAACATaGGTCGACTGGGCTACATCA +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQVERRT*VDWATS
Trigger: TGATGTAGCCCAGTCGACCCATGTTCTCCTTTCTAC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTTTCTCCATCAGACCCTaGCAGTCCCTGTTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLFSIRP*QSLFCS
Trigger: CGAGCAGAACAGGGACTGCCAGGGTCTGATGGAGAA...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGCCCCCATGGTGGGCTaGCCCTACCACATAGCTGGC +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSAPMVG*PYHIAG
Trigger: GCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAACTGTGGAGTTGGACTaGACAACAGGGGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKATVELD*TTGEGS
Trigger: ACTTCCTTCCCCTGTTGTCCAGTCCAACTCCACAGT...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACCAGGAAAGGTGGCGTaGAGTACCAGCCCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGPGKVA*STSPAE
Trigger: TTCCGCTGGGCTGGTACTTCACGCCACCTTTCCTGG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGCCAGGAAAGGTGGCGTaGAGTACCAGCCCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGPGKVA*STSPAE
Trigger: TTCCGCTGGGCTGGTACTTCACGCCACCTTTCCTGG...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAACTTCATTTTCAGTGTTaGCTCCAAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQLHFQC*LQSVRC
Trigger: GCATCTCACGCTTTGGAGTCAACACTGAAAATGAAG...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCTCGTCCAGTGGTGGTaGGGGACTTTGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLLVQWW*GTLRYH
Trigger: ATGATACCTCAAAGTCCCTCACCACCACTGGACGAG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAGAAGTTATTAGTCAGTaGGTTCAGTCACTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAEVISQ*VQSLSG
Trigger: CCCCGACAGTGACTGAACTCACTGACTAATAACTTC...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCCTCTCCACCAAGCTTaGCATCAAGGCAAGTCAACC +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEPLHQA*HQGKST
Trigger: GGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGG...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCCACCCCTGTCCTCTCTaGCAAGGGGGCCATATGTCT +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFHPCPL*QGGHMS
Trigger: AGACATATGGCCCCCTTGGCAGAGAGGACAGGGGTG...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAATTCATAAAGGGGTTGTaGAGAAGTAGCAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQFIKGL*RSSNSG
Trigger: GCCTGAGTTGCTACTTCTGCACAACCCCTTTATGAA...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGAACAAATCACAGTGGTaGTCTGCCTGGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPENKSQW*SAWDGW
Trigger: CCAGCCATCCCAGGCAGAGCACCACTGTGATTTGTT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTTCACACTTCGCAAGCTaGCAAGGACCTGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLSHFAS*QGPGQK
Trigger: CTTTTGCCCAGGTCCTTGCCAGCTTGCGAAGTGTGA...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAATTTCTGGGTAGGAGATaGGATCTCCACATCATTCTG +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQFLGRR*DLHIIL
Trigger: CAGAATGATGTGGAGATCCCATCTCCTACCCAGAAA...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAAGGTCTTGGCCCCCATaGTGGGCTGGCCCTACCACA +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESRSWPP*WAGPTT
Trigger: TGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACCT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGTGCTCTGCCTGGGATaGCTGGTGCCAAGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGVLCLG*LVPSFP
Trigger: GGGGAAACTTGGCACCAGCCATCCCAGGCAGAGCAC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGGAGAACAAATCACAGTaGTGCTCTGCCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEENKSQ*CSAWDG
Trigger: GCCATCCCAGGCAGAGCACCACTGTGATTTGTTCTC...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR CCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCATCAGTAGCCTCCTTGTaGATGAGGTTTGTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKASVASL*MRFVCK
Trigger: CTTGCAGACAAACCTCATCCACAAGGAGGCTACTGA...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR TCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGTTAGGGGTCTATTGTaGGAATATCCAGCCACATTA +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQVRGLL*EYPATL
Trigger: TAATGTGGCTGGATATTCTCACAATAGACCCCTAAC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGATCTTCCTGAGTGTCTaGCGCTGCTTCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEIFLSV*RCFLVR
Trigger: TCTCACCAAGAAGCAGCGTCAGACACTCAGGAAGAT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGGAAAAATTCCTCCATaGTGCGGTCTGTCCATTGCC +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLGKIPP*CGLSIA
Trigger: GGCAATGGACAGACCGCATCATGGAGGAATTTTTCC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTGCAGACTCTCACGGTaGACGACACCACTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFCRLSR*TTPLLL
Trigger: AAGGAGCAGTGGTGTCGTTCACCGTGAGAGTCTGCA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCATGGGTCATGAGCTGCTaGTTTTTCTTTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAWVMSC*FFFFSL
Trigger: CAGGGAGAAAAAGAAAAAGCAGCAGCTCATGACCCA...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAACTCCAAAGCGTGAGATaGTTGTATTGTTTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQLQSVR*LYCLGL
Trigger: CAAGCCTAAACAATACAAGCATCTCACGCTTTGGAG...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCATGCGAAGGACCTGAATaGGATCGGTATAGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKACEGPE*DRYSCL
Trigger: TAGACAACTATACCGATCGCATTCAGGTCCTTCGCA...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGACTTTGAGGTATCATaGTCTGATACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQDFEVS*SDTSSC
Trigger: ACAGGAACTGGTATCAGAGCATGATACCTCAAAGTC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTGGCAGTCCCTGTTCTaGTCGTCCAGTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGWQSLF*SSSGGE
Trigger: CTCACCACCACTGGACGAGCAGAACAGGGACTGCCA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGTGGCCCTTGTCCTGTaGAGGTCTTGGCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRVALVL*RSWPPW
Trigger: CCATGGGGGCCAAGACCTGCACAGGACAAGGGCCAC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGGGTGAACGACACCACTaGTCCTTTCTACCCCCTAAT +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEGERHH*SFLPPN
Trigger: ATTAGGGGGTAGAAAGGAGCAGTGGTGTCGTTCACC...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCATCCCATTGCCCCCTaGCCCTATCAAGCTATACAA +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLHPIAP*PYQAIQ
Trigger: TTGTATAGCTTGATAGGGGCAGGGGGCAATGGGATG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTGTGCCCAGGAAAGGTaGCGTGAAGTACCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGCAQER*REVPAQ
Trigger: CTGGGCTGGTACTTCACGCCACCTTTCCTGGGCACA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCGTGTTGCTCGCTTaGAAGAGAAGAGTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLAVLLA*KRRVSR
Trigger: TCGAGAAACTCTTCTCTTCCAAGCGAGCAACACGGC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAATCGATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQSMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATCGA...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTTCTCCATCAGACCCTaGCAGTCCCTGTTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFFSIRP*QSLFCS
Trigger: CGAGCAGAACAGGGACTGCCAGGGTCTGATGGAGAA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGACTGTGGAGTTGGACTaGACAACAGGGGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPETVELD*TTGEGS
Trigger: ACTTCCTTCCCCTGTTGTCCAGTCCAACTCCACAGT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGAGCTCCTTGGCCAGGTaGTCTTCATTTTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPESSLAR*SSFSVL
Trigger: CAACACTGAAAATGAAGATCACCTGGCCAAGGAGCT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCTTCTTGCAGCAGTTTaGAACCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPELLAAV*NPQQGD
Trigger: ATCACCTTGCTGTGGGTTTCAAACTGCTGCAAGAAG...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCCTCGTCCAGTGGTGGTaGGGGACTTTGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFLVQWW*GTLRYH
Trigger: ATGATACCTCAAAGTCCCTCACCACCACTGGACGAG...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGCGTCTTTGTGCTGCTaGAATAGCTGTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFASLCC*NSCVPL
Trigger: GAGAGGGACACAGCTATTTCAGCAGCACAAAGACGC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTCAAGCCATGTGTCTTaGTCAGAATCGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGSSHVS*SESAPS
Trigger: GCTGGGGGCCGATTCTGATCAAGACACATGGCTTGA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGGAAGTTATTAGTCAGTaGGTTCAGTCACTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEEVISQ*VQSLSG
Trigger: CCCCGACAGTGACTGAACTCACTGACTAATAACTTC...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTGCAGACTCTCACGGTaGACGACACCACTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGCRLSR*TTPLLL
Trigger: AAGGAGCAGTGGTGTCGTTCACCGTGAGAGTCTGCA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCACAGTGTACCATGTTaGGAAGGACCTGAATGCGAT +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLHSVPC*EGPECD
Trigger: ATCGCATTCAGGTCCTTCGCAACATGGTACACTGTG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAGGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAGLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCC...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTTTAATACCTCAGGCTaGCCTCGCAGAAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGFNTSG*PRRSRP
Trigger: AGGGCGGCTTCTGCGAGGGCAGCCTGAGGTATTAAA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGCAGTGTGGTCGGCCTaGAAATACCATCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGAVWSA*KYHLPQ
Trigger: CTGAGGGAGATGGTATTTCCAGGCCGACCACACTGC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAACATCAAAGCACTCCTaGCTTACAGTTGTAATAGCA +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQTSKHS*LTVVIA
Trigger: TGCTATTACAACTGTAAGCCAGGAGTGCTTTGATGT...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACAGTGGACTCCGACCTaGGGAAGGGCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSQWTPT*GRAIFH
Trigger: GTGGAAAATGGCCCTTCCCCAGGTCGGAGTCCACTG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATGTGCCCAGGAAAGGTaGCGTGAAGTACCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSCAQER*REVPAQ
Trigger: CTGGGCTGGTACTTCACGCCACCTTTCCTGGGCACA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTACCGGTAGGTCTGTATaGTCTCTAGCTGGTCTAAAC +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLTGRSV*SLAGLN
Trigger: GTTTAGACCAGCTAGAGACCATACAGACCTACCGGT...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGGGTCTTCCAGCTCCTTaGCCAGGTGATCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEGLPAP*PGDLHF
Trigger: AAAATGAAGATCACCTGGCCAAGGAGCTGGAAGACC...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAAGGAGGTCTCTTTCCTaGAATATAGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQRRSLS*NIAYMM
Trigger: CATCATGTATGCTATATTCCAGGAAAGAGACCTCCT...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGTAGAAAGGAGAACATaGGTCGACTGGGCTACATCA +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLVERRT*VDWATS
Trigger: TGATGTAGCCCAGTCGACCCATGTTCTCCTTTCTAC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGGATCAACGTCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEDQRHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGACGTTGATC...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGAATCTCTGTTTTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQGISVF*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAAAACAGAGATTCC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAACTGTACAACTCCTGTaGGGGGCAGGGTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGTVQLL*GAGSKT
Trigger: TGTCTTGGACCCTGCCCCCCACAGGAGTTGTACAGT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGTCATTATTTGCACGCTaGCTCCTTCCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPESLFAR*LLPSSS
Trigger: AGAGCTGGAAGGAAGGAGCCAGCGTGCAAATAATGA...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR TCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTTGGAGACTCCAGGATaGTCAACGTCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFLETPG*STSWMA
Trigger: TGCCATCCATGACGTTGATCATCCTGGAGTCTCCAA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGCGTCTTTGTGCTGCTaGAATAGCTGTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGASLCC*NSCVPL
Trigger: GAGAGGGACACAGCTATTTCAGCAGCACAAAGACGC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGAAAGGGCAGACCCTTTaGACAAAAGCCCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGKGQTL*TKAHPC
Trigger: ACAGGGGTGGGCTTTTGTTCAAAGGGTCTGCCCTTT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAAAAGGGCAGACCCTTTaGACAAAAGCCCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGKGQTL*TKAHPC
Trigger: ACAGGGGTGGGCTTTTGTTCAAAGGGTCTGCCCTTT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAACTGAGTCACAATGCTaGACTGAAAGCATGAAACAT +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKATESQC*TESMKH
Trigger: ATGTTTCATGCTTTCAGTTCAGCATTGTGACTCAGT...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGATAAAATGTCCACCTaGAACAATGCAGTGTTCATA +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQDKMST*NNAVFI
Trigger: TATGAACACTGCATTGTTTCAGGTGGACATTTTATC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAATGTATGAGCCACAGTaGAGCGACGACGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESMYEPQ*SDDAAE
Trigger: TTCGGCAGCGTCGTCGCTTCACTGTGGCTCATACAT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR GCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGTGGGTCATGAGCTGCTaGTTTTTCTTTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEWVMSC*FFFFSL
Trigger: CAGGGAGAAAAAGAAAAAGCAGCAGCTCATGACCCA...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCAGGCTGTTGTGATATaGCACGTCAGAATGGTAATG +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEQAVVI*HVRMVM
Trigger: CATTACCATTCTGACGTGGCATATCACAACAGCCTG...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATGGCAGTCCCTGTTCTaGTCGTCCAGTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRWQSLF*SSSGGE
Trigger: CTCACCACCACTGGACGAGCAGAACAGGGACTGCCA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACTGAAGGTGCCCCCGTaGTCCTTCATTATTTGCACG +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGLKVPP*SFIICT
Trigger: CGTGCAAATAATGAAGGAGCACGGGGGCACCTTCAG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR GCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGTGAAGCGACGACGCTaGCGAATGCTTTTATTCACC +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFVKRRR*RMLLFT
Trigger: GGTGAATAAAAGCATTCGGCAGCGTCGTCGCTTCAC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGCAGTGTGGTCGGCCTaGAAATACCATCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESAVWSA*KYHLPQ
Trigger: CTGAGGGAGATGGTATTTCCAGGCCGACCACACTGC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGCGGAAGAGCTGGCCTaGGGATCCAGTGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMAEELA*GSSGLR
Trigger: TCGGAGTCCACTGGATCCCCAGGCCAGCTCTTCCGC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCAGGCTGACTAGCAGCTaGGGACCTCTTGTTAGATGT +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFRLTSS*GPLVRC
Trigger: ACATCTAACAAGAGGTCCCCAGCTGCTAGTCAGCCT...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEFTPLI*VMSCCF
Trigger: AAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAGGAATCTCTGTTTTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAGISVF*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAAAACAGAGATTCC...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAATATTGTTTCCAAAACTaGTTCATAAAGGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQYCFQN*FIKGLC
Trigger: GCACAACCCCTTTATGAACCAGTTTTGGAAACAATA...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAATTCATAGACATACATTaGTCATGCACATTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQFIDIH*SCTFVP
Trigger: TGGCACAAATGTGCATGACCAATGTATGTCTATGAA...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGTTAGGGGTCTATTGTaGGAATATCCAGCCACATTA +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLVRGLL*EYPATL
Trigger: TAATGTGGCTGGATATTCTCACAATAGACCCCTAAC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTTGGAGACTCCAGGATaGTCAACGTCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGLETPG*STSWMA
Trigger: TGCCATCCATGACGTTGATCATCCTGGAGTCTCCAA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGATCTTCCTGAGTGTCTaGCGCTGCTTCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGIFLSV*RCFLVR
Trigger: TCTCACCAAGAAGCAGCGTCAGACACTCAGGAAGAT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAATCTTCCTGAGTGTCTaGCGCTGCTTCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGIFLSV*RCFLVR
Trigger: TCTCACCAAGAAGCAGCGTCAGACACTCAGGAAGAT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGCGTCTTTGTGCTGCTaGAATAGCTGTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSASLCC*NSCVPL
Trigger: GAGAGGGACACAGCTATTTCAGCAGCACAAAGACGC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGAAGTTATTAGTCAGTaGGTTCAGTCACTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFEVISQ*VQSLSG
Trigger: CCCCGACAGTGACTGAACTCACTGACTAATAACTTC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAGTAACTGTAGTAAAGTaGAGGATATTGCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAVTVVK*RILPKK
Trigger: TTTCTTGGGCAATATCCTTCACTTTACTACAGTTAC...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACCAAGAAACTTCCTCTaGGGAAGAAGGCGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSPRNFL*GRRRRE
Trigger: TTCCCTCCGCCTTCTTCCTCAGAGGAAGTTTCTTGG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGTCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGVMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTTCACAGTGTTCTTCTTaGAGCAGTTTGAAACCCACA +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLSQCSS*SSLKPT
Trigger: TGTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGA...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCACCTCTCCACCAAGCTTaGCATCAAGGCAAGTCAACC +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESPLHQA*HQGKST
Trigger: GGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGG...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGTGAACGACACCACTaGTCCTTTCTACCCCCTAAT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGGERHH*SFLPPN
Trigger: ATTAGGGGGTAGAAAGGAGCAGTGGTGTCGTTCACC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGGATGTCATTTCTGAGTaGTTTGCCATCTCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEDVISE*FAISRR
Trigger: TCTCCTTGAGATGGCAAAGCACTCAGAAATGACATC...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR GCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGACGACGCTGCCGAATaGTTTTATTCACCAGCAACT +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFDDAAE*FYSPAT
Trigger: AGTTGCTGGTGAATAAAAGCATTCGGCAGCGTCGTC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTTGTCAAAGGCAGTGTaGTCGGCCTGGAAATACCAT +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFLSKAV*SAWKYH
Trigger: ATGGTATTTCCAGGCCGACCACACTGCCTTTGACAA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTTGTAATAGCAATGCTTaGAAGCGTTGTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLCNSNA*KRCQRQ
Trigger: CTGCCTTTGACAACGCTTCCAAGCATTGCTATTACA...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAAGGCTGACTAGCAGCTaGGGACCTCTTGTTAGATGT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGRLTSS*GPLVRC
Trigger: ACATCTAACAAGAGGTCCCCAGCTGCTAGTCAGCCT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTATAAGATTCTTCTTGTaGGTTGACTCTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLIRFFL*VDSGDR
Trigger: CCTGTCTCCAGAGTCAACCCACAAGAAGAATCTTAT...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGTAGAAAGGAGAACATaGGTCGACTGGGCTACATCA +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFVERRT*VDWATS
Trigger: TGATGTAGCCCAGTCGACCCATGTTCTCCTTTCTAC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATTCTCCATCAGACCCTaGCAGTCCCTGTTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRFSIRP*QSLFCS
Trigger: CGAGCAGAACAGGGACTGCCAGGGTCTGATGGAGAA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCAAAAGGCACACAGGTTaGCAGACAAAGGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFKRHTG*QTKGQV
Trigger: CACTTGTCCCTTTGTCTGCCAACCTGTGTGCCTTTT...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAACTGTACAACTCCTGTaGGGGGCAGGGTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRTVQLL*GAGSKT
Trigger: TGTCTTGGACCCTGCCCCCCACAGGAGTTGTACAGT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCATTCATAGACATACATTaGTCATGCACATTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: NRPPATASALSTKLAIKAFIDIH*SCTFVP
Trigger: TGGCACAAATGTGCATGACCAATGTATGTCTATGAA...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACACTGGAGACAGGAGGCTaGCTAGCAGCTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTLETGG*LAAGDL
Trigger: GAGGTCCCCAGCTGCTAGTCAGCCTCCTGTCTCCAG...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGGATCTCCAAATCTGTaGAGACAGCGTCTAATGCTG +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGGSPNL*RQRLML
Trigger: CAGCATTAGACGCTGTCTTCACAGATTTGGAGATCC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGATCTCCAAATCTGTaGAGACAGCGTCTAATGCTG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGGSPNL*RQRLML
Trigger: CAGCATTAGACGCTGTCTTCACAGATTTGGAGATCC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATTGGAGACTCCAGGATaGTCAACGTCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSLETPG*STSWMA
Trigger: TGCCATCCATGACGTTGATCATCCTGGAGTCTCCAA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGCTTCTTGCAGCAGTTTaGAACCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGLLAAV*NPQQGD
Trigger: ATCACCTTGCTGTGGGTTTCAAACTGCTGCAAGAAG...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACTTCTTGCAGCAGTTTaGAACCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGLLAAV*NPQQGD
Trigger: ATCACCTTGCTGTGGGTTTCAAACTGCTGCAAGAAG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAATCTTCCTGAGTGTCTaGCGCTGCTTCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSIFLSV*RCFLVR
Trigger: TCTCACCAAGAAGCAGCGTCAGACACTCAGGAAGAT...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGTATCGAGAATGTCCTaGGCATCAGGCTGTACCAAA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGVSRMS*ASGCTK
Trigger: TTTGGTACAGCCTGATGCTCAGGACATTCTCGATAC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACTCGTCCAGTGGTGGTaGGGGACTTTGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRLVQWW*GTLRYH
Trigger: ATGATACCTCAAAGTCCCTCACCACCACTGGACGAG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACCAAACTCAAGTAACTaGAAGGCCAGGTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRPNSSN*KARWPL
Trigger: CAAGGGCCACCTGGCCTTTCAGTTACTTGAGTTTGG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGAAGTTATTAGTCAGTaGGTTCAGTCACTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGEVISQ*VQSLSG
Trigger: CCCCGACAGTGACTGAACTCACTGACTAATAACTTC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAACGGCAGCATTACATTaGAAACAGCCTAACGGGGTG +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESTAALH*KQPNGV
Trigger: CACCCCGTTAGGCTGTTTTCAATGTAATGCTGCCGT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAACGGCAGCATTACATTaGAAACAGCCTAACGGGGTG +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSTAALH*KQPNGV
Trigger: CACCCCGTTAGGCTGTTTTCAATGTAATGCTGCCGT...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAACATCAAAGCATGTATaGGCCACAGTGAAGCGACGA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGTSKHV*ATVKRR
Trigger: TCGTCGCTTCACTGTGGCTCATACATGCTTTGATGT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTGGGTCATGAGCTGCTaGTTTTTCTTTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFWVMSC*FFFFSL
Trigger: CAGGGAGAAAAAGAAAAAGCAGCAGCTCATGACCCA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGTCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSVMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACACAGTGTACCATGTTaGGAAGGACCTGAATGCGAT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGHSVPC*EGPECD
Trigger: ATCGCATTCAGGTCCTTCGCAACATGGTACACTGTG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGATGCGGTCTGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGMRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACAGACCGCAT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAATGCGGTCTGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGMRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACAGACCGCAT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACGCTCTTTGTCTCCCTaGTGGAAAAATTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGRSLSP*WKNSSM
Trigger: CATGGAGGAATTTTTCCAGCAGGGAGACAAAGAGCG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAAGGCTGTACCAAATCTaGCCATGTCTCCCACAATGG +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSRLYQI*PCLPQW
Trigger: CCATTGTGGGAGACATGGGCAGATTTGGTACAGCCT...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAAGGCTGTACCAAATCTaGCCATGTCTCCCACAATGG +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESRLYQI*PCLPQW
Trigger: CCATTGTGGGAGACATGGGCAGATTTGGTACAGCCT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGTGGCCCTTGTCCTGTaGAGGTCTTGGCCCCCATGG +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTVALVL*RSWPPW
Trigger: CCATGGGGGCCAAGACCTGCACAGGACAAGGGCCAC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACCTCTCCACCAAGCTTaGCATCAAGGCAAGTCAACC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRPLHQA*HQGKST
Trigger: GGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTTCTCAGACTCTCTCTaGCTTAGTCATCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGFSDSL*LSHPRV
Trigger: AACCCTGGGATGACTAAGGCAGAGAGAGTCTGAGAA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGCTTGCAAGAAGCCTATaGTCCCTGCTTATTTCCTGG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGLARSL*SLLISW
Trigger: CCAGGAAATAAGCAGGGAGCATAGGCTTCTTGCAAG...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGCAGTGGACTCCGACCTaGGGAAGGGCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMQWTPT*GRAIFH
Trigger: GTGGAAAATGGCCCTTCCCCAGGTCGGAGTCCACTG...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGCCGTGTTGCTCGCTTaGAAGAGAAGAGTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSAVLLA*KRRVSR
Trigger: TCGAGAAACTCTTCTCTTCCAAGCGAGCAACACGGC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAAAGCTGGCAAGGACCTaGGCAAAAGGAGTTACAATC +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGKLART*AKGVTI
Trigger: GATTGTAACTCCTTTTGCCCAGGTCCTTGCCAGCTT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAAGGCTGACTAGCAGCTaGGGACCTCTTGTTAGATGT +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSRLTSS*GPLVRC
Trigger: ACATCTAACAAGAGGTCCCCAGCTGCTAGTCAGCCT...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGATGTATTCAGACACCTaGTTCCCTGATCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGMYSDT*FPDRLI
Trigger: GATGAGCCGATCAGGGAACCAGGTGTCTGAATACAT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFFTPLI*VMSCCF
Trigger: AAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGTCTTCCAGCTCCTTaGCCAGGTGATCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGGLPAP*PGDLHF
Trigger: AAAATGAAGATCACCTGGCCAAGGAGCTGGAAGACC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTAGGAGGTCTCTTTCCTaGAATATAGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLRRSLS*NIAYMM
Trigger: CATCATGTATGCTATATTCCAGGAAAGAGACCTCCT...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGATCAACGTCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGDQRHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGACGTTGATC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGGAATCTCTGTTTTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLGISVF*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAAAACAGAGATTCC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCCTGCTATTTGCTTCCTaGTCTTGCTTTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFLLFAS*SCFLTP
Trigger: TGGAGTCAGAAAGCAAGACCAGGAAGCAAATAGCAG...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAACTGTGGAGTTGGACTaGACAACAGGGGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESTVELD*TTGEGS
Trigger: ACTTCCTTCCCCTGTTGTCCAGTCCAACTCCACAGT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTTGCCTCAGGCATTTTaGAATGCTCTCCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGLPQAF*NALLAT
Trigger: TGTGGCAAGGAGAGCATTCCAAAATGCCTGAGGCAA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGCTTTCACTCTGTCTTTaGGACAGTGGTGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGLSLCL*DSGGNC
Trigger: ACAGTTACCACCACTGTCTCAAAGACAGAGTGAAAG...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACTTCATTTTCAGTGTTaGCTCCAAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGLHFQC*LQSVRC
Trigger: GCATCTCACGCTTTGGAGTCAACACTGAAAATGAAG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGTTAGGGGTCTATTGTaGGAATATCCAGCCACATTA +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFVRGLL*EYPATL
Trigger: TAATGTGGCTGGATATTCTCACAATAGACCCCTAAC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCACTTCTTGCAGCAGTTTaGAACCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESLLAAV*NPQQGD
Trigger: ATCACCTTGCTGTGGGTTTCAAACTGCTGCAAGAAG...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACTTCTTGCAGCAGTTTaGAACCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSLLAAV*NPQQGD
Trigger: ATCACCTTGCTGTGGGTTTCAAACTGCTGCAAGAAG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGAAAAATTCCTCCATaGTGCGGTCTGTCCATTGCC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRGKIPP*CGLSIA
Trigger: GGCAATGGACAGACCGCATCATGGAGGAATTTTTCC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGTATCGAGAATGTCCTaGGCATCAGGCTGTACCAAA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSVSRMS*ASGCTK
Trigger: TTTGGTACAGCCTGATGCTCAGGACATTCTCGATAC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGTATCGAGAATGTCCTaGGCATCAGGCTGTACCAAA +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESVSRMS*ASGCTK
Trigger: TTTGGTACAGCCTGATGCTCAGGACATTCTCGATAC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTAAACTTAGTGCAGAATaGTCTCTCAGTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLKLSAE*SLSFVS
Trigger: AGACACAAAACTGAGAGATCATTCTGCACTAAGTTT...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGAAACTTAGTGCAGAATaGTCTCTCAGTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEKLSAE*SLSFVS
Trigger: AGACACAAAACTGAGAGATCATTCTGCACTAAGTTT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGAATGCATTTGCTCCTTaGAAGTCTTTATGCAAACCT +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPENAFAP*KSLCKP
Trigger: AGGTTTGCATAAAGACTTTCAAGGAGCAAATGCATT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGAAATTCTTCTTTCCTaGGGAGTTGCCAGACTAGGA +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGEILLS*GVARLG
Trigger: TCCTAGTCTGGCAACTCCTCAGGAAAGAAGAATTTC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAAGCACTTATGAATTATaGATAGCCCTGGTGGCCGAA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGSTYEL*IALVAE
Trigger: TTCGGCCACCAGGGCTATTCATAATTCATAAGTGCT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTGGGTCATGAGCTGCTaGTTTTTCTTTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGWVMSC*FFFFSL
Trigger: CAGGGAGAAAAAGAAAAAGCAGCAGCTCATGACCCA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACAGGCTGTTGTGATATaGCACGTCAGAATGGTAATG +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGQAVVI*HVRMVM
Trigger: CATTACCATTCTGACGTGGCATATCACAACAGCCTG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTCACAGTGTTCTTCTTaGAGCAGTTTGAAACCCACA +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFSQCSS*SSLKPT
Trigger: TGTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTGCGAAGGACCTGAATaGGATCGGTATAGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGCEGPE*DRYSCL
Trigger: TAGACAACTATACCGATCGCATTCAGGTCCTTCGCA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGATGCGAAGGACCTGAATaGGATCGGTATAGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGCEGPE*DRYSCL
Trigger: TAGACAACTATACCGATCGCATTCAGGTCCTTCGCA...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACACAGTGTACCATGTTaGGAAGGACCTGAATGCGAT +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSHSVPC*EGPECD
Trigger: ATCGCATTCAGGTCCTTCGCAACATGGTACACTGTG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAATGCGGTCTGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESMRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACAGACCGCAT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAGGCTGTACCAAATCTaGCCATGTCTCCCACAATGG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRRLYQI*PCLPQW
Trigger: CCATTGTGGGAGACATGGGCAGATTTGGTACAGCCT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGTGAACGACACCACTaGTCCTTTCTACCCCCTAAT +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRGERHH*SFLPPN
Trigger: ATTAGGGGGTAGAAAGGAGCAGTGGTGTCGTTCACC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGATTCATAAAGGGGTTGTaGAGAAGTAGCAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGFIKGL*RSSNSG
Trigger: GCCTGAGTTGCTACTTCTGCACAACCCCTTTATGAA...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTTCATAAAGGGGTTGTaGAGAAGTAGCAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGFIKGL*RSSNSG
Trigger: GCCTGAGTTGCTACTTCTGCACAACCCCTTTATGAA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTCAGGCATTTTGGAATaGTCTCCTTGCCACAATCCA +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGSGILE*SPCHNP
Trigger: TGGATTGTGGCAAGGAGAGCATTCCAAAATGCCTGA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGATTTCTGGGTAGGAGATaGGATCTCCACATCATTCTG +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGFLGRR*DLHIIL
Trigger: CAGAATGATGTGGAGATCCCATCTCCTACCCAGAAA...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGATTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGFTPLI*VMSCCF
Trigger: AAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGFTPLI*VMSCCF
Trigger: AAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGATCAACGTCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSDQRHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGACGTTGATC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGTTCTCCATCAGACCCTaGCAGTCCCTGTTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMFSIRP*QSLFCS
Trigger: CGAGCAGAACAGGGACTGCCAGGGTCTGATGGAGAA...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGTCCTGTGCAGGTCTTaGCCCCCATGGTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKVLCRS*PPWWAG
Trigger: GCCAGCCCACCATGGGGGCCAAGACCTGCACAGGAC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAAAAAGGCACACAGGTTaGCAGACAAAGGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESKRHTG*QTKGQV
Trigger: CACTTGTCCCTTTGTCTGCCAACCTGTGTGCCTTTT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAGCTCCTTGGCCAGGTaGTCTTCATTTTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRSSLAR*SSFSVL
Trigger: CAACACTGAAAATGAAGATCACCTGGCCAAGGAGCT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGGACAATGTAGTCGATaGAACCAACCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGGQCSR*NQPGIF
Trigger: AAAAATCCCAGGTTGGTTTCATCGACTACATTGTCC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACAATGTAGTCGATaGAACCAACCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGGQCSR*NQPGIF
Trigger: AAAAATCCCAGGTTGGTTTCATCGACTACATTGTCC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGCGTCTTTGTGCTGCTaGAATAGCTGTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMASLCC*NSCVPL
Trigger: GAGAGGGACACAGCTATTTCAGCAGCACAAAGACGC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGAAAGGGCAGACCCTTTaGACAAAAGCCCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMKGQTL*TKAHPC
Trigger: ACAGGGGTGGGCTTTTGTTCAAAGGGTCTGCCCTTT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACTCCAAAGCGTGAGATaGTTGTATTGTTTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGLQSVR*LYCLGL
Trigger: CAAGCCTAAACAATACAAGCATCTCACGCTTTGGAG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACAGGCTGTTGTGATATaGCACGTCAGAATGGTAATG +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSQAVVI*HVRMVM
Trigger: CATTACCATTCTGACGTGGCATATCACAACAGCCTG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTCACAGTGTTCTTCTTaGAGCAGTTTGAAACCCACA +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGSQCSS*SSLKPT
Trigger: TGTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATGCGAAGGACCTGAATaGGATCGGTATAGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESCEGPE*DRYSCL
Trigger: TAGACAACTATACCGATCGCATTCAGGTCCTTCGCA...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATGCGAAGGACCTGAATaGGATCGGTATAGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSCEGPE*DRYSCL
Trigger: TAGACAACTATACCGATCGCATTCAGGTCCTTCGCA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACGCTCTTTGTCTCCCTaGTGGAAAAATTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRRSLSP*WKNSSM
Trigger: CATGGAGGAATTTTTCCAGCAGGGAGACAAAGAGCG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGACTTTGAGGTATCATaGTCTGATACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGDFEVS*SDTSSC
Trigger: ACAGGAACTGGTATCAGAGCATGATACCTCAAAGTC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGACTTTGAGGTATCATaGTCTGATACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGDFEVS*SDTSSC
Trigger: ACAGGAACTGGTATCAGAGCATGATACCTCAAAGTC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGGLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTTTGCTTCCTGGTCTTaGTTTCTGACTCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGFASWS*FLTPNS
Trigger: TGAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATGGATGAGGTTTGTCTaGAAGCTACACACTGACACT +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSWMRFV*KLHTDT
Trigger: AGTGTCAGTGTGTAGCTTGCAGACAAACCTCATCCA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGAAGCCTATGCTCCCTaGTTATTTCCTGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGREAYAP*LFPGRR
Trigger: TCTTCTGCCAGGAAATAAGCAGGGAGCATAGGCTTC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATTCGCACTCCATTCTTaGAAGAAGCCTATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRFALHS*KKPMLP
Trigger: AGGGAGCATAGGCTTCTTGCAAGAATGGAGTGCGAA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTCCCAAGTGTGTTACTaGAAGAACTGTAGGATTTAC +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFSQVCY*KNCRIY
Trigger: GTAAATCCTACAGTTCTTCCAGTAACACACTTGGGA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTGTAATAGCAATGCTTaGAAGCGTTGTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGCNSNA*KRCQRQ
Trigger: CTGCCTTTGACAACGCTTCCAAGCATTGCTATTACA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCACATCAAAGCACTCCTaGCTTACAGTTGTAATAGCA +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFTSKHS*LTVVIA
Trigger: TGCTATTACAACTGTAAGCCAGGAGTGCTTTGATGT...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAAGCTGGCAAGGACCTaGGCAAAAGGAGTTACAATC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRKLART*AKGVTI
Trigger: GATTGTAACTCCTTTTGCCCAGGTCCTTGCCAGCTT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGTCACACTTCGCAAGCTaGCAAGGACCTGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMSHFAS*QGPGQK
Trigger: CTTTTGCCCAGGTCCTTGCCAGCTTGCGAAGTGTGA...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGATAAGATTCTTCTTGTaGGTTGACTCTGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGIRFFL*VDSGDR
Trigger: CCTGTCTCCAGAGTCAACCCACAAGAAGAATCTTAT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAATGTATTCAGACACCTaGTTCCCTGATCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRMYSDT*FPDRLI
Trigger: GATGAGCCGATCAGGGAACCAGGTGTCTGAATACAT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATTTCTGGGTAGGAGATaGGATCTCCACATCATTCTG +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESFLGRR*DLHIIL
Trigger: CAGAATGATGTGGAGATCCCATCTCCTACCCAGAAA...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATTTCTGGGTAGGAGATaGGATCTCCACATCATTCTG +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSFLGRR*DLHIIL
Trigger: CAGAATGATGTGGAGATCCCATCTCCTACCCAGAAA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSFTPLI*VMSCCF
Trigger: AAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGTCTTCCAGCTCCTTaGCCAGGTGATCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRGLPAP*PGDLHF
Trigger: AAAATGAAGATCACCTGGCCAAGGAGCTGGAAGACC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGTAGAAAGGAGAACATaGGTCGACTGGGCTACATCA +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRVERRT*VDWATS
Trigger: TGATGTAGCCCAGTCGACCCATGTTCTCCTTTCTAC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGATCAACGTCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRDQRHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGACGTTGATC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGATCGATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGSMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATCGA...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTCGATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGSMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATCGA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGGAATCTCTGTTTTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFGISVF*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAAAACAGAGATTCC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGAGGTCTTGGCCCCCATaGTGGGCTGGCCCTACCACA +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKRSWPP*WAGPTT
Trigger: TGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACCT...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACTGCTATTTGCTTCCTaGTCTTGCTTTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSLLFAS*SCFLTP
Trigger: TGGAGTCAGAAAGCAAGACCAGGAAGCAAATAGCAG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGAAGGAAGTAAAATGTaGTTAGAAGTGTATCCTTTC +
Preference number: 4 (lower is better)
Translates to: CLDQNRPPATASALSTKLEGSKM*LEVYPF
Trigger: GAAAGGATACACTTCTAACCACATTTTACTTCCTTC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGGAAGGAAGTAAAATGTaGTTAGAAGTGTATCCTTTC +
Preference number: 4 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEEGSKM*LEVYPF
Trigger: GAAAGGATACACTTCTAACCACATTTTACTTCCTTC...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGTTGGAGACTCCAGGATaGTCAACGTCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMLETPG*STSWMA
Trigger: TGCCATCCATGACGTTGATCATCCTGGAGTCTCCAA...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGGACAATGTAGTCGATaGAACCAACCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESGQCSR*NQPGIF
Trigger: AAAAATCCCAGGTTGGTTTCATCGACTACATTGTCC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACATCAAGCCATGTGTCTTaGTCAGAATCGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTSSHVS*SESAPS
Trigger: GCTGGGGGCCGATTCTGATCAAGACACATGGCTTGA...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACATGCAGACTCTCACGGTaGACGACACCACTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTCRLSR*TTPLLL
Trigger: AAGGAGCAGTGGTGTCGTTCACCGTGAGAGTCTGCA...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTTCAATGCAGTTTGCTaGCACTTTTTAATACCTCAG +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFFNAVC*HFLIPQ
Trigger: CTGAGGTATTAAAAAGTGTCAGCAAACTGCATTGAA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS-3UTR TCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGATAAAATGTCCACCTaGAACAATGCAGTGTTCATA +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFDKMST*NNAVFI
Trigger: TATGAACACTGCATTGTTTCAGGTGGACATTTTATC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACTGCAAGCTACACACTaGCACTCACTGAATTCATTC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRLQATH*HSLNSF
Trigger: GAATGAATTCAGTGAGTGTCAGTGTGTAGCTTGCAG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR TCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAAGAATTCACAGTTCTaGGAGAGCAATCCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRKNSQF*ESNPER
Trigger: CCTTTCGGGATTGCTCTCTCAGAACTGTGAATTCTT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR GCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATCACAGTGTTCTTCTTaGAGCAGTTTGAAACCCACA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSSQCSS*SSLKPT
Trigger: TGTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGAGGCTGTACCAAATCTaGCCATGTCTCCCACAATGG +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMRLYQI*PCLPQW
Trigger: CCATTGTGGGAGACATGGGCAGATTTGGTACAGCCT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGACTTTGAGGTATCATaGTCTGATACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSDFEVS*SDTSSC
Trigger: ACAGGAACTGGTATCAGAGCATGATACCTCAAAGTC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGCATCCCATTGCCCCCTaGCCCTATCAAGCTATACAA +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMHPIAP*PYQAIQ
Trigger: TTGTATAGCTTGATAGGGGCAGGGGGCAATGGGATG...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGACATACATTGGTCATaGACATTTGTGCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFDIHWS*TFVPFS
Trigger: AGAAAATGGCACAAATGTGCATGACCAATGTATGTC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGTCCACCTGAAACAATaGAGTGTTCATAGACATACA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGVHLKQ*SVHRHT
Trigger: TGTATGTCTATGAACACTGCATTGTTTCAGGTGGAC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGGATCAGGAAAGCCCTaGAGATTCAGTGATAAAATA +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGGSGKP*RFSDKI
Trigger: TATTTTATCACTGAATCTGCAGGGCTTTCCTGATCC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATTGGAATGCTCTCCTTaGCACAATCCACAAATCCCT +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRLECSP*HNPQIP
Trigger: AGGGATTTGTGGATTGTGGCAAGGAGAGCATTCCAA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATTTCTGGGTAGGAGATaGGATCTCCACATCATTCTG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRFLGRR*DLHIIL
Trigger: CAGAATGATGTGGAGATCCCATCTCCTACCCAGAAA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGAGGAGGTCTCTTTCCTaGAATATAGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGRRSLS*NIAYMM
Trigger: CATCATGTATGCTATATTCCAGGAAAGAGACCTCCT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCGATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESSMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATCGA...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACTGCTATTTGCTTCCTaGTCTTGCTTTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRLLFAS*SCFLTP
Trigger: TGGAGTCAGAAAGCAAGACCAGGAAGCAAATAGCAG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTATTGTTTCCAAAACTaGTTCATAAAGGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFYCFQN*FIKGLC
Trigger: GCACAACCCCTTTATGAACCAGTTTTGGAAACAATA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTTCAATGCAGTTTGCTaGCACTTTTTAATACCTCAC +
Preference number: 4 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGFNAVC*HFLIPH
Trigger: GTGAGGTATTAAAAAGTGTCAGCAAACTGCATTGAA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329654.8
CDS-3UTR TCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGAGCTCCTTGGCCAGGTaGTCTTCATTTTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMSSLAR*SSFSVL
Trigger: CAACACTGAAAATGAAGATCACCTGGCCAAGGAGCT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGTTAGGGGTCTATTGTaGGAATATCCAGCCACATTA +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRVRGLL*EYPATL
Trigger: TAATGTGGCTGGATATTCTCACAATAGACCCCTAAC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGACAATGTAGTCGATaGAACCAACCTGGGATTTTT +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRGQCSR*NQPGIF
Trigger: AAAAATCCCAGGTTGGTTTCATCGACTACATTGTCC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGTGCAGACTCTCACGGTaGACGACACCACTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVCRLSR*TTPLLL
Trigger: AAGGAGCAGTGGTGTCGTTCACCGTGAGAGTCTGCA...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACTCCAAAGCGTGAGATaGTTGTATTGTTTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRLQSVR*LYCLGL
Trigger: CAAGCCTAAACAATACAAGCATCTCACGCTTTGGAG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGCGCTCTTTGTCTCCCTaGTGGAAAAATTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMRSLSP*WKNSSM
Trigger: CATGGAGGAATTTTTCCAGCAGGGAGACAAAGAGCG...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGCAGTCCCTGTTCTaGTCGTCCAGTGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKWQSLF*SSSGGE
Trigger: CTCACCACCACTGGACGAGCAGAACAGGGACTGCCA...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRGLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCACCCCTGTCCTCTCTaGCAAGGGGGCCATATGTCT +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKHPCPL*QGGHMS
Trigger: AGACATATGGCCCCCTTGGCAGAGAGGACAGGGGTG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAAAGAGGCTTCACATTTaGGTAATTTGCTACATCAGT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGKRLHI*VICYIS
Trigger: ACTGATGTAGCAAATTACGCAAATGTGAAGCCTCTT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGACATACATTGGTCATaGACATTTGTGCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGDIHWS*TFVPFS
Trigger: AGAAAATGGCACAAATGTGCATGACCAATGTATGTC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGTCCACCTGAAACAATaGAGTGTTCATAGACATACA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSVHLKQ*SVHRHT
Trigger: TGTATGTCTATGAACACTGCATTGTTTCAGGTGGAC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGGTCTTCCAGCTCCTTaGCCAGGTGATCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMGLPAP*PGDLHF
Trigger: AAAATGAAGATCACCTGGCCAAGGAGCTGGAAGACC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGATCAACGTCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMDQRHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGACGTTGATC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGAAGGCAAGTCAACCGTaGGATTTCCTGAGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMKASQP*DFLSCY
Trigger: ATAGCAGCTCAGGAAATCCCACGGTTGACTTGCCTT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGCTTTCACTCTGTCTTTaGGACAGTGGTGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMLSLCL*DSGGNC
Trigger: ACAGTTACCACCACTGTCTCAAAGACAGAGTGAAAG...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGGAAAAATTCCTCCATaGTGCGGTCTGTCCATTGCC +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTGKIPP*CGLSIA
Trigger: GGCAATGGACAGACCGCATCATGGAGGAATTTTTCC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGCTCGTCCAGTGGTGGTaGGGGACTTTGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVLVQWW*GTLRYH
Trigger: ATGATACCTCAAAGTCCCTCACCACCACTGGACGAG...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAAAACTTAGTGCAGAATaGTCTCTCAGTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESKLSAE*SLSFVS
Trigger: AGACACAAAACTGAGAGATCATTCTGCACTAAGTTT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGTAACTGTAGTAAAGTaGAGGATATTGCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSVTVVK*RILPKK
Trigger: TTTCTTGGGCAATATCCTTCACTTTACTACAGTTAC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAACGGCAGCATTACATTaGAAACAGCCTAACGGGGTG +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTTAALH*KQPNGV
Trigger: CACCCCGTTAGGCTGTTTTCAATGTAATGCTGCCGT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGTCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTVMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACACATCCCATTGCCCCCTaGCCCTATCAAGCTATACAA +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTHPIAP*PYQAIQ
Trigger: TTGTATAGCTTGATAGGGGCAGGGGGCAATGGGATG...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATCCCAAGTGTGTTACTaGAAGAACTGTAGGATTTAC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRSQVCY*KNCRIY
Trigger: GTAAATCCTACAGTTCTTCCAGTAACACACTTGGGA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAGGAGGTCTCTTTCCTaGAATATAGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRRRSLS*NIAYMM
Trigger: CATCATGTATGCTATATTCCAGGAAAGAGACCTCCT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGAATCTCTGTTTTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRGISVF*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAAAACAGAGATTCC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGACTGTACAACTCCTGTaGGGGGCAGGGTCCAAGACA +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKTVQLL*GAGSKT
Trigger: TGTCTTGGACCCTGCCCCCCACAGGAGTTGTACAGT...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGATTTGGATAGAACCTaGGTAAAAACTACATCCCAT +
Preference number: 4 (lower is better)
Translates to: RQEATSSKSVVREHSEESDLDRT*VKTTSH
Trigger: ATGGGATGTAGTTTTTACCCAGGTTCTATCCAAATC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAAGCTCCTTGGCCAGGTaGTCTTCATTTTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTSSLAR*SSFSVL
Trigger: CAACACTGAAAATGAAGATCACCTGGCCAAGGAGCT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGTTGGAGACTCCAGGATaGTCAACGTCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVLETPG*STSWMA
Trigger: TGCCATCCATGACGTTGATCATCCTGGAGTCTCCAA...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCCAAACTCAAGTAACTaGAAGGCCAGGTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKPNSSN*KARWPL
Trigger: CAAGGGCCACCTGGCCTTTCAGTTACTTGAGTTTGG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGTCCCTCAGGAGTCCTTaGCCTTTCACTCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVSLRSP*PFTLSL
Trigger: CAAAGACAGAGTGAAAGGGCAAGGACTCCTGAGGGA...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR GCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGTCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVVMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAC...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGTCACAGTGTTCTTCTTaGAGCAGTTTGAAACCCACA +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMSQCSS*SSLKPT
Trigger: TGTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGA...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACACGCTCTTTGTCTCCCTaGTGGAAAAATTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTRSLSP*WKNSSM
Trigger: CATGGAGGAATTTTTCCAGCAGGGAGACAAAGAGCG...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGTCACTTGTTTTGTTTaGACAAAGAGCAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMVTCFV*TKSRPR
Trigger: TCTGGGTCTGCTCTTTGTGCAAACAAAACAAGTGAC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR CCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAATGTATTCAGACACCTaGTTCCCTGATCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTMYSDT*FPDRLI
Trigger: GATGAGCCGATCAGGGAACCAGGTGTCTGAATACAT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAAAAAGGCACACAGGTTaGCAGACAAAGGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTKRHTG*QTKGQV
Trigger: CACTTGTCCCTTTGTCTGCCAACCTGTGTGCCTTTT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATATTGTTTCCAAAACTaGTTCATAAAGGGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRYCFQN*FIKGLC
Trigger: GCACAACCCCTTTATGAACCAGTTTTGGAAACAATA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACACTTCATTTTCAGTGTTaGCTCCAAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTLHFQC*LQSVRC
Trigger: GCATCTCACGCTTTGGAGTCAACACTGAAAATGAAG...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGGATCTCCAAATCTGTaGAGACAGCGTCTAATGCTG +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVGSPNL*RQRLML
Trigger: CAGCATTAGACGCTGTCTTCACAGATTTGGAGATCC...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGATCTTCCTGAGTGTCTaGCGCTGCTTCTTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKIFLSV*RCFLVR
Trigger: TCTCACCAAGAAGCAGCGTCAGACACTCAGGAAGAT...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGTATCGAGAATGTCCTaGGCATCAGGCTGTACCAAA +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVVSRMS*ASGCTK
Trigger: TTTGGTACAGCCTGATGCTCAGGACATTCTCGATAC...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGTGGATGAGGTGTCGGTaGTCTACCAAGAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVWMRCR*STKKLP
Trigger: AGGAAGTTTCTTGGTAGATCACCGACACCTCATCCA...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTCCCTCAGGAGTCCTTaGCCTTTCACTCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKSLRSP*PFTLSL
Trigger: CAAAGACAGAGTGAAAGGGCAAGGACTCCTGAGGGA...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACACAGGCTGTTGTGATATaGCACGTCAGAATGGTAATG +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTQAVVI*HVRMVM
