RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE1A (Homo sapiens)

Ensembl gene IDs: ENSG00000115252

Ensembl transcript IDs: ENST00000351439.9, ENST00000358139.6, ENST00000409365.5, ENST00000410103.1, ENST00000435564.5, ENST00000482538.5, ENST00000482782.5, ENST00000495511.1

Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATGTGACTTGCTTGTAACCACAACCATGGAGGTAATGCATTCGTaGTTTGAAACCATGGGGACGGACGCAGGCTGGTCCACGGGTTCA +
Preference number: 1 (lower is better)
Translates to: ACDLLVTTTMEVMHS*FETMGTDAGWSTGS
Trigger: TGAACCCGTGGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCATGGTTGTGGTTACAAGCAAGTCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR CCA 90 bp GAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTaGTCCACGGGTTCAGAAAAAGGTTTCACTGCCATTTCCCAGTAT +
Preference number: 1 (lower is better)
Translates to: EVMHSCFETMGTDAG*STGSEKGFTAISQY
Trigger: ATACTGGGAAATGGCAGTGAAACCTTTTTCTGAACCCGTGGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR TCA 90 bp CTGGTCCACGGGTTCAGAAAAAGGTTTCACTGCCATTTCCCAGTATaGGAGTTTACAAAGGTGTTCATCAGGTCACCTAGCTGGGGATCT +
Preference number: 1 (lower is better)
Translates to: LVHGFRKRFHCHFPV*EFTKVFIRSPSWGS
Trigger: AGATCCCCAGCTAGGTGACCTGATGAACACCTTTGTAAACTCTCATACTGGGAAATGGCAGTGAAACCTTTTTCTGAACCCGTGGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR TCA 90 bp ATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTaGGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGG +
Preference number: 1 (lower is better)
Translates to: IKEFTAVIYVAHDAY*AICKNRFPVSHRTG
Trigger: CCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
3UTR TCA 90 bp AAAATTTATTGGCACTCGGTAAAGACAAATGCCACAAAATGCCATTaGAACAGATATCTGAAAGCACAAGGTGCTGATGTAGCCACTAGA +
Preference number: 1 (lower is better)
Translates to: KIYWHSVKTNATKCH*NRYLKAQGADVATR
Trigger: TCTAGTGGCTACATCAGCACCTTGTGCTTTCAGATATCTGTTTCAATGGCATTTTGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
3UTR CCA 90 bp AATGGCCCAATCCAATTCTATGTTGAAAGAAGAGCCATAGCTTTGTaGAAAGTTGAGAATTTAGGATGTTTTCATGCTGATTTCATTGTC +
Preference number: 1 (lower is better)
Translates to: NGPIQFYVERRAIAL*KVENLGCFHADFIV
Trigger: GACAATGAAATCAGCATGAAAACATCCTAAATTCTCAACTTTCCACAAAGCTATGGCTCTTCTTTCAACATAGAATTGGATTGGGCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR CAA 90 bp AAGGTGTTCATCAGGTCACCTAGCTGGGGATCTAATGCTCCATTGTaGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: KVFIRSPSWGSNAPL*DCSIALMLQPAPQH
Trigger: ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGCATTAGATCCCCAGCTAGGTGACCTGATGAACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR CAA 90 bp ACAAAGGTGTTCATCAGGTCACCTAGCTGGGGATCTAATGCTCCATaGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: TKVFIRSPSWGSNAP*LDCSIALMLQPAPQ
Trigger: CTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGCATTAGATCCCCAGCTAGGTGACCTGATGAACACCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR CCA 90 bp TTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAACGTGCTTTGAAACCATaGGGACGGACGCAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: LLSLEVWSQCFISRITWKRALKP*GRTQAG
Trigger: ACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACG...TTTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR GCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATCTTCTGCACATGTATTaGACAGTCATTATGACAGGG +
Preference number: 2 (lower is better)
Translates to: APLLDCSIALMLQPAPQHLLHMY*TVIMTG
Trigger: CCCTGTCATAATGACTGTGCAATACATGTGCAGAAG...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR TCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATATTGCACAGTCATTATaGCAGGGTTCAAAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: APLLDCSIALMLQPAPQHIAQSL*QGSKQE
Trigger: TTCTTGCTTTGAACCCTGTCATAATGACTGTGCAAT...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR GCA 90 bp CAAAGCAGGACATTCACGGTGCAACAGCCTAACCTATCAATCCCTCTCTTCAGAGCAAAGGAAAGACTTTaGACATGCTCAGGCAAAACA +
Preference number: 2 (lower is better)
Translates to: QSRTFTVQQPNLSIPLFRAKERL*TCSGKT
Trigger: TGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGC...TCTGAAGAGAGGGATTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR TCA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACACTGTAGCATTGCTCTaGTGCTTCAACCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNTVALL*CFNQLL
Trigger: GAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGT...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR TCA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACAAATGCATTCGTGCTTTaGAACCATGGGGACGGACGC +
Preference number: 2 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTNAFVL*NHGDGR
Trigger: GCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATT...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR GCA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGCAGGACATTCACGGTaGAACAGCCTAACCTATCAA +
Preference number: 2 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYAGHSR*NSLTYQ
Trigger: TTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGC...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR CCA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATATCAGGTCACCTAGCTaGGGATCTAATGCTCCATTG +
Preference number: 2 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYIRSPS*GSNAPL
Trigger: CAATGGAGCATTAGATCCCCAGCTAGGTGACCTGAT...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR GCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAGAGGTAATGCATTCGTaGTTTGAAACCATGGGGACG +
Preference number: 2 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLEEVMHS*FETMGT
Trigger: CGTCCCCATGGTTTCAAAGCACGAATGCATTACCTC...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR TCA 90 bp TTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAAGTCTCCAGCAATGGTTaGCGGTCTTGTTATCATGAA +
Preference number: 2 (lower is better)
Translates to: LLSLEVWSQCFISRITWKVSSNG*RSCYHE
Trigger: TTCATGATAACAAGACCGTCAACCATTGCTGGAGAC...TTTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR GCA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTTAGAGCTGCCACCATaGACGAGGTTTTACTTAAAG +
Preference number: 2 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMLELPP*TRFYLK
Trigger: CTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAA...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
3UTR-3UTR GCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTTTAGAGCTGCCACCATaGACGAGGTTTTACTTAAAG +
Preference number: 2 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLLELPP*TRFYLK
Trigger: CTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAA...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
3UTR-3UTR CCA 90 bp CAAAGCAGGACATTCACGGTGCAACAGCCTAACCTATCAATCCCTCTCTTCAGATTGAGTGTATTTATTTaGCCAGAGTTACTAGCTCAA +
Preference number: 2 (lower is better)
Translates to: QSRTFTVQQPNLSIPLFRLSVFI*PELLAQ
Trigger: TTGAGCTAGTAACTCTGGCCAAATAAATACACTCAA...TCTGAAGAGAGGGATTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR TCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACAGATGTAGCCACTAGATaGATCTGTTCGGTAGCAGTT +
Preference number: 2 (lower is better)
Translates to: AISCSKKIYWHSVKTNATDVATR*ICSVAV
Trigger: AACTGCTACCGAACAGATTCATCTAGTGGCTACATC...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
3UTR-3UTR TCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGTTTATCTGGCTTGATTaGAGAAGGCCAAATTGTGGA +
Preference number: 2 (lower is better)
Translates to: LPYAYMHHASSQELMNNRFIWLD*RRPNCG
Trigger: TCCACAATTTGGCCTTCTTCAATCAAGCCAGATAAA...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR TCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAATGCCATTTCCCAGTATaGGAGTTTACAAAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLECHFPV*EFTKVF
Trigger: GAACACCTTTGTAAACTCTCATACTGGGAAATGGCA...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR TCA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGGATCCTCCTTTGCATaGTTTAATTTATGGCTACTC +
Preference number: 2 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYGSSFA*FNLWLL
Trigger: GAGTAGCCATAAATTAAATCATGCAAAGGAGGATCC...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR GCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGGAAAACTTGTTAGGATaGATGGATCCTCCTTTGCAT +
Preference number: 2 (lower is better)
Translates to: LPYAYMHHASSQELMNNRENLLG*MDPPLH
Trigger: ATGCAAAGGAGGATCCATGCATCCTAACAAGTTTTC...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR GCA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAAGTTTGGTCACAGTaGTTTATAAGTCGCATAACC +
Preference number: 2 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYEVWSQ*FISRIT
Trigger: GGTTATGCGACTTATAAAGCACTGTGACCAAACTTC...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR CCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGCTGTCTCTGGAAGTTTaGTCACAGTGCTTTATAAGT +
Preference number: 2 (lower is better)
Translates to: LPYAYMHHASSQELMNNRLSLEV*SQCFIS
Trigger: ACTTATAAAGCACTGTGACCAAACTTCCAGAGACAG...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR GCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACATTAGAGCTGCCACCATaGACGAGGTTTTACTTAAAG +
Preference number: 2 (lower is better)
Translates to: AISCSKKIYWHSVKTNATLELPP*TRFYLK
Trigger: CTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAA...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
3UTR-3UTR CCA 90 bp TCTTCAGATGGCCTCAACAGTAATGTTTGCAGAAAGACATGCACAGATAACCTCAAATGGCAGAAGCACTaGCCAAAAACTCTGATAAAA +
Preference number: 2 (lower is better)
Translates to: SSDGLNSNVCRKTCTDNLKWQKH*PKTLIK
Trigger: TTTTATCAGAGTTTTTGGCCAGTGCTTCTGCCATTT...GAGGTTATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAGGCCATCTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR TCA 90 bp TTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAAACATCTAATTGTGCTTaGTCTTTCTTGTCAGCTAAC +
Preference number: 2 (lower is better)
Translates to: LLSLEVWSQCFISRITWKTSNCA*SFLSAN
Trigger: GTTAGCTGACAAGAAAGATCAAGCACAATTAGATGT...TTTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR CCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTGTCTGTCTCCAGCAATaGTTGACGGTCTTGTTATCA +
Preference number: 2 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSVCLQQ*LTVLLS
Trigger: TGATAACAAGACCGTCAACCATTGCTGGAGACAGAC...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR GCA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACAAAATACCTCATCTTCTaGACATGTATTGCACAGTCA +
Preference number: 2 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTKYLIF*TCIAQS
Trigger: TGACTGTGCAATACATGTGCAGAAGATGAGGTATTT...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR TCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTTATTTTGTTACATTCTaGTGGGATAAACATCCCGCT +
Preference number: 2 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSYFVTF*WDKHPA
Trigger: AGCGGGATGTTTATCCCATCAGAATGTAACAAAATA...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR TCA 72 bp TGTAACCACAACCATGGAGGTAATGCATTCGTGCTTTaGAACCATGGGGACGGACGCAGGCTGGTCCACGGG +
Preference number: 3 (lower is better)
Translates to: CNHNHGGNAFVL*NHGDGRRLVHG
Trigger: CCCGTGGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCATGGTTGTGGTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR GCA 72 bp TTGCTTGTAACCACAACCATGGAGGTAATGCATTCGTaGTTTGAAACCATGGGGACGGACGCAGGCTGGTCC +
Preference number: 3 (lower is better)
Translates to: LLVTTTMEVMHS*FETMGTDAGWS
Trigger: GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCATGGTTGTGGTTACAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR CCA 72 bp CATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTaGTCCACGGGTTCAGAAAAAGGTTTCACTGCCATT +
Preference number: 3 (lower is better)
Translates to: HSCFETMGTDAG*STGSEKGFTAI
Trigger: AATGGCAGTGAAACCTTTTTCTGAACCCGTGGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR TCA 72 bp GGGTTCAGAAAAAGGTTTCACTGCCATTTCCCAGTATaGGAGTTTACAAAGGTGTTCATCAGGTCACCTAGC +
Preference number: 3 (lower is better)
Translates to: GFRKRFHCHFPV*EFTKVFIRSPS
Trigger: GCTAGGTGACCTGATGAACACCTTTGTAAACTCTCATACTGGGAAATGGCAGTGAAACCTTTTTCTGAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR CAA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAACACACACACACATTCTaGTCTCTTATCTCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLEHTHTF*SLISWL
Trigger: CAGCCAAGAGATAAGAGACAAGAATGTGTGTGTGTG...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR CAA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATAGAAGAGCCATAGCTTaGTGGAAAGTTGAGAATTTA +
Preference number: 3 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYRRAIA*WKVENL
Trigger: TAAATTCTCAACTTTCCACAAAGCTATGGCTCTTCT...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR CAA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACATCTTCTGCACATGTATaGCACAGTCATTATGACAGG +
Preference number: 3 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTSSAHV*HSHYDR
Trigger: CCTGTCATAATGACTGTGCAATACATGTGCAGAAGA...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR CAA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACTCTGAGGGCTGCAGTTaGTTTCTGTGTAGTAAAATA +
Preference number: 3 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNSEGCS*FLCSKI
Trigger: TATTTTACTACACAGAAACAAACTGCAGCCCTCAGA...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR GCA 72 bp TCAGATGGCCTCAACAGTAATGTTTGCAGAAAGACATaGACAGATAACCTCCACTCTGACTTTCTACTAATT +
Preference number: 3 (lower is better)
Translates to: SDGLNSNVCRKT*TDNLHSDFLLI
Trigger: AATTAGTAGAAAGTCAGAGTGGAGGTTATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAGGCCATCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR-3UTR CAA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACACTTGAGTGTATTTATTaGGCCAGAGTTACTAGCTCA +
Preference number: 3 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTLECIY*ARVTSS
Trigger: TGAGCTAGTAACTCTGGCCAAATAAATACACTCAAG...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
3UTR TCA 72 bp TTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTaGGCAATCTGCAAAAATAGATTTCCTGTCTCACAC +
Preference number: 3 (lower is better)
Translates to: FTAVIYVAHDAY*AICKNRFPVSH
Trigger: GTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
3UTR CCA 72 bp ATCCAATTCTATGTTGAAAGAAGAGCCATAGCTTTGTaGAAAGTTGAGAATTTAGGATGTTTTCATGCTGAT +
Preference number: 3 (lower is better)
Translates to: IQFYVERRAIAL*KVENLGCFHAD
Trigger: ATCAGCATGAAAACATCCTAAATTCTCAACTTTCCACAAAGCTATGGCTCTTCTTTCAACATAGAATTGGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCTGTGTAACCCCACAATaGTGGTTGAGCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSCVTPQ*WLSCLP
Trigger: TGGCAAGCAGCTCAACCACCATTGTGGGGTTACACA...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCTGCAAGGGAGTAGTCTaGGGAATAGGACCCATCACT +
Preference number: 4 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSCKGVV*GIGPIT
Trigger: AGTGATGGGTCCTATTCCCCAGACTACTCCCTTGCA...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCAGAAGTTTCGGCTTTTaGGGCTTCCTCTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSRSFGF*GFLYKR
Trigger: CCTCTTATAGAGGAAGCCTCAAAAGCCGAAACTTCT...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp CAAAGCAGGACATTCACGGTGCAACAGCCTAACCTATCAATCCCTCTCTTCAGATGGGTGGCTGATGTCTaGTGCGTGGAGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: QSRTFTVQQPNLSIPLFRWVADV*CVENQG
Trigger: TCCCTGATTCTCCACGCAGCAGACATCAGCCACCCA...TCTGAAGAGAGGGATTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp CAAAGCAGGACATTCACGGTGCAACAGCCTAACCTATCAATCCCTCTCTTCAGACTTCAGGTCCACTGCTaGAAGGGAGTAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QSRTFTVQQPNLSIPLFRLQVHC*KGVVWG
Trigger: TCCCCAGACTACTCCCTTGCAGCAGTGGACCTGAAG...TCTGAAGAGAGGGATTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCTGCATATATGCACCATaGTTCCAGCCAGGAGCTTAT +
Preference number: 4 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSCIYAP*FQPGAY
Trigger: ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCA...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCTATTGCTTAACATTGTaGAGCCCAGGAAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSYCLTL*SPGRKQ
Trigger: CTGCTTCCTTCCTGGGCTCCACAATGTTAAGCAATA...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATCCACCAGGTTGTTCTTaGAACTCTTCAGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: APLLDCSIALMLQPAPQHPPGCS*NSSGPL
Trigger: CAGTGGACCTGAAGAGTTTCAAGAACAACCTGGTGG...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp CAAAGCAGGACATTCACGGTGCAACAGCCTAACCTATCAATCCCTCTCTTCAGAACTCTTCAGGTCCACTaGTGCAAGGGAGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: QSRTFTVQQPNLSIPLFRTLQVH*CKGVVW
Trigger: CCAGACTACTCCCTTGCAGCAGTGGACCTGAAGAGT...TCTGAAGAGAGGGATTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp CAAAGCAGGACATTCACGGTGCAACAGCCTAACCTATCAATCCCTCTCTTCAGACCTCCATTAGGGCCATaGTCCACCGATAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: QSRTFTVQQPNLSIPLFRPPLGP*STDNAA
Trigger: AGCTGCATTATCGGTGGACCATGGCCCTAATGGAGG...TCTGAAGAGAGGGATTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCAGGACCCATCACTCATaGAGCCTTTTGTATTTGATC +
Preference number: 4 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSRTHHS*SLLYLI
Trigger: GATCAAATACAAAAGGCTCCATGAGTGATGGGTCCT...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCTTAATTTGCTGGAAGTaGCCTGACATGTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSLICWK*PDMSVD
Trigger: ATCTACAGACATGTCAGGTCACTTCCAGCAAATTAA...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCGGATCCTCCTTTGCATaGTTTAATTTATGGCTACTC +
Preference number: 4 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSGSSFA*FNLWLL
Trigger: GAGTAGCCATAAATTAAATCATGCAAAGGAGGATCC...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCCTTCAGGTCCACTGCTaGAAGGGAGTAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASLQVHC*KGVVWG
Trigger: TCCCCAGACTACTCCCTTGCAGCAGTGGACCTGAAG...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATTCAGGGACATGGTTTTaGCTCTGTCAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: APLLDCSIALMLQPAPQHSGTWF*LCQSLQ
Trigger: CTGAAGGGATTGACAGAGCCAAAACCATGTCCCTGA...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGCAGGATTTGGCTGGGTaGCTGATGTCTGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMQDLAG*LMSAAW
Trigger: CCACGCAGCAGACATCAGCCACCCAGCCAAATCCTG...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTCAGGATTTGGCTGGGTaGCTGATGTCTGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLQDLAG*LMSAAW
Trigger: CCACGCAGCAGACATCAGCCACCCAGCCAAATCCTG...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTATAAGACAGGCACGTTaGGGCACTCCCCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLIRQAR*GTPPQS
Trigger: GCTCTGTGGGGGAGTGCCCCAACGTGCCTGTCTTAT...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351439.9
3UTR CAA 72 bp ATCAGGTCACCTAGCTGGGGATCTAATGCTCCATTGTaGGACTGTAGCATTGCTCTGATGCTTCAACCAGCT +
Preference number: 4 (lower is better)
Translates to: IRSPSWGSNAPL*DCSIALMLQPA
Trigger: AGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGCATTAGATCCCCAGCTAGGTGACCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGCTGGGCCACCATGGTTaGCTTCCGATCACAAAGTGG +
Preference number: 4 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMLGHHG*LPITKW
Trigger: CCACTTTGTGATCGGAAGTCAACCATGGTGGCCCAG...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTCTGGGCCACCATGGTTaGCTTCCGATCACAAAGTGG +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLLGHHG*LPITKW
Trigger: CCACTTTGTGATCGGAAGTCAACCATGGTGGCCCAG...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATGTCTCCAGCAATGGTTaGCGGTCTTGTTATCATGAA +
Preference number: 4 (lower is better)
Translates to: APLLDCSIALMLQPAPQHVSSNG*RSCYHE
Trigger: TTCATGATAACAAGACCGTCAACCATTGCTGGAGAC...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCTATTTTGTTACATTCTaGTGGGATAAACATCCCGCT +
Preference number: 4 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSYFVTF*WDKHPA
Trigger: AGCGGGATGTTTATCCCATCAGAATGTAACAAAATA...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCGTGGCTGATGTCTGCTaGGTGGAGAATCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASVADVC*VENQGH
Trigger: ATGTCCCTGATTCTCCACGCAGCAGACATCAGCCAC...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGTGGGTGGCTGATGTCTaGTGCGTGGAGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVWVADV*CVENQG
Trigger: TCCCTGATTCTCCACGCAGCAGACATCAGCCACCCA...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTCTTCAGGTCCACTGCTaGAAGGGAGTAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLLQVHC*KGVVWG
Trigger: TCCCCAGACTACTCCCTTGCAGCAGTGGACCTGAAG...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTCTTCAGGTCCACTGCTaGAAGGGAGTAGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: IKISKSFGQIRAATMHEVLQVHC*KGVVWG
Trigger: TCCCCAGACTACTCCCTTGCAGCAGTGGACCTGAAG...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp CAAAGCAGGACATTCACGGTGCAACAGCCTAACCTATCAATCCCTCTCTTCAGAGAGGTAATGCATTCGTaGTTTGAAACCATGGGGACG +
Preference number: 4 (lower is better)
Translates to: QSRTFTVQQPNLSIPLFREVMHS*FETMGT
Trigger: CGTCCCCATGGTTTCAAAGCACGAATGCATTACCTC...TCTGAAGAGAGGGATTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAGGGACGGACGCAGGCTaGTCCACGGGTTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLEGTDAG*STGSEK
Trigger: TTTTTCTGAACCCGTGGACCAGCCTGCGTCCGTCCC...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCGGGACTGAGTCAGTCTaGATGTCACTGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASGTESV*MSLSSS
Trigger: AGATGAGCTCAGTGACATTCAGACTGACTCAGTCCC...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATAATGCACAGTTTGAGTaGCATCAGCTGCATGAATCA +
Preference number: 4 (lower is better)
Translates to: APLLDCSIALMLQPAPQHNAQFE*HQLHES
Trigger: TGATTCATGCAGCTGATGTCACTCAAACTGTGCATT...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATTGCCATTTCCCAGTATaGGAGTTTACAAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: APLLDCSIALMLQPAPQHCHFPV*EFTKVF
Trigger: GAACACCTTTGTAAACTCTCATACTGGGAAATGGCA...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATTGCTCAGGCAAAACATaGCAAGGAAGCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYCSGKT*QGSRAS
Trigger: AGAGGCCCTGCTTCCTTGTCATGTTTTGCCTGAGCA...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACTGGGTGGCTGATGTCTaGTGCGTGGAGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHWVADV*CVENQG
Trigger: TCCCTGATTCTCCACGCAGCAGACATCAGCCACCCA...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGACTCTTCAGGTCCACTaGTGCAAGGGAGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVTLQVH*CKGVVW
Trigger: CCAGACTACTCCCTTGCAGCAGTGGACCTGAAGAGT...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTACTCTTCAGGTCCACTaGTGCAAGGGAGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLTLQVH*CKGVVW
Trigger: CCAGACTACTCCCTTGCAGCAGTGGACCTGAAGAGT...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAGCTCTCCTTCCACATaGTGGTCAAGCTCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLSSPST*WSSSER
Trigger: CCTTTCGGAGCTTGACCAGCATGTGGAAGGAGAGCT...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR GCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAATCCAGGCAAGAGAAGTaGACGGGACCCTCCGAAACA +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKSRQEK*TGPSET
Trigger: TGTTTCGGAGGGTCCCGTGCACTTCTCTTGCCTGGA...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR CCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCAGGATTTGGCTGGGTaGCTGATGTCTGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFQDLAG*LMSAAW
