RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE1C (Homo sapiens)

Ensembl gene IDs: ENSG00000154678

Ensembl transcript IDs: ENST00000321453.12, ENST00000396182.6, ENST00000396184.7, ENST00000396189.2, ENST00000396191.6, ENST00000396193.5, ENST00000464881.1, ENST00000478736.1, ENST00000479980.1, ENST00000482681.5, ENST00000495221.1, ENST00000672256.1

Found 800 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCAAAGCTGAGAGGATGAGTCTCCAGTTGGCACTGCCTCTGGCCTaGAACAGCCAGCATTCACCCCACAAAGGGGGACAAGGTCTCCTC +
Preference number: 1 (lower is better)
Translates to: TKAERMSLQLALPLA*NSQHSPHKGGQGLL
Trigger: GAGGAGACCTTGTCCCCCTTTGTGGGGTGAATGCTGGCTGTTGCAGGCCAGAGGCAGTGCCAACTGGAGACTCATCCTCTCAGCTTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CCA 90 bp GGAGTCAACCAGGATAGTACCTGCTCCAACAGCCTCCAAGGGTCTTaGAGGTGTGTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATA +
Preference number: 1 (lower is better)
Translates to: GVNQDSTCSNSLQGS*RCVLLWPVGAEKQI
Trigger: TATCTGCTTCTCAGCACCCACTGGCCACAGCAGGACACACCTCCAAGACCCTTGGAGGCTGTTGGAGCAGGTACTATCCTGGTTGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR TCA 90 bp GAAGCCAGCACTCATGAAGAATACGTGGCTGAAGCTGACCAAAGCTaGGAGGATGAGTCTCCAGTTGGCACTGCCTCTGGCCTGCAACAG +
Preference number: 1 (lower is better)
Translates to: EASTHEEYVAEADQS*EDESPVGTASGLQQ
Trigger: CTGTTGCAGGCCAGAGGCAGTGCCAACTGGAGACTCATCCTCTCAGCTTTGGTCAGCTTCAGCCACGTATTCTTCATGAGTGCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 90 bp CCCACACAGCTCAAATTCAGTTGCTGCCTACCAACTACCCTGTTTTaGCAGCACCCACCCTCTCCAATTTCTCACAGTCCCCATTGCTCC +
Preference number: 1 (lower is better)
Translates to: PTQLKFSCCLPTTLF*QHPPSPISHSPHCS
Trigger: GGAGCAATGGGGACTGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGCAACTGAATTTGAGCTGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR GCA 90 bp ATACAACTTTCATTTCACCTTGGTGGAGTCAACCAGGATAGTACCTaGTCCAACAGCCTCCAAGGGTCTTGGAGGTGTGTCCTGCTGTGG +
Preference number: 1 (lower is better)
Translates to: IQLSFHLGGVNQDST*SNSLQGSWRCVLLW
Trigger: CCACAGCAGGACACACCTCCAAGACCCTTGGAGGCTGTTGGAGCAGGTACTATCCTGGTTGACTCCACCAAGGTGAAATGAAAGTTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR CCA 90 bp GAAATGATCCTGCAGGTTCAGAAGCCAGCACTCATGAAGAATACGTaGCTGAAGCTGACCAAAGCTGAGAGGATGAGTCTCCAGTTGGCA +
Preference number: 1 (lower is better)
Translates to: EMILQVQKPALMKNT*LKLTKAERMSLQLA
Trigger: TGCCAACTGGAGACTCATCCTCTCAGCTTTGGTCAGCTTCAGCCACGTATTCTTCATGAGTGCTGGCTTCTGAACCTGCAGGATCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 90 bp CAAGTGGATAGTGGAATTCAGTTAGACGATTTTGAATGTGTTTCCTaGATGCTGACCGTGTTCCAAACACTGTGGTGGGCCAGCACTGCG +
Preference number: 1 (lower is better)
Translates to: QVDSGIQLDDFECVS*MLTVFQTLWWASTA
Trigger: CGCAGTGCTGGCCCACCACAGTGTTTGGAACACGGTCAGCATTCAGGAAACACATTCAAAATCGTCTAACTGAATTCCACTATCCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CCA 90 bp CGAGGCCATCCGGGAACAAACAGCTCCTTCTTTGTAGGGCTGTCCTaGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTT +
Preference number: 1 (lower is better)
Translates to: RGHPGTNSSFFVGLS*RVHPDYEMLLATSV
Trigger: AACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCAGGACAGCCCTACAAAGAAGGAGCTGTTTGTTCCCGGATGGCCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR TCA 90 bp TGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATaGAGATCAGACTGGCCTGAAAACAAACCTAGTTTTCTCACTGCA +
Preference number: 1 (lower is better)
Translates to: CHPSKDLQLVIDRIG*RSDWPENKPSFLTA
Trigger: TGCAGTGAGAAAACTAGGTTTGTTTTCAGGCCAGTCTGATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR TCA 90 bp TTGGTGCTGTACCAATCATATTATTGGTGGAGCAGAACTATGCAGTaGTTCCTCATGCTGCACATAGAGAATCTATTTGCTGTAGGAGAG +
Preference number: 1 (lower is better)
Translates to: LVLYQSYYWWSRTMQ*FLMLHIENLFAVGE
Trigger: CTCTCCTACAGCAAATAGATTCTCTATGTGCAGCATGAGGAATCACTGCATAGTTCTGCTCCACCAATAATATGATTGGTACAGCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR GCA 90 bp AACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTaGTGTGAAGAGGATCTGAAATGTAACTTAAAGGCATCTCTAGCC +
Preference number: 1 (lower is better)
Translates to: NCENNQDLKGFRYVA*CEEDLKCNLKASLA
Trigger: GGCTAGAGATGCCTTTAAGTTACATTTCAGATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR TCA 90 bp TATTACATGGCTTGCTTTATTCATTTACTTGACCTGCTAGGCCCCTaGAGTCATTTGAATTTCTGGCCACATTATGTGGTGAGGTCATTG +
Preference number: 1 (lower is better)
Translates to: YYMACFIHLLDLLGP*SHLNFWPHYVVRSL
Trigger: CAATGACCTCACCACATAATGTGGCCAGAAATTCAAATGACTTCAGGGGCCTAGCAGGTCAAGTAAATGAATAAAGCAAGCCATGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 90 bp TATTTAATGCATAGGGTGCTACGCATCCTAAAGAGAAAAACCCTGTaGGAGCAAAAACTGTGCTGTACACTAAGGGAGGACAATAACAAC +
Preference number: 1 (lower is better)
Translates to: YLMHRVLRILKRKTL*EQKLCCTLREDNNN
Trigger: GTTGTTATTGTCCTCCCTTAGTGTACAGCACAGTTTTTGCTCTCACAGGGTTTTTCTCTTTAGGATGCGTAGCACCCTATGCATTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 90 bp AGAGGCCTGCTTCCCATTTTTCTAATCTCCCTGGGAACATGTTCATaGTCAGATAAACTGTCTAATGCAAATGACTCTGGTAACATTCTA +
Preference number: 1 (lower is better)
Translates to: RGLLPIFLISLGTCS*SDKLSNANDSGNIL
Trigger: TAGAATGTTACCAGAGTCATTTGCATTAGACAGTTTATCTGATCATGAACATGTTCCCAGGGAGATTAGAAAAATGGGAAGCAGGCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 90 bp CTTCCTTATTCCTCCAAAGAATTGTTTATTCAGCTAGTCATTGGTTaGGGTTTGGGTTTTGGTTCTGCTTGCCTCTCTCTTTTGAGTCTT +
Preference number: 1 (lower is better)
Translates to: LPYSSKELFIQLVIG*GLGFGSACLSLLSL
Trigger: AAGACTCAAAAGAGAGAGGCAAGCAGAACCAAAACCCAAACCTCAACCAATGACTAGCTGAATAAACAATTCTTTGGAGGAATAAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 90 bp CTGAAACGTACCACATTAACACAACTTAAATATAGAGCTATTTGGTaGCATGGGGACCCAAATTCAAGGGCTAACTTGTCACATTTTATC +
Preference number: 1 (lower is better)
Translates to: LKRTTLTQLKYRAIW*HGDPNSRANLSHFI
Trigger: GATAAAATGTGACAAGTTAGCCCTTGAATTTGGGTCCCCATGTCACCAAATAGCTCTATATTTAAGTTGTGTTAATGTGGTACGTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 90 bp CCAAATTACCTGCAATTTCCTATCTCTGGTAATAAGCTATTTGTGTaGGTAGGGTATGCCTGCATATACTTAGAAGATAAGCCTTTAGCA +
Preference number: 1 (lower is better)
Translates to: PNYLQFPISGNKLFV*VGYACIYLEDKPLA
Trigger: TGCTAAAGGCTTATCTTCTAAGTATATGCAGGCATACCCTACTCACACAAATAGCTTATTACCAGAGATAGGAAATTGCAGGTAATTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR GCA 90 bp TATTTAATTTCAATACAAAATCATACCACCTCTAAGAACATAGCTTaGAAACCAATGCCCCATGGATTGAATGCAGCTCACAGGCATGTT +
Preference number: 1 (lower is better)
Translates to: YLISIQNHTTSKNIA*KPMPHGLNAAHRHV
Trigger: AACATGCCTGTGAGCTGCATTCAATCCATGGGGCATTGGTTTGCAAGCTATGTTCTTAGAGGTGGTATGATTTTGTATTGAAATTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR GCA 90 bp ATTGCAACATTATGTTCTTTAACATCTAACTTTGCCATGGTTTGGTaGTGTACCAATCATATTATTGGTGGAGCAGAACTATGCAGTGAT +
Preference number: 1 (lower is better)
Translates to: IATLCSLTSNFAMVW*CTNHIIGGAELCSD
Trigger: ATCACTGCATAGTTCTGCTCCACCAATAATATGATTGGTACAGCACCAAACCATGGCAAAGTTAGATGTTAAAGAACATAATGTTGCAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 90 bp CCAGAAGTGTATTTCACATCATGGAAGTACATTCTATCACAACCATaGAATCAAAACAAGTCCATTATTACCATCTTCCCTTTTGGAAGA +
Preference number: 1 (lower is better)
Translates to: PEVYFTSWKYILSQP*NQNKSIITIFPFGR
Trigger: TCTTCCAAAAGGGAAGATGGTAATAATGGACTTGTTTTGATTTCATGGTTGTGATAGAATGTACTTCCATGATGTGAAATACACTTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CCA 90 bp ATTATTGCAACATTATGTTCTTTAACATCTAACTTTGCCATGGTTTaGTGCTGTACCAATCATATTATTGGTGGAGCAGAACTATGCAGT +
Preference number: 1 (lower is better)
Translates to: IIATLCSLTSNFAMV*CCTNHIIGGAELCS
Trigger: ACTGCATAGTTCTGCTCCACCAATAATATGATTGGTACAGCACCAAACCATGGCAAAGTTAGATGTTAAAGAACATAATGTTGCAATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CAA 90 bp AATACGTGGCTGAAGCTGACCAAAGCTGAGAGGATGAGTCTCCAGTaGGCACTGCCTCTGGCCTGCAACAGCCAGCATTCACCCCACAAA +
Preference number: 2 (lower is better)
Translates to: NTWLKLTKAERMSLQ*ALPLACNSQHSPHK
Trigger: TTTGTGGGGTGAATGCTGGCTGTTGCAGGCCAGAGGCAGTGCCAACTGGAGACTCATCCTCTCAGCTTTGGTCAGCTTCAGCCACGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGGCACTGCGTCTCCTGTaGGGTGTGTGGGCATCTCAG +
Preference number: 2 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLALRLL*GVWASQ
Trigger: CTGAGATGCCCACACACCCCACAGGAGACGCAGTGC...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CAA 90 bp CCCCACACAGCTCAAATTCAGTTGCTGCCTACCAACTACCCTGTTTaGACAGCACCCACCCTCTCCAATTTCTCACAGTCCCCATTGCTC +
Preference number: 2 (lower is better)
Translates to: PHTAQIQLLPTNYPV*TAPTLSNFSQSPLL
Trigger: GAGCAATGGGGACTGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGCAACTGAATTTGAGCTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTGTTGGGGAACATTTTaGCAAGGCAAAGGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHACWGTF*QGKGPG
Trigger: TCCTGGACCTTTGCCTTGCCAAAATGTTCCCCAACA...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGTTCCAAACACTGTGGTaGGCCAGCACTGCGTCTCCT +
Preference number: 2 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLFQTLW*ASTASP
Trigger: AGGAGACGCAGTGCTGGCCCACCACAGTGTTTGGAA...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGCAATGCCCCATGGATTaGATGCAGCTCACAGGCATG +
Preference number: 2 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLQCPMD*MQLTGM
Trigger: CATGCCTGTGAGCTGCATTCAATCCATGGGGCATTG...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATCTTGGAGGTGTGTCCTaGTGTGGCCAGTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNLGGVS*CGQWVL
Trigger: CAGCACCCACTGGCCACAGCAGGACACACCTCCAAG...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR GCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCTTGGAGGTGTGTCCTaGTGTGGCCAGTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHELGGVS*CGQWVL
Trigger: CAGCACCCACTGGCCACAGCAGGACACACCTCCAAG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCAGGTGTGTCCTGCTGTaGCCAGTGGGTGCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIRCVLL*PVGAEK
Trigger: CTTCTCAGCACCCACTGGCCACAGCAGGACACACCT...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR GCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACAAAATCCCACTTTACTTaGACTCCCTTAGATCCCACC +
Preference number: 2 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTKSHFT*TPLDPT
Trigger: GGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTT...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGAGGTGTGTCCTGCTGTaGCCAGTGGGTGCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: WIPPTTVRTIRISRALDMRCVLL*PVGAEK
Trigger: CTTCTCAGCACCCACTGGCCACAGCAGGACACACCT...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTATCAATGCTACCAGTaGAAACAATGGGTTCCCACT +
Preference number: 2 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAYQCYQ*KQWVPT
Trigger: AGTGGGAACCCATTGTTTCCACTGGTAGCATTGATA...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGGTGTTTCCTGAATGCTaGCCGTGTTCCAAACACTGT +
Preference number: 2 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLVFPEC*PCSKHC
Trigger: ACAGTGTTTGGAACACGGTCAGCATTCAGGAAACAC...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCAACCAGGATAGTACCTaGTCCAACAGCCTCCAAGGG +
Preference number: 2 (lower is better)
Translates to: MPSEQGPATSYRQNRMKINQDST*SNSLQG
Trigger: CCCTTGGAGGCTGTTGGAGCAGGTACTATCCTGGTT...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR GCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGGTGGTGGGCCAGCACTaGGTCTCCTGTGGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVVVGQH*VSCGVC
Trigger: ACACACCCCACAGGAGACGCAGTGCTGGCCCACCAC...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAGGTGTGTCCTGCTGTaGCCAGTGGGTGCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTRCVLL*PVGAEK
Trigger: CTTCTCAGCACCCACTGGCCACAGCAGGACACACCT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAGCCTCCAAGGGTCTTaGAGGTGTGTCCTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTSLQGS*RCVLLW
Trigger: CCACAGCAGGACACACCTCCAAGACCCTTGGAGGCT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCTTTGTTGCTGGCGTCTaGGCTGATCCCACATACAGC +
Preference number: 2 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIFVAGV*ADPTYS
Trigger: GCTGTATGTGGGATCAGCCCAGACGCCAGCAACAAA...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR GCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTATCAGCATGCTGTTGTaGATTCGATACTACAAAGTT +
Preference number: 2 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAISMLL*IRYYKV
Trigger: AACTTTGTAGTATCGAATGCACAACAGCATGCTGAT...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACAGCCTCCAAGGGTCTTaGAGGTGTGTCCTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNSLQGS*RCVLLW
Trigger: CCACAGCAGGACACACCTCCAAGACCCTTGGAGGCT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAGGCTACTACTCCCATaGGCCTCCTCAGTGTGTAGC +
Preference number: 2 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTRLLLP*ASSVCS
Trigger: GCTACACACTGAGGAGGCCCATGGGAGTAGTAGCCT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR TCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGGAAGCTCAGCTAGAATaGTGCAAGACACTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLEAQLE*CKTLAA
Trigger: GGCTGCCAGTGTCTTGCATCATTCTAGCTGAGCTTC...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGTATAGAGCTATTTGGTaGCATGGGGACCCAAATTCA +
Preference number: 2 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLYRAIW*HGDPNS
Trigger: TGAATTTGGGTCCCCATGTCACCAAATAGCTCTATA...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGATCAGCATATTCATGTaGTTCACTCTTGGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLISIFM*FTLGKD
Trigger: GTCCTTCCCAAGAGTGAAGCACATGAATATGCTGAT...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGCATCTAACTTTGCCATaGTTTGGTGCTGTACCAATC +
Preference number: 2 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLHLTLP*FGAVPI
Trigger: GATTGGTACAGCACCAAACCATGGCAAAGTTAGATG...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAAACCAGGATAGTACCTaGTCCAACAGCCTCCAAGGG +
Preference number: 2 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLNQDST*SNSLQG
Trigger: CCCTTGGAGGCTGTTGGAGCAGGTACTATCCTGGTT...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCTTTAGATATGTAGCGTaGTGTGAAGAGGATCTGAAA +
Preference number: 2 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSFRYVA*CEEDLK
Trigger: TTTCAGATCCTCTTCACAGCACGCTACATATCTAAA...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR GCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGCCACTTAGTTATCAATaGTACCAGTGGAAACAATGG +
Preference number: 2 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLPLSYQ*YQWKQW
Trigger: CCATTGTTTCCACTGGTAGCATTGATAACTAAGTGG...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTTTGTTGCTGGCGTCTaGGCTGATCCCACATACAGC +
Preference number: 2 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLFVAGV*ADPTYS
Trigger: GCTGTATGTGGGATCAGCCCAGACGCCAGCAACAAA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTATTTGTTGCTGGCGTCTaGGCTGATCCCACATACAGC +
Preference number: 2 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLFVAGV*ADPTYS
Trigger: GCTGTATGTGGGATCAGCCCAGACGCCAGCAACAAA...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGGTGTTCCAAACACTGTaGTGGGCCAGCACTGCGTCT +
Preference number: 2 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVVFQTL*WASTAS
Trigger: AGACGCAGTGCTGGCCCACCACAGTGTTTGGAACAC...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACCACCTTCTCCAGATATaGGTCTTTGTGGAAGAAGGA +
Preference number: 2 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYHLLQI*VFVEEG
Trigger: TCCTTCTTCCACAAAGACCCATATCTGGAGAAGGTG...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGTTGACAGTCATAAAATaGCAATTACTGTGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLLTVIK*QLLCVW
Trigger: CCACACACACAGTAATTGCCATTTTATGACTGTCAA...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CAA 90 bp ATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTaGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACAT +
Preference number: 2 (lower is better)
Translates to: IKSHFTCTPLDPTCN*VSRGLQCYSLSMLH
Trigger: ATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CAA 90 bp CCCATTGCTCCTTCCTGTCTTGCTGATACAAAGGCCCACTATGAATaGCCATTTACCACAATGACTGTGATATTACATGGCTTGCTTTAT +
Preference number: 2 (lower is better)
Translates to: PIAPSCLADTKAHYE*PFTTMTVILHGLLY
Trigger: ATAAAGCAAGCCATGTAATATCACAGTCATTGTGGTAAATGGCAATTCATAGTGGGCCTTTGTATCAGCAAGACAGGAAGGAGCAATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGTAGGGAACATTATTTaGGGAGGCTACTACTCCCAT +
Preference number: 2 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTVGNII*GGYYSH
Trigger: ATGGGAGTAGTAGCCTCCTCAAATAATGTTCCCTAC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGCAAACCAATGCCCCATaGATTGAATGCAGCTCACAG +
Preference number: 2 (lower is better)
Translates to: IWITLVKQHLREQNTLPQQTNAP*IECSSQ
Trigger: CTGTGAGCTGCATTCAATCCATGGGGCATTGGTTTG...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACATTCCACCAACAACTGTaGGAACAATCAGGATCTCAA +
Preference number: 2 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTFHQQL*EQSGSQ
Trigger: TTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAA...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR TCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATACTTTATTCATTTACTTaGCCTGCTAGGCCCCTGAAG +
Preference number: 2 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLILYSFT*PARPLK
Trigger: CTTCAGGGGCCTAGCAGGTCAAGTAAATGAATAAAG...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGCCAAATGCATCTCTTaGAAACCTTCACATCCTTCA +
Preference number: 2 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTAKCIS*KPSHPS
Trigger: TGAAGGATGTGAAGGTTTGCAAGAGATGCATTTGGC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR GCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGTGGTCTCAAGGGGGCTaGAATGTTATTCTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: IWITLVKQHLREQNTLPQWSQGG*NVILFP
Trigger: TGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCA...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGAATTTTACACCCTCTTaGCCTAGGACCACAAAATCA +
Preference number: 2 (lower is better)
Translates to: WIPPTTVRTIRISRALDMNFTPS*PRTTKS
Trigger: TGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATT...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACATTTGTAGGGCTGTCCTaGAGAGTTCATCCTGATTAT +
Preference number: 2 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTFVGLS*RVHPDY
Trigger: ATAATCAGGATGAACTCTCCAGGACAGCCCTACAAA...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR TCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGGAAAACAAATGTTCCTaGCTCAGGAAAGGAACCAGA +
Preference number: 2 (lower is better)
Translates to: IWITLVKQHLREQNTLPQENKCS*LRKGTR
Trigger: TCTGGTTCCTTTCCTGAGTCAGGAACATTTGTTTTC...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGAGTACAGTCACCAGCTaGACATTCAGGTTTATACTA +
Preference number: 2 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLSTVTS*TFRFIL
Trigger: TAGTATAAACCTGAATGTTCAGCTGGTGACTGTACT...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGGAAAATGAAGCCAAATaGATCTCTTGCAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: WIPPTTVRTIRISRALDMENEAK*ISCKPS
Trigger: TGAAGGTTTGCAAGAGATGCATTTGGCTTCATTTTC...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR GCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGAATCAGGCCAGACAGATaGCTTGAAAGCCAGGTCATT +
Preference number: 2 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRIRPDR*LESQVI
Trigger: AATGACCTGGCTTTCAAGGCATCTGTCTGGCCTGAT...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGTCTAAGAACATAGCTTaGAAACCAATGCCCCATGGA +
Preference number: 2 (lower is better)
Translates to: IWITLVKQHLREQNTLPQSKNIA*KPMPHG
Trigger: TCCATGGGGCATTGGTTTGCAAGCTATGTTCTTAGA...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGAATGATGCAAGACACTaGCAGCCTCTTTTATTGTCT +
Preference number: 2 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLNDARH*QPLLLS
Trigger: AGACAATAAAAGAGGCTGCCAGTGTCTTGCATCATT...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGTTGTACGTGCTAAAATaGTACTGCAAGCAGAATGGG +
Preference number: 2 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELLYVLK*YCKQNG
Trigger: CCCATTCTGCTTGCAGTATCATTTTAGCACGTACAA...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATATGGAATCATCATCTTTaGGGTGATGAATGTCAGCAT +
Preference number: 2 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIWNHHL*GDECQH
Trigger: ATGCTGACATTCATCACCGCAAAGATGATGATTCCA...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACATGCAAAGAATTATCTaGCATATCTCCCTGATACTA +
Preference number: 2 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYMQRII*HISLIL
Trigger: TAGTATCAGGGAGATATGGCAGATAATTCTTTGCAT...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATACAGTGGCACAATTCTTaGTTAATTCAGACATTCCTG +
Preference number: 2 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIQWHNS*LIQTFL
Trigger: CAGGAATGTCTGAATTAAGCAAGAATTGTGCCACTG...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAATACCAGTGGAAACAATaGGTTCCCACTCAACAGTAC +
Preference number: 2 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEYQWKQ*VPTQQY
Trigger: GTACTGTTGAGTGGGAACCCATTGTTTCCACTGGTA...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATACTTAAATTCTACAAATaGATGAACACGTGCACTAGG +
Preference number: 2 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLILKFYK*MNTCTR
Trigger: CCTAGTGCACGTGTTCATTCATTTGTAGAATTTAAG...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATATCAGTTAGACGATTTTaGATGTGTTTCCTGAATGCT +
Preference number: 2 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLISVRRF*MCFLNA
Trigger: AGCATTCAGGAAACACATTCAAAATCGTCTAACTGA...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGAATAAGCTATTTGTGTaGGTAGGGTATGCCTGCATA +
Preference number: 2 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVNKLFV*VGYACI
Trigger: TATGCAGGCATACCCTACTCACACAAATAGCTTATT...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR GCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCGAAAATGAAGCCAAATaGATCTCTTGCAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLENEAK*ISCKPS
Trigger: TGAAGGTTTGCAAGAGATGCATTTGGCTTCATTTTC...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR GCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAGAAAATGAAGCCAAATaGATCTCTTGCAAACCTTCA +
Preference number: 2 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLENEAK*ISCKPS
Trigger: TGAAGGTTTGCAAGAGATGCATTTGGCTTCATTTTC...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAGGCACAAATAAAATATaGAACAAAGGCCTCGATAAG +
Preference number: 2 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIGTNKI*NKGLDK
Trigger: CTTATCGAGGCCTTTGTTCCATATTTTATTTGTGCC...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTATTAGCAAAGGATTTTaGGGATGCCCCTTCATGTTT +
Preference number: 2 (lower is better)
Translates to: KMQRIICHISLILIPLALISKGF*GCPFMF
Trigger: AAACATGAAGGGGCATCCTCAAAATCCTTTGCTAAT...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGGTATCAGATCCACAATaGGATCCTGTCAAATGTTTT +
Preference number: 2 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVVSDPQ*DPVKCF
Trigger: AAAACATTTGACAGGATCCCATTGTGGATCTGATAC...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CCA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGTCTAGAATCAGTTATTaGACAATACCTATGGCTGTA +
Preference number: 2 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELSRISY*TIPMAV
Trigger: TACAGCCATAGGTATTGTCCAATAACTGATTCTAGA...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR GCA 72 bp GAGAGGATGAGTCTCCAGTTGGCACTGCCTCTGGCCTaGAACAGCCAGCATTCACCCCACAAAGGGGGACAA +
Preference number: 3 (lower is better)
Translates to: ERMSLQLALPLA*NSQHSPHKGGQ
Trigger: TTGTCCCCCTTTGTGGGGTGAATGCTGGCTGTTGCAGGCCAGAGGCAGTGCCAACTGGAGACTCATCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCAGCCTCCAAGGGTCTaGGAGGTGTGTCCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSQPPRV*EVCPAV
Trigger: CACAGCAGGACACACCTCCAAGACCCTTGGAGGCTG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTACCAACTACCCTGTTTaGACAGCACCCACCCTCTCC +
Preference number: 3 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHATNYPV*TAPTLS
Trigger: GGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGT...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTGATCCCACCTGTAATTaGGTCTCAAGGGGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHADPTCN*VSRGLQ
Trigger: TTGCAGCCCCCTTGAGACCAAATTACAGGTGGGATC...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR GCA 72 bp TCATTTCACCTTGGTGGAGTCAACCAGGATAGTACCTaGTCCAACAGCCTCCAAGGGTCTTGGAGGTGTGTC +
Preference number: 3 (lower is better)
Translates to: SFHLGGVNQDST*SNSLQGSWRCV