Trigger: CATTACCATTCTGACGTGGCATATCACAACAGCCTG...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGTCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKVMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGCACAGTGTACCATGTTaGGAAGGACCTGAATGCGAT +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVHSVPC*EGPECD
Trigger: ATCGCATTCAGGTCCTTCGCAACATGGTACACTGTG...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGCGCTCTTTGTCTCCCTaGTGGAAAAATTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVRSLSP*WKNSSM
Trigger: CATGGAGGAATTTTTCCAGCAGGGAGACAAAGAGCG...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGCCGTGTTGCTCGCTTaGAAGAGAAGAGTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKAVLLA*KRRVSR
Trigger: TCGAGAAACTCTTCTCTTCCAAGCGAGCAACACGGC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGACCGGTAGGTCTGTATaGTCTCTAGCTGGTCTAAAC +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVTGRSV*SLAGLN
Trigger: GTTTAGACCAGCTAGAGACCATACAGACCTACCGGT...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGATGTATTCAGACACCTaGTTCCCTGATCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVMYSDT*FPDRLI
Trigger: GATGAGCCGATCAGGGAACCAGGTGTCTGAATACAT...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGAAGGAAGTAAAATGTaGTTAGAAGTGTATCCTTTC +
Preference number: 4 (lower is better)
Translates to: YHIAGMLIKDRMFISTGREGSKM*LEVYPF
Trigger: GAAAGGATACACTTCTAACCACATTTTACTTCCTTC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGACTGTGGAGTTGGACTaGACAACAGGGGAAGGAAGT +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKTVELD*TTGEGS
Trigger: ACTTCCTTCCCCTGTTGTCCAGTCCAACTCCACAGT...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGCTTCATTTTCAGTGTTaGCTCCAAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVLHFQC*LQSVRC
Trigger: GCATCTCACGCTTTGGAGTCAACACTGAAAATGAAG...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGGATCTCCAAATCTGTaGAGACAGCGTCTAATGCTG +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKGSPNL*RQRLML
Trigger: CAGCATTAGACGCTGTCTTCACAGATTTGGAGATCC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGTATCGAGAATGTCCTaGGCATCAGGCTGTACCAAA +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKVSRMS*ASGCTK
Trigger: TTTGGTACAGCCTGATGCTCAGGACATTCTCGATAC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGTAACTGTAGTAAAGTaGAGGATATTGCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMVTVVK*RILPKK
Trigger: TTTCTTGGGCAATATCCTTCACTTTACTACAGTTAC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGATGCGGTCTGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKMRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACAGACCGCAT...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGACTTTGAGGTATCATaGTCTGATACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTDFEVS*SDTSSC
Trigger: ACAGGAACTGGTATCAGAGCATGATACCTCAAAGTC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTGLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGAAGAGGCTTCACATTTaGGTAATTTGCTACATCAGT +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMKRLHI*VICYIS
Trigger: ACTGATGTAGCAAATTACGCAAATGTGAAGCCTCTT...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACATCGATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTSMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATCGA...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGCTGCTATTTGCTTCCTaGTCTTGCTTTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVLLFAS*SCFLTP
Trigger: TGGAGTCAGAAAGCAAGACCAGGAAGCAAATAGCAG...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGAAAAGGCACACAGGTTaGCAGACAAAGGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKKRHTG*QTKGQV
Trigger: CACTTGTCCCTTTGTCTGCCAACCTGTGTGCCTTTT...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCTTCATTTTCAGTGTTaGCTCCAAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKLHFQC*LQSVRC
Trigger: GCATCTCACGCTTTGGAGTCAACACTGAAAATGAAG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGTTAGGGGTCTATTGTaGGAATATCCAGCCACATTA +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVVRGLL*EYPATL
Trigger: TAATGTGGCTGGATATTCTCACAATAGACCCCTAAC...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCAGGCTGTTGTGATATaGCACGTCAGAATGGTAATG +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKQAVVI*HVRMVM
Trigger: CATTACCATTCTGACGTGGCATATCACAACAGCCTG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTTCATAAAGGGGTTGTaGAGAAGTAGCAACTCAGGC +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKFIKGL*RSSNSG
Trigger: GCCTGAGTTGCTACTTCTGCACAACCCCTTTATGAA...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGTTGATAAGATTCTTCTaGAAACAAACACACAGGCAT +
Preference number: 4 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMLIRFF*KQTHRH
Trigger: ATGCCTGTGTGTTTGTTTGCAGAAGAATCTTATCAA...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR TCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACATTGTTAGATGTACCATaGAGGTTTGTCAGTATAGTG +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTLLDVP*RFVSIV
Trigger: CACTATACTGACAAACCTTCATGGTACATCTAACAA...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGACTGAGTCACAATGCTaGACTGAAAGCATGAAACAT +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVTESQC*TESMKH
Trigger: ATGTTTCATGCTTTCAGTTCAGCATTGTGACTCAGT...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGCACACTGACACTCACTaGATTCATTCAGCTGAATAT +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVHTDTH*IHSAEY
Trigger: ATATTCAGCTGAATGAATTCAGTGAGTGTCAGTGTG...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR GCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTTTGCTTCCTGGTCTTaGTTTCTGACTCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKFASWS*FLTPNS
Trigger: TGAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAA...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAAAGAGGCTTCACATTTaGGTAATTTGCTACATCAGT +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTKRLHI*VICYIS
Trigger: ACTGATGTAGCAAATTACGCAAATGTGAAGCCTCTT...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR GCA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGACATACATTGGTCATaGACATTTGTGCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTDIHWS*TFVPFS
Trigger: AGAAAATGGCACAAATGTGCATGACCAATGTATGTC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGACTGAGTCACAATGCTaGACTGAAAGCATGAAACAT +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKTESQC*TESMKH
Trigger: ATGTTTCATGCTTTCAGTTCAGCATTGTGACTCAGT...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGATTTGGATAGAACCTaGGTAAAAACTACATCCCAT +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVDLDRT*VKTTSH
Trigger: ATGGGATGTAGTTTTTACCCAGGTTCTATCCAAATC...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CCA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGTTCATAGACATACATTaGTCATGCACATTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVFIDIH*SCTFVP
Trigger: TGGCACAAATGTGCATGACCAATGTATGTCTATGAA...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTTGTTAGATGTACCATaGAGGTTTGTCAGTATAGTG +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKLLDVP*RFVSIV
Trigger: CACTATACTGACAAACCTTCATGGTACATCTAACAA...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGTAACTGTAGTAAAGTaGAGGATATTGCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKVTVVK*RILPKK
Trigger: TTTCTTGGGCAATATCCTTCACTTTACTACAGTTAC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR TCA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGATAAAATGTCCACCTaGAACAATGCAGTGTTCATA +
Preference number: 4 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKDKMST*NNAVFI
Trigger: TATGAACACTGCATTGTTTCAGGTGGACATTTTATC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS GCA 90 bp AGGCTGCCCTCGCAGAAGCCGCCCTCCTCCTGCCCGAGGCGCCTCTaGTGCACCGCCGCGGCCGCAGCGCTCTGGACGCCGGGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RLPSQKPPSSCPRRL*CTAAAAALWTPGLR
Trigger: GCGGAGCCCCGGCGTCCAGAGCGCTGCGGCCGCGGCGGTGCAGCAGAGGCGCCTCGGGCAGGAGGAGGGCGGCTTCTGCGAGGGCAGCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS GCA 90 bp GCTCCCGGGGGTGGGGGACGAAAGTCTGCCCGGAGGGCGCTCGCGTaGAGCCCGGCCCGCGACGAAGAGCCTGCAGCCGCTGAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: APGGGGRKSARRALA*SPARDEEPAAAEAR
Trigger: CCTCGCCTCAGCGGCTGCAGGCTCTTCGTCGCGGGCCGGGCTGCACGCGAGCGCCCTCCGGGCAGACTTTCGTCCCCCACCCCCGGGAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS GCA 90 bp CTGCGAGTGAGCCTTCCGCGCTCCCGGGGGTGGGGGACGAAAGTCTaGCCGGAGGGCGCTCGCGTGCAGCCCGGCCCGCGACGAAGAGCC +
Preference number: 5 (lower is better)
Translates to: LRVSLPRSRGWGTKV*PEGARVQPGPRRRA
Trigger: GGCTCTTCGTCGCGGGCCGGGCTGCACGCGAGCGCCCTCCGGGCAGACTTTCGTCCCCCACCCCCGGGAGCGCGGAAGGCTCACTCGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS CCA 90 bp CGGGTAGACCATGCGCTGCGAGTGAGCCTTCCGCGCTCCCGGGGGTaGGGGACGAAAGTCTGCCCGGAGGGCGCTCGCGTGCAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: RVDHALRVSLPRSRG*GTKVCPEGARVQPG
Trigger: GCCGGGCTGCACGCGAGCGCCCTCCGGGCAGACTTTCGTCCCCCACCCCCGGGAGCGCGGAAGGCTCACTCGCAGCGCATGGTCTACCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS CCA 90 bp TGTGCCCAGGAAAGGTGGCGTGAAGTACCAGCCCAGCGGAAGAGCTaGCCTGGGGATCCAGTGGACTCCGACCTGGGGAAGGGCCATTTT +
Preference number: 5 (lower is better)
Translates to: CAQERWREVPAQRKS*PGDPVDSDLGKGHF
Trigger: AAAATGGCCCTTCCCCAGGTCGGAGTCCACTGGATCCCCAGGCCAGCTCTTCCGCTGGGCTGGTACTTCACGCCACCTTTCCTGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000412480.6
ENST00000423207.6
CDS GCA 90 bp TCACCGCTACCACCGCTGATTCCGGTGCTACTGAAGGTGCCCCCGTaGTCCTTCATTATTTGCACGCTGGCTCCTTCCTTCCAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SPLPPLIPVLLKVPP*SFIICTLAPSFQLS
Trigger: AGAGAGCTGGAAGGAAGGAGCCAGCGTGCAAATAATGAAGGAGCACGGGGGCACCTTCAGTAGCACCGGAATCAGCGGTGGTAGCGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR CAA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAACAATGCTTGGAAGCGTaGTCAAAGGCAGTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQQCLEA*SKAVWS
Trigger: CGACCACACTGCCTTTGACAACGCTTCCAAGCATTG...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CAA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAATTCAAGCCATGTGTCTaGATCAGAATCGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQFKPCV*IRIGPQ
Trigger: CTGGGGGCCGATTCTGATCAAGACACATGGCTTGAA...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAGAAAGGGCAGACCCTTaGAACAAAAGCCCACCCCTG +
Preference number: 5 (lower is better)
Translates to: NRPPATASALSTKLAIKAERADP*NKSPPL
Trigger: CAGGGGTGGGCTTTTGTTCAAAGGGTCTGCCCTTTC...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGTATCCACGGGGGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQVSTGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCCCCCGTGGATAC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCAAGGCCAGGTGGCCCTaGTCCTGTGCAGGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFKARWP*SCAGLG
Trigger: GCCAAGACCTGCACAGGACAAGGGCCACCTGGCCTT...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAATGTTAAGACCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGTCTTAACAT...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCCCCTCTCCCGCTCTTaGTCTCCCTGCTGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: CLDQNRPPATASALSTKLPLSRS*SPCWKN
Trigger: ATTTTTCCAGCAGGGAGACAAAGAGCGGGAGAGGGG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGAAAGGGCAGACCCTTaGAACAAAAGCCCACCCCTG +
Preference number: 5 (lower is better)
Translates to: CLDQNRPPATASALSTKLERADP*NKSPPL
Trigger: CAGGGGTGGGCTTTTGTTCAAAGGGTCTGCCCTTTC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCAAGTCATCGCCGTGTaGCTCGCTTGGAAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: CLDQNRPPATASALSTKLQVIAV*LAWKRR
Trigger: TCTTCTCTTCCAAGCGAGCAACACGGCGATGACTTG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAATGTTAAGACCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NRPPATASALSTKLAIKAMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGTCTTAACAT...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAAAGGCCAGGTGGCCCTaGTCCTGTGCAGGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: RQEATSSKSVVREHSEESKARWP*SCAGLG
Trigger: GCCAAGACCTGCACAGGACAAGGGCCACCTGGCCTT...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAATTTGCTTCCTGGTCTaGCTTTCTGACTCCAAACTC +
Preference number: 5 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQICFLV*LSDSKL
Trigger: GAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAAT...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS TCA 90 bp CTCCATCAGACCCTGGCAGTCCCTGTTCTGCTCGTCCAGTGGTGGTaGGGGACTTTGAGGTATCATGCTCTGATACCAGTTCCTGTTATC +
Preference number: 5 (lower is better)
Translates to: LHQTLAVPVLLVQWW*GTLRYHALIPVPVI
Trigger: GATAACAGGAACTGGTATCAGAGCATGATACCTCAAAGTCCCTCACCACCACTGGACGAGCAGAACAGGGACTGCCAGGGTCTGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGTACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAAGGCCAGGTGGCCCTaGTCCTGTGCAGGTCTTGGC +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRKARWP*SCAGLG
Trigger: GCCAAGACCTGCACAGGACAAGGGCCACCTGGCCTT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAACATGCCCACATAGATTaGGATAGAACCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQHAHID*DRTWVK
Trigger: TTTTACCCAGGTTCTATCCAAATCTATGTGGGCATG...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGTTCATAGACATACATaGGTCATGCACATTTGTGCC +
Preference number: 5 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQVHRHT*VMHICA
Trigger: GGCACAAATGTGCATGACCAATGTATGTCTATGAAC...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGCGCCGTGTTGCTCGCTaGGAAGAGAAGAGTTTCTCG +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGRRVAR*EEKSFS
Trigger: CGAGAAACTCTTCTCTTCCAAGCGAGCAACACGGCG...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTATGTTAAGACCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CLDQNRPPATASALSTKLMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGTCTTAACAT...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGTCACAGTGTTCTTCTaGCAGCAGTTTGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: CLDQNRPPATASALSTKLVTVFF*QQFETH
