RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE3A (Homo sapiens)

Ensembl gene IDs: ENSG00000172572

Ensembl transcript IDs: ENST00000359062.4, ENST00000542675.1, ENST00000544307.1

Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCCGGCCAGAAGAAGCATGACTGACAATGGGCCAGACTGCCGATaGAAGCTACCCCAACAAACAGCGTGTGGAACACCACAACAGGGG +
Preference number: 1 (lower is better)
Translates to: SPARRSMTDNGPDCR*KLPQQTACGTPQQG
Trigger: CCCCTGTTGTGGTGTTCCACACGCTGTTTGTTGGGGTAGCTTCCATCGGCAGTCTGGCCCATTGTCAGTCATGCTTCTTCTGGCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 90 bp ATAATCTCCCCGGCCAGAAGAAGCATGACTGACAATGGGCCAGACTaGCGATGGAAGCTACCCCAACAAACAGCGTGTGGAACACCACAA +
Preference number: 1 (lower is better)
Translates to: IISPARRSMTDNGPD*RWKLPQQTACGTPQ
Trigger: TTGTGGTGTTCCACACGCTGTTTGTTGGGGTAGCTTCCATCGGCAGTCTGGCCCATTGTCAGTCATGCTTCTTCTGGCCGGGGAGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 90 bp GAGCTCCTTCAAGTGGTGCATAGCAGTAATGTAATACCAAACACGTaGCCCTCTCACCCAGCCCTTGAGTGCCCTCCATCAGCAAAAGGC +
Preference number: 1 (lower is better)
Translates to: ELLQVVHSSNVIPNT*PSHPALECPPSAKG
Trigger: GCCTTTTGCTGATGGAGGGCACTCAAGGGCTGGGTGAGAGGGCCACGTGTTTGGTATTACATTACTGCTATGCACCACTTGAAGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR TCA 90 bp TTCAAACAATCTCTCTATAATCTCCCCGGCCAGAAGAAGCATGACTaGCAATGGGCCAGACTGCCGATGGAAGCTACCCCAACAAACAGC +
Preference number: 1 (lower is better)
Translates to: FKQSLYNLPGQKKHD*QWARLPMEATPTNS
Trigger: GCTGTTTGTTGGGGTAGCTTCCATCGGCAGTCTGGCCCATTGTCAGTCATGCTTCTTCTGGCCGGGGAGATTATAGAGAGATTGTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 90 bp AGTAATGTAATACCAAACACGTGGCCCTCTCACCCAGCCCTTGAGTaGCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGA +
Preference number: 1 (lower is better)
Translates to: SNVIPNTWPSHPALE*PPSAKGPLLKLNGG
Trigger: TCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAGGGCTGGGTGAGAGGGCCACGTGTTTGGTATTACATTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR TCA 90 bp CCACTAGTTGGACTATACAGCTTTGATGAAACTGTCAATAGACTGTaGTGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATA +
Preference number: 1 (lower is better)
Translates to: PLVGLYSFDETVNRL*WTSNCPASPLTPNI
Trigger: TATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGTCTATTGACAGTTTCATCAAAGCTGTATAGTCCAACTAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR TCA 90 bp AAAGGGGGAGAACTCTACTGGCAGAAAATGTCCCTTAGCATCCTTTaGGATGTACTGGGTGTGTATGAAAGTCACAAACTTAGTGGATCT +
Preference number: 1 (lower is better)
Translates to: KGGELYWQKMSLSIL*DVLGVYESHKLSGS
Trigger: AGATCCACTAAGTTTGTGACTTTCATACACACCCAGTACATCTCAAAGGATGCTAAGGGACATTTTCTGCCAGTAGAGTTCTCCCCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 90 bp TCCATACTCATAGACAGTTCCTATACATTCATTAGGCAAGTAGACTaGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCT +
Preference number: 1 (lower is better)
Translates to: SILIDSSYTFIRQVD*KMPQSFGFEAGDRA
Trigger: AGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCAGTCTACTTGCCTAATGAATGTATAGGAACTGTCTATGAGTATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 90 bp CTAAATTGGTTTGTATTAAAGACTGAGGGGTGTCCTGGGATACCCTaGAAATTTTATGTAGTGTTCACTCCCAATCCACAGCTCTGCATT +
Preference number: 1 (lower is better)
Translates to: LNWFVLKTEGCPGIP*KFYVVFTPNPQLCI
Trigger: AATGCAGAGCTGTGGATTGGGAGTGAACACTACATAAAATTTGCAGGGTATCCCAGGACACCCCTCAGTCTTTAATACAAACCAATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 90 bp GGCAATAGCACACATTGCCTAACATCCATGGTGCATAACATAGACTaGAAAATATGTTACCATTCTCTGAGCATGGGTCTTTGGTGTGAA +
Preference number: 1 (lower is better)
Translates to: GNSTHCLTSMVHNID*KICYHSLSMGLWCE
Trigger: TTCACACCAAAGACCCATGCTCAGAGAATGGTAACATATTTTCCAGTCTATGTTATGCACCATGGATGTTAGGCAATGTGTGCTATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR TCA 90 bp CCATCTCAAATTTCTACAGTGTTGTGTCTAAATGTTGTGCTGGCTTaGAGAGAGTCTTTGACAAGTCAATCTGTTTGGAAACACAGCCCA +
Preference number: 1 (lower is better)
Translates to: PSQISTVLCLNVVLA*RESLTSQSVWKHSP
Trigger: TGGGCTGTGTTTCCAAACAGATTGACTTGTCAAAGACTCTCTTCAAGCCAGCACAACATTTAGACACAACACTGTAGAAATTTGAGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 90 bp AATAATGCTCTGGAACTTTCATCCCTCAGTACTAAGAGCAAAAGCTaGTTAGTTGGTAACCTACATTTCCTGCACTGTTTCCTTGCTAAG +
Preference number: 1 (lower is better)
Translates to: NNALELSSLSTKSKS*LVGNLHFLHCFLAK
Trigger: CTTAGCAAGGAAACAGTGCAGGAAATGTAGGTTACCAACTAAGCAGCTTTTGCTCTTAGTACTGAGGGATGAAAGTTCCAGAGCATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 90 bp AACTCTACTGGCAGAAAATGTCCCTTAGCATCCTTTGAGATGTACTaGGTGTGTATGAAAGTCACAAACTTAGTGGATCTTCATCCCTTT +
Preference number: 1 (lower is better)
Translates to: NSTGRKCPLASFEMY*VCMKVTNLVDLHPF
Trigger: AAAGGGATGAAGATCCACTAAGTTTGTGACTTTCATACACACCCAGTACATCTCAAAGGATGCTAAGGGACATTTTCTGCCAGTAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 90 bp CACTCAGAATACACCTGGTCTCTTACTTTATTTAACAGAGAACCATaGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTA +
Preference number: 1 (lower is better)
Translates to: HSEYTWSLTLFNREP*HPGNQFQLFLPLIL
Trigger: TAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGGTTCTCTGTTAAATAAAGTAAGAGACCAGGTGTATTCTGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 90 bp AATATACACACAAAATGCGAAGAATCCCAAAATGCAATAGCCATTTaGCCATCTCAAATTTCTACAGTGTTGTGTCTAAATGTTGTGCTG +
Preference number: 1 (lower is better)
Translates to: NIHTKCEESQNAIAI*PSQISTVLCLNVVL
Trigger: CAGCACAACATTTAGACACAACACTGTAGAAATTTGAGATGGGCAAATGGCTATTGCATTTTGGGATTCTTCGCATTTTGTGTGTATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 90 bp AAGAAATATCAGGGGGTGGGTGGGTTCAGTGATATTTATTACCAGTaGTTATCAACTAACAGATTGTTCTTGTTGGAACAAAAATGGTAT +
Preference number: 1 (lower is better)
Translates to: KKYQGVGGFSDIYYQ*LSTNRLFLLEQKWY
Trigger: ATACCATTTTTGTTCCAACAAGAACAATCTGTTAGTTGATAAGCACTGGTAATAAATATCACTGAACCCACCCACCCCCTGATATTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 90 bp TCCAGAGTGAACTTCCTTCTGTTTGTTCACATGTATTCAGTCATTTaGTACAGCTATTCTGAGTTACTTAAACCACAAAAATCTCTTTAC +
Preference number: 1 (lower is better)
Translates to: SRVNFLLFVHMYSVI*YSYSELLKPQKSLY
Trigger: GTAAAGAGATTTTTGTGGTTTAAGTAACTCAGAATAGCTGTAGCAAATGACTGAATACATGTGAACAAACAGAAGGAAGTTCACTCTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCCTCTCACCCAGCCCTTaGGTGCCCTCCATCAGCAAA +
Preference number: 2 (lower is better)
Translates to: TGVVSGTFTPERQTTTVALSPSP*VPSISK
Trigger: TTTGCTGATGGAGGGCACTCAAGGGCTGGGTGAGAG...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 90 bp TCTCACCCAGCCCTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATaGAAGCTAAATGGAGGAGGGCATTTGGAATGGCTGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: SHPALECPPSAKGPL*KLNGGGHLEWLPPK
Trigger: TTTGGGAGGCAGCCATTCCAAATGCCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAGGGCTGGGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCGTGCGTGCATGGGTGTaGATATGTTTTACATGTATC +
Preference number: 2 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAVRAWV*ICFTCI
Trigger: GATACATGTAAAACATATTCACACCCATGCACGCAC...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTAATGTTGTGCTGGCTTaGAGAGAGTCTTTGACAAGT +
Preference number: 2 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSNVVLA*RESLTS
Trigger: ACTTGTCAAAGACTCTCTTCAAGCCAGCACAACATT...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTCACAGGCTATCACGCTaGAGTACAATTTCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: TSNCPASPLTPNIALCSIHRLSR*STISQA
Trigger: GGCTTGGGAAATTGTACTTCAGCGTGATAGCCTGTG...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCGGCCAGAAGAAGCATaGCTGACAATGGGCCAGACT +
Preference number: 2 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFRPEEA*LTMGQT
Trigger: AGTCTGGCCCATTGTCAGTCATGCTTCTTCTGGCCG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCACAAAAACCCTGTGTTaGAATATTCTCCTTCATCTC +
Preference number: 2 (lower is better)
Translates to: TGVVSGTFTPERQTTTVATKTLC*NILLHL
Trigger: GAGATGAAGGAGAATATTTCAACACAGGGTTTTTGT...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR GCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATGGCATTTGGAATGGCTaGCTCCCAAAGACACTCCAG +
Preference number: 2 (lower is better)
Translates to: HKRPRTMVIKCVAACSINGIWNG*LPKTLQ
Trigger: CTGGAGTGTCTTTGGGAGGCAGCCATTCCAAATGCC...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGGAGGGCATTTGGAATaGCTGCCTCCCAAAGACACT +
Preference number: 2 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFGGHLE*LPPKDT
Trigger: AGTGTCTTTGGGAGGCAGCCATTCCAAATGCCCTCC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATATGGAGGAGGGCATTTaGAATGGCTGCCTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: HKRPRTMVIKCVAACSINMEEGI*NGCLPK
Trigger: CTTTGGGAGGCAGCCATTCCAAATGCCCTCCTCCAT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGTAATACCAAACACGTaGCCCTCTCACCCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFVIPNT*PSHPAL
Trigger: AAGGGCTGGGTGAGAGGGCCACGTGTTTGGTATTAC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTAACCAGGCAGTTTGCTaGGACTTCCACCATAGTAGC +
Preference number: 2 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFNQAVC*DFHHSS
Trigger: GCTACTATGGTGGAAGTCTCAGCAAACTGCCTGGTT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR GCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCCACCCAGCCCTTGAGTaGCCTCCATCAGCAAAAGGC +
Preference number: 2 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFHPALE*PPSAKG
Trigger: GCCTTTTGCTGATGGAGGGCACTCAAGGGCTGGGTG...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATTGGAGCCAGCAATCGTaGCCTTCAGTGTGTATGTGT +
Preference number: 2 (lower is better)
Translates to: HKRPRTMVIKCVAACSINWSQQS*PSVCMC
Trigger: ACACATACACACTGAAGGCCACGATTGCTGGCTCCA...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 90 bp CACACACACACACACACACACACACACACACACACACACACAGTGTaGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCAT +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTHTHTHTV*AGCIRIQIMLWNFH
Trigger: ATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR GCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTACTAAGAGCAAAAGCTaGTTAGTTGGTAACCTACAT +
Preference number: 2 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSTKSKS*LVGNLH
Trigger: ATGTAGGTTACCAACTAAGCAGCTTTTGCTCTTAGT...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTACACACACACAGTGTTaGCAGGATGTATCAGAATTC +
Preference number: 2 (lower is better)
Translates to: TSNCPASPLTPNIALCSITHTQC*QDVSEF
Trigger: GAATTCTGATACATCCTGCCAACACTGTGTGTGTGT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGGGCCAGACTGCCGATaGAAGCTACCCCAACAAACA +
Preference number: 2 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFGPDCR*KLPQQT
Trigger: TGTTTGTTGGGGTAGCTTCCATCGGCAGTCTGGCCC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 90 bp CCCATCTCAAATTTCTACAGTGTTGTGTCTAAATGTTGTGCTGGCTaGAAGAGAGTCTTTGACAAGTCAATCTGTTTGGAAACACAGCCC +
Preference number: 2 (lower is better)
Translates to: PISNFYSVVSKCCAG*KRVFDKSICLETQP
Trigger: GGGCTGTGTTTCCAAACAGATTGACTTGTCAAAGACTCTCTTCAAGCCAGCACAACATTTAGACACAACACTGTAGAAATTTGAGATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTTCATCATTCTCTTACTaGGCTTGGAGAGAACTACAA +
Preference number: 2 (lower is better)
Translates to: TSNCPASPLTPNIALCSISSFSY*AWRELQ
Trigger: TTGTAGTTCTCTCCAAGCCCAGTAAGAGAATGATGA...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATAAAGACACTCCAGAGTaGACTTCCTTCTGTTTGTTC +
Preference number: 2 (lower is better)
Translates to: HKRPRTMVIKCVAACSINKDTPE*TSFCLF
Trigger: GAACAAACAGAAGGAAGTTCACTCTGGAGTGTCTTT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTTTTATTGAAGCTAAATaGAGGAGGGCATTTGGAATG +
Preference number: 2 (lower is better)
Translates to: TSNCPASPLTPNIALCSIFIEAK*RRAFGM
Trigger: CATTCCAAATGCCCTCCTCCATTTAGCTTCAATAAA...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGAAAAGGTAGATGATTaGTTGTCCATCGACCTCCAT +
Preference number: 2 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFEKVDD*LSIDLH
Trigger: ATGGAGGTCGATGGACAACCAATCATCTACCTTTTC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATCTTGAAGAGAGTCTTTaGCAAGTCAATCTGTTTGGA +
Preference number: 2 (lower is better)
Translates to: HKRPRTMVIKCVAACSINLEESL*QVNLFG
Trigger: TCCAAACAGATTGACTTGTCAAAGACTCTCTTCAAG...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCTGGGACCTTCACCCCTaGAAGACAAACTACAACAGT +
Preference number: 2 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFWDLHP*KTNYNS
Trigger: ACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCA...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR TCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATATTAGAAAAGGTAGATaGTTGGTTGTCCATCGACCT +
Preference number: 2 (lower is better)
Translates to: HKRPRTMVIKCVAACSINIRKGR*LVVHRP
Trigger: AGGTCGATGGACAACCAATCATCTACCTTTTCTAAT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR GCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCTTAGAAGCTGGTGTTaGAATGTGAAAGCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFLRSWC*NVKASL
