RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE11A (Homo sapiens)

Ensembl gene IDs: ENSG00000128655, ENSG00000284741

Ensembl transcript IDs: ENST00000286063.11, ENST00000358450.8, ENST00000389683.7, ENST00000409504.5, ENST00000427127.1, ENST00000433879.1, ENST00000436700.5, ENST00000466790.1, ENST00000478646.5, ENST00000488399.5, ENST00000492761.1, ENST00000497003.5

Found 739 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCTGGTCGCCCAGGCTGGAGGGCAGTGACGTGATCTCGACTCACTaGAAGCTCCGCCTCGCGGGTTCCCGCCATTCTCTTGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: RWSPRLEGSDVISTH*KLRLAGSRHSLASA
Trigger: GGCTGAGGCAAGAGAATGGCGGGAACCCGCGAGGCGGAGCTTGCAGTGAGTCGAGATCACGTCACTGCCCTCCAGCCTGGGCGACCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 90 bp CGGAGCTGCAGACACGTCACGATCTCGCAGACCAGACTCTGTCCCTaGCTCCACCCACCCTTTGTTCCCCACCTGAAGGAGGAGAGACAG +
Preference number: 1 (lower is better)
Translates to: RSCRHVTISQTRLCP*LHPPFVPHLKEERQ
Trigger: CTGTCTCTCCTCCTTCAGGTGGGGAACAAAGGGTGGGTGGAGTCAGGGACAGAGTCTGGTCTGCGAGATCGTGACGTGTCTGCAGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 90 bp TCAGCTGGTGGCCAAGCTAGGAGGGAGTTCCAGTCTGCTATGCACTaGATGGCACCCTTTGCAGTATGTGAAGCTGTCCCTACCCACCAG +
Preference number: 1 (lower is better)
Translates to: SAGGQARREFQSAