RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE3B (Homo sapiens)

Ensembl gene IDs: ENSG00000152270

Ensembl transcript IDs: ENST00000282096.9, ENST00000455098.2, ENST00000525439.1, ENST00000532740.1, ENST00000534317.1

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCAGCCGGTaGACACTAGGCAATGATTTCTGCCCCTGGGCACAACCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: IKACPHGNGQLRVSR*TLGNDFCPWAQPSG
Trigger: CCCAGAGGGTTGTGCCCAGGGGCAGAAATCATTGCCTAGTGTTCACCGGCTGACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
3UTR TCA 90 bp CCCCCAGTGAAAAATAAGAGCTCACTACCCAGCAAAGCAGCATTATaGCAAAGTATTCATACACCAGTGAAGGATTTAAGTAAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: PPVKNKSSLPSKAAL*QSIHTPVKDLSKGS
Trigger: AGAGCCCTTACTTAAATCCTTCACTGGTGTATGAATACTTTGTCATAATGCTGCTTTGCTGGGTAGTGAGCTCTTATTTTTCACTGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282096.9
3UTR TCA 90 bp TGGATAAACCTAGCTGGGAGAATAGCACTGAACAGTGTATTGCATTaGGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGA +
Preference number: 1 (lower is better)
Translates to: WINLAGRIALNSVLH*AEIPQKGNTGFIFR
Trigger: TCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCAGCTAGGTTTATCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
3UTR CCA 90 bp TTAAATACAACAAAGGTCACTCAGTCCTTCATGGATAAACCTAGCTaGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCC +
Preference number: 1 (lower is better)
Translates to: LNTTKVTQSFMDKPS*ENSTEQCIALSRNP
Trigger: GGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCAGCTAGGTTTATCCATGAAGGACTGAGTGACCTTTGTTGTATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
3UTR-3UTR GCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACCTAGGCAATGATTTCTaGCCCTGGGCACAACCCTCT +
Preference number: 2 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHLGNDF*PWAQPS
Trigger: AGAGGGTTGTGCCCAGGGGCAGAAATCATTGCCTAG...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
3UTR-3UTR TCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTGTGAACACTAGGCAATaGTTTCTGCCCCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSVNTRQ*FLPLGT
Trigger: TGTGCCCAGGGGCAGAAATCATTGCCTAGTGTTCAC...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
3UTR-3UTR TCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGTGAACACTAGGCAATaGTTTCTGCCCCTGGGCACA +
Preference number: 2 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNVNTRQ*FLPLGT
Trigger: TGTGCCCAGGGGCAGAAATCATTGCCTAGTGTTCAC...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
3UTR-3UTR GCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATCTAGGCAATGATTTCTaGCCCTGGGCACAACCCTCT +
Preference number: 2 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNLGNDF*PWAQPS
Trigger: AGAGGGTTGTGCCCAGGGGCAGAAATCATTGCCTAG...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
3UTR-3UTR TCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGTTGAGAGTCAGCCGGTaGACACTAGGCAATGATTTC +
Preference number: 2 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMLRVSR*TLGNDF
Trigger: GAAATCATTGCCTAGTGTTCACCGGCTGACTCTCAA...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
3UTR-3UTR TCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTTTGAGAGTCAGCCGGTaGACACTAGGCAATGATTTC +
Preference number: 2 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSLRVSR*TLGNDF
Trigger: GAAATCATTGCCTAGTGTTCACCGGCTGACTCTCAA...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
3UTR-3UTR TCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGATGGGAATGGTCAGTTaGGAGTCAGCCGGTGAACAC +
Preference number: 2 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEMGMVS*ESAGEH
Trigger: GTGTTCACCGGCTGACTCTCAACTGACCATTCCCAT...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
3UTR-3UTR GCA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGATAGGAGTGGGAAACTaGCAGCAGAGCAAGGATCCT +
Preference number: 2 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRIGVGN*QQSKDP
Trigger: AGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTAT...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
3UTR CCA 72 bp ACAAAGGTCACTCAGTCCTTCATGGATAAACCTAGCTaGGAGAATAGCACTGAACAGTGTATTGCATTGAGC +
Preference number: 3 (lower is better)
Translates to: TKVTQSFMDKPS*ENSTEQCIALS
Trigger: GCTCAATGCAATACACTGTTCAGTGCTATTCTCCCAGCTAGGTTTATCCATGAAGGACTGAGTGACCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
3UTR TCA 72 bp AAAAATAAGAGCTCACTACCCAGCAAAGCAGCATTATaGCAAAGTATTCATACACCAGTGAAGGATTTAAGT +
Preference number: 3 (lower is better)
Translates to: KNKSSLPSKAAL*QSIHTPVKDLS
Trigger: ACTTAAATCCTTCACTGGTGTATGAATACTTTGTCATAATGCTGCTTTGCTGGGTAGTGAGCTCTTATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACCCGCGCGGAGGGTCCTaGCGCAAGGGGCTCACGCAG +
Preference number: 4 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHPRGGS*RKGLTQ
Trigger: CTGCGTGAGCCCCTTGCGGCAGGACCCTCCGCGCGG...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACGCACCAGCAGCAACCTaGCCGCTGCCGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHAPAAT*PLPPPG
Trigger: CCCCGGAGGCGGCAGCGGGCAGGTTGCTGCTGGTGC...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCCCGCGCGGAGGGTCCTaGCGCAAGGGGCTCACGCAG +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVPRGGS*RKGLTQ
Trigger: CTGCGTGAGCCCCTTGCGGCAGGACCCTCCGCGCGG...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAGGCTGGGGCCGGGGGTaGCCACGGGACTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGGWGRG*PRDSAH
Trigger: GTGTGCTGAGTCCCGTGGCCACCCCCGGCCCCAGCC...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCGTCCCTCCTCATGGCTaGGGCCGGGGGTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVVPPHG*GRGWPR
Trigger: CCGTGGCCACCCCCGGCCCCAGCCATGAGGAGGGAC...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCGCTCGTCCCTCCTCATaGCTGGGGCCGGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVARPSS*LGPGVA
Trigger: GGCCACCCCCGGCCCCAGCCATGAGGAGGGACGAGC...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGCCGGGACATGCTGGCTaGGGAGAGGGGCGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGPGHAG*GEGRKG
Trigger: CCCCTTCCGCCCCTCTCCTCAGCCAGCATGTCCCGG...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCCAGCAACCTGCCCGCTaGCGCCTCCGGGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVQQPAR*RLRGRV
Trigger: CACACGCCCCCGGAGGCGGCAGCGGGCAGGTTGCTG...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGTCCCTCCTCATGGCTaGGGCCGGGGGTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKVPPHG*GRGWPR
Trigger: CCGTGGCCACCCCCGGCCCCAGCCATGAGGAGGGAC...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAGCGGAGTCCGGGACATaGTGGCTGAGGAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGAESGT*WLRRGA
Trigger: CGCCCCTCTCCTCAGCCAGCATGTCCCGGACTCCGC...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTGCCCCATCCGGCGGCTaGAGGGACCGCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSAPSGG*RDRMAL
Trigger: CAAAGCCATGCGGTCCCTGCAGCCGCCGGATGGGGC...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGACAGCAACCTGCCCGCTaGCGCCTCCGGGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRQQPAR*RLRGRV
Trigger: CACACGCCCCCGGAGGCGGCAGCGGGCAGGTTGCTG...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGCACCAGCAGCAACCTaGCCGCTGCCGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRAPAAT*PLPPPG
Trigger: CCCCGGAGGCGGCAGCGGGCAGGTTGCTGCTGGTGC...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGTTCGGGGCGCCCCCTaGTTCGCAACCCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKVRGAP*FATRQG
Trigger: GCCCTGACGGGTTGCGAACCAGGGGGCGCCCCGAAC...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGGTTCGGGGCGCCCCCTaGTTCGCAACCCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLVRGAP*FATRQG
Trigger: GCCCTGACGGGTTGCGAACCAGGGGGCGCCCCGAAC...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGGCCCCATCCGGCGGCTaGAGGGACCGCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLAPSGG*RDRMAL
Trigger: CAAAGCCATGCGGTCCCTGCAGCCGCCGGATGGGGC...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGGACCGCATGGCTTTaGCGTCTCGCTCGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNGTAWL*RLARPS
Trigger: GGAGGGACGAGCGAGACGCCAAAGCCATGCGGTCCC...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGCGGAGAGCAGCGGCCTaGGGGCGGAGGGCAGCGACC +
Preference number: 4 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRRRAAA*GRRAAT
Trigger: GGTCGCTGCCCTCCGCCCTCAGGCCGCTGCTCTCCG...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGAGTCCGGGACATGCTaGCTGAGGAGAGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMESGTC*LRRGAE
Trigger: TTCCGCCCCTCTCCTCAGCCAGCATGTCCCGGACTC...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGGGGACCGCATGGCTTTaGCGTCTCGCTCGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLGTAWL*RLARPS
Trigger: GGAGGGACGAGCGAGACGCCAAAGCCATGCGGTCCC...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCGCTGCAGGGACCGCATaGCTTTGGCGTCTCGCTCGT +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVAAGTA*LWRLAR
Trigger: ACGAGCGAGACGCCAAAGCCATGCGGTCCCTGCAGC...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACCCCACCAGACGAAGCTaGCCAGGAGCAGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHPTRRS*PGAAPE
Trigger: TTCTGGTGCTGCTCCTGGCCAGCTTCGTCTGGTGGG...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGACTAACGACACGCAGCTaGACCTCCTCCGGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGLTTRS*TSSGVG
Trigger: TCCGACCCCGGAGGAGGTCCAGCTGCGTGTCGTTAG...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCCGGGACATGCTGGCTaGGGAGAGGGGCGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERPGHAG*GEGRKG
Trigger: CCCCTTCCGCCCCTCTCCTCAGCCAGCATGTCCCGG...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGGGGGCTCAAGCTGTaGGAACACACGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVRGLKL*EHTLSS
Trigger: GCTGCTGAGCGTGTGTTCGCACAGCTTGAGCCCCCT...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGGCCAAGACCACCACTaGCACACCAAGAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMGQDHH*HTKKSP