Trigger: GACACACCTCCAAGACCCTTGGAGGCTGTTGGAGCAGGTACTATCCTGGTTGACTCCACCAAGGTGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR CCA 72 bp CTGCAGGTTCAGAAGCCAGCACTCATGAAGAATACGTaGCTGAAGCTGACCAAAGCTGAGAGGATGAGTCTC +
Preference number: 3 (lower is better)
Translates to: LQVQKPALMKNT*LKLTKAERMSL
Trigger: GAGACTCATCCTCTCAGCTTTGGTCAGCTTCAGCCACGTATTCTTCATGAGTGCTGGCTTCTGAACCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATCAGCCTCCAAGGGTCTaGGAGGTGTGTCCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNQPPRV*EVCPAV
Trigger: CACAGCAGGACACACCTCCAAGACCCTTGGAGGCTG...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATACCCCTCTTGCTAGTTaGTTGCTGGCGTCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDTPLAS*LLASGL
Trigger: CAGCCCAGACGCCAGCAACAAACTAGCAAGAGGGGT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp AGAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTCCAGATATGGGTCTTaGTGGAAGAAGGAGAAGAAG +
Preference number: 3 (lower is better)
Translates to: RAHGFVCGRTIPIAVPTCSRYGS*WKKEKK
Trigger: CTTCTTCTCCTTCTTCCACAAAGACCCATATCTGGA...GCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp AGAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCCTTCAGATCTTTCTGTaGGGGAACATTTTGGCAAGG +
Preference number: 3 (lower is better)
Translates to: RAHGFVCGRTIPIAVPTCLQIFL*GNILAR
Trigger: CCTTGCCAAAATGTTCCCCAACAGAAAGATCTGAAG...GCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 72 bp CTCAAATTCAGTTGCTGCCTACCAACTACCCTGTTTTaGCAGCACCCACCCTCTCCAATTTCTCACAGTCCC +
Preference number: 3 (lower is better)
Translates to: LKFSCCLPTTLF*QHPPSPISHSP
Trigger: GGGACTGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGCAACTGAATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCAGCCTCCAAGGGTCTaGGAGGTGTGTCCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNQPPRV*EVCPAV
Trigger: CACAGCAGGACACACCTCCAAGACCCTTGGAGGCTG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCCTCTTGCTAGTTTGTaGCTGGCGTCTGGGCTGATC +
Preference number: 3 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEPLASL*LASGLI
Trigger: GATCAGCCCAGACGCCAGCAACAAACTAGCAAGAGG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAACCCCTCTTGCTAGTTaGTTGCTGGCGTCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTTPLAS*LLASGL
Trigger: CAGCCCAGACGCCAGCAACAAACTAGCAAGAGGGGT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCATAAAAACACCCCTCTaGCTAGTTTGTTGCTGGCGT +
Preference number: 3 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSIKTPL*LVCCWR
Trigger: ACGCCAGCAACAAACTAGCAAGAGGGGTGTTTTTAT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGAGGATGAGTCTCCAGTaGGCACTGCCTCTGGCCTGC +
Preference number: 3 (lower is better)
Translates to: IWITLVKQHLREQNTLPQRMSLQ*ALPLAC
Trigger: GCAGGCCAGAGGCAGTGCCAACTGGAGACTCATCCT...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACACCCCTCTTGCTAGTTaGTTGCTGGCGTCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNTPLAS*LLASGL
Trigger: CAGCCCAGACGCCAGCAACAAACTAGCAAGAGGGGT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR TCA 72 bp TACTACTCCCATGGGCCTCCTCAGTGTGTAGCCAAATaGCTTTGTACAGCAAGCGCTAAAGCATCTGTGTAT +
Preference number: 3 (lower is better)
Translates to: YYSHGPPQCVAK*LCTASAKASVY
Trigger: ATACACAGATGCTTTAGCGCTTGCTGTACAAAGTCATTTGGCTACACACTGAGGAGGCCCATGGGAGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR TCA 72 bp CATAGGGTGCTACGCATCCTAAAGAGAAAAACCCTGTaGGAGCAAAAACTGTGCTGTACACTAAGGGAGGAC +
Preference number: 3 (lower is better)
Translates to: HRVLRILKRKTL*EQKLCCTLRED
Trigger: GTCCTCCCTTAGTGTACAGCACAGTTTTTGCTCTCACAGGGTTTTTCTCTTTAGGATGCGTAGCACCCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR GCA 72 bp GACTCTGGTAACATTCTAACTCTAGTGTCACCTCTGTaGCCACTAGTGTCTTTGGTGAGAGAGAGGAAACCT +
Preference number: 3 (lower is better)
Translates to: DSGNILTLVSPL*PLVSLVRERKP
Trigger: AGGTTTCCTCTCTCTCACCAAAGACACTAGTGGGCACAGAGGTGACACTAGAGTTAGAATGTTACCAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR GCA 72 bp GGAGATGAGTTGAGTTTTCCATTCATATATGGCCAGTaGCCTCATCAGGAAAGAGCCTACAGACTCAAGGTG +
Preference number: 3 (lower is better)
Translates to: GDELSFPFIYGQ*PHQERAYRLKV
Trigger: CACCTTGAGTCTGTAGGCTCTTTCCTGATGAGGGCACTGGCCATATATGAATGGAAAACTCAACTCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCCTCTTGCTAGTTTGTaGCTGGCGTCTGGGCTGATC +
Preference number: 3 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNPLASL*LASGLI
Trigger: GATCAGCCCAGACGCCAGCAACAAACTAGCAAGAGG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACCTCACGTTGTTTGTTTaGCTCAGGGGAATATCCCCC +
Preference number: 3 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYLTLFV*LRGISP
Trigger: GGGGGATATTCCCCTGAGCAAAACAAACAACGTGAG...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 72 bp AGTGGAATTCAGTTAGACGATTTTGAATGTGTTTCCTaGATGCTGACCGTGTTCCAAACACTGTGGTGGGCC +
Preference number: 3 (lower is better)
Translates to: SGIQLDDFECVS*MLTVFQTLWWA
Trigger: GGCCCACCACAGTGTTTGGAACACGGTCAGCATTCAGGAAACACATTCAAAATCGTCTAACTGAATTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCATAAAAACACCCCTCTaGCTAGTTTGTTGCTGGCGT +
Preference number: 3 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIIKTPL*LVCCWR
Trigger: ACGCCAGCAACAAACTAGCAAGAGGGGTGTTTTTAT...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATAGCCAAATGCATCTCTaGCAAACCTTCACATCCTTC +
Preference number: 3 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDSQMHL*QTFTSF
Trigger: GAAGGATGTGAAGGTTTGCAAGAGATGCATTTGGCT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAGGCCAGACAGATGCCTaGAAAGCCAGGTCATTAGCA +
Preference number: 3 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIGQTDA*KARSLA
Trigger: TGCTAATGACCTGGCTTTCAAGGCATCTGTCTGGCC...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CCA 72 bp CCACTTCATCATCAGCATATTCATGTGCTTCACTCTTaGGAAGGACTCAGAGATTCCTGTGTGACCAATAAC +
Preference number: 3 (lower is better)
Translates to: PLHHQHIHVLHS*EGLRDSCVTNN
Trigger: GTTATTGGTCACACAGGAATCTCTGAGTCCTTCCCAAGAGTGAAGCACATGAATATGCTGATGATGAAGTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CCA 72 bp GAGAGAGAGGAAACCTTAAAAAGTAAAATCTGGCCTTaGCAGGTAATATGTCTCTTGATACCCAGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: EREETLKSKIWP*QVICLLIPRGR
Trigger: CCTCCCTCTGGGTATCAAGAGACATATTACCTGCCAAGGCCAGATTTTACTTTTTAAGGTTTCCTCTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCAAGTACATGAGGTTATaGGGCATGAGGCACAATCTT +
Preference number: 3 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIKYMRL*GMRHNL
Trigger: AAGATTGTGCCTCATGCCCAATAACCTCATGTACTT...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCAAGCTATCTCTAGTCTaGAGCCTTTCCTTGCTACTT +
Preference number: 3 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIKLSLV*SLSLLL
Trigger: AAGTAGCAAGGAAAGGCTCAAGACTAGAGATAGCTT...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGCAGGTGTGTAAGCCCTaGCTCTGTGTGTGTAAACCA +
Preference number: 3 (lower is better)
Translates to: IWITLVKQHLREQNTLPQQVCKP*LCVCKP
Trigger: TGGTTTACACACACAGAGCAAGGGCTTACACACCTG...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 72 bp GTTGCTGGCGTCTGGGCTGATCCCACATACAGCAATTaGAAAGTCTATACAAGAACAACAAAGAGGAAAATC +
Preference number: 3 (lower is better)
Translates to: VAGVWADPTYSN*KVYTRTTKRKI
Trigger: GATTTTCCTCTTTGTTGTTCTTGTATAGACTTTTCAATTGCTGTATGTGGGATCAGCCCAGACGCCAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGTTGCTCCTTCCTGTCTaGCTGATACAAAGGCCCACT +
Preference number: 3 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVLLLPV*LIQRPT
Trigger: AGTGGGCCTTTGTATCAGCAAGACAGGAAGGAGCAA...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAATTCTCACAGTCCCCATaGCTCCTTCCTGTCTTGCTG +
Preference number: 3 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEFSQSP*LLPVLL
Trigger: CAGCAAGACAGGAAGGAGCAATGGGGACTGTGAGAA...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 72 bp TCCTCCAAAGAATTGTTTATTCAGCTAGTCATTGGTTaGGGTTTGGGTTTTGGTTCTGCTTGCCTCTCTCTT +
Preference number: 3 (lower is better)
Translates to: SSKELFIQLVIG*GLGFGSACLSL
Trigger: AAGAGAGAGGCAAGCAGAACCAAAACCCAAACCTCAACCAATGACTAGCTGAATAAACAATTCTTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACATAAAAACACCCCTCTaGCTAGTTTGTTGCTGGCGT +
Preference number: 3 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNIKTPL*LVCCWR
Trigger: ACGCCAGCAACAAACTAGCAAGAGGGGTGTTTTTAT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAGCCAAATGCATCTCTaGCAAACCTTCACATCCTTC +
Preference number: 3 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLSQMHL*QTFTSF
Trigger: GAAGGATGTGAAGGTTTGCAAGAGATGCATTTGGCT...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAAAGTACATGAGGTTATaGGGCATGAGGCACAATCTT +
Preference number: 3 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLKYMRL*GMRHNL
Trigger: AAGATTGTGCCTCATGCCCAATAACCTCATGTACTT...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR-3UTR CAA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGATTGGTCTTCAACTTTaGGATTACCGTCTCACATCC +
Preference number: 3 (lower is better)
Translates to: IWITLVKQHLREQNTLPQIGLQL*DYRLTS
Trigger: GGATGTGAGACGGTAATCCAAAAGTTGAAGACCAAT...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 72 bp AGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATaGAGATCAGACTGGCCTGAAAACAAACCTAGTTTT +
Preference number: 3 (lower is better)
Translates to: SKDLQLVIDRIG*RSDWPENKPSF
Trigger: AAAACTAGGTTTGTTTTCAGGCCAGTCTGATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR GCA 72 bp AACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTaGTGTGAAGAGGATCTGAAATGTAACTTAAAGGCA +
Preference number: 3 (lower is better)
Translates to: NNQDLKGFRYVA*CEEDLKCNLKA
Trigger: TGCCTTTAAGTTACATTTCAGATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR CCA 72 bp GTGTTTGTACGTGCTAAAATGATACTGCAAGCAGAATaGGTTACCTGGACAGAAGCAAAAGAAGGAATTTGT +
Preference number: 3 (lower is better)
Translates to: VFVRAKMILQAE*VTWTEAKEGIC
Trigger: ACAAATTCCTTCTTTTGCTTCTGTCCAGGTAACCCATTCTGCTTGCAGTATCATTTTAGCACGTACAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAATAACTGCAGTTTATaGGAAATGAACTGCAGGGAA +
Preference number: 3 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTNNCSL*EMNCRE
Trigger: TTCCCTGCAGTTCATTTCCAATAAACTGCAGTTATT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR TCA 72 bp ACCACATTAACACAACTTAAATATAGAGCTATTTGGTaGCATGGGGACCCAAATTCAAGGGCTAACTTGTCA +
Preference number: 3 (lower is better)
Translates to: TTLTQLKYRAIW*HGDPNSRANLS
Trigger: TGACAAGTTAGCCCTTGAATTTGGGTCCCCATGTCACCAAATAGCTCTATATTTAAGTTGTGTTAATGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 72 bp TACCAATCATATTATTGGTGGAGCAGAACTATGCAGTaGTTCCTCATGCTGCACATAGAGAATCTATTTGCT +
Preference number: 3 (lower is better)
Translates to: YQSYYWWSRTMQ*FLMLHIENLFA
Trigger: AGCAAATAGATTCTCTATGTGCAGCATGAGGAATCACTGCATAGTTCTGCTCCACCAATAATATGATTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR TCA 72 bp CTTCCCATTTTTCTAATCTCCCTGGGAACATGTTCATaGTCAGATAAACTGTCTAATGCAAATGACTCTGGT +
Preference number: 3 (lower is better)
Translates to: LPIFLISLGTCS*SDKLSNANDSG
Trigger: ACCAGAGTCATTTGCATTAGACAGTTTATCTGATCATGAACATGTTCCCAGGGAGATTAGAAAAATGGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAATGTAGACTTTCTATTTaGACTGGCCAAAAAGCCCCA +
Preference number: 3 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNECRLSI*TGQKAP
Trigger: TGGGGCTTTTTGGCCAGTCAAAATAGAAAGTCTACA...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGTTGGAAATATTGCTTTaGCAGTCAGCACTGATTTGG +
Preference number: 3 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELLEILL*QSALIW
Trigger: CCAAATCAGTGCTGACTGCAAAAGCAATATTTCCAA...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGAGAGTTACATGGAGTTTaGTTTTGCTTCACTGAGAGT +
Preference number: 3 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRELHGV*FCFTES
Trigger: ACTCTCAGTGAAGCAAAACAAAACTCCATGTAACTC...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGAAATTCAAGGGCTAACTaGTCACATTTTATCCAGGGA +
Preference number: 3 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRNSRAN*SHFIQG
Trigger: TCCCTGGATAAAATGTGACAAGTTAGCCCTTGAATT...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR-3UTR CAA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAATTAGAAATGAGTCTCTaGTCTGCTGCCATAAACTAT +
Preference number: 3 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNELEMSL*SAAINY
Trigger: ATAGTTTATGGCAGCAGACAAGAGACTCATTTCTAA...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR GCA 72 bp TTATGTTCTTTAACATCTAACTTTGCCATGGTTTGGTaGTGTACCAATCATATTATTGGTGGAGCAGAACTA +
Preference number: 3 (lower is better)
Translates to: LCSLTSNFAMVW*CTNHIIGGAEL
Trigger: TAGTTCTGCTCCACCAATAATATGATTGGTACAGCACCAAACCATGGCAAAGTTAGATGTTAAAGAACATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CCA 72 bp ACATTATGTTCTTTAACATCTAACTTTGCCATGGTTTaGTGCTGTACCAATCATATTATTGGTGGAGCAGAA +
Preference number: 3 (lower is better)
Translates to: TLCSLTSNFAMV*CCTNHIIGGAE
Trigger: TTCTGCTCCACCAATAATATGATTGGTACAGCACCAAACCATGGCAAAGTTAGATGTTAAAGAACATAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTCTCGTCGCTCCTCCTaGGCATCATCCCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTSRRSS*ASSPSA
Trigger: GGCAGATGGGGATGATGCTCAGGAGGAGCGACGAGA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCGTGAACGATGCTCTTaGACCGGGGCTTCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTRERCS*TGASRR
Trigger: GCGACGAGAAGCCCCGGTTCAAGAGCATCGTTCACG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCCAGCCTGCACTGCGTaGACGATGCTCTTGAACCGG +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTPACTA*TMLLNR
Trigger: CCGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTGG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGGGGCTGGTGAGCCGTaGGAACGCTGTTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTGAGEP*ERCFVP
Trigger: TGGCACAAAACAGCGTTCTCACGGCTCACCAGCCCC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCCGCGCGCTGGCAGCTaGGCGCCTGGAGACAACAGC +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSPRAGS*APGDNS
Trigger: GCTGTTGTCTCCAGGCGCTCAGCTGCCAGCGCGCGG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR GCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTAGCATCATCCCCATCTaGCGCGTGAAGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTSIIPI*RVKVEA
Trigger: GGCCTCCACCTTCACGCGGCAGATGGGGATGATGCT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGGGGACCCAAGGGAATaGCTGAATTGGCGTCGTGCG +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTGDPRE*LNWRRA
Trigger: CGCACGACGCCAATTCAGCCATTCCCTTGGGTCCCC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGCGGAGATCCCTGCCTaGCCACGCTACTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTAEIPA*PRYSLS
Trigger: TGACAGAGAGTAGCGTGGCCAGGCAGGGATCTCCGC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR GCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCTTTTGCTGCTCCTCTaGGGCCAGGCGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTLLLLL*GQASLF
Trigger: GAAAAGGCTCGCCTGGCCGCAGAGGAGCAGCAAAAG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGGGGGTCGAGGGTCATaGACAATTGTTGGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTGGRGS*TIVGLG
Trigger: GCCAAGGCCAACAATTGTCCATGACCCTCGACCCCC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCGGGCGCGGAGATCCCTaGCTGGCCACGCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSGRGDP*LATLLS
Trigger: AGAGAGTAGCGTGGCCAGGCAGGGATCTCCGCGCCC...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGCGCGGAGGTTGGGCCTaGAGGTCCCCCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLRGGWA*RSPTAS
Trigger: TGAGGCTGTGGGGGACCTCCAGGCCCAACCTCCGCG...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTGGCCTTCTCCTCTTTaGGTACCTTGGCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTWPSPL*VPWPSI
Trigger: GATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCGGCGACACGTGGAGCTaGTGCTTGGGGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSGDTWS*CLGLVS
Trigger: GCTCACCAGCCCCAAGCACCAGCTCCACGTGTCGCC...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGGCACAGCATCTGACTaGATGTCACTGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTGTASD*MSLSSS
Trigger: GGATGAGCTCAGTGACATTCAGTCAGATGCTGTGCC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACACGTGAACGATGCTCTTaGACCGGGGCTTCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTRERCS*TGASRR
Trigger: GCGACGAGAAGCCCCGGTTCAAGAGCATCGTTCACG...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCGACGGGGCTGACCGGTaGGCGCGGAGATCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIDGADR*ARRSLP
Trigger: AGGCAGGGATCTCCGCGCCCACCGGTCAGCCCCGTC...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACAGCACTGCGTCTCCTGTaGGGTGTGTGGGCATCTCAG +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTALRLL*GVWASQ
Trigger: CTGAGATGCCCACACACCCCACAGGAGACGCAGTGC...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTAGAAGGCACAGCATCTaGCTGAATGTCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTRRHSI*LNVTEL
Trigger: GAGCTCAGTGACATTCAGTCAGATGCTGTGCCTTCT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCGTGAACGATGCTCTTaGACCGGGGCTTCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSRERCS*TGASRR
Trigger: GCGACGAGAAGCCCCGGTTCAAGAGCATCGTTCACG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCCAGCCTGCACTGCGTaGACGATGCTCTTGAACCGG +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSPACTA*TMLLNR
Trigger: CCGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTGG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACGCGCGTGGACGGGGCTaGCCGGTGGGCGCGGAGATC +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNARGRG*PVGAEI
Trigger: GATCTCCGCGCCCACCGGTCAGCCCCGTCCACGCGC...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR TCA 90 bp AGAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCCCAAAGCTGAGAGGATaGGTCTCCAGTTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RAHGFVCGRTIPIAVPTCPKLRG*VSSWHC
Trigger: GCAGTGCCAACTGGAGACTCATCCTCTCAGCTTTGG...GCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCGGCCACCACCGACCTaGGGAGCTGCGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHERPPPT*GAAWAS
Trigger: GGAAGCCCACGCAGCTCCGCAGGTCGGTGGTGGCCG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCAGCATCATCCCCATCTaGCGCGTGAAGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSSIIPI*RVKVEA
Trigger: GGCCTCCACCTTCACGCGGCAGATGGGGATGATGCT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTGGCCTTCTCCTCTTTaGGTACCTTGGCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAWPSPL*VPWPSI
Trigger: GATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCA...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCTTCACCAAGACTTCTaGGCTATCCAGCTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTLHQDF*AIQLWQ
Trigger: TTGCCACAGCTGGATAGCCCAGAAGTCTTGGTGAAG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR TCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTCAGGGCCTCCACAAATaGGACAAGTGCAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAQGLHK*DKCRNG
Trigger: CCCATTTCTGCACTTGTCTCATTTGTGGAGGCCCTG...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTGAAGCTCAGCTAGAATaGTGCAAGACACTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAEAQLE*CKTLAA
Trigger: GGCTGCCAGTGTCTTGCATCATTCTAGCTGAGCTTC...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCACCTGCGGAGCTGCGTaGGCTTCCGGAACCCTCACC +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDITCGAA*ASGTLT
Trigger: GGTGAGGGTTCCGGAAGCCCACGCAGCTCCGCAGGT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTGCCTCAATAACAGCTaGTGGATAGCTCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTCLNNS*WIAQSN
Trigger: GTTGGACTGAGCTATCCACCAGCTGTTATTGAGGCA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCTTTTCAATGGCTTCTaGCTGCTGCAGAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTLFNGF*LLQSSL
Trigger: AAGACTGCTCTGCAGCAGCCAGAAGCCATTGAAAAG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATGGCGACACGTGGAGCTaGTGCTTGGGGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDGDTWS*CLGLVS
Trigger: GCTCACCAGCCCCAAGCACCAGCTCCACGTGTCGCC...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCTGGCAGCTGAGCGCCTaGAGACAACAGCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIWQLSA*RQQRGP
Trigger: GGGTCCCCGCTGTTGTCTCCAGGCGCTCAGCTGCCA...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396193.5
3UTR CAA 72 bp ACAGCACCCACCCTCTCCAATTTCTCACAGTCCCCATaGCTCCTTCCTGTCTTGCTGATACAAAGGCCCACT +
Preference number: 4 (lower is better)
Translates to: TAPTLSNFSQSP*LLPVLLIQRPT
Trigger: AGTGGGCCTTTGTATCAGCAAGACAGGAAGGAGCAATGGGGACTGTGAGAAATTGGAGAGGGTGGGTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTGACATTGTCCAGCGATaGTGGAGGTCCCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHADIVQR*WRSHAF
Trigger: AAAAGCATGGGACCTCCATCATCGCTGGACAATGTC...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACACTGAACCAGAGGTCTTaGCACCTGATCGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTLNQRS*HLIAWH
Trigger: ATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAG...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGTAGGGAACATTATTTaGGGAGGCTACTACTCCCAT +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTVGNII*GGYYSH
Trigger: ATGGGAGTAGTAGCCTCCTCAAATAATGTTCCCTAC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCTCCATTTCCTTTTGCTaGTCCTCTGCGGCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSSISFC*SSAARR
Trigger: TCGCCTGGCCGCAGAGGAGCAGCAAAAGGAAATGGA...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCGACACGTGGAGCTGGTaGTTGGGGCTGGTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIDTWSW*LGLVSR
Trigger: ACGGCTCACCAGCCCCAAGCACCAGCTCCACGTGTC...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGACACGTGGAGCTGGTaGTTGGGGCTGGTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIDTWSW*LGLVSR
Trigger: ACGGCTCACCAGCCCCAAGCACCAGCTCCACGTGTC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACACGCGGAGGTTGGGCCTaGAGGTCCCCCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTRGGWA*RSPTAS
Trigger: TGAGGCTGTGGGGGACCTCCAGGCCCAACCTCCGCG...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTGTGGAAATTGTTGGTaGTTCCGGTATGCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTCGNCW*FRYARS
Trigger: ACTACGAGCATACCGGAACCACCAACAATTTCCACA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCGGCACAGCATCTGACTaGATGTCACTGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSGTASD*MSLSSS
Trigger: GGATGAGCTCAGTGACATTCAGTCAGATGCTGTGCC...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCTCTCGTCGCTCCTCCTaGGCATCATCCCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDISRRSS*ASSPSA
Trigger: GGCAGATGGGGATGATGCTCAGGAGGAGCGACGAGA...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTAATGAAACCTACTTGTaGCTGAGCAACCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTNETYL*LSNHSG
Trigger: TCCACTATGGTTGCTCAGTCACAAGTAGGTTTCATT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCTGAACCAGAGGTCTTaGCACCTGATCGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSLNQRS*HLIAWH
Trigger: ATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCGTGTTCCATTGACTTaGTTCTTAGTTTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTRVPLT*FLVSPD
Trigger: GTCTGGAGAAACTAAGAATCAAGTCAATGGAACACG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCGGTGCTTGGGGCTGGTaGGCCGTGAGAACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIGAWGW*AVRTLF
Trigger: AAACAGCGTTCTCACGGCTCACCAGCCCCAAGCACC...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTGGATGGCTAATATCTaGTGTATGCAGCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTWMANI*CMQHKG
Trigger: TCCCTTATGCTGCATACAGCAGATATTAGCCATCCA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTAAGTCACCATTCTGTTaGTGTTCTCCTGATGACTTC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTKSPFC*CSPDDF
Trigger: GAAGTCATCAGGAGAACAGCAACAGAATGGTGACTT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCCTTGGAGGTGTGTCCTaGTGTGGCCAGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDILGGVS*CGQWVL
Trigger: CAGCACCCACTGGCCACAGCAGGACACACCTCCAAG...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCCTTGGAGGTGTGTCCTaGTGTGGCCAGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKILGGVS*CGQWVL
Trigger: CAGCACCCACTGGCCACAGCAGGACACACCTCCAAG...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGCCAAATGCATCTCTTaGAAACCTTCACATCCTTCA +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTAKCIS*KPSHPS
Trigger: TGAAGGATGTGAAGGTTTGCAAGAGATGCATTTGGC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTCAGCCATGAGATGTTaGCGAAGTTTACTCCAAACA +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTSAMRC*RSLLQT