Trigger: CCACGCAGCAGACATCAGCCACCCAGCCAAATCCTG...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTCCTCCATTAGGGCCATaGTCCACCGATAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: IKISKSFGQIRAATMHEVPPLGP*STDNAA
Trigger: AGCTGCATTATCGGTGGACCATGGCCCTAATGGAGG...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCTGTGTAACCCCACAATaGTGGTTGAGCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASCVTPQ*WLSCLP
Trigger: TGGCAAGCAGCTCAACCACCATTGTGGGGTTACACA...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACACGTGCTTTGAAACCATaGGGACGGACGCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTRALKP*GRTQAG
Trigger: ACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACG...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTGGGACTGAGTCAGTCTaGATGTCACTGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLGTESV*MSLSSS
Trigger: AGATGAGCTCAGTGACATTCAGACTGACTCAGTCCC...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATCAAAATGGCAACATCTaGCCTTGTCTGAATGTGAAA +
Preference number: 4 (lower is better)
Translates to: APLLDCSIALMLQPAPQHQNGNI*PCLNVK
Trigger: TTTCACATTCAGACAAGGTCAGATGTTGCCATTTTG...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACACTGGGCCACCATGGTTaGCTTCCGATCACAAAGTGG +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATLGHHG*LPITKW
Trigger: CCACTTTGTGATCGGAAGTCAACCATGGTGGCCCAG...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
CDS-3UTR TCA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACACTGGGCCACCATGGTTaGCTTCCGATCACAAAGTGG +
Preference number: 4 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTLGHHG*LPITKW
Trigger: CCACTTTGTGATCGGAAGTCAACCATGGTGGCCCAG...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTCCACCAGGTTGTTCTTaGAACTCTTCAGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: IKISKSFGQIRAATMHEVPPGCS*NSSGPL
Trigger: CAGTGGACCTGAAGAGTTTCAAGAACAACCTGGTGG...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTCCACCAGGTTGTTCTTaGAACTCTTCAGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFPPGCS*NSSGPL
Trigger: CAGTGGACCTGAAGAGTTTCAAGAACAACCTGGTGG...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCCTCTCTTTGTTCTGCTaGATGATGTCCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASLSLFC*MMSTRL
Trigger: CAACCTGGTGGACATCATTCAGCAGAACAAAGAGAG...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATACTGTAGCATTGCTCTaGTGCTTCAACCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYTVALL*CFNQLL
Trigger: GAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGT...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAAGTGGCTGATGTCTGCTaGGTGGAGAATCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKVADVC*VENQGH
Trigger: ATGTCCCTGATTCTCCACGCAGCAGACATCAGCCAC...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAGTGGCTGATGTCTGCTaGGTGGAGAATCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLEVADVC*VENQGH
Trigger: ATGTCCCTGATTCTCCACGCAGCAGACATCAGCCAC...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACAACTTCCCTGTTCTCTaGCAGCTGAGCAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHNFPVL*QLSSVS
Trigger: GGACACACTGCTCAGCTGGCAGAGAACAGGGAAGTT...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR GCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATTGCTTCCAGCACAGATaGCGCATATTCAATATTCTT +
Preference number: 4 (lower is better)
Translates to: APLLDCSIALMLQPAPQHCFQHR*RIFNIL
Trigger: AAGAATATTGAATATGCGGCATCTGTGCTGGAAGCA...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGAGGGCCTCTGAGGGCTaGAGTTTGTTTCTGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LPYAYMHHASSQELMNNRRASEG*SLFLCS
Trigger: ACTACACAGAAACAAACTGCAGCCCTCAGAGGCCCT...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTCTGATGTCTGCTGCGTaGAGAATCAGGGACATGGTT +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLLMSAA*RIRDMV
Trigger: AACCATGTCCCTGATTCTCCACGCAGCAGACATCAG...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTCTGATGTCTGCTGCGTaGAGAATCAGGGACATGGTT +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLLMSAA*RIRDMV
Trigger: AACCATGTCCCTGATTCTCCACGCAGCAGACATCAG...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TCTTCAGATGGCCTCAACAGTAATGTTTGCAGAAAGACATGCACAGATAACCTCCTGATGTCTGCTGCGTaGAGAATCAGGGACATGGTT +
Preference number: 4 (lower is better)
Translates to: SSDGLNSNVCRKTCTDNLLMSAA*RIRDMV
Trigger: AACCATGTCCCTGATTCTCCACGCAGCAGACATCAG...GAGGTTATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAGGCCATCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACCCTCCATTAGGGCCATaGTCCACCGATAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHPPLGP*STDNAA
Trigger: AGCTGCATTATCGGTGGACCATGGCCCTAATGGAGG...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTGTGACTGGGCCACCATaGTTGACTTCCGATCACAAA +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLVTGPP*LTSDHK
Trigger: TTTGTGATCGGAAGTCAACCATGGTGGCCCAGTCAC...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTGTGACTGGGCCACCATaGTTGACTTCCGATCACAAA +
Preference number: 4 (lower is better)
Translates to: IKISKSFGQIRAATMHEVVTGPP*LTSDHK
Trigger: TTTGTGATCGGAAGTCAACCATGGTGGCCCAGTCAC...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGGTAACCCCACAATGGTaGTTGAGCTGCTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVVTPQW*LSCLPH
Trigger: ATGTGGCAAGCAGCTCAACCACCATTGTGGGGTTAC...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTTGTGTAACCCCACAATaGTGGTTGAGCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLCVTPQ*WLSCLP
Trigger: TGGCAAGCAGCTCAACCACCATTGTGGGGTTACACA...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTTGCAAGGGAGTAGTCTaGGGAATAGGACCCATCACT +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLCKGVV*GIGPIT
Trigger: AGTGATGGGTCCTATTCCCCAGACTACTCCCTTGCA...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCCCTTTAATGTTACGATaGCAGCTGCTGGATATGCCA +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASPLMLR*QLLDMP
Trigger: TGGCATATCCAGCAGCTGTCATCGTAACATTAAAGG...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTCTCTCTTTGTTCTGCTaGATGATGTCCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLLSLFC*MMSTRL
Trigger: CAACCTGGTGGACATCATTCAGCAGAACAAAGAGAG...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCGATGTAGCCACTAGATaGATCTGTTCGGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASDVATR*ICSVAV
Trigger: AACTGCTACCGAACAGATTCATCTAGTGGCTACATC...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTAAGTTATTGCAGCCATaGGAGCTCTCCTTCCACATG +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFKLLQP*ELSFHM
Trigger: CATGTGGAAGGAGAGCTCTCATGGCTGCAATAACTT...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR GCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCTGTTACGATGACAGCTaGTGGATATGCCAAACCAAC +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASCYDDS*WICQTN
Trigger: GTTGGTTTGGCATATCCAGCAGCTGTCATCGTAACA...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCCATAAGTCGATAAGCTaGACTCACGTGGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASHKSIS*THVVIL
Trigger: GAGAATCACCACGTGAGTGCAGCTTATCGACTTATG...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTGTGGCTGATGTCTGCTaGGTGGAGAATCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFVADVC*VENQGH
Trigger: ATGTCCCTGATTCTCCACGCAGCAGACATCAGCCAC...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGTGGGTGGCTGATGTCTaGTGCGTGGAGAATCAGGGA +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEWVADV*CVENQG
Trigger: TCCCTGATTCTCCACGCAGCAGACATCAGCCACCCA...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACTCTTCAGGTCCACTaGTGCAAGGGAGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHTLQVH*CKGVVW
Trigger: CCAGACTACTCCCTTGCAGCAGTGGACCTGAAGAGT...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCTCACCTCTTTCCAGCTaGTTCACCAAGCATCTTAGT +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASSPLSS*FTKHLS
Trigger: ACTAAGATGCTTGGTGAAGCAGCTGGAAAGAGGTGA...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTTCAGGGACATGGTTTTaGCTCTGTCAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLSGTWF*LCQSLQ
Trigger: CTGAAGGGATTGACAGAGCCAAAACCATGTCCCTGA...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTTCAGGGACATGGTTTTaGCTCTGTCAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLSGTWF*LCQSLQ
Trigger: CTGAAGGGATTGACAGAGCCAAAACCATGTCCCTGA...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTGGAGAATCAGGGACATaGTTTTGGCTCTGTCAATCC +
Preference number: 4 (lower is better)
Translates to: IKISKSFGQIRAATMHEVGESGT*FWLCQS
Trigger: GGATTGACAGAGCCAAAACCATGTCCCTGATTCTCC...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTGGAGAATCAGGGACATaGTTTTGGCTCTGTCAATCC +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFGESGT*FWLCQS
Trigger: GGATTGACAGAGCCAAAACCATGTCCCTGATTCTCC...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGGGAGAATCAGGGACATaGTTTTGGCTCTGTCAATCC +
Preference number: 4 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMGESGT*FWLCQS
Trigger: GGATTGACAGAGCCAAAACCATGTCCCTGATTCTCC...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTCAGGATTTGGCTGGGTaGCTGATGTCTGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSQDLAG*LMSAAW
Trigger: CCACGCAGCAGACATCAGCCACCCAGCCAAATCCTG...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACGTGACTGGGCCACCATaGTTGACTTCCGATCACAAA +
Preference number: 4 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNVTGPP*LTSDHK
Trigger: TTTGTGATCGGAAGTCAACCATGGTGGCCCAGTCAC...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAAGTAACCCCACAATGGTaGTTGAGCTGCTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKVTPQW*LSCLPH
Trigger: ATGTGGCAAGCAGCTCAACCACCATTGTGGGGTTAC...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAATGCAAGGGAGTAGTCTaGGGAATAGGACCCATCACT +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKCKGVV*GIGPIT
Trigger: AGTGATGGGTCCTATTCCCCAGACTACTCCCTTGCA...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACTGCAAGGGAGTAGTCTaGGGAATAGGACCCATCACT +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHCKGVV*GIGPIT
Trigger: AGTGATGGGTCCTATTCCCCAGACTACTCCCTTGCA...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATATAAGTCGCATAACCTaGAAAATTAGGTTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: APLLDCSIALMLQPAPQHISRIT*KIRLKP
Trigger: GGGCTTTAACCTAATTTTCCAGGTTATGCGACTTAT...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACAGGGACTGAGTCAGTCTaGATGTCACTGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATGTESV*MSLSSS
Trigger: AGATGAGCTCAGTGACATTCAGACTGACTCAGTCCC...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
CDS-3UTR TCA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACAGGGACTGAGTCAGTCTaGATGTCACTGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTGTESV*MSLSSS
Trigger: AGATGAGCTCAGTGACATTCAGACTGACTCAGTCCC...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCACAAAAATTCCAGCTTaGACAGCATGCACAATGCTC +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASTKIPA*TACTML
Trigger: GAGCATTGTGCATGCTGTTCAAGCTGGAATTTTTGT...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGCCTTTAATGTTACGATaGCAGCTGCTGGATATGCCA +
Preference number: 4 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMPLMLR*QLLDMP
Trigger: TGGCATATCCAGCAGCTGTCATCGTAACATTAAAGG...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGAGAAGTTTCGGCTTTTaGGGCTTCCTCTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMRSFGF*GFLYKR
Trigger: CCTCTTATAGAGGAAGCCTCAAAAGCCGAAACTTCT...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTCTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFLCSAE*CPPGCS