Trigger: CAAAGAAGCTTTCACATTGCAACACCAGCTTCTAAG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTATTCAAATAATGCTCTaGAACTTTCATCCCTCAGTA +
Preference number: 2 (lower is better)
Translates to: TSNCPASPLTPNIALCSIIQIML*NFHPSV
Trigger: TACTGAGGGATGAAAGTTCCAGAGCATTATTTGAAT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTTTCATCTGGGAGATATaGACCCAGAATTCATTCAGT +
Preference number: 2 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFFIWEI*TQNSFS
Trigger: ACTGAATGAATTCTGGGTCCATATCTCCCAGATGAA...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTACAAGTCAATCTGTTTaGAAACACAGCCCATTCTAT +
Preference number: 2 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFTSQSV*KHSPFY
Trigger: ATAGAATGGGCTGTGTTTCCAAACAGATTGACTTGT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR GCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGTAACCTACATTTCCTaGACTGTTTCCTTGCTAAGC +
Preference number: 2 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFVTYIS*TVSLLS
Trigger: GCTTAGCAAGGAAACAGTGCAGGAAATGTAGGTTAC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 90 bp TTCCTGCACTGTTTCCTTGCTAAGCCACACCATCTCCTTTGTGATTaGGTTTCCTTTATGATTTATTATATCACAGTGACCACTATATAT +
Preference number: 2 (lower is better)
Translates to: FLHCFLAKPHHLLCD*VSFMIYYITVTTIY
Trigger: ATATATAGTGGTCACTGTGATATAATAAATCATAAAGGAAACCAAATCACAAAGGAGATGGTGTGGCTTAGCAAGGAAACAGTGCAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 90 bp ACTGTATTTTATGGTCTTACCTACACTGATACTAGGTCAGTATTTTaGAATCAGCAGGTAAACACTGATTTCCACTATGGAAATGAAGCC +
Preference number: 2 (lower is better)
Translates to: TVFYGLTYTDTRSVF*NQQVNTDFHYGNEA
Trigger: GGCTTCATTTCCATAGTGGAAATCAGTGTTTACCTGCTGATTCAAAAATACTGACCTAGTATCAGTGTAGGTAAGACCATAAAATACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR GCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCACAAACTACAACAGTTaGCAAGAATCAGGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFTNYNS*QESGFS
Trigger: GGAAAAGCCTGATTCTTGGCAACTGTTGTAGTTTGT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 90 bp GGTGGGTTCAGTGATATTTATTACCAGTGCTTATCAACTAACAGATaGTTCTTGTTGGAACAAAAATGGTATGCATTCTTCTGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: GGFSDIYYQCLSTNR*FLLEQKWYAFFCEN
Trigger: ATTCTCACAGAAGAATGCATACCATTTTTGTTCCAACAAGAACAATCTGTTAGTTGATAAGCACTGGTAATAAATATCACTGAACCCACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR GCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCAATGCAATAGCCATTTaGCCATCTCAAATTTCTACA +
Preference number: 2 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFNAIAI*PSQIST
Trigger: TGTAGAAATTTGAGATGGGCAAATGGCTATTGCATT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCATCTTTTTCCCTAAGTaGGCTAGAAACTCTTTCATT +
Preference number: 2 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFIFFPK*ARNSFI
Trigger: AATGAAAGAGTTTCTAGCCCACTTAGGGAAAAAGAT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 72 bp CCGGCCAGAAGAAGCATGACTGACAATGGGCCAGACTaGCGATGGAAGCTACCCCAACAAACAGCGTGTGGA +
Preference number: 3 (lower is better)
Translates to: PARRSMTDNGPD*RWKLPQQTACG
Trigger: TCCACACGCTGTTTGTTGGGGTAGCTTCCATCGGCAGTCTGGCCCATTGTCAGTCATGCTTCTTCTGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 72 bp AGACTGCCGATGGAAGCTACCCCAACAAACAGCGTGTaGAACACCACAACAGGGGTTGTCAGTGGGACCTTC +
Preference number: 3 (lower is better)
Translates to: RLPMEATPTNSV*NTTTGVVSGTF
Trigger: GAAGGTCCCACTGACAACCCCTGTTGTGGTGTTCCACACGCTGTTTGTTGGGGTAGCTTCCATCGGCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR TCA 72 bp TCTCTCTATAATCTCCCCGGCCAGAAGAAGCATGACTaGCAATGGGCCAGACTGCCGATGGAAGCTACCCCA +
Preference number: 3 (lower is better)
Translates to: SLYNLPGQKKHD*QWARLPMEATP
Trigger: TGGGGTAGCTTCCATCGGCAGTCTGGCCCATTGTCAGTCATGCTTCTTCTGGCCGGGGAGATTATAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTCCTCTCACCCAGCCCTaGAGTGCCCTCCATCAGCAA +
Preference number: 3 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSPLTQP*SALHQQ
Trigger: TTGCTGATGGAGGGCACTCAAGGGCTGGGTGAGAGG...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 72 bp ATACCAAACACGTGGCCCTCTCACCCAGCCCTTGAGTaGCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTA +
Preference number: 3 (lower is better)
Translates to: IPNTWPSHPALE*PPSAKGPLLKL
Trigger: TAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAGGGCTGGGTGAGAGGGCCACGTGTTTGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 72 bp AGAAGAAGCATGACTGACAATGGGCCAGACTGCCGATaGAAGCTACCCCAACAAACAGCGTGTGGAACACCA +
Preference number: 3 (lower is better)
Translates to: RRSMTDNGPDCR*KLPQQTACGTP
Trigger: TGGTGTTCCACACGCTGTTTGTTGGGGTAGCTTCCATCGGCAGTCTGGCCCATTGTCAGTCATGCTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR TCA 72 bp TGTAATACCAAACACGTGGCCCTCTCACCCAGCCCTTaGGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAA +
Preference number: 3 (lower is better)
Translates to: CNTKHVALSPSP*VPSISKRPFIE
Trigger: TTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAGGGCTGGGTGAGAGGGCCACGTGTTTGGTATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATACACCACAACAGGGGTaGTCAGTGGGACCTTCACCC +
Preference number: 3 (lower is better)
Translates to: HKRPRTMVIKCVAACSINTPQQG*SVGPSP
Trigger: GGGTGAAGGTCCCACTGACAACCCCTGTTGTGGTGT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTAAATGTTGTGCTGGCTaGAAGAGAGTCTTTGACAAG +
Preference number: 3 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSKCCAG*KRVFDK
Trigger: CTTGTCAAAGACTCTCTTCAAGCCAGCACAACATTT...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATCTCAGTCTTTCGGGTTaGAGGCTGGTGATAGAGCTC +
Preference number: 3 (lower is better)
Translates to: HKRPRTMVIKCVAACSINLSLSG*RLVIEL
Trigger: GAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAG...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATTCTCTTACTGGGCTaGGAGAGAACTACAATGTAT +
Preference number: 3 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSILLLG*ERTTMY
Trigger: ATACATTGTAGTTCTCTCCAAGCCCAGTAAGAGAAT...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR TCA 72 bp GGACTATACAGCTTTGATGAAACTGTCAATAGACTGTaGTGGACTTCCAACTGTCCTGCCAGTCCACTCACT +
Preference number: 3 (lower is better)
Translates to: GLYSFDETVNRL*WTSNCPASPLT
Trigger: AGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGTCTATTGACAGTTTCATCAAAGCTGTATAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTAAATGCAATAGCCATTaGCCCATCTCAAATTTCTAC +
Preference number: 3 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSKCNSH*PISNFY
Trigger: GTAGAAATTTGAGATGGGCAAATGGCTATTGCATTT...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTATAAATGTTACTAAATaGTGGAGCCAGCAATCGTGG +
Preference number: 3 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSINVTK*WSQQSW
Trigger: CCACGATTGCTGGCTCCACAATTTAGTAACATTTAT...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTGACAAGTCAATCTGTTaGGAAACACAGCCCATTCTA +
Preference number: 3 (lower is better)
Translates to: TSNCPASPLTPNIALCSIDKSIC*ETQPIL
Trigger: TAGAATGGGCTGTGTTTCCAAACAGATTGACTTGTC...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR TCA 72 bp GTCAGGAAAGGCATTAAACTAGAATCAGGGTTAGGATaGCAGAAGAGGACAAGACCCTTATTGAGGTTTCCA +
Preference number: 3 (lower is better)
Translates to: VRKGIKLESGLG*QKRTRPLLRFP
Trigger: TGGAAACCTCAATAAGGGTCTTGTCCTCTTCTGTCATCCTAACCCTGATTCTAGTTTAATGCCTTTCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 72 bp CTGGAACTTTCATCCCTCAGTACTAAGAGCAAAAGCTaGTTAGTTGGTAACCTACATTTCCTGCACTGTTTC +
Preference number: 3 (lower is better)
Translates to: LELSSLSTKSKS*LVGNLHFLHCF
Trigger: GAAACAGTGCAGGAAATGTAGGTTACCAACTAAGCAGCTTTTGCTCTTAGTACTGAGGGATGAAAGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 72 bp TTTGTATTAAAGACTGAGGGGTGTCCTGGGATACCCTaGAAATTTTATGTAGTGTTCACTCCCAATCCACAG +
Preference number: 3 (lower is better)
Translates to: FVLKTEGCPGIP*KFYVVFTPNPQ
Trigger: CTGTGGATTGGGAGTGAACACTACATAAAATTTGCAGGGTATCCCAGGACACCCCTCAGTCTTTAATACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 72 bp ACCTACTATCTGATCATGCTGGGCAGATTAATGCAGTaGCTGTTGTTTATTGACTGGTCAGTGTTTCATCTG +
Preference number: 3 (lower is better)
Translates to: TYYLIMLGRLMQ*LLFIDWSVFHL
Trigger: CAGATGAAACACTGACCAGTCAATAAACAACAGCCACTGCATTAATCTGCCCAGCATGATCAGATAGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR TCA 72 bp GAACTCTACTGGCAGAAAATGTCCCTTAGCATCCTTTaGGATGTACTGGGTGTGTATGAAAGTCACAAACTT +
Preference number: 3 (lower is better)
Translates to: ELYWQKMSLSIL*DVLGVYESHKL
Trigger: AAGTTTGTGACTTTCATACACACCCAGTACATCTCAAAGGATGCTAAGGGACATTTTCTGCCAGTAGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 72 bp GGCAGAAAATGTCCCTTAGCATCCTTTGAGATGTACTaGGTGTGTATGAAAGTCACAAACTTAGTGGATCTT +
Preference number: 3 (lower is better)
Translates to: GRKCPLASFEMY*VCMKVTNLVDL
Trigger: AAGATCCACTAAGTTTGTGACTTTCATACACACCCAGTACATCTCAAAGGATGCTAAGGGACATTTTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 72 bp TACACCTGGTCTCTTACTTTATTTAACAGAGAACCATaGCATCCAGGTAACCAGTTCCAACTTTTCCTACCA +
Preference number: 3 (lower is better)
Translates to: YTWSLTLFNREP*HPGNQFQLFLP
Trigger: TGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGGTTCTCTGTTAAATAAAGTAAGAGACCAGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATGACAAACTACAACAGTaGCCAAGAATCAGGCTTTTC +
Preference number: 3 (lower is better)
Translates to: HKRPRTMVIKCVAACSINDKLQQ*PRIRLF
Trigger: GAAAAGCCTGATTCTTGGCAACTGTTGTAGTTTGTC...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 72 bp TTCTGTTGGGAAGAGGTAATGACTGGTCAGAACAAATaGCCGCAGAAATCAGAGCACATTTTAATACCAAAA +
Preference number: 3 (lower is better)
Translates to: FCWEEVMTGQNK*PQKSEHILIPK
Trigger: TTTTGGTATTAAAATGTGCTCTGATTTCTGCGGGCATTTGTTCTGACCAGTCATTACCTCTTCCCAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 72 bp GTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTaGAACTTTCATCCCTCAGTACTAAGAGCAAAAGCT +
Preference number: 3 (lower is better)
Translates to: VLAGCIRIQIML*NFHPSVLRAKA
Trigger: AGCTTTTGCTCTTAGTACTGAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR-3UTR CAA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCAAATTTCTACAGTGTaGTGTCTAAATGTTGTGCTG +
Preference number: 3 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFQISTV*CLNVVL
Trigger: CAGCACAACATTTAGACACAACACTGTAGAAATTTG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR GCA 72 bp TTTCAACAAATACCATGTGTTGGCAATAGCACACATTaGCTAACATCCATGGTGCATAACATAGACTGGAAA +
Preference number: 3 (lower is better)
Translates to: FQQIPCVGNSTH*LTSMVHNIDWK
Trigger: TTTCCAGTCTATGTTATGCACCATGGATGTTAGGCAATGTGTGCTATTGCCAACACATGGTATTTGTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CCA 72 bp TTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCTaGTATTCAACCAAAATAGACAGAATCGGGAATTCT +
Preference number: 3 (lower is better)
Translates to: FVLLGLQRKDLF*YSTKIDRIGNS
Trigger: AGAATTCCCGATTCTGTCTATTTTGGTTGAATACCAGAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGGGACGGGCTTGTCCCTaGCTCGTGCAGCGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGGRACP*LVQRRR
Trigger: CCGGCGACGCTGCACGAGTCAGGGACAAGCCCGTCC...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGCGGGCCCGCGGCAGATaGAGGTCTCCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGRARGR*RSPFSS
Trigger: GGAGGAGAAGGGAGACCTCCATCTGCCGCGGGCCCG...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCGGGAGTGAGAGTAAGTaGTCCTCCCCGACGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAGSESK*SSPTPS
Trigger: GCTGGGCGTCGGGGAGGATCACTTACTCTCACTCCC...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTGAAGACGCCCCCTTCTaGTCCCGGGGCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSEDAPF*SRGCFL
Trigger: GAGGAAGCAGCCCCGGGAGCAGAAGGGGGCGTCTTC...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTCCCCAAATGCTCCCTTaGAGCCGCCTCCGCGGACTG +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSPQMLP*SRLRGL
Trigger: CAGTCCGCGGAGGCGGCTCCAAGGGAGCATTTGGGG...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCAGGTGGGTAGACCTGTaGCCGAGGTGGTGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVARWVDL*PRWWWS
Trigger: GGACCACCACCACCTCGGCCACAGGTCTACCCACCT...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGAGGCACACAGGAGACTaGAGAGCAGCGCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGRHTGD*RAAPRA
Trigger: AGCCCTCGGCGCTGCTCTTCAGTCTCCTGTGTGCCT...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTCGAGTCCCGCGGCGATaGGGGGTCCGCACGATGGTG +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIRVPRR*GVRTMV
Trigger: CACCATCGTGCGGACCCCGCATCGCCGCGGGACTCG...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGGATGGGACTTGCTGCTaGAGCCGGACATCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGDGTCC*SRTSRR
Trigger: CCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATC...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTTCGGTAATGAGGCCGTaGGCCTCGCCCATGACGGCG +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSSVMRP*ASPMTA