Trigger: GGGGGACTTCTTGGTGTGGCAGTGGTGGTCTTGGCC...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGGCTCGTCCCTCCTCATaGCTGGGGCCGGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRARPSS*LGPGVA
Trigger: GGCCACCCCCGGCCCCAGCCATGAGGAGGGACGAGC...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCAGAAGCGGCAGAGGTaGAAGAAGAAGCCGCGCGGA +
Preference number: 4 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSQKRQR*KKKPRG
Trigger: TCCGCGCGGCTTCTTCTTCCACCTCTGCCGCTTCTG...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGCCCACCAGACGAAGCTaGCCAGGAGCAGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMPTRRS*PGAAPE
Trigger: TTCTGGTGCTGCTCCTGGCCAGCTTCGTCTGGTGGG...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCAGGCACAGGCGATGCTaGAGAGGGGGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVRHRRC*RGGSSC
Trigger: ACAGCTTGAGCCCCCTCTTCAGCATCGCCTGTGCCT...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGAGGCACAGGCGATGCTaGAGAGGGGGCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKRHRRC*RGGSSC
Trigger: ACAGCTTGAGCCCCCTCTTCAGCATCGCCTGTGCCT...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCAGGGGGCTCAAGCTGTaGGAACACACGCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVRGLKL*EHTLSS
Trigger: GCTGCTGAGCGTGTGTTCGCACAGCTTGAGCCCCCT...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGCAGAAGCGGCAGAGGTaGAAGAAGAAGCCGCGCGGA +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKQKRQR*KKKPRG
Trigger: TCCGCGCGGCTTCTTCTTCCACCTCTGCCGCTTCTG...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGACTAACGACACGCAGCTaGACCTCCTCCGGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRLTTRS*TSSGVG
Trigger: TCCGACCCCGGAGGAGGTCCAGCTGCGTGTCGTTAG...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACGTGAACACTAGGCAATaGTTTCTGCCCCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHVNTRQ*FLPLGT
Trigger: TGTGCCCAGGGGCAGAAATCATTGCCTAGTGTTCAC...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCCAGGACCAGTTTAGCTaGCGCCTCCTTTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVQDQFS*RLLFPR
Trigger: CCGAGGGAAAAGGAGGCGGCAGCTAAACTGGTCCTG...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGATGGGAATGGTCAGTTaGGAGTCAGCCGGTGAACAC +
Preference number: 4 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGMGMVS*ESAGEH
Trigger: GTGTTCACCGGCTGACTCTCAACTGACCATTCCCAT...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GATTTAAGTAAGGGCTCTGCAACATGGGTCAACACGGATGGTATTTTTGGTTTAGCGGAGTCCGGGACATaGTGGCTGAGGAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: DLSKGSATWVNTDGIFGLAESGT*WLRRGA
Trigger: CGCCCCTCTCCTCAGCCAGCATGTCCCGGACTCCGC...TAAACCAAAAATACCATCCGTGTTGACCCATGTTGCAGAGCCCTTACTTAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGGCCGCAGCTCCACGTTaGAGAAGCGGCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEAAAPR*RSGRGG
Trigger: TCCACCTCTGCCGCTTCTGCAACGTGGAGCTGCGGC...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACGGGCAGACCAAGATTTaGTTCTTCATCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHGQTKI*FFISLL
Trigger: GAGCAGGGAGATGAAGAAGCAAATCTTGGTCTGCCC...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGGAGTCCGGGACATGCTaGCTGAGGAGAGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERESGTC*LRRGAE
Trigger: TTCCGCCCCTCTCCTCAGCCAGCATGTCCCGGACTC...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGTTTCTTCGGCGGCACTaGACAGTCGAGGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMFLRRH*TVEDEE
Trigger: CTCTTCATCCTCGACTGTCCAGTGCCGCCGAAGAAA...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGTTTCTTCGGCGGCACTaGACAGTCGAGGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGFLRRH*TVEDEE
Trigger: CTCTTCATCCTCGACTGTCCAGTGCCGCCGAAGAAA...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGCTGTCCACATGGGAATaGTCAGTTGAGAGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGLSTWE*SVESQP
Trigger: CGGCTGACTCTCAACTGACCATTCCCATGTGGACAG...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATTCCGTAGAGAGGAAATaGCTTGTGGTGGAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNSVERK*LVVEGL
Trigger: CAAGCCTTCCACCACAAGTCATTTCCTCTCTACGGA...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATTCTGCTTCTAACCACTaGCCTGGTAGCAAACCAGCA +
Preference number: 4 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNSASNH*PGSKPA
Trigger: TGCTGGTTTGCTACCAGGTCAGTGGTTAGAAGCAGA...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGGGCCAAGACCACCACTaGCACACCAAGAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERGQDHH*HTKKSP
Trigger: GGGGGACTTCTTGGTGTGGCAGTGGTGGTCTTGGCC...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGACAACCATTGTGGATCTaGTGTAAGCCAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGQPLWI*CKPGTG
Trigger: GCCAGTTCCTGGCTTACAGCAGATCCACAATGGTTG...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCCTAGGCAATGATTTCTaGCCCTGGGCACAACCCTCT +
Preference number: 4 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVLGNDF*PWAQPS
Trigger: AGAGGGTTGTGCCCAGGGGCAGAAATCATTGCCTAG...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGCTGTCCACATGGGAATaGTCAGTTGAGAGTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKLSTWE*SVESQP
Trigger: CGGCTGACTCTCAACTGACCATTCCCATGTGGACAG...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAGAAGAGGCGCTTCCCTaGTTTGAAAGAAGTGATCCA +
Preference number: 4 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGEEALP*FERSDP
Trigger: TGGATCACTTCTTTCAAATCAGGGAAGCGCCTCTTC...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAGCAACGACGGTCTCCTaGATATTTTGCAACTGCCAT +
Preference number: 4 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGATTVS*IFCNCH
Trigger: ATGGCAGTTGCAAAATATTCAGGAGACCGTCGTTGC...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGCAACGACGGTCTCCTaGATATTTTGCAACTGCCAT +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMATTVS*IFCNCH
Trigger: ATGGCAGTTGCAAAATATTCAGGAGACCGTCGTTGC...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATATCAGTCAGAAGATCTaGCACCATATTGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNISQKI*HHIASL
Trigger: GAGGCTCGCAATATGGTGTCAGATCTTCTGACTGAT...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAAACACCAGCTCTTCTaGGACCTACATGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVKHQLF*DLHGES
Trigger: TGACTCACCATGTAGGTCTCAGAAGAGCTGGTGTTT...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCTCTGCTTCTAACCACTaGCCTGGTAGCAAACCAGCA +
Preference number: 4 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVSASNH*PGSKPA
Trigger: TGCTGGTTTGCTACCAGGTCAGTGGTTAGAAGCAGA...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTTCTTGTGGTTTTCAGTaGGGTGGTGCATTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSSCGFQ*GGALAD
Trigger: GTCAGCTAATGCACCACCTCACTGAAAACCACAAGA...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGTTGAGAGTCAGCCGGTaGACACTAGGCAATGATTTC +
Preference number: 4 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGLRVSR*TLGNDF
Trigger: GAAATCATTGCCTAGTGTTCACCGGCTGACTCTCAA...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GATTTAAGTAAGGGCTCTGCAACATGGGTCAACACGGATGGTATTTTTGGTTTAGCCGCAGCTCCACGTTaGAGAAGCGGCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: DLSKGSATWVNTDGIFGLAAAPR*RSGRGG
Trigger: TCCACCTCTGCCGCTTCTGCAACGTGGAGCTGCGGC...TAAACCAAAAATACCATCCGTGTTGACCCATGTTGCAGAGCCCTTACTTAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGATAGGAGTGGGAAACTaGCAGCAGAGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLIGVGN*QQSKDP
Trigger: AGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTAT...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTGCTGCAGGGACCGCATaGCTTTGGCGTCTCGCTCGT +
Preference number: 4 (lower is better)
Translates to: QCIALSRNPSERQHWIHFAAGTA*LWRLAR
Trigger: ACGAGCGAGACGCCAAAGCCATGCGGTCCCTGCAGC...AAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCAATACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGGAAATGACTTGTGGTaGAAGGCTTGGATCAGTCAG +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMGNDLW*KAWISQ
Trigger: CTGACTGATCCAAGCCTTCCACCACAAGTCATTTCC...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTGCTTCTCCTCAGCTGTaGAGTTGGCAAACTATTCCT +
Preference number: 4 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSASPQL*SWQTIP
Trigger: AGGAATAGTTTGCCAACTCCACAGCTGAGGAGAAGC...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGTCACAGGACTCAGACTaGACAAAACACCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGSQDSD*TKHQLF
Trigger: GAAGAGCTGGTGTTTTGTCCAGTCTGAGTCCTGTGA...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGTTCCACAACCATTGTaGATCTGCTGTAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNVPQPL*ICCKPG
Trigger: TCCTGGCTTACAGCAGATCCACAATGGTTGTGGAAC...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCTGGACAGTCGAGGATaGAGAGGCGCTTCCCTGATT +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERLDSRG*RGASLI
Trigger: AATCAGGGAAGCGCCTCTTCATCCTCGACTGTCCAG...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCTGGACAGTCGAGGATaGAGAGGCGCTTCCCTGATT +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAELDSRG*RGASLI
Trigger: AATCAGGGAAGCGCCTCTTCATCCTCGACTGTCCAG...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAAACACCAGCTCTTCTaGGACCTACATGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLKHQLF*DLHGES
Trigger: TGACTCACCATGTAGGTCTCAGAAGAGCTGGTGTTT...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACGTTTTCTTCTTCACCTaGTTTTCCACTGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHVFFFT*FSTAAI
Trigger: GATTGCTGCAGTGGAAAATCAGGTGAAGAAGAAAAC...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGCTTGGTGAGGTCTTTTaGCATTATTACGATCCCACC +
Preference number: 4 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGLGEVF*HYYDPT
Trigger: GGTGGGATCGTAATAATGGCAAAAGACCTCACCAAG...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCTTGCCCAGAGATCTCTaGAAGATAACGCTTGGCTTA +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVLPRDL*KITLGL