Trigger: TGTTTGGAGTAAACTTCGGCAACATCTCATGGCTGA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGAGGAGCCGTCGCGACTaGCCCATCTCCAAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMRSRRD*PISKPS
Trigger: ACTCGGCTTGGAGATGGGGCAGTCGCGACGGCTCCT...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR GCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATAGCCCTCCTTCCTGTTaGCGGCGTCCGTCATGGCTC +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNSPPSC*RRPSWL
Trigger: GAGCCATGACGGACGCCGGCAACAGGAAGGAGGGCT...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR GCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACATTCCCAAGCTATTTCTaGCTCCCCATCTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTFPSYF*LPIYPQ
Trigger: CTGGGGATAGATGGGGAGGCAGAAATAGCTTGGGAA...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAGGCTTCGCGGAGGTTaGGCCTGGAGGTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTRLRGG*AWRSPT
Trigger: TGTGGGGGACCTCCAGGCCCAACCTCCGCGAAGCCT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR CCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTGTCAGCGCCCGGGCTaGTGTCTGGGCTGTCACCGC +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLCQRPG*CLGCHR
Trigger: GCGGTGACAGCCCAGACACCAGCCCGGGCGCTGACA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGGCGACACGTGGAGCTaGTGCTTGGGGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTGDTWS*CLGLVS
Trigger: GCTCACCAGCCCCAAGCACCAGCTCCACGTGTCGCC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTTTGTAGGGCTGTCCTaGAGAGTTCATCCTGATTAT +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTFVGLS*RVHPDY
Trigger: ATAATCAGGATGAACTCTCCAGGACAGCCCTACAAA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATTCCGTCTCTGGTGGCTaGGGGGATTTGGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDSVSGG*GDLGTQ
Trigger: TTGGGTCCCCAAATCCCCCCAGCCACCAGAGACGGA...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGTCTCGTCGCTCCTCCTaGGCATCATCCCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMSRRSS*ASSPSA
Trigger: GGCAGATGGGGATGATGCTCAGGAGGAGCGACGAGA...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCAGTCTTCATTGCTTTaGTTTGTTGGAAGTGACAAG +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTQSSLL*FVGSDK
Trigger: CTTGTCACTTCCAACAAATCAAAGCAATGAAGACTG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGGGGGCTGGTGAGCCGTaGGAACGCTGTTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMGAGEP*ERCFVP
Trigger: TGGCACAAAACAGCGTTCTCACGGCTCACCAGCCCC...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGGGTGCTTGGGGCTGGTaGGCCGTGAGAACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEGAWGW*AVRTLF
Trigger: AAACAGCGTTCTCACGGCTCACCAGCCCCAAGCACC...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AGAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCATATTCACCTCTAGGTaGCTCACCTTGCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: RAHGFVCGRTIPIAVPTCIFTSR*LTLLWV
Trigger: TACCCAAAGCAAGGTGAGTCACCTAGAGGTGAATAT...GCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACACCGACCTGCGGAGCTaGGTGGGCTTCCGGAACCCT +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNTDLRS*VGFRNP
Trigger: AGGGTTCCGGAAGCCCACGCAGCTCCGCAGGTCGGT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR GCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCTAATATCTGCTGTATaGAGCATAAGGGATAAGGCT +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTLISAV*SIRDKA
Trigger: AGCCTTATCCCTTATGCTGCATACAGCAGATATTAG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCTCTCCCGATTGATGTaGACCACTTCCGTCCAAGTA +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSLSRLM*TTSVQV
Trigger: TACTTGGACGGAAGTGGTGCACATCAATCGGGAGAG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCCTTTTGCTGCTCCTCTaGGGCCAGGCGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDILLLLL*GQASLF
Trigger: GAAAAGGCTCGCCTGGCCGCAGAGGAGCAGCAAAAG...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTGGTCTCAAGGGGGCTaGAATGTTATTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAWSQGG*NVILFP
Trigger: TGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCA...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACAGGGTTAATCCACTTCTaGTTGGGAACAGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTGLIHF*LGTEAR
Trigger: TCTGGCTTCTGTTCCCAAGCAGAAGTGGATTAACCC...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACATGCCTCAATAACAGCTaGTGGATAGCTCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTCLNNS*WIAQSN
Trigger: GTTGGACTGAGCTATCCACCAGCTGTTATTGAGGCA...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTGAATGTGGAAATTGTTaGTGGTTCCGGTATGCTCGT +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAECGNC*WFRYAR
Trigger: ACGAGCATACCGGAACCACCAACAATTTCCACATTC...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATAGGTGTGTCCTGCTGTaGCCAGTGGGTGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDRCVLL*PVGAEK
Trigger: CTTCTCAGCACCCACTGGCCACAGCAGGACACACCT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCAGGTGTGTCCTGCTGTaGCCAGTGGGTGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIRCVLL*PVGAEK
Trigger: CTTCTCAGCACCCACTGGCCACAGCAGGACACACCT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATAGCCTCCAAGGGTCTTaGAGGTGTGTCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDSLQGS*RCVLLW
Trigger: CCACAGCAGGACACACCTCCAAGACCCTTGGAGGCT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCAGCCTCCAAGGGTCTTaGAGGTGTGTCCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDISLQGS*RCVLLW
Trigger: CCACAGCAGGACACACCTCCAAGACCCTTGGAGGCT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCAGGGAATGGCTGAATTaGCGTCGTGCGTCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSREWLN*RRASSR
Trigger: TCTAGAAGACGCACGACGCCAATTCAGCCATTCCCT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACATGTTGGGGAACATTTTaGCAAGGCAAAGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTCWGTF*QGKGPG
Trigger: TCCTGGACCTTTGCCTTGCCAAAATGTTCCCCAACA...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCCTCATGAAGAATACGTaGCTGAAGCTGACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: RAHGFVCGRTIPIAVPTCLMKNT*LKLTKA
Trigger: AGCTTTGGTCAGCTTCAGCCACGTATTCTTCATGAG...GCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CAA 72 bp GCTCAAATTCAGTTGCTGCCTACCAACTACCCTGTTTaGACAGCACCCACCCTCTCCAATTTCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: AQIQLLPTNYPV*TAPTLSNFSQS
Trigger: GGACTGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGCAACTGAATTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGCCAGCCTGCACTGCGTaGACGATGCTCTTGAACCGG +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLPACTA*TMLLNR
Trigger: CCGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTGG...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCCTCTGTCACCCTGTCTaGAGAACTCCTCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKILCHPV*RTPPGV
Trigger: CACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAG...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCCTCTGTCACCCTGTCTaGAGAACTCCTCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDILCHPV*RTPPGV
Trigger: CACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAG...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCTGGCATCTGACGAGCTaGTGCTATTCAAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSWHLTS*CYSNSN
Trigger: GTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCA...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATACCCAAGGGAATGGCTaGATTGGCGTCGTGCGTCTT +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDTQGNG*IGVVRL
Trigger: AAGACGCACGACGCCAATTCAGCCATTCCCTTGGGT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR TCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACAAAACTGACTGAGAAATaGTCCTGCAGGTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTKLTEK*SCRFRS
Trigger: GCTTCTGAACCTGCAGGATCATTTCTCAGTCAGTTT...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACACAGCTAGTCATTGGTTaGGGTTTGGGTTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTQLVIG*GLGFGS
Trigger: AGAACCAAAACCCAAACCTCAACCAATGACTAGCTG...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAGCATCATCCCCATCTaGCGCGTGAAGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTSIIPI*RVKVEA
Trigger: GGCCTCCACCTTCACGCGGCAGATGGGGATGATGCT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AGAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTGGATGGCTAATATCTaGTGTATGCAGCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: RAHGFVCGRTIPIAVPTCWMANI*CMQHKG
Trigger: TCCCTTATGCTGCATACAGCAGATATTAGCCATCCA...GCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGAAAATGAAGCCAAATaGATCTCTTGCAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTENEAK*ISCKPS
Trigger: TGAAGGTTTGCAAGAGATGCATTTGGCTTCATTTTC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGCTAGTGTCACCTCTGTaGCCACTAGTGTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLLVSPL*PLVSLV
Trigger: CACCAAAGACACTAGTGGGCACAGAGGTGACACTAG...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGAGGCTTCGCGGAGGTTaGGCCTGGAGGTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVRLRGG*AWRSPT
Trigger: TGTGGGGGACCTCCAGGCCCAACCTCCGCGAAGCCT...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTATTATACAGAATAGCTaGATCAGACCGAGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTIIQNS*IRPSLN
Trigger: ATTCAGACTCGGTCTGATCCAGCTATTCTGTATAAT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCTGGCCTTCTCCTCTTTaGGTACCTTGGCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIWPSPL*VPWPSI
Trigger: GATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCA...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCATGACTTCTCGGCTTTaGAGTTTTTCCCACGAGGGT +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSMTSRL*SFSHEG
Trigger: ACCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCAT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCAGGCTACTACTCCCATaGGCCTCCTCAGTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIRLLLP*ASSVCS
Trigger: GCTACACACTGAGGAGGCCCATGGGAGTAGTAGCCT...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCAGGCTACTACTCCCATaGGCCTCCTCAGTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIRLLLP*ASSVCS
Trigger: GCTACACACTGAGGAGGCCCATGGGAGTAGTAGCCT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCTGTTCCCCAGGAACATaGCTTCCAACATCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSCSPGT*LPTSRS
Trigger: GCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACA...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCAGCGGGCCAGTGGTCTaGCATTCTTGTCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKISGPVV*HSCLQL
Trigger: AAGCTGGAGACAAGAATGCCAGACCACTGGCCCGCT...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCAGAGAAGCGGGCCAGTaGTCTGGCATTCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIREAGQ*SGILVS
Trigger: GGAGACAAGAATGCCAGACCACTGGCCCGCTTCTCT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACATTCAATCTCCTTGGTTaGCGACTCCATAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTFNLLG*RLHSST
Trigger: TGTTGAGCTATGGAGTCGCCAACCAAGGAGATTGAA...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCGTGTTCCAAACACTGTaGTGGGCCAGCACTGCGTCT +
Preference number: 4 (lower is better)
Translates to: RDWNHHLCGDECQHGCIIVFQTL*WASTAS
Trigger: AGACGCAGTGCTGGCCCACCACAGTGTTTGGAACAC...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTTTTCCATTCATATATaGCCAGTGCCCTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAFSIHI*PVPSSG
Trigger: TCCTGATGAGGGCACTGGCCATATATGAATGGAAAA...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCGAGAAAACTGACAAGTaGGAAAAGTCGTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSEKTDK*EKSSVS
Trigger: GCTGACAGACGACTTTTCTCACTTGTCAGTTTTCTC...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR TCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGTCTCGTCGCTCCTCCTaGGCATCATCCCCATCTGCC +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQSRRSS*ASSPSA
Trigger: GGCAGATGGGGATGATGCTCAGGAGGAGCGACGAGA...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCCAGCCTGCACTGCGTaGACGATGCTCTTGAACCGG +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNPACTA*TMLLNR
Trigger: CCGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTGG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATCTGAACCAGAGGTCTTaGCACCTGATCGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDLNQRS*HLIAWH
Trigger: ATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAG...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCCTGAACCAGAGGTCTTaGCACCTGATCGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDILNQRS*HLIAWH
Trigger: ATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAG...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTCCATCTCTCCCGATTaGTGTGCACCACTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNSISPD*CAPLPS
Trigger: GGACGGAAGTGGTGCACATCAATCGGGAGAGATGGA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCGGTGCTTGGGGCTGGTaGGCCGTGAGAACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLGAWGW*AVRTLF
Trigger: AAACAGCGTTCTCACGGCTCACCAGCCCCAAGCACC...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACAGAAAACAAATGTTCCTaGCTCAGGAAAGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTENKCS*LRKGTR
Trigger: TCTGGTTCCTTTCCTGAGTCAGGAACATTTGTTTTC...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTACAAAGGCCCACTATaGATTGCCATTTACCACAAT +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAYKGPL*IAIYHN
Trigger: ATTGTGGTAAATGGCAATTCATAGTGGGCCTTTGTA...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCATGATGGAGGTCCCATaGTTTTGCTGGATGGCTAAT +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSMMEVP*FCWMAN
Trigger: ATTAGCCATCCAGCAAAAGCATGGGACCTCCATCAT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGTCCATTTCCTTTTGCTaGTCCTCTGCGGCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMSISFC*SSAARR
Trigger: TCGCCTGGCCGCAGAGGAGCAGCAAAAGGAAATGGA...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCTCTTTTTCTCAGCTTTaGCAGATGCGCCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSSFSQL*QMRLLQ
Trigger: CTGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGA...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATAACCAGGATAGTACCTaGTCCAACAGCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDNQDST*SNSLQG
Trigger: CCCTTGGAGGCTGTTGGAGCAGGTACTATCCTGGTT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTCAGTGGCACAATTCTTaGTTAATTCAGACATTCCTG +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAQWHNS*LIQTFL
Trigger: CAGGAATGTCTGAATTAAGCAAGAATTGTGCCACTG...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAGCACTGCCTCTGGCCTaGAACAGCCAGCATTCACCC +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIALPLA*NSQHSP
Trigger: GGGTGAATGCTGGCTGTTGCAGGCCAGAGGCAGTGC...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAGTCTCCAGTTGGCACTaGCTCTGGCCTGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIVSSWH*LWPATA
Trigger: GGCTGTTGCAGGCCAGAGGCAGTGCCAACTGGAGAC...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTAAAGACCGTAATCTCTaGGACGTTTTCTTATATTTC +
Preference number: 4 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTKDRNL*DVFLYF
Trigger: GAAATATAAGAAAACGTCCCAGAGATTACGGTCTTT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR CCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGCTTTTCAATGGCTTCTaGCTGCTGCAGAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLLFNGF*LLQSSL
Trigger: AAGACTGCTCTGCAGCAGCCAGAAGCCATTGAAAAG...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCCTTTACAATCAAGCCTaGAAGGTCGAGGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDILYNQA*KVEAIR
Trigger: CCGGATGGCCTCGACCTTCCAGGCTTGATTGTAAAG...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCAGAAGGCACAGCATCTaGCTGAATGTCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIRRHSI*LNVTEL
Trigger: GAGCTCAGTGACATTCAGTCAGATGCTGTGCCTTCT...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCAGTCCAACCATGTTTaGTGTCCGTCTATACATTCT +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSQSNHV*CPSIHS
Trigger: AGAATGTATAGACGGACATCAAACATGGTTGGACTG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCAGGGCCTCCACAAATaGGACAAGTGCAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEQGLHK*DKCRNG
Trigger: CCCATTTCTGCACTTGTCTCATTTGTGGAGGCCCTG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGCAGGGCCTCCACAAATaGGACAAGTGCAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMQGLHK*DKCRNG
Trigger: CCCATTTCTGCACTTGTCTCATTTGTGGAGGCCCTG...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGACATTGTCCAGCGATaGTGGAGGTCCCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIDIVQR*WRSHAF
Trigger: AAAAGCATGGGACCTCCATCATCGCTGGACAATGTC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCGCAGGGCGTTTAAAATaGCGCAAAGGAGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIAGRLK*RKGGLM
Trigger: CATCAAGCCTCCTTTGCGTCATTTTAAACGCCCTGC...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCTTCCACCAACAACTGTaGGAACAATCAGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSFHQQL*EQSGSQ
Trigger: TTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAA...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCCAAACCCCTCAGCCATaGGATGTTGCCGAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIQTPQP*DVAEVY
Trigger: GTAAACTTCGGCAACATCTCATGGCTGAGGGGTTTG...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR TCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACATGTAGCCATCGATGCTaGAAGTGGCGCTCCGGCATT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTCSHRC*KWRSGI
Trigger: AATGCCGGAGCGCCACTTTCAGCATCGATGGCTACA...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCCACAGACAGTTCTGTaGCTTAGACCGAGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEPQTVL*LRPREA
Trigger: CGCTTCTCTCGGTCTAAGTCACAGAACTGTCTGTGG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGCTTTATTCATTTACTTaGCCTGCTAGGCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLLYSFT*PARPLK
Trigger: CTTCAGGGGCCTAGCAGGTCAAGTAAATGAATAAAG...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGTCAGGGGAGACTGAATaGGTGTGCCCTGAGCGAACT +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLSGETE*VCPERT
Trigger: AGTTCGCTCAGGGCACACTCATTCAGTCTCCCCTGA...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATTATCCCAGCCTGCACTaGGTGAACGATGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDYPSLH*VNDALE
Trigger: TTCAAGAGCATCGTTCACGCAGTGCAGGCTGGGATA...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCTTTTGCTGCTCCTCTaGGGCCAGGCGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNLLLLL*GQASLF
Trigger: GAAAAGGCTCGCCTGGCCGCAGAGGAGCAGCAAAAG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCGTTGTCACTTTTGTTTaGCCGTGTTCCATTGACTTG +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSVVTFV*PCSIDL
Trigger: CAAGTCAATGGAACACGGGCAAACAAAAGTGACAAC...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGAACCAGGATAGTACCTaGTCCAACAGCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMNQDST*SNSLQG
Trigger: CCCTTGGAGGCTGTTGGAGCAGGTACTATCCTGGTT...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACATGTGTGAGTAGGGTATaGCTGCATATACTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTCVSRV*LHILRR
Trigger: TCTTCTAAGTATATGCAGGCATACCCTACTCACACA...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGGTCCAGGTCATCCACTaGACAATCGTTCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLVQVIH*TIVPCL
Trigger: TAAACAAGGAACGATTGTGCAGTGGATGACCTGGAC...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACACTTTCCCATACGAATTaGATGGAACAAGGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTLSHTN*MEQGAF
Trigger: AAAAGCACCTTGTTCCATGCAATTCGTATGGGAAAG...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACAGGTGTGTCCTGCTGTaGCCAGTGGGTGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNRCVLL*PVGAEK
Trigger: CTTCTCAGCACCCACTGGCCACAGCAGGACACACCT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGTTTGTTGCTGGCGTCTaGGCTGATCCCACATACAGC +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEFVAGV*ADPTYS
Trigger: GCTGTATGTGGGATCAGCCCAGACGCCAGCAACAAA...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATCTTTACAATCAAGCCTaGAAGGTCGAGGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNLYNQA*KVEAIR
Trigger: CCGGATGGCCTCGACCTTCCAGGCTTGATTGTAAAG...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATTTCAATCTCCTTGGTTaGCGACTCCATAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDFNLLG*RLHSCR
Trigger: CCTGCAGCTATGGAGTCGCCAACCAAGGAGATTGAA...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396191.6
CDS-3UTR CCA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTGGCACAAATAAAATATaGAACAAAGGCCTCGATAAG +
Preference number: 4 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHAGTNKI*NKGLDK
Trigger: CTTATCGAGGCCTTTGTTCCATATTTTATTTGTGCC...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGGATGGCAGCCCAGGCTaGGTGCAAGTACAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLDGSPG*VQVQLV
Trigger: CACTAACTGTACTTGCACCCAGCCTGGGCTGCCATC...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CAA 72 bp AGAGACTTATACCATAAAAACACCCCTCTTGCTAGTTaGTTGCTGGCGTCTGGGCTGATCCCACATACAGCA +
Preference number: 4 (lower is better)
Translates to: RDLYHKNTPLAS*LLASGLIPHTA
Trigger: TGCTGTATGTGGGATCAGCCCAGACGCCAGCAACAAACTAGCAAGAGGGGTGTTTTTATGGTATAAGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGGATCAGACCGAGTCTaGATGTGGAAATTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIGSDRV*MWKLLV
Trigger: CACCAACAATTTCCACATTCAGACTCGGTCTGATCC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACTCTGTCACCCTGTCTaGAGAACTCCTCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLLCHPV*RTPPGV
Trigger: CACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGCTCTGTCACCCTGTCTaGAGAACTCCTCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQLCHPV*RTPPGV
Trigger: CACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAG...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGAATGAAACCTACTTGTaGCTGAGCAACCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLNETYL*LSNHSG
Trigger: TCCACTATGGTTGCTCAGTCACAAGTAGGTTTCATT...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCTGGCATCTGACGAGCTaGTGCTATTCAAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIWHLTS*CYSNSN
Trigger: GTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCA...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTATCCATCTCTCCCGATTaGTGTGCACCACTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLSISPD*CAPLPS
Trigger: GGACGGAAGTGGTGCACATCAATCGGGAGAGATGGA...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCTTTCCGATGTTAGAGTaGTCCTTCTTGTCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSFPMLE*SFLSVL
Trigger: TAAGACAGACAAGAAGGATCACTCTAACATCGGAAA...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCCAGTGTGTAGCCAAATaGCTTTGTACAGCAAGCGCT +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIQCVAK*LCTASA
Trigger: AGCGCTTGCTGTACAAAGTCATTTGGCTACACACTG...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCGTGTTTCCTGAATGCTaGCCGTGTTCCAAACACTGT +
Preference number: 4 (lower is better)
Translates to: RDWNHHLCGDECQHGCIIVFPEC*PCSKHC
Trigger: ACAGTGTTTGGAACACGGTCAGCATTCAGGAAACAC...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGGCAAAGACTATACAATaGTGTGTCTCCAGGACAATC +
Preference number: 4 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLAKTIQ*CVSRTI
Trigger: GATTGTCCTGGAGACACATCATTGTATAGTCTTTGC...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGAAGCATCATCCCCATCTaGCGCGTGAAGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRSIIPI*RVKVEA
Trigger: GGCCTCCACCTTCACGCGGCAGATGGGGATGATGCT...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGTATCCCAGCCTGCACTaGGTGAACGATGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEYPSLH*VNDALE
Trigger: TTCAAGAGCATCGTTCACGCAGTGCAGGCTGGGATA...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCAGAGCAGTCTTCATTaGTTTGATTTGTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSQSSLH*FDLLEV
Trigger: CACTTCCAACAAATCAAAGCAATGAAGACTGCTCTG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCTCAATGGCTTCTGGCTaGTGCAGAGCAGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKISMASG*CRAVFI
Trigger: AATGAAGACTGCTCTGCAGCAGCCAGAAGCCATTGA...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCTAATATCTGCTGTATaGAGCATAAGGGATAAGGCT +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSLISAV*SIRDKA
Trigger: AGCCTTATCCCTTATGCTGCATACAGCAGATATTAG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGAGGTCCCATGCTTTTaGTGGATGGCTAATATCTGC +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIEVPCF*WMANIC