Trigger: CGCCGTCATGGGCGAGGCCCACGGCCTCATTACCGA...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCGACCTGTGGCCGAGGTaGTGGTGGTCCAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVADLWPR*WWSKWK
Trigger: CTTCCACTTGGACCACCACCACCTCGGCCACAGGTC...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCTCTGAAGAGTGCGACTaGGGGGTCTGGTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVASEECD*GVWSRD
Trigger: ATCCCTGGACCAGACCCCTCAGTCGCACTCTTCAGA...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTTCCGATGGGACTTGCTaGTGCAGCCGGACATCTCGG +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSSDGTC*CSRTSR
Trigger: CCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGA...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGCGCCGGGCACTGCCATaGTATAGGGTGCCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGRRALP*YRVPSS
Trigger: TGAAGAGGGCACCCTATACCATGGCAGTGCCCGGCG...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGGGTCCGCACGATGGTaGCAGTCCCGGCCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFGSARW*QSRPAV
Trigger: CACGGCGGGCCGGGACTGCCACCATCGTGCGGACCC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTCTTGTCCCTGACTCGTaGAGCGTCGCCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSILVPDS*SVAGHC
Trigger: GCAGTGCCCGGCGACGCTGCACGAGTCAGGGACAAG...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCGACAATGGGCCAGACTaGCGATGGAAGCTACCCCAA +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVADNGPD*RWKLPQ
Trigger: TTGGGGTAGCTTCCATCGGCAGTCTGGCCCATTGTC...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTAGTCCCGGCCCGCCGTaGGGGCTTGACTCACCCCAC +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFSPGPP*GLDSPH
Trigger: GTGGGGTGAGTCAAGCCCCCACGGCGGGCCGGGACT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTACTCCCGACCTCAGGTaGTCCACCAGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSITPDLR*STSLGL
Trigger: GAGGCCAAGGCTGGTGGATCACCTGAGGTCGGGAGT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCGAGCTCCGGAGCGGCTaGAGCACCAGGTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLELRSG*STRSPQ
Trigger: CTGGGGAGACCTGGTGCTGCAGCCGCTCCGGAGCTC...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCGCTCACCATAACCTCTaGCTCCCAGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAAHHNL*LPGSSD
Trigger: ATCGCTTGAACCTGGGAGGCAGAGGTTATGGTGAGC...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTAGGGAGGTCCTCCGATaGGACTTGCTGCTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIREVLR*DLLLQP
Trigger: CGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGTGGCCGAGGTGGTGGTaGTCCAAGTGGAAGAAACTC +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGWPRWW*SKWKKL
Trigger: GAGTTTCTTCCACTTGGACCACCACCACCTCGGCCA...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTCTGCAGAAATTTTGCTaGCCAGGCTGCTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSLQKFC*PGCWQE
Trigger: CTCCTGCCAGCAGCCTGGTCAGCAAAATTTCTGCAG...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACAGCAGCGCCGAGGGCTaGAGCCAGGGGCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYSSAEG*SQGLSR
Trigger: GCGGCTCAGCCCCTGGCTGCAGCCCTCGGCGCTGCT...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGCAGGAGCATAGGTGCTaGAAGCCGATGCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGQEHRC*KPMLSS
Trigger: TGAGGAAAGCATCGGCTTGCAGCACCTATGCTCCTG...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCATAATCGTGCATGGCTaGAGCCACATACAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAIIVHG*SHIQRH
Trigger: ATGGCGCTGTATGTGGCTGCAGCCATGCACGATTAT...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCGATCATAATCGTGCATaGCTGCAGCCACATACAGCG +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVADHNRA*LQPHTA
Trigger: CGCTGTATGTGGCTGCAGCCATGCACGATTATGATC...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTGTCTGGCTTTTGGGTTaGTATCTCCTCGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSVWLLG*YLLASW
Trigger: CCAAGAGGCGAGGAGATACCAACCCAAAAGCCAGAC...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGGTAATACCAAACACGTaGCCCTCTCACCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGVIPNT*PSHPAL
Trigger: AAGGGCTGGGTGAGAGGGCCACGTGTTTGGTATTAC...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 72 bp GCCCTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATaGAAGCTAAATGGAGGAGGGCATTTGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: ALECPPSAKGPL*KLNGGGHLEWL
Trigger: CAGCCATTCCAAATGCCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTCTAGCACGCTCAAGTTaGAAACAAGCACGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSLARSS*KQARAE
Trigger: TTCTGCCCGTGCTTGTTTTCAACTTGAGCGTGCTAG...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACCCCGCCGTGGGGGCTTaGCTCACCCCACTGTGGACG +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYPAVGA*LTPLWT
Trigger: CGTCCACAGTGGGGTGAGTCAAGCCCCCACGGCGGG...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGTTTGTGGTCCCATTCTaGATGCCCCATGAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGFVVPF*MPHELF
Trigger: GAACAGCTCATGGGGCATTCAGAATGGGACCACAAA...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTGAATCAGGGTTAGGATaGCAGAAGAGGACAAGACCC +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSESGLG*QKRTRP
Trigger: GGGTCTTGTCCTCTTCTGTCATCCTAACCCTGATTC...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCAGCCTGCTGTTAGAATaGTTTGCTGGTGGGAACACA +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVASLLLE*FAGGNT
Trigger: TGTGTTCCCACCAGCAAATCATTCTAACAGCAGGCT...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCAGCGTCGCCGGGCACTaGCATGGTATAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLSVAGH*HGIGCP
Trigger: AGGGCACCCTATACCATGGCAGTGCCCGGCGACGCT...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCGCCGCCTCCTTACACTaGTCCAGGTCACAGCCGACC +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLAASLH*SRSQPT
Trigger: GGTCGGCTGTGACCTGGAGCAGTGTAAGGAGGCGGC...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATAGCTGGGACCCCAAATaGTCCCTTGGAGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINSWDPK*SLGAAS
Trigger: GGAGGCGGCTCCAAGGGAGCATTTGGGGTCCCAGCT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTTCTCAGGAGCATAGGTaGTGCAAGCCGATGCTTTCC +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSSQEHR*CKPMLS
Trigger: GGAAAGCATCGGCTTGCAGCACCTATGCTCCTGAGA...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCTTCCTCTTCATTTGGTaGTGGTGCTTCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAFLFIW*WCFFLL
Trigger: GAGGAGGAAGAAGCACCAGCACCAAATGAAGAGGAA...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGGACTTCCAACTGTCCTaGCAGTCCACTCACTCCAAA +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGDFQLS*QSTHSK
Trigger: TTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTC...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTTACTTGGTGTCCGAGTaGCTACCCCACTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSYLVSE*LPHFSP
Trigger: TGGAGAGAAGTGGGGTAGCCACTCGGACACCAAGTA...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTAGAATCAGGACTGGATaGAGGTGCTTCCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSRIRTG*RCFLQF
Trigger: AAACTGCAGGAAGCACCTTCATCCAGTCCTGATTCT...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGCCACAATGTGAGAGATaGAGGATTCCTGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGPQCER*RIPEGW
Trigger: CCAACCTTCAGGAATCCTTCATCTCTCACATTGTGG...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTGTCTGGTCCAGGGATTaGTTTTCTATGCCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSVWSRD*FSMPAN
Trigger: GTTGGCAGGCATAGAAAATCAATCCCTGGACCAGAC...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTCGGCCAGAAGAAGCATaGCTGACAATGGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIRPEEA*LTMGQT
Trigger: AGTCTGGCCCATTGTCAGTCATGCTTCTTCTGGCCG...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTAACCAGGCAGTTTGCTaGGACTTCCACCATAGTAGC +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSNQAVC*DFHHSS
Trigger: GCTACTATGGTGGAAGTCTCAGCAAACTGCCTGGTT...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGCCTGCCAACCGTTaGTCCTCTTCAATGACTTTC +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSMPANR*SSSMTF
Trigger: GAAAGTCATTGAAGAGGAGCAACGGTTGGCAGGCAT...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGACTGGTCAGAACAAATaGCCGCAGAAATCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGTGQNK*PQKSEH
Trigger: GTGCTCTGATTTCTGCGGGCATTTGTTCTGACCAGT...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTCTTGGCCCTCGTTTGTaGTCCCATTCTGAATGCCCC +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSILGPRL*SHSECP
Trigger: GGGGCATTCAGAATGGGACCACAAACGAGGGCCAAG...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTTGTCCAGAAACATCATaGTCTCAGGAGCATAGGTGC +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSCPETS*SQEHRC
Trigger: GCACCTATGCTCCTGAGACCATGATGTTTCTGGACA...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTACTCTGGCCGGGACATaGAAAGATTCCATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSITLAGT*KDSMQQ
Trigger: CTGCTGCATGGAATCTTTTCATGTCCCGGCCAGAGT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCAATGTTGTGCTGGCTTaGAGAGAGTCTTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVANVVLA*RESLTS
Trigger: ACTTGTCAAAGACTCTCTTCAAGCCAGCACAACATT...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCTCTCACCCAGCCCTTaGGTGCCCTCCATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFLSPSP*VPSISK
Trigger: TTTGCTGATGGAGGGCACTCAAGGGCTGGGTGAGAG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATCTGCCTGGATTGCTaGACACAGTTCTGGAATGAA +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSICLDC*TQFWNE
Trigger: TTCATTCCAGAACTGTGTTCAGCAATCCAGGCAGAT...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTTGGAAGAGAAGGGTCTaGCAGGAGGTCGGTAATGAG +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIWKRRV*QEVGNE
Trigger: CTCATTACCGACCTCCTGGCAGACCCTTCTCTTCCA...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTGCACCTGGTCGACTTTaGTTTTTAGCCTTTACATGG +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSAPGRL*FLAFTW
Trigger: CCATGTAAAGGCTAAAAAGCAAAGTCGACCAGGTGC...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCCATGAAAAGATTCCATaGAGCAGCTGCGTGATGATT +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAHEKIP*SSCVMI
Trigger: AATCATCACGCAGCTGCTGCATGGAATCTTTTCATG...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATCACCCAGCCCTTGAGTaGCCTCCATCAGCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINHPALE*PPSAKG
Trigger: GCCTTTTGCTGATGGAGGGCACTCAAGGGCTGGGTG...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGGGCAATAGCACACATTaGCTAACATCCATGGTGCAT +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGGNSTH*LTSMVH
Trigger: ATGCACCATGGATGTTAGGCAATGTGTGCTATTGCC...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTTTCACTCTGGGCTTGTaGATGGCCTGGAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFFTLGL*MAWKVS
Trigger: GCTCACCTTCCAGGCCATTCACAAGCCCAGAGTGAA...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGCATGGGTCTTTGGTGTaGAACACACAAATACGTATG +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGHGSLV*NTQIRM
Trigger: CATACGTATTTGTGTGTTTCACACCAAAGACCCATG...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATTCAAAAATTGCCCAATaGATCCCGCGCGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINSKIAQ*IPRAGA
Trigger: GGCTCCTGCGCGCGGGATGCATTGGGCAATTTTTGA...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTGTCAGTGGCCAAAATTaGTTCAATGACAAGGAAACG +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSVSGQN*FNDKET
Trigger: CGTTTCCTTGTCATTGAAGCAATTTTGGCCACTGAC...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCGAATCGCCATTCCCTaGGGCAGAAAGCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFRIAIP*GRKQSL
Trigger: GAGGCTTTGCTTTCTGCCCCAGGGAATGGCGATTCG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTCTTTCGAATAACTCCTaGAGAATGCTAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSLSNNS*RMLDAP
Trigger: TGGAGCATCTAGCATTCTCCAGGAGTTATTCGAAAG...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGTGCAGGCTCCAAGGTaGGTAGACCTGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFVQAPR*VDLWPR
Trigger: CCTCGGCCACAGGTCTACCCACCTTGGAGCCTGCAC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACGCGGTCTCTCCGTACTaGTGCAGGCTCCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYAVSPY*CRLQGG
Trigger: CCCACCTTGGAGCCTGCACCAGTACGGAGAGACCGC...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGTTTAACAGAGAACCATaGCATCCAGGTAACCAGTTC +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGFNREP*HPGNQF
Trigger: GAACTGGTTACCTGGATGCCATGGTTCTCTGTTAAA...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTGAGGCTGCATCCACTTaGTCCTTTTTACATTTTCCA +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSEAAST*SFLHFP