Trigger: TAAGCCAAGCGTTATCTTGCAGAGATCTCTGGGCAA...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGCACCTGATTTTCCACTaGAGCAATCTGTACCATCTG +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMHLIFH*SNLYHL
Trigger: CAGATGGTACAGATTGCTGCAGTGGAAAATCAGGTG...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCTGGGCCATTTATATCTaGCAGTTTGATGCACACCTG +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVWAIYI*QFDAHL
Trigger: CAGGTGTGCATCAAACTGGCAGATATAAATGGCCCA...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGGGCAGACCAAGATTTaGTTCTTCATCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRGQTKI*FFISLL
Trigger: GAGCAGGGAGATGAAGAAGCAAATCTTGGTCTGCCC...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCGAGGAATTCTCCACCTaGAGTTTATTCCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVEEFST*SLFPSA
Trigger: AGCTGATGGGAATAAACTGCAGGTGGAGAATTCCTC...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGAGGAATTCTCCACCTaGAGTTTATTCCCATCAGCT +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMEEFST*SLFPSA
Trigger: AGCTGATGGGAATAAACTGCAGGTGGAGAATTCCTC...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAATAGGAGTGGGAAACTaGCAGCAGAGCAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRIGVGN*QQSKDP
Trigger: AGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTAT...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCTTCTCCTCAGCTGTaGAGTTGGCAAACTATTCCT +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKASPQL*SWQTIP
Trigger: AGGAATAGTTTGCCAACTCCACAGCTGAGGAGAAGC...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGTCACAGGACTCAGACTaGACAAAACACCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKSQDSD*TKHQLF
Trigger: GAAGAGCTGGTGTTTTGTCCAGTCTGAGTCCTGTGA...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGTAGACACTGGTCCATaGTTGGAAGAATTCACAGGA +
Preference number: 4 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNVDTGP*LEEFTG
Trigger: TCCTGTGAATTCTTCCAACCATGGACCAGTGTCTAC...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAGAGCCAGTAGACACTaGTCCATGGTTGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGRASRH*SMVGRI
Trigger: AATTCTTCCAACCATGGACCAGTGTCTACTGGCTCT...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAGATCATAATCATGCATaGCAGCTGCCACGTATAGAG +
Preference number: 4 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGDHNHA*QLPRIE
Trigger: CTCTATACGTGGCAGCTGCCATGCATGATTATGATC...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCAGTTTGATGCACACCTaGCATACCAAGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVSLMHT*HTKRRS
Trigger: TGATCGCCTCTTGGTATGCCAGGTGTGCATCAAACT...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGTCTCGAACTTTTGCTaGGCCATTTATATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNVSNFC*AIYICQ
Trigger: CTGGCAGATATAAATGGCCCAGCAAAAGTTCGAGAC...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTGTCTCGAACTTTTGCTaGGCCATTTATATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSVSNFC*AIYICQ
Trigger: CTGGCAGATATAAATGGCCCAGCAAAAGTTCGAGAC...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAGGGGACCCACTATGTaGGTGATAAAAGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGRGPTM*VIKDSW
Trigger: CCAAGAATCTTTTATCACCCACATAGTGGGTCCCCT...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTTCCTTCCATATCTTGTaGTTTTCAGTGAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSSFHIL*FSVRWC
Trigger: GCACCACCTCACTGAAAACCACAAGATATGGAAGGA...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGAAGAGGCGCTTCCCTaGTTTGAAAGAAGTGATCCA +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLREEALP*FERSDP
Trigger: TGGATCACTTCTTTCAAATCAGGGAAGCGCCTCTTC...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGCTGAGACCTACATGGTaGGTCAGTGATACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKLRPTW*VSDTED
Trigger: ATCTTCTGTATCACTGACTCACCATGTAGGTCTCAG...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACACATATTTCAGCATTTaGTGTCCACAGCTGTTACAC +
Preference number: 4 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHTYFSI*CPQLLH
Trigger: GTGTAACAGCTGTGGACATCAAATGCTGAAATATGT...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAAGGTATACATAACCTaGCTGAGAATCCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHKVYIT*LRILPD
Trigger: ATCAGGAAGGATTCTCAGTCAGGTTATGTATACCTT...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGTTATATCTGCCAGTTTaGTGCACACCTGGCATACCA +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKLYLPV*CTPGIP
Trigger: TGGTATGCCAGGTGTGCATCAAACTGGCAGATATAA...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGTGGAGTTTTGCTAGTTaGGGAGAAGAACGATCCATG +
Preference number: 4 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLWSFAS*GEERSM
Trigger: CATGGATCGTTCTTCTCCTCAACTAGCAAAACTCCA...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAAGGTGGTGCATTAGCTaGCAAAATATTCGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRRWCIS*QNIRRL
Trigger: CAGACGGCGAATATTTTGTCAGCTAATGCACCACCT...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGGTGAACACTAGGCAATaGTTTCTGCCCCTGGGCACA +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEVNTRQ*FLPLGT
Trigger: TGTGCCCAGGGGCAGAAATCATTGCCTAGTGTTCAC...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGATTGAGAGTCAGCCGGTaGACACTAGGCAATGATTTC +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRLRVSR*TLGNDF
Trigger: GAAATCATTGCCTAGTGTTCACCGGCTGACTCTCAA...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCGATCTGACACCATATTaGGAGCCTCATTTAGCACTG +
Preference number: 4 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVDLTPY*EPHLAL
Trigger: CAGTGCTAAATGAGGCTCGCAATATGGTGTCAGATC...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGTGGGCCATTTATATCTaGCAGTTTGATGCACACCTG +
Preference number: 4 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLWAIYI*QFDAHL
Trigger: CAGGTGTGCATCAAACTGGCAGATATAAATGGCCCA...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTGAATCATCTGTTCTCTaGAAATACAAGGCAACGACG +
Preference number: 4 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSESSVL*KYKATT
Trigger: CGTCGTTGCCTTGTATTTCCAGAGAACAGATGATTC...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTATAGCATCCTTGACTTaGAATGCCAAATTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSIASLT*NAKFLV
Trigger: CACCAAGAATTTGGCATTTCAAGTCAAGGATGCTAT...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAAGGTATACATAACCTaGCTGAGAATCCTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVKVYIT*LRILPD
Trigger: ATCAGGAAGGATTCTCAGTCAGGTTATGTATACCTT...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAAAAACGAAAGCGCTTaGATTCCACATGATCAAGAT +
Preference number: 4 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHKNESA*IPHDQD
Trigger: ATCTTGATCATGTGGAATTCAAGCGCTTTCGTTTTT...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGCATTTGCCTTGGCATTaGATTCTGCGAGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMHLPWH*ILRENQ
Trigger: TTGATTTTCTCGCAGAATTCAATGCCAAGGCAAATG...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATCCTTGACTTGAAATaGCAAATTCTTGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGILDLK*QILGEV
Trigger: GACCTCACCAAGAATTTGGCATTTCAAGTCAAGGAT...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAATCTGGAGTATTAGGTaGATTGCCCAGAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRIWSIR*IAQRSL
Trigger: CAGAGATCTCTGGGCAATGCACCTAATACTCCAGAT...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAAAATATTCGCCGTCTaGTTTTCCTTCTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVKIFAV*FSFLVV
Trigger: AACCACCAAGAAGGAAAAGCAGACGGCGAATATTTT...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGATTAGCCTACCATTTTaGCATCATTTTGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMISLPF*HHFGCS
Trigger: AGAGCAGCCAAAATGATGGCAAAATGGTAGGCTAAT...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGAATCATCTGTTCTCTaGAAATACAAGGCAACGACG +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKESSVL*KYKATT
Trigger: CGTCGTTGCCTTGTATTTCCAGAGAACAGATGATTC...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAACACTGGTCCATGGTTaGAAGAATTCACAGGACTCA +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRTLVHG*KNSQDS
Trigger: TGAGTCCTGTGAATTCTTCCAACCATGGACCAGTGT...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGATGGATAAACCTAGCTaGGAGAATAGCACTGAACAG +
Preference number: 4 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLMDKPS*ENSTEQ
Trigger: CTGTTCAGTGCTATTCTCCCAGCTAGGTTTATCCAT...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATATGCCAAATTCTTGGTaGGGTCTTTTGCCATTATTA +
Preference number: 4 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNMPNSW*GLLPLL
Trigger: TAATAATGGCAAAAGACCTCACCAAGAATTTGGCAT...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGAGGTGGTGCATTAGCTaGCAAAATATTCGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERRWCIS*QNIRRL
Trigger: CAGACGGCGAATATTTTGTCAGCTAATGCACCACCT...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGTCTTGTGGTTTTCAGTaGGGTGGTGCATTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAESCGFQ*GGALAD
Trigger: GTCAGCTAATGCACCACCTCACTGAAAACCACAAGA...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGGCCACTTTGGTAACTaGAATATGTCACTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKGHFGN*NMSLEF
Trigger: AAACTCAAGTGACATATTTCAGTTACCAAAGTGGCC...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGATCCTTGACTTGAAATaGCAAATTCTTGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKILDLK*QILGEV
Trigger: GACCTCACCAAGAATTTGGCATTTCAAGTCAAGGAT...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGACAAGTCTCGAACTTTTaGTGGGCCATTTATATCTGC +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRQVSNF*WAIYIC
Trigger: GCAGATATAAATGGCCCAGCAAAAGTTCGAGACTTG...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGGTTCCACAACCATTGTaGATCTGCTGTAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEVPQPL*ICCKPG
Trigger: TCCTGGCTTACAGCAGATCCACAATGGTTGTGGAAC...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGATGCCAAATTCTTGGTaGGGTCTTTTGCCATTATTA +