Trigger: AGAACAACCTGGTGGACATCATTCAGCAGAACAAAG...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATCTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYLCSAE*CPPGCS
Trigger: AGAACAACCTGGTGGACATCATTCAGCAGAACAAAG...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAACTCTCTTTGTTCTGCTaGATGATGTCCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLELSLFC*MMSTRL
Trigger: CAACCTGGTGGACATCATTCAGCAGAACAAAGAGAG...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCAAACTCACACTTCTGTaGACTGGTTCTTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASKLTLL*TGSCFL
Trigger: CAAGAAGCAAGAACCAGTTCACAGAAGTGTGAGTTT...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTGATGTAGCCACTAGATaGATCTGTTCGGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLDVATR*ICSVAV
Trigger: AACTGCTACCGAACAGATTCATCTAGTGGCTACATC...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGCACCAAGAGTCACGTTaGTCCAGGCAAGAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEHQESR*SRQEKC
Trigger: GCACTTCTCTTGCCTGGATCAACGTGACTCTTGGTG...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR TCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAGCTGATGTACAAAGCTaGGGGAAGACTCTGACAGAT +
Preference number: 4 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLEADVQS*GKTLTD
Trigger: ATCTGTCAGAGTCTTCCCTCAGCTTTGTACATCAGC...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTCATAAGTCGATAAGCTaGACTCACGTGGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: IKISKSFGQIRAATMHEVHKSIS*THVVIL
Trigger: GAGAATCACCACGTGAGTGCAGCTTATCGACTTATG...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp TCTTCAGATGGCCTCAACAGTAATGTTTGCAGAAAGACATGCACAGATAACCTCCATAAGTCGATAAGCTaGACTCACGTGGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: SSDGLNSNVCRKTCTDNLHKSIS*THVVIL
Trigger: GAGAATCACCACGTGAGTGCAGCTTATCGACTTATG...GAGGTTATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAGGCCATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACACCACAGAGCAGGGTGTaGAAAAACCACCAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATPQSRV*KNHQES
Trigger: TGACTCTTGGTGGTTTTTGCACACCCTGCTCTGTGG...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR GCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTCTTTCTCTTTTTGGGTaGTGGGAGAAAACTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLLSLFG*WEKTSL
Trigger: CAGGGAAGTTTTCTCCCAGCACCCAAAAAGAGAAAG...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR GCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGCCTGATCTATTGTGCTaGAAGGAGCCCAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVPDLLC*KEPRKK
Trigger: TTTCTTTCTGGGCTCCTTGCAGCACAATAGATCAGG...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR GCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTTCATCGATATAAACTaGTTCCAGCACAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFFIDIN*FQHRCR
Trigger: GCGGCATCTGTGCTGGAAGCAGTTTATATCGATGAA...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000410103.1
CDS-3UTR GCA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACGCAGGACATTCACGGTaGAACAGCCTAACCTATCAA +
Preference number: 4 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNAGHSR*NSLTYQ
Trigger: TTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGC...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTTACGATGACAGCTGCTaGATATGCCAAACCAACCAT +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLYDDSC*ICQTNH
Trigger: ATGGTTGGTTTGGCATATCCAGCAGCTGTCATCGTA...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACTCAGGGACATGGTTTTaGCTCTGTCAATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHSGTWF*LCQSLQ
Trigger: CTGAAGGGATTGACAGAGCCAAAACCATGTCCCTGA...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACCTGATGTCTGCTGCGTaGAGAATCAGGGACATGGTT +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHLMSAA*RIRDMV
Trigger: AACCATGTCCCTGATTCTCCACGCAGCAGACATCAG...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACGTGACTGGGCCACCATaGTTGACTTCCGATCACAAA +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHVTGPP*LTSDHK
Trigger: TTTGTGATCGGAAGTCAACCATGGTGGCCCAGTCAC...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTAAACCTATTTGTGACTaGGCCACCATGGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFKPICD*ATMVDF
Trigger: GAAGTCAACCATGGTGGCCCAGTCACAAATAGGTTT...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAACCTATTTGTGACTaGGCCACCATGGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLKPICD*ATMVDF
Trigger: GAAGTCAACCATGGTGGCCCAGTCACAAATAGGTTT...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACAGTAACCCCACAATGGTaGTTGAGCTGCTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATVTPQW*LSCLPH
Trigger: ATGTGGCAAGCAGCTCAACCACCATTGTGGGGTTAC...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
CDS-3UTR CCA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACAGTAACCCCACAATGGTaGTTGAGCTGCTTGCCACAT +
Preference number: 4 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTVTPQW*LSCLPH
Trigger: ATGTGGCAAGCAGCTCAACCACCATTGTGGGGTTAC...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCAGGACCCATCACTCATaGAGCCTTTTGTATTTGATC +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASRTHHS*SLLYLI
Trigger: GATCAAATACAAAAGGCTCCATGAGTGATGGGTCCT...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTTCTCCTTCCACATGCTaGTCAAGCTCCGAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFSPSTC*SSSERL
Trigger: TAGCCTTTCGGAGCTTGACCAGCATGTGGAAGGAGA...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR CCA 90 bp TCTTCAGATGGCCTCAACAGTAATGTTTGCAGAAAGACATGCACAGATAACCTCGTCTGTCTCCAGCAATaGTTGACGGTCTTGTTATCA +
Preference number: 4 (lower is better)
Translates to: SSDGLNSNVCRKTCTDNLVCLQQ*LTVLLS
Trigger: TGATAACAAGACCGTCAACCATTGCTGGAGACAGAC...GAGGTTATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAGGCCATCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACAGACTTCAGATGGGACTaGGTCAGTCTGAATGTCACT +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATDFRWD*VSLNVT
Trigger: AGTGACATTCAGACTGACTCAGTCCCATCTGAAGTC...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
CDS-3UTR TCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTAATGCACAGTTTGAGTaGCATCAGCTGCATGAATCA +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLNAQFE*HQLHES
Trigger: TGATTCATGCAGCTGATGTCACTCAAACTGTGCATT...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTAATGCACAGTTTGAGTaGCATCAGCTGCATGAATCA +
Preference number: 4 (lower is better)
Translates to: IKISKSFGQIRAATMHEVNAQFE*HQLHES
Trigger: TGATTCATGCAGCTGATGTCACTCAAACTGTGCATT...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCTTAATTTGCTGGAAGTaGCCTGACATGTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASLICWK*PDMSVD
Trigger: ATCTACAGACATGTCAGGTCACTTCCAGCAAATTAA...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAAAGAAGTTTCGGCTTTTaGGGCTTCCTCTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKRSFGF*GFLYKR
Trigger: CCTCTTATAGAGGAAGCCTCAAAAGCCGAAACTTCT...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGCCACCAGGTTGTTCTTaGAACTCTTCAGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEPPGCS*NSSGPL
Trigger: CAGTGGACCTGAAGAGTTTCAAGAACAACCTGGTGG...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCTCTCTTTGTTCTGCTaGATGATGTCCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFLSLFC*MMSTRL
Trigger: CAACCTGGTGGACATCATTCAGCAGAACAAAGAGAG...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTAAACTCACACTTCTGTaGACTGGTTCTTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFKLTLL*TGSCFL
Trigger: CAAGAAGCAAGAACCAGTTCACAGAAGTGTGAGTTT...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTAATGCATTCGTGCTTTaGAACCATGGGGACGGACGC +
Preference number: 4 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSNAFVL*NHGDGR
Trigger: GCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATT...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTGACAGCTGCTGGATATaGCAAACCAACCATATGATA +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFDSCWI*QTNHMI
Trigger: TATCATATGGTTGGTTTGGCATATCCAGCAGCTGTC...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAATGTTACGATGACAGCTaGTGGATATGCCAAACCAAC +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKCYDDS*WICQTN
Trigger: GTTGGTTTGGCATATCCAGCAGCTGTCATCGTAACA...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACTGTTACGATGACAGCTaGTGGATATGCCAAACCAAC +
Preference number: 4 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNCYDDS*WICQTN
Trigger: GTTGGTTTGGCATATCCAGCAGCTGTCATCGTAACA...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCTCAATCCCTTCAGGCTaGTGCAAACTGTTTCTTATA +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASSIPSG*CKLFLI
Trigger: TATAAGAAACAGTTTGCAGCAGCCTGAAGGGATTGA...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTGCTTCTTTATCTCCCTaGAGGAAAAACTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLASLSP*RKNSSI
Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGATAAAGAAGC...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGTTAGAGCTGCCACCATaGACGAGGTTTTACTTAAAG +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVLELPP*TRFYLK
Trigger: CTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAA...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTAGAGCTGCCACCATaGACGAGGTTTTACTTAAAG +
Preference number: 4 (lower is better)
Translates to: IKISKSFGQIRAATMHEVLELPP*TRFYLK
Trigger: CTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAA...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAATTCATCGATATAAACTaGTTCCAGCACAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKFIDIN*FQHRCR
Trigger: GCGGCATCTGTGCTGGAAGCAGTTTATATCGATGAA...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000410103.1
CDS-3UTR GCA 90 bp TCTTCAGATGGCCTCAACAGTAATGTTTGCAGAAAGACATGCACAGATAACCTCCTTCTGCACATGTATTaGACAGTCATTATGACAGGG +
Preference number: 4 (lower is better)
Translates to: SSDGLNSNVCRKTCTDNLLLHMY*TVIMTG
Trigger: CCCTGTCATAATGACTGTGCAATACATGTGCAGAAG...GAGGTTATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAGGCCATCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp GCAGAAGCACTGGCCAAAAACTCTGATAAAAACTTGAGTGTATTTATTTGGCCATGCCATATGCATATATaGACCATGCTTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AEALAKNSDKNLSVFIWPCHMHI*TMLPAR
Trigger: CCTGGCTGGAAGCATGGTGCATATATGCATATGGCA...TGGCCAAATAAATACACTCAAGTTTTTATCAGAGTTTTTGGCCAGTGCTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp GCAGAAGCACTGGCCAAAAACTCTGATAAAAACTTGAGTGTATTTATTTGGCCAGGAGAATCAGGGACATaGTTTTGGCTCTGTCAATCC +
Preference number: 4 (lower is better)
Translates to: AEALAKNSDKNLSVFIWPGESGT*FWLCQS
Trigger: GGATTGACAGAGCCAAAACCATGTCCCTGATTCTCC...TGGCCAAATAAATACACTCAAGTTTTTATCAGAGTTTTTGGCCAGTGCTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACAAACCTATTTGTGACTaGGCCACCATGGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNKPICD*ATMVDF
Trigger: GAAGTCAACCATGGTGGCCCAGTCACAAATAGGTTT...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGTGTGTAACCCCACAATaGTGGTTGAGCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIECVTPQ*WLSCLP
Trigger: TGGCAAGCAGCTCAACCACCATTGTGGGGTTACACA...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTAGGACCCATCACTCATaGAGCCTTTTGTATTTGATC +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFRTHHS*SLLYLI
Trigger: GATCAAATACAAAAGGCTCCATGAGTGATGGGTCCT...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp GCAGAAGCACTGGCCAAAAACTCTGATAAAAACTTGAGTGTATTTATTTGGCCAATCAGGTCACCTAGCTaGGGATCTAATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: AEALAKNSDKNLSVFIWPIRSPS*GSNAPL
Trigger: CAATGGAGCATTAGATCCCCAGCTAGGTGACCTGAT...TGGCCAAATAAATACACTCAAGTTTTTATCAGAGTTTTTGGCCAGTGCTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAACAAAAATTCCAGCTTaGACAGCATGCACAATGCTC +