Trigger: TGGAAAATGTAAAAAGGATCAAGTGGATGCAGCCTC...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCCGGCTCTCAAGGATGTaGACACGTTTGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLRLSRM*TRLVEE
Trigger: CTCTTCCACCAAACGTGTGCACATCCTTGAGAGCCG...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTTTCTGGAAACTGCACTaGAGAAATTTTGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSFWKLH*RNFADQ
Trigger: CTGGTCAGCAAAATTTCTGCAGTGCAGTTTCCAGAA...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCGGCATTTGGAATGGCTaGCTCCCAAAGACACTCCAG +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLGIWNG*LPKTLQ
Trigger: CTGGAGTGTCTTTGGGAGGCAGCCATTCCAAATGCC...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTTTTGTTCCACGTACCTaGCCAAGAGGATCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFFVPRT*PRGSPA
Trigger: TGCTGGGGATCCTCTTGGCCAGGTACGTGGAACAAA...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTGAGGGTCATCATCACTaGATTATTCCAAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSEGHHH*IIPRIR
Trigger: CCTGATTCTTGGAATAATCCAGTGATGATGACCCTC...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTATTCCCTTGGGAATATaGTCTGCCACAGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIIPLGI*SATAAT
Trigger: TGTAGCAGCTGTGGCAGACCATATTCCCAAGGGAAT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGTCATCTGTTCTACTTaGTGTCCGAGTGGCTACCCC +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFVICST*CPSGYP
Trigger: GGGGTAGCCACTCGGACACCAAGTAGAACAGATGAC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCACTGGTCTGGCTTTTaGGTTGGTATCTCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFHWSGF*VGISSP
Trigger: AGGCGAGGAGATACCAACCCAAAAGCCAGACCAGTG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTATGGAGGAGGGCATTTaGAATGGCTGCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFMEEGI*NGCLPK
Trigger: CTTTGGGAGGCAGCCATTCCAAATGCCCTCCTCCAT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGTCCTTTGAGATGTACTaGGTGTGTATGAAAGTCACA +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGSFEMY*VCMKVT
Trigger: TGTGACTTTCATACACACCCAGTACATCTCAAAGGA...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTGGAAGAGGTAATGACTaGTCAGAACAAATGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIGRGND*SEQMPA
Trigger: TGCGGGCATTTGTTCTGACCAGTCATTACCTCTTCC...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGTGCTTCCTGCAGTTTaGTGCTGGTGCTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFVLPAV*CWCCGL
Trigger: GAGACCGCAGCACCAGCATCAAACTGCAGGAAGCAC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTAGTCCAGGTTATCCATaGCAAGAGGTTCGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFSPGYP*QEVREQ
Trigger: TTGCTCCCGAACCTCTTGTCATGGATAACCTGGACT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCTTATATAGCACCGCCTaGGGAGCACTAGTTGCAACC +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLLYSTA*GALVAT
Trigger: GGTTGCAACTAGTGCTCCTCAGGCGGTGCTATATAA...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTCCAAAATTGCTTCAATaGCAAGGAAACGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSPKLLQ*QGNGNA
Trigger: AGCATTTCCGTTTCCTTGTCATTGAAGCAATTTTGG...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATGAGCAGAACGATCCATaGAGGGGCTTATGGGTAATC +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINEQNDP*RGLWVI
Trigger: GATTACCCATAAGCCCCTTCATGGATCGTTCTGCTC...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGTCATCAGTATCTCCTaGCTCATCGCTGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFVISIS*LIAVFH
Trigger: GTGGAAGACAGCGATGAGTCAGGAGATACTGATGAC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTACAAAAACCCTGTGTTaGAATATTCTCCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSTKTLC*NILLHL
Trigger: GAGATGAAGGAGAATATTTCAACACAGGGTTTTTGT...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTTCCCTTAGCATCCTTTaGGATGTACTGGGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSISLSIL*DVLGVY
Trigger: ATACACACCCAGTACATCTCAAAGGATGCTAAGGGA...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTACAGTTCTGATTATGTaGAAATACTCAGTACCACGG +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSTVLIM*KYSVPR
Trigger: CCGTGGTACTGAGTATTTTCACATAATCAGAACTGT...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACTCCTCCGATGGGACTTaGTGCTGCAGCCGGACATCT +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYSSDGT*CCSRTS
Trigger: AGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGA...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCGATGAAGGTGCTTCCTaGAGTTTGATGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLDEGAS*SLMLVL
Trigger: CAGCACCAGCATCAAACTGCAGGAAGCACCTTCATC...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTCTGAGGAGCACTAGTTaGAACCAGGAAAGCATTAGT +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSILRSTS*NQESIS
Trigger: ACTAATGCTTTCCTGGTTGCAACTAGTGCTCCTCAG...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCTTTTTAGCCTTTACATaGTTAGCTGCAGAAATAGCA +
Preference number: 4 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAFLAFT*LAAEIA
Trigger: TGCTATTTCTGCAGCTAACCATGTAAAGGCTAAAAA...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTTTCGGGAGCAAGAATTaGTTTGTCCAGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSFGSKN*FVQKHH
Trigger: ATGATGTTTCTGGACAAACCAATTCTTGCTCCCGAA...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTTCTTCCTTGATAGCCTaGATCTGTTCTGAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSISSLIA*ICSEEC
Trigger: GCACTCTTCAGAACAGATCCAGGCTATCAAGGAAGA...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTACAAGTCAATCTGTTTaGAAACACAGCCCATTCTAT +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSTSQSV*KHSPFY
Trigger: ATAGAATGGGCTGTGTTTCCAAACAGATTGACTTGT...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTTGGAGCCAGCAATCGTaGCCTTCAGTGTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFWSQQS*PSVCMC
Trigger: ACACATACACACTGAAGGCCACGATTGCTGGCTCCA...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATCCAACAAACAGCGTGTaGAACACCACAACAGGGGTT +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINPTNSV*NTTTGV
Trigger: AACCCCTGTTGTGGTGTTCCACACGCTGTTTGTTGG...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCGGGGGAGAACTCTACTaGCAGAAAATGTCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLGGELY*QKMSLS
Trigger: GCTAAGGGACATTTTCTGCCAGTAGAGTTCTCCCCC...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCAGCCTGGATCTGTTCTaGAGAGTGCGACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFSLDLF*RVRLRG
Trigger: ACCCCTCAGTCGCACTCTTCAGAACAGATCCAGGCT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCCAGAAGAAGCATGACTaGCAATGGGCCAGACTGCCG +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFQKKHD*QWARLP
Trigger: CGGCAGTCTGGCCCATTGTCAGTCATGCTTCTTCTG...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATGTTTGTATTAAAGACTaGGGGGTGTCCTGGGATACC +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINVCIKD*GVSWDT
Trigger: GGTATCCCAGGACACCCCTCAGTCTTTAATACAAAC...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTATAAGATGGAGTTTTTaGCCCATAATCAGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSIRWSF*PIISWE
Trigger: TTCCCAACTGATTATGGGTCAAAAACTCCATCTTAT...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGTCCCAGCAATCAGCTaGGACCCCAAATGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFVPAIS*DPKCSL
Trigger: AAGGGAGCATTTGGGGTCCCAGCTGATTGCTGGGAC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCCCGGGATATCTTCCTTaGTCCCAGCAATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFPGYLP*SQQSAG
Trigger: CCCAGCTGATTGCTGGGACCAAGGAAGATATCCCGG...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCTGGTGGTGGTCCAAGTaGAAGAAACTCGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLWWWSK*KKLVST
Trigger: TGTTGAGACGAGTTTCTTCCACTTGGACCACCACCA...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCTCCAAGAATCAGGACTaGATGAAGGTGCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLSKNQD*MKVLPA
Trigger: TGCAGGAAGCACCTTCATCCAGTCCTGATTCTTGGA...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATTTTAGCGAGGGCACCTaGTCGACTTTGCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINFSEGT*STLLFS
Trigger: GCTAAAAAGCAAAGTCGACCAGGTGCCCTCGCTAAA...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTAACCTAGGCTTTGTTTaGCAGTTGTGTCAGCAGATT +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSINLGFV*QLCQQI
Trigger: AATCTGCTGACACAACTGCCAAACAAAGCCTAGGTT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTTTCTTTACATTTAGCTaGACCATTGATATCAGCCAA +
Preference number: 4 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSFFTFS*TIDISQ
Trigger: TTGGCTGATATCAATGGTCCAGCTAAATGTAAAGAA...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGTTTCTTTCGTTTTACTaGGATTGCAACGGAAAGATT +
Preference number: 4 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGFLSFY*DCNGKI
Trigger: AATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAA...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACAGCCTCCTGGGTAGCTaGGATTACAGACATGCGCCA +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYSLLGS*DYRHAP
Trigger: TGGCGCATGTCTGTAATCCCAGCTACCCAGGAGGCT...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTTTGATTTTCTATGCCTaGCAACCGTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFLIFYA*QPLLLF
Trigger: GAAGAGGAGCAACGGTTGGCAGGCATAGAAAATCAA...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTGAGTCTCATGCCTTTTaGACAGCTTTTACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIESHAF*TAFTFK
Trigger: TTTGAAGGTAAAAGCTGTGCAAAAGGCATGAGACTC...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACTGTGCACACGTTTGGTaGAAGAGAAGGGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYCAHVW*KRRVCQ
Trigger: CTGGCAGACCCTTCTCTTCCACCAAACGTGTGCACA...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACGGATGTGCACACGTTTaGTGGAAGAGAAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYGCAHV*WKRRVC
Trigger: GCAGACCCTTCTCTTCCACCAAACGTGTGCACATCC...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCCTTCTCAGGCGCTTTaGAATAGCAAGCTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFPSQAL*NSKLVF
Trigger: AAAGACAAGCTTGCTATTCCAAAGCGCCTGAGAAGG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCGCTACATATAACAGGTaGAGTCAGGATTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLATYNR*SQDLRG
Trigger: TCCCCTCAAATCCTGACTCCACCTGTTATATGTAGC...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTTCTATCCATTGTCACTaGTCTGGCTTTTGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFSIHCH*SGFWVG
Trigger: ACCAACCCAAAAGCCAGACCAGTGACAATGGATAGA...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTAGAATGATTTGCTGGTaGGAACACAAAAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIRMICW*EHKKHF
Trigger: GAAGTGCTTTTTGTGTTCCCACCAGCAAATCATTCT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTGTTAGAATGATTTGCTaGTGGGAACACAAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIVRMIC*WEHKKH
Trigger: GTGCTTTTTGTGTTCCCACCAGCAAATCATTCTAAC...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCCACAGGCTATCACGCTaGAGTACAATTTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFHRLSR*STISQA
Trigger: GGCTTGGGAAATTGTACTTCAGCGTGATAGCCTGTG...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATCGACCTCCATGCAAATaGATCATCATTCTCTTACTG +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINRPPCK*IIILLL
Trigger: CAGTAAGAGAATGATGATTCATTTGCATGGAGGTCG...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCAAAGGAAGTCATGGTTaGACAGTGTATCCACAAGTC +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLKGSHG*TVYPQV
Trigger: GACTTGTGGATACACTGTTCAACCATGACTTCCTTT...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACCAGGATTTCAAAAATTaGCCAATGCATCCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYQDFKN*PMHPAR
Trigger: GCGCGCGGGATGCATTGGGCAATTTTTGAAATCCTG...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCCTGGAGAATGCTAGATaGTCCAATGAGACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLLENAR*SNETSS
Trigger: TGAAGAAGTCTCATTGGAGCATCTAGCATTCTCCAG...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCGCAGATTCTGGAAACTaGACTGCAGAAATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLADSGN*TAEILL
Trigger: CAGCAAAATTTCTGCAGTGCAGTTTCCAGAATCTGC...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCGTAACCTACATTTCCTaGACTGTTTCCTTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLVTYIS*TVSLLS
Trigger: GCTTAGCAAGGAAACAGTGCAGGAAATGTAGGTTAC...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACTCAGCAGGATTCCCTTaGGAATATGGTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYSAGFP*EYGLPQ
Trigger: CTGTGGCAGACCATATTCCCAAGGGAATCCTGCTGA...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCTGGGTAATCCAAGGCTaGCCTCTTCATCACCCTGTT +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFWVIQG*PLHHPV