Trigger: GCAGATATTAGCCATCCAGCAAAAGCATGGGACCTC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATGAGGTCCCATGCTTTTaGTGGATGGCTAATATCTGC +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDEVPCF*WMANIC
Trigger: GCAGATATTAGCCATCCAGCAAAAGCATGGGACCTC...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCTCTCCCGATTGATGTaGACCACTTCCGTCCAAGTA +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHELSRLM*TTSVQV
Trigger: TACTTGGACGGAAGTGGTGCACATCAATCGGGAGAG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGCTTTTGCTGCTCCTCTaGGGCCAGGCGAGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVLLLLL*GQASLF
Trigger: GAAAAGGCTCGCCTGGCCGCAGAGGAGCAGCAAAAG...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATATCCATTTCCTTTTGCTaGTCCTCTGCGGCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLISISFC*SSAARR
Trigger: TCGCCTGGCCGCAGAGGAGCAGCAAAAGGAAATGGA...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AGAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTTGCCATGGTTTGGTaGTGTACCAATCATATTATT +
Preference number: 4 (lower is better)
Translates to: RAHGFVCGRTIPIAVPTCFAMVW*CTNHII
Trigger: AATAATATGATTGGTACAGCACCAAACCATGGCAAA...GCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGTTCAATCTCCTTGGTTaGCGACTCCATAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEFNLLG*RLHSSS
Trigger: GCTGCTGCTATGGAGTCGCCAACCAAGGAGATTGAA...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR CCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATCTTTTCAATGGCTTCTaGCTGCTGCAGAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDLFNGF*LLQSSL
Trigger: AAGACTGCTCTGCAGCAGCCAGAAGCCATTGAAAAG...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATCTTTTGGCTTTTCAATaGCTTCTGGCTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDLLAFQ*LLAAAE
Trigger: CTCTGCAGCAGCCAGAAGCCATTGAAAAGCCAAAAG...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTATGGCCTTCTCCTCTTTaGGTACCTTGGCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLWPSPL*VPWPSI
Trigger: GATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCA...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATATGACTTCTCGGCTTTaGAGTTTTTCCCACGAGGGT +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDMTSRL*SFSHEG
Trigger: ACCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCAT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAGGAGGCTTGATGACTaGCAACGTAAGGCGACACGT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTRRLDD*QRKATR
Trigger: ACGTGTCGCCTTACGTTGCCAGTCATCAAGCCTCCT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCAATTTTACACCCTCTTaGCCTAGGACCACAAAATCA +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSNFTPS*PRTTKS
Trigger: TGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACACTTTACAATCAAGCCTaGAAGGTCGAGGCCATCCGG +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTLYNQA*KVEAIR
Trigger: CCGGATGGCCTCGACCTTCCAGGCTTGATTGTAAAG...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCTGTTCCCCAGGAACATaGCTTCCAACATCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDICSPGT*LPTSRS
Trigger: GCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACA...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACATTGACAGTCATAAAATaGCAATTACTGTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTLTVIK*QLLCVW
Trigger: CCACACACACAGTAATTGCCATTTTATGACTGTCAA...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CAA 72 bp GACTTATACCATAAAAACACCCCTCTTGCTAGTTTGTaGCTGGCGTCTGGGCTGATCCCACATACAGCAATT +
Preference number: 4 (lower is better)
Translates to: DLYHKNTPLASL*LASGLIPHTAI
Trigger: AATTGCTGTATGTGGGATCAGCCCAGACGCCAGCAACAAACTAGCAAGAGGGGTGTTTTTATGGTATAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
3UTR CAA 72 bp CACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTaGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HFTCTPLDPTCN*VSRGLQCYSLS
Trigger: GGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGACAAGCGAGAAAACTaGCAAGTGAGAAAAGTCGTC +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIDKREN*QVRKVV
Trigger: GACGACTTTTCTCACTTGTCAGTTTTCTCGCTTGTC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR TCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAGAAGGCACAGCATCTaGCTGAATGTCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTRRHSI*LNVTEL
Trigger: GAGCTCAGTGACATTCAGTCAGATGCTGTGCCTTCT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGACATTGTCCAGCGATaGTGGAGGTCCCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTDIVQR*WRSHAF
Trigger: AAAAGCATGGGACCTCCATCATCGCTGGACAATGTC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGCATTTGCAACTATGGTaGAGCTGTAGCCATCGATGC +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMHLQLW*SCSHRC
Trigger: GCATCGATGGCTACAGCTTCACCATAGTTGCAAATG...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGATTAGCAAAGGATTTTaGGGATGCCCCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLISKGF*GCPFMF
Trigger: AAACATGAAGGGGCATCCTCAAAATCCTTTGCTAAT...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATACAATGCCCCATGGATTaGATGCAGCTCACAGGCATG +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIQCPMD*MQLTGM
Trigger: CATGCCTGTGAGCTGCATTCAATCCATGGGGCATTG...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCAAGGATTTTTGTGCTTaGTGTATCCCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIKDFCA*CIPLPG
Trigger: CCCTGGAAGTGGGATACAGCAAGCACAAAAATCCTT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATATGATGGAGGTCCCATaGTTTTGCTGGATGGCTAAT +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDMMEVP*FCWMAN
Trigger: ATTAGCCATCCAGCAAAAGCATGGGACCTCCATCAT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCATGATGGAGGTCCCATaGTTTTGCTGGATGGCTAAT +
Preference number: 4 (lower is better)
Translates to: RDWNHHLCGDECQHGCIIMMEVP*FCWMAN
Trigger: ATTAGCCATCCAGCAAAAGCATGGGACCTCCATCAT...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACACTCTCCCGATTGATGTaGACCACTTCCGTCCAAGTA +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTLSRLM*TTSVQV
Trigger: TACTTGGACGGAAGTGGTGCACATCAATCGGGAGAG...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATTCTTTTTCTCAGCTTTaGCAGATGCGCCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDSFSQL*QMRLLQ
Trigger: CTGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGA...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCTGCATAGGAGCTAGATaGGTAAGCAGGGCGTTTAAA +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKICIGAR*VSRAFK
Trigger: TTTAAACGCCCTGCTTACGCATCTAGCTCCTATGCA...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATTGCATAGGAGCTAGATaGGTAAGCAGGGCGTTTAAA +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDCIGAR*VSRAFK
Trigger: TTTAAACGCCCTGCTTACGCATCTAGCTCCTATGCA...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACCAGGATAGTACCTaGTCCAACAGCCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLNQDST*SNSLQG
Trigger: CCCTTGGAGGCTGTTGGAGCAGGTACTATCCTGGTT...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCCAGGGAGCAAAGAATTaGAATCGCCTCCTTAACGAA +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIQGAKN*NRLLNE
Trigger: TTCGTTAAGGAGGCGATTGCAATTCTTTGCTCCCTG...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACTTCATATATGGCCAGTaGCCTCATCAGGAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYFIYGQ*PHQERA
Trigger: GGCTCTTTCCTGATGAGGGCACTGGCCATATATGAA...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGTGCCTCAATAACAGCTaGTGGATAGCTCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMCLNNS*WIAQSN
Trigger: GTTGGACTGAGCTATCCACCAGCTGTTATTGAGGCA...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCTGTGGAAATTGTTGGTaGTTCCGGTATGCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: RDWNHHLCGDECQHGCIICGNCW*FRYARS
Trigger: ACTACGAGCATACCGGAACCACCAACAATTTCCACA...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGAATGTGGAAATTGTTaGTGGTTCCGGTATGCTCGT +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIECGNC*WFRYAR
Trigger: ACGAGCATACCGGAACCACCAACAATTTCCACATTC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCGACAAGACATATCTGTaGCCATCACCATTTCAATTA +
Preference number: 4 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSDKTYL*PSPFQL
Trigger: TAATTGAAATGGTGATGGCCACAGATATGTCTTGTC...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGCTTTTCAATGGCTTCTaGCTGCTGCAGAGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMLFNGF*LLQSSL
Trigger: AAGACTGCTCTGCAGCAGCCAGAAGCCATTGAAAAG...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGCTTTTGGCTTTTCAATaGCTTCTGGCTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMLLAFQ*LLAAAE
Trigger: CTCTGCAGCAGCCAGAAGCCATTGAAAAGCCAAAAG...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCGTCCCATGCTTTTGCTaGATGGCTAATATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIVPCFC*MANICC
Trigger: ACAGCAGATATTAGCCATCCAGCAAAAGCATGGGAC...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGTCCCATGCTTTTGCTaGATGGCTAATATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIVPCFC*MANICC
Trigger: ACAGCAGATATTAGCCATCCAGCAAAAGCATGGGAC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACAGGAGGCTTGATGACTaGCAACGTAAGGCGACACGT +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNRRLDD*QRKATR
Trigger: ACGTGTCGCCTTACGTTGCCAGTCATCAAGCCTCCT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTTGTTGCTGGCGTCTaGGCTGATCCCACATACAGC +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNFVAGV*ADPTYS
Trigger: GCTGTATGTGGGATCAGCCCAGACGCCAGCAACAAA...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATAAGCACATCAACAGATaGAAAGGCAAACCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNKHINR*KGKPLS
Trigger: GCTGAGGGGTTTGCCTTTCCATCTGTTGATGTGCTT...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CCA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGAATCTGGTTGTACAGTaGGCACAAGAGCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLNLVVQ*AQELIK
Trigger: TTTTATCAGCTCTTGTGCCCACTGTACAACCAGATT...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCATACTGCAAGCAGAATaGGTTACCTGGACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RDWNHHLCGDECQHGCIIILQAE*VTWTEA
Trigger: TGCTTCTGTCCAGGTAACCCATTCTGCTTGCAGTAT...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATGTCATGGATGGCAGCTaGGAAGATTATAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDVMDGS*EDYSKD
Trigger: ATCTTTGCTATAATCTTCTCAGCTGCCATCCATGAC...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGGCTGCACTTAAATGGTaGTTCTCCAGTACAGATCTG +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEAALKW*FSSTDL
Trigger: CAGATCTGTACTGGAGAATCACCATTTAAGTGCAGC...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCGACATTGTCCAGCGATaGTGGAGGTCCCATGCTTTT +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLDIVQR*WRSHAF
Trigger: AAAAGCATGGGACCTCCATCATCGCTGGACAATGTC...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTTCCATCTCTCCCGATTaGTGTGCACCACTTCCGTCC +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALSISPD*CAPLPS
Trigger: GGACGGAAGTGGTGCACATCAATCGGGAGAGATGGA...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAGCAGGGCGTTTAAAATaGCGCAAAGGAGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLAGRLK*RKGGLM
Trigger: CATCAAGCCTCCTTTGCGTCATTTTAAACGCCCTGC...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACGCAGGGCGTTTAAAATaGCGCAAAGGAGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNAGRLK*RKGGLM
Trigger: CATCAAGCCTCCTTTGCGTCATTTTAAACGCCCTGC...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATATAGACAGAATAGGATaGAGATCAGACTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDIDRIG*RSDWPE
Trigger: TTCAGGCCAGTCTGATCTTCATCCTATTCTGTCTAT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACACAGTGTGTAGCCAAATaGCTTTGTACAGCAAGCGCT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTQCVAK*LCTASA
Trigger: AGCGCTTGCTGTACAAAGTCATTTGGCTACACACTG...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATGTAGGGAACATTATTTaGGGAGGCTACTACTCCCAT +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNVGNII*GGYYSH
Trigger: ATGGGAGTAGTAGCCTCCTCAAATAATGTTCCCTAC...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCCAAAGACCGTAATCTaGAGGATGTCTTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEPKTVI*RMSSPR
Trigger: TCTTGGTGAAGACATCCTTCAGATTACGGTCTTTGG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR TCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGACCAACTACCCTGTTTTaGCAGCACCCACCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRPTTLF*QHPPSP
Trigger: TGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGG...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGGAAGCTGACCAAAGCTaGGAGGATGAGTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQEADQS*EDESPV
Trigger: AACTGGAGACTCATCCTCTCAGCTTTGGTCAGCTTC...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTCGATCTGTTCCGGTTaGAGGTATTTCAGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNSICSG*RYFREL
Trigger: CAACTCTCTGAAATACCTGCAACCGGAACAGATCGA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR GCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGTCGATCTGTTCCGGTTaGAGGTATTTCAGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMSICSG*RYFREL
Trigger: CAACTCTCTGAAATACCTGCAACCGGAACAGATCGA...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR GCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTATCCCAGCCTGCACTaGGTGAACGATGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNYPSLH*VNDALE
Trigger: TTCAAGAGCATCGTTCACGCAGTGCAGGCTGGGATA...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGAAAATAAATTTCAGTaGATGATCCCCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIENKFQ*MIPTGL
Trigger: GAGGCCAGTGGGGATCATGCACTGAAATTTATTTTC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCGAAAATAAATTTCAGTaGATGATCCCCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIENKFQ*MIPTGL
Trigger: GAGGCCAGTGGGGATCATGCACTGAAATTTATTTTC...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACAAGGATTTTTGTGCTTaGTGTATCCCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYKDFCA*CIPLPG
Trigger: CCCTGGAAGTGGGATACAGCAAGCACAAAAATCCTT...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATAAGGATTTTTGTGCTTaGTGTATCCCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNKDFCA*CIPLPG
Trigger: CCCTGGAAGTGGGATACAGCAAGCACAAAAATCCTT...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACATCAATGGCTTCTGGCTaGTGCAGAGCAGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTSMASG*CRAVFI
Trigger: AATGAAGACTGCTCTGCAGCAGCCAGAAGCCATTGA...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATTGGATGGCTAATATCTaGTGTATGCAGCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDWMANI*CMQHKG
Trigger: TCCCTTATGCTGCATACAGCAGATATTAGCCATCCA...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGATGATGGAGGTCCCATaGTTTTGCTGGATGGCTAAT +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEMMEVP*FCWMAN
Trigger: ATTAGCCATCCAGCAAAAGCATGGGACCTCCATCAT...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCCAGCATCTTGTACCTTaGAGGATGCTCATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIQHLVP*RMLISF
Trigger: AAAACTGATGAGCATCCTGCAAGGTACAAGATGCTG...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCAGGGAGCAAAGAATTaGAATCGCCTCCTTAACGAA +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEQGAKN*NRLLNE
Trigger: TTCGTTAAGGAGGCGATTGCAATTCTTTGCTCCCTG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACAAATCCCACTTTACTTaGACTCCCTTAGATCCCACC +
Preference number: 4 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYKSHFT*TPLDPT
Trigger: GGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTT...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCTCAATAACAGCTGGTaGATAGCTCAGTCCAACCAT +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHELNNSW*IAQSNH
Trigger: ATGGTTGGACTGAGCTATCCACCAGCTGTTATTGAG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATCTCAATAACAGCTGGTaGATAGCTCAGTCCAACCAT +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNLNNSW*IAQSNH
Trigger: ATGGTTGGACTGAGCTATCCACCAGCTGTTATTGAG...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTGTGGAAATTGTTGGTaGTTCCGGTATGCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNCGNCW*FRYARS
Trigger: ACTACGAGCATACCGGAACCACCAACAATTTCCACA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGGAATGTGGAAATTGTTaGTGGTTCCGGTATGCTCGT +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEECGNC*WFRYAR
Trigger: ACGAGCATACCGGAACCACCAACAATTTCCACATTC...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGTCATGGACAATTGTTaGCCTTGGCTTCTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTVMDNC*PWLLLD
Trigger: GTCAAGGAGAAGCCAAGGCCAACAATTGTCCATGAC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACTACCAGTGGAAACAATaGGTTCCCACTCAACAGTAC +
Preference number: 4 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYYQWKQ*VPTQQY
Trigger: GTACTGTTGAGTGGGAACCCATTGTTTCCACTGGTA...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGCAAACCAATGCCCCATaGATTGAATGCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLQTNAP*IECSSQ
Trigger: CTGTGAGCTGCATTCAATCCATGGGGCATTGGTTTG...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGAGCTATTTGGTGACATaGGGACCCAAATTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLSYLVT*GPKFKG
Trigger: GCCCTTGAATTTGGGTCCCCATGTCACCAAATAGCT...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGACTCCTGTGGGGTGTGTaGGCATCTCAGGATCAGAAC +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRLLWGV*ASQDQN
Trigger: GTTCTGATCCTGAGATGCCCACACACCCCACAGGAG...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTTTCCAAACACTGTGGTaGGCCAGCACTGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALFQTLW*ASTASP
Trigger: AGGAGACGCAGTGCTGGCCCACCACAGTGTTTGGAA...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACCTTCCTCAGAATGGATaGCCATTCTTTTACCCTGTG +
Preference number: 4 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYLPQNG*PFFYPV
Trigger: CACAGGGTAAAAGAATGGCCATCCATTCTGAGGAAG...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CAA 72 bp CCTTCCTGTCTTGCTGATACAAAGGCCCACTATGAATaGCCATTTACCACAATGACTGTGATATTACATGGC +
Preference number: 4 (lower is better)
Translates to: PSCLADTKAHYE*PFTTMTVILHG
Trigger: GCCATGTAATATCACAGTCATTGTGGTAAATGGCAATTCATAGTGGGCCTTTGTATCAGCAAGACAGGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
3UTR CAA 72 bp ACTTTGCCATGGTTTGGTGCTGTACCAATCATATTATaGGTGGAGCAGAACTATGCAGTGATTCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: TLPWFGAVPIIL*VEQNYAVIPHA
Trigger: AGCATGAGGAATCACTGCATAGTTCTGCTCCACCAATAATATGATTGGTACAGCACCAAACCATGGCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATGAACCGGATCCATTTTaGAATATTGAAGCGACTGAT +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDEPDPF*NIEATD
Trigger: ATCAGTCGCTTCAATATTTCAAAATGGATCCGGTTC...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR TCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAGGCACAGCATCTGACTaGATGTCACTGAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEGTASD*MSLSSS
Trigger: GGATGAGCTCAGTGACATTCAGTCAGATGCTGTGCC...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATCAGTCCAACCATGTTTaGTGTCCGTCTATACATTCT +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNQSNHV*CPSIHS
Trigger: AGAATGTATAGACGGACATCAAACATGGTTGGACTG...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACGGATCAGACCGAGTCTaGATGTGGAAATTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNGSDRV*MWKLLV
Trigger: CACCAACAATTTCCACATTCAGACTCGGTCTGATCC...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGTTGATTTGTTGGAAGTaGCAAGACATATCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMLICWK*QDISVA
Trigger: GGCCACAGATATGTCTTGTCACTTCCAACAAATCAA...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTTGATTTGTTGGAAGTaGCAAGACATATCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNLICWK*QDISVA
Trigger: GGCCACAGATATGTCTTGTCACTTCCAACAAATCAA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGTTGATTTGTTGGAAGTaGCAAGACATATCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHELICWK*QDISVA
Trigger: GGCCACAGATATGTCTTGTCACTTCCAACAAATCAA...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATCAGTCTTCATTGCTTTaGTTTGTTGGAAGTGACAAG +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDQSSLL*FVGSDK
Trigger: CTTGTCACTTCCAACAAATCAAAGCAATGAAGACTG...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGAAACCTACTTGTGACTaGGCAACCATAGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMKPTCD*ATIVDF
Trigger: AAAGTCCACTATGGTTGCTCAGTCACAAGTAGGTTT...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGAATGAAACCTACTTGTaGCTGAGCAACCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHENETYL*LSNHSG
Trigger: TCCACTATGGTTGCTCAGTCACAAGTAGGTTTCATT...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTGGCATCTGACGAGCTaGTGCTATTCAAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNWHLTS*CYSNSN
Trigger: GTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCA...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGATAGACAGAATAGGATaGAGATCAGACTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEIDRIG*RSDWPE
Trigger: TTCAGGCCAGTCTGATCTTCATCCTATTCTGTCTAT...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGATAGACAGAATAGGATaGAGATCAGACTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMIDRIG*RSDWPE
Trigger: TTCAGGCCAGTCTGATCTTCATCCTATTCTGTCTAT...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGGAACTTGCTCAACTTaGATAACTGCAGTTTATTGG +
Preference number: 4 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIGTCST*ITAVYW
Trigger: CCAATAAACTGCAGTTATTCAAGTTGAGCAAGTTCC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCAGTGTGTAGCCAAATaGCTTTGTACAGCAAGCGCT +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNQCVAK*LCTASA
Trigger: AGCGCTTGCTGTACAAAGTCATTTGGCTACACACTG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGTATCCCAGCCTGCACTaGGTGAACGATGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVYPSLH*VNDALE
Trigger: TTCAAGAGCATCGTTCACGCAGTGCAGGCTGGGATA...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATATCAATGGCTTCTGGCTaGTGCAGAGCAGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLISMASG*CRAVFI
Trigger: AATGAAGACTGCTCTGCAGCAGCCAGAAGCCATTGA...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTGGATGGCTAATATCTaGTGTATGCAGCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNWMANI*CMQHKG
Trigger: TCCCTTATGCTGCATACAGCAGATATTAGCCATCCA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAGAGGTCCCATGCTTTTaGTGGATGGCTAATATCTGC +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIEVPCF*WMANIC
Trigger: GCAGATATTAGCCATCCAGCAAAAGCATGGGACCTC...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGGTTGTCACTTTTGTTTaGCCGTGTTCCATTGACTTG +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEVVTFV*PCSIDL
Trigger: CAAGTCAATGGAACACGGGCAAACAAAAGTGACAAC...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATGTTGTCACTTTTGTTTaGCCGTGTTCCATTGACTTG +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNVVTFV*PCSIDL
Trigger: CAAGTCAATGGAACACGGGCAAACAAAAGTGACAAC...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATTTGTACCTTGCAGGATaGTCATCAGTTTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDLYLAG*SSVFFE
Trigger: CTCAAAGAAAACTGATGAGCATCCTGCAAGGTACAA...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGGCCAAATGCATCTCTTaGAAACCTTCACATCCTTCA +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMAKCIS*KPSHPS
Trigger: TGAAGGATGTGAAGGTTTGCAAGAGATGCATTTGGC...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGATCAGGCCAGACAGATaGCTTGAAAGCCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQIRPDR*LESQVI
Trigger: AATGACCTGGCTTTCAAGGCATCTGTCTGGCCTGAT...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTGCCTCAATAACAGCTaGTGGATAGCTCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLCLNNS*WIAQSN
Trigger: GTTGGACTGAGCTATCCACCAGCTGTTATTGAGGCA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACATGTGGAAATTGTTGGTaGTTCCGGTATGCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTCGNCW*FRYARS
Trigger: ACTACGAGCATACCGGAACCACCAACAATTTCCACA...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCTTTTGGCTTTTCAATaGCTTCTGGCTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNLLAFQ*LLAAAE
Trigger: CTCTGCAGCAGCCAGAAGCCATTGAAAAGCCAAAAG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGTCCCATGCTTTTGCTaGATGGCTAATATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTVPCFC*MANICC
Trigger: ACAGCAGATATTAGCCATCCAGCAAAAGCATGGGAC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGGTCCCATGCTTTTGCTaGATGGCTAATATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLVPCFC*MANICC
Trigger: ACAGCAGATATTAGCCATCCAGCAAAAGCATGGGAC...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACATGACTTCTCGGCTTTaGAGTTTTTCCCACGAGGGT +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNMTSRL*SFSHEG
Trigger: ACCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCAT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATAATTTTACACCCTCTTaGCCTAGGACCACAAAATCA +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDNFTPS*PRTTKS
Trigger: TGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATT...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGTTTGTAGGGCTGTCCTaGAGAGTTCATCCTGATTAT +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMFVGLS*RVHPDY
Trigger: ATAATCAGGATGAACTCTCCAGGACAGCCCTACAAA...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTGTTCCCCAGGAACATaGCTTCCAACATCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLCSPGT*LPTSRS
Trigger: GCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACTTGGTCTTCAACTTTTaGATTACCGTCTCACATCCC +
Preference number: 4 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYLVFNF*ITVSHP
Trigger: GGGATGTGAGACGGTAATCCAAAAGTTGAAGACCAA...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAAGAAGGCACAGCATCTaGCTGAATGTCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNERRHSI*LNVTEL
Trigger: GAGCTCAGTGACATTCAGTCAGATGCTGTGCCTTCT...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGGGATCAGACCGAGTCTaGATGTGGAAATTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELGSDRV*MWKLLV
Trigger: CACCAACAATTTCCACATTCAGACTCGGTCTGATCC...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAGCTGCACTTAAATGGTaGTTCTCCAGTACAGATCTG +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLAALKW*FSSTDL
Trigger: CAGATCTGTACTGGAGAATCACCATTTAAGTGCAGC...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATCCTCCAGTCATCCTTTaGGAGGTTAATCAAAATATT +
Preference number: 4 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDPPVIL*EVNQNI
Trigger: AATATTTTGATTAACCTCTCAAAGGATGACTGGAGG...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCAGTCTTCATTGCTTTaGTTTGTTGGAAGTGACAAG +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEQSSLL*FVGSDK
Trigger: CTTGTCACTTCCAACAAATCAAAGCAATGAAGACTG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAAACCTACTTGTGACTaGGCAACCATAGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTKPTCD*ATIVDF
Trigger: AAAGTCCACTATGGTTGCTCAGTCACAAGTAGGTTT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACCTGTCCCACCAGTTTaGGAGGTTTCATCGATTAAT +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLPVPPV*EVSSIN
Trigger: ATTAATCGATGAAACCTCTCAAACTGGTGGGACAGG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCCCTGTCCCACCAGTTTaGGAGGTTTCATCGATTAAT +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLPVPPV*EVSSIN
Trigger: ATTAATCGATGAAACCTCTCAAACTGGTGGGACAGG...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCCTGTCCCACCAGTTTaGGAGGTTTCATCGATTAAT +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNPVPPV*EVSSIN
Trigger: ATTAATCGATGAAACCTCTCAAACTGGTGGGACAGG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGTGGCATCTGACGAGCTaGTGCTATTCAAACTCGAAC +
Preference number: 4 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVWHLTS*CYSNSN
Trigger: GTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCA...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGCGTGTTCCATTGACTTaGTTCTTAGTTTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLRVPLT*FLVSPD
Trigger: GTCTGGAGAAACTAAGAATCAAGTCAATGGAACACG...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGATAGGAATTACCTGTTaGGTTAACCTAATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEIGITC*VNLIQV
Trigger: CACCTGGATTAGGTTAACTCAACAGGTAATTCCTAT...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGGTGAGGTCATTGTTATaGACACAGGGAGCACAACAG +
Preference number: 4 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVVRSLL*TQGAQQ
Trigger: CTGTTGTGCTCCCTGTGTTCATAACAATGACCTCAC...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGAGCAGAACTATGCAGTaGTTCCTCATGCTGCACATA +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQSRTMQ*FLMLHI
Trigger: TATGTGCAGCATGAGGAATCACTGCATAGTTCTGCT...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCCTGGGAACATGTTCATaGTCAGATAAACTGTCTAAT +
Preference number: 4 (lower is better)
Translates to: RDWNHHLCGDECQHGCIILGTCS*SDKLSN
Trigger: ATTAGACAGTTTATCTGATCATGAACATGTTCCCAG...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTATCCCCAGCGACCTTTaGCACCCAAAACTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALIPSDL*HPKLSH
Trigger: ATGGGAAAGTTTTGGGTGTCAAAGGTCGCTGGGGAT...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGGGGAAAATTATACATTaGAGGACTGTCAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLGKIIH*RTVRLI
Trigger: GATGAGCCTGACAGTCCTTCAATGTATAATTTTCCC...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATATCGATCTGTTCCGGTTaGAGGTATTTCAGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLISICSG*RYFREL
Trigger: CAACTCTCTGAAATACCTGCAACCGGAACAGATCGA...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGGAAAATAAATTTCAGTaGATGATCCCCACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLENKFQ*MIPTGL
Trigger: GAGGCCAGTGGGGATCATGCACTGAAATTTATTTTC...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACAAGGATTTTTGTGCTTaGTGTATCCCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNKDFCA*CIPLPG
Trigger: CCCTGGAAGTGGGATACAGCAAGCACAAAAATCCTT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATCAGAGCAGTCTTCATTaGTTTGATTTGTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNQSSLH*FDLLEV
Trigger: CACTTCCAACAAATCAAAGCAATGAAGACTGCTCTG...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGACTCTCCCGATTGATGTaGACCACTTCCGTCCAAGTA +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRLSRLM*TTSVQV
Trigger: TACTTGGACGGAAGTGGTGCACATCAATCGGGAGAG...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTGCATAGGAGCTAGATaGGTAAGCAGGGCGTTTAAA +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLCIGAR*VSRAFK
Trigger: TTTAAACGCCCTGCTTACGCATCTAGCTCCTATGCA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTTGTACCTTGCAGGATaGTCATCAGTTTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNLYLAG*SSVFFE
Trigger: CTCAAAGAAAACTGATGAGCATCCTGCAAGGTACAA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACACAGCATCTTGTACCTTaGAGGATGCTCATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTQHLVP*RMLISF
Trigger: AAAACTGATGAGCATCCTGCAAGGTACAAGATGCTG...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACAGGGAGCAAAGAATTaGAATCGCCTCCTTAACGAA +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLQGAKN*NRLLNE
Trigger: TTCGTTAAGGAGGCGATTGCAATTCTTTGCTCCCTG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGGAGTCTCTTGTCTGCTaGCATAAACTATTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQESLVC*HKLLGL
Trigger: GAGCCCTAATAGTTTATGGCAGCAGACAAGAGACTC...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTGGTGGAGCAGAACTATaGAGTGATTCCTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALGGAEL*SDSSCC
Trigger: GCAGCATGAGGAATCACTGCATAGTTCTGCTCCACC...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACTCAATAACAGCTGGTaGATAGCTCAGTCCAACCAT +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLLNNSW*IAQSNH
Trigger: ATGGTTGGACTGAGCTATCCACCAGCTGTTATTGAG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAGAATGTGGAAATTGTTaGTGGTTCCGGTATGCTCGT +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLECGNC*WFRYAR
Trigger: ACGAGCATACCGGAACCACCAACAATTTCCACATTC...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACACATGCTTTTGCTGGATaGCTAATATCTGCTGTATGC +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTHAFAG*LISAVC
Trigger: GCATACAGCAGATATTAGCCATCCAGCAAAAGCATG...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCGTATCAGATCCACAATaGGATCCTGTCAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: RDWNHHLCGDECQHGCIIVSDPQ*DPVKCF
Trigger: AAAACATTTGACAGGATCCCATTGTGGATCTGATAC...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGTCATTGGTTGAGGTTTaGGTTTTGGTTCTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQSLVEV*VLVLLA
Trigger: GGCAAGCAGAACCAAAACCCAAACCTCAACCAATGA...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCCAGTCCAACCATGTTTaGTGTCCGTCTATACATTCT +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLQSNHV*CPSIHS
Trigger: AGAATGTATAGACGGACATCAAACATGGTTGGACTG...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAGTCATGGATGGCAGCTaGGAAGATTATAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLVMDGS*EDYSKD
Trigger: ATCTTTGCTATAATCTTCTCAGCTGCCATCCATGAC...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGCCTCCAGTCATCCTTTaGGAGGTTAATCAAAATATT +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEPPVIL*EVNQNI
Trigger: AATATTTTGATTAACCTCTCAAAGGATGACTGGAGG...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGTTGATTTGTTGGAAGTaGCAAGACATATCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQLICWK*QDISVA
Trigger: GGCCACAGATATGTCTTGTCACTTCCAACAAATCAA...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAATGAAACCTACTTGTaGCTGAGCAACCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLNETYL*LSNHSG
Trigger: TCCACTATGGTTGCTCAGTCACAAGTAGGTTTCATT...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACGTGTTCCATTGACTTaGTTCTTAGTTTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLRVPLT*FLVSPD
Trigger: GTCTGGAGAAACTAAGAATCAAGTCAATGGAACACG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCCGTGTTCCATTGACTTaGTTCTTAGTTTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLRVPLT*FLVSPD
Trigger: GTCTGGAGAAACTAAGAATCAAGTCAATGGAACACG...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACATTTCCGATGTTAGAGTaGTCCTTCTTGTCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTFPMLE*SFLSVL
Trigger: TAAGACAGACAAGAAGGATCACTCTAACATCGGAAA...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTTCCACCAACAACTGTaGGAACAATCAGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLFHQQL*EQSGSQ
Trigger: TTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAATAGGAATTACCTGTTaGGTTAACCTAATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTIGITC*VNLIQV
Trigger: CACCTGGATTAGGTTAACTCAACAGGTAATTCCTAT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGTATAGAGCTATTTGGTaGCATGGGGACCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQYRAIW*HGDPNS
Trigger: TGAATTTGGGTCCCCATGTCACCAAATAGCTCTATA...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTCCCTGCACCATAAACTaGCTGAGAAATGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALPCTIN*LRNDPA
Trigger: TGCAGGATCATTTCTCAGTCAGTTTATGGTGCAGGG...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACCTTGCTTTGGGTAATTaGTTTCCCATAAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYLALGN*FPIKIS
Trigger: GGAAATCTTTATGGGAAATCAATTACCCAAAGCAAG...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAAAGAGAAAAACCCTGTaGGAGCAAAAACTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIKRKTL*EQKLCC
Trigger: ACAGCACAGTTTTTGCTCTCACAGGGTTTTTCTCTT...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAAAGTCACCATTCTGTTaGTGTTCTCCTGATGACTTC +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLKSPFC*CSPDDF
Trigger: GAAGTCATCAGGAGAACAGCAACAGAATGGTGACTT...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGGAGAACGCTGTTTTGTaGCATCTGTTTTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: WIPPTTVRTIRISRALDMENAVL*HLFSLN
Trigger: ATTCAAAGAAAACAGATGGCACAAAACAGCGTTCTC...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCCAGCATCTTGTACCTTaGAGGATGCTCATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLQHLVP*RMLISF
Trigger: AAAACTGATGAGCATCCTGCAAGGTACAAGATGCTG...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATGAAAATGAAGCCAAATaGATCTCTTGCAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNENEAK*ISCKPS
Trigger: TGAAGGTTTGCAAGAGATGCATTTGGCTTCATTTTC...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGGAAAATGAAGCCAAATaGATCTCTTGCAAACCTTCA +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEENEAK*ISCKPS
Trigger: TGAAGGTTTGCAAGAGATGCATTTGGCTTCATTTTC...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGTTTAGATATGTAGCGTaGTGTGAAGAGGATCTGAAA +
Preference number: 4 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEFRYVA*CEEDLK
Trigger: TTTCAGATCCTCTTCACAGCACGCTACATATCTAAA...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAGTCTCCAGCTTCATTTaGAACTATGGTGAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLVSSFI*NYGEAV
Trigger: TACAGCTTCACCATAGTTGCAAATGAAGCTGGAGAC...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR GCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTAGGTGTGTAAGCCCTTaGTCTGTGTGTGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALRCVSP*SVCVNQ
Trigger: CTGGTTTACACACACAGAGCAAGGGCTTACACACCT...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCAAAGACCGTAATCTCTaGGACGTTTTCTTATATTTC +
Preference number: 4 (lower is better)
Translates to: RDWNHHLCGDECQHGCIIKDRNL*DVFLYF
Trigger: GAAATATAAGAAAACGTCCCAGAGATTACGGTCTTT...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGACTTTTGGCTTTTCAATaGCTTCTGGCTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRLLAFQ*LLAAAE
Trigger: CTCTGCAGCAGCCAGAAGCCATTGAAAAGCCAAAAG...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGCATGCTTTTGCTGGATaGCTAATATCTGCTGTATGC +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQHAFAG*LISAVC
Trigger: GCATACAGCAGATATTAGCCATCCAGCAAAAGCATG...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCATGCTTTTGCTGGATaGCTAATATCTGCTGTATGC +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNHAFAG*LISAVC
Trigger: GCATACAGCAGATATTAGCCATCCAGCAAAAGCATG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCCATGCTTTTGCTGGATaGCTAATATCTGCTGTATGC +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLHAFAG*LISAVC
Trigger: GCATACAGCAGATATTAGCCATCCAGCAAAAGCATG...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGAATGACTTCTCGGCTTTaGAGTTTTTCCCACGAGGGT +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRMTSRL*SFSHEG
Trigger: ACCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCAT...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGCACCTTCTCCAGATATaGGTCTTTGTGGAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELHLLQI*VFVEEG
Trigger: TCCTTCTTCCACAAAGACCCATATCTGGAGAAGGTG...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGTATCAATGCTACCAGTaGAAACAATGGGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQYQCYQ*KQWVPT
Trigger: AGTGGGAACCCATTGTTTCCACTGGTAGCATTGATA...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTATCCCACCTGTAATTTaGTCTCAAGGGGGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALIPPVI*SQGGCN
Trigger: ATTGCAGCCCCCTTGAGACCAAATTACAGGTGGGAT...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATACATCTAACTTTGCCATaGTTTGGTGCTGTACCAATC +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIHLTLP*FGAVPI
Trigger: GATTGGTACAGCACCAAACCATGGCAAAGTTAGATG...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGGCAGAATGGGTTACCTaGACAGAAGCAAAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELAEWVT*TEAKEG
Trigger: TCCTTCTTTTGCTTCTGTCCAGGTAACCCATTCTGC...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAGAACCGGATCCATTTTaGAATATTGAAGCGACTGAT +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIEPDPF*NIEATD
Trigger: ATCAGTCGCTTCAATATTTCAAAATGGATCCGGTTC...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCTCTCTCTAATTGTTTaGCCAAAGACCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNLSLIV*PKTVIS
Trigger: AGAGATTACGGTCTTTGGTCAAACAATTAGAGAGAG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTGCTGCACTTAAATGGTaGTTCTCCAGTACAGATCTG +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALAALKW*FSSTDL
Trigger: CAGATCTGTACTGGAGAATCACCATTTAAGTGCAGC...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAACCTGTCCCACCAGTTTaGGAGGTTTCATCGATTAAT +
Preference number: 4 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEPVPPV*EVSSIN
Trigger: ATTAATCGATGAAACCTCTCAAACTGGTGGGACAGG...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTTCCGATGTTAGAGTaGTCCTTCTTGTCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNFPMLE*SFLSVL
Trigger: TAAGACAGACAAGAAGGATCACTCTAACATCGGAAA...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAGGAACTTGCTCAACTTaGATAACTGCAGTTTATTGG +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLGTCST*ITAVYW
Trigger: CCAATAAACTGCAGTTATTCAAGTTGAGCAAGTTCC...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAAGTACAGTCACCAGCTaGACATTCAGGTTTATACTA +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLISTVTS*TFRFIL
Trigger: TAGTATAAACCTGAATGTTCAGCTGGTGACTGTACT...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAGCCCCTGAAGTCATTTaGATTTCTGGCCACATTATG +
Preference number: 4 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEAPEVI*ISGHIM
Trigger: CATAATGTGGCCAGAAATTCAAATGACTTCAGGGGC...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGTTGTACGTGCTAAAATaGTACTGCAAGCAGAATGGG +
Preference number: 4 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVLYVLK*YCKQNG
Trigger: CCCATTCTGCTTGCAGTATCATTTTAGCACGTACAA...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCAGAGCAGTCTTCATTaGTTTGATTTGTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNQSSLH*FDLLEV
Trigger: CACTTCCAACAAATCAAAGCAATGAAGACTGCTCTG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAATCTTTTTCTCAGCTTTaGCAGATGCGCCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNESFSQL*QMRLLQ
Trigger: CTGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGA...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGGTTGTCACTTTTGTTTaGCCGTGTTCCATTGACTTG +
Preference number: 4 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVVVTFV*PCSIDL
Trigger: CAAGTCAATGGAACACGGGCAAACAAAAGTGACAAC...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGTACCTTGCAGGATaGTCATCAGTTTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNLYLAG*SSVFFE
Trigger: CTCAAAGAAAACTGATGAGCATCCTGCAAGGTACAA...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAAATGAGTCTCTTGTCTaGTGCCATAAACTATTAGGG +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLINESLV*CHKLLG
Trigger: CCCTAATAGTTTATGGCAGCAGACAAGAGACTCATT...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACCATAGAGAATCTATTTaGTGTAGGAGAGTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYHRESI*CRRVCL
Trigger: TAAACAGACTCTCCTACAGCAAATAGATTCTCTATG...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGTTTGGGTTTTGGTTCTaGTTGCCTCTCTCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELFGFWF*LPLSFE
Trigger: CTCAAAAGAGAGAGGCAAGCAGAACCAAAACCCAAA...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACAACCTGCATTTTATCTaGCAGAAGTGTATTTCACAT +
Preference number: 4 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYNLHFI*QKCISH
Trigger: ATGTGAAATACACTTCTGGCAGATAAAATGCAGGTT...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGACTCAATAACAGCTGGTaGATAGCTCAGTCCAACCAT +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRLNNSW*IAQSNH
Trigger: ATGGTTGGACTGAGCTATCCACCAGCTGTTATTGAG...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAATTATACAGAATAGCTaGATCAGACCGAGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTIIQNS*IRPSLN
Trigger: ATTCAGACTCGGTCTGATCCAGCTATTCTGTATAAT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGGACAAGACATATCTGTaGCCATCACCATTTCAATTA +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLDKTYL*PSPFQL
Trigger: TAATTGAAATGGTGATGGCCACAGATATGTCTTGTC...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAAATTTTACACCCTCTTaGCCTAGGACCACAAAATCA +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLNFTPS*PRTTKS
Trigger: TGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATT...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAAATGATGCAAGACACTaGCAGCCTCTTTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLINDARH*QPLLLS
Trigger: AGACAATAAAAGAGGCTGCCAGTGTCTTGCATCATT...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGAACTTTGCCATGGTTTaGTGCTGTACCAATCATATT +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLNFAMV*CCTNHI
Trigger: AATATGATTGGTACAGCACCAAACCATGGCAAAGTT...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTCAGTCCAACCATGTTTaGTGTCCGTCTATACATTCT +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALQSNHV*CPSIHS
Trigger: AGAATGTATAGACGGACATCAAACATGGTTGGACTG...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTGTCATGGATGGCAGCTaGGAAGATTATAGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALVMDGS*EDYSKD
Trigger: ATCTTTGCTATAATCTTCTCAGCTGCCATCCATGAC...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACCTCCAGTCATCCTTTaGGAGGTTAATCAAAATATT +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLPPVIL*EVNQNI
Trigger: AATATTTTGATTAACCTCTCAAAGGATGACTGGAGG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR TCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGAAAACCTACTTGTGACTaGGCAACCATAGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRKPTCD*ATIVDF
Trigger: AAAGTCCACTATGGTTGCTCAGTCACAAGTAGGTTT...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTTCTCACAAATCCAGCTaGACAGCAGCAACATCTAAA +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALSHKSS*TAATSK
Trigger: TTTAGATGTTGCTGCTGTTCAGCTGGATTTGTGAGA...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGCTTGCCTCTCTCTTTTaGGTCTTGCTAAATGTTCTT +
Preference number: 4 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVLASLF*VLLNVL
Trigger: AAGAACATTTAGCAAGACTCAAAAGAGAGAGGCAAG...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGCAGAGCAGTCTTCATTaGTTTGATTTGTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELQSSLH*FDLLEV
Trigger: CACTTCCAACAAATCAAAGCAATGAAGACTGCTCTG...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGCTAATATCTGCTGTATaGAGCATAAGGGATAAGGCT +
Preference number: 4 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELLISAV*SIRDKA
Trigger: AGCCTTATCCCTTATGCTGCATACAGCAGATATTAG...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTAAGTCACCATTCTGTTaGTGTTCTCCTGATGACTTC +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALKSPFC*CSPDDF
Trigger: GAAGTCATCAGGAGAACAGCAACAGAATGGTGACTT...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCGAGAACGCTGTTTTGTaGCATCTGTTTTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLENAVL*HLFSLN
Trigger: ATTCAAAGAAAACAGATGGCACAAAACAGCGTTCTC...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAGAGAACGCTGTTTTGTaGCATCTGTTTTCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLENAVL*HLFSLN
Trigger: ATTCAAAGAAAACAGATGGCACAAAACAGCGTTCTC...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTATTTAGATATGTAGCGTaGTGTGAAGAGGATCTGAAA +
Preference number: 4 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLFRYVA*CEEDLK
Trigger: TTTCAGATCCTCTTCACAGCACGCTACATATCTAAA...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR GCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATCAGCATATTCATGTaGTTCACTCTTGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEISIFM*FTLGKD
Trigger: GTCCTTCCCAAGAGTGAAGCACATGAATATGCTGAT...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTTCTAAGAACATAGCTTaGAAACCAATGCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALSKNIA*KPMPHG
Trigger: TCCATGGGGCATTGGTTTGCAAGCTATGTTCTTAGA...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAATTATACAGAATAGCTaGATCAGACCGAGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIIIQNS*IRPSLN
Trigger: ATTCAGACTCGGTCTGATCCAGCTATTCTGTATAAT...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCGACAAGACATATCTGTaGCCATCACCATTTCAATTA +
Preference number: 4 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLDKTYL*PSPFQL
Trigger: TAATTGAAATGGTGATGGCCACAGATATGTCTTGTC...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CCA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGACGTTTTATATAGATTaGTGTCATCTTCCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLTFYID*CHLPFW
Trigger: CCAAAAGGGAAGATGACACCAATCTATATAAAACGT...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGTATTCAGCTAGTCATTaGTTGAGGTTTGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELYSASH*LRFGFW
Trigger: CCAAAACCCAAACCTCAACCAATGACTAGCTGAATA...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGGGAGATATGATGCTATaGCATTTGGATAACATTGGT +
Preference number: 4 (lower is better)
Translates to: IWITLVKQHLREQNTLPQGDMML*HLDNIG
Trigger: ACCAATGTTATCCAAATGCCATAGCATCATATCTCC...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGACAGTCTTCATTGCTTTaGTTTGTTGGAAGTGACAAG +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRQSSLL*FVGSDK