Preference number: 4 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLETKIPA*TACTML
Trigger: GAGCATTGTGCATGCTGTTCAAGCTGGAATTTTTGT...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTTTAATTTGCTGGAAGTaGCCTGACATGTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLLICWK*PDMSVD
Trigger: ATCTACAGACATGTCAGGTCACTTCCAGCAAATTAA...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTTAATTTGCTGGAAGTaGCCTGACATGTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMLICWK*PDMSVD
Trigger: ATCTACAGACATGTCAGGTCACTTCCAGCAAATTAA...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACAGAAGTTTCGGCTTTTaGGGCTTCCTCTATAAGAGG +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHRSFGF*GFLYKR
Trigger: CCTCTTATAGAGGAAGCCTCAAAAGCCGAAACTTCT...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACACTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATLCSAE*CPPGCS
Trigger: AGAACAACCTGGTGGACATCATTCAGCAGAACAAAG...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
CDS-3UTR TCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACGATGTAGCCACTAGATaGATCTGTTCGGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHDVATR*ICSVAV
Trigger: AACTGCTACCGAACAGATTCATCTAGTGGCTACATC...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTATTGAAACAGATATCTaGAAGCACAAGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFIETDI*KHKVLM
Trigger: CATCAGCACCTTGTGCTTTCAGATATCTGTTTCAAT...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGATTGAAACAGATATCTaGAAGCACAAGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVIETDI*KHKVLM
Trigger: CATCAGCACCTTGTGCTTTCAGATATCTGTTTCAAT...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTATTGAAACAGATATCTaGAAGCACAAGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLIETDI*KHKVLM
Trigger: CATCAGCACCTTGTGCTTTCAGATATCTGTTTCAAT...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGGCCACAAAATGCCATTaGAACAGATATCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVATKCH*NRYLKA
Trigger: TGCTTTCAGATATCTGTTTCAATGGCATTTTGTGGC...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAACTATCAAAACAGTGCTaGTGTACAAAGCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLELSKQC*CTKLRE
Trigger: TTCCCTCAGCTTTGTACATCAGCACTGTTTTGATAG...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp TCTTCAGATGGCCTCAACAGTAATGTTTGCAGAAAGACATGCACAGATAACCTCTTTATCTGGCTTGATTaGAGAAGGCCAAATTGTGGA +
Preference number: 4 (lower is better)
Translates to: SSDGLNSNVCRKTCTDNLFIWLD*RRPNCG
Trigger: TCCACAATTTGGCCTTCTTCAATCAAGCCAGATAAA...GAGGTTATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAGGCCATCTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACTGTTACGATGACAGCTaGTGGATATGCCAAACCAAC +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHCYDDS*WICQTN
Trigger: GTTGGTTTGGCATATCCAGCAGCTGTCATCGTAACA...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACACATAAGTCGATAAGCTaGACTCACGTGGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATHKSIS*THVVIL
Trigger: GAGAATCACCACGTGAGTGCAGCTTATCGACTTATG...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
CDS-3UTR GCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTTCAATCCCTTCAGGCTaGTGCAAACTGTTTCTTATA +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLSIPSG*CKLFLI
Trigger: TATAAGAAACAGTTTGCAGCAGCCTGAAGGGATTGA...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGCTTCTTTATCTCCCTaGAGGAAAAACTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHASLSP*RKNSSI
Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGATAAAGAAGC...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACTTAGAGCTGCCACCATaGACGAGGTTTTACTTAAAG +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHLELPP*TRFYLK
Trigger: CTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAA...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACTCACCTCTTTCCAGCTaGTTCACCAAGCATCTTAGT +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHSPLSS*FTKHLS
Trigger: ACTAAGATGCTTGGTGAAGCAGCTGGAAAGAGGTGA...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000410103.1
CDS-3UTR GCA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACATCACCTCTTTCCAGCTaGTTCACCAAGCATCTTAGT +
Preference number: 4 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTSPLSS*FTKHLS
Trigger: ACTAAGATGCTTGGTGAAGCAGCTGGAAAGAGGTGA...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACAAACCTATTTGTGACTaGGCCACCATGGTTGACTTC +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHKPICD*ATMVDF
Trigger: GAAGTCAACCATGGTGGCCCAGTCACAAATAGGTTT...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTACAAAAATTCCAGCTTaGACAGCATGCACAATGCTC +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFTKIPA*TACTML
Trigger: GAGCATTGTGCATGCTGTTCAAGCTGGAATTTTTGT...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTGCCAAACCAACCATATaGTATGTTTTTCGGTACATT +
Preference number: 4 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLAKPTI*YVFRYI
Trigger: AATGTACCGAAAAACATATCATATGGTTGGTTTGGC...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACAAATGCACAGTTTGAGTaGCATCAGCTGCATGAATCA +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATNAQFE*HQLHES
Trigger: TGATTCATGCAGCTGATGTCACTCAAACTGTGCATT...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
CDS-3UTR TCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAACAAAATGGCAACATCTaGCCTTGTCTGAATGTGAAA +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKQNGNI*PCLNVK
Trigger: TTTCACATTCAGACAAGGTCAGATGTTGCCATTTTG...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGCTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIELCSAE*CPPGCS
Trigger: AGAACAACCTGGTGGACATCATTCAGCAGAACAAAG...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTAAACTCACACTTCTGTaGACTGGTTCTTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFKLTLL*TGSCFL
Trigger: CAAGAAGCAAGAACCAGTTCACAGAAGTGTGAGTTT...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGCCACAAAATGCCATTaGAACAGATATCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHATKCH*NRYLKA
Trigger: TGCTTTCAGATATCTGTTTCAATGGCATTTTGTGGC...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGTGTGGAAGCTTATCCTaGTCTATTGTGCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIECGSLS*SIVLQG
Trigger: TCCTTGCAGCACAATAGATCAGGATAAGCTTCCACA...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR TCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAATTGCACAGTCATTATaGCAGGGTTCAAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLEIAQSL*QGSKQE
Trigger: TTCTTGCTTTGAACCCTGTCATAATGACTGTGCAAT...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATACATCTAATTGTGCTTaGTCTTTCTTGTCAGCTAAC +
Preference number: 4 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYTSNCA*SFLSAN
Trigger: GTTAGCTGACAAGAAAGATCAAGCACAATTAGATGT...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGGAACAGCATGCACAATaGTCCGAAATTTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVEQHAQ*SEILVF
Trigger: AAAAACCAAAATTTCGGAGCATTGTGCATGCTGTTC...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp TCTTCAGATGGCCTCAACAGTAATGTTTGCAGAAAGACATGCACAGATAACCTCGAACAGCATGCACAATaGTCCGAAATTTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SSDGLNSNVCRKTCTDNLEQHAQ*SEILVF
Trigger: AAAAACCAAAATTTCGGAGCATTGTGCATGCTGTTC...GAGGTTATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAGGCCATCTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACGACAGCTGCTGGATATaGCAAACCAACCATATGATA +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHDSCWI*QTNHMI
Trigger: TATCATATGGTTGGTTTGGCATATCCAGCAGCTGTC...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCTTGAGTGACATCAGCTaGATGAATCAAATTGTGATA +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASLSDIS*MNQIVI
Trigger: TATCACAATTTGATTCATGCAGCTGATGTCACTCAA...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGATCCCTTCAGGCTGCTaGAAACTGTTTCTTATATTT +
Preference number: 4 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMIPSGC*KLFLIF
Trigger: AAATATAAGAAACAGTTTGCAGCAGCCTGAAGGGAT...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGAAATACCTCATCTTCTaGACATGTATTGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: LPYAYMHHASSQELMNNRKYLIF*TCIAQS
Trigger: TGACTGTGCAATACATGTGCAGAAGATGAGGTATTT...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACGAAAACTTGTTAGGATaGATGGATCCTCCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNENLLG*MDPPLH
Trigger: ATGCAAAGGAGGATCCATGCATCCTAACAAGTTTTC...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACGAAGTTTGGTCACAGTaGTTTATAAGTCGCATAACC +
Preference number: 4 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNEVWSQ*FISRIT
Trigger: GGTTATGCGACTTATAAAGCACTGTGACCAAACTTC...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCGATCATTATACAAAATaGCAACATCTGACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASDHYTK*QHLTLS
Trigger: AGACAAGGTCAGATGTTGCCATTTTGTATAATGATC...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTAGGACCCATCACTCATaGAGCCTTTTGTATTTGATC +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFRTHHS*SLLYLI
Trigger: GATCAAATACAAAAGGCTCCATGAGTGATGGGTCCT...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGTATCAATTTTTAAGTTaGTCTCCTTTGGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPYAYMHHASSQELMNNRYQFLS*SPLGFP
Trigger: GGGGAAACCCAAAGGAGACCAACTTAAAAATTGATA...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACGCCAAACCAACCATATaGTATGTTTTTCGGTACATT +
Preference number: 4 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNAKPTI*YVFRYI
Trigger: AATGTACCGAAAAACATATCATATGGTTGGTTTGGC...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTCCTTTAATGTTACGATaGCAGCTGCTGGATATGCCA +
Preference number: 4 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSPLMLR*QLLDMP
Trigger: TGGCATATCCAGCAGCTGTCATCGTAACATTAAAGG...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCAAAATGGCAACATCTaGCCTTGTCTGAATGTGAAA +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFQNGNI*PCLNVK
Trigger: TTTCACATTCAGACAAGGTCAGATGTTGCCATTTTG...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAATCTTCTGAGTTCTTATaGAGATCAGATTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLESSEFL*RSDSPC
Trigger: ACAAGGTGAATCTGATCTTCATAAGAACTCAGAAGA...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTGGTGTTTCGGGCCTATaGATGTGTCTCATCATGTTT +
Preference number: 4 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSGVSGL*MCLIMF
Trigger: AAACATGATGAGACACATTCATAGGCCCGAAACACC...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAAGAACAGCATGCACAATaGTCCGAAATTTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKEQHAQ*SEILVF
Trigger: AAAAACCAAAATTTCGGAGCATTGTGCATGCTGTTC...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATATAAACTTCAGACTATaGTCTCCACTTGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYINFRL*SPLASF
Trigger: AAATGAAGCAAGTGGAGAGCATAGTCTGAAGTTTAT...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGTTGAGTGACATCAGCTaGATGAATCAAATTGTGATA +
Preference number: 4 (lower is better)
Translates to: LPYAYMHHASSQELMNNRLSDIS*MNQIVI
Trigger: TATCACAATTTGATTCATGCAGCTGATGTCACTCAA...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAAATCCCTTCAGGCTGCTaGAAACTGTTTCTTATATTT +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKIPSGC*KLFLIF
Trigger: AAATATAAGAAACAGTTTGCAGCAGCCTGAAGGGAT...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATCCCTTCAGGCTGCTaGAAACTGTTTCTTATATTT +
Preference number: 4 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNIPSGC*KLFLIF
Trigger: AAATATAAGAAACAGTTTGCAGCAGCCTGAAGGGAT...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp GCAGAAGCACTGGCCAAAAACTCTGATAAAAACTTGAGTGTATTTATTTGGCCATCAATCCCTTCAGGCTaGTGCAAACTGTTTCTTATA +