Trigger: AACAGGGTGATGAAGAGGCCAGCCTTGGATTACCCA...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCAATGTTACTAAATTGTaGAGCCAGCAATCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLNVTKL*SQQSWP
Trigger: AGGCCACGATTGCTGGCTCCACAATTTAGTAACATT...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCCTGAGCATGGGTCTTTaGTGTGAAACACACAAATAC +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLLSMGL*CETHKY
Trigger: GTATTTGTGTGTTTCACACCAAAGACCCATGCTCAG...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCATACCATCTGTCCACTaGAGATGGAGTTCTTTACAT +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLIPSVH*RWSSLH
Trigger: ATGTAAAGAACTCCATCTTCAGTGGACAGATGGTAT...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCTTGAAGAGAGTCTTTaGCAAGTCAATCTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFLEESL*QVNLFG
Trigger: TCCAAACAGATTGACTTGTCAAAGACTCTCTTCAAG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTATTAGAAAAGGTAGATaGTTGGTTGTCCATCGACCT +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFIRKGR*LVVHRP
Trigger: AGGTCGATGGACAACCAATCATCTACCTTTTCTAAT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACGGGATTGATTTTCTATaGCTGCCAACCGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYGIDFL*LPTVAP
Trigger: AGGAGCAACGGTTGGCAGGCATAGAAAATCAATCCC...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTACAAACTACAACAGTTaGCAAGAATCAGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFTNYNS*QESGFS
Trigger: GGAAAAGCCTGATTCTTGGCAACTGTTGTAGTTTGT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATTGTCCTGGGATACCCTaGAAATTTTATGTAGTGTTC +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINCPGIP*KFYVVF
Trigger: GAACACTACATAAAATTTGCAGGGTATCCCAGGACA...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTCATGTAAAACATCAGTaGCATGGATTCTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: TSNCPASPLTPNIALCSIHVKHQ*HGFCYD
Trigger: ATCATAACAGAATCCATGCCACTGATGTTTTACATG...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTATTAGGCAAGTAGACTaGAAAATGCCTCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFIRQVD*KMPQSF
Trigger: GAAAGACTGAGGCATTTTCCAGTCTACTTGCCTAAT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTTGCTTCTTAGTACCATaGACTTTACAAGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFCFLVP*TLQGKQ
Trigger: CTGCTTTCCTTGTAAAGTCCATGGTACTAAGAAGCA...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACAGGCCCACAATCCACTaGAAGTTTCAGCTTTCGAAT +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYRPTIH*KFQLSN
Trigger: ATTCGAAAGCTGAAACTTTCAGTGGATTGTGGGCCT...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACACTGTCAATAGACTGTaGTGGACTTCCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYTVNRL*WTSNCP
Trigger: AGGACAGTTGGAAGTCCATCACAGTCTATTGACAGT...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCTATGTTACCATTCTCTaGGCATGGGTCTTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFYVTIL*AWVFGV
Trigger: CACACCAAAGACCCATGCTCAGAGAATGGTAACATA...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGGTGGGTGGGTTCAGTaGTATTTATTACCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFGGWVQ*YLLPVL
Trigger: AAGCACTGGTAATAAATATCACTGAACCCACCCACC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCACTAAGAGCAAAAGCTaGTTAGTTGGTAACCTACAT +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLTKSKS*LVGNLH
Trigger: ATGTAGGTTACCAACTAAGCAGCTTTTGCTCTTAGT...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTTCGTTTTACTGGGATTaGAACGGAAAGATTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFSFYWD*NGKICS
Trigger: AGAACAAATCTTTCCGTTGCAATCCCAGTAAAACGA...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCTTTATTGAAGCTAAATaGAGGAGGGCATTTGGAATG +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLFIEAK*RRAFGM
Trigger: CATTCCAAATGCCCTCCTCCATTTAGCTTCAATAAA...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGTTGCTCCTCTTCAATaGCTTTCTTCCACATCTTGT +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFVAPLQ*LSSTSC
Trigger: ACAAGATGTGGAAGAAAGTCATTGAAGAGGAGCAAC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACGTGCGTGCATGGGTGTaGATATGTTTTACATGTATC +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYVRAWV*ICFTCI
Trigger: GATACATGTAAAACATATTCACACCCATGCACGCAC...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACAAAGACACTCCAGAGTaGACTTCCTTCTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYKDTPE*TSFCLF
Trigger: GAACAAACAGAAGGAAGTTCACTCTGGAGTGTCTTT...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCAATGCAATAGCCATTTaGCCATCTCAAATTTCTACA +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLNAIAI*PSQIST
Trigger: TGTAGAAATTTGAGATGGGCAAATGGCTATTGCATT...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCTGTGTCAGCAGATTCTaGAAACTGCACTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFCVSRF*KLHCRN
Trigger: ATTTCTGCAGTGCAGTTTCCAGAATCTGCTGACACA...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATATTCAAATAATGCTCTaGAACTTTCATCCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: HKRPRTMVIKCVAACSINIQIML*NFHPSV
Trigger: TACTGAGGGATGAAAGTTCCAGAGCATTATTTGAAT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCATCTTTTTCCCTAAGTaGGCTAGAAACTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: SVGRMYQNSNNALELSSLIFFPK*ARNSFI
Trigger: AATGAAAGAGTTTCTAGCCCACTTAGGGAAAAAGAT...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCACTCAGAATACACCTaGTCTCTTACTTTATTTAAC +
Preference number: 4 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFHSEYT*SLTLFN
Trigger: GTTAAATAAAGTAAGAGACCAGGTGTATTCTGAGTG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCAGAAATATCAGGGGGTaGGTGGGTTCAGTGATATTT +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFRNIRG*VGSVIF
Trigger: AAATATCACTGAACCCACCCACCCCCTGATATTTCT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 72 bp AATTTCTACAGTGTTGTGTCTAAATGTTGTGCTGGCTaGAAGAGAGTCTTTGACAAGTCAATCTGTTTGGAA +
Preference number: 4 (lower is better)
Translates to: NFYSVVSKCCAG*KRVFDKSICLE
Trigger: TTCCAAACAGATTGACTTGTCAAAGACTCTCTTCAAGCCAGCACAACATTTAGACACAACACTGTAGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 72 bp CACAAAATGCGAAGAATCCCAAAATGCAATAGCCATTaGCCCATCTCAAATTTCTACAGTGTTGTGTCTAAA +
Preference number: 4 (lower is better)
Translates to: HKMRRIPKCNSH*PISNFYSVVSK
Trigger: TTTAGACACAACACTGTAGAAATTTGAGATGGGCAAATGGCTATTGCATTTTGGGATTCTTCGCATTTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 72 bp TGTTTCCTTGCTAAGCCACACCATCTCCTTTGTGATTaGGTTTCCTTTATGATTTATTATATCACAGTGACC +
Preference number: 4 (lower is better)
Translates to: CFLAKPHHLLCD*VSFMIYYITVT
Trigger: GGTCACTGTGATATAATAAATCATAAAGGAAACCAAATCACAAAGGAGATGGTGTGGCTTAGCAAGGAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGTCTTCATCTTTTATTaGGAGCCAAACCAGGTCTTA +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFVFIFY*EPNQVL
Trigger: TAAGACCTGGTTTGGCTCTCAATAAAAGATGAAGAC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACTTCCAAGTATTTAGCTaGTCCATAATTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYFQVFS*SIIESR
Trigger: CCTGGACTCAATTATGGAGCAGCTAAATACTTGGAA...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCCTTAGAAGCTGGTGTTaGAATGTGAAAGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFLRSWC*NVKASL
Trigger: CAAAGAAGCTTTCACATTGCAACACCAGCTTCTAAG...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCAAGGCTTTTCTTCTGTaGTCCACAACTTTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFKAFLL*STTFQG
Trigger: TCCTTGAAAAGTTGTGGAGCACAGAAGAAAAGCCTT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR GCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACATTGAAGAGAAGCCATaGTTTCCTCCTATGAGTTTG +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYIEEKP*FPPMSL
Trigger: CAAACTCATAGGAGGAAAGCATGGCTTCTCTTCAAT...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACTTCATCTGGGAGATATaGACCCAGAATTCATTCAGT +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYFIWEI*TQNSFS
Trigger: ACTGAATGAATTCTGGGTCCATATCTCCCAGATGAA...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR TCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACATTGTCATGTACAAATaGCATCCCTATAGTGTCACT +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYIVMYK*HPYSVT
Trigger: AGTGACACTATAGGGATGTCATTTGTACATGACAAT...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACCATAACAAACAGTGTTaGAAAGAAATGGACACCAAC +
Preference number: 4 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYHNKQC*KEMDTN
Trigger: GTTGGTGTCCATTTCTTTCCAACACTGTTTGTTATG...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
3UTR CAA 72 bp TCTGTAAGATATTCCTTTTCTTTCGTTTTACTGGGATaGCAACGGAAAGATTTGTTCTGGTATTCAACCAAA +
Preference number: 4 (lower is better)
Translates to: SVRYSFSFVLLG*QRKDLFWYSTK
Trigger: TTTGGTTGAATACCAGAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTACAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CCA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCTTGTTGGAACAAAAATaGTATGCATTCTTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFLLEQK*YAFFCE
Trigger: CTCACAGAAGAATGCATACCATTTTTGTTCCAACAA...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 90 bp CGGGCTCCGGGCCATTCCGAGGCGCAGCTCGGCGCTGCGCTGCGCTaGAGCGCGCCGGGCCCGCGGCAGATGGAGGTCTCCCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RAPGHSEAQLGAALR*SAPGPRQMEVSLLL
Trigger: GAGGAGAAGGGAGACCTCCATCTGCCGCGGGCCCGGCGCGCTGCAGCGCAGCGCAGCGCCGAGCTGCGCCTCGGAATGGCCCGGAGCCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 90 bp ATCCAGAAGAAGGCACACAGGAGACTGAAGAGCAGCGCCGAGGGCTaGAGCCAGGGGCTGAGCCGCGCACCGCCCCCGGGAGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: IQKKAHRRLKSSAEG*SQGLSRAPPPGAPP
Trigger: GGGAGGTGCTCCCGGGGGCGGTGCGCGGCTCAGCCCCTGGCTGCAGCCCTCGGCGCTGCTCTTCAGTCTCCTGTGTGCCTTCTTCTGGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS TCA 90 bp CCGCCGTGGGGGCTTGACTCACCCCACTGTGGACGGGCTTGTCCCTaGCTCGTGCAGCGTCGCCGGGCACTGCCATGGTATAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: PPWGLDSPHCGRACP*LVQRRRALPWYRVP
Trigger: GGGCACCCTATACCATGGCAGTGCCCGGCGACGCTGCACGAGTCAGGGACAAGCCCGTCCACAGTGGGGTGAGTCAAGCCCCCACGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 90 bp CCCTCGGTATACAGGGCAGGGAGGTCCTCCGATGGGACTTGCTGCTaGAGCCGGACATCTCGGCGGACACGACGGAGCTGGACCGCCTCC +
Preference number: 5 (lower is better)
Translates to: PSVYRAGRSSDGTCC*SRTSRRTRRSWTAS
Trigger: GGAGGCGGTCCAGCTCCGTCGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTATACCGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS GCA 90 bp GTTCCCTCGGTATACAGGGCAGGGAGGTCCTCCGATGGGACTTGCTaGTGCAGCCGGACATCTCGGCGGACACGACGGAGCTGGACCGCC +
Preference number: 5 (lower is better)
Translates to: VPSVYRAGRSSDGTC*CSRTSRRTRRSWTA
Trigger: GGCGGTCCAGCTCCGTCGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTATACCGAGGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS GCA 90 bp GGGGGCTTGACTCACCCCACTGTGGACGGGCTTGTCCCTGACTCGTaGAGCGTCGCCGGGCACTGCCATGGTATAGGGTGCCCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GGLTHPTVDGLVPDS*SVAGHCHGIGCPLH
Trigger: GTGAAGAGGGCACCCTATACCATGGCAGTGCCCGGCGACGCTGCACGAGTCAGGGACAAGCCCGTCCACAGTGGGGTGAGTCAAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 90 bp GCTGTTCCCTCGGTATACAGGGCAGGGAGGTCCTCCGATGGGACTTaGTGCTGCAGCCGGACATCTCGGCGGACACGACGGAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: AVPSVYRAGRSSDGT*CCSRTSRRTRRSWT
Trigger: GGTCCAGCTCCGTCGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTATACCGAGGGAACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS CCA 90 bp TTGGAGCCGCCTCCGCGGACTGCGGCAAGATTTGTTCCACGTACCTaGCCAAGAGGATCCCCAGCACGCCGGCCAGGTACGCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: LEPPPRTAARFVPRT*PRGSPARRPGTPGK
Trigger: CTTACCTGGCGTACCTGGCCGGCGTGCTGGGGATCCTCTTGGCCAGGTACGTGGAACAAATCTTGCCGCAGTCCGCGGAGGCGGCTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 90 bp CCCATGAGCTGTTCCCTCGGTATACAGGGCAGGGAGGTCCTCCGATaGGACTTGCTGCTGCAGCCGGACATCTCGGCGGACACGACGGAG +
Preference number: 5 (lower is better)
Translates to: PMSCSLGIQGREVLR*DLLLQPDISADTTE
Trigger: CTCCGTCGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTATACCGAGGGAACAGCTCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS GCA 90 bp ATCAGCTGGGACCCCAAATGCTCCCTTGGAGCCGCCTCCGCGGACTaGGGCAAGATTTGTTCCACGTACCTGGCCAAGAGGATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: ISWDPKCSLGAASAD*GKICSTYLAKRIPS
Trigger: GCTGGGGATCCTCTTGGCCAGGTACGTGGAACAAATCTTGCCGCAGTCCGCGGAGGCGGCTCCAAGGGAGCATTTGGGGTCCCAGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 90 bp CACGGCTCTCAAGGATGTGCACACGTTTGGTGGAAGAGAAGGGTCTaGCAGGAGGTCGGTAATGAGGCCGTGGGCCTCGCCCATGACGGC +
Preference number: 5 (lower is better)
Translates to: HGSQGCAHVWWKRRV*QEVGNEAVGLAHDG
Trigger: GCCGTCATGGGCGAGGCCCACGGCCTCATTACCGACCTCCTGGCAGACCCTTCTCTTCCACCAAACGTGTGCACATCCTTGAGAGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 90 bp CTCCTCTTAAACACCGGGATATCTTCCTTGGTCCCAGCAATCAGCTaGGACCCCAAATGCTCCCTTGGAGCCGCCTCCGCGGACTGCGGC +