Trigger: CTTGTCACTTCCAACAAATCAAAGCAATGAAGACTG...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTTTTCCGATGTTAGAGTaGTCCTTCTTGTCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALFPMLE*SFLSVL
Trigger: TAAGACAGACAAGAAGGATCACTCTAACATCGGAAA...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAAATAAGCTATTTGTGTaGGTAGGGTATGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNENKLFV*VGYACI
Trigger: TATGCAGGCATACCCTACTCACACAAATAGCTTATT...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTCTAAAGCTGAGGAGATaGGTTGAGTTTTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALLKLRR*VEFSIH
Trigger: ATGAATGGAAAACTCAACTCATCTCCTCAGCTTTAG...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTTGGAATCATCATCTTTaGGGTGATGAATGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALWNHHL*GDECQH
Trigger: ATGCTGACATTCATCACCGCAAAGATGATGATTCCA...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGATCAGCATGCTGTTGTaGATTCGATACTACAAAGTT +
Preference number: 4 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVISMLL*IRYYKV
Trigger: AACTTTGTAGTATCGAATGCACAACAGCATGCTGAT...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR GCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTACATACAAGTACTTATaGATTACTAGATGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALTYKYL*ITRCWG
Trigger: CCCCCAGCATCTAGTAATGCATAAGTACTTGTATGT...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACAAAGACCGTAATCTCTaGGACGTTTTCTTATATTTC +
Preference number: 4 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNKDRNL*DVFLYF
Trigger: GAAATATAAGAAAACGTCCCAGAGATTACGGTCTTT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR CCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTAGTAAAATCTGGCCTTaGCAGGTAATATGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALSKIWP*QVICLL
Trigger: CAAGAGACATATTACCTGCCAAGGCCAGATTTTACT...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGACCTCCAGTCATCCTTTaGGAGGTTAATCAAAATATT +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRPPVIL*EVNQNI
Trigger: AATATTTTGATTAACCTCTCAAAGGATGACTGGAGG...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAACCCTTAGCACTTTACTaGATAAAAAGAAGAGTGATG +
Preference number: 4 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEPLALY*IKRRVM
Trigger: CATCACTCTTCTTTTTATTCAGTAAAGTGCTAAGGG...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR TCA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAACTTAAATTCTACAAATaGATGAACACGTGCACTAGG +
Preference number: 4 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNELKFYK*MNTCTR
Trigger: CCTAGTGCACGTGTTCATTCATTTGTAGAATTTAAG...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGATACCAATCATATTATTaGTGGAGCAGAACTATGCAG +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRYQSYY*WSRTMQ
Trigger: CTGCATAGTTCTGCTCCACCAATAATATGATTGGTA...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGACCCATACGAATTGCATaGAACAAGGTGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRPIRIA*NKVLLF
Trigger: AAATAAAAGCACCTTGTTCCATGCAATTCGTATGGG...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CCA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTTCTAGAATCAGTTATTaGACAATACCTATGGCTGTA +
Preference number: 4 (lower is better)
Translates to: KMQRIICHISLILIPLALSRISY*TIPMAV
Trigger: TACAGCCATAGGTATTGTCCAATAACTGATTCTAGA...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS GCA 90 bp CGCCCGAGCGCGTGGACGGGGCTGACCGGTGGGCGCGGAGATCCCTaGCTGGCCACGCTACTCTCTGTCAGCCGCGGATCCCGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: RPSAWTGLTGGRGDP*LATLLSVSRGSRAP
Trigger: TGGCGCGCGGGATCCGCGGCTGACAGAGAGTAGCGTGGCCAGGCAGGGATCTCCGCGCCCACCGGTCAGCCCCGTCCACGCGCTCGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS GCA 90 bp GGAGCAGCCGGTGGCGCCTCAGGCTGCGGTGGCAACGAGCCCGACTaGACTACGGCTTTGCGGGACCGCGCCAGCGCGGAGGAGACCGAG +
Preference number: 5 (lower is better)
Translates to: GAAGGASGCGGNEPD*TTALRDRASAEETE
Trigger: CTCGGTCTCCTCCGCGCTGGCGCGGTCCCGCAAAGCCGTAGTGCAGTCGGGCTCGTTGCCACCGCAGCCTGAGGCGCCACCGGCTGCTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS CCA 90 bp ACCCCCGCAGGGCAGCCGCGGCCACCACCGACCTGCGGAGCTGCGTaGGCTTCCGGAACCCTCACCTCAACAAGAGCTCGGCTCCGCGCG +
Preference number: 5 (lower is better)
Translates to: TPAGQPRPPPTCGAA*ASGTLTSTRARLRA
Trigger: CGCGCGGAGCCGAGCTCTTGTTGAGGTGAGGGTTCCGGAAGCCCACGCAGCTCCGCAGGTCGGTGGTGGCCGCGGCTGCCCTGCGGGGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000495221.1
CDS CCA 90 bp AGGAAGGGAGGACGCGCGCCCGAGCGCGTGGACGGGGCTGACCGGTaGGCGCGGAGATCCCTGCCTGGCCACGCTACTCTCTGTCAGCCG +
Preference number: 5 (lower is better)
Translates to: RKGGRAPERVDGADR*ARRSLPGHATLCQP
Trigger: CGGCTGACAGAGAGTAGCGTGGCCAGGCAGGGATCTCCGCGCCCACCGGTCAGCCCCGTCCACGCGCTCGGGCGCGCGTCCTCCCTTCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS TCA 90 bp GAGTGTCAGGAAGGGAGGACGCGCGCCCGAGCGCGTGGACGGGGCTaGCCGGTGGGCGCGGAGATCCCTGCCTGGCCACGCTACTCTCTG +
Preference number: 5 (lower is better)
Translates to: ECQEGRTRARARGRG*PVGAEIPAWPRYSL
Trigger: CAGAGAGTAGCGTGGCCAGGCAGGGATCTCCGCGCCCACCGGTCAGCCCCGTCCACGCGCTCGGGCGCGCGTCCTCCCTTCCTGACACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS GCA 90 bp ACTCACCCCCGCAGGGCAGCCGCGGCCACCACCGACCTGCGGAGCTaGGTGGGCTTCCGGAACCCTCACCTCAACAAGAGCTCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: THPRRAAAATTDLRS*VGFRNPHLNKSSAP
Trigger: CGGAGCCGAGCTCTTGTTGAGGTGAGGGTTCCGGAAGCCCACGCAGCTCCGCAGGTCGGTGGTGGCCGCGGCTGCCCTGCGGGGGTGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000495221.1
CDS GCA 90 bp GATAGTTTGGGCTGTCCCCTCCCCGTCTCCTCGCCCAGCTCGCGATaGCCAGCCAGGCGCGGCGCGCGTTTGCCCGGCACTTTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: DSLGCPLPVSSPSSR*PARRGARLPGTFSA
Trigger: CGCCGAGAAAGTGCCGGGCAAACGCGCGCCGCGCCTGGCTGGGCATCGCGAGCTGGGCGAGGAGACGGGGAGGGGACAGCCCAAACTATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396182.6
ENST00000396189.2
CDS CCA 90 bp GTCTCCGACAGCAACGGGAGCAGCCGGTGGCGCCTCAGGCTGCGGTaGCAACGAGCCCGACTGCACTACGGCTTTGCGGGACCGCGCCAG +
Preference number: 5 (lower is better)
Translates to: VSDSNGSSRWRLRLR*QRARLHYGFAGPRQ
Trigger: CTGGCGCGGTCCCGCAAAGCCGTAGTGCAGTCGGGCTCGTTGCCACCGCAGCCTGAGGCGCCACCGGCTGCTCCCGTTGCTGTCGGAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS GCA 90 bp CGCGGCGCGCGTTTGCCCGGCACTTTCTCGGCGCGCTCCCCCTTCTaGGCCCCCAGACTCCGACTTAGAGCGGACTCCGATCGCGGCAAA +
Preference number: 5 (lower is better)
Translates to: RGARLPGTFSARSPF*APRLRLRADSDRGK
Trigger: TTTGCCGCGATCGGAGTCCGCTCTAAGTCGGAGTCTGGGGGCGCAGAAGGGGGAGCGCGCCGAGAAAGTGCCGGGCAAACGCGCGCCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396182.6
ENST00000396189.2
ENST00000495221.1
CDS TCA 90 bp GGCCGCGCCGCGCTGTCACTCTCAGCCCCGCCGCGCGCTGGCAGCTaGGCGCCTGGAGACAACAGCGGGGACCCAATGTCAACAGCTAAA +
Preference number: 5 (lower is better)
Translates to: GRAALSLSAPPRAGS*APGDNSGDPMSTAK
Trigger: TTTAGCTGTTGACATTGGGTCCCCGCTGTTGTCTCCAGGCGCTCAGCTGCCAGCGCGCGGCGGGGCTGAGAGTGACAGCGCGGCGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS GCA 90 bp TCCGACTTAGAGCGGACTCCGATCGCGGCAAACCATGGCCCCAGGTaGGCTCCGGAGGCAGCTGCGGGAACCAGCCATGGTCCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SDLERTPIAANHGPR*APEAAAGTSHGPGL
Trigger: GAGCCCGGGACCATGGCTGGTTCCCGCAGCTGCCTCCGGAGCGCACCTGGGGCCATGGTTTGCCGCGATCGGAGTCCGCTCTAAGTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396189.2
CDS GCA 90 bp TCCGACTTAGAGCGGACTCCGATCGCGGCAAACCATGGCCCCAGGTaGGCTCCGGAGGCAGCTGCGGGAACCAGCCATGGTCCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: SDLERTPIAANHGPR*APEAAAGTSHGPGQ
Trigger: CTGCCCGGGACCATGGCTGGTTCCCGCAGCTGCCTCCGGAGCGCACCTGGGGCCATGGTTTGCCGCGATCGGAGTCCGCTCTAAGTCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495221.1
CDS GCA 90 bp AATGGGTCTCCGACAGCAACGGGAGCAGCCGGTGGCGCCTCAGGCTaGGGTGGCAACGAGCCCGACTGCACTACGGCTTTGCGGGACCGC +
Preference number: 5 (lower is better)
Translates to: NGSPTATGAAGGASG*GGNEPDCTTALRDR
Trigger: GCGGTCCCGCAAAGCCGTAGTGCAGTCGGGCTCGTTGCCACCGCAGCCTGAGGCGCCACCGGCTGCTCCCGTTGCTGTCGGAGACCCATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS GCA 90 bp CCTCGCCAACTTCGGCAGCTCTTCTCGATGTCTCGCCGCGGGCTGTaGCTCACAGGCTACGGGAGGGGAGAGTGTCTCCCCACGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PRQLRQLFSMSRRGL*LTGYGRGECLPTPG
Trigger: CCCCGGCGTGGGGAGACACTCTCCCCTCCCGTAGCCTGTGAGGCACAGCCCGCGGCGAGACATCGAGAAGAGCTGCCGAAGTTGGCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS CCA 90 bp GCCCCCAGACTCCGACTTAGAGCGGACTCCGATCGCGGCAAACCATaGCCCCAGGTGCGCTCCGGAGGCAGCTGCGGGAACCAGCCATGG +
Preference number: 5 (lower is better)
Translates to: APRLRLRADSDRGKP*PQVRSGGSCGNQPW
Trigger: CCATGGCTGGTTCCCGCAGCTGCCTCCGGAGCGCACCTGGGGCCATGGTTTGCCGCGATCGGAGTCCGCTCTAAGTCGGAGTCTGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396182.6
ENST00000396189.2
ENST00000495221.1
CDS GCA 90 bp TCCGACTTAGAGCGGACTCCGATCGCGGCAAACCATGGCCCCAGGTaGGCTCCGGAGGCAGCTGCGGGAACCAGCCATGGTCCCGGGCTA +
Preference number: 5 (lower is better)
Translates to: SDLERTPIAANHGPR*APEAAAGTSHGPGL
Trigger: TAGCCCGGGACCATGGCTGGTTCCCGCAGCTGCCTCCGGAGCGCACCTGGGGCCATGGTTTGCCGCGATCGGAGTCCGCTCTAAGTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396182.6
CDS CCA 90 bp TTTAGGGAGCGCGAATGGGTCTCCGACAGCAACGGGAGCAGCCGGTaGCGCCTCAGGCTGCGGTGGCAACGAGCCCGACTGCACTACGGC +
Preference number: 5 (lower is better)
Translates to: FREREWVSDSNGSSR*RLRLRWQRARLHYG
Trigger: GCCGTAGTGCAGTCGGGCTCGTTGCCACCGCAGCCTGAGGCGCCACCGGCTGCTCCCGTTGCTGTCGGAGACCCATTCGCGCTCCCTAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS GCA 90 bp GGCTGGGACATACTCGCCTCACGCTTCAGCACCGGGGACAGCTCCTaGCTCGCCAACTTCGGCAGCTCTTCTCGATGTCTCGCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: GWDILASRFSTGDSS*LANFGSSSRCLAAG
Trigger: GCCCGCGGCGAGACATCGAGAAGAGCTGCCGAAGTTGGCGAGGCAGGAGCTGTCCCCGGTGCTGAAGCGTGAGGCGAGTATGTCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS GCA 90 bp GGTGGTGAAGGTCCAAGAAGTCTGCCAGCTTCCCTCCGGCTGGTCTaGTCTCCTCCAGCTAGTGGCAGGGCAGCAAGACAGTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GGEGPRSLPASLRLV*SPPASGRAARQCRP
Trigger: AGGCCTGCACTGTCTTGCTGCCCTGCCACTAGCTGGAGGAGAGCAGACCAGCCGGAGGGAAGCTGGCAGACTTCTTGGACCTTCACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464881.1
CDS TCA 90 bp TGGTCCCGGGCAGCAGCTCTGCTGACAAGCGAGAAAACTGACAAGTaGGAAAAGTCGTCTGTCAGCGCCCGGGCTGGTGTCTGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: WSRAAALLTSEKTDK*EKSSVSARAGVWAV
Trigger: GACAGCCCAGACACCAGCCCGGGCGCTGACAGACGACTTTTCTCACTTGTCAGTTTTCTCGCTTGTCAGCAGAGCTGCTGCCCGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495221.1
CDS TCA 90 bp CCAGCCATGGTCCCGGGCAGCAGCTCTGCTGACAAGCGAGAAAACTaGCAAGTGAGAAAAGTCGTCTGTCAGCGCCCGGGCTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: PAMVPGSSSADKREN*QVRKVVCQRPGWCL
Trigger: CAGACACCAGCCCGGGCGCTGACAGACGACTTTTCTCACTTGTCAGTTTTCTCGCTTGTCAGCAGAGCTGCTGCCCGGGACCATGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495221.1
CDS CCA 90 bp AATGAGGTGGTGAAGGTCCAAGAAGTCTGCCAGCTTCCCTCCGGCTaGTCTGCTCTCCTCCAGCTAGTGGCAGGGCAGCAAGACAGTGCA +
Preference number: 5 (lower is better)
Translates to: NEVVKVQEVCQLPSG*SALLQLVAGQQDSA
Trigger: TGCACTGTCTTGCTGCCCTGCCACTAGCTGGAGGAGAGCAGACCAGCCGGAGGGAAGCTGGCAGACTTCTTGGACCTTCACCACCTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464881.1
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGGCTTCCATTTCCTTTaGCTGCTCCTCTGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTGFHFL*LLLCGQ
Trigger: CTGGCCGCAGAGGAGCAGCAAAAGGAAATGGAAGCC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS TCA 90 bp GACTCCATAGCAGCAGCTCTGCTGACAAGCGAGAAAACTGACAAGTaGGAAAAGTCGTCTGTCAGCGCCCGGGCTGGTGTCTGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: DSIAAALLTSEKTDK*EKSSVSARAGVWAV
Trigger: GACAGCCCAGACACCAGCCCGGGCGCTGACAGACGACTTTTCTCACTTGTCAGTTTTCTCGCTTGTCAGCAGAGCTGCTGCTATGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS TCA 90 bp GGTTGGCGACTCCATAGCAGCAGCTCTGCTGACAAGCGAGAAAACTaGCAAGTGAGAAAAGTCGTCTGTCAGCGCCCGGGCTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: GWRLHSSSSADKREN*QVRKVVCQRPGWCL
Trigger: CAGACACCAGCCCGGGCGCTGACAGACGACTTTTCTCACTTGTCAGTTTTCTCGCTTGTCAGCAGAGCTGCTGCTATGGAGTCGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTTGGCCTTCTCCTCTTaGGGTACCTTGGCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTLAFSS*GTLALH
Trigger: ATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCAA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTACGGAGATGACAGAATaGTTGATCGGGGCACTTCCC +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTTEMTE*LIGALP
Trigger: GGGAAGTGCCCCGATCAACAATTCTGTCATCTCCGT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCAAGCCCTCCTTCCTGTaGCCGGCGTCCGTCATGGCT +
Preference number: 5 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSKPSFL*PASVMA
Trigger: AGCCATGACGGACGCCGGCAACAGGAAGGAGGGCTT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS GCA 90 bp CGTAATCTCCAGTTTAGAAATGAGGTGGTGAAGGTCCAAGAAGTCTaGCAGCTTCCCTCCGGCTGGTCTGCTCTCCTCCAGCTAGTGGCA +
Preference number: 5 (lower is better)
Translates to: RNLQFRNEVVKVQEV*QLPSGWSALLQLVA
Trigger: TGCCACTAGCTGGAGGAGAGCAGACCAGCCGGAGGGAAGCTGGCAGACTTCTTGGACCTTCACCACCTCATTTCTAAACTGGAGATTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464881.1
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCATTTCCTCGTCATCTaGCAGAAGGCGATAAGCTGC +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTHFLVI*QKAISC
Trigger: GCAGCTTATCGCCTTCTGCAAGATGACGAGGAAATG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTCTCCATCTCTCCCGATaGATGTGCACCACTTCCGTC +
Preference number: 5 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHALHLSR*MCTTSV
Trigger: GACGGAAGTGGTGCACATCAATCGGGAGAGATGGAG...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS TCA 90 bp CAGCTCTGCTTCTCTGTCACCCTGTCTGAAGAACTCCTCCAGGAGTaGCATTGTCCAGCGATGATGGAGGTCCCATGCTTTTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: QLCFSVTLSEELLQE*HCPAMMEVPCFCWM
Trigger: CATCCAGCAAAAGCATGGGACCTCCATCATCGCTGGACAATGTCACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAGAAGCAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGAGGCTTCGCGGAGGTaGGGCCTGGAGGTCCCCCAC +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTEASRR*GLEVPH
Trigger: GTGGGGGACCTCCAGGCCCAACCTCCGCGAAGCCTC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTACGTCAAAGGACCACTaGTCCACATCCTTTAATGCC +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTTSKDH*STSFNA
Trigger: GGCATTAAAGGATGTGGACAAGTGGTCCTTTGACGT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTCCCCACTGGCCTCATaGAGGGAAAAGACGTCAAAG +
Preference number: 5 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHASPLAS*REKTSK
Trigger: CTTTGACGTCTTTTCCCTCAATGAGGCCAGTGGGGA...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTCTTCAGCCTGGCTTTaGGCTTCCATTTCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTSSAWL*ASISFC
Trigger: GCAAAAGGAAATGGAAGCCAAAAGCCAGGCTGAAGA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCCAGCATCTTGTACCTaGCAGGATGCTCATCAGTTT +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTPASCT*QDAHQF
Trigger: AAACTGATGAGCATCCTGCAAGGTACAAGATGCTGG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCACCCCTCTTGCTAGTTaGTTGCTGGCGTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSTPLAS*LLASGL
Trigger: CAGCCCAGACGCCAGCAACAAACTAGCAAGAGGGGT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTGGTAGGGAACATTATTaGAGGAGGCTACTACTCCCA +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTGREHY*RRLLLP
Trigger: TGGGAGTAGTAGCCTCCTCAAATAATGTTCCCTACC...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTCGTGAGAACGCTGTTTaGTGCCATCTGTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTRENAV*CHLFSL
Trigger: CAAAGAAAACAGATGGCACAAAACAGCGTTCTCACG...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCCTCTTGCTAGTTTGTaGCTGGCGTCTGGGCTGATC +
Preference number: 5 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSPLASL*LASGLI
Trigger: GATCAGCCCAGACGCCAGCAACAAACTAGCAAGAGG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTAGCCAAATGCATCTCTaGCAAACCTTCACATCCTTC +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTSQMHL*QTFTSF
Trigger: GAAGGATGTGAAGGTTTGCAAGAGATGCATTTGGCT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS CCA 90 bp CCCAGGGATAAGCACAGGGATAGGGATAGAGATAGGGATTGGGATTaGACTCCAGCTCCAAGAGAAAGCACCTCGGGTCTATTCGTATTC +
Preference number: 5 (lower is better)
Translates to: PRDKHRDRDRDRDWD*TPAPRESTSGLFVF
Trigger: GAATACGAATAGACCCGAGGTGCTTTCTCTTGGAGCTGGAGTCCAATCCCAATCCCTATCTCTATCCCTATCCCTGTGCTTATCCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396182.6
CDS CCA 90 bp CTAATGCCCAGGGATAAGCACAGGGATAGGGATAGAGATAGGGATTaGGATTGGACTCCAGCTCCAAGAGAAAGCACCTCGGGTCTATTC +
Preference number: 5 (lower is better)
Translates to: LMPRDKHRDRDRDRD*DWTPAPRESTSGLF
Trigger: GAATAGACCCGAGGTGCTTTCTCTTGGAGCTGGAGTCCAATCCCAATCCCTATCTCTATCCCTATCCCTGTGCTTATCCCTGGGCATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396182.6
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTCAGTCCAACCATGTTaGATGTCCGTCTATACATTC +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTSVQPC*MSVYTF
Trigger: GAATGTATAGACGGACATCAAACATGGTTGGACTGA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCACGGAGATGACAGAATaGTTGATCGGGGCACTTCCC +
Preference number: 5 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSTEMTE*LIGALP
Trigger: GGGAAGTGCCCCGATCAACAATTCTGTCATCTCCGT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCGTCTTTTTCTCAGCTTaGCCAGATGCGCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RAHGFVCGRTIPIAVPTCVFFSA*PDAPSS
Trigger: TGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGAC...GCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCGATGACTTCTCGGCTTaGGAGTTTTTCCCACGAGGG +
Preference number: 5 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSDDFSA*EFFPRG
Trigger: CCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCATC...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCCAGCCTCCAAGGGTCTaGGAGGTGTGTCCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIQPPRV*EVCPAV
Trigger: CACAGCAGGACACACCTCCAAGACCCTTGGAGGCTG...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACATATCCCCAGCGACCTTaGACACCCAAAACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTYPQRP*TPKTFP
Trigger: TGGGAAAGTTTTGGGTGTCAAAGGTCGCTGGGGATA...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS TCA 90 bp GAAATTGTTGGTGGTTCCGGTATGCTCGTAGTCATGGATGGCAGCTaGGAAGATTATAGCAAAGATCTCCAGCTCCGTCAGCCAGTTCGC +
Preference number: 5 (lower is better)
Translates to: EIVGGSGMLVVMDGS*EDYSKDLQLRQPVR
Trigger: GCGAACTGGCTGACGGAGCTGGAGATCTTTGCTATAATCTTCTCAGCTGCCATCCATGACTACGAGCATACCGGAACCACCAACAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS TCA 90 bp TCACCCTGTCTGAAGAACTCCTCCAGGAGTGACATTGTCCAGCGATaGTGGAGGTCCCATGCTTTTGCTGGATGGCTAATATCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: SPCLKNSSRSDIVQR*WRSHAFAGWLISAV
Trigger: TACAGCAGATATTAGCCATCCAGCAAAAGCATGGGACCTCCATCATCGCTGGACAATGTCACTCCTGGAGGAGTTCTTCAGACAGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAGAGGCTTCGCGGAGGTaGGGCCTGGAGGTCCCCCAC +
Preference number: 5 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEEASRR*GLEVPH
Trigger: GTGGGGGACCTCCAGGCCCAACCTCCGCGAAGCCTC...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTTATCCAGGAGTCTCCTaGTTTCATCAATATACACAG +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTYPGVS*FHQYTQ
Trigger: CTGTGTATATTGATGAAACAAGGAGACTCCTGGATA...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCGAGATGACAGAATTGTaGATCGGGGCACTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSEMTEL*IGALPS
Trigger: AGAGGGAAGTGCCCCGATCAACAATTCTGTCATCTC...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGGCTTCCATTTCCTTTaGCTGCTCCTCTGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIGFHFL*LLLCGQ
Trigger: CTGGCCGCAGAGGAGCAGCAAAAGGAAATGGAAGCC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGCAGCCTCCAAGGGTCTaGGAGGTGTGTCCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: WIPPTTVRTIRISRALDMQPPRV*EVCPAV
Trigger: CACAGCAGGACACACCTCCAAGACCCTTGGAGGCTG...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACAGGATGAGTCTCCAGTaGGCACTGCCTCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYRMSLQ*ALPLAC
Trigger: GCAGGCCAGAGGCAGTGCCAACTGGAGACTCATCCT...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS TCA 90 bp GAAATTGTTGGTGGTTCCGGTATGCTCGTAGTCATGGATGGCAGCTaGGAAGATTATAGCAAAGATCTCCAGCTCCGTCAGCCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: EIVGGSGMLVVMDGS*EDYSKDLQLRQPVL
Trigger: CAGAACTGGCTGACGGAGCTGGAGATCTTTGCTATAATCTTCTCAGCTGCCATCCATGACTACGAGCATACCGGAACCACCAACAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478736.1
CDS-3UTR CAA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGCATTTCCTCGTCATCTaGCAGAAGGCGATAAGCTGC +
Preference number: 5 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLHFLVI*QKAISC
Trigger: GCAGCTTATCGCCTTCTGCAAGATGACGAGGAAATG...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCCCTCCAGGAGTGACATaGTCCAGCGATGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIPPGVT*SSDDGG
Trigger: ACCTCCATCATCGCTGGACAATGTCACTCCTGGAGG...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCCCTCCAGGAGTGACATaGTCCAGCGATGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: RDWNHHLCGDECQHGCIIPPGVT*SSDDGG
Trigger: ACCTCCATCATCGCTGGACAATGTCACTCCTGGAGG...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCCCTCCAGGAGTGACATaGTCCAGCGATGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIPPGVT*SSDDGG
Trigger: ACCTCCATCATCGCTGGACAATGTCACTCCTGGAGG...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCCTCCATCTCTCCCGATaGATGTGCACCACTTCCGTC +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDILHLSR*MCTTSV
Trigger: GACGGAAGTGGTGCACATCAATCGGGAGAGATGGAG...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGGGCTTCCATTTCCTTTaGCTGCTCCTCTGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: WIPPTTVRTIRISRALDMGFHFL*LLLCGQ
Trigger: CTGGCCGCAGAGGAGCAGCAAAAGGAAATGGAAGCC...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GTCCTGCTGTGGCCAGTGGGTGCTGAGAAGCAGATAGGTAGACCCTCCTTCACTAATAACTGCAGTTTATaGGAAATGAACTGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: VLLWPVGAEKQIGRPSFTNNCSL*EMNCRE
Trigger: TTCCCTGCAGTTCATTTCCAATAAACTGCAGTTATT...AGTGAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATGCGCTCCGGCATTTTTaGAAGCCCTCCTTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDALRHF*KPSFLL
Trigger: CAACAGGAAGGAGGGCTTCAAAAAATGCCGGAGCGC...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CAA 90 bp AGAGACTGGAATCATCATCTTTGCGGTGATGAATGTCAGCATGGCTGTATCATCACCAACTACCCTGTTTaGACAGCACCCACCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RDWNHHLCGDECQHGCIITNYPV*TAPTLS
Trigger: GGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGT...GATGATACAGCCATGCTGACATTCATCACCGCAAAGATGATGATTCCAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGCAGGTGTGTAAGCCCTaGCTCTGTGTGTGTAAACCA +
Preference number: 5 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLQVCKP*LCVCKP
Trigger: TGGTTTACACACACAGAGCAAGGGCTTACACACCTG...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS TCA 90 bp AGGATTTTTGTGCTTGCTGTATCCCACTTCCAGGGCCTCCACAAATaGGACAAGTGCAGAAATGGGGATCTTGAAACGGCTGATCAGATC +
Preference number: 5 (lower is better)
Translates to: RIFVLAVSHFQGLHK*DKCRNGDLETADQI
Trigger: GATCTGATCAGCCGTTTCAAGATCCCCATTTCTGCACTTGTCTCATTTGTGGAGGCCCTGGAAGTGGGATACAGCAAGCACAAAAATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCTCTGAACCAGAGGTCTaGACACCTGATCGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDISEPEV*TPDRLA
Trigger: TGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGA...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCGATGACTTCTCGGCTTaGGAGTTTTTCCCACGAGGG +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIDDFSA*EFFPRG
Trigger: CCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCATC...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACAGCCTCCAAGGGTCTaGGAGGTGTGTCCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLQPPRV*EVCPAV
Trigger: CACAGCAGGACACACCTCCAAGACCCTTGGAGGCTG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATCCTCTTGCTAGTTTGTaGCTGGCGTCTGGGCTGATC +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNPLASL*LASGLI
Trigger: GATCAGCCCAGACGCCAGCAACAAACTAGCAAGAGG...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACATGTAGACTTTCTATTTaGACTGGCCAAAAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTCRLSI*TGQKAP