Trigger: GTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGAC...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACCCCTCTCCCGCTCTTaGTCTCCCTGCTGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGPLSRS*SPCWKN
Trigger: ATTTTTCCAGCAGGGAGACAAAGAGCGGGAGAGGGG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGAAAGGGCAGACCCTTaGAACAAAAGCCCACCCCTG +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGERADP*NKSPPL
Trigger: CAGGGGTGGGCTTTTGTTCAAAGGGTCTGCCCTTTC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGCAAGTCATCGCCGTGTaGCTCGCTTGGAAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGQVIAV*LAWKRR
Trigger: TCTTCTCTTCCAAGCGAGCAACACGGCGATGACTTG...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAACCTCCAGCGTTTCCATaGCTAATTTTTGATAAGATT +
Preference number: 5 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQPPAFP*LIFDKI
Trigger: AATCTTATCAAAAATTAGCAATGGAAACGCTGGAGG...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCTACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACCCTCTCCACCAAGCTaGCCATCAAGGCAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSPSPPS*PSRQVN
Trigger: GTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGATTCAAGCCATGTGTCTaGATCAGAATCGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGFKPCV*IRIGPQ
Trigger: CTGGGGGCCGATTCTGATCAAGACACATGGCTTGAA...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GGTCTTGGCCCCCATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAAATTTAACACCACCATaGGCAGGCAATGTTAGATAT +
Preference number: 5 (lower is better)
Translates to: GLGPHGGLALPHSWHAHQNLTPP*AGNVRY
Trigger: ATATCTAACATTGCCTGCCAATGGTGGTGTTAAATT...TTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCATGGGGGCCAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGTGGTTCATAAAGGGGTaGTGCAGAAGTAGCAACTCA +
Preference number: 5 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEWFIKG*CRSSNS
Trigger: TGAGTTGCTACTTCTGCACAACCCCTTTATGAACCA...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGTGCTCCTTCATTATTaGCACGCTGGCTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFVLLHY*HAGSFL
Trigger: AAGGAAGGAGCCAGCGTGCAAATAATGAAGGAGCAC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS-3UTR CAA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGAGTCACTTGTTTTGTTaGCACAAAGAGCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: SPLHQACHQGKSTVGFPESHLFC*HKEQTQ
Trigger: CTGGGTCTGCTCTTTGTGCAAACAAAACAAGTGACT...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGCTTCGCACTCCATTCTaGCAAGAAGCCTATGCTCCC +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGLRTPF*QEAYAP
Trigger: GGGAGCATAGGCTTCTTGCAAGAATGGAGTGCGAAG...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS TCA 90 bp TTCTCAGGTCCTTCAGAATCTTCCTCATCGAGAGTCAGTTCAAACTaGAACTTCTCCATCAGACCCTGGCAGTCCCTGTTCTGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: FSGPSESSSSRVSSN*NFSIRPWQSLFCSS
Trigger: GGACGAGCAGAACAGGGACTGCCAGGGTCTGATGGAGAAGTTTCAGTTTGAACTGACTCTCGATGAGGAAGATTCTGAAGGACCTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCACTCCCTCAGGAGTCCTaGCCCTTTCACTCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RQEATSSKSVVREHSEESLPQES*PFHSVF
Trigger: AAAGACAGAGTGAAAGGGCAAGGACTCCTGAGGGAG...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CAA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACTCCCTCAGGAGTCCTaGCCCTTTCACTCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSLPQES*PFHSVF
Trigger: AAAGACAGAGTGAAAGGGCAAGGACTCCTGAGGGAG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CAA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCGGTTCAGCATTCTTTaGAACTTGTTAGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: CLDQNRPPATASALSTKLRFSIL*NLLEAI
Trigger: GATGGCTTCTAACAAGTTCAAAAGAATGCTGAACCG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCGTGAGATGCTTGTATaGTTTAGGCTTGAACTATGC +
Preference number: 5 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEREMLV*FRLELC
Trigger: GCATAGTTCAAGCCTAAACAATACAAGCATCTCACG...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTCGTGAGATGCTTGTATaGTTTAGGCTTGAACTATGC +
Preference number: 5 (lower is better)
Translates to: CLDQNRPPATASALSTKLREMLV*FRLELC
Trigger: GCATAGTTCAAGCCTAAACAATACAAGCATCTCACG...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTTCTTCATTTTCAGTGTaGACTCCAAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: CLDQNRPPATASALSTKLSSFSV*TPKREM
Trigger: CATCTCACGCTTTGGAGTCAACACTGAAAATGAAGA...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGATGCGGTCTGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGDAVCP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACAGACCGCATC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGTATCCACGGGGGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGVSTGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCCCCCGTGGATAC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACCCTCTCCACCAAGCTaGCCATCAAGGCAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRPSPPS*PSRQVN
Trigger: GTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp AATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTGCCATCAAGGCAAATGATCTCTCAGTTTaGTGTCTTCCATTTTCAAGC +
Preference number: 5 (lower is better)
Translates to: NRPPATASALSTKLAIKANDLSV*CLPFSS
Trigger: GCTTGAAAATGGAAGACACAAAACTGAGAGATCATT...TGCCTTGATGGCAAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGTCTTGATCAGAATCGGCCCCCAGCAACAGCTTCAGCCCTCTCCACCAAGCTTAAGTTAAAAGTACTGTaGGAGGCAGGCAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: CLDQNRPPATASALSTKLKLKVL*EAGKQR
Trigger: TCTCTGTTTGCCTGCCTCCAACAGTACTTTTAACTT...AAGCTTGGTGGAGAGGGCTGAAGCTGTTGCTGGGGGCCGATTCTGATCAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGATTTGCCTCAGGCATTTaGGAATGCTCTCCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGFASGI*ECSPCH
Trigger: GTGGCAAGGAGAGCATTCCAAAATGCCTGAGGCAAA...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACAATGCTTGGAAGCGTaGTCAAAGGCAGTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRQCLEA*SKAVWS
Trigger: CGACCACACTGCCTTTGACAACGCTTCCAAGCATTG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGATGTTAAGACCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGTCTTAACAT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGTCACAGTGTTCTTCTaGCAGCAGTTTGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGVTVFF*QQFETH
Trigger: GTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGAC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAGATGCGGTCTGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSDAVCP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACAGACCGCATC...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGTATCCACGGGGGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: RQEATSSKSVVREHSEESVSTGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCCCCCGTGGATAC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATTTGCTTCCTGGTCTaGCTTTCTGACTCCAAACTC +
Preference number: 5 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFICFLV*LSDSKL
Trigger: GAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAAT...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATTCAAGCCATGTGTCTaGATCAGAATCGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRFKPCV*IRIGPQ
Trigger: CTGGGGGCCGATTCTGATCAAGACACATGGCTTGAA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTTTGGAATGCTCTCCTaGCCACAATCCACAAATCCC +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGFGMLS*PQSTNP
Trigger: GGGATTTGTGGATTGTGGCAAGGAGAGCATTCCAAA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS TCA 90 bp GGTGGCCGAAGGGGTTTCCACTCTTCTACATTAGTCCTACTCAGCTaGACTCTGCAAGGAAGAAGAAATTCTTCTTTCCTGAGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: GGRRGFHSSTLVLLS*TLQGRRNSSFLRSC
Trigger: GCAACTCCTCAGGAAAGAAGAATTTCTTCTTCCTTGCAGAGTTCAGCTGAGTAGGACTAATGTAGAAGAGTGGAAACCCCTTCGGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS GCA 90 bp CCCTGTTCTGCTCGTCCAGTGGTGGTGAGGGACTTTGAGGTATCATaGTCTGATACCAGTTCCTGTTATCTTCTAAGGTATCGAGAATGT +
Preference number: 5 (lower is better)
Translates to: PCSARPVVVRDFEVS*SDTSSCYLLRYREC
Trigger: ACATTCTCGATACCTTAGAAGATAACAGGAACTGGTATCAGAGCATGATACCTCAAAGTCCCTCACCACCACTGGACGAGCAGAACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS GCA 90 bp TGGCATTTCCTAAGCCAAACAAAGCCCATCTTCGCACTCCATTCTTaGAAGAAGCCTATGCTCCCTGCTTATTTCCTGGCAGAAGAGAGT +
Preference number: 5 (lower is better)
Translates to: WHFLSQTKPIFALHS*KKPMLPAYFLAEES
Trigger: ACTCTCTTCTGCCAGGAAATAAGCAGGGAGCATAGGCTTCTTGCAAGAATGGAGTGCGAAGATGGGCTTTGTTTGGCTTAGGAAATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS CCA 90 bp TTCCACATCAAAGCACTCCTGGCTTACAGTTGTAATAGCAATGCTTaGAAGCGTTGTCAAAGGCAGTGTGGTCGGCCTGGAAATACCATC +
Preference number: 5 (lower is better)
Translates to: FHIKALLAYSCNSNA*KRCQRQCGRPGNTI
Trigger: GATGGTATTTCCAGGCCGACCACACTGCCTTTGACAACGCTTCCAAGCATTGCTATTACAACTGTAAGCCAGGAGTGCTTTGATGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS-3UTR CAA 90 bp AGCCCTCTCCACCAAGCTTGCCATCAAGGCAAGTCAACCGTGGGATTTCCTGAGCCTCCAGCGTTTCCATaGCTAATTTTTGATAAGATT +
Preference number: 5 (lower is better)
Translates to: SPLHQACHQGKSTVGFPEPPAFP*LIFDKI
Trigger: AATCTTATCAAAAATTAGCAATGGAAACGCTGGAGG...CTCAGGAAATCCCACGGTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGCCCCTCTCCCGCTCTTaGTCTCCCTGCTGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMPLSRS*SPCWKN
Trigger: ATTTTTCCAGCAGGGAGACAAAGAGCGGGAGAGGGG...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGATTTGCTTCCTGGTCTaGCTTTCTGACTCCAAACTC +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGICFLV*LSDSKL
Trigger: GAGTTTGGAGTCAGAAAGCAAGACCAGGAAGCAAAT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCCATGCCCACATAGATTaGGATAGAACCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFHAHID*DRTWVK
Trigger: TTTTACCCAGGTTCTATCCAAATCTATGTGGGCATG...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCGTTCATAGACATACATaGGTCATGCACATTTGTGCC +
Preference number: 5 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFVHRHT*VMHICA
Trigger: GGCACAAATGTGCATGACCAATGTATGTCTATGAAC...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAGCATGGTGAGTTCCTaGGTGAACTGCGTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRSMVSS*VNCVEK
Trigger: TTTCTCCACGCAGTTCACCAAGGAACTCACCATGCT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS TCA 90 bp AAGAGCCTGTCCAAATGTATTCAGCTGGCTGGTTTGAAGCACTTATaGATTATGAATAGCCCTGGTGGCCGAAGGGGTTTCCACTCTTCT +
Preference number: 5 (lower is better)
Translates to: KSLSKCIQLAGLKHL*IMNSPGGRRGFHSS
Trigger: AGAAGAGTGGAAACCCCTTCGGCCACCAGGGCTATTCATAATTCATAAGTGCTTCAAACCAGCCAGCTGAATACATTTGGACAGGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS GCA 90 bp GCCAAACAAAGCCCATCTTCGCACTCCATTCTTGCAAGAAGCCTATaGTCCCTGCTTATTTCCTGGCAGAAGAGAGTAATGAAATCAGGA +
Preference number: 5 (lower is better)
Translates to: AKQSPSSHSILARSL*SLLISWQKRVMKSG
Trigger: TCCTGATTTCATTACTCTCTTCTGCCAGGAAATAAGCAGGGAGCATAGGCTTCTTGCAAGAATGGAGTGCGAAGATGGGCTTTGTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS CCA 90 bp AGAAGAATTTCAGTTCCAACAGAACTCCATGGTGTTCCTTCAAGGTaGCCCTTCCTCTCTGCAGCTCTCAACACACCAAGAAAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: RRISVPTELHGVPSR*PFLSAALNTPRKVD
Trigger: ATCCACTTTTCTTGGTGTGTTGAGAGCTGCAGAGAGGAAGGGCCACCTTGAAGGAACACCATGGAGTTCTGTTGGAACTGAAATTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371048.7
ENST00000490695.1
CDS CCA 90 bp GTTGCATTTTGTGTGAAGAAGAATTTCAGTTCCAACAGAACTCCATaGTGTTCCTTCAAGGTGGCCCTTCCTCTCTGCAGCTCTCAACAC +
Preference number: 5 (lower is better)
Translates to: VAFCVKKNFSSNRTP*CSFKVALPLCSSQH
Trigger: GTGTTGAGAGCTGCAGAGAGGAAGGGCCACCTTGAAGGAACACCATGGAGTTCTGTTGGAACTGAAATTCTTCTTCACACAAAATGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371048.7
ENST00000490695.1
CDS CCA 90 bp TCGCACTCCATTCTTGCAAGAAGCCTATGCTCCCTGCTTATTTCCTaGCAGAAGAGAGTAATGAAATCAGGAATTGCACGAAGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: SHSILARSLCSLLIS*QKRVMKSGIARRSK
Trigger: CTTGCTCCTTCGTGCAATTCCTGATTTCATTACTCTCTTCTGCCAGGAAATAAGCAGGGAGCATAGGCTTCTTGCAAGAATGGAGTGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGTCAGTATAGTGAAGTaGTTTCTCACACTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGVSIVK*FLTLRK
Trigger: CTTGCGAAGTGTGAGAAACAACTTCACTATACTGAC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAGTCAGTATAGTGAAGTaGTTTCTCACACTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGVSIVK*FLTLRK
Trigger: CTTGCGAAGTGTGAGAAACAACTTCACTATACTGAC...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGATTCTTCTTGTGGGTaGACTCTGGAGACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMDSSCG*TLETGG
Trigger: GCCTCCTGTCTCCAGAGTCAACCCACAAGAAGAATC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTCTTCATTTTCAGTGTaGACTCCAAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGSSFSV*TPKREM
Trigger: CATCTCACGCTTTGGAGTCAACACTGAAAATGAAGA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGTCACAGTGTTCTTCTaGCAGCAGTTTGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRVTVFF*QQFETH
Trigger: GTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGAC...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGTTCAAGCCATGTGTCTaGATCAGAATCGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMFKPCV*IRIGPQ
Trigger: CTGGGGGCCGATTCTGATCAAGACACATGGCTTGAA...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGAAGTTAAAAGTACTGTaGGAGGCAGGCAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGKLKVL*EAGKQR
Trigger: TCTCTGTTTGCCTGCCTCCAACAGTACTTTTAACTT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATGGTTCATAAAGGGGTaGTGCAGAAGTAGCAACTCA +
Preference number: 5 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSWFIKG*CRSSNS
Trigger: TGAGTTGCTACTTCTGCACAACCCCTTTATGAACCA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGAAGAGGCTTCACATTaGCGTAATTTGCTACATCAG +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGEEASH*RNLLHQ
Trigger: CTGATGTAGCAAATTACGCAAATGTGAAGCCTCTTC...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGTCATTTCTGAGTGCTTaGCCATCTCAAGGAGAAATG +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGSFLSA*PSQGEM
Trigger: CATTTCTCCTTGAGATGGCAAAGCACTCAGAAATGA...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS TCA 90 bp AATCTCTGTTTTCTGGATCAATCACACAAAGCGTCTTTGTGCTGCTaGAATAGCTGTGTCCCTCTCCCTCCTTCTCAGGTCCTTCAGAAT +
Preference number: 5 (lower is better)
Translates to: NLCFLDQSHKASLCC*NSCVPLPPSQVLQN
Trigger: ATTCTGAAGGACCTGAGAAGGAGGGAGAGGGACACAGCTATTTCAGCAGCACAAAGACGCTTTGTGTGATTGATCCAGAAAACAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCATTGATAAGATTCTTCTaGTGGGTTGACTCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSLIRFF*WVDSGD
Trigger: GTCTCCAGAGTCAACCCACAAGAAGAATCTTATCAA...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGAGCATTCTTTTGAACTaGTTAGAAGCCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: HIAGMLIKDRMFISTGRGSILLN*LEAISL
Trigger: CAGTGAGATGGCTTCTAACAAGTTCAAAAGAATGCT...CCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCACAAAGCGTGAGATGCTaGTATTGTTTAGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSQSVRC*YCLGLN
Trigger: GTTCAAGCCTAAACAATACAAGCATCTCACGCTTTG...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACACCCTCTCCACCAAGCTaGCCATCAAGGCAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTPSPPS*PSRQVN
Trigger: GTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGG...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGGTGGGCTGGCCCTACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCAATTTAACACCACCATaGGCAGGCAATGTTAGATAT +
Preference number: 5 (lower is better)
Translates to: MVGWPYHIAGMLIKDRMFNLTPP*AGNVRY
Trigger: ATATCTAACATTGCCTGCCAATGGTGGTGTTAAATT...GAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTAGGGCCAGCCCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATGGTTCATAAAGGGGTaGTGCAGAAGTAGCAACTCA +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRWFIKG*CRSSNS
Trigger: TGAGTTGCTACTTCTGCACAACCCCTTTATGAACCA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGTTCATAGACATACATaGGTCATGCACATTTGTGCC +
Preference number: 5 (lower is better)
Translates to: RQEATSSKSVVREHSEESVHRHT*VMHICA
Trigger: GGCACAAATGTGCATGACCAATGTATGTCTATGAAC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS CCA 90 bp TGTTGCAATGTCTATGTCAGTCTCTCCCAGGGAATCTCTGTTTTCTaGATCAATCACACAAAGCGTCTTTGTGCTGCTGAAATAGCTGTG +
Preference number: 5 (lower is better)
Translates to: CCNVYVSLSQGISVF*INHTKRLCAAEIAV
Trigger: CACAGCTATTTCAGCAGCACAAAGACGCTTTGTGTGATTGATCCAGAAAACAGAGATTCCCTGGGAGAGACTGACATAGACATTGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATTGATAAGATTCTTCTaGTGGGTTGACTCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRLIRFF*WVDSGD
Trigger: GTCTCCAGAGTCAACCCACAAGAAGAATCTTATCAA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGACCTCCAGCGTTTCCATaGCTAATTTTTGATAAGATT +
Preference number: 5 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGPPAFP*LIFDKI
Trigger: AATCTTATCAAAAATTAGCAATGGAAACGCTGGAGG...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TGGAACATGACATTCCTGCTTAATGGCAGGCAGGAGGCTACCTCTTCAAAGTCAAGCATTCTTTTGAACTaGTTAGAAGCCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: WNMTFLLNGRQEATSSKSSILLN*LEAISL
Trigger: CAGTGAGATGGCTTCTAACAAGTTCAAAAGAATGCT...TGACTTTGAAGAGGTAGCCTCCTGCCTGCCATTAAGCAGGAATGTCATGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACGGTTCAGCATTCTTTaGAACTTGTTAGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRRFSIL*NLLEAI
Trigger: GATGGCTTCTAACAAGTTCAAAAGAATGCTGAACCG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACGTGAGATGCTTGTATaGTTTAGGCTTGAACTATGC +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRREMLV*FRLELC
Trigger: GCATAGTTCAAGCCTAAACAATACAAGCATCTCACG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACAAAGCGTGAGATGCTaGTATTGTTTAGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRQSVRC*YCLGLN
Trigger: GTTCAAGCCTAAACAATACAAGCATCTCACGCTTTG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGATCTTCATTTTCAGTGTaGACTCCAAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRSSFSV*TPKREM
Trigger: CATCTCACGCTTTGGAGTCAACACTGAAAATGAAGA...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS-3UTR CAA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGCCCTCTCCACCAAGCTaGCCATCAAGGCAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVPSPPS*PSRQVN
Trigger: GTTGACTTGCCTTGATGGCAAGCTTGGTGGAGAGGG...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAGGGGGAAATGATCTCTCAGTTTaGTGTCTTCCATTTTCAAGC +
Preference number: 5 (lower is better)
Translates to: IAGMLIKDRMFISTGRGGNDLSV*CLPFSS
Trigger: GCTTGAAAATGGAAGACACAAAACTGAGAGATCATT...TCCCCCTCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAAGTTAAAAGTACTGTaGGAGGCAGGCAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRKLKVL*EAGKQR
Trigger: TCTCTGTTTGCCTGCCTCCAACAGTACTTTTAACTT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp AGGCAGGAGGCTACCTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCAGCAAAACCTAGTCACTaGTTTTGTTTGCACAAAGAG +
Preference number: 5 (lower is better)
Translates to: RQEATSSKSVVREHSEESAKPSH*FCLHKE
Trigger: CTCTTTGTGCAAACAAAACAAGTGACTAGGTTTTGC...TGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAGGTAGCCTCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR CAA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGATTCTTCTTGTGGGTaGACTCTGGAGACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVDSSCG*TLETGG
Trigger: GCCTCCTGTCTCCAGAGTCAACCCACAAGAAGAATC...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAGCATTCTTTTGAACTaGTTAGAAGCCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRSILLN*LEAISL
Trigger: CAGTGAGATGGCTTCTAACAAGTTCAAAAGAATGCT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACATACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGATGCGGTCTGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTDAVCP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACAGACCGCATC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCCCCTCTCCCGCTCTTaGTCTCCCTGCTGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKPLSRS*SPCWKN
Trigger: ATTTTTCCAGCAGGGAGACAAAGAGCGGGAGAGGGG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGTATCCACGGGGGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTVSTGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCCCCCGTGGATAC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGACCTTTGAAGAATCTTTaGCTGTCATGTCTTGTAAGG +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRPLKNL*LSCLVR
Trigger: CCTTACAAGACATGACAGCAAAAGATTCTTCAAAGG...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCAAGTCATCGCCGTGTaGCTCGCTTGGAAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKQVIAV*LAWKRR
Trigger: TCTTCTCTTCCAAGCGAGCAACACGGCGATGACTTG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGATTCTTCTTGTGGGTaGACTCTGGAGACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKDSSCG*TLETGG
Trigger: GCCTCCTGTCTCCAGAGTCAACCCACAAGAAGAATC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGTCTTCATTTTCAGTGTaGACTCCAAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMSSFSV*TPKREM
Trigger: CATCTCACGCTTTGGAGTCAACACTGAAAATGAAGA...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGTCACAGTGTTCTTCTaGCAGCAGTTTGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTVTVFF*QQFETH
Trigger: GTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGAC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGTATCCACGGGGGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVVSTGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCCCCCGTGGATAC...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAATTTAACACCACCATaGGCAGGCAATGTTAGATAT +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRNLTPP*AGNVRY
Trigger: ATATCTAACATTGCCTGCCAATGGTGGTGTTAAATT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGCATGCCCACATAGATTaGGATAGAACCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMHAHID*DRTWVK
Trigger: TTTTACCCAGGTTCTATCCAAATCTATGTGGGCATG...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp CTCTTCAAAGTCAGTAGTTCGGGAGCATTCAGAAGAATCATCTGTGAGCAAATGGAAGAGGCTTCACATTaGCGTAATTTGCTACATCAG +
Preference number: 5 (lower is better)
Translates to: LFKVSSSGAFRRIICEQMEEASH*RNLLHQ
Trigger: CTGATGTAGCAAATTACGCAAATGTGAAGCCTCTTC...CATTTGCTCACAGATGATTCTTCTGAATGCTCCCGAACTACTGACTTTGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TACCACATAGCTGGCATGCTCATCAAGGATAGAATGTTCATCTCCACAGGGAGAAATCCACAAATCCCTTaGAAAGAATTCACAGTTCTG +
Preference number: 5 (lower is better)
Translates to: YHIAGMLIKDRMFISTGRNPQIP*KEFTVL
Trigger: CAGAACTGTGAATTCTTTCAAAGGGATTTGTGGATT...TCTCCCTGTGGAGATGAACATTCTATCCTTGATGAGCATGCCAGCTATGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS GCA 90 bp GATGTAGGTCTGTTTCCTGGTAATCTCGGAAGCTCAAGTTCTAAATaGATTTGCTCCTTGAAAGTCTTTATGCAAACCTCAGGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: DVGLFPGNLGSSSSK*ICSLKVFMQTSGSE
Trigger: TTCTGAACCTGAGGTTTGCATAAAGACTTTCAAGGAGCAAATGCATTTAGAACTTGAGCTTCCGAGATTACCAGGAAACAGACCTACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000423207.6
ENST00000526666.1
ENST00000531358.1
ENST00000532040.1
CDS-3UTR CAA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGGTCACAGTGTTCTTCTaGCAGCAGTTTGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVVTVFF*QQFETH
Trigger: GTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGAC...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGGATGCGGTCTGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKDAVCP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACAGACCGCATC...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACAGTCAGTATAGTGAAGTaGTTTCTCACACTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTVSIVK*FLTLRK
Trigger: CTTGCGAAGTGTGAGAAACAACTTCACTATACTGAC...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACATTGATAAGATTCTTCTaGTGGGTTGACTCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTLIRFF*WVDSGD
Trigger: GTCTCCAGAGTCAACCCACAAGAAGAATCTTATCAA...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000423207.6
CDS-3UTR CAA 90 bp TATAACCCAACTCATGCCCACATAGATTTGGATAGAACCTGGGTAAAAACTACACGGTTCAGCATTCTTTaGAACTTGTTAGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: YNPTHAHIDLDRTWVKTTRFSIL*NLLEAI
Trigger: GATGGCTTCTAACAAGTTCAAAAGAATGCTGAACCG...TGTAGTTTTTACCCAGGTTCTATCCAAATCTATGTGGGCATGAGTTGGGTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGCGGTTCAGCATTCTTTaGAACTTGTTAGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVRFSIL*NLLEAI
Trigger: GATGGCTTCTAACAAGTTCAAAAGAATGCTGAACCG...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGCAAAGCGTGAGATGCTaGTATTGTTTAGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVQSVRC*YCLGLN
Trigger: GTTCAAGCCTAAACAATACAAGCATCTCACGCTTTG...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGTCTTCATTTTCAGTGTaGACTCCAAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVSSFSV*TPKREM
Trigger: CATCTCACGCTTTGGAGTCAACACTGAAAATGAAGA...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp GTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGTGAGCATTCTTTTGAACTaGTTAGAAGCCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: VVRSVSFLSVCKSNCSKVSILLN*LEAISL
Trigger: CAGTGAGATGGCTTCTAACAAGTTCAAAAGAATGCT...CACTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCGTGAGATGCTTGTATaGTTTAGGCTTGAACTATGC +
Preference number: 5 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKREMLV*FRLELC
Trigger: GCATAGTTCAAGCCTAAACAATACAAGCATCTCACG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS-3UTR CAA 90 bp ATGTGGTTAGAAGTGTATCCTTTCTGTCTGTTTGCAAAAGTAACTGTAGTAAAGCAAAGCGTGAGATGCTaGTATTGTTTAGGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: MWLEVYPFCLFAKVTVVKQSVRC*YCLGLN
Trigger: GTTCAAGCCTAAACAATACAAGCATCTCACGCTTTG...CTTTACTACAGTTACTTTTGCAAACAGACAGAAAGGATACACTTCTAACCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
CDS GCA 72 bp AGCCTTCCGCGCTCCCGGGGGTGGGGGACGAAAGTCTaGCCGGAGGGCGCTCGCGTGCAGCCCGGCCCGCGA +
Preference number: 6 (lower is better)
Translates to: SLPRSRGWGTKV*PEGARVQPGPR
Trigger: TCGCGGGCCGGGCTGCACGCGAGCGCCCTCCGGGCAGACTTTCGTCCCCCACCCCCGGGAGCGCGGAAGGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS GCA 72 bp CTGGACGCCGGGGCTCCGCCCGGCGCGGGTAGACCATaGGCTGCGAGTGAGCCTTCCGCGCTCCCGGGGGTG +
Preference number: 6 (lower is better)
Translates to: LDAGAPPGAGRP*AASEPSALPGV
Trigger: CACCCCCGGGAGCGCGGAAGGCTCACTCGCAGCGCATGGTCTACCCGCGCCGGGCGGAGCCCCGGCGTCCAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS GCA 72 bp TCGCAGAAGCCGCCCTCCTCCTGCCCGAGGCGCCTCTaGTGCACCGCCGCGGCCGCAGCGCTCTGGACGCCG +
Preference number: 6 (lower is better)
Translates to: SQKPPSSCPRRL*CTAAAAALWTP
Trigger: CGGCGTCCAGAGCGCTGCGGCCGCGGCGGTGCAGCAGAGGCGCCTCGGGCAGGAGGAGGGCGGCTTCTGCGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS GCA 72 bp GGTGGGGGACGAAAGTCTGCCCGGAGGGCGCTCGCGTaGAGCCCGGCCCGCGACGAAGAGCCTGCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: GGGRKSARRALA*SPARDEEPAAA
Trigger: AGCGGCTGCAGGCTCTTCGTCGCGGGCCGGGCTGCACGCGAGCGCCCTCCGGGCAGACTTTCGTCCCCCACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS CCA 72 bp GAAAGGTGGCGTGAAGTACCAGCCCAGCGGAAGAGCTaGCCTGGGGATCCAGTGGACTCCGACCTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: ERWREVPAQRKS*PGDPVDSDLGK
Trigger: CTTCCCCAGGTCGGAGTCCACTGGATCCCCAGGCCAGCTCTTCCGCTGGGCTGGTACTTCACGCCACCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000412480.6
ENST00000423207.6
ENST00000532040.1
CDS CAA 90 bp CACAGACCTCCTGCAATATTCCGCGGGCACGGTACCAGGGGAGTTTaGCAAAATAACCCTCTCTCCCAGCCGGGAGCTCACTGCATCTCC +
Preference number: 6 (lower is better)
Translates to: HRPPAIFRGHGTRGV*QNNPLSQPGAHCIS
Trigger: GGAGATGCAGTGAGCTCCCGGCTGGGAGAGAGGGTTATTTTGCAAAACTCCCCTGGTACCGTGCCCGCGGAATATTGCAGGAGGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329654.8
CDS GCA 72 bp CCACCGCTGATTCCGGTGCTACTGAAGGTGCCCCCGTaGTCCTTCATTATTTGCACGCTGGCTCCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: PPLIPVLLKVPP*SFIICTLAPSF
Trigger: GAAGGAAGGAGCCAGCGTGCAAATAATGAAGGAGCACGGGGGCACCTTCAGTAGCACCGGAATCAGCGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371045.9