Preference number: 5 (lower is better)
Translates to: LLLNTGISSLVPAIS*DPKCSLGAASADCG
Trigger: GCCGCAGTCCGCGGAGGCGGCTCCAAGGGAGCATTTGGGGTCCCAGCTGATTGCTGGGACCAAGGAAGATATCCCGGTGTTTAAGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 90 bp ATCTTCCTTGGTCCCAGCAATCAGCTGGGACCCCAAATGCTCCCTTaGAGCCGCCTCCGCGGACTGCGGCAAGATTTGTTCCACGTACCT +
Preference number: 5 (lower is better)
Translates to: IFLGPSNQLGPQMLP*SRLRGLRQDLFHVP
Trigger: AGGTACGTGGAACAAATCTTGCCGCAGTCCGCGGAGGCGGCTCCAAGGGAGCATTTGGGGTCCCAGCTGATTGCTGGGACCAAGGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 90 bp CTGGTGCAGGCTCCAAGGTGGGTAGACCTGTGGCCGAGGTGGTGGTaGTCCAAGTGGAAGAAACTCGTCTCAACAAGCCAGGAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: LVQAPRWVDLWPRWW*SKWKKLVSTSQEAN
Trigger: GTTTGCCTCCTGGCTTGTTGAGACGAGTTTCTTCCACTTGGACCACCACCACCTCGGCCACAGGTCTACCCACCTTGGAGCCTGCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 90 bp GTACTGGTGCAGGCTCCAAGGTGGGTAGACCTGTGGCCGAGGTGGTaGTGGTCCAAGTGGAAGAAACTCGTCTCAACAAGCCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: VLVQAPRWVDLWPRW*WSKWKKLVSTSQEA
Trigger: TGCCTCCTGGCTTGTTGAGACGAGTTTCTTCCACTTGGACCACCACCACCTCGGCCACAGGTCTACCCACCTTGGAGCCTGCACCAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 90 bp TGCGGTCTCTCCGTACTGGTGCAGGCTCCAAGGTGGGTAGACCTGTaGCCGAGGTGGTGGTGGTCCAAGTGGAAGAAACTCGTCTCAACA +
Preference number: 5 (lower is better)
Translates to: CGLSVLVQAPRWVDL*PRWWWSKWKKLVST
Trigger: TGTTGAGACGAGTTTCTTCCACTTGGACCACCACCACCTCGGCCACAGGTCTACCCACCTTGGAGCCTGCACCAGTACGGAGAGACCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 90 bp TTTGGTGGAAGAGAAGGGTCTGCCAGGAGGTCGGTAATGAGGCCGTaGGCCTCGCCCATGACGGCGATGTCCACAGTAATACTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: FGGREGSARRSVMRP*ASPMTAMSTVILVP
Trigger: AGGAACCAGTATTACTGTGGACATCGCCGTCATGGGCGAGGCCCACGGCCTCATTACCGACCTCCTGGCAGACCCTTCTCTTCCACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS-3UTR CAA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCCCACTGTGGACGGGCTaGTCCCTGACTCGTGCAGCG +
Preference number: 5 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAPLWTG*SLTRAA
Trigger: CGCTGCACGAGTCAGGGACAAGCCCGTCCACAGTGG...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 90 bp TGTGCTGAGCAAGTTGCTCACGGCTCTCAAGGATGTGCACACGTTTaGTGGAAGAGAAGGGTCTGCCAGGAGGTCGGTAATGAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: CAEQVAHGSQGCAHV*WKRRVCQEVGNEAV
Trigger: CACGGCCTCATTACCGACCTCCTGGCAGACCCTTCTCTTCCACCAAACGTGTGCACATCCTTGAGAGCCGTGAGCAACTTGCTCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 90 bp GCTCCAAGGTGGGTAGACCTGTGGCCGAGGTGGTGGTGGTCCAAGTaGAAGAAACTCGTCTCAACAAGCCAGGAGGCAAACTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: APRWVDLWPRWWWSK*KKLVSTSQEANSFS
Trigger: TGAGAAGGAGTTTGCCTCCTGGCTTGTTGAGACGAGTTTCTTCCACTTGGACCACCACCACCTCGGCCACAGGTCTACCCACCTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS-3UTR CAA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCCCTCTCACCCAGCCCTaGAGTGCCCTCCATCAGCAA +
Preference number: 5 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAPLTQP*SALHQQ
Trigger: TTGCTGATGGAGGGCACTCAAGGGCTGGGTGAGAGG...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 90 bp GTGGCTACCCCACTTCTCTCCAGGGGCTCATCAGCAGGATTCCCTTaGGAATATGGTCTGCCACAGCTGCTACATATAACAGGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: VATPLLSRGSSAGFP*EYGLPQLLHITGGV
Trigger: GACTCCACCTGTTATATGTAGCAGCTGTGGCAGACCATATTCCCAAGGGAATCCTGCTGATGAGCCCCTGGAGAGAAGTGGGGTAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS TCA 90 bp GATTATTCCAAGAATCAGGACTGGATGAAGGTGCTTCCTGCAGTTTaGTGCTGGTGCTGCGGTCTCTCCGTACTGGTGCAGGCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: DYSKNQDWMKVLPAV*CWCCGLSVLVQAPR
Trigger: CCTTGGAGCCTGCACCAGTACGGAGAGACCGCAGCACCAGCATCAAACTGCAGGAAGCACCTTCATCCAGTCCTGATTCTTGGAATAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS-3UTR CAA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGACCGGGATATCTTCCTaGGTCCCAGCAATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGTGISS*VPAISW
Trigger: CCAGCTGATTGCTGGGACCAAGGAAGATATCCCGGT...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCTGTGTGCTGAGCAAGTaGCTCACGGCTCTCAAGGAT +
Preference number: 5 (lower is better)
Translates to: TGVVSGTFTPERQTTTVACVLSK*LTALKD
Trigger: ATCCTTGAGAGCCGTGAGCAACTTGCTCAGCACACA...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 90 bp GAACCTAGGCTTTGTTTGGCAGTTGTGTCAGCAGATTCTGGAAACTaGACTGCAGAAATTTTGCTGACCAGGCTGCTGGCAGGAGTCCCT +
Preference number: 5 (lower is better)
Translates to: EPRLCLAVVSADSGN*TAEILLTRLLAGVP
Trigger: AGGGACTCCTGCCAGCAGCCTGGTCAGCAAAATTTCTGCAGTGCAGTTTCCAGAATCTGCTGACACAACTGCCAAACAAAGCCTAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS-3UTR CAA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCGGTCTGGTCCAGGGATaGATTTTCTATGCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAGLVQG*IFYACQ
Trigger: TTGGCAGGCATAGAAAATCAATCCCTGGACCAGACC...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 90 bp GTCCAGAAACATCATGGTCTCAGGAGCATAGGTGCTGCAAGCCGATaGTTTCCTCAGAGGCTCTCTCAGGCACTCTGTTTCATCTTCATT +
Preference number: 5 (lower is better)
Translates to: VQKHHGLRSIGAASR*FPQRLSQALCFIFI
Trigger: AATGAAGATGAAACAGAGTGCCTGAGAGAGCCTCTGAGGAAAGCATCGGCTTGCAGCACCTATGCTCCTGAGACCATGATGTTTCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS GCA 90 bp AGAGTGCGACTGAGGGGTCTGGTCCAGGGATTGATTTTCTATGCCTaGCAACCGTTGCTCCTCTTCAATGACTTTCTTCCACATCTTGTG +
Preference number: 5 (lower is better)
Translates to: RVRLRGLVQGLIFYA*QPLLLFNDFLPHLV
Trigger: CACAAGATGTGGAAGAAAGTCATTGAAGAGGAGCAACGGTTGGCAGGCATAGAAAATCAATCCCTGGACCAGACCCCTCAGTCGCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS-3UTR CAA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGTCAGGATTTCAAAAATaGCCCAATGCATCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGSGFQK*PNASRA
Trigger: CGCGCGGGATGCATTGGGCAATTTTTGAAATCCTGA...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGCTGAGAAATAAGAAGTaGCTAAGTCCCGTCGGAGAG +
Preference number: 5 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGLRNKK*LSPVGE
Trigger: CTCTCCGACGGGACTTAGCAACTTCTTATTTCTCAG...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGGGCACCTGGTCGACTTaGCTTTTTAGCCTTTACATG +
Preference number: 5 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGGTWST*LFSLYM
Trigger: CATGTAAAGGCTAAAAAGCAAAGTCGACCAGGTGCC...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCACTTTCTTCCACATCTaGTGGTTCTGTAAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: TGVVSGTFTPERQTTTVATFFHI*WFCKRC
Trigger: GCACCTCTTACAGAACCACAAGATGTGGAAGAAAGT...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTGCAAAAGGCCCTTTATaGAAGCTAAATGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSAKGPL*KLNGGG
Trigger: CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGC...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS TCA 90 bp AATTCCACCCTCGGAATCCTTCTTCTCCCCAGGCCCACAATCCACTaGAAGTTTCAGCTTTCGAATAACTCCTGGAGAATGCTAGATGCT +
Preference number: 5 (lower is better)
Translates to: NSTLGILLLPRPTIH*KFQLSNNSWRMLDA
Trigger: AGCATCTAGCATTCTCCAGGAGTTATTCGAAAGCTGAAACTTTCAGTGGATTGTGGGCCTGGGGAGAAGAAGGATTCCGAGGGTGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 90 bp CAAGTCAATCTGTTTGGAAACACAGCCCATTCTATCCATTGTCACTaGTCTGGCTTTTGGGTTGGTATCTCCTCGCCTCTTGGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: QVNLFGNTAHSIHCH*SGFWVGISSPLGFP
Trigger: AGGGAAACCAAGAGGCGAGGAGATACCAACCCAAAAGCCAGACCAGTGACAATGGATAGAATGGGCTGTGTTTCCAAACAGATTGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTGCTAGCACGCTCAAGTaGAAAACAAGCACGGGCAGA +
Preference number: 5 (lower is better)
Translates to: TSNCPASPLTPNIALCSIASTLK*KTSTGR
Trigger: TCTGCCCGTGCTTGTTTTCAACTTGAGCGTGCTAGC...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCACCCCAAATGCTCCCTaGGAGCCGCCTCCGCGGACT +
Preference number: 5 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFTPNAP*EPPPRT
Trigger: AGTCCGCGGAGGCGGCTCCAAGGGAGCATTTGGGGT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTAGGATGTGCACACGTTaGGTGGAAGAGAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: TSNCPASPLTPNIALCSIRMCTR*VEEKGL
Trigger: CAGACCCTTCTCTTCCACCAAACGTGTGCACATCCT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTGAACCTAGGCTTTGTTaGGCAGTTGTGTCAGCAGAT +
Preference number: 5 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSEPRLC*AVVSAD
Trigger: ATCTGCTGACACAACTGCCAAACAAAGCCTAGGTTC...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGCACACACACACAGTGTaGGCAGGATGTATCAGAATT +
Preference number: 5 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGHTHTV*AGCIRI
Trigger: AATTCTGATACATCCTGCCAACACTGTGTGTGTGTG...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTCTCAGTCTTTCGGGTTaGAGGCTGGTGATAGAGCTC +
Preference number: 5 (lower is better)
Translates to: TSNCPASPLTPNIALCSILSLSG*RLVIEL
Trigger: GAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAG...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGGACTGCGGCAAGATTaGTTCCACGTACCTGGCCAA +
Preference number: 5 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFGLRQD*FHVPGQ
Trigger: TTGGCCAGGTACGTGGAACAAATCTTGCCGCAGTCC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACGTCCTCCGATGGGACTaGCTGCTGCAGCCGGACATC +
Preference number: 5 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYVLRWD*LLQPDI
Trigger: GATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGAC...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATAAGACTGTGATCCTCTaGGCCCTCGTTTGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: HKRPRTMVIKCVAACSINKTVIL*ALVCGP
Trigger: GGGACCACAAACGAGGGCCAAGAGGATCACAGTCTT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTGTTCGGGAGCAAGAATaGGTTTGTCCAGAAACATCA +
Preference number: 5 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSVREQE*VCPETS
Trigger: TGATGTTTCTGGACAAACCAATTCTTGCTCCCGAAC...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCTCACTGGTCTGGCTTTaGGGTTGGTATCTCCTCGCC +
Preference number: 5 (lower is better)
Translates to: SVGRMYQNSNNALELSSLSLVWL*GWYLLA
Trigger: GGCGAGGAGATACCAACCCAAAAGCCAGACCAGTGA...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCATAAATGTTACTAAATaGTGGAGCCAGCAATCGTGG +
Preference number: 5 (lower is better)
Translates to: TGVVSGTFTPERQTTTVAINVTK*WSQQSW
Trigger: CCACGATTGCTGGCTCCACAATTTAGTAACATTTAT...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTAACAAATACCATGTGTaGGCAATAGCACACATTGCC +
Preference number: 5 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSNKYHV*AIAHIA
Trigger: GGCAATGTGTGCTATTGCCAACACATGGTATTTGTT...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 90 bp CACTCTGAGTGTAAGTTAAGGCCCTGTGAGAACCTAGGCTTTGTTTaGCAGTTGTGTCAGCAGATTCTGGAAACTGCACTGCAGAAATTT +
Preference number: 5 (lower is better)
Translates to: HSECKLRPCENLGFV*QLCQQILETALQKF
Trigger: AAATTTCTGCAGTGCAGTTTCCAGAATCTGCTGACACAACTGCCAAACAAAGCCTAGGTTCTCACAGGGCCTTAACTTACACTCAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS-3UTR CAA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTTGTCATCTGTTCTACTaGGTGTCCGAGTGGCTACCC +
Preference number: 5 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFCHLFY*VSEWLP
Trigger: GGGTAGCCACTCGGACACCAAGTAGAACAGATGACA...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTTCTTCTTCTTCTTCCTaGATAGCCTGGATCTGTTCT +
Preference number: 5 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSSSSSS*IAWICS
Trigger: AGAACAGATCCAGGCTATCAAGGAAGAAGAAGAAGA...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTTTCCAGATGAACAAATaGATGTGTGAACATAGGACC +
Preference number: 5 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSFQMNK*MCEHRT
Trigger: GGTCCTATGTTCACACATCAATTTGTTCATCTGGAA...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACAGGGGTTGTCAGTGGGACCTTCACCCCTGAAAGACAAACTACAACAGTTGCCACTAGGTCAGTATTTTaGAATCAGCAGGTAAACACT +
Preference number: 5 (lower is better)
Translates to: TGVVSGTFTPERQTTTVATRSVF*NQQVNT
Trigger: AGTGTTTACCTGCTGATTCAAAAATACTGACCTAGT...GGCAACTGTTGTAGTTTGTCTTTCAGGGGTGAAGGTCCCACTGACAACCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGTGCATGATAGAAAACTaGAGGAAGAAATATCAGGGG +
Preference number: 5 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGCMIEN*RKKYQG
Trigger: CCCCTGATATTTCTTCCTCAAGTTTTCTATCATGCA...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACGGTGCTTCCTGCAGTTaGATGCTGGTGCTGCGGTCT +
Preference number: 5 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYGASCS*MLVLRS
Trigger: AGACCGCAGCACCAGCATCAAACTGCAGGAAGCACC...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCATCAGCAGGATTCCCTaGGGAATATGGTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: SVGRMYQNSNNALELSSLISRIP*GIWSAT
Trigger: TGTGGCAGACCATATTCCCAAGGGAATCCTGCTGAT...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTCATTTAGCTGGACCATaGATATCAGCCAACTTTATA +