Preference number: 4 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLMPNSW*GLLPLL
Trigger: TAATAATGGCAAAAGACCTCACCAAGAATTTGGCAT...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAACATATTTCAGCATTTaGTGTCCACAGCTGTTACAC +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRTYFSI*CPQLLH
Trigger: GTGTAACAGCTGTGGACATCAAATGCTGAAATATGT...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGTTGTATAAAACTGCCTaGGGGGCATTTGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERLYKTA*GAFVAT
Trigger: AGTGGCTACAAATGCCCCTCAGGCAGTTTTATACAA...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGTTGTATAAAACTGCCTaGGGGGCATTTGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAELYKTA*GAFVAT
Trigger: AGTGGCTACAAATGCCCCTCAGGCAGTTTTATACAA...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGTGGAGTTTTGCTAGTTaGGGAGAAGAACGATCCATG +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERWSFAS*GEERSM
Trigger: CATGGATCGTTCTTCTCCTCAACTAGCAAAACTCCA...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCTTGGTGAGGTCTTTTaGCATTATTACGATCCCACC +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERLGEVF*HYYDPT
Trigger: GGTGGGATCGTAATAATGGCAAAAGACCTCACCAAG...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGATCTGGAGTATTAGGTaGATTGCCCAGAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEIWSIR*IAQRSL
Trigger: CAGAGATCTCTGGGCAATGCACCTAATACTCCAGAT...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCACCTGATTTTCCACTaGAGCAATCTGTACCATCTG +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEHLIFH*SNLYHL
Trigger: CAGATGGTACAGATTGCTGCAGTGGAAAATCAGGTG...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTCAACCATTGTGGATCTaGTGTAAGCCAGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: QCIALSRNPSERQHWIHFQPLWI*CKPGTG
Trigger: GCCAGTTCCTGGCTTACAGCAGATCCACAATGGTTG...AAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCAATACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGCTTGGCATTGAATTCTaGGAGAAAATCAAAATGCTT +
Preference number: 4 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMLGIEF*EKIKML
Trigger: AAGCATTTTGATTTTCTCGCAGAATTCAATGCCAAG...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAAAAATATTCGCCGTCTaGTTTTCCTTCTTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRKIFAV*FSFLVV
Trigger: AACCACCAAGAAGGAAAAGCAGACGGCGAATATTTT...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTTGCCATCATTTTGGCTaGTCTTTATATCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSCHHFG*SLYLQM
Trigger: CATTTGAAGATATAAAGAGCAGCCAAAATGATGGCA...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCTTGCTGATAAAAATCTaGAGTATTAGGTGCATTGCC +
Preference number: 4 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVLLIKI*SIRCIA
Trigger: GGCAATGCACCTAATACTCCAGATTTTTATCAGCAA...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGGATCATAATCATGCATaGCAGCTGCCACGTATAGAG +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERDHNHA*QLPRIE
Trigger: CTCTATACGTGGCAGCTGCCATGCATGATTATGATC...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGAGTTTGATGCACACCTaGCATACCAAGAGGCGATCA +
Preference number: 4 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRSLMHT*HTKRRS
Trigger: TGATCGCCTCTTGGTATGCCAGGTGTGCATCAAACT...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGAGGGGACCCACTATGTaGGTGATAAAAGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAERGPTM*VIKDSW
Trigger: CCAAGAATCTTTTATCACCCACATAGTGGGTCCCCT...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGTCACTCAGTCCTTCATaGATAAACCTAGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: WENSTEQCIALSRNPSERSLSPS*INLAGR
Trigger: TCTCCCAGCTAGGTTTATCCATGAAGGACTGAGTGA...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGTTATATCTGCCAGTTTaGTGCACACCTGGCATACCA +
Preference number: 4 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRLYLPV*CTPGIP
Trigger: TGGTATGCCAGGTGTGCATCAAACTGGCAGATATAA...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGTTGCCCAGAGATCTCTaGAAGATAACGCTTGGCTTA +
Preference number: 4 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRLPRDL*KITLGL
Trigger: TAAGCCAAGCGTTATCTTGCAGAGATCTCTGGGCAA...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGATTGCTGATAAAAATCTaGAGTATTAGGTGCATTGCC +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRLLIKI*SIRCIA
Trigger: GGCAATGCACCTAATACTCCAGATTTTTATCAGCAA...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGTCCTTCCATATCTTGTaGTTTTCAGTGAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRSFHIL*FSVRWC
Trigger: GCACCACCTCACTGAAAACCACAAGATATGGAAGGA...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGATAGCATCCTTGACTTaGAATGCCAAATTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEIASLT*NAKFLV
Trigger: CACCAAGAATTTGGCATTTCAAGTCAAGGATGCTAT...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR TCA 90 bp CAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTCTGAGACCTACATGGTaGGTCAGTGATACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: QCIALSRNPSERQHWIHFLRPTW*VSDTED
Trigger: ATCTTCTGTATCACTGACTCACCATGTAGGTCTCAG...AAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCAATACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCATTTGCCTTGGCATTaGATTCTGCGAGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEHLPWH*ILRENQ
Trigger: TTGATTTTCTCGCAGAATTCAATGCCAAGGCAAATG...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGACTTGGCATTGAATTCTaGGAGAAAATCAAAATGCTT +
Preference number: 4 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRLGIEF*EKIKML
Trigger: AAGCATTTTGATTTTCTCGCAGAATTCAATGCCAAG...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CCA 90 bp GATTTAAGTAAGGGCTCTGCAACATGGGTCAACACGGATGGTATTTTTGGTTTAGTAGACACTGGTCCATaGTTGGAAGAATTCACAGGA +
Preference number: 4 (lower is better)
Translates to: DLSKGSATWVNTDGIFGLVDTGP*LEEFTG
Trigger: TCCTGTGAATTCTTCCAACCATGGACCAGTGTCTAC...TAAACCAAAAATACCATCCGTGTTGACCCATGTTGCAGAGCCCTTACTTAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGAAAAACGAAAGCGCTTaGATTCCACATGATCAAGAT +
Preference number: 4 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEKNESA*IPHDQD
Trigger: ATCTTGATCATGTGGAATTCAAGCGCTTTCGTTTTT...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR GCA 90 bp GGCTCTGCAACATGGGTCAACACGGATGGTATTTTTGGTTTAAGAATAGTTTTCCAAGTCTCGAACTTTTaGTGGGCCATTTATATCTGC +
Preference number: 4 (lower is better)
Translates to: GSATWVNTDGIFGLRIVFQVSNF*WAIYIC
Trigger: GCAGATATAAATGGCCCAGCAAAAGTTCGAGACTTG...GAAAACTATTCTTAAACCAAAAATACCATCCGTGTTGACCCATGTTGCAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp CATTTCTGTCATGTAGTCTTTAGGCAGAGGGAAATTAACAGAAAGATGAACATCAAGGGCTCTGCAACATaGGTCAACACGGATGGTATT +
Preference number: 4 (lower is better)
Translates to: HFCHVVFRQREINRKMNIKGSAT*VNTDGI
Trigger: AATACCATCCGTGTTGACCCATGTTGCAGAGCCCTT...GATGTTCATCTTTCTGTTAATTTCCCTCTGCCTAAAGACTACATGACAGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp CATTTCTGTCATGTAGTCTTTAGGCAGAGGGAAATTAACAGAAAGATGAACATCATAGCTGACCCCCAGTaGAAAATAAGAGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: HFCHVVFRQREINRKMNIIADPQ*KIRAHY
Trigger: GTAGTGAGCTCTTATTTTTCACTGGGGGTCAGCTAT...GATGTTCATCTTTCTGTTAATTTCCCTCTGCCTAAAGACTACATGACAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGTTTAGAGTGAACAAATaGCAGCTAAGATGTGGATCT +
Preference number: 4 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRFRVNK*QLRCGS
Trigger: AGATCCACATCTTAGCTGTCATTTGTTCACTCTAAA...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp CATTTCTGTCATGTAGTCTTTAGGCAGAGGGAAATTAACAGAAAGATGAACATCAGAGCCAGTAGACACTaGTCCATGGTTGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: HFCHVVFRQREINRKMNIRASRH*SMVGRI
Trigger: AATTCTTCCAACCATGGACCAGTGTCTACTGGCTCT...GATGTTCATCTTTCTGTTAATTTCCCTCTGCCTAAAGACTACATGACAGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp CATTTCTGTCATGTAGTCTTTAGGCAGAGGGAAATTAACAGAAAGATGAACATCGTTTTCTTCTTCACCTaGTTTTCCACTGCAGCAATC +
Preference number: 4 (lower is better)
Translates to: HFCHVVFRQREINRKMNIVFFFT*FSTAAI
Trigger: GATTGCTGCAGTGGAAAATCAGGTGAAGAAGAAAAC...GATGTTCATCTTTCTGTTAATTTCCCTCTGCCTAAAGACTACATGACAGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp CAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTAGCAAAGCAGCATTATaGCAAAGTATTCATACACCA +
Preference number: 4 (lower is better)
Translates to: QCIALSRNPSERQHWIHFSKAAL*QSIHTP
Trigger: TGGTGTATGAATACTTTGTCATAATGCTGCTTTGCT...AAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCAATACACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp CATTTCTGTCATGTAGTCTTTAGGCAGAGGGAAATTAACAGAAAGATGAACATCTGTCCATGGCAAACCTaGATACTCTCAGCAGAAATA +
Preference number: 4 (lower is better)
Translates to: HFCHVVFRQREINRKMNICPWQT*ILSAEI
Trigger: TATTTCTGCTGAGAGTATTCAGGTTTGCCATGGACA...GATGTTCATCTTTCTGTTAATTTCCCTCTGCCTAAAGACTACATGACAGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR TCA 90 bp CATTTCTGTCATGTAGTCTTTAGGCAGAGGGAAATTAACAGAAAGATGAACATCAACAGTGTATTGCATTaGGCAGAAATCCCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: HFCHVVFRQREINRKMNINSVLH*AEIPQK
Trigger: TTTCTGAGGGATTTCTGCTCAATGCAATACACTGTT...GATGTTCATCTTTCTGTTAATTTCCCTCTGCCTAAAGACTACATGACAGAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CCA 90 bp GGCTCTGCAACATGGGTCAACACGGATGGTATTTTTGGTTTAAGAATAGTTTTCGTAAAATCCAGGAAATaGTGTGAGAGGATTAATCTT +
Preference number: 4 (lower is better)
Translates to: GSATWVNTDGIFGLRIVFVKSRK*CERINL
Trigger: AAGATTAATCCTCTCACACCATTTCCTGGATTTTAC...GAAAACTATTCTTAAACCAAAAATACCATCCGTGTTGACCCATGTTGCAGAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR GCA 90 bp CATTTCTGTCATGTAGTCTTTAGGCAGAGGGAAATTAACAGAAAGATGAACATCCACTTGTATGTATTCTaGAGGAGAGGAAATAATAGC +
Preference number: 4 (lower is better)
Translates to: HFCHVVFRQREINRKMNIHLYVF*RRGNNS
Trigger: GCTATTATTTCCTCTCCTGCAGAATACATACAAGTG...GATGTTCATCTTTCTGTTAATTTCCCTCTGCCTAAAGACTACATGACAGAAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS GCA 90 bp CAGCAGCAGCCCTACGCAGCTCAGCACCAGCAGCAACCTGCCCGCTaGCGCCTCCGGGGGCGTGTGCGGGGCCGCGGACCCTGCGTCGCC +
Preference number: 5 (lower is better)