Preference number: 4 (lower is better)
Translates to: AEALAKNSDKNLSVFIWPSIPSG*CKLFLI
Trigger: TATAAGAAACAGTTTGCAGCAGCCTGAAGGGATTGA...TGGCCAAATAAATACACTCAAGTTTTTATCAGAGTTTTTGGCCAGTGCTTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGGCTTCTTTATCTCCCTaGAGGAAAAACTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEASLSP*RKNSSI
Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGATAAAGAAGC...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTTGCTTCCAGCACAGATaGCGCATATTCAATATTCTT +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFCFQHR*RIFNIL
Trigger: AAGAATATTGAATATGCGGCATCTGTGCTGGAAGCA...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000410103.1
CDS-3UTR GCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTTTCATCGATATAAACTaGTTCCAGCACAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSFIDIN*FQHRCR
Trigger: GCGGCATCTGTGCTGGAAGCAGTTTATATCGATGAA...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACTCTGTTACTGTTCTGTaGACTGAAGCACATCAGAAT +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHSVTVL*TEAHQN
Trigger: ATTCTGATGTGCTTCAGTGCACAGAACAGTAACAGA...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410103.1
CDS-3UTR GCA 90 bp TTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAACTCAACAGTAATGTTTaGAGAAAGACATGCACAGAT +
Preference number: 4 (lower is better)
Translates to: LLSLEVWSQCFISRITWKLNSNV*RKTCTD
Trigger: ATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAG...TTTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTAATGCTCCGAAATTTTaGTTTTTCCTCAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFNAPKF*FFLRFL
Trigger: AAGAAACCTGAGGAAAAACCAAAATTTCGGAGCATT...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAATGCTCCGAAATTTTaGTTTTTCCTCAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLNAPKF*FFLRFL
Trigger: AAGAAACCTGAGGAAAAACCAAAATTTCGGAGCATT...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGAATGCTCCGAAATTTTaGTTTTTCCTCAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPYAYMHHASSQELMNNRNAPKF*FFLRFL
Trigger: AAGAAACCTGAGGAAAAACCAAAATTTCGGAGCATT...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGGATCATTATACAAAATaGCAACATCTGACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVDHYTK*QHLTLS
Trigger: AGACAAGGTCAGATGTTGCCATTTTGTATAATGATC...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTGATCATTATACAAAATaGCAACATCTGACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: IKISKSFGQIRAATMHEVDHYTK*QHLTLS
Trigger: AGACAAGGTCAGATGTTGCCATTTTGTATAATGATC...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGGATCATTATACAAAATaGCAACATCTGACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LPYAYMHHASSQELMNNRDHYTK*QHLTLS
Trigger: AGACAAGGTCAGATGTTGCCATTTTGTATAATGATC...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGCAGAAGAGAAAATGTTaGCTCTACTATGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVQKRKC*LYYEID
Trigger: ATCGATTTCATAGTAGAGCCAACATTTTCTCTTCTG...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGCAGAAGAGAAAATGTTaGCTCTACTATGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: LPYAYMHHASSQELMNNRQKRKC*LYYEID
Trigger: ATCGATTTCATAGTAGAGCCAACATTTTCTCTTCTG...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACATCCAGAGAGGAAATGTaGAAGCTTATCCTGATCTAT +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATSREEM*KLILIY
Trigger: ATAGATCAGGATAAGCTTCCACATTTCCTCTCTGGA...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS-3UTR CCA 90 bp GCAGAAGCACTGGCCAAAAACTCTGATAAAAACTTGAGTGTATTTATTTGGCCACTGTCTCTGGAAGTTTaGTCACAGTGCTTTATAAGT +
Preference number: 4 (lower is better)
Translates to: AEALAKNSDKNLSVFIWPLSLEV*SQCFIS
Trigger: ACTTATAAAGCACTGTGACCAAACTTCCAGAGACAG...TGGCCAAATAAATACACTCAAGTTTTTATCAGAGTTTTTGGCCAGTGCTTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACGCCAAACCAACCATATaGTATGTTTTTCGGTACATT +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHAKPTI*YVFRYI
Trigger: AATGTACCGAAAAACATATCATATGGTTGGTTTGGC...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGCAAAATGGCAACATCTaGCCTTGTCTGAATGTGAAA +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEQNGNI*PCLNVK
Trigger: TTTCACATTCAGACAAGGTCAGATGTTGCCATTTTG...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR TCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTACTGTAGATAGCATGTaGCTTGCTTGTAACCACAAC +
Preference number: 4 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSTVDSM*LACNHN
Trigger: GTTGTGGTTACAAGCAAGTCACATGCTATCTACAGT...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp ATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCATAATCAAAATAAACTTCAGACTATaGTCTCCACTTGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: IDFLSHTGQGRFPASIIKINFRL*SPLASF
Trigger: AAATGAAGCAAGTGGAGAGCATAGTCTGAAGTTTAT...TTTGATTATGCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACTTGAGTGACATCAGCTaGATGAATCAAATTGTGATA +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHLSDIS*MNQIVI
Trigger: TATCACAATTTGATTCATGCAGCTGATGTCACTCAA...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTGCTTCTTTATCTCCCTaGAGGAAAAACTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSASLSP*RKNSSI
Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGATAAAGAAGC...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGTGCTTCCAGCACAGATaGCGCATATTCAATATTCTT +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIECFQHR*RIFNIL
Trigger: AAGAATATTGAATATGCGGCATCTGTGCTGGAAGCA...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000410103.1
CDS-3UTR GCA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACAGGAAATATTGCCATATaGATATATGCACCATGCTTC +
Preference number: 4 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTGNIAI*IYAPCF
Trigger: GAAGCATGGTGCATATATGCATATGGCAATATTTCC...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACAATGCTCCGAAATTTTaGTTTTTCCTCAGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHNAPKF*FFLRFL
Trigger: AAGAAACCTGAGGAAAAACCAAAATTTCGGAGCATT...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACCAGAAGAGAAAATGTTaGCTCTACTATGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: SIIKISKSFGQIRAATMHQKRKC*LYYEID
Trigger: ATCGATTTCATAGTAGAGCCAACATTTTCTCTTCTG...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAATTGAGTGTATTTATTTaGCCAGAGTTACTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLELSVFI*PELLAQ
Trigger: TTGAGCTAGTAACTCTGGCCAAATAAATACACTCAA...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGGCCAAACCAACCATATaGTATGTTTTTCGGTACATT +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEAKPTI*YVFRYI
Trigger: AATGTACCGAAAAACATATCATATGGTTGGTTTGGC...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACAATAAACTTCAGACTATaGTCTCCACTTGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: AISCSKKIYWHSVKTNATINFRL*SPLASF
Trigger: AAATGAAGCAAGTGGAGAGCATAGTCTGAAGTTTAT...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
CDS-3UTR GCA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACTTGAGTGACATCAGCTaGATGAATCAAATTGTGATA +
Preference number: 4 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHLSDIS*MNQIVI
Trigger: TATCACAATTTGATTCATGCAGCTGATGTCACTCAA...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGATCCCTTCAGGCTGCTaGAAACTGTTTCTTATATTT +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEIPSGC*KLFLIF
Trigger: AAATATAAGAAACAGTTTGCAGCAGCCTGAAGGGAT...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCAGAAGAGAAAATGTTaGCTCTACTATGAAATCGAT +
Preference number: 4 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFQKRKC*LYYEID
Trigger: ATCGATTTCATAGTAGAGCCAACATTTTCTCTTCTG...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CCA 90 bp GCAGAAGCACTGGCCAAAAACTCTGATAAAAACTTGAGTGTATTTATTTGGCCAGCAAGATATATATGTTaGGGAGCTGAGGTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: AEALAKNSDKNLSVFIWPARYIC*GAEVKN
Trigger: ATTTTTAACCTCAGCTCCCCAACATATATATCTTGC...TGGCCAAATAAATACACTCAAGTTTTTATCAGAGTTTTTGGCCAGTGCTTCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR TCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTATTTATGGCTACTCCTaGTTCTTTCCAGCCAATTTT +
Preference number: 4 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSIYGYS*FFPANF
Trigger: AAAATTGGCTGGAAAGAATCAGGAGTAGCCATAAAT...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR GCA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGATAAACTTCAGACTATaGTCTCCACTTGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEINFRL*SPLASF
Trigger: AAATGAAGCAAGTGGAGAGCATAGTCTGAAGTTTAT...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR GCA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTGAAGCTCACAATCATTaGAATGCTTGTACAGTGAAA +
Preference number: 4 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSEAHNH*NACTVK
Trigger: TTTCACTGTACAAGCATTGCAATGATTGTGAGCTTC...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS CCA 90 bp CCAGCTGAGCAGTGTGTCCATAGAGGCCACATAAGACAGGCACGTTaGGGCACTCCCCCACAGAGCAGGGTGTGCAAAAACCACCAAGAG +
Preference number: 5 (lower is better)
Translates to: PAEQCVHRGHIRQAR*GTPPQSRVCKNHQE
Trigger: CTCTTGGTGGTTTTTGCACACCCTGCTCTGTGGGGGAGTGCCCCAACGTGCCTGTCTTATGTGGCCTCTATGGACACACTGCTCAGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000409365.5
CDS TCA 90 bp CCATGGTCCACCGATAATGCAGCTTCCAGGATTTGGCTGGGTGGCTaGTGTCTGCTGCGTGGAGAATCAGGGACATGGTTTTGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: PWSTDNAASRIWLGG*CLLRGESGTWFWLC
Trigger: ACAGAGCCAAAACCATGTCCCTGATTCTCCACGCAGCAGACATCAGCCACCCAGCCAAATCCTGGAAGCTGCATTATCGGTGGACCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
CDS TCA 90 bp ACTCCCCCACAGAGCAGGGTGTGCAAAAACCACCAAGAGTCACGTTaGTCCAGGCAAGAGAAGTGCACGGGACCCTCCGAAACAGAACAA +
Preference number: 5 (lower is better)
Translates to: TPPQSRVCKNHQESR*SRQEKCTGPSETEQ
Trigger: TTGTTCTGTTTCGGAGGGTCCCGTGCACTTCTCTTGCCTGGATCAACGTGACTCTTGGTGGTTTTTGCACACCCTGCTCTGTGGGGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000409365.5
CDS-3UTR CAA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCTCCACCAGGTTGTTCTaGAAACTCTTCAGGTCCACT +
Preference number: 5 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSSTRLF*KLFRST
Trigger: AGTGGACCTGAAGAGTTTCAAGAACAACCTGGTGGA...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS GCA 90 bp AACTTCCTACCCCAGTGTCATCCAGGTAGGAACTCCCTAAGTTATTaGAGCCATGAGAGCTCTCCTTCCACATGCTGGTCAAGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: NFLPQCHPGRNSLSY*SHESSPSTCWSSSE
Trigger: TTCGGAGCTTGACCAGCATGTGGAAGGAGAGCTCTCATGGCTGCAATAACTTAGGGAGTTCCTACCTGGATGACACTGGGGTAGGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS CCA 90 bp CCACTGCTGCAAGGGAGTAGTCTGGGGAATAGGACCCATCACTCATaGAGCCTTTTGTATTTGATCGTCTTAGTGCATCAGCAATGTGTA +
Preference number: 5 (lower is better)
Translates to: PLLQGSSLGNRTHHS*SLLYLIVLVHQQCV
Trigger: TACACATTGCTGATGCACTAAGACGATCAAATACAAAAGGCTCCATGAGTGATGGGTCCTATTCCCCAGACTACTCCCTTGCAGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
CDS-3UTR CAA 90 bp ATGGAGGTAATGCATTCGTGCTTTGAAACCATGGGGACGGACGCAGGCTGGTCCTGTGAAAGTTGTTTGTaGTCCCTGTATGCTCATAAT +
Preference number: 5 (lower is better)
Translates to: MEVMHSCFETMGTDAGWSCESCL*SLYAHN
Trigger: ATTATGAGCATACAGGGACAACAAACAACTTTCACA...GGACCAGCCTGCGTCCGTCCCCATGGTTTCAAAGCACGAATGCATTACCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCACTGGGCCACCATGGTaGACTTCCGATCACAAAGTG +
Preference number: 5 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASTGPPW*TSDHKV
Trigger: CACTTTGTGATCGGAAGTCAACCATGGTGGCCCAGT...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTACCCCACAATGGTGGTaGAGCTGCTTGCCACATAGG +
Preference number: 5 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLTPQWW*SCLPHR