Preference number: 5 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSHLAGP*ISANFI
Trigger: TATAAAGTTGGCTGATATCAATGGTCCAGCTAAATG...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTTTGGACTATACAGCTTaGATGAAACTGTCAATAGAC +
Preference number: 5 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSLDYTA*MKLSID
Trigger: GTCTATTGACAGTTTCATCAAAGCTGTATAGTCCAA...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTTTGCAACGGAAAGATTaGTTCTGGTATTCAACCAAA +
Preference number: 5 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSLQRKD*FWYSTK
Trigger: TTTGGTTGAATACCAGAACAAATCTTTCCGTTGCAA...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CTTGAGTGCCCTCCATCAGCAAAAGGCCCTTTATTGAAGCTAAATGGAGGAGGGAGGGCTAATTCACATTaGGAAACATGTATAAGTGCT +
Preference number: 5 (lower is better)
Translates to: LECPPSAKGPLLKLNGGGRANSH*ETCISA
Trigger: AGCACTTATACATGTTTCCAAATGTGAATTAGCCCT...CCCTCCTCCATTTAGCTTCAATAAAGGGCCTTTTGCTGATGGAGGGCACTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTGTGATGGACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTTATAAGATGGAGTTTTaGACCCATAATCAGTTGGGA +
Preference number: 5 (lower is better)
Translates to: TVMDFQLSCQSTHSKHSSYKMEF*THNQLG
Trigger: TCCCAACTGATTATGGGTCAAAAACTCCATCTTATA...AGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGTCCATCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACGGTCTGGCTTTTGGGTaGGTATCTCCTCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYGLAFG*VSPRLL
Trigger: CAAGAGGCGAGGAGATACCAACCCAAAAGCCAGACC...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATAGCCCATTCTATCCATaGTCACTGGTCTGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: HKRPRTMVIKCVAACSINSPFYP*SLVWLL
Trigger: CAAAAGCCAGACCAGTGACAATGGATAGAATGGGCT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTAAATGTTGTGCTGGCTaGAAGAGAGTCTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: TSNCPASPLTPNIALCSIKCCAG*KRVFDK
Trigger: CTTGTCAAAGACTCTCTTCAAGCCAGCACAACATTT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTCAAATTTCTACAGTGTaGTGTCTAAATGTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSQISTV*CLNVVL
Trigger: CAGCACAACATTTAGACACAACACTGTAGAAATTTG...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp TGGAAAATGCCTCAGTCTTTCGGGTTTGAGGCTGGTGATAGAGCTCCTTCAAGTAAATGCAATAGCCATTaGCCCATCTCAAATTTCTAC +
Preference number: 5 (lower is better)
Translates to: WKMPQSFGFEAGDRAPSSKCNSH*PISNFY
Trigger: GTAGAAATTTGAGATGGGCAAATGGCTATTGCATTT...ACTTGAAGGAGCTCTATCACCAGCCTCAAACCCGAAAGACTGAGGCATTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTGACAAACTACAACAGTaGCCAAGAATCAGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: TSNCPASPLTPNIALCSIDKLQQ*PRIRLF
Trigger: GAAAAGCCTGATTCTTGGCAACTGTTGTAGTTTGTC...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGGTCTCCAGGCGACCTaGAACCTCTCTAAGGAAATG +
Preference number: 5 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFGLQAT*NLSKEM
Trigger: CATTTCCTTAGAGAGGTTCAAGGTCGCCTGGAGACC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACTGCACTGCAGAAATTTaGCTGACCAGGCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYCTAEI*LTRLLA
Trigger: TGCCAGCAGCCTGGTCAGCAAAATTTCTGCAGTGCA...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTATAATCAGAGGTAACTaGAGCAGTGTCATCTGTTCT +
Preference number: 5 (lower is better)
Translates to: TSNCPASPLTPNIALCSIIIRGN*SSVICS
Trigger: AGAACAGATGACACTGCTCAAGTTACCTCTGATTAT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGGAGCAAGAATTGGTTaGTCCAGAAACATCATGGTC +
Preference number: 5 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFGARIG*SRNIMV
Trigger: GACCATGATGTTTCTGGACAAACCAATTCTTGCTCC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTTGTCTTCATCTTTTATaGAGAGCCAAACCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: TSNCPASPLTPNIALCSICLHLL*RAKPGL
Trigger: AAGACCTGGTTTGGCTCTCAATAAAAGATGAAGACA...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTAGACGATCATTTTCATaGGTCCAATCTATTCCAACA +
Preference number: 5 (lower is better)
Translates to: TSNCPASPLTPNIALCSIRRSFS*VQSIPT
Trigger: TGTTGGAATAGATTGGACCAATGAAAATGATCGTCT...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATGAGGTGCTGAGTTATTaGGCAGTAGATTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: HKRPRTMVIKCVAACSINEVLSY*AVDFSP
Trigger: AGGAGAAAAATCTACTGCCAAATAACTCAGCACCTC...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGACAAGTCAATCTGTTaGGAAACACAGCCCATTCTA +
Preference number: 5 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFDKSIC*ETQPIL
Trigger: TAGAATGGGCTGTGTTTCCAAACAGATTGACTTGTC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp AGTGTTGGCAGGATGTATCAGAATTCAAATAATGCTCTGGAACTTTCATCCCTCAGAGGCTGCATCCACTaGATCCTTTTTACATTTTCC +
Preference number: 5 (lower is better)
Translates to: SVGRMYQNSNNALELSSLRGCIH*ILFTFS
Trigger: GGAAAATGTAAAAAGGATCAAGTGGATGCAGCCTCT...GAGGGATGAAAGTTCCAGAGCATTATTTGAATTCTGATACATCCTGCCAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp ACTTCCAACTGTCCTGCCAGTCCACTCACTCCAAACATAGCTCTATGTTCAATTGATGTTCTAATTGCTTaGGCCACTATTATTCCTCTT +
Preference number: 5 (lower is better)
Translates to: TSNCPASPLTPNIALCSIDVLIA*ATIIPL
Trigger: AAGAGGAATAATAGTGGCCAAAGCAATTAGAACATC...AATTGAACATAGAGCTATGTTTGGAGTGAGTGGACTGGCAGGACAGTTGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS TCA 90 bp TTGCTTTTTAGCCTTTACATGGTTAGCTGCAGAAATAGCATAGGATaGAGTAAAGGATCTGCTTTTGGTGAGGGTCATCATCACTGGATT +
Preference number: 5 (lower is better)
Translates to: LLFSLYMVSCRNSIG*SKGSAFGEGHHHWI
Trigger: AATCCAGTGATGATGACCCTCACCAAAAGCAGATCCTTTACTTCATCCTATGCTATTTCTGCAGCTAACCATGTAAAGGCTAAAAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS-3UTR CAA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCGGCTTTGTTTGGCAGTaGTGTCAGCAGATTCTGGAA +
Preference number: 5 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFGFVWQ*CQQILE
Trigger: TTCCAGAATCTGCTGACACAACTGCCAAACAAAGCC...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTACCTTGCCATTAAATTaGGCTACGAAGTCAAAGTGT +
Preference number: 5 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFTLPLN*ATKSKC
Trigger: ACACTTTGACTTCGTAGCCAAATTTAATGGCAAGGT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACTATGCCTGCCAACCGTaGCTCCTCTTCAATGACTTT +
Preference number: 5 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYYACQP*LLFNDF
Trigger: AAAGTCATTGAAGAGGAGCAACGGTTGGCAGGCATA...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTATTCTCTTACTGGGCTaGGAGAGAACTACAATGTAT +
Preference number: 5 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFILLLG*ERTTMY
Trigger: ATACATTGTAGTTCTCTCCAAGCCCAGTAAGAGAAT...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCAAGGTAGATGATTGGTaGTCCATCGACCTCCATGCA +
Preference number: 5 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFKVDDW*SIDLHA
Trigger: TGCATGGAGGTCGATGGACAACCAATCATCTACCTT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTGTGAACATAATAATATaGCTGTCACCAAAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFVNIII*LSPKRG
Trigger: CCCCCTTTTTGGTGACAGCAATATTATTATGTTCAC...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATTTCGTTTTACTGGGATaGCAACGGAAAGATTTGTTC +
Preference number: 5 (lower is better)
Translates to: HKRPRTMVIKCVAACSINFVLLG*QRKDLF
Trigger: GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAA...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CCATGGCATCCAGGTAACCAGTTCCAACTTTTCCTACCATTGATTTTATGGTTTCCCTATAGTGTCACTTaGGTTGGCAGTTATTTGAAA +
Preference number: 5 (lower is better)
Translates to: PWHPGNQFQLFLPLILWFPYSVT*VGSYLK
Trigger: TTTCAAATAACTGCCAACCAAAGTGACACTATAGGG...AAACCATAAAATCAATGGTAGGAAAAGTTGGAACTGGTTACCTGGATGCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 90 bp GACAATACCATCTGTCCACTGAAGATGGAGTTCTTTACATTTAGCTaGACCATTGATATCAGCCAACTTTATACACATTTGACAAACCAG +
Preference number: 5 (lower is better)
Translates to: DNTICPLKMEFFTFS*TIDISQLYTHLTNQ
Trigger: CTGGTTTGTCAAATGTGTATAAAGTTGGCTGATATCAATGGTCCAGCTAAATGTAAAGAACTCCATCTTCAGTGGACAGATGGTATTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 90 bp ACACAACCAATCTGGGATACCAGAAAGCTCTTAGAAGGAATATCCTaGCATCTGCCTTTGGGATTTGAAATCCAGACTTTAATTATAGTT +
Preference number: 5 (lower is better)
Translates to: TQPIWDTRKLLEGIS*HLPLGFEIQTLIIV
Trigger: AACTATAATTAAAGTCTGGATTTCAAATCCCAAAGGCAGATGCCAGGATATTCCTTCTAAGAGCTTTCTGGTATCCCAGATTGGTTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542675.1
CDS-3UTR CAA 90 bp AGCTGGTGTTGCAATGTGAAAGCTTCTTTGAGCAAAAAGTTTTTAACAATGTACGTAAAGGATCTGCTTTaGGTGAGGGTCATCATCACT +
Preference number: 5 (lower is better)
Translates to: SWCCNVKASLSKKFLTMYVKDLL*VRVIIT
Trigger: AGTGATGATGACCCTCACCAAAAGCAGATCCTTTAC...GTACATTGTTAAAAACTTTTTGCTCAAAGAAGCTTTCACATTGCAACACCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATACATCATCATTTACCTaGCCATTAAATTTGGCTACG +
Preference number: 5 (lower is better)
Translates to: HKRPRTMVIKCVAACSINTSSFT*PLNLAT
Trigger: CGTAGCCAAATTTAATGGCAAGGTAAATGATGATGT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCATCAATCTGCCTGGATaGCTGAACACAGTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFINLPG*LNTVLE
Trigger: TTCCAGAACTGTGTTCAGCAATCCAGGCAGATTGAT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATCTTTATTTATCCCAATaGACGTCTAGCTGTAATAGC +
Preference number: 5 (lower is better)
Translates to: HKRPRTMVIKCVAACSINLYLSQ*TSSCNS
Trigger: GCTATTACAGCTAGACGTCAATTGGGATAAATAAAG...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp CACAAACGACCTAGGACAATGGTCATAAAATGTGTTGCTGCTTGTTCGATCAATATAAGGGGGATCTTGTaGGTTTTTCTAGACTATGAA +
Preference number: 5 (lower is better)
Translates to: HKRPRTMVIKCVAACSINIRGIL*VFLDYE
Trigger: TTCATAGTCTAGAAAAACCAACAAGATCCCCCTTAT...ATTGATCGAACAAGCAGCAACACATTTTATGACCATTGTCCTAGGTCGTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS TCA 90 bp CCCAGACAGACATCCGTATTTATCATCTGTCACATTATACGTTTTTaGGAATACATATCCCATATGTCCATGTGTAAATCCACTGTCAGA +
Preference number: 5 (lower is better)
Translates to: PRQTSVFIICHIIRF*EYISHMSMCKSTVR
Trigger: TCTGACAGTGGATTTACACATGGACATATGGGATATGTATTCTCAAAAACGTATAATGTGACAGATGATAAATACGGATGTCTGTCTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS-3UTR CAA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCATTGCAACAAATACATaGGCACCACAGGAAGTAAGC +
Preference number: 5 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFIATNT*APQEVS
Trigger: GCTTACTTCCTGTGGTGCCAATGTATTTGTTGCAAT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCAGTGGCTGTTGTTTATaGACTGGTCAGTGTTTCATC +
Preference number: 5 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFSGCCL*TGQCFI
Trigger: GATGAAACACTGACCAGTCAATAAACAACAGCCACT...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCTTAATGCAGTGGCTGTaGTTTATTGACTGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFLMQWL*FIDWSV
Trigger: CACTGACCAGTCAATAAACAACAGCCACTGCATTAA...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS-3UTR CAA 90 bp GTAAGATATTCCTTTTCTTTCGTTTTACTGGGATTGCAACGGAAAGATTTGTTCTTTGGAATAGCAAGCTaGTCTTTTTCAGAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: VRYSFSFVLLGLQRKDLFFGIAS*SFSELS
Trigger: AGAGAGCTCTGAAAAAGACAAGCTTGCTATTCCAAA...GAACAAATCTTTCCGTTGCAATCCCAGTAAAACGAAAGAAAAGGAATATCTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 72 bp GGCCATTCCGAGGCGCAGCTCGGCGCTGCGCTGCGCTaGAGCGCGCCGGGCCCGCGGCAGATGGAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: GHSEAQLGAALR*SAPGPRQMEVS
Trigger: GGAGACCTCCATCTGCCGCGGGCCCGGCGCGCTGCAGCGCAGCGCAGCGCCGAGCTGCGCCTCGGAATGGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS TCA 72 bp GCACGATGGTGGCAGTCCCGGCCCGCCGTGGGGGCTTaGCTCACCCCACTGTGGACGGGCTTGTCCCTGACT +
Preference number: 6 (lower is better)
Translates to: ARWWQSRPAVGA*LTPLWTGLSLT
Trigger: AGTCAGGGACAAGCCCGTCCACAGTGGGGTGAGTCAAGCCCCCACGGCGGGCCGGGACTGCCACCATCGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 72 bp TACAGGGCAGGGAGGTCCTCCGATGGGACTTGCTGCTaGAGCCGGACATCTCGGCGGACACGACGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: YRAGRSSDGTCC*SRTSRRTRRSW
Trigger: CCAGCTCCGTCGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS CAA 90 bp CCCCAAATGCTCCCTTGGAGCCGCCTCCGCGGACTGCGGCAAGATTaGTTCCACGTACCTGGCCAAGAGGATCCCCAGCACGCCGGCCAG +
Preference number: 6 (lower is better)
Translates to: PQMLPWSRLRGLRQD*FHVPGQEDPQHAGQ
Trigger: CTGGCCGGCGTGCTGGGGATCCTCTTGGCCAGGTACGTGGAACAAATCTTGCCGCAGTCCGCGGAGGCGGCTCCAAGGGAGCATTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 72 bp ACTCACCCCACTGTGGACGGGCTTGTCCCTGACTCGTaGAGCGTCGCCGGGCACTGCCATGGTATAGGGTGC +
Preference number: 6 (lower is better)
Translates to: THPTVDGLVPDS*SVAGHCHGIGC
Trigger: GCACCCTATACCATGGCAGTGCCCGGCGACGCTGCACGAGTCAGGGACAAGCCCGTCCACAGTGGGGTGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 72 bp GTATACAGGGCAGGGAGGTCCTCCGATGGGACTTGCTaGTGCAGCCGGACATCTCGGCGGACACGACGGAGC +
Preference number: 6 (lower is better)
Translates to: VYRAGRSSDGTC*CSRTSRRTRRS