Translates to: QQQPYAAQHQQQPAR*RLRGRVRGRGPCVA
Trigger: GGCGACGCAGGGTCCGCGGCCCCGCACACGCCCCCGGAGGCGGCAGCGGGCAGGTTGCTGCTGGTGCTGAGCTGCGTAGGGCTGCTGCTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS CCA 90 bp GAGGCCGGCGGCGGCCGCAGCTCCACGTTGCAGAAGCGGCAGAGGTaGAAGAAGAAGCCGCGCGGAGGGTCCTGCCGCAAGGGGCTCACG +
Preference number: 5 (lower is better)
Translates to: EAGGGRSSTLQKRQR*KKKPRGGSCRKGLT
Trigger: CGTGAGCCCCTTGCGGCAGGACCCTCCGCGCGGCTTCTTCTTCCACCTCTGCCGCTTCTGCAACGTGGAGCTGCGGCCGCCGCCGGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS GCA 90 bp CTGGCCAGGAGCAGCACCAGAACGCAGTGCCGGAGCCGCAGCGGGTaGGCGAGCGTCAGCAGCAGCCCTACGCAGCTCAGCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LARSSTRTQCRSRSG*ASVSSSPTQLSTSS
Trigger: GCTGCTGGTGCTGAGCTGCGTAGGGCTGCTGCTGACGCTCGCGCACCCGCTGCGGCTCCGGCACTGCGTTCTGGTGCTGCTCCTGGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS CCA 90 bp CAGGGACCGCATGGCTTTGGCGTCTCGCTCGTCCCTCCTCATGGCTaGGGCCGGGGGTGGCCACGGGACTCAGCACACCCCGCTCGTACC +
Preference number: 5 (lower is better)
Translates to: QGPHGFGVSLVPPHG*GRGWPRDSAHPART
Trigger: GGTACGAGCGGGGTGTGCTGAGTCCCGTGGCCACCCCCGGCCCCAGCCATGAGGAGGGACGAGCGAGACGCCAAAGCCATGCGGTCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS GCA 90 bp GAGACCCACCAGACGAAGCTGGCCAGGAGCAGCACCAGAACGCAGTaGCGGAGCCGCAGCGGGTGCGCGAGCGTCAGCAGCAGCCCTACG +
Preference number: 5 (lower is better)
Translates to: ETHQTKLARSSTRTQ*RSRSGCASVSSSPT
Trigger: CGTAGGGCTGCTGCTGACGCTCGCGCACCCGCTGCGGCTCCGGCACTGCGTTCTGGTGCTGCTCCTGGCCAGCTTCGTCTGGTGGGTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS TCA 90 bp CCCACCGCGCGGACTGAGGAGCGGCGGAGTCCGGGACATGCTGGCTaGGGAGAGGGGCGGAAGGGGCTTCTCTCCAGGACCAGTTTAGCT +
Preference number: 5 (lower is better)
Translates to: PTARTEERRSPGHAG*GEGRKGLLSRTSLA
Trigger: AGCTAAACTGGTCCTGGAGAGAAGCCCCTTCCGCCCCTCTCCTCAGCCAGCATGTCCCGGACTCCGCCGCTCCTCAGTCCGCGCGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS GCA 90 bp AGGAAGAAGAAGGCACAGGCGATGCTGAAGAGGGGGCTCAAGCTGTaGGAACACACGCTCAGCAGCGTCCGCAGCCAGGCGGCCCCGGCA +
Preference number: 5 (lower is better)
Translates to: RKKKAQAMLKRGLKL*EHTLSSVRSQAAPA
Trigger: TGCCGGGGCCGCCTGGCTGCGGACGCTGCTGAGCGTGTGTTCGCACAGCTTGAGCCCCCTCTTCAGCATCGCCTGTGCCTTCTTCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS CCA 90 bp GGACATCCCCCTTGCCAGGCACACTGGCCACCCAGTGTCTGTCAGTaGGGAAGGGGAGTCTCATGCCCAGGAGGGAAGGAGAATGCTTCT +
Preference number: 5 (lower is better)
Translates to: GHPPCQAHWPPSVCQ*GRGVSCPGGKENAS
Trigger: AGAAGCATTCTCCTTCCCTCCTGGGCATGAGACTCCCCTTCCCCACTGACAGACACTGGGTGGCCAGTGTGCCTGGCAAGGGGGATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS GCA 90 bp GCACACTGGCCACCCAGTGTCTGTCAGTGGGGAAGGGGAGTCTCATaGCCAGGAGGGAAGGAGAATGCTTCTCCCTGGTCACTGATTGCC +
Preference number: 5 (lower is better)
Translates to: AHWPPSVCQWGRGVS*PGGKENASPWSLIA
Trigger: GGCAATCAGTGACCAGGGAGAAGCATTCTCCTTCCCTCCTGGGCATGAGACTCCCCTTCCCCACTGACAGACACTGGGTGGCCAGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS-3UTR CAA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGGGCCGCAGCTCCACGTaGCAGAAGCGGCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGGRSST*QKRQRW
Trigger: CCACCTCTGCCGCTTCTGCAACGTGGAGCTGCGGCC...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS TCA 90 bp TTTCTTCGGCGGCACTGGACAGTCGAGGATGAAGAGGCGCTTCCCTaGTTTGAAAGAAGTGATCCAACCCCAGGGCCAGCAGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: FLRRHWTVEDEEALP*FERSDPTPGPAGSQ
Trigger: CTGGCTGCCTGCTGGCCCTGGGGTTGGATCACTTCTTTCAAATCAGGGAAGCGCCTCTTCATCCTCGACTGTCCAGTGCCGCCGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS-3UTR CAA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATAGGGACCGCATGGCTTaGGCGTCTCGCTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNRDRMA*ASRSSL
Trigger: GAGGGACGAGCGAGACGCCAAAGCCATGCGGTCCCT...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CCA 90 bp AACTGCCATAGTAACTGGCTGCAGTTTCTCCTAACGACACGCAGCTaGACCTCCTCCGGGGTCGGATCACAGGCACTTTTTCTTCGGCGG +
Preference number: 5 (lower is better)
Translates to: NCHSNWLQFLLTTRS*TSSGVGSQALFLRR
Trigger: CCGCCGAAGAAAAAGTGCCTGTGATCCGACCCCGGAGGAGGTCCAGCTGCGTGTCGTTAGGAGAAACTGCAGCCAGTTACTATGGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS CCA 90 bp GGTGCGCTGCACCCACTAACTCGTCATCTAGCATTTGGTGCCCGTTaGGTTCCCACTAGTCCACAGTCCACACTGGTGCCTTACAGTAGG +
Preference number: 5 (lower is better)
Translates to: GALHPLTRHLAFGAR*VPTSPQSTLVPYSR
Trigger: CCTACTGTAAGGCACCAGTGTGGACTGTGGACTAGTGGGAACCCAACGGGCACCAAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS GCA 90 bp CATTTGGTGCCCGTTGGGTTCCCACTAGTCCACAGTCCACACTGGTaGCTTACAGTAGGGGGAAAGAGAGCTTCCTCAGGTTGGGTCATC +
Preference number: 5 (lower is better)
Translates to: HLVPVGFPLVHSPHW*LTVGGKRASSGWVI
Trigger: GATGACCCAACCTGAGGAAGCTCTCTTTCCCCCTACTGTAAGGCACCAGTGTGGACTGTGGACTAGTGGGAACCCAACGGGCACCAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS GCA 90 bp CTGTCAGTGGGGAAGGGGAGTCTCATGCCCAGGAGGGAAGGAGAATaGTTCTCCCTGGTCACTGATTGCCAGTGGTTCCAAATCAATTCC +
Preference number: 5 (lower is better)
Translates to: LSVGKGSLMPRREGE*FSLVTDCQWFQINS
Trigger: GGAATTGATTTGGAACCACTGGCAATCAGTGACCAGGGAGAAGCATTCTCCTTCCCTCCTGGGCATGAGACTCCCCTTCCCCACTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS-3UTR CAA 90 bp CAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTGGGCCGGGTCCCCGCTaGGTCCGGGTGAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: QCIALSRNPSERQHWIHFGPGPR*VRVRKQ
Trigger: CTGCTTCCTCACCCGGACCAAGCGGGGACCCGGCCC...AAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCAATACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS TCA 90 bp GGCAGAGAGACTAGCAAGTGCAAAGACCTGAGTCAGAAGCCTGTCTaGCTTGTTTGGGGAATAACAAGGAGGCCAGTGCAGCTGGAACAG +
Preference number: 5 (lower is better)
Translates to: GRETSKCKDLSQKPV*LVWGITRRPVQLEQ
Trigger: CTGTTCCAGCTGCACTGGCCTCCTTGTTATTCCCCAAACAAGTCAGACAGGCTTCTGACTCAGGTCTTTGCACTTGCTAGTCTCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS-3UTR CAA 90 bp GATTTAAGTAAGGGCTCTGCAACATGGGTCAACACGGATGGTATTTTTGGTTTAGGCCGCAGCTCCACGTaGCAGAAGCGGCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: DLSKGSATWVNTDGIFGLGRSST*QKRQRW
Trigger: CCACCTCTGCCGCTTCTGCAACGTGGAGCTGCGGCC...TAAACCAAAAATACCATCCGTGTTGACCCATGTTGCAGAGCCCTTACTTAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp CAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTAGGGACCGCATGGCTTaGGCGTCTCGCTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: QCIALSRNPSERQHWIHFRDRMA*ASRSSL
Trigger: GAGGGACGAGCGAGACGCCAAAGCCATGCGGTCCCT...AAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCAATACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAAGGCGCTTCCCTGATTaGAAAGAAGTGATCCAACCC +
Preference number: 5 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGRRFPD*KEVIQP
Trigger: GGGTTGGATCACTTCTTTCAAATCAGGGAAGCGCCT...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGGACACTGGTCCATGGTaGGAAGAATTCACAGGACTC +
Preference number: 5 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGDTGPW*EEFTGL
Trigger: GAGTCCTGTGAATTCTTCCAACCATGGACCAGTGTC...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGCCTGTTCCACAACCATaGTGGATCTGCTGTAAGCCA +
Preference number: 5 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMPVPQP*WICCKP
Trigger: TGGCTTACAGCAGATCCACAATGGTTGTGGAACAGG...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS TCA 90 bp GTTGGGTCATCTGGTACCTTTAGGGGAGAGAAAGGAGTCTCCAGGTaGCAGGAACAAAGATCACTTTCTGGGCTAGGCATTTGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: VGSSGTFRGEKGVSR*QEQRSLSGLGICED
Trigger: GTCCTCACAAATGCCTAGCCCAGAAAGTGATCTTTGTTCCTGTCACCTGGAGACTCCTTTCTCTCCCCTAAAGGTACCAGATGACCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS-3UTR CAA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGAGGCGCTTCCCTGATTaGAAAGAAGTGATCCAACCC +
Preference number: 5 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKRRFPD*KEVIQP
Trigger: GGGTTGGATCACTTCTTTCAAATCAGGGAAGCGCCT...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGACACTGGTCCATGGTaGGAAGAATTCACAGGACTC +
Preference number: 5 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKDTGPW*EEFTGL
Trigger: GAGTCCTGTGAATTCTTCCAACCATGGACCAGTGTC...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACTTTATATCTGCCAGTTaGATGCACACCTGGCATACC +
Preference number: 5 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHFISAS*MHTWHT
Trigger: GGTATGCCAGGTGTGCATCAAACTGGCAGATATAAA...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACGCAAGTCTCGAACTTTaGCTGGGCCATTTATATCTG +
Preference number: 5 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHASLEL*LGHLYL
Trigger: CAGATATAAATGGCCCAGCAAAAGTTCGAGACTTGC...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp CAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGATCTGACACCATATaGCGAGCCTCATTTAGCACT +
Preference number: 5 (lower is better)
Translates to: QQSKDPLTVLRPVHMGMVRSDTI*RASFST
Trigger: AGTGCTAAATGAGGCTCGCAATATGGTGTCAGATCT...GACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAAGATCTGACACCATATaGCGAGCCTCATTTAGCACT +
Preference number: 5 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGRSDTI*RASFST
Trigger: AGTGCTAAATGAGGCTCGCAATATGGTGTCAGATCT...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGGAGTATTAGGTGCATaGCCCAGAGATCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRGVLGA*PRDLCK
Trigger: CTTGCAGAGATCTCTGGGCAATGCACCTAATACTCC...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACATTTCCTTCCATATCTaGTGGTTTTCAGTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHISFHI*WFSVRW
Trigger: CCACCTCACTGAAAACCACAAGATATGGAAGGAAAT...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS TCA 90 bp GGACTCAGACTGGACAAAACACCAGCTCTTCTGAGACCTACATGGTaGGTCAGTGATACAGAAGATGACCTTTGCTTCGGGATAGTCAGT +
Preference number: 5 (lower is better)
Translates to: GLRLDKTPALLRPTW*VSDTEDDLCFGIVS
Trigger: ACTGACTATCCCGAAGCAAAGGTCATCTTCTGTATCACTGACTCACCATGTAGGTCTCAGAAGAGCTGGTGTTTTGTCCAGTCTGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS GCA 90 bp GGCTGGGAGACCGAAATTGGAGTTCAGAGCTATGAAGACAGGGGGTaGCAAACAAGATCCCAAAGTGATGAGAAAAACAAAGTAGTGAGC +