Trigger: CCTATGTGGCAAGCAGCTCAACCACCATTGTGGGGT...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGACCCCACAATGGTGGTaGAGCTGCTTGCCACATAGG +
Preference number: 5 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMTPQWW*SCLPHR
Trigger: CCTATGTGGCAAGCAGCTCAACCACCATTGTGGGGT...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp AGAGGAAATATTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATACCCCACAATGGTGGTaGAGCTGCTTGCCACATAGG +
Preference number: 5 (lower is better)
Translates to: RGNIAICIYAPCFQPGAYTPQWW*SCLPHR
Trigger: CCTATGTGGCAAGCAGCTCAACCACCATTGTGGGGT...ATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAATATTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATGGATCTAATGCTCCATaGTTGGACTGTAGCATTGCT +
Preference number: 5 (lower is better)
Translates to: APLLDCSIALMLQPAPQHGSNAP*LDCSIA
Trigger: AGCAATGCTACAGTCCAACAATGGAGCATTAGATCC...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATCAGCAGCAAAGACCATaGCTAAAATTTCCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: APLLDCSIALMLQPAPQHQQQRP*LKFPVQ
Trigger: CTGAACTGGAAATTTTAGCAATGGTCTTTGCTGCTG...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGACTGGGCCACCATGGTaGACTTCCGATCACAAAGTG +
Preference number: 5 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMTGPPW*TSDHKV
Trigger: CACTTTGTGATCGGAAGTCAACCATGGTGGCCCAGT...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGACTGGGCCACCATGGTaGACTTCCGATCACAAAGTG +
Preference number: 5 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVTGPPW*TSDHKV
Trigger: CACTTTGTGATCGGAAGTCAACCATGGTGGCCCAGT...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTACCCCACAATGGTGGTaGAGCTGCTTGCCACATAGG +
Preference number: 5 (lower is better)
Translates to: IEQSAKIDFLSHTGQGRFTPQWW*SCLPHR
Trigger: CCTATGTGGCAAGCAGCTCAACCACCATTGTGGGGT...AAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGATTGCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCTCCACCAGGTTGTTCTaGAAACTCTTCAGGTCCACT +
Preference number: 5 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASSTRLF*KLFRST
Trigger: AGTGGACCTGAAGAGTTTCAAGAACAACCTGGTGGA...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGGCTTATCCTGATCTATaGTGCTGCAAGGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVAYPDL*CCKEPR
Trigger: TCTGGGCTCCTTGCAGCACAATAGATCAGGATAAGC...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351439.9
CDS TCA 90 bp GAAACCACTCCAGAAACTCCAGAGAGGAAATGTGGAAGCTTATCCTaGTCTATTGTGCTGCAAGGAGCCCAGAAAGAAAAAGTAGTTTCC +
Preference number: 5 (lower is better)
Translates to: ETTPETPERKCGSLS*SIVLQGAQKEKVVS
Trigger: GGAAACTACTTTTTCTTTCTGGGCTCCTTGCAGCACAATAGATCAGGATAAGCTTCCACATTTCCTCTCTGGAGTTTCTGGAGTGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000409365.5
CDS-3UTR CAA 90 bp GCTCCATTGTTGGACTGTAGCATTGCTCTGATGCTTCAACCAGCTCCTCAGCATGGAATCTTGAAACGGTaGATAAGATCATATCTGGTA +
Preference number: 5 (lower is better)
Translates to: APLLDCSIALMLQPAPQHGILKR*IRSYLV
Trigger: TACCAGATATGATCTTATCAACCGTTTCAAGATTCC...ATGCTGAGGAGCTGGTTGAAGCATCAGAGCAATGCTACAGTCCAACAATGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTATCAGGGACATGGTTTaGGCTCTGTCAATCCCTTCA +
Preference number: 5 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLIRDMV*ALSIPS
Trigger: TGAAGGGATTGACAGAGCCAAAACCATGTCCCTGAT...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGATCAGGGACATGGTTTaGGCTCTGTCAATCCCTTCA +
Preference number: 5 (lower is better)
Translates to: LPYAYMHHASSQELMNNRIRDMV*ALSIPS
Trigger: TGAAGGGATTGACAGAGCCAAAACCATGTCCCTGAT...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTTGGTGGTTGAGCTGCTaGCCACATAGGAAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLWWLSC*PHRKKF
Trigger: AAACTTCTTCCTATGTGGCAAGCAGCTCAACCACCA...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTGGTGGTTGAGCTGCTaGCCACATAGGAAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: IKISKSFGQIRAATMHEVWWLSC*PHRKKF
Trigger: AAACTTCTTCCTATGTGGCAAGCAGCTCAACCACCA...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTGGTGGTTGAGCTGCTaGCCACATAGGAAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFWWLSC*PHRKKF
Trigger: AAACTTCTTCCTATGTGGCAAGCAGCTCAACCACCA...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TTGCCATATGCATATATGCACCATGCTTCCAGCCAGGAGCTTATGAATAATAGGTGGTGGTTGAGCTGCTaGCCACATAGGAAGAAGTTT +
Preference number: 5 (lower is better)
Translates to: LPYAYMHHASSQELMNNRWWLSC*PHRKKF
Trigger: AAACTTCTTCCTATGTGGCAAGCAGCTCAACCACCA...CCTATTATTCATAAGCTCCTGGCTGGAAGCATGGTGCATATATGCATATGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTCCACCAGGTTGTTCTaGAAACTCTTCAGGTCCACT +
Preference number: 5 (lower is better)
Translates to: IKISKSFGQIRAATMHEVSTRLF*KLFRST
Trigger: AGTGGACCTGAAGAGTTTCAAGAACAACCTGGTGGA...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp CAAAGCAGGACATTCACGGTGCAACAGCCTAACCTATCAATCCCTCTCTTCAGACTTGAGTGTATTTATTaGGCCAGAGTTACTAGCTCA +
Preference number: 5 (lower is better)
Translates to: QSRTFTVQQPNLSIPLFRLECIY*ARVTSS
Trigger: TGAGCTAGTAACTCTGGCCAAATAAATACACTCAAG...TCTGAAGAGAGGGATTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS GCA 90 bp ATATTCTTCTTTAAGTCGACGACGTTAACATCACCTCTTTCCAGCTaGTTCACCAAGCATCTTAGTATTCCTTTCAGGCGCTGCCACATT +
Preference number: 5 (lower is better)
Translates to: IFFFKSTTLTSPLSS*FTKHLSIPFRRCHI
Trigger: AATGTGGCAGCGCCTGAAAGGAATACTAAGATGCTTGGTGAAGCAGCTGGAAAGAGGTGATGTTAACGTCGTCGACTTAAAGAAGAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410103.1
ENST00000435564.5
ENST00000482782.5
ENST00000495511.1
CDS-3UTR CAA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACATCAGGGACATGGTTTaGGCTCTGTCAATCCCTTCA +
Preference number: 5 (lower is better)
Translates to: SIIKISKSFGQIRAATMHIRDMV*ALSIPS
Trigger: TGAAGGGATTGACAGAGCCAAAACCATGTCCCTGAT...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TCTGCAAAAATAGATTTCCTGTCTCACACAGGACAGGGTAGATTTCCAGCAAGCTGGAGCCTTTTGTATTaGATCGTCTTAGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: SAKIDFLSHTGQGRFPASWSLLY*IVLVHQ
Trigger: CTGATGCACTAAGACGATCAAATACAAAAGGCTCCA...GCTTGCTGGAAATCTACCCTGTCCTGTGTGAGACAGGAAATCTATTTTTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTCTGTGAACTGGTTCTaGCTTCTTGTGCAGCTAACT +
Preference number: 5 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMSVNWF*LLVQLT
Trigger: AGTTAGCTGCACAAGAAGCAAGAACCAGTTCACAGA...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp CAAAGCAGGACATTCACGGTGCAACAGCCTAACCTATCAATCCCTCTCTTCAGACTGACAGATTTGCTATaGACTTTGACAGGCATATAT +
Preference number: 5 (lower is better)
Translates to: QSRTFTVQQPNLSIPLFRLTDLL*TLTGIY
Trigger: ATATATGCCTGTCAAAGTCAATAGCAAATCTGTCAG...TCTGAAGAGAGGGATTGATAGGTTAGGCTGTTGCACCGTGAATGTCCTGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTGACTATGCTCTCCACTaGCTTCATTTAGGGCAAATA +
Preference number: 5 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLDYALH*LHLGQI
Trigger: TATTTGCCCTAAATGAAGCAAGTGGAGAGCATAGTC...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTGACTATGCTCTCCACTaGCTTCATTTAGGGCAAATA +
Preference number: 5 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFDYALH*LHLGQI
Trigger: TATTTGCCCTAAATGAAGCAAGTGGAGAGCATAGTC...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGCAGCAGCAAAGACCATaGCTAAAATTTCCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMQQQRP*LKFPVQ
Trigger: CTGAACTGGAAATTTTAGCAATGGTCTTTGCTGCTG...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTGGCAACATCTGACCTaGTCTGAATGTGAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: IKISKSFGQIRAATMHEVWQHLT*SECESC
Trigger: ACAACTTTCACATTCAGACAAGGTCAGATGTTGCCA...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTTGGCAACATCTGACCTaGTCTGAATGTGAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLWQHLT*SECESC
Trigger: ACAACTTTCACATTCAGACAAGGTCAGATGTTGCCA...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TCTTCAGATGGCCTCAACAGTAATGTTTGCAGAAAGACATGCACAGATAACCTCTGGCAACATCTGACCTaGTCTGAATGTGAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: SSDGLNSNVCRKTCTDNLWQHLT*SECESC
Trigger: ACAACTTTCACATTCAGACAAGGTCAGATGTTGCCA...GAGGTTATCTGTGCATGTCTTTCTGCAAACATTACTGTTGAGGCCATCTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTACTGGGCCACCATGGTaGACTTCCGATCACAAAGTG +
Preference number: 5 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSTGPPW*TSDHKV
Trigger: CACTTTGTGATCGGAAGTCAACCATGGTGGCCCAGT...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp AGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTAAAGGTGTGGAGCCTTTTGTATTaGATCGTCTTAGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: SLLVKLELPPCTRFYLKVWSLLY*IVLVHQ
Trigger: CTGATGCACTAAGACGATCAAATACAAAAGGCTCCA...CACCTTTAAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACTCTGTGAACTGGTTCTaGCTTCTTGTGCAGCTAACT +
Preference number: 5 (lower is better)
Translates to: SIIKISKSFGQIRAATMHSVNWF*LLVQLT
Trigger: AGTTAGCTGCACAAGAAGCAAGAACCAGTTCACAGA...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS GCA 90 bp ATATTCTTCTTTAAGTCGACGACGTTAACATCACCTCTTTCCAGCTaGTTCACCAAGCATCTTAGTCTAAAGATGGGTCTTTGGAGATGT +
Preference number: 5 (lower is better)
Translates to: IFFFKSTTLTSPLSS*FTKHLSLKMGLWRC
Trigger: ACATCTCCAAAGACCCATCTTTAGACTAAGATGCTTGGTGAAGCAGCTGGAAAGAGGTGATGTTAACGTCGTCGACTTAAAGAAGAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000409365.5
CDS-3UTR CAA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTCAATGCTCCGAAATTTaGGTTTTTCCTCAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLQCSEI*VFPQVS
Trigger: AGAAACCTGAGGAAAAACCAAAATTTCGGAGCATTG...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGCAATGCTCCGAAATTTaGGTTTTTCCTCAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMQCSEI*VFPQVS
Trigger: AGAAACCTGAGGAAAAACCAAAATTTCGGAGCATTG...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGATCAGGGACATGGTTTaGGCTCTGTCAATCCCTTCA +
Preference number: 5 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEIRDMV*ALSIPS
Trigger: TGAAGGGATTGACAGAGCCAAAACCATGTCCCTGAT...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACTGGAGCCTTTTGTATTaGATCGTCTTAGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: SIIKISKSFGQIRAATMHWSLLY*IVLVHQ
Trigger: CTGATGCACTAAGACGATCAAATACAAAAGGCTCCA...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp AGCATAATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACCACTCATGGAGCCTTTaGTATTTGATCGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: SIIKISKSFGQIRAATMHHSWSL*YLIVLV
Trigger: CACTAAGACGATCAAATACAAAAGGCTCCATGAGTG...GTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGATTATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAACACTCATGGAGCCTTTaGTATTTGATCGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: LLSLEVWSQCFISRITWKHSWSL*YLIVLV
Trigger: CACTAAGACGATCAAATACAAAAGGCTCCATGAGTG...TTTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGTCCACCAGGTTGTTCTaGAAACTCTTCAGGTCCACT +
Preference number: 5 (lower is better)
Translates to: GELRSLQLLFMWLMMLIESTRLF*KLFRST
Trigger: AGTGGACCTGAAGAGTTTCAAGAACAACCTGGTGGA...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACACACACACACACATTCTaGTCTCTTATCTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTHTHTF*SLISWL
Trigger: CAGCCAAGAGATAAGAGACAAGAATGTGTGTGTGTG...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACAAGCAAAGGAAAGACTTaGCACATGCTCAGGCAAAAC +
Preference number: 5 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTSKGKT*HMLRQN
Trigger: GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCT...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp GGTAGTTTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACCAATGCTCCGAAATTTaGGTTTTTCCTCAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GSFSALSKGKTLHMLRQNQCSEI*VFPQVS