CDS CAA 72 bp CCTGCAATATTCCGCGGGCACGGTACCAGGGGAGTTTaGCAAAATAACCCTCTCTCCCAGCCGGGAGCTCAC +
Preference number: 6 (lower is better)
Translates to: PAIFRGHGTRGV*QNNPLSQPGAH
Trigger: GTGAGCTCCCGGCTGGGAGAGAGGGTTATTTTGCAAAACTCCCCTGGTACCGTGCCCGCGGAATATTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329654.8
CDS TCA 72 bp GGCCTACCTTGTGGGTTGACTCTGGAGACAGGAGGCTaGCTAGCAGCTGGGGACCTCTTGTTAGATGTACCA +
Preference number: 6 (lower is better)
Translates to: GLPCGLTLETGG*LAAGDLLLDVP
Trigger: TGGTACATCTAACAAGAGGTCCCCAGCTGCTAGTCAGCCTCCTGTCTCCAGAGTCAACCCACAAGGTAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491340.2
CDS TCA 72 bp CACTGTCCTTGTGGGTTGACTCTGGAGACAGGAGGCTaGCTAGCAGCTGGGGACCTCTTGTTAGATGTACCA +
Preference number: 6 (lower is better)
Translates to: HCPCGLTLETGG*LAAGDLLLDVP
Trigger: TGGTACATCTAACAAGAGGTCCCCAGCTGCTAGTCAGCCTCCTGTCTCCAGAGTCAACCCACAAGGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371048.7
ENST00000490695.1
CDS CCA 72 bp TGCTTGGAAGCGTTGTCAAAGGCAGTGTGGTCGGCCTaGAAATACCATCTCCCTCAGGAGTCCTTGCCCTTT +
Preference number: 6 (lower is better)
Translates to: CLEALSKAVWSA*KYHLPQESLPF
Trigger: AAAGGGCAAGGACTCCTGAGGGAGATGGTATTTCCAGGCCGACCACACTGCCTTTGACAACGCTTCCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS CAA 72 bp TGGTCGGCCTGGAAATACCATCTCCCTCAGGAGTCCTaGCCCTTTCACTCTGTCTTTGAGACAGTGGTGGTA +
Preference number: 6 (lower is better)
Translates to: WSAWKYHLPQES*PFHSVFETVVV
Trigger: TACCACCACTGTCTCAAAGACAGAGTGAAAGGGCAAGGACTCCTGAGGGAGATGGTATTTCCAGGCCGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS CAA 72 bp CCACAGGGAGAGGGGGATTATGTATCCACGGGGGACTaGTCTTCTGTTGCAATGTCTATGTCAGTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: PQGEGDYVSTGD*SSVAMSMSVSP
Trigger: GGGAGAGACTGACATAGACATTGCAACAGAAGACAAGTCCCCCGTGGATACATAATCCCCCTCTCCCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS CAA 90 bp AAGGCAGTGTGGTCGGCCTGGAAATACCATCTCCCTCAGGAGTCCTaGCCCTTTCACTCTGTCTTTGAGACAGTGGTGGTAACTGTAAGT +
Preference number: 6 (lower is better)
Translates to: KAVWSAWKYHLPQES*PFHSVFETVVVTVS
Trigger: ACTTACAGTTACCACCACTGTCTCAAAGACAGAGTGAAAGGGCAAGGACTCCTGAGGGAGATGGTATTTCCAGGCCGACCACACTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS TCA 72 bp GATTCTTCTTGTGGGTTGACTCTGGAGACAGGAGGCTaGCTAGCAGCTGGGGACCTCTTGTTAGATGTACCA +
Preference number: 6 (lower is better)
Translates to: DSSCGLTLETGG*LAAGDLLLDVP
Trigger: TGGTACATCTAACAAGAGGTCCCCAGCTGCTAGTCAGCCTCCTGTCTCCAGAGTCAACCCACAAGAAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000412480.6
ENST00000423207.6
CDS TCA 72 bp CTTCTTGTGTGTCCTCTGACCATGTATGAGCCACAGTaGAGCGACGACGCTGCCGAATGCTTTTATTCACCA +
Preference number: 6 (lower is better)
Translates to: LLVCPLTMYEPQ*SDDAAECFYSP
Trigger: TGGTGAATAAAAGCATTCGGCAGCGTCGTCGCTTCACTGTGGCTCATACATGGTCAGAGGACACACAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526666.1
CDS GCA 72 bp GGGGGATTATGTATCCACGGGGGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTCTCCCAGGGAATCTCT +
Preference number: 6 (lower is better)
Translates to: GGLCIHGGLVFC*NVYVSLSQGIS
Trigger: AGAGATTCCCTGGGAGAGACTGACATAGACATTGCAACAGAAGACAAGTCCCCCGTGGATACATAATCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS CCA 72 bp AAAGCACTCCTGGCTTACAGTTGTAATAGCAATGCTTaGAAGCGTTGTCAAAGGCAGTGTGGTCGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: KALLAYSCNSNA*KRCQRQCGRPG
Trigger: TCCAGGCCGACCACACTGCCTTTGACAACGCTTCCAAGCATTGCTATTACAACTGTAAGCCAGGAGTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS CCA 72 bp TGCGCCAAAGTGCTTCCAATGTCAGTAGCCTCCTTGTaGATGAGGTTTGTCTGCAAGCTACACACTGACACT +
Preference number: 6 (lower is better)
Translates to: CAKVLPMSVASL*MRFVCKLHTDT
Trigger: AGTGTCAGTGTGTAGCTTGCAGACAAACCTCATCCACAAGGAGGCTACTGACATTGGAAGCACTTTGGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS CAA 72 bp AGGGGGATTATGTATCCACGGGGGACTTGTCTTCTGTaGCAATGTCTATGTCAGTCTCTCCCAGGGAATCTC +
Preference number: 6 (lower is better)
Translates to: RGIMYPRGTCLL*QCLCQSLPGNL
Trigger: GAGATTCCCTGGGAGAGACTGACATAGACATTGCAACAGAAGACAAGTCCCCCGTGGATACATAATCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS CAA 72 bp AGTCAGGCTGTCACAAGGAGCTTTATCAGGCTGGCTTaGCCTCTGAAAATGCGCCAAAGTGCTTCCAATGTC +
Preference number: 6 (lower is better)
Translates to: SQAVTRSFIRLA*PLKMRQSASNV
Trigger: GACATTGGAAGCACTTTGGCGCATTTTCAGAGGCAAAGCCAGCCTGATAAAGCTCCTTGTGACAGCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423207.6
ENST00000531358.1
CDS CAA 72 bp CCTAAGCCAAACAAAGCCCATCTTCGCACTCCATTCTaGCAAGAAGCCTATGCTCCCTGCTTATTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: PKPNKAHLRTPF*QEAYAPCLFPG
Trigger: GCCAGGAAATAAGCAGGGAGCATAGGCTTCTTGCAAGAATGGAGTGCGAAGATGGGCTTTGTTTGGCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS CAA 90 bp AGAATAGCAAGTCAGGCTGTCACAAGGAGCTTTATCAGGCTGGCTTaGCCTCTGAAAATGCGCCAAAGTGCTTCCAATGTCAGTAGCCTC +
Preference number: 6 (lower is better)
Translates to: RIASQAVTRSFIRLA*PLKMRQSASNVSSL
Trigger: GAGGCTACTGACATTGGAAGCACTTTGGCGCATTTTCAGAGGCAAAGCCAGCCTGATAAAGCTCCTTGTGACAGCCTGACTTGCTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423207.6
ENST00000531358.1
CDS TCA 72 bp TCTCCCTCAGGAGTCCTTGCCCTTTCACTCTGTCTTTaGGACAGTGGTGGTAACTGTAAGTTTCCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: SPSGVLALSLCL*DSGGNCKFPEQ
Trigger: TTGCTCAGGAAACTTACAGTTACCACCACTGTCTCAAAGACAGAGTGAAAGGGCAAGGACTCCTGAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329654.8
ENST00000341517.9
CDS TCA 72 bp CCTTCAGAATCTTCCTCATCGAGAGTCAGTTCAAACTaGAACTTCTCCATCAGACCCTGGCAGTCCCTGTTC +
Preference number: 6 (lower is better)
Translates to: PSESSSSRVSSN*NFSIRPWQSLF
Trigger: GAACAGGGACTGCCAGGGTCTGATGGAGAAGTTTCAGTTTGAACTGACTCTCGATGAGGAAGATTCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS TCA 72 bp TTTCTGGATCAATCACACAAAGCGTCTTTGTGCTGCTaGAATAGCTGTGTCCCTCTCCCTCCTTCTCAGGTC +
Preference number: 6 (lower is better)
Translates to: FLDQSHKASLCC*NSCVPLPPSQV
Trigger: GACCTGAGAAGGAGGGAGAGGGACACAGCTATTTCAGCAGCACAAAGACGCTTTGTGTGATTGATCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS TCA 72 bp GGCCATTTTCCACATCAAAGCATGTATGAGCCACAGTaGAGCGACGACGCTGCCGAATGCTTTTATTCACCA +
Preference number: 6 (lower is better)
Translates to: GHFPHQSMYEPQ*SDDAAECFYSP
Trigger: TGGTGAATAAAAGCATTCGGCAGCGTCGTCGCTTCACTGTGGCTCATACATGCTTTGATGTGGAAAATGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423207.6
CDS GCA 72 bp AGCCCATCTTCGCACTCCATTCTTGCAAGAAGCCTATaGTCCCTGCTTATTTCCTGGCAGAAGAGAGTAATG +
Preference number: 6 (lower is better)
Translates to: SPSSHSILARSL*SLLISWQKRVM
Trigger: CATTACTCTCTTCTGCCAGGAAATAAGCAGGGAGCATAGGCTTCTTGCAAGAATGGAGTGCGAAGATGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS CAA 90 bp ATGGCATTTCCTAAGCCAAACAAAGCCCATCTTCGCACTCCATTCTaGCAAGAAGCCTATGCTCCCTGCTTATTTCCTGGCAGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: MAFPKPNKAHLRTPF*QEAYAPCLFPGRRE
Trigger: CTCTCTTCTGCCAGGAAATAAGCAGGGAGCATAGGCTTCTTGCAAGAATGGAGTGCGAAGATGGGCTTTGTTTGGCTTAGGAAATGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS TCA 72 bp CCAGCTCCTTGGCCAGGTGATCTTCATTTTCAGTGTTaGCTCCAAAGCGTGAGATGCTTGTATTGTTTAGGC +
Preference number: 6 (lower is better)
Translates to: PAPWPGDLHFQC*LQSVRCLYCLG
Trigger: GCCTAAACAATACAAGCATCTCACGCTTTGGAGTCAACACTGAAAATGAAGATCACCTGGCCAAGGAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
ENST00000524999.1
ENST00000526197.5
ENST00000528771.5
ENST00000531025.5
ENST00000534463.5
CDS TCA 72 bp GACATGAAGCCATTGGTAAACATGTATGAGCCACAGTaGAGCGACGACGCTGCCGAATGCTTTTATTCACCA +
Preference number: 6 (lower is better)
Translates to: DMKPLVNMYEPQ*SDDAAECFYSP
Trigger: TGGTGAATAAAAGCATTCGGCAGCGTCGTCGCTTCACTGTGGCTCATACATGTTTACCAATGGCTTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531358.1
CDS GCA 72 bp GCTCGTCCAGTGGTGGTGAGGGACTTTGAGGTATCATaGTCTGATACCAGTTCCTGTTATCTTCTAAGGTAT +
Preference number: 6 (lower is better)
Translates to: ARPVVVRDFEVS*SDTSSCYLLRY
Trigger: ATACCTTAGAAGATAACAGGAACTGGTATCAGAGCATGATACCTCAAAGTCCCTCACCACCACTGGACGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
CDS TCA 72 bp CCCCTCTTAGGATGTCTGTTATTCAATGCAGTTTGCTaGCACTTTTTAATACCTCAGGCTGCCCTCGCAGAA +
Preference number: 6 (lower is better)
Translates to: PLLGCLLFNAVC*HFLIPQAALAE
Trigger: TTCTGCGAGGGCAGCCTGAGGTATTAAAAAGTGTCAGCAAACTGCATTGAATAACAGACATCCTAAGAGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS CCA 72 bp CCACCAGCTACATGTCATTTCCTCTTAGAGAAGCAGTaGCCCTCTACAAACAGAAGTCATCAGTTTCTAAGC +
Preference number: 6 (lower is better)
Translates to: PPATCHFLLEKQ*PSTNRSHQFLS
Trigger: GCTTAGAAACTGATGACTTCTGTTTGTAGAGGGCCACTGCTTCTCTAAGAGGAAATGACATGTAGCTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483863.2
CDS CAA 90 bp ACGCTGCTTCTTGGTGAGATTCATGAAGATGTCACAGTGTTCTTCTaGCAGCAGTTTGAAACCCACAGCAAGGTGATGATTTTCCAACAC +
Preference number: 6 (lower is better)
Translates to: TLLLGEIHEDVTVFF*QQFETHSKVMIFQH
Trigger: GTGTTGGAAAATCATCACCTTGCTGTGGGTTTCAAACTGCTGCAAGAAGAACACTGTGACATCTTCATGAATCTCACCAAGAAGCAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
ENST00000483863.2
CDS CCA 72 bp ATCGCCGTGTCTGGATATAAGACAGGACTCACAATTTaGCACGAAAGGGTATTCCAAGAGCTTGAAAGGAAA +
Preference number: 6 (lower is better)
Translates to: IAVSGYKTGLTI*HERVFQELERK
Trigger: TTTCCTTTCAAGCTCTTGGAATACCCTTTCGTGCCAAATTGTGAGTCCTGTCTTATATCCAGACACGGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490695.1
CDS CAA 72 bp ATATCCCCTCTTAGGATGTCTGTTATTCAATGCAGTTaGCTGACACTTTTTAATACCTCAGGCTGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: ISPLRMSVIQCS*LTLFNTSGCPR
Trigger: GCGAGGGCAGCCTGAGGTATTAAAAAGTGTCAGCAAACTGCATTGAATAACAGACATCCTAAGAGGGGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341517.9
CDS CAA 90 bp TCAGGCCACAGGGATGCTGGTGGGTGCACAGAGGCAATTATTAAATaGCATAAAAACTACTTTATTGAACTAAATGACACCCTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: SGHRDAGGCTEAIIK*HKNYFIELNDTLWL
Trigger: CAGCCACAGGGTGTCATTTAGTTCAATAAAGTAGTTTTTATGCAATTTAATAATTGCCTCTGTGCACCCACCAGCATCCCTGTGGCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524999.1
CDS GCA 72 bp GCATTAACTCTTTCAGGCCACAGGGATGCTGGTGGGTaGACAGAGGCAATTATTAAATTGCATAAAAACTAC +
Preference number: 6 (lower is better)
Translates to: ALTLSGHRDAGG*TEAIIKLHKNY
Trigger: GTAGTTTTTATGCAATTTAATAATTGCCTCTGTGCACCCACCAGCATCCCTGTGGCCTGAAAGAGTTAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524999.1
CDS CCA 72 bp TTGTCTAAGAAAGTATTTGAAATGTATTCAGACACCTaGTTCCCTGATCGGCTCATCTCTGAGAGGTGTGTC +
Preference number: 6 (lower is better)
Translates to: LSKKVFEMYSDT*FPDRLISERCV
Trigger: GACACACCTCTCAGAGATGAGCCGATCAGGGAACCAGGTGTCTGAATACATTTCAAATACTTTCTTAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000329654.8
ENST00000341517.9
ENST00000371045.9
ENST00000423207.6
ENST00000480109.2
ENST00000526197.5
ENST00000528771.5
ENST00000531025.5
ENST00000534463.5
CDS CCA 72 bp ATTCTTGCAAGAAGCCTATGCTCCCTGCTTATTTCCTaGCAGAAGAGAGTAATGAAATCAGGAATTGCACGA +
Preference number: 6 (lower is better)
Translates to: ILARSLCSLLIS*QKRVMKSGIAR
Trigger: TCGTGCAATTCCTGATTTCATTACTCTCTTCTGCCAGGAAATAAGCAGGGAGCATAGGCTTCTTGCAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS CAA 90 bp CATTTACCTCCGCTGGTTACAGTGAAAATTAGTAGGAAGACAACTTaGCCATTTGAAAATGACATGCTCCCAGATGGCATTCTGGGATCT +
Preference number: 6 (lower is better)
Translates to: HLPPLVTVKISRKTT*PFENDMLPDGILGS
Trigger: AGATCCCAGAATGCCATCTGGGAGCATGTCATTTTCAAATGGCAAAGTTGTCTTCCTACTAATTTTCACTGTAACCAGCGGAGGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524999.1
CDS TCA 72 bp CCCCTCTTAGGATGTCTGTTATTCAATGCAGTTTGCTaGCACTTTTTAATACCTCACAGACCTCCTGCAATA +
Preference number: 6 (lower is better)
Translates to: PLLGCLLFNAVC*HFLIPHRPPAI
Trigger: TATTGCAGGAGGTCTGTGAGGTATTAAAAAGTGTCAGCAAACTGCATTGAATAACAGACATCCTAAGAGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329654.8
CDS GCA 72 bp TTAGTAGGAAGACAACTTTGCCATTTGAAAATGACATaGTCCCAGATGGCATTCTGGGATCTAGACGATTTG +
Preference number: 6 (lower is better)
Translates to: LVGRQLCHLKMT*SQMAFWDLDDL
Trigger: CAAATCGTCTAGATCCCAGAATGCCATCTGGGAGCATGTCATTTTCAAATGGCAAAGTTGTCTTCCTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524999.1
CDS CAA 72 bp ATATCCCCTCTTAGGATGTCTGTTATTCAATGCAGTTaGCTGACACTTTTTAATACCTCACAGACCTCCTGC +
Preference number: 6 (lower is better)
Translates to: ISPLRMSVIQCS*LTLFNTSQTSC
Trigger: GCAGGAGGTCTGTGAGGTATTAAAAAGTGTCAGCAAACTGCATTGAATAACAGACATCCTAAGAGGGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329654.8
CDS CAA 72 bp CCGCTGGTTACAGTGAAAATTAGTAGGAAGACAACTTaGCCATTTGAAAATGACATGCTCCCAGATGGCATT +
Preference number: 6 (lower is better)
Translates to: PLVTVKISRKTT*PFENDMLPDGI
Trigger: AATGCCATCTGGGAGCATGTCATTTTCAAATGGCAAAGTTGTCTTCCTACTAATTTTCACTGTAACCAGCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524999.1
CDS TCA 72 bp CATCAAAGCACTCAGAAAAAGGACTCTTCTGGAACATaGGGATCCATACTAATAAGCATGTTCTTCACTGCA +
Preference number: 6 (lower is better)
Translates to: HQSTQKKDSSGT*GSILISMFFTA
Trigger: TGCAGTGAAGAACATGCTTATTAGTATGGATCCTCATGTTCCAGAAGAGTCCTTTTTCTGAGTGCTTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532040.1
CDS CAA 72 bp CAAATAATTTGCCTCAGGCATTTTGGAATGCTCTCCTaGCCACAATCCACAAATCCCTTTGAAAGAATTCAC +
Preference number: 6 (lower is better)
Translates to: QIICLRHFGMLS*PQSTNPFERIH
Trigger: GTGAATTCTTTCAAAGGGATTTGTGGATTGTGGCAAGGAGAGCATTCCAAAATGCCTGAGGCAAATTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480109.2
CDS TCA 72 bp TTCAAAAGTACCTACATTTACCTCCGCTGGTTACAGTaGAAATTAGTAGGAAGACAACTTTGCCATTTGAAA +
Preference number: 6 (lower is better)
Translates to: FKSTYIYLRWLQ*KLVGRQLCHLK
Trigger: TTTCAAATGGCAAAGTTGTCTTCCTACTAATTTTCACTGTAACCAGCGGAGGTAAATGTAGGTACTTTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524999.1
CDS CAA 72 bp TTGGACTTTAACAAATATCATAGAACTGGTTGCATTTaGTGTGAAGAAGAATTTCAGTTCCAACAGAACTCC +
Preference number: 6 (lower is better)
Translates to: LDFNKYHRTGCI*CEEEFQFQQNS
Trigger: GGAGTTCTGTTGGAACTGAAATTCTTCTTCACACAAAATGCAACCAGTTCTATGATATTTGTTAAAGTCCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371048.7
ENST00000490695.1