Preference number: 5 (lower is better)
Translates to: GWETEIGVQSYEDRG*QTRSQSDEKNKVVS
Trigger: GCTCACTACTTTGTTTTTCTCATCACTTTGGGATCTTGTTTGGCACCCCCTGTCTTCATAGCTCTGAACTCCAATTTCGGTCTCCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS-3UTR CAA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCTTTATATCTGCCAGTTaGATGCACACCTGGCATACC +
Preference number: 5 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVFISAS*MHTWHT
Trigger: GGTATGCCAGGTGTGCATCAAACTGGCAGATATAAA...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAAGATTCTTGGAGTTTaGCTAGTTGAGGAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHKILGV*LVEEKN
Trigger: GTTCTTCTCCTCAACTAGCAAAACTCCAAGAATCTT...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp CCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACGTCTGCTTTTCCTTCTaGGTGGTTTTGGATTTAGAT +
Preference number: 5 (lower is better)
Translates to: PVKVHRSGKLPAEQGSSHVCFSF*VVLDLD
Trigger: ATCTAAATCCAAAACCACCAAGAAGGAAAAGCAGAC...GTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS GCA 90 bp CTTGTGGTGGAAGGCTTGGATCAGTCAGAAGATCTGACACCATATTaGGAGCCTCATTTAGCACTGAAAGATCAACTCCATTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: LVVEGLDQSEDLTPY*EPHLALKDQLHFHL
Trigger: GAGGTGGAAATGGAGTTGATCTTTCAGTGCTAAATGAGGCTCGCAATATGGTGTCAGATCTTCTGACTGATCCAAGCCTTCCACCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTTCCACCTCCAGAATTTaGATAATGAGGCTTATACCA +
Preference number: 5 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSSTSRI*IMRLIP
Trigger: TGGTATAAGCCTCATTATCAAAATTCTGGAGGTGGA...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGTCCTCAGCTGTGGAGTaGGCAAACTATTCCTATTTA +
Preference number: 5 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKSSAVE*ANYSYL
Trigger: TAAATAGGAATAGTTTGCCAACTCCACAGCTGAGGA...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp CTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGATAGCATCCTTGACTaGAAATGCCAAATTCTTGGT +
Preference number: 5 (lower is better)
Translates to: LPAEQGSSHSIKACPHGNDSILD*KCQILG
Trigger: ACCAAGAATTTGGCATTTCAAGTCAAGGATGCTATC...ATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGCTTCCTGTTCAATATTaGTTTGCTGTTCACTCTGTG +
Preference number: 5 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMLPVQY*FAVHSV
Trigger: CACAGAGTGAACAGCAAACAAATATTGAACAGGAAG...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGCTTCCTGTTCAATATTaGTTTGCTGTTCACTCTGTG +
Preference number: 5 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGLPVQY*FAVHSV
Trigger: CACAGAGTGAACAGCAAACAAATATTGAACAGGAAG...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp CAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGACTAATGCAGGAATGTTaGAAGACAGGCAGCCATAAC +
Preference number: 5 (lower is better)
Translates to: QGSSHSIKACPHGNGQLRLMQEC*KTGSHN
Trigger: GTTATGGCTGCCTGTCTTCAAACATTCCTGCATTAG...TCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTTCATTTGCCTTGGCATaGAATTCTGCGAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSSFALA*NSARKS
Trigger: TGATTTTCTCGCAGAATTCAATGCCAAGGCAAATGA...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGTCATTTGCCTTGGCATaGAATTCTGCGAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMSFALA*NSARKS
Trigger: TGATTTTCTCGCAGAATTCAATGCCAAGGCAAATGA...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp AACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGATTTACATCATTTGCCTaGGCATTGAATTCTGCGAGA +
Preference number: 5 (lower is better)
Translates to: NCQQSKDPLTVLRPVHMGFTSFA*ALNSAR
Trigger: TCTCGCAGAATTCAATGCCAAGGCAAATGATGTAAA...TCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGGGAGTATTAGGTGCATaGCCCAGAGATCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRGVLGA*PRDLCK
Trigger: CTTGCAGAGATCTCTGGGCAATGCACCTAATACTCC...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCAGCTGTTACACAGATaGCTATCAGAATTTCTAAGT +
Preference number: 5 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSQLLHR*LSEFLS
Trigger: ACTTAGAAATTCTGATAGCAATCTGTGTAACAGCTG...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp TGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGAACATATTTCAGCATTaGATGTCCACAGCTGTTACA +
Preference number: 5 (lower is better)
Translates to: CQQSKDPLTVLRPVHMGMNIFQH*MSTAVT
Trigger: TGTAACAGCTGTGGACATCAAATGCTGAAATATGTT...CATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp AAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAACATATTTCAGCATTaGATGTCCACAGCTGTTACA +
Preference number: 5 (lower is better)
Translates to: KLPAEQGSSHSIKACPHGNIFQH*MSTAVT
Trigger: TGTAACAGCTGTGGACATCAAATGCTGAAATATGTT...CCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp GTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCTCTGTTTCCTCTTCTaGTTGAGTTTCCATAAGTTT +
Preference number: 5 (lower is better)
Translates to: VPVKVHRSGKLPAEQGSSLCFLF*LSFHKF
Trigger: AAACTTATGGAAACTCAACAAGAAGAGGAAACAGAG...AGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGCCTGTTCCACAACCATaGTGGATCTGCTGTAAGCCA +
Preference number: 5 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRPVPQP*WICCKP
Trigger: TGGCTTACAGCAGATCCACAATGGTTGTGGAACAGG...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp GGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGAGAGTCGTCTGCTTTTCCTTCTaGGTGGTTTTGGATTTAGAT +
Preference number: 5 (lower is better)
Translates to: GSSHSIKACPHGNGQLRVVCFSF*VVLDLD
Trigger: ATCTAAATCCAAAACCACCAAGAAGGAAAAGCAGAC...GACTCTCAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS GCA 90 bp GATATCTACAATAGGAGAATAAGCTCACTCTTGGGAGATACTGCTTaGAACGGCTTCCCACACCTACTGCCACTTGAACATCAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: DIYNRRISSLLGDTA*NGFPHLLPLEHQKN
Trigger: GTTTTTCTGATGTTCAAGTGGCAGTAGGTGTGGGAAGCCGTTGCAAGCAGTATCTCCCAAGAGTGAGCTTATTCTCCTATTGTAGATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532740.1
CDS CCA 90 bp ATTCTACCATCAGAATCTGTTTCATTTCCTGTTCCACAACCATTGTaGATCTGCTGTAAGCCAGGAACTGGCCGTGTTGTCAGATACCAA +
Preference number: 5 (lower is better)
Translates to: ILPSESVSFPVPQPL*ICCKPGTGRVVRYQ
Trigger: TTGGTATCTGACAACACGGCCAGTTCCTGGCTTACAGCAGATCCACAATGGTTGTGGAACAGGAAATGAAACAGATTCTGATGGTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CCA 90 bp GACAATGCCTTCTGTCCATTTCAAATGCAAGTCTCGAACTTTTGCTaGGCCATTTATATCTGCCAGTTTGATGCACACCTGGCATACCAA +
Preference number: 5 (lower is better)
Translates to: DNAFCPFQMQVSNFC*AIYICQFDAHLAYQ
Trigger: TTGGTATGCCAGGTGTGCATCAAACTGGCAGATATAAATGGCCCAGCAAAAGTTCGAGACTTGCATTTGAAATGGACAGAAGGCATTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp GAGCAAGGATCCTCTCACAGTATTAAGGCCTGTCCACATGGGAATGGTCAGTTGCAGCTGTTACACAGATaGCTATCAGAATTTCTAAGT +
Preference number: 5 (lower is better)
Translates to: EQGSSHSIKACPHGNGQLQLLHR*LSEFLS
Trigger: ACTTAGAAATTCTGATAGCAATCTGTGTAACAGCTG...CAACTGACCATTCCCATGTGGACAGGCCTTAATACTGTGAGAGGATCCTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp GTGCATAGGAGTGGGAAACTGCCAGCAGAGCAAGGATCCTCTCACAGTATTAAGTCCTTCTTGGTGGTTTaGGATTTAGATTGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: VHRSGKLPAEQGSSHSIKSFLVV*DLDCFP
Trigger: TGGAAAACAATCTAAATCCAAAACCACCAAGAAGGA...CTTAATACTGTGAGAGGATCCTTGCTCTGCTGGCAGTTTCCCACTCCTATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS GCA 90 bp ATTGACAATGCCTTCTGTCCATTTCAAATGCAAGTCTCGAACTTTTaGTGGGCCATTTATATCTGCCAGTTTGATGCACACCTGGCATAC +
Preference number: 5 (lower is better)
Translates to: IDNAFCPFQMQVSNF*WAIYICQFDAHLAY
Trigger: GTATGCCAGGTGTGCATCAAACTGGCAGATATAAATGGCCCAGCAAAAGTTCGAGACTTGCATTTGAAATGGACAGAAGGCATTGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGTCCTCAGCTGTGGAGTaGGCAAACTATTCCTATTTA +
Preference number: 5 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAESSAVE*ANYSYL
Trigger: TAAATAGGAATAGTTTGCCAACTCCACAGCTGAGGA...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGTATTACGATCCCACCTaGAAGACTGTTCAACAGGTA +
Preference number: 5 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAEYYDPT*KTVQQV
Trigger: TACCTGTTGAACAGTCTTCAAGGTGGGATCGTAATA...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGGCAAGTCTCGAACTTTaGCTGGGCCATTTATATCTG +
Preference number: 5 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRASLEL*LGHLYL
Trigger: CAGATATAAATGGCCCAGCAAAAGTTCGAGACTTGC...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS GCA 90 bp GATAGCATCCTTGACTTGAAATGCCAAATTCTTGGTGAGGTCTTTTaGCATTATTACGATCCCACCTTGAAGACTGTTCAACAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: DSILDLKCQILGEVF*HYYDPTLKTVQQVA
Trigger: TGCTACCTGTTGAACAGTCTTCAAGGTGGGATCGTAATAATGGCAAAAGACCTCACCAAGAATTTGGCATTTCAAGTCAAGGATGCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS CCA 90 bp CAGAGTGTCTTAAGAGGCTTGCCTAATTTTCCAGCTAAGAGGGACTaGTTTGTATCAGACCAACTCTTCTGTCTAGAACAACTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: QSVLRGLPNFPAKRD*FVSDQLFCLEQLEK
Trigger: CTTTTCTAGTTGTTCTAGACAGAAGAGTTGGTCTGATACAAACCAGTCCCTCTTAGCTGGAAAATTAGGCAAGCCTCTTAAGACACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS-3UTR CAA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGTCCACCTCCAGAATTTaGATAATGAGGCTTATACCA +
Preference number: 5 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAESTSRI*IMRLIP
Trigger: TGGTATAAGCCTCATTATCAAAATTCTGGAGGTGGA...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp TGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTAGACAGGATTTCCTTCCATATCTaGTGGTTTTCAGTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: CIEQKSLRKATLDSFLDRISFHI*WFSVRW
Trigger: CCACCTCACTGAAAACCACAAGATATGGAAGGAAAT...CCTGTCTAAAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp TGGGAGAATAGCACTGAACAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGTTCCTATTTAGTCCCTaGTTAAGTTTTCTATCCCCT +
Preference number: 5 (lower is better)
Translates to: WENSTEQCIALSRNPSERFLFSP*LSFLSP