Trigger: GCTCCGTCGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTATAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS GCA 72 bp TCGGTATACAGGGCAGGGAGGTCCTCCGATGGGACTTaGTGCTGCAGCCGGACATCTCGGCGGACACGACGG +
Preference number: 6 (lower is better)
Translates to: SVYRAGRSSDGT*CCSRTSRRTRR
Trigger: CCGTCGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTATACCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS CCA 72 bp CCTCCGCGGACTGCGGCAAGATTTGTTCCACGTACCTaGCCAAGAGGATCCCCAGCACGCCGGCCAGGTACG +
Preference number: 6 (lower is better)
Translates to: PPRTAARFVPRT*PRGSPARRPGT
Trigger: CGTACCTGGCCGGCGTGCTGGGGATCCTCTTGGCCAGGTACGTGGAACAAATCTTGCCGCAGTCCGCGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CAA 72 bp CTCGGTATACAGGGCAGGGAGGTCCTCCGATGGGACTaGCTGCTGCAGCCGGACATCTCGGCGGACACGACG +
Preference number: 6 (lower is better)
Translates to: LGIQGREVLRWD*LLQPDISADTT
Trigger: CGTCGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTATACCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS CAA 90 bp AGCTGTTCCCTCGGTATACAGGGCAGGGAGGTCCTCCGATGGGACTaGCTGCTGCAGCCGGACATCTCGGCGGACACGACGGAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: SCSLGIQGREVLRWD*LLQPDISADTTELD
Trigger: GTCCAGCTCCGTCGTGTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTATACCGAGGGAACAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS CCA 72 bp TGTTCCCTCGGTATACAGGGCAGGGAGGTCCTCCGATaGGACTTGCTGCTGCAGCCGGACATCTCGGCGGAC +
Preference number: 6 (lower is better)
Translates to: CSLGIQGREVLR*DLLLQPDISAD
Trigger: GTCCGCCGAGATGTCCGGCTGCAGCAGCAAGTCCCATCGGAGGACCTCCCTGCCCTGTATACCGAGGGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000542675.1
CDS CCA 72 bp TGCTGCGGTCTCTCCGTACTGGTGCAGGCTCCAAGGTaGGTAGACCTGTGGCCGAGGTGGTGGTGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: CCGLSVLVQAPR*VDLWPRWWWSK
Trigger: CTTGGACCACCACCACCTCGGCCACAGGTCTACCCACCTTGGAGCCTGCACCAGTACGGAGAGACCGCAGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 72 bp CTCCCTTGGAGCCGCCTCCGCGGACTGCGGCAAGATTaGTTCCACGTACCTGGCCAAGAGGATCCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: LPWSRLRGLRQD*FHVPGQEDPQH
Trigger: GTGCTGGGGATCCTCTTGGCCAGGTACGTGGAACAAATCTTGCCGCAGTCCGCGGAGGCGGCTCCAAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 72 bp GACCCCAAATGCTCCCTTGGAGCCGCCTCCGCGGACTaGGGCAAGATTTGTTCCACGTACCTGGCCAAGAGG +
Preference number: 6 (lower is better)
Translates to: DPKCSLGAASAD*GKICSTYLAKR
Trigger: CCTCTTGGCCAGGTACGTGGAACAAATCTTGCCGCAGTCCGCGGAGGCGGCTCCAAGGGAGCATTTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 72 bp GGTCCCAGCAATCAGCTGGGACCCCAAATGCTCCCTTaGAGCCGCCTCCGCGGACTGCGGCAAGATTTGTTC +
Preference number: 6 (lower is better)
Translates to: GPSNQLGPQMLP*SRLRGLRQDLF
Trigger: GAACAAATCTTGCCGCAGTCCGCGGAGGCGGCTCCAAGGGAGCATTTGGGGTCCCAGCTGATTGCTGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 72 bp AACACCGGGATATCTTCCTTGGTCCCAGCAATCAGCTaGGACCCCAAATGCTCCCTTGGAGCCGCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: NTGISSLVPAIS*DPKCSLGAASA
Trigger: CGCGGAGGCGGCTCCAAGGGAGCATTTGGGGTCCCAGCTGATTGCTGGGACCAAGGAAGATATCCCGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CAA 90 bp TATCTTCCTTGGTCCCAGCAATCAGCTGGGACCCCAAATGCTCCCTaGGAGCCGCCTCCGCGGACTGCGGCAAGATTTGTTCCACGTACC +
Preference number: 6 (lower is better)
Translates to: YLPWSQQSAGTPNAP*EPPPRTAARFVPRT
Trigger: GGTACGTGGAACAAATCTTGCCGCAGTCCGCGGAGGCGGCTCCAAGGGAGCATTTGGGGTCCCAGCTGATTGCTGGGACCAAGGAAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CAA 90 bp ACGGAGCTGGACCGCCTCCTCCTCTTAAACACCGGGATATCTTCCTaGGTCCCAGCAATCAGCTGGGACCCCAAATGCTCCCTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: TELDRLLLLNTGISS*VPAISWDPKCSLGA
Trigger: GGCTCCAAGGGAGCATTTGGGGTCCCAGCTGATTGCTGGGACCAAGGAAGATATCCCGGTGTTTAAGAGGAGGAGGCGGTCCAGCTCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 72 bp CAGGCTCCAAGGTGGGTAGACCTGTGGCCGAGGTGGTaGTGGTCCAAGTGGAAGAAACTCGTCTCAACAAGC +
Preference number: 6 (lower is better)
Translates to: QAPRWVDLWPRW*WSKWKKLVSTS
Trigger: GCTTGTTGAGACGAGTTTCTTCCACTTGGACCACCACCACCTCGGCCACAGGTCTACCCACCTTGGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 72 bp TGGGTAGACCTGTGGCCGAGGTGGTGGTGGTCCAAGTaGAAGAAACTCGTCTCAACAAGCCAGGAGGCAAAC +
Preference number: 6 (lower is better)
Translates to: WVDLWPRWWWSK*KKLVSTSQEAN
Trigger: GTTTGCCTCCTGGCTTGTTGAGACGAGTTTCTTCCACTTGGACCACCACCACCTCGGCCACAGGTCTACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 72 bp GACCGCCTCCTCCTCTTAAACACCGGGATATCTTCCTaGGTCCCAGCAATCAGCTGGGACCCCAAATGCTCC +
Preference number: 6 (lower is better)
Translates to: DRLLLLNTGISS*VPAISWDPKCS
Trigger: GGAGCATTTGGGGTCCCAGCTGATTGCTGGGACCAAGGAAGATATCCCGGTGTTTAAGAGGAGGAGGCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CAA 90 bp GACTTATATCCTCCGGGGTCTCTTCCTACTTCAGGATTTCAAAAATaGCCCAATGCATCCCGCGCGCAGGAGCCGCTGACGCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: DLYPPGSLPTSGFQK*PNASRAQEPLTLEE
Trigger: CTCCTCCAGCGTCAGCGGCTCCTGCGCGCGGGATGCATTGGGCAATTTTTGAAATCCTGAAGTAGGAAGAGACCCCGGAGGATATAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS CCA 72 bp CTTGAGCAGTGTCATCTGTTCTACTTGGTGTCCGAGTaGCTACCCCACTTCTCTCCAGGGGCTCATCAGCAG +
Preference number: 6 (lower is better)
Translates to: LEQCHLFYLVSE*LPHFSPGAHQQ
Trigger: CTGCTGATGAGCCCCTGGAGAGAAGTGGGGTAGCCACTCGGACACCAAGTAGAACAGATGACACTGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS TCA 72 bp AAGAATCAGGACTGGATGAAGGTGCTTCCTGCAGTTTaGTGCTGGTGCTGCGGTCTCTCCGTACTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: KNQDWMKVLPAV*CWCCGLSVLVQ
Trigger: CTGCACCAGTACGGAGAGACCGCAGCACCAGCATCAAACTGCAGGAAGCACCTTCATCCAGTCCTGATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS GCA 72 bp CATCATGGTCTCAGGAGCATAGGTGCTGCAAGCCGATaGTTTCCTCAGAGGCTCTCTCAGGCACTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: HHGLRSIGAASR*FPQRLSQALCF
Trigger: GAAACAGAGTGCCTGAGAGAGCCTCTGAGGAAAGCATCGGCTTGCAGCACCTATGCTCCTGAGACCATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 72 bp CAAGTTGCTCACGGCTCTCAAGGATGTGCACACGTTTaGTGGAAGAGAAGGGTCTGCCAGGAGGTCGGTAAT +
Preference number: 6 (lower is better)
Translates to: QVAHGSQGCAHV*WKRRVCQEVGN
Trigger: ATTACCGACCTCCTGGCAGACCCTTCTCTTCCACCAAACGTGTGCACATCCTTGAGAGCCGTGAGCAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 90 bp GGATTATTCCAAGAATCAGGACTGGATGAAGGTGCTTCCTGCAGTTaGATGCTGGTGCTGCGGTCTCTCCGTACTGGTGCAGGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: GLFQESGLDEGASCS*MLVLRSLRTGAGSK
Trigger: CTTGGAGCCTGCACCAGTACGGAGAGACCGCAGCACCAGCATCAAACTGCAGGAAGCACCTTCATCCAGTCCTGATTCTTGGAATAATCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 90 bp AGTGGCTACCCCACTTCTCTCCAGGGGCTCATCAGCAGGATTCCCTaGGGAATATGGTCTGCCACAGCTGCTACATATAACAGGTGGAGT +
Preference number: 6 (lower is better)
Translates to: SGYPTSLQGLISRIP*GIWSATAATYNRWS
Trigger: ACTCCACCTGTTATATGTAGCAGCTGTGGCAGACCATATTCCCAAGGGAATCCTGCTGATGAGCCCCTGGAGAGAAGTGGGGTAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 72 bp CTCCAGGGGCTCATCAGCAGGATTCCCTTGGGAATATaGTCTGCCACAGCTGCTACATATAACAGGTGGAGT +
Preference number: 6 (lower is better)
Translates to: LQGLISRIPLGI*SATAATYNRWS
Trigger: ACTCCACCTGTTATATGTAGCAGCTGTGGCAGACCATATTCCCAAGGGAATCCTGCTGATGAGCCCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS GCA 72 bp GTTTGTCCAGAAACATCATGGTCTCAGGAGCATAGGTaGTGCAAGCCGATGCTTTCCTCAGAGGCTCTCTCA +
Preference number: 6 (lower is better)
Translates to: VCPETSWSQEHR*CKPMLSSEALS
Trigger: TGAGAGAGCCTCTGAGGAAAGCATCGGCTTGCAGCACCTATGCTCCTGAGACCATGATGTTTCTGGACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 72 bp AAGAAACTTACCTGTGATCCTCTTGGCCCTCGTTTGTaGTCCCATTCTGAATGCCCCATGAGCTGTTCCCTC +
Preference number: 6 (lower is better)
Translates to: KKLTCDPLGPRL*SHSECPMSCSL
Trigger: GAGGGAACAGCTCATGGGGCATTCAGAATGGGACCACAAACGAGGGCCAAGAGGATCACAGGTAAGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542675.1
CDS CCA 72 bp ACAGCCCATTCTATCCATTGTCACTGGTCTGGCTTTTaGGTTGGTATCTCCTCGCCTCTTGGTTTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: TAHSIHCHWSGF*VGISSPLGFPF
Trigger: GAAAGGGAAACCAAGAGGCGAGGAGATACCAACCCAAAAGCCAGACCAGTGACAATGGATAGAATGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 72 bp CACAGCCCATTCTATCCATTGTCACTGGTCTGGCTTTaGGGTTGGTATCTCCTCGCCTCTTGGTTTCCCTTT +
Preference number: 6 (lower is better)
Translates to: HSPFYPLSLVWL*GWYLLASWFPF
Trigger: AAAGGGAAACCAAGAGGCGAGGAGATACCAACCCAAAAGCCAGACCAGTGACAATGGATAGAATGGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS TCA 72 bp CTCGGAATCCTTCTTCTCCCCAGGCCCACAATCCACTaGAAGTTTCAGCTTTCGAATAACTCCTGGAGAATG +
Preference number: 6 (lower is better)
Translates to: LGILLLPRPTIH*KFQLSNNSWRM
Trigger: CATTCTCCAGGAGTTATTCGAAAGCTGAAACTTTCAGTGGATTGTGGGCCTGGGGAGAAGAAGGATTCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359062.4
CDS GCA 72 bp CTTTGTTTGGCAGTTGTGTCAGCAGATTCTGGAAACTaGACTGCAGAAATTTTGCTGACCAGGCTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: LCLAVVSADSGN*TAEILLTRLLA
Trigger: TGCCAGCAGCCTGGTCAGCAAAATTTCTGCAGTGCAGTTTCCAGAATCTGCTGACACAACTGCCAAACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 72 bp CCATTCTATCCATTGTCACTGGTCTGGCTTTTGGGTTaGTATCTCCTCGCCTCTTGGTTTCCCTTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: PFYPLSLVWLLG*YLLASWFPFLF
Trigger: GAAGAGAAAGGGAAACCAAGAGGCGAGGAGATACCAACCCAAAAGCCAGACCAGTGACAATGGATAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 72 bp CTGTTTGGAAACACAGCCCATTCTATCCATTGTCACTaGTCTGGCTTTTGGGTTGGTATCTCCTCGCCTCTT +
Preference number: 6 (lower is better)
Translates to: LFGNTAHSIHCH*SGFWVGISSPL
Trigger: AAGAGGCGAGGAGATACCAACCCAAAAGCCAGACCAGTGACAATGGATAGAATGGGCTGTGTTTCCAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 72 bp CCCATTCTATCCATTGTCACTGGTCTGGCTTTTGGGTaGGTATCTCCTCGCCTCTTGGTTTCCCTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: PILSIVTGLAFG*VSPRLLVSLSL
Trigger: AAGAGAAAGGGAAACCAAGAGGCGAGGAGATACCAACCCAAAAGCCAGACCAGTGACAATGGATAGAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 90 bp TCTTTGACAAGTCAATCTGTTTGGAAACACAGCCCATTCTATCCATaGTCACTGGTCTGGCTTTTGGGTTGGTATCTCCTCGCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: SLTSQSVWKHSPFYP*SLVWLLGWYLLASW
Trigger: CCAAGAGGCGAGGAGATACCAACCCAAAAGCCAGACCAGTGACAATGGATAGAATGGGCTGTGTTTCCAAACAGATTGACTTGTCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 72 bp GGCAAACTCCTTCTCAGGCGCTTTGGAATAGCAAGCTaGTCTTTTTCAGAGCTCTCTTCAGAGTCAGAACAG +
Preference number: 6 (lower is better)
Translates to: GKLLLRRFGIAS*SFSELSSESEQ
Trigger: CTGTTCTGACTCTGAAGAGAGCTCTGAAAAAGACAAGCTTGCTATTCCAAAGCGCCTGAGAAGGAGTTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 72 bp AGTCAATCTGTTTGGAAACACAGCCCATTCTATCCATaGTCACTGGTCTGGCTTTTGGGTTGGTATCTCCTC +
Preference number: 6 (lower is better)
Translates to: SQSVWKHSPFYP*SLVWLLGWYLL
Trigger: GAGGAGATACCAACCCAAAAGCCAGACCAGTGACAATGGATAGAATGGGCTGTGTTTCCAAACAGATTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 72 bp GCTGGCTTGAAGAGAGTCTTTGACAAGTCAATCTGTTaGGAAACACAGCCCATTCTATCCATTGTCACTGGT +
Preference number: 6 (lower is better)
Translates to: AGLKRVFDKSIC*ETQPILSIVTG
Trigger: ACCAGTGACAATGGATAGAATGGGCTGTGTTTCCAAACAGATTGACTTGTCAAAGACTCTCTTCAAGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 90 bp AAATGTTGTGCTGGCTTGAAGAGAGTCTTTGACAAGTCAATCTGTTaGGAAACACAGCCCATTCTATCCATTGTCACTGGTCTGGCTTTT +
Preference number: 6 (lower is better)
Translates to: KCCAGLKRVFDKSIC*ETQPILSIVTGLAF
Trigger: AAAAGCCAGACCAGTGACAATGGATAGAATGGGCTGTGTTTCCAAACAGATTGACTTGTCAAAGACTCTCTTCAAGCCAGCACAACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS TCA 72 bp AGCCTTTACATGGTTAGCTGCAGAAATAGCATAGGATaGAGTAAAGGATCTGCTTTTGGTGAGGGTCATCAT +
Preference number: 6 (lower is better)
Translates to: SLYMVSCRNSIG*SKGSAFGEGHH
Trigger: ATGATGACCCTCACCAAAAGCAGATCCTTTACTTCATCCTATGCTATTTCTGCAGCTAACCATGTAAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CAA 72 bp GTCACTGTTGTTATTGGTTTCATAATCAGAGGTAACTaGAGCAGTGTCATCTGTTCTACTTGGTGTCCGAGT +
Preference number: 6 (lower is better)
Translates to: VTVVIGFIIRGN*SSVICSTWCPS
Trigger: ACTCGGACACCAAGTAGAACAGATGACACTGCTCAAGTTACCTCTGATTATGAAACCAATAACAACAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS GCA 72 bp GGCACTCTGTTTCATCTTCATTCTGTACAATGTCACTaGTGTCACTGTTGTTATTGGTTTCATAATCAGAGG +
Preference number: 6 (lower is better)
Translates to: GTLFHLHSVQCH*CHCCYWFHNQR
Trigger: CCTCTGATTATGAAACCAATAACAACAGTGACAGCAGTGACATTGTACAGAATGAAGATGAAACAGAGTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1
CDS CCA 72 bp ATCTGTCCACTGAAGATGGAGTTCTTTACATTTAGCTaGACCATTGATATCAGCCAACTTTATACACATTTG +
Preference number: 6 (lower is better)
Translates to: ICPLKMEFFTFS*TIDISQLYTHL
Trigger: CAAATGTGTATAAAGTTGGCTGATATCAATGGTCCAGCTAAATGTAAAGAACTCCATCTTCAGTGGACAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359062.4
ENST00000544307.1