Trigger: AGAAACCTGAGGAAAAACCAAAATTTCGGAGCATTG...GTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAAACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp TCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTGGAATCTTGAAACGGTaGATAAGATCATATCTGGTA +
Preference number: 5 (lower is better)
Translates to: SKSPSLLVKLELPPCTRFGILKR*IRSYLV
Trigger: TACCAGATATGATCTTATCAACCGTTTCAAGATTCC...AAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTGGAATCTTGAAACGGTaGATAAGATCATATCTGGTA +
Preference number: 5 (lower is better)
Translates to: IKISKSFGQIRAATMHEVGILKR*IRSYLV
Trigger: TACCAGATATGATCTTATCAACCGTTTCAAGATTCC...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATCAAAATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTCAAGAAACAGGAATCTaGAAACGGTTGATAAGATCA +
Preference number: 5 (lower is better)
Translates to: IKISKSFGQIRAATMHEVQETGI*KRLIRS
Trigger: TGATCTTATCAACCGTTTCAAGATTCCTGTTTCTTG...AACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp GCAATTAGCTGCTCAAAGAAAATTTATTGGCACTCGGTAAAGACAAATGCCACACAGCAGCAAAGACCATaGCTAAAATTTCCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: AISCSKKIYWHSVKTNATQQQRP*LKFPVQ
Trigger: CTGAACTGGAAATTTTAGCAATGGTCTTTGCTGCTG...TGTGGCATTTGTCTTTACCGAGTGCCAATAAATTTTCTTTGAGCAGCTAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000358139.6
CDS-3UTR CAA 90 bp GAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTTGTGAAAGTTGTTTGTaGTCCCTGTATGCTCATAAT +
Preference number: 5 (lower is better)
Translates to: EPGELRSLQLLFMWLMMLCESCL*SLYAHN
Trigger: ATTATGAGCATACAGGGACAACAAACAACTTTCACA...AAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATCTCCAAGTCTTTTGGTCAAATTAGAGCTGCCACCATGCACGAGGTTTTACTTTGTGAAAGTTGTTTGTaGTCCCTGTATGCTCATAAT +
Preference number: 5 (lower is better)
Translates to: ISKSFGQIRAATMHEVLLCESCL*SLYAHN
Trigger: ATTATGAGCATACAGGGACAACAAACAACTTTCACA...AAGTAAAACCTCGTGCATGGTGGCAGCTCTAATTTGACCAAAAGACTTGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TGTTCGGTAGCAGTTGAGCCCGGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGTGAAAGTTGTTTGTaGTCCCTGTATGCTCATAAT +
Preference number: 5 (lower is better)
Translates to: CSVAVEPGELRSLQLLFMCESCL*SLYAHN
Trigger: ATTATGAGCATACAGGGACAACAAACAACTTTCACA...CATAAATAACAGCTGTAAACTCCTTAATTCACCGGGCTCAACTGCTACCGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACTGGCAACATCTGACCTaGTCTGAATGTGAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHWQHLT*SECESC
Trigger: ACAACTTTCACATTCAGACAAGGTCAGATGTTGCCA...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp ATGTGGCTCATGATGCTTATTGAGCAATCTGCAAAAATAGATTTCCTGTCTCACCACTCATGGAGCCTTTaGTATTTGATCGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: MWLMMLIEQSAKIDFLSHHSWSL*YLIVLV
Trigger: CACTAAGACGATCAAATACAAAAGGCTCCATGAGTG...GTGAGACAGGAAATCTATTTTTGCAGATTGCTCAATAAGCATCATGAGCCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGTCTGTGAACTGGTTCTaGCTTCTTGTGCAGCTAACT +
Preference number: 5 (lower is better)
Translates to: GELRSLQLLFMWLMMLIESVNWF*LLVQLT
Trigger: AGTTAGCTGCACAAGAAGCAAGAACCAGTTCACAGA...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACAACTGTCTCTGGAAGTTaGGTCACAGTGCTTTATAAG +
Preference number: 5 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTTVSGS*VTVLYK
Trigger: CTTATAAAGCACTGTGACCAAACTTCCAGAGACAGT...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAACAAGAAACAGGAATCTaGAAACGGTTGATAAGATCA +
Preference number: 5 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLEQETGI*KRLIRS
Trigger: TGATCTTATCAACCGTTTCAAGATTCCTGTTTCTTG...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGCAGCAGCAAAGACCATaGCTAAAATTTCCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEQQQRP*LKFPVQ
Trigger: CTGAACTGGAAATTTTAGCAATGGTCTTTGCTGCTG...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp TTTACTGTCTCTGGAAGTTTGGTCACAGTGCTTTATAAGTCGCATAACCTGGAAAGAAGAGCCATAGCTTaGTGGAAAGTTGAGAATTTA +
Preference number: 5 (lower is better)
Translates to: FTVSGSLVTVLYKSHNLERRAIA*WKVENL
Trigger: TAAATTCTCAACTTTCCACAAAGCTATGGCTCTTCT...TTCCAGGTTATGCGACTTATAAAGCACTGTGACCAAACTTCCAGAGACAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp GCAGAAGCACTGGCCAAAAACTCTGATAAAAACTTGAGTGTATTTATTTGGCCATGCATGGATCCTCCTTaGCATGATTTAATTTATGGC +
Preference number: 5 (lower is better)
Translates to: AEALAKNSDKNLSVFIWPCMDPP*HDLIYG
Trigger: GCCATAAATTAAATCATGCAAAGGAGGATCCATGCA...TGGCCAAATAAATACACTCAAGTTTTTATCAGAGTTTTTGGCCAGTGCTTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTTTAAGTTGGTCTCCTTaGGGTTTCCCCCAATTTCTC +
Preference number: 5 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSLSWSP*GFPQFL
Trigger: GAGAAATTGGGGGAAACCCAAAGGAGACCAACTTAA...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTTGGAGCCTTTTGTATTaGATCGTCTTAGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSWSLLY*IVLVHQ
Trigger: CTGATGCACTAAGACGATCAAATACAAAAGGCTCCA...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp TTTTCAGCTTTAAGCAAAGGAAAGACTTTGCACATGCTCAGGCAAAACATGACAATATCAATTTTTAAGTaGGTCTCCTTTGGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: FSALSKGKTLHMLRQNMTISIFK*VSFGFP
Trigger: GGGAAACCCAAAGGAGACCAACTTAAAAATTGATAT...TGTCATGTTTTGCCTGAGCATGTGCAAAGTCTTTCCTTTGCTTAAAGCTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS GCA 90 bp ACCTGTATGAAGCATTATGTAATGCACAGTTTGAGTGACATCAGCTaGATGAATCAAATTGTGATATGGATTTTTGTACTTGCTGTAACC +
Preference number: 5 (lower is better)
Translates to: TCMKHYVMHSLSDIS*MNQIVIWIFVLAVT
Trigger: GGTTACAGCAAGTACAAAAATCCATATCACAATTTGATTCATGCAGCTGATGTCACTCAAACTGTGCATTACATAATGCTTCATACAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
ENST00000482538.5
CDS-3UTR CAA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGGGAATCTTGAAACGGTaGATAAGATCATATCTGGTA +
Preference number: 5 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEGILKR*IRSYLV
Trigger: TACCAGATATGATCTTATCAACCGTTTCAAGATTCC...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp GGTGAATTAAGGAGTTTACAGCTGTTATTTATGTGGCTCATGATGCTTATTGAGCAAGAAACAGGAATCTaGAAACGGTTGATAAGATCA +
Preference number: 5 (lower is better)
Translates to: GELRSLQLLFMWLMMLIEQETGI*KRLIRS
Trigger: TGATCTTATCAACCGTTTCAAGATTCCTGTTTCTTG...CTCAATAAGCATCATGAGCCACATAAATAACAGCTGTAAACTCCTTAATTCACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000410103.1
CDS-3UTR CAA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTGATTTGCTATTGACTTaGACAGGCATATATCCACTG +
Preference number: 5 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSDLLLT*TGIYPL
Trigger: CAGTGGATATATGCCTGTCAAAGTCAATAGCAAATC...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS-3UTR CAA 90 bp CAACATCTAATTGTGCTTGATCTTTCTTGTCAGCTAACAATGCATAAAGGTAGTTCTGAGGGCTGCAGTTaGTTTCTGTGTAGTAAAATA +
Preference number: 5 (lower is better)
Translates to: QHLIVLDLSCQLTMHKGSSEGCS*FLCSKI
Trigger: TATTTTACTACACAGAAACAAACTGCAGCCCTCAGA...ACTACCTTTATGCATTGTTAGCTGACAAGAAAGATCAAGCACAATTAGATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435564.5
CDS CCA 72 bp CAGTGTGTCCATAGAGGCCACATAAGACAGGCACGTTaGGGCACTCCCCCACAGAGCAGGGTGTGCAAAAAC +
Preference number: 6 (lower is better)
Translates to: QCVHRGHIRQAR*GTPPQSRVCKN
Trigger: GTTTTTGCACACCCTGCTCTGTGGGGGAGTGCCCCAACGTGCCTGTCTTATGTGGCCTCTATGGACACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000409365.5
CDS CAA 90 bp CACTCCCCCACAGAGCAGGGTGTGCAAAAACCACCAAGAGTCACGTaGATCCAGGCAAGAGAAGTGCACGGGACCCTCCGAAACAGAACA +
Preference number: 6 (lower is better)
Translates to: HSPTEQGVQKPPRVT*IQAREVHGTLRNRT
Trigger: TGTTCTGTTTCGGAGGGTCCCGTGCACTTCTCTTGCCTGGATCAACGTGACTCTTGGTGGTTTTTGCACACCCTGCTCTGTGGGGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000409365.5
CDS CAA 72 bp ACAGAGCAGGGTGTGCAAAAACCACCAAGAGTCACGTaGATCCAGGCAAGAGAAGTGCACGGGACCCTCCGA +
Preference number: 6 (lower is better)
Translates to: TEQGVQKPPRVT*IQAREVHGTLR
Trigger: TCGGAGGGTCCCGTGCACTTCTCTTGCCTGGATCAACGTGACTCTTGGTGGTTTTTGCACACCCTGCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000409365.5
CDS TCA 72 bp ACCGATAATGCAGCTTCCAGGATTTGGCTGGGTGGCTaGTGTCTGCTGCGTGGAGAATCAGGGACATGGTTT +
Preference number: 6 (lower is better)
Translates to: TDNAASRIWLGG*CLLRGESGTWF
Trigger: AAACCATGTCCCTGATTCTCCACGCAGCAGACATCAGCCACCCAGCCAAATCCTGGAAGCTGCATTATCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
CDS CCA 72 bp TATCTCCCTGCAGGAAAAACTCCTCCATTAGGGCCATaGTCCACCGATAATGCAGCTTCCAGGATTTGGCTG +
Preference number: 6 (lower is better)
Translates to: YLPAGKTPPLGP*STDNAASRIWL
Trigger: CAGCCAAATCCTGGAAGCTGCATTATCGGTGGACCATGGCCCTAATGGAGGAGTTTTTCCTGCAGGGAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
CDS CCA 72 bp GAAACTCTTCAGGTCCACTGCTGCAAGGGAGTAGTCTaGGGAATAGGACCCATCACTCATGGAGCCTTTTGT +
Preference number: 6 (lower is better)
Translates to: ETLQVHCCKGVV*GIGPITHGAFC
Trigger: ACAAAAGGCTCCATGAGTGATGGGTCCTATTCCCCAGACTACTCCCTTGCAGCAGTGGACCTGAAGAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
CDS CAA 90 bp CAAGGGAGTAGTCTGGGGAATAGGACCCATCACTCATGGAGCCTTTaGTATTTGATCGTCTTAGTGCATCAGCAATGTGTAACCCCACAA +
Preference number: 6 (lower is better)
Translates to: QGSSLGNRTHHSWSL*YLIVLVHQQCVTPQ
Trigger: TTGTGGGGTTACACATTGCTGATGCACTAAGACGATCAAATACAAAAGGCTCCATGAGTGATGGGTCCTATTCCCCAGACTACTCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
CDS CCA 72 bp CAAGGGAGTAGTCTGGGGAATAGGACCCATCACTCATaGAGCCTTTTGTATTTGATCGTCTTAGTGCATCAG +
Preference number: 6 (lower is better)
Translates to: QGSSLGNRTHHS*SLLYLIVLVHQ
Trigger: CTGATGCACTAAGACGATCAAATACAAAAGGCTCCATGAGTGATGGGTCCTATTCCCCAGACTACTCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
CDS GCA 72 bp TTTAAGTCGACGACGTTAACATCACCTCTTTCCAGCTaGTTCACCAAGCATCTTAGTATTCCTTTCAGGCGC +
Preference number: 6 (lower is better)
Translates to: FKSTTLTSPLSS*FTKHLSIPFRR
Trigger: GCGCCTGAAAGGAATACTAAGATGCTTGGTGAAGCAGCTGGAAAGAGGTGATGTTAACGTCGTCGACTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000410103.1
ENST00000435564.5
ENST00000482782.5
ENST00000495511.1
CDS CAA 72 bp GGGAATAGGACCCATCACTCATGGAGCCTTTTGTATTaGATCGTCTTAGTGCATCAGCAATGTGTAACCCCA +
Preference number: 6 (lower is better)
Translates to: GNRTHHSWSLLY*IVLVHQQCVTP
Trigger: TGGGGTTACACATTGCTGATGCACTAAGACGATCAAATACAAAAGGCTCCATGAGTGATGGGTCCTATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
CDS TCA 72 bp CCAGAAACTCCAGAGAGGAAATGTGGAAGCTTATCCTaGTCTATTGTGCTGCAAGGAGCCCAGAAAGAAAAA +
Preference number: 6 (lower is better)
Translates to: PETPERKCGSLS*SIVLQGAQKEK
Trigger: TTTTTCTTTCTGGGCTCCTTGCAGCACAATAGATCAGGATAAGCTTCCACATTTCCTCTCTGGAGTTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000409365.5
CDS CAA 72 bp AGTCTGGGGAATAGGACCCATCACTCATGGAGCCTTTaGTATTTGATCGTCTTAGTGCATCAGCAATGTGTA +
Preference number: 6 (lower is better)
Translates to: SLGNRTHHSWSL*YLIVLVHQQCV
Trigger: TACACATTGCTGATGCACTAAGACGATCAAATACAAAAGGCTCCATGAGTGATGGGTCCTATTCCCCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
CDS GCA 72 bp TTTAAGTCGACGACGTTAACATCACCTCTTTCCAGCTaGTTCACCAAGCATCTTAGTCTAAAGATGGGTCTT +
Preference number: 6 (lower is better)
Translates to: FKSTTLTSPLSS*FTKHLSLKMGL
Trigger: AAGACCCATCTTTAGACTAAGATGCTTGGTGAAGCAGCTGGAAAGAGGTGATGTTAACGTCGTCGACTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351439.9
ENST00000409365.5
CDS TCA 72 bp TACCTGTATGAAGCATTATGTAATGCACAGTTTGAGTaGCATCAGCTGCATGAATCAAATTGTGATATGGAT +
Preference number: 6 (lower is better)
Translates to: YLYEALCNAQFE*HQLHESNCDMD
Trigger: ATCCATATCACAATTTGATTCATGCAGCTGATGTCACTCAAACTGTGCATTACATAATGCTTCATACAGGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351439.9
ENST00000358139.6
ENST00000409365.5
ENST00000410103.1
ENST00000435564.5
ENST00000482538.5