Trigger: AGGGGATAGAAAACTTAACAAGGGACTAAATAGGAA...CCTTTCTGAGGGATTTCTGCTCAATGCAATACACTGTTCAGTGCTATTCTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp GATTTAAGTAAGGGCTCTGCAACATGGGTCAACACGGATGGTATTTTTGGTTTATATTACGATCCCACCTaGAAGACTGTTCAACAGGTA +
Preference number: 5 (lower is better)
Translates to: DLSKGSATWVNTDGIFGLYYDPT*KTVQQV
Trigger: TACCTGTTGAACAGTCTTCAAGGTGGGATCGTAATA...TAAACCAAAAATACCATCCGTGTTGACCCATGTTGCAGAGCCCTTACTTAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGCTCTGTTTCCTCTTCTaGTTGAGTTTCCATAAGTTT +
Preference number: 5 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAELCFLF*LSFHKF
Trigger: AAACTTATGGAAACTCAACAAGAAGAGGAAACAGAG...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp AATAGTTTTCTAGTTCCTGTGAAAGTGCATAGGAGTGGGAAACTGCCAGCAGAGTCCTTCTTGGTGGTTTaGGATTTAGATTGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: NSFLVPVKVHRSGKLPAESFLVV*DLDCFP
Trigger: TGGAAAACAATCTAAATCCAAAACCACCAAGAAGGA...CTCTGCTGGCAGTTTCCCACTCCTATGCACTTTCACAGGAACTAGAAAACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS-3UTR CAA 90 bp GGCTCTGCAACATGGGTCAACACGGATGGTATTTTTGGTTTAAGAATAGTTTTCGAACAGTGTATTGCATaGAGCAGAAATCCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: GSATWVNTDGIFGLRIVFEQCIA*SRNPSE
Trigger: TTCTGAGGGATTTCTGCTCAATGCAATACACTGTTC...GAAAACTATTCTTAAACCAAAAATACCATCCGTGTTGACCCATGTTGCAGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp CAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTTTACATCATTTGCCTaGGCATTGAATTCTGCGAGA +
Preference number: 5 (lower is better)
Translates to: QCIALSRNPSERQHWIHFFTSFA*ALNSAR
Trigger: TCTCGCAGAATTCAATGCCAAGGCAAATGATGTAAA...AAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCAATACACTG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp GATTTAAGTAAGGGCTCTGCAACATGGGTCAACACGGATGGTATTTTTGGTTTAAAGATTCTTGGAGTTTaGCTAGTTGAGGAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: DLSKGSATWVNTDGIFGLKILGV*LVEEKN
Trigger: GTTCTTCTCCTCAACTAGCAAAACTCCAAGAATCTT...TAAACCAAAAATACCATCCGTGTTGACCCATGTTGCAGAGCCCTTACTTAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS-3UTR CAA 90 bp CAGTGTATTGCATTGAGCAGAAATCCCTCAGAAAGGCAACACTGGATTCATTTTTCTCAGAAATCAGTCTaGCAGTTAGGCTTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: QCIALSRNPSERQHWIHFSQKSV*QLGFRN
Trigger: ATTTCTGAAGCCTAACTGCAAGACTGATTTCTGAGA...AAAATGAATCCAGTGTTGCCTTTCTGAGGGATTTCTGCTCAATGCAATACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS GCA 90 bp GCTATCAGAATTTCTAAGTTGCTGATAAAAATCTGGAGTATTAGGTaGATTGCCCAGAGATCTCTGCAAGATAACGCTTGGCTTATTAAG +
Preference number: 5 (lower is better)
Translates to: AIRISKLLIKIWSIR*IAQRSLQDNAWLIK
Trigger: CTTAATAAGCCAAGCGTTATCTTGCAGAGATCTCTGGGCAATGCACCTAATACTCCAGATTTTTATCAGCAACTTAGAAATTCTGATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS CCA 90 bp GTTACACAGATTGCTATCAGAATTTCTAAGTTGCTGATAAAAATCTaGAGTATTAGGTGCATTGCCCAGAGATCTCTGCAAGATAACGCT +
Preference number: 5 (lower is better)
Translates to: VTQIAIRISKLLIKI*SIRCIAQRSLQDNA
Trigger: AGCGTTATCTTGCAGAGATCTCTGGGCAATGCACCTAATACTCCAGATTTTTATCAGCAACTTAGAAATTCTGATAGCAATCTGTGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS CCA 72 bp CGGCCCCATCCGGCGGCTGCAGGGACCGCATGGCTTTaGCGTCTCGCTCGTCCCTCCTCATGGCTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: RPHPAAAGTAWL*RLARPSSWLGP
Trigger: CGGCCCCAGCCATGAGGAGGGACGAGCGAGACGCCAAAGCCATGCGGTCCCTGCAGCCGCCGGATGGGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CAA 72 bp CCGGCCCCATCCGGCGGCTGCAGGGACCGCATGGCTTaGGCGTCTCGCTCGTCCCTCCTCATGGCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: PAPSGGCRDRMA*ASRSSLLMAGA
Trigger: GGCCCCAGCCATGAGGAGGGACGAGCGAGACGCCAAAGCCATGCGGTCCCTGCAGCCGCCGGATGGGGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CAA 90 bp AGCAGCCACCAGGAGCCGCAGCTCCGGCCCGGGCCGGGTCCCCGCTaGGTCCGGGTGAGGAAGCAGGTGAGGAAGAAGAAGGCACAGGCG +
Preference number: 6 (lower is better)
Translates to: SSHQEPQLRPGPGPR*VRVRKQVRKKKAQA
Trigger: CGCCTGTGCCTTCTTCTTCCTCACCTGCTTCCTCACCCGGACCAAGCGGGGACCCGGCCCGGGCCGGAGCTGCGGCTCCTGGTGGCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS GCA 72 bp AGCAGCACCAGAACGCAGTGCCGGAGCCGCAGCGGGTaGGCGAGCGTCAGCAGCAGCCCTACGCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SSTRTQCRSRSG*ASVSSSPTQLS
Trigger: GCTGAGCTGCGTAGGGCTGCTGCTGACGCTCGCGCACCCGCTGCGGCTCCGGCACTGCGTTCTGGTGCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS CCA 72 bp CATGGCTTTGGCGTCTCGCTCGTCCCTCCTCATGGCTaGGGCCGGGGGTGGCCACGGGACTCAGCACACCCC +
Preference number: 6 (lower is better)
Translates to: HGFGVSLVPPHG*GRGWPRDSAHP
Trigger: GGGGTGTGCTGAGTCCCGTGGCCACCCCCGGCCCCAGCCATGAGGAGGGACGAGCGAGACGCCAAAGCCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CCA 72 bp ACCGCATGGCTTTGGCGTCTCGCTCGTCCCTCCTCATaGCTGGGGCCGGGGGTGGCCACGGGACTCAGCACA +
Preference number: 6 (lower is better)
Translates to: TAWLWRLARPSS*LGPGVATGLST
Trigger: TGTGCTGAGTCCCGTGGCCACCCCCGGCCCCAGCCATGAGGAGGGACGAGCGAGACGCCAAAGCCATGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CCA 72 bp GGCGGCCGCAGCTCCACGTTGCAGAAGCGGCAGAGGTaGAAGAAGAAGCCGCGCGGAGGGTCCTGCCGCAAG +
Preference number: 6 (lower is better)
Translates to: GGRSSTLQKRQR*KKKPRGGSCRK
Trigger: CTTGCGGCAGGACCCTCCGCGCGGCTTCTTCTTCCACCTCTGCCGCTTCTGCAACGTGGAGCTGCGGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS GCA 72 bp AAGGCACAGGCGATGCTGAAGAGGGGGCTCAAGCTGTaGGAACACACGCTCAGCAGCGTCCGCAGCCAGGCG +
Preference number: 6 (lower is better)
Translates to: KAQAMLKRGLKL*EHTLSSVRSQA
Trigger: CGCCTGGCTGCGGACGCTGCTGAGCGTGTGTTCGCACAGCTTGAGCCCCCTCTTCAGCATCGCCTGTGCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS CCA 72 bp CCTTGCCAGGCACACTGGCCACCCAGTGTCTGTCAGTaGGGAAGGGGAGTCTCATGCCCAGGAGGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: PCQAHWPPSVCQ*GRGVSCPGGKE
Trigger: CTCCTTCCCTCCTGGGCATGAGACTCCCCTTCCCCACTGACAGACACTGGGTGGCCAGTGTGCCTGGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CAA 90 bp TTCGGCGGCACTGGACAGTCGAGGATGAAGAGGCGCTTCCCTGATTaGAAAGAAGTGATCCAACCCCAGGGCCAGCAGGCAGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: FGGTGQSRMKRRFPD*KEVIQPQGQQAASA
Trigger: GGCGCTGGCTGCCTGCTGGCCCTGGGGTTGGATCACTTCTTTCAAATCAGGGAAGCGCCTCTTCATCCTCGACTGTCCAGTGCCGCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS TCA 72 bp CGGCACTGGACAGTCGAGGATGAAGAGGCGCTTCCCTaGTTTGAAAGAAGTGATCCAACCCCAGGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: RHWTVEDEEALP*FERSDPTPGPA
Trigger: TGCTGGCCCTGGGGTTGGATCACTTCTTTCAAATCAGGGAAGCGCCTCTTCATCCTCGACTGTCCAGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS GCA 72 bp GGGAAGGGGAGTCTCATGCCCAGGAGGGAAGGAGAATaGTTCTCCCTGGTCACTGATTGCCAGTGGTTCCAA +
Preference number: 6 (lower is better)
Translates to: GKGSLMPRREGE*FSLVTDCQWFQ
Trigger: TTGGAACCACTGGCAATCAGTGACCAGGGAGAAGCATTCTCCTTCCCTCCTGGGCATGAGACTCCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS GCA 72 bp CCCGTTGGGTTCCCACTAGTCCACAGTCCACACTGGTaGCTTACAGTAGGGGGAAAGAGAGCTTCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: PVGFPLVHSPHW*LTVGGKRASSG
Trigger: ACCTGAGGAAGCTCTCTTTCCCCCTACTGTAAGGCACCAGTGTGGACTGTGGACTAGTGGGAACCCAACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS TCA 72 bp ACAGGAACAAAGATCACTTTCTGGGCTAGGCATTTGTaGGGACATCCCCCTTGCCAGGCACACTGGCCACCC +
Preference number: 6 (lower is better)
Translates to: TGTKITFWARHL*GHPPCQAHWPP
Trigger: GGGTGGCCAGTGTGCCTGGCAAGGGGGATGTCCTCACAAATGCCTAGCCCAGAAAGTGATCTTTGTTCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CAA 72 bp ACTGGACAGTCGAGGATGAAGAGGCGCTTCCCTGATTaGAAAGAAGTGATCCAACCCCAGGGCCAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: TGQSRMKRRFPD*KEVIQPQGQQA
Trigger: TGCCTGCTGGCCCTGGGGTTGGATCACTTCTTTCAAATCAGGGAAGCGCCTCTTCATCCTCGACTGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS TCA 72 bp GCCCAGGAGGGAAGGAGAATGCTTCTCCCTGGTCACTaGTTGCCAGTGGTTCCAAATCAATTCCCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: AQEGRRMLLPGH*LPVVPNQFPLA
Trigger: AGCAAGGGGGAATTGATTTGGAACCACTGGCAATCAGTGACCAGGGAGAAGCATTCTCCTTCCCTCCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CCA 72 bp GTCTCATGCCCAGGAGGGAAGGAGAATGCTTCTCCCTaGTCACTGATTGCCAGTGGTTCCAAATCAATTCCC +
Preference number: 6 (lower is better)
Translates to: VSCPGGKENASP*SLIASGSKSIP
Trigger: GGGAATTGATTTGGAACCACTGGCAATCAGTGACCAGGGAGAAGCATTCTCCTTCCCTCCTGGGCATGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CAA 72 bp GTCACTGATTGCCAGTGGTTCCAAATCAATTCCCCCTaGCTAGAGCCACCAGACTTGCCTAGTGTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: VTDCQWFQINSP*LEPPDLPSVGR
Trigger: CCTGCCAACACTAGGCAAGTCTGGTGGCTCTAGCAAGGGGGAATTGATTTGGAACCACTGGCAATCAGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CAA 72 bp GTGCCTTACAGTAGGGGGAAAGAGAGCTTCCTCAGGTaGGGTCATCTGGTACCTTTAGGGGAGAGAAAGGAG +
Preference number: 6 (lower is better)
Translates to: VPYSRGKESFLR*GHLVPLGERKE
Trigger: CTCCTTTCTCTCCCCTAAAGGTACCAGATGACCCAACCTGAGGAAGCTCTCTTTCCCCCTACTGTAAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CAA 90 bp TTCTCCCTGGTCACTGATTGCCAGTGGTTCCAAATCAATTCCCCCTaGCTAGAGCCACCAGACTTGCCTAGTGTTGGCAGGGCTCTTGTT +
Preference number: 6 (lower is better)
Translates to: FSLVTDCQWFQINSP*LEPPDLPSVGRALV
Trigger: AACAAGAGCCCTGCCAACACTAGGCAAGTCTGGTGGCTCTAGCAAGGGGGAATTGATTTGGAACCACTGGCAATCAGTGACCAGGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS GCA 72 bp AGGAGGGAAGGAGAATGCTTCTCCCTGGTCACTGATTaGCAGTGGTTCCAAATCAATTCCCCCTTGCTAGAG +
Preference number: 6 (lower is better)
Translates to: RREGECFSLVTD*QWFQINSPLLE
Trigger: CTCTAGCAAGGGGGAATTGATTTGGAACCACTGGCAATCAGTGACCAGGGAGAAGCATTCTCCTTCCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CCA 72 bp GAGAGTGGGGGCCTAGACCAGGTTTGCTGTTGGGTGTaGGTCATAAGAGACTCTGTCACTGTGTTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: ESGGLDQVCCWV*VIRDSVTVLFF
Trigger: GAAAAACAACACAGTGACAGAGTCTCTTATGACCCACACCCAACAGCAAACCTGGTCTAGGCCCCCACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CCA 72 bp GAAGGAGAATGCTTCTCCCTGGTCACTGATTGCCAGTaGTTCCAAATCAATTCCCCCTTGCTAGAGCCACCA +
Preference number: 6 (lower is better)
Translates to: EGECFSLVTDCQ*FQINSPLLEPP
Trigger: TGGTGGCTCTAGCAAGGGGGAATTGATTTGGAACCACTGGCAATCAGTGACCAGGGAGAAGCATTCTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CAA 72 bp GTGCAAAGACCTGAGTCAGAAGCCTGTCTGACTTGTTaGGGGAATAACAAGGAGGCCAGTGCAGCTGGAACA +
Preference number: 6 (lower is better)
Translates to: VQRPESEACLTC*GNNKEASAAGT
Trigger: TGTTCCAGCTGCACTGGCCTCCTTGTTATTCCCCAAACAAGTCAGACAGGCTTCTGACTCAGGTCTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS TCA 72 bp ACTAGCAAGTGCAAAGACCTGAGTCAGAAGCCTGTCTaGCTTGTTTGGGGAATAACAAGGAGGCCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: TSKCKDLSQKPV*LVWGITRRPVQ
Trigger: CTGCACTGGCCTCCTTGTTATTCCCCAAACAAGTCAGACAGGCTTCTGACTCAGGTCTTTGCACTTGCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS TCA 72 bp CTGGACAAAACACCAGCTCTTCTGAGACCTACATGGTaGGTCAGTGATACAGAAGATGACCTTTGCTTCGGG +
Preference number: 6 (lower is better)
Translates to: LDKTPALLRPTW*VSDTEDDLCFG
Trigger: CCCGAAGCAAAGGTCATCTTCTGTATCACTGACTCACCATGTAGGTCTCAGAAGAGCTGGTGTTTTGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS GCA 72 bp ATGCAAGTCTCGAACTTTTGCTGGGCCATTTATATCTaGCAGTTTGATGCACACCTGGCATACCAAGAGGCG +
Preference number: 6 (lower is better)
Translates to: MQVSNFCWAIYI*QFDAHLAYQEA
Trigger: CGCCTCTTGGTATGCCAGGTGTGCATCAAACTGGCAGATATAAATGGCCCAGCAAAAGTTCGAGACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CAA 90 bp CCTTGTGGTGGAAGGCTTGGATCAGTCAGAAGATCTGACACCATATaGCGAGCCTCATTTAGCACTGAAAGATCAACTCCATTTCCACCT +
Preference number: 6 (lower is better)
Translates to: PCGGRLGSVRRSDTI*RASFSTERSTPFPP
Trigger: AGGTGGAAATGGAGTTGATCTTTCAGTGCTAAATGAGGCTCGCAATATGGTGTCAGATCTTCTGACTGATCCAAGCCTTCCACCACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455098.2
CDS GCA 72 bp AATAGGAGAATAAGCTCACTCTTGGGAGATACTGCTTaGAACGGCTTCCCACACCTACTGCCACTTGAACAT +
Preference number: 6 (lower is better)
Translates to: NRRISSLLGDTA*NGFPHLLPLEH
Trigger: ATGTTCAAGTGGCAGTAGGTGTGGGAAGCCGTTGCAAGCAGTATCTCCCAAGAGTGAGCTTATTCTCCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532740.1
CDS CCA 72 bp TCAGAATCTGTTTCATTTCCTGTTCCACAACCATTGTaGATCTGCTGTAAGCCAGGAACTGGCCGTGTTGTC +
Preference number: 6 (lower is better)
Translates to: SESVSFPVPQPL*ICCKPGTGRVV
Trigger: GACAACACGGCCAGTTCCTGGCTTACAGCAGATCCACAATGGTTGTGGAACAGGAAATGAAACAGATTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CAA 90 bp ACTTGTGGTGGAAGGCTTGGATCAGTCAGAAGATCTGACACCATATaGCGAGCCTCATTTAGCACTGAAAGATCAACTCCATTTCCACCT +
Preference number: 6 (lower is better)
Translates to: TCGGRLGSVRRSDTI*RASFSTERSTPFPP
Trigger: AGGTGGAAATGGAGTTGATCTTTCAGTGCTAAATGAGGCTCGCAATATGGTGTCAGATCTTCTGACTGATCCAAGCCTTCCACCACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS TCA 72 bp TCTGTTCTCTGGAAATACAAGGCAACGACGGTCTCCTaGATATTTTGCAACTGCCATAGTAACTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SVLWKYKATTVS*IFCNCHSNWLQ
Trigger: CTGCAGCCAGTTACTATGGCAGTTGCAAAATATTCAGGAGACCGTCGTTGCCTTGTATTTCCAGAGAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000534317.1
CDS TCA 72 bp CTCGAACTTTTGCTGGGCCATTTATATCTGCCAGTTTaGTGCACACCTGGCATACCAAGAGGCGATCATTTT +
Preference number: 6 (lower is better)
Translates to: LELLLGHLYLPV*CTPGIPRGDHF
Trigger: AAAATGATCGCCTCTTGGTATGCCAGGTGTGCATCAAACTGGCAGATATAAATGGCCCAGCAAAAGTTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CCA 72 bp GATCGATTAGTTAGAGAGCCAGTAGACACTGGTCCATaGTTGGAAGAATTCACAGGACTCAGACTGGACAAA +
Preference number: 6 (lower is better)
Translates to: DRLVREPVDTGP*LEEFTGLRLDK
Trigger: TTTGTCCAGTCTGAGTCCTGTGAATTCTTCCAACCATGGACCAGTGTCTACTGGCTCTCTAACTAATCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS CAA 72 bp GGAAGGCTTGGATCAGTCAGAAGATCTGACACCATATaGCGAGCCTCATTTAGCACTGAAAGATCAACTCCA +
Preference number: 6 (lower is better)
Translates to: GRLGSVRRSDTI*RASFSTERSTP
Trigger: TGGAGTTGATCTTTCAGTGCTAAATGAGGCTCGCAATATGGTGTCAGATCTTCTGACTGATCCAAGCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CAA 90 bp TGCCAAATTCTTGGTGAGGTCTTTTGCCATTATTACGATCCCACCTaGAAGACTGTTCAACAGGTAGCAATCCTGAAGTTCCTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: CQILGEVFCHYYDPT*KTVQQVAILKFLSF
Trigger: GAAGCTCAGGAACTTCAGGATTGCTACCTGTTGAACAGTCTTCAAGGTGGGATCGTAATAATGGCAAAAGACCTCACCAAGAATTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS TCA 72 bp CCTCTACGATTTCCTTCCATATCTTGTGGTTTTCAGTaGGGTGGTGCATTAGCTGACAAAATATTCGCCGTC +
Preference number: 6 (lower is better)
Translates to: PLRFPSISCGFQ*GGALADKIFAV
Trigger: GACGGCGAATATTTTGTCAGCTAATGCACCACCTCACTGAAAACCACAAGATATGGAAGGAAATCGTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS GCA 72 bp GAAGGCTTGGATCAGTCAGAAGATCTGACACCATATTaGGAGCCTCATTTAGCACTGAAAGATCAACTCCAT +
Preference number: 6 (lower is better)
Translates to: EGLDQSEDLTPY*EPHLALKDQLH
Trigger: ATGGAGTTGATCTTTCAGTGCTAAATGAGGCTCGCAATATGGTGTCAGATCTTCTGACTGATCCAAGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS GCA 72 bp GCCTTCTGTCCATTTCAAATGCAAGTCTCGAACTTTTaGTGGGCCATTTATATCTGCCAGTTTGATGCACAC +
Preference number: 6 (lower is better)
Translates to: AFCPFQMQVSNF*WAIYICQFDAH
Trigger: GTGTGCATCAAACTGGCAGATATAAATGGCCCAGCAAAAGTTCGAGACTTGCATTTGAAATGGACAGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CCA 72 bp GTCCTCTATTTCAGAACAGGGGTAAAATCCAGGAAATaGTGTGAGAGGATTAATCTTTGGCCTACAGGAACC +
Preference number: 6 (lower is better)
Translates to: VLYFRTGVKSRK*CERINLWPTGT
Trigger: GGTTCCTGTAGGCCAAAGATTAATCCTCTCACACCATTTCCTGGATTTTACCCCTGTTCTGAAATAGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282096.9
CDS CCA 72 bp TTCTGTCCATTTCAAATGCAAGTCTCGAACTTTTGCTaGGCCATTTATATCTGCCAGTTTGATGCACACCTG +
Preference number: 6 (lower is better)
Translates to: FCPFQMQVSNFC*AIYICQFDAHL
Trigger: CAGGTGTGCATCAAACTGGCAGATATAAATGGCCCAGCAAAAGTTCGAGACTTGCATTTGAAATGGACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CCA 72 bp TTAAGAGGCTTGCCTAATTTTCCAGCTAAGAGGGACTaGTTTGTATCAGACCAACTCTTCTGTCTAGAACAA +
Preference number: 6 (lower is better)
Translates to: LRGLPNFPAKRD*FVSDQLFCLEQ
Trigger: TTGTTCTAGACAGAAGAGTTGGTCTGATACAAACCAGTCCCTCTTAGCTGGAAAATTAGGCAAGCCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CAA 90 bp CACCTGATTTTCCACTGCAGCAATCTGTACCATCTGATTCAGATGTaGAAACATATTTCAGCATTTGATGTCCACAGCTGTTACACAGAT +
Preference number: 6 (lower is better)
Translates to: HLIFHCSNLYHLIQM*KHISAFDVHSCYTD
Trigger: ATCTGTGTAACAGCTGTGGACATCAAATGCTGAAATATGTTTCAACATCTGAATCAGATGGTACAGATTGCTGCAGTGGAAAATCAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282096.9
ENST00000455098.2
CDS CAA 90 bp AAGACAAAGACAGAGAAGTACAAGAGAGTAAGGGAGGGAACCATGTaGTGTAAGTTCTTTTACGTACATGACAAAGACTTTTACACTGGG +
Preference number: 6 (lower is better)
Translates to: KTKTEKYKRVREGTM*CKFFYVHDKDFYTG
Trigger: CCCAGTGTAAAAGTCTTTGTCATGTACGTAAAAGAACTTACACAACATGGTTCCCTCCCTTACTCTCTTGTACTTCTCTGTCTTTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS GCA 72 bp CTTGACTTGAAATGCCAAATTCTTGGTGAGGTCTTTTaGCATTATTACGATCCCACCTTGAAGACTGTTCAA +
Preference number: 6 (lower is better)
Translates to: LDLKCQILGEVF*HYYDPTLKTVQ
Trigger: TTGAACAGTCTTCAAGGTGGGATCGTAATAATGGCAAAAGACCTCACCAAGAATTTGGCATTTCAAGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS GCA 72 bp AAATCTGGAGTATTAGGTGCATTGCCCAGAGATCTCTaGAAGATAACGCTTGGCTTATTAAGAAAATCAGCA +
Preference number: 6 (lower is better)
Translates to: KSGVLGALPRDL*KITLGLLRKSA
Trigger: TGCTGATTTTCTTAATAAGCCAAGCGTTATCTTGCAGAGATCTCTGGGCAATGCACCTAATACTCCAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS GCA 72 bp ATTTCTAAGTTGCTGATAAAAATCTGGAGTATTAGGTaGATTGCCCAGAGATCTCTGCAAGATAACGCTTGG +
Preference number: 6 (lower is better)
Translates to: ISKLLIKIWSIR*IAQRSLQDNAW
Trigger: CCAAGCGTTATCTTGCAGAGATCTCTGGGCAATGCACCTAATACTCCAGATTTTTATCAGCAACTTAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS CCA 72 bp GGATTTATCTTTGGGGATATAGGTAATGACTGGAATTaGGCATATGTGAGGCTTCTGAGATACTGGAAACAT +
Preference number: 6 (lower is better)
Translates to: GFIFGDIGNDWN*AYVRLLRYWKH
Trigger: ATGTTTCCAGTATCTCAGAAGCCTCACATATGCCCAATTCCAGTCATTACCTATATCCCCAAAGATAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CAA 90 bp TTGATGTCCACAGCTGTTACACAGATTGCTATCAGAATTTCTAAGTaGCTGATAAAAATCTGGAGTATTAGGTGCATTGCCCAGAGATCT +
Preference number: 6 (lower is better)
Translates to: LMSTAVTQIAIRISK*LIKIWSIRCIAQRS
Trigger: AGATCTCTGGGCAATGCACCTAATACTCCAGATTTTTATCAGCAACTTAGAAATTCTGATAGCAATCTGTGTAACAGCTGTGGACATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS CAA 72 bp ACAGAGAAGTACAAGAGAGTAAGGGAGGGAACCATGTaGTGTAAGTTCTTTTACGTACATGACAAAGACTTT +
Preference number: 6 (lower is better)
Translates to: TEKYKRVREGTM*CKFFYVHDKDF
Trigger: AAAGTCTTTGTCATGTACGTAAAAGAACTTACACAACATGGTTCCCTCCCTTACTCTCTTGTACTTCTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534317.1
CDS CCA 72 bp ATTGCTATCAGAATTTCTAAGTTGCTGATAAAAATCTaGAGTATTAGGTGCATTGCCCAGAGATCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: IAIRISKLLIKI*SIRCIAQRSLQ
Trigger: TTGCAGAGATCTCTGGGCAATGCACCTAATACTCCAGATTTTTATCAGCAACTTAGAAATTCTGATAGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS CAA 72 bp ACAGCTGTTACACAGATTGCTATCAGAATTTCTAAGTaGCTGATAAAAATCTGGAGTATTAGGTGCATTGCC +
Preference number: 6 (lower is better)
Translates to: TAVTQIAIRISK*LIKIWSIRCIA
Trigger: GGCAATGCACCTAATACTCCAGATTTTTATCAGCAACTTAGAAATTCTGATAGCAATCTGTGTAACAGCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282096.9
ENST00000455098.2
ENST00000525439.1
CDS TCA 72 bp CCTTGGACCTATCAGTATATGATGAATGGAATCCCTTaGCCTATCATATACTGTAAAGAATCAATGTTGGAA +
Preference number: 6 (lower is better)
Translates to: PWTYQYMMNGIP*PIIYCKESMLE
Trigger: TTCCAACATTGATTCTTTACAGTATATGATAGGTCAAGGGATTCCATTCATCATATACTGATAGGTCCAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532740.1
CDS TCA 72 bp GGTAACCGTGATACCAATATAATGCCAAGAACATTATaGAAAGTAAGAATTTATAGGCCAACACTCTCTCAT +
Preference number: 6 (lower is better)
Translates to: GNRDTNIMPRTL*KVRIYRPTLSH
Trigger: ATGAGAGAGTGTTGGCCTATAAATTCTTACTTTTCATAATGTTCTTGGCATTATATTGGTATCACGGTTACC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534317.1