Trigger: TGGGGCTTTTTGGCCAGTCAAAATAGAAAGTCTACA...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AGAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTGGAAATATTGCTTTaGCAGTCAGCACTGATTTGG +
Preference number: 5 (lower is better)
Translates to: RAHGFVCGRTIPIAVPTCLEILL*QSALIW
Trigger: CCAAATCAGTGCTGACTGCAAAAGCAATATTTCCAA...GCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GAGCGCATGGTTTCGTCTGTGGTAGGACTATCCCTATTGCTGTCCCCACATGCTTCAGTGGCACAATTCTaGCTTAATTCAGACATTCCT +
Preference number: 5 (lower is better)
Translates to: ERMVSSVVGLSLLLSPHASVAQF*LNSDIP
Trigger: AGGAATGTCTGAATTAAGCAAGAATTGTGCCACTGA...AGCATGTGGGGACAGCAATAGGGATAGTCCTACCACAGACGAAACCATGCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACAACTTTCCCATACGAATaGCATGGAACAAGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTTFPYE*HGTRCF
Trigger: AAAGCACCTTGTTCCATGCAATTCGTATGGGAAAGT...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS TCA 90 bp CTGATGCTATTCAAACTCGAACGCCTCTGTCCTGTCCCACCAGTTTaGGAGGTTTCATCGATTAATGGACTCACAATCTTCTCGGTCATG +
Preference number: 5 (lower is better)
Translates to: LMLFKLERLCPVPPV*EVSSINGLTIFSVM
Trigger: CATGACCGAGAAGATTGTGAGTCCATTAATCGATGAAACCTCTCAAACTGGTGGGACAGGACAGAGGCGTTCGAGTTTGAATAGCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS GCA 90 bp TTCTTTCTCAAAGTCTTCAGCTTGCTGACAACACACCCACAGTGCTaGCTTTCTACCCTGCAGCTGGTAAGCTATTGCCAAACACAAGTT +
Preference number: 5 (lower is better)
Translates to: FFLKVFSLLTTHPQC*LSTLQLVSYCQTQV
Trigger: AACTTGTGTTTGGCAATAGCTTACCAGCTGCAGGGTAGAAAGGCAGCACTGTGGGTGTGTTGTCAGCAAGCTGAAGACTTTGAGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478736.1
CDS GCA 90 bp TGTTTCTTTCTCAAAGTCTTCAGCTTGCTGACAACACACCCACAGTaGTGCCTTTCTACCCTGCAGCTGGTAAGCTATTGCCAAACACAA +
Preference number: 5 (lower is better)
Translates to: CFFLKVFSLLTTHPQ*CLSTLQLVSYCQTQ
Trigger: TTGTGTTTGGCAATAGCTTACCAGCTGCAGGGTAGAAAGGCAGCACTGTGGGTGTGTTGTCAGCAAGCTGAAGACTTTGAGAAAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478736.1
CDS-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCCTCTCTCTAATTGTTaGACCAAAGACCGTAATCTC +
Preference number: 5 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSPLSNC*TKDRNL
Trigger: GAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTCCCCACTGGCCTCATaGAGGGAAAAGACGTCAAAG +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNSPLAS*REKTSK
Trigger: CTTTGACGTCTTTTCCCTCAATGAGGCCAGTGGGGA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTTGACACCTGATCGCTaGGCATCTGACGAGCTGATG +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNLTPDR*ASDELM
Trigger: CATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGTTGACACCTGATCGCTaGGCATCTGACGAGCTGATG +
Preference number: 5 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHELTPDR*ASDELM
Trigger: CATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAA...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGTCTGAACCAGAGGTCTaGACACCTGATCGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHESEPEV*TPDRLA
Trigger: TGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGA...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCGAGATGACAGAATTGTaGATCGGGGCACTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIEMTEL*IGALPS
Trigger: AGAGGGAAGTGCCCCGATCAACAATTCTGTCATCTC...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACACTCCATCTCTCCCGATaGATGTGCACCACTTCCGTC +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTLHLSR*MCTTSV
Trigger: GACGGAAGTGGTGCACATCAATCGGGAGAGATGGAG...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACATTGGCCTTCTCCTCTTaGGGTACCTTGGCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTLAFSS*GTLALH
Trigger: ATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCAA...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGTTGGCCTTCTCCTCTTaGGGTACCTTGGCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLLAFSS*GTLALH
Trigger: ATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCAA...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAGGCTTCCATTTCCTTTaGCTGCTCCTCTGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIGFHFL*LLLCGQ
Trigger: CTGGCCGCAGAGGAGCAGCAAAAGGAAATGGAAGCC...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCCCGTGTTCCATTGACTaGATTCTTAGTTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSPCSID*ILSFSR
Trigger: TCTGGAGAAACTAAGAATCAAGTCAATGGAACACGG...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGAATTCTTCAATCTCCTaGGTTGGCGACTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLNSSIS*VGDSIA
Trigger: AGCTATGGAGTCGCCAACCAAGGAGATTGAAGAATT...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GCTGCCTACCAACTACCCTGTTTTGACAGCACCCACCCTCTCCAATTTCTCACAAGGTATTTCAGAGAGTaGCTCTCAAATTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: AAYQLPCFDSTHPLQFLTRYFRE*LSNSSI
Trigger: GATTGAAGAATTTGAGAGCAACTCTCTGAAATACCT...TGTGAGAAATTGGAGAGGGTGGGTGCTGTCAAAACAGGGTAGTTGGTAGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATCTCGATCTGTTCCGGTaGCAGGTATTTCAGAGAGTT +
Preference number: 5 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDLDLFR*QVFQRV
Trigger: AACTCTCTGAAATACCTGCAACCGGAACAGATCGAG...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCACGTCAAAGGACCACTaGTCCACATCCTTTAATGCC +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDITSKDH*STSFNA
Trigger: GGCATTAAAGGATGTGGACAAGTGGTCCTTTGACGT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACATCCCCACTGGCCTCATaGAGGGAAAAGACGTCAAAG +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTSPLAS*REKTSK
Trigger: CTTTGACGTCTTTTCCCTCAATGAGGCCAGTGGGGA...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGCATTTCCTCGTCATCTaGCAGAAGGCGATAAGCTGC +
Preference number: 5 (lower is better)
Translates to: WIPPTTVRTIRISRALDMHFLVI*QKAISC
Trigger: GCAGCTTATCGCCTTCTGCAAGATGACGAGGAAATG...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACCCTCCAGGAGTGACATaGTCCAGCGATGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNPPGVT*SSDDGG
Trigger: ACCTCCATCATCGCTGGACAATGTCACTCCTGGAGG...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGGAGATGACAGAATTGTaGATCGGGGCACTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEEMTEL*IGALPS
Trigger: AGAGGGAAGTGCCCCGATCAACAATTCTGTCATCTC...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAACGGAGATGACAGAATaGTTGATCGGGGCACTTCCC +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTTEMTE*LIGALP
Trigger: GGGAAGTGCCCCGATCAACAATTCTGTCATCTCCGT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCCTCCATCTCTCCCGATaGATGTGCACCACTTCCGTC +
Preference number: 5 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLLHLSR*MCTTSV
Trigger: GACGGAAGTGGTGCACATCAATCGGGAGAGATGGAG...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTTGGCCTTCTCCTCTTaGGGTACCTTGGCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLLAFSS*GTLALH
Trigger: ATGGAGGGCCAAGGTACCCAAAGAGGAGAAGGCCAA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGGATGACTTCTCGGCTTaGGAGTTTTTCCCACGAGGG +
Preference number: 5 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLDDFSA*EFFPRG
Trigger: CCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCATC...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATCCAGCATCTTGTACCTaGCAGGATGCTCATCAGTTT +
Preference number: 5 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDPASCT*QDAHQF
Trigger: AAACTGATGAGCATCCTGCAAGGTACAAGATGCTGG...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAAGGAGAGGACACTAAACTCTTTACAATCAAGCCTGGAAGGTCGAGGCCATCCACTAAATTCCGGAACTaGCTCAACTTGAATAACTGC +
Preference number: 5 (lower is better)
Translates to: EGEDTKLFTIKPGRSRPSTKFRN*LNLNNC
Trigger: GCAGTTATTCAAGTTGAGCAAGTTCCGGAATTTAGT...GGATGGCCTCGACCTTCCAGGCTTGATTGTAAAGAGTTTAGTGTCCTCTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCGGTAGGGAACATTATTaGAGGAGGCTACTACTCCCA +
Preference number: 5 (lower is better)
Translates to: MPSEQGPATSYRQNRMKIGREHY*RRLLLP
Trigger: TGGGAGTAGTAGCCTCCTCAAATAATGTTCCCTACC...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGGGCCAGACAGATGCCTaGAAAGCCAGGTCATTAGCA +
Preference number: 5 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLGQTDA*KARSLA
Trigger: TGCTAATGACCTGGCTTTCAAGGCATCTGTCTGGCC...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACGTAGGACTATCCCTATaGCTGTCCCCACATGCTAGT +
Preference number: 5 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYVGLSL*LSPHAS
Trigger: ACTAGCATGTGGGGACAGCAATAGGGATAGTCCTAC...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS TCA 90 bp TTCCCACGAGGGTTGTCACTTTTGTTTGCCCGTGTTCCATTGACTTaGTTCTTAGTTTCTCCAGACGTCTTTTTCTCAGCTTTGCCAGAT +
Preference number: 5 (lower is better)
Translates to: FPRGLSLLFARVPLT*FLVSPDVFFSALPD
Trigger: ATCTGGCAAAGCTGAGAAAAAGACGTCTGGAGAAACTAAGAATCAAGTCAATGGAACACGGGCAAACAAAAGTGACAACCCTCGTGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
ENST00000479980.1
CDS-3UTR CAA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACACGTCAAAGGACCACTaGTCCACATCCTTTAATGCC +
Preference number: 5 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYTSKDH*STSFNA
Trigger: GGCATTAAAGGATGTGGACAAGTGGTCCTTTGACGT...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTCCCCACTGGCCTCATaGAGGGAAAAGACGTCAAAG +
Preference number: 5 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLSPLAS*REKTSK
Trigger: CTTTGACGTCTTTTCCCTCAATGAGGCCAGTGGGGA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATGCAGAAATGGGGATCTaGAAACGGCTGATCAGATCA +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNAEMGI*KRLIRS
Trigger: TGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGC...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGGCAGAAATGGGGATCTaGAAACGGCTGATCAGATCA +
Preference number: 5 (lower is better)
Translates to: WIPPTTVRTIRISRALDMAEMGI*KRLIRS
Trigger: TGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGC...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGACACCTGATCGCTaGGCATCTGACGAGCTGATG +
Preference number: 5 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNLTPDR*ASDELM
Trigger: CATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAA...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATATCTGAACCAGAGGTCTaGACACCTGATCGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLISEPEV*TPDRLA
Trigger: TGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGA...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTCTGAACCAGAGGTCTaGACACCTGATCGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNSEPEV*TPDRLA
Trigger: TGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGA...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGTCTTCAGCCTGGCTTTaGGCTTCCATTTCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHESSAWL*ASISFC
Trigger: GCAAAAGGAAATGGAAGCCAAAAGCCAGGCTGAAGA...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGGTCTTTTTCTCAGCTTaGCCAGATGCGCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: WIPPTTVRTIRISRALDMVFFSA*PDAPSS
Trigger: TGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGAC...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGTTTTTCCCACGAGGGTaGTCACTTTTGTTTGCCCGT +
Preference number: 5 (lower is better)
Translates to: WIPPTTVRTIRISRALDMFFPRG*SLLFAR
Trigger: ACGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAA...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTTTTTCCCACGAGGGTaGTCACTTTTGTTTGCCCGT +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNFFPRG*SLLFAR
Trigger: ACGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACGATGACTTCTCGGCTTaGGAGTTTTTCCCACGAGGG +
Preference number: 5 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNDDFSA*EFFPRG
Trigger: CCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCATC...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGCCAGCATCTTGTACCTaGCAGGATGCTCATCAGTTT +
Preference number: 5 (lower is better)
Translates to: WIPPTTVRTIRISRALDMPASCT*QDAHQF
Trigger: AAACTGATGAGCATCCTGCAAGGTACAAGATGCTGG...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCAGCCAAATGCATCTCTaGCAAACCTTCACATCCTTC +
Preference number: 5 (lower is better)
Translates to: MPSEQGPATSYRQNRMKISQMHL*QTFTSF
Trigger: GAAGGATGTGAAGGTTTGCAAGAGATGCATTTGGCT...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAGATCCCACCTGTAATTaGGTCTCAAGGGGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIDPTCN*VSRGLQ
Trigger: TTGCAGCCCCCTTGAGACCAAATTACAGGTGGGATC...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGCTGTTGGGGAACATTTaGGCAAGGCAAAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: IWITLVKQHLREQNTLPQLLGNI*ARQRSR
Trigger: CCTGGACCTTTGCCTTGCCAAAATGTTCCCCAACAG...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATATTCTCACAGTCCCCATaGCTCCTTCCTGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIFSQSP*LLPVLL
Trigger: CAGCAAGACAGGAAGGAGCAATGGGGACTGTGAGAA...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACGGGTTTTGGTTCTGCTaGCCTCTCTCTTTTGAGTCT +
Preference number: 5 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYGFWFC*PLSFES
Trigger: AGACTCAAAAGAGAGAGGCAAGCAGAACCAAAACCC...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGAATTCTTCAATCTCCTaGGTTGGCGACTCCATAGCA +
Preference number: 5 (lower is better)
Translates to: WIPPTTVRTIRISRALDMNSSIS*VGDSIA
Trigger: TGCTATGGAGTCGCCAACCAAGGAGATTGAAGAATT...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACACTCGATCTGTTCCGGTaGCAGGTATTTCAGAGAGTT +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTLDLFR*QVFQRV
Trigger: AACTCTCTGAAATACCTGCAACCGGAACAGATCGAG...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCTCAGTCCAACCATGTTaGATGTCCGTCTATACATTC +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDISVQPC*MSVYTF
Trigger: GAATGTATAGACGGACATCAAACATGGTTGGACTGA...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATTCAGTCCAACCATGTTaGATGTCCGTCTATACATTC +
Preference number: 5 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDSVQPC*MSVYTF
Trigger: GAATGTATAGACGGACATCAAACATGGTTGGACTGA...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGCAGAAATGGGGATCTaGAAACGGCTGATCAGATCA +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTAEMGI*KRLIRS
Trigger: TGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGTTGACACCTGATCGCTaGGCATCTGACGAGCTGATG +
Preference number: 5 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVLTPDR*ASDELM
Trigger: CATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAA...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGACGGAGATGACAGAATaGTTGATCGGGGCACTTCCC +
Preference number: 5 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELTEMTE*LIGALP
Trigger: GGGAAGTGCCCCGATCAACAATTCTGTCATCTCCGT...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGTCTTTTTCTCAGCTTaGCCAGATGCGCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTVFFSA*PDAPSS
Trigger: TGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGAC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp GAGAACAATCAGGATCTCAAGGGCTTTAGATATGTAGCGTGCTGTGAAGAGGATCCGTGTTCCATTGACTaGATTCTTAGTTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ENNQDLKGFRYVACCEEDPCSID*ILSFSR
Trigger: TCTGGAGAAACTAAGAATCAAGTCAATGGAACACGG...ATCCTCTTCACAGCACGCTACATATCTAAAGCCCTTGAGATCCTGATTGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATCGTGAGAACGCTGTTTaGTGCCATCTGTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNRENAV*CHLFSL
Trigger: CAAAGAAAACAGATGGCACAAAACAGCGTTCTCACG...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCAAGCTATCTCTAGTCTaGAGCCTTTCCTTGCTACTT +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIKLSLV*SLSLLL
Trigger: AAGTAGCAAGGAAAGGCTCAAGACTAGAGATAGCTT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAGGTAGGGAACATTATTaGAGGAGGCTACTACTCCCA +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTGREHY*RRLLLP
Trigger: TGGGAGTAGTAGCCTCCTCAAATAATGTTCCCTACC...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCGAAAAGAATACAGATTaGTTCCCCAGGAACATGGCT +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIEKNTD*FPRNMA
Trigger: AGCCATGTTCCTGGGGAACAAATCTGTATTCTTTTC...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCCAGCCTTTTTACAAATGTCCAAGGAGGATCTTTAGAGGCCTGTTAGAAATGAGTCTCTaGTCTGCTGCCATAAACTAT +
Preference number: 5 (lower is better)
Translates to: WRSSQPFYKCPRRIFRGLLEMSL*SAAINY
Trigger: ATAGTTTATGGCAGCAGACAAGAGACTCATTTCTAA...CAGGCCTCTAAAGATCCTCCTTGGACATTTGTAAAAAGGCTGGCTGCTTCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGATGAGGGGAATCTGGTaGTACAGTGGGCACAAGAGC +
Preference number: 5 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELMRGIW*YSGHKS
Trigger: GCTCTTGTGCCCACTGTACAACCAGATTCCCCTCAT...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATATCCATTTTGAAATATaGAAGCGACTGATGGGGACG +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNIHFEI*KRLMGT
Trigger: CGTCCCCATCAGTCGCTTCAATATTTCAAAATGGAT...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCACGTCAAAGGACCACTaGTCCACATCCTTTAATGCC +
Preference number: 5 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLTSKDH*STSFNA
Trigger: GGCATTAAAGGATGTGGACAAGTGGTCCTTTGACGT...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGGAGATGACAGAATTGTaGATCGGGGCACTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELEMTEL*IGALPS
Trigger: AGAGGGAAGTGCCCCGATCAACAATTCTGTCATCTC...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTCTTCAGCCTGGCTTTaGGCTTCCATTTCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLSSAWL*ASISFC
Trigger: GCAAAAGGAAATGGAAGCCAAAAGCCAGGCTGAAGA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAGTCTTTTTCTCAGCTTaGCCAGATGCGCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLVFFSA*PDAPSS
Trigger: TGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGAC...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCTTTTTCCCACGAGGGTaGTCACTTTTGTTTGCCCGT +
Preference number: 5 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLFFPRG*SLLFAR
Trigger: ACGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAA...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TCACATCCTTCAAAGTACATGAGGTTATTGGGCATGAGGCACAATCTTCATGAGAAGTACATGAGGTTATaGGGCATGAGGCACAATCTT +
Preference number: 5 (lower is better)
Translates to: SHPSKYMRLLGMRHNLHEKYMRL*GMRHNL
Trigger: AAGATTGTGCCTCATGCCCAATAACCTCATGTACTT...CTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTGAAGGATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATAAGCTATCTCTAGTCTaGAGCCTTTCCTTGCTACTT +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNKLSLV*SLSLLL
Trigger: AAGTAGCAAGGAAAGGCTCAAGACTAGAGATAGCTT...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCACTAAATTCCGGAACTaGCTCAACTTGAATAACTGC +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDITKFRN*LNLNNC
Trigger: GCAGTTATTCAAGTTGAGCAAGTTCCGGAATTTAGT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATGAAAAGAATACAGATTaGTTCCCCAGGAACATGGCT +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNEKNTD*FPRNMA
Trigger: AGCCATGTTCCTGGGGAACAAATCTGTATTCTTTTC...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCCTCAGCCATGAGATGTaGCCGAAGTTTACTCCAAAC +
Preference number: 5 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLLSHEM*PKFTPN
Trigger: GTTTGGAGTAAACTTCGGCAACATCTCATGGCTGAG...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATCCTCTCTCTAATTGTTaGACCAAAGACCGTAATCTG +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNPLSNC*TKDRNL
Trigger: CAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGG...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS-3UTR CAA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGCTTCAGATCTTTCTGTaGGGGAACATTTTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLLQIFL*GNILAR
Trigger: CCTTGCCAAAATGTTCCCCAACAGAAAGATCTGAAG...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS TCA 90 bp GCTGAGAAGATTATAGCAAAGATCTCCAGCTCCGTCAGCCAGTTCTaGAAGGAGATTACAGAGCAATCAGATAATCTGTTTCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: AEKIIAKISSSVSQF*KEITEQSDNLFLSQ
Trigger: TTGAGAAAGAAACAGATTATCTGATTGCTCTGTAATCTCCTTTCAGAACTGGCTGACGGAGCTGGAGATCTTTGCTATAATCTTCTCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478736.1
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCAGGTATTTCAGAGAGTaGCTCTCAAATTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDIRYFRE*LSNSSI
Trigger: GATTGAAGAATTTGAGAGCAACTCTCTGAAATACCT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR CAA 90 bp AAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAACTTGAATTATCCAGGAGTCTCCTaGTTTCATCAATATACACAG +
Preference number: 5 (lower is better)
Translates to: KLPNSMVGTKFRNLLNLNYPGVS*FHQYTQ
Trigger: CTGTGTATATTGATGAAACAAGGAGACTCCTGGATA...ATTCAAGTTGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGGCAGAAATGGGGATCTaGAAACGGCTGATCAGATCA +
Preference number: 5 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVAEMGI*KRLIRS
Trigger: TGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGC...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATGCCATCCGAGCAAGGACCTGCAACTAGTTATAGACAGAATAGGATGAAGATCCTTCATTGCTTTGATTaGTTGGAAGTGACAAGACAT +
Preference number: 5 (lower is better)
Translates to: MPSEQGPATSYRQNRMKILHCFD*LEVTRH
Trigger: ATGTCTTGTCACTTCCAACAAATCAAAGCAATGAAG...GATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGTCTTCAGCCTGGCTTTaGGCTTCCATTTCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVSSAWL*ASISFC
Trigger: GCAAAAGGAAATGGAAGCCAAAAGCCAGGCTGAAGA...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACGTGAGAACGCTGTTTaGTGCCATCTGTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLRENAV*CHLFSL
Trigger: CAAAGAAAACAGATGGCACAAAACAGCGTTCTCACG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTAATAAAAACACCCCTCTaGCTAGTTTGTTGCTGGCGT +
Preference number: 5 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLIKTPL*LVCCWR
Trigger: ACGCCAGCAACAAACTAGCAAGAGGGGTGTTTTTAT...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACAAAGTACATGAGGTTATaGGGCATGAGGCACAATCTT +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTKYMRL*GMRHNL
Trigger: AAGATTGTGCCTCATGCCCAATAACCTCATGTACTT...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGGCTCAGAATTTTACACCCTCTTGGCCTAGGACCACAAAATCAAACTGACATCAATAACTGCAGTTTATaGGAAATGAACTGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: RLRILHPLGLGPQNQTDINNCSL*EMNCRE
Trigger: TTCCCTGCAGTTCATTTCCAATAAACTGCAGTTATT...GATGTCAGTTTGATTTTGTGGTCCTAGGCCAAGAGGGTGTAAAATTCTGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCAATTCTTCAATCTCCTaGGTTGGCGACTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLNSSIS*VGDSIA
Trigger: AGCTATGGAGTCGCCAACCAAGGAGATTGAAGAATT...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396191.6
CDS-3UTR CAA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTCTCACGTTGTTTGTTTaGCTCAGGGGAATATCCCCC +
Preference number: 5 (lower is better)
Translates to: KMQRIICHISLILIPLALLTLFV*LRGISP
Trigger: GGGGGATATTCCCCTGAGCAAAACAAACAACGTGAG...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGTCATGTGCTTCACTCTaGGGAAGGACTCAGAGATTC +
Preference number: 5 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVSCASL*GRTQRF
Trigger: GAATCTCTGAGTCCTTCCCAAGAGTGAAGCACATGA...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGATTGCTCCTTCCTGTCTaGCTGATACAAAGGCCCACT +
Preference number: 5 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRLLLPV*LIQRPT
Trigger: AGTGGGCCTTTGTATCAGCAAGACAGGAAGGAGCAA...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp GTAATTTGGTCTCAAGGGGGCTGCAATGTTATTCTCTTTCCATGCTACATCTACAATTCAAGGGCTAACTaGTCACATTTTATCCAGGGA +
Preference number: 5 (lower is better)
Translates to: VIWSQGGCNVILFPCYIYNSRAN*SHFIQG
Trigger: TCCCTGGATAAAATGTGACAAGTTAGCCCTTGAATT...GTAGATGTAGCATGGAAAGAGAATAACATTGCAGCCCCCTTGAGACCAAATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp TGGATTCCACCAACAACTGTGAGAACAATCAGGATCTCAAGGGCTTTAGATATGAGGTATTTCAGAGAGTaGCTCTCAAATTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: WIPPTTVRTIRISRALDMRYFRE*LSNSSI
Trigger: GATTGAAGAATTTGAGAGCAACTCTCTGAAATACCT...CATATCTAAAGCCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR CAA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTCTCGATCTGTTCCGGTaGCAGGTATTTCAGAGAGTT +
Preference number: 5 (lower is better)
Translates to: KMQRIICHISLILIPLALLDLFR*QVFQRV
Trigger: AACTCTCTGAAATACCTGCAACCGGAACAGATCGAG...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACCTCTCTCTAATTGTTaGACCAAAGACCGTAATCTC +
Preference number: 5 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLPLSNC*TKDRNL
Trigger: GAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396191.6
CDS-3UTR CAA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGCCTCTCTCTAATTGTTaGACCAAAGACCGTAATCTC +
Preference number: 5 (lower is better)
Translates to: IWITLVKQHLREQNTLPQPLSNC*TKDRNL
Trigger: GAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGG...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACTTGCTCCCGTGTTCCATTGACTaGATTCTTAGTTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: IINKLPNSMVGTKFRNLLPCSID*ILSFSR
Trigger: TCTGGAGAAACTAAGAATCAAGTCAATGGAACACGG...GAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAATTTTTCCCACGAGGGTaGTCACTTTTGTTTGCCCGT +
Preference number: 5 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEFFPRG*SLLFAR
Trigger: ACGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAA...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACAAGTACATGAGGTTATaGGGCATGAGGCACAATCTT +
Preference number: 5 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNKYMRL*GMRHNL
Trigger: AAGATTGTGCCTCATGCCCAATAACCTCATGTACTT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGTATCCAGGAGTCTCCTaGTTTCATCAATATACACAG +
Preference number: 5 (lower is better)
Translates to: IWITLVKQHLREQNTLPQYPGVS*FHQYTQ
Trigger: CTGTGTATATTGATGAAACAAGGAGACTCCTGGATA...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTATATCCAGGAGTCTCCTaGTTTCATCAATATACACAG +
Preference number: 5 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLYPGVS*FHQYTQ
Trigger: CTGTGTATATTGATGAAACAAGGAGACTCCTGGATA...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AGAGCATTCTCAGAATACATCCAGAAATACCTTCCTTATTCCTCCAAAGAATTGTCAGTCCAACCATGTTaGATGTCCGTCTATACATTC +
Preference number: 5 (lower is better)
Translates to: RAFSEYIQKYLPYSSKELSVQPC*MSVYTF
Trigger: GAATGTATAGACGGACATCAAACATGGTTGGACTGA...CAATTCTTTGGAGGAATAAGGAAGGTATTTCTGGATGTATTCTGAGAATGCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AGACTCATAAAATCCCACTTTACTTGCACTCCCTTAGATCCCACCTGTAATTTGCTTCATTGCTTTGATTaGTTGGAAGTGACAAGACAT +
Preference number: 5 (lower is better)
Translates to: RLIKSHFTCTPLDPTCNLLHCFD*LEVTRH
Trigger: ATGTCTTGTCACTTCCAACAAATCAAAGCAATGAAG...CAAATTACAGGTGGGATCTAAGGGAGTGCAAGTAAAGTGGGATTTTATGAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAAAGAATACAGATTTGTTCCCCAGGAACATGGCTTCCAACATCAAGAAGCACACTTCATTGCTTTGATTaGTTGGAAGTGACAAGACAT +
Preference number: 5 (lower is better)
Translates to: KRIQICSPGTWLPTSRSTLHCFD*LEVTRH
Trigger: ATGTCTTGTCACTTCCAACAAATCAAAGCAATGAAG...TGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAATCTGTATTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAATCCAGATATGGGTCTTaGTGGAAGAAGGAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNESRYGS*WKKEKK
Trigger: CTTCTTCTCCTTCTTCCACAAAGACCCATATCTGGA...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTCAGGTAATATGTCTCTaGATACCCAGAGGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: KMQRIICHISLILIPLALQVICL*IPRGRF
Trigger: AAACCTCCCTCTGGGTATCAAGAGACATATTACCTG...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAATCAGCTAGTCATTGGTaGAGGTTTGGGTTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNESASHW*RFGFWF
Trigger: GAACCAAAACCCAAACCTCAACCAATGACTAGCTGA...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATCATACATCTTTCAGTCCAGGTCATCCACTGCACAATCGTTCCTTGTTTAATAGGCATTTGGATAACATaGGTTAAGCAGCATCTTAGA +
Preference number: 5 (lower is better)
Translates to: IIHLSVQVIHCTIVPCLIGIWIT*VKQHLR
Trigger: TCTAAGATGCTGCTTAACCAATGTTATCCAAATGCC...TATTAAACAAGGAACGATTGTGCAGTGGATGACCTGGACTGAAAGATGTATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTATCCATTTTGAAATATaGAAGCGACTGATGGGGACG +
Preference number: 5 (lower is better)
Translates to: KMQRIICHISLILIPLALIHFEI*KRLMGT
Trigger: CGTCCCCATCAGTCGCTTCAATATTTCAAAATGGAT...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp TGGAGAGTTCATCCTGATTATGAAATGCTCTTAGCTACTTCTGTTATGCACCTACTTCATTGCTTTGATTaGTTGGAAGTGACAAGACAT +
Preference number: 5 (lower is better)
Translates to: WRVHPDYEMLLATSVMHLLHCFD*LEVTRH
Trigger: ATGTCTTGTCACTTCCAACAAATCAAAGCAATGAAG...TAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCAGGATGAACTCTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAACCGTGTTCCATTGACTaGATTCTTAGTTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEPCSID*ILSFSR
Trigger: TCTGGAGAAACTAAGAATCAAGTCAATGGAACACGG...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAGCACATTATAAATAAACTGCCCAATAGCATGGTAGGCACTAAATTCCGGAACAATAACTGCAGTTTATaGGAAATGAACTGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: KHIINKLPNSMVGTKFRNNNCSL*EMNCRE
Trigger: TTCCCTGCAGTTCATTTCCAATAAACTGCAGTTATT...GTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396191.6
ENST00000396193.5
CDS-3UTR CAA 90 bp AAAGTTTCCACTCGGATTCTCAGTAAATCCACTGACGTTTTATATAGATTGGTGGAGTTACATGGAGTTTaGTTTTGCTTCACTGAGAGT +
Preference number: 5 (lower is better)
Translates to: KVSTRILSKSTDVLYRLVELHGV*FCFTES
Trigger: ACTCTCAGTGAAGCAAAACAAAACTCCATGTAACTC...CACCAATCTATATAAAACGTCAGTGGATTTACTGAGAATCCGAGTGGAAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ATTTGGATAACATTGGTTAAGCAGCATCTTAGAGAACAGAACACTCTTCCTCAGAATGTTTGTCCCAAATaGCTGCTCAACTTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: IWITLVKQHLREQNTLPQNVCPK*LLNLKK
Trigger: TTTCTTCAAGTTGAGCAGCAATTTGGGACAAACATT...CTGAGGAAGAGTGTTCTGTTCTCTAAGATGCTGCTTAACCAATGTTATCCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp ACAATGGGATCCTGTCAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATTGGTCTTCAACTTTaGGATTACCGTCTCACATCC +
Preference number: 5 (lower is better)
Translates to: TMGSCQMFSVVYNSSKNEIGLQL*DYRLTS
Trigger: GGATGTGAGACGGTAATCCAAAAGTTGAAGACCAAT...TTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTGACAGGATCCCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGAGTACCAATCATATTATaGGTGGAGCAGAACTATGCA +
Preference number: 5 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRVPIIL*VEQNYA
Trigger: TGCATAGTTCTGCTCCACCAATAATATGATTGGTAC...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp CAAATGTTTTCGGTAGTTTATAACAGCTCCAAAAATGAAATGGACAGTGGAAGAAATATCAGCATGCTGTaGTGCATTCGATACTACAAA +
Preference number: 5 (lower is better)
Translates to: QMFSVVYNSSKNEMDSGRNISML*CIRYYK
Trigger: TTTGTAGTATCGAATGCACAACAGCATGCTGATATT...TCTTCCACTGTCCATTTCATTTTTGGAGCTGTTATAAACTACCGAAAACATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS-3UTR CAA 90 bp AAAATGCAAAGAATTATCTGCCATATCTCCCTGATACTAATTCCCTTAGCACTTACAGGCATGTTTCATTaGATTAGCACAGTGTTTGTA +
Preference number: 5 (lower is better)
Translates to: KMQRIICHISLILIPLALTGMFH*ISTVFV
Trigger: TACAAACACTGTGCTAATCAAATGAAACATGCCTGT...AAGTGCTAAGGGAATTAGTATCAGGGAGATATGGCAGATAATTCTTTGCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS TCA 72 bp GAAGGGAGGACGCGCGCCCGAGCGCGTGGACGGGGCTaGCCGGTGGGCGCGGAGATCCCTGCCTGGCCACGC +
Preference number: 6 (lower is better)
Translates to: EGRTRARARGRG*PVGAEIPAWPR
Trigger: GCGTGGCCAGGCAGGGATCTCCGCGCCCACCGGTCAGCCCCGTCCACGCGCTCGGGCGCGCGTCCTCCCTTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS GCA 72 bp GGCTGTCCCCTCCCCGTCTCCTCGCCCAGCTCGCGATaGCCAGCCAGGCGCGGCGCGCGTTTGCCCGGCACT +
Preference number: 6 (lower is better)
Translates to: GCPLPVSSPSSR*PARRGARLPGT
Trigger: AGTGCCGGGCAAACGCGCGCCGCGCCTGGCTGGGCATCGCGAGCTGGGCGAGGAGACGGGGAGGGGACAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396182.6
ENST00000396189.2
CDS CCA 72 bp GGACGCGCGCCCGAGCGCGTGGACGGGGCTGACCGGTaGGCGCGGAGATCCCTGCCTGGCCACGCTACTCTC +
Preference number: 6 (lower is better)
Translates to: GRAPERVDGADR*ARRSLPGHATL
Trigger: GAGAGTAGCGTGGCCAGGCAGGGATCTCCGCGCCCACCGGTCAGCCCCGTCCACGCGCTCGGGCGCGCGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS GCA 72 bp CCAGCTCGCGATGCCCAGCCAGGCGCGGCGCGCGTTTaGCCGGCACTTTCTCGGCGCGCTCCCCCTTCTGCG +
Preference number: 6 (lower is better)
Translates to: PARDAQPGAARV*PALSRRAPPSA
Trigger: CGCAGAAGGGGGAGCGCGCCGAGAAAGTGCCGGGCAAACGCGCGCCGCGCCTGGCTGGGCATCGCGAGCTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396182.6
ENST00000396189.2
CDS CAA 72 bp CCCAGCTCGCGATGCCCAGCCAGGCGCGGCGCGCGTTaGCCCGGCACTTTCTCGGCGCGCTCCCCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: PSSRCPARRGAR*PGTFSARSPFC
Trigger: GCAGAAGGGGGAGCGCGCCGAGAAAGTGCCGGGCAAACGCGCGCCGCGCCTGGCTGGGCATCGCGAGCTGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396182.6
ENST00000396189.2
CDS GCA 72 bp GGTGGCGCCTCAGGCTGCGGTGGCAACGAGCCCGACTaGACTACGGCTTTGCGGGACCGCGCCAGCGCGGAG +
Preference number: 6 (lower is better)
Translates to: GGASGCGGNEPD*TTALRDRASAE
Trigger: CTCCGCGCTGGCGCGGTCCCGCAAAGCCGTAGTGCAGTCGGGCTCGTTGCCACCGCAGCCTGAGGCGCCACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS CAA 72 bp GGCTGCGGTGGCAACGAGCCCGACTGCACTACGGCTTaGCGGGACCGCGCCAGCGCGGAGGAGACCGAGCCC +
Preference number: 6 (lower is better)
Translates to: GCGGNEPDCTTA*RDRASAEETEP
Trigger: GGGCTCGGTCTCCTCCGCGCTGGCGCGGTCCCGCAAAGCCGTAGTGCAGTCGGGCTCGTTGCCACCGCAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS GCA 72 bp CGCAGGGCAGCCGCGGCCACCACCGACCTGCGGAGCTaGGTGGGCTTCCGGAACCCTCACCTCAACAAGAGC +
Preference number: 6 (lower is better)
Translates to: RRAAAATTDLRS*VGFRNPHLNKS
Trigger: GCTCTTGTTGAGGTGAGGGTTCCGGAAGCCCACGCAGCTCCGCAGGTCGGTGGTGGCCGCGGCTGCCCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000495221.1
CDS CCA 72 bp GGGCAGCCGCGGCCACCACCGACCTGCGGAGCTGCGTaGGCTTCCGGAACCCTCACCTCAACAAGAGCTCGG +
Preference number: 6 (lower is better)
Translates to: GQPRPPPTCGAA*ASGTLTSTRAR
Trigger: CCGAGCTCTTGTTGAGGTGAGGGTTCCGGAAGCCCACGCAGCTCCGCAGGTCGGTGGTGGCCGCGGCTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000495221.1
CDS CCA 72 bp CGCGAATGGGTCTCCGACAGCAACGGGAGCAGCCGGTaGCGCCTCAGGCTGCGGTGGCAACGAGCCCGACTG +
Preference number: 6 (lower is better)
Translates to: REWVSDSNGSSR*RLRLRWQRARL
Trigger: CAGTCGGGCTCGTTGCCACCGCAGCCTGAGGCGCCACCGGCTGCTCCCGTTGCTGTCGGAGACCCATTCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS CCA 72 bp CCGGGGTCCCGGCCTCTGGGTTTTAGGGAGCGCGAATaGGTCTCCGACAGCAACGGGAGCAGCCGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: PGSRPLGFRERE*VSDSNGSSRWR
Trigger: GCGCCACCGGCTGCTCCCGTTGCTGTCGGAGACCCATTCGCGCTCCCTAAAACCCAGAGGCCGGGACCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS TCA 72 bp GCGCTGTCACTCTCAGCCCCGCCGCGCGCTGGCAGCTaGGCGCCTGGAGACAACAGCGGGGACCCAATGTCA +
Preference number: 6 (lower is better)
Translates to: ALSLSAPPRAGS*APGDNSGDPMS
Trigger: TGACATTGGGTCCCCGCTGTTGTCTCCAGGCGCTCAGCTGCCAGCGCGCGGCGGGGCTGAGAGTGACAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS GCA 72 bp GAGCGGACTCCGATCGCGGCAAACCATGGCCCCAGGTaGGCTCCGGAGGCAGCTGCGGGAACCAGCCATGGT +
Preference number: 6 (lower is better)
Translates to: ERTPIAANHGPR*APEAAAGTSHG
Trigger: ACCATGGCTGGTTCCCGCAGCTGCCTCCGGAGCGCACCTGGGGCCATGGTTTGCCGCGATCGGAGTCCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396182.6
ENST00000396189.2
ENST00000495221.1
CDS GCA 72 bp CCGACAGCAACGGGAGCAGCCGGTGGCGCCTCAGGCTaGGGTGGCAACGAGCCCGACTGCACTACGGCTTTG +
Preference number: 6 (lower is better)
Translates to: PTATGAAGGASG*GGNEPDCTTAL
Trigger: CAAAGCCGTAGTGCAGTCGGGCTCGTTGCCACCGCAGCCTGAGGCGCCACCGGCTGCTCCCGTTGCTGTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS CCA 72 bp AGCAACGGGAGCAGCCGGTGGCGCCTCAGGCTGCGGTaGCAACGAGCCCGACTGCACTACGGCTTTGCGGGA +
Preference number: 6 (lower is better)
Translates to: SNGSSRWRLRLR*QRARLHYGFAG
Trigger: TCCCGCAAAGCCGTAGTGCAGTCGGGCTCGTTGCCACCGCAGCCTGAGGCGCCACCGGCTGCTCCCGTTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS CCA 72 bp GCAACCGCTGCGCTGCGGCTTCGTGGCCAGCAGGGCTaGGACATACTCGCCTCACGCTTCAGCACCGGGGAC +
Preference number: 6 (lower is better)
Translates to: ATAALRLRGQQG*DILASRFSTGD
Trigger: GTCCCCGGTGCTGAAGCGTGAGGCGAGTATGTCCCAGCCCTGCTGGCCACGAAGCCGCAGCGCAGCGGTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS GCA 72 bp CGTTTGCCCGGCACTTTCTCGGCGCGCTCCCCCTTCTaGGCCCCCAGACTCCGACTTAGAGCGGACTCCGAT +
Preference number: 6 (lower is better)
Translates to: RLPGTFSARSPF*APRLRLRADSD
Trigger: ATCGGAGTCCGCTCTAAGTCGGAGTCTGGGGGCGCAGAAGGGGGAGCGCGCCGAGAAAGTGCCGGGCAAACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396182.6
ENST00000396189.2
ENST00000495221.1
CDS GCA 72 bp CTTCGGCAGCTCTTCTCGATGTCTCGCCGCGGGCTGTaGCTCACAGGCTACGGGAGGGGAGAGTGTCTCCCC +
Preference number: 6 (lower is better)
Translates to: LRQLFSMSRRGL*LTGYGRGECLP
Trigger: GGGGAGACACTCTCCCCTCCCGTAGCCTGTGAGGCACAGCCCGCGGCGAGACATCGAGAAGAGCTGCCGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS GCA 72 bp GGTCCAAGAAGTCTGCCAGCTTCCCTCCGGCTGGTCTaGTCTCCTCCAGCTAGTGGCAGGGCAGCAAGACAG +
Preference number: 6 (lower is better)
Translates to: GPRSLPASLRLV*SPPASGRAARQ
Trigger: CTGTCTTGCTGCCCTGCCACTAGCTGGAGGAGAGCAGACCAGCCGGAGGGAAGCTGGCAGACTTCTTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464881.1
CDS CCA 72 bp TCCAGCTTCATTTGCAACCGCTGCGCTGCGGCTTCGTaGCCAGCAGGGCTGGGACATACTCGCCTCACGCTT +
Preference number: 6 (lower is better)
Translates to: SSFICNRCAAAS*PAGLGHTRLTL
Trigger: AAGCGTGAGGCGAGTATGTCCCAGCCCTGCTGGCCACGAAGCCGCAGCGCAGCGGTTGCAAATGAAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672256.1
CDS CCA 72 bp CTCTGGGGGTCGAGGGTCATGGACAATTGTTGGCCTTaGCTTCTCCTTGACATTCCCTGTGAGCCCATCGAT +
Preference number: 6 (lower is better)
Translates to: LWGSRVMDNCWP*LLLDIPCEPID
Trigger: ATCGATGGGCTCACAGGGAATGTCAAGGAGAAGCCAAGGCCAACAATTGTCCATGACCCTCGACCCCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS CAA 72 bp TTGTTGATCGGGGCACTTCCCTCTGAACCAGAGGTCTaGACACCTGATCGCTTGGCATCTGACGAGCTGATG +
Preference number: 6 (lower is better)
Translates to: LLIGALPSEPEV*TPDRLASDELM
Trigger: CATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGAGGGAAGTGCCCCGATCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS CAA 90 bp GCCTCACTCTCGCACCCGCCACAGAACCGGATCCATTTTGAAATATaGAAGCGACTGATGGGGACGAAGGGAACCACACACCACACTCAA +
Preference number: 6 (lower is better)
Translates to: ASLSHPPQNRIHFEI*KRLMGTKGTTHHTQ
Trigger: TTGAGTGTGGTGTGTGGTTCCCTTCGTCCCCATCAGTCGCTTCAATATTTCAAAATGGATCCGGTTCTGTGGCGGGTGCGAGAGTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321453.12
ENST00000396189.2
CDS CAA 90 bp ATCGGGGCACTTCCCTCTGAACCAGAGGTCTTGACACCTGATCGCTaGGCATCTGACGAGCTGATGCTATTCAAACTCGAACGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: IGALPSEPEVLTPDR*ASDELMLFKLERLC
Trigger: ACAGAGGCGTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGAGGGAAGTGCCCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS TCA 72 bp CTCACTCTCGCACCCGCCACAGAACCGGATCCATTTTaGAATATTGAAGCGACTGATGGGGACGAAGGGAAC +
Preference number: 6 (lower is better)
Translates to: LTLAPATEPDPF*NIEATDGDEGN
Trigger: GTTCCCTTCGTCCCCATCAGTCGCTTCAATATTTCAAAATGGATCCGGTTCTGTGGCGGGTGCGAGAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396184.7
ENST00000396189.2
CDS CCA 72 bp TCATCAGCTAGGATCTCCTCTGGGGGTCGAGGGTCATaGACAATTGTTGGCCTTGGCTTCTCCTTGACATTC +
Preference number: 6 (lower is better)
Translates to: SSARISSGGRGS*TIVGLGFSLTF
Trigger: GAATGTCAAGGAGAAGCCAAGGCCAACAATTGTCCATGACCCTCGACCCCCAGAGGAGATCCTAGCTGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS CAA 72 bp TCGCACCCGCCACAGAACCGGATCCATTTTGAAATATaGAAGCGACTGATGGGGACGAAGGGAACCACACAC +
Preference number: 6 (lower is better)
Translates to: SHPPQNRIHFEI*KRLMGTKGTTH
Trigger: GTGTGTGGTTCCCTTCGTCCCCATCAGTCGCTTCAATATTTCAAAATGGATCCGGTTCTGTGGCGGGTGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321453.12
ENST00000396184.7
ENST00000396189.2
CDS TCA 72 bp GTGCTTGCTGTATCCCACTTCCAGGGCCTCCACAAATaGGACAAGTGCAGAAATGGGGATCTTGAAACGGCT +
Preference number: 6 (lower is better)
Translates to: VLAVSHFQGLHK*DKCRNGDLETA
Trigger: AGCCGTTTCAAGATCCCCATTTCTGCACTTGTCTCATTTGTGGAGGCCCTGGAAGTGGGATACAGCAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
ENST00000482681.5
CDS TCA 72 bp TTCTCTGTCACCCTGTCTGAAGAACTCCTCCAGGAGTaGCATTGTCCAGCGATGATGGAGGTCCCATGCTTT +
Preference number: 6 (lower is better)
Translates to: FSVTLSEELLQE*HCPAMMEVPCF
Trigger: AAAGCATGGGACCTCCATCATCGCTGGACAATGTCACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS GCA 72 bp CTCAAAGTCTTCAGCTTGCTGACAACACACCCACAGTaGTGCCTTTCTACCCTGCAGCTGGTAAGCTATTGC +
Preference number: 6 (lower is better)
Translates to: LKVFSLLTTHPQ*CLSTLQLVSYC
Trigger: GCAATAGCTTACCAGCTGCAGGGTAGAAAGGCAGCACTGTGGGTGTGTTGTCAGCAAGCTGAAGACTTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478736.1
CDS CCA 72 bp AAGCACAGGGATAGGGATAGAGATAGGGATTGGGATTaGACTCCAGCTCCAAGAGAAAGCACCTCGGGTCTA +
Preference number: 6 (lower is better)
Translates to: KHRDRDRDRDWD*TPAPRESTSGL
Trigger: TAGACCCGAGGTGCTTTCTCTTGGAGCTGGAGTCCAATCCCAATCCCTATCTCTATCCCTATCCCTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396182.6
CDS CCA 72 bp CAGAGAGTTGCTCTCAAATTCTTCAATCTCCTTGGTTaGCGACTCCATAGCTCAACAAGAGCTCGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: QRVALKFFNLLG*RLHSSTRARLR
Trigger: GCGGAGCCGAGCTCTTGTTGAGCTATGGAGTCGCCAACCAAGGAGATTGAAGAATTTGAGAGCAACTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396184.7
CDS CAA 72 bp TCCTCTTTGGGTACCTTGGCCCTCCATCTCTCCCGATaGATGTGCACCACTTCCGTCCAAGTAGCTTTAAAG +
Preference number: 6 (lower is better)
Translates to: SSLGTLALHLSR*MCTTSVQVALK
Trigger: CTTTAAAGCTACTTGGACGGAAGTGGTGCACATCAATCGGGAGAGATGGAGGGCCAAGGTACCCAAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS TCA 72 bp CTGAAGAACTCCTCCAGGAGTGACATTGTCCAGCGATaGTGGAGGTCCCATGCTTTTGCTGGATGGCTAATA +
Preference number: 6 (lower is better)
Translates to: LKNSSRSDIVQR*WRSHAFAGWLI
Trigger: TATTAGCCATCCAGCAAAAGCATGGGACCTCCATCATCGCTGGACAATGTCACTCCTGGAGGAGTTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS GCA 72 bp TTGGGTACCTTGGCCCTCCATCTCTCCCGATTGATGTaGACCACTTCCGTCCAAGTAGCTTTAAAGCTCTTA +
Preference number: 6 (lower is better)
Translates to: LGTLALHLSRLM*TTSVQVALKLL
Trigger: TAAGAGCTTTAAAGCTACTTGGACGGAAGTGGTGCACATCAATCGGGAGAGATGGAGGGCCAAGGTACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS CAA 72 bp CTTCCCTCTGAACCAGAGGTCTTGACACCTGATCGCTaGGCATCTGACGAGCTGATGCTATTCAAACTCGAA +
Preference number: 6 (lower is better)
Translates to: LPSEPEVLTPDR*ASDELMLFKLE
Trigger: TTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS CAA 90 bp ATGACAGAATTGTTGATCGGGGCACTTCCCTCTGAACCAGAGGTCTaGACACCTGATCGCTTGGCATCTGACGAGCTGATGCTATTCAAA +
Preference number: 6 (lower is better)
Translates to: MTELLIGALPSEPEV*TPDRLASDELMLFK
Trigger: TTTGAATAGCATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGAGGGAAGTGCCCCGATCAACAATTCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS CAA 72 bp GCGGAGCCGAAGCCAGATTTTCTCGATCTGTTCCGGTaGCAGGTATTTCAGAGAGTTGCTCTCAAATTCTTC +
Preference number: 6 (lower is better)
Translates to: AEPKPDFLDLFR*QVFQRVALKFF
Trigger: GAAGAATTTGAGAGCAACTCTCTGAAATACCTGCAACCGGAACAGATCGAGAAAATCTGGCTTCGGCTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396189.2
ENST00000396191.6
CDS CAA 90 bp TTGAAGTCACCATTCTGTTGCTGTTCTCCTGATGACTTCTCGGCTTaGGAGTTTTTCCCACGAGGGTTGTCACTTTTGTTTGCCCGTGTT +
Preference number: 6 (lower is better)
Translates to: LKSPFCCCSPDDFSA*EFFPRGLSLLFARV
Trigger: AACACGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCATCAGGAGAACAGCAACAGAATGGTGACTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
ENST00000479980.1
CDS CAA 90 bp CTGAACACAAGAAACAGAATCAGCACACTGAGATTAAATCTGAAGTaGGAGCTCTCTGTTCAAAGCAGCTGCTCCTCTCTGCCTCACCTG +
Preference number: 6 (lower is better)
Translates to: LNTRNRISTLRLNLK*ELSVQSSCSSLPHL
Trigger: CAGGTGAGGCAGAGAGGAGCAGCTGCTTTGAACAGAGAGCTCCAACTTCAGATTTAATCTCAGTGTGCTGATTCTGTTTCTTGTGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482681.5
CDS TCA 72 bp GCACATCAACAGATGGAAAGGCAAACCCCTCAGCCATaGGATGTTGCCGAAGTTTACTCCAAACAAGGAAGT +
Preference number: 6 (lower is better)
Translates to: AHQQMERQTPQP*DVAEVYSKQGS
Trigger: ACTTCCTTGTTTGGAGTAAACTTCGGCAACATCTCATGGCTGAGGGGTTTGCCTTTCCATCTGTTGATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS GCA 72 bp CGGAGCCGAAGCCAGATTTTCTCGATCTGTTCCGGTTaGAGGTATTTCAGAGAGTTGCTCTCAAATTCTTCA +
Preference number: 6 (lower is better)
Translates to: RSRSQIFSICSG*RYFRELLSNSS
Trigger: TGAAGAATTTGAGAGCAACTCTCTGAAATACCTGCAACCGGAACAGATCGAGAAAATCTGGCTTCGGCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396189.2
ENST00000396191.6
CDS CAA 90 bp AGCCAGATTTTCTCGATCTGTTCCGGTTGCAGGTATTTCAGAGAGTaGCTCTCAAATTCTTCAATCTCCTTGGTTGGCGACTCCATAGCA +
Preference number: 6 (lower is better)
Translates to: SQIFSICSGCRYFRE*LSNSSISLVGDSIA
Trigger: TGCTATGGAGTCGCCAACCAAGGAGATTGAAGAATTTGAGAGCAACTCTCTGAAATACCTGCAACCGGAACAGATCGAGAAAATCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321453.12
CDS CAA 90 bp AGCCAGATTTTCTCGATCTGTTCCGGTTGCAGGTATTTCAGAGAGTaGCTCTCAAATTCTTCAATCTCCTTGGTTGGCGACTCCATAGCT +
Preference number: 6 (lower is better)
Translates to: SQIFSICSGCRYFRE*LSNSSISLVGDSIA
Trigger: AGCTATGGAGTCGCCAACCAAGGAGATTGAAGAATTTGAGAGCAACTCTCTGAAATACCTGCAACCGGAACAGATCGAGAAAATCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396182.6
ENST00000396184.7
ENST00000396189.2
ENST00000396191.6
CDS CCA 72 bp CATTCTGTTGCTGTTCTCCTGATGACTTCTCGGCTTTaGAGTTTTTCCCACGAGGGTTGTCACTTTTGTTTG +
Preference number: 6 (lower is better)
Translates to: HSVAVLLMTSRL*SFSHEGCHFCL
Trigger: CAAACAAAAGTGACAACCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCATCAGGAGAACAGCAACAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
ENST00000479980.1
CDS CAA 72 bp TTCTGGCTGCTGCAGAGCAGTCTTCATTGCTTTGATTaGTTGGAAGTGACAAGACATATCTGTGGCCATCAC +
Preference number: 6 (lower is better)
Translates to: FWLLQSSLHCFD*LEVTRHICGHH
Trigger: GTGATGGCCACAGATATGTCTTGTCACTTCCAACAAATCAAAGCAATGAAGACTGCTCTGCAGCAGCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS CAA 72 bp CCATTCTGTTGCTGTTCTCCTGATGACTTCTCGGCTTaGGAGTTTTTCCCACGAGGGTTGTCACTTTTGTTT +
Preference number: 6 (lower is better)
Translates to: PFCCCSPDDFSA*EFFPRGLSLLF
Trigger: AAACAAAAGTGACAACCCTCGTGGGAAAAACTCCAAAGCCGAGAAGTCATCAGGAGAACAGCAACAGAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
ENST00000479980.1
CDS CAA 90 bp TTTCCCACGAGGGTTGTCACTTTTGTTTGCCCGTGTTCCATTGACTaGATTCTTAGTTTCTCCAGACGTCTTTTTCTCAGCTTTGCCAGA +
Preference number: 6 (lower is better)
Translates to: FPTRVVTFVCPCSID*ILSFSRRLFLSFAR
Trigger: TCTGGCAAAGCTGAGAAAAAGACGTCTGGAGAAACTAAGAATCAAGTCAATGGAACACGGGCAAACAAAAGTGACAACCCTCGTGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
ENST00000479980.1
CDS GCA 72 bp GATAAGGCTTTTGGCTTTTCAATGGCTTCTGGCTGCTaGAGAGCAGTCTTCATTGCTTTGATTTGTTGGAAG +
Preference number: 6 (lower is better)
Translates to: DKAFGFSMASGC*RAVFIALICWK
Trigger: CTTCCAACAAATCAAAGCAATGAAGACTGCTCTGCAGCAGCCAGAAGCCATTGAAAAGCCAAAAGCCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
ENST00000396193.5
CDS CAA 72 bp AGATCTACCACTGAAGCTTCCCCTCTCTCTAATTGTTaGACCAAAGACCGTAATCTGAAGGATGTCTTCACC +
Preference number: 6 (lower is better)
Translates to: RSTTEASPLSNC*TKDRNLKDVFT
Trigger: GGTGAAGACATCCTTCAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396193.5
CDS CAA 72 bp AGAAACAGAATCAGCACACTGAGATTAAATCTGAAGTaGGAGCTCTCTGTTCAAAGCAGCTGCTCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: RNRISTLRLNLK*ELSVQSSCSSL
Trigger: CAGAGAGGAGCAGCTGCTTTGAACAGAGAGCTCCAACTTCAGATTTAATCTCAGTGTGCTGATTCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482681.5
CDS CAA 90 bp AACACACCCACAGTGCTGCCTTTCTACCCTGCAGCTGGTAAGCTATaGCCAAACACAAGTTTTCTGAGAGACAGAAATAAGTTATTTTCC +
Preference number: 6 (lower is better)
Translates to: NTPTVLPFYPAAGKL*PNTSFLRDRNKLFS
Trigger: GGAAAATAACTTATTTCTGTCTCTCAGAAAACTTGTGTTTGGCAATAGCTTACCAGCTGCAGGGTAGAAAGGCAGCACTGTGGGTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478736.1
CDS TCA 72 bp GATCTACCACTGAAGCTTCCCCTCTCTCTAATTGTTTaGCCAAAGACCGTAATCTCTGGGACGTTTTCTTAT +
Preference number: 6 (lower is better)
Translates to: DLPLKLPLSLIV*PKTVISGTFSY
Trigger: ATAAGAAAACGTCCCAGAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
CDS TCA 72 bp GATCTACCACTGAAGCTTCCCCTCTCTCTAATTGTTTaGCCAAAGACCGTAATCTCCAGTTTAGAAATGAGG +
Preference number: 6 (lower is better)
Translates to: DLPLKLPLSLIV*PKTVISSLEMR
Trigger: CCTCATTTCTAAACTGGAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464881.1
CDS CAA 72 bp AGATCTACCACTGAAGCTTCCCCTCTCTCTAATTGTTaGACCAAAGACCGTAATCTCTGGGACGTTTTCTTA +
Preference number: 6 (lower is better)
Translates to: RSTTEASPLSNC*TKDRNLWDVFL
Trigger: TAAGAAAACGTCCCAGAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321453.12
ENST00000396182.6
ENST00000396184.7
ENST00000396191.6
CDS CAA 72 bp AGATCTACCACTGAAGCTTCCCCTCTCTCTAATTGTTaGACCAAAGACCGTAATCTCCAGTTTAGAAATGAG +
Preference number: 6 (lower is better)
Translates to: RSTTEASPLSNC*TKDRNLQFRNE
Trigger: CTCATTTCTAAACTGGAGATTACGGTCTTTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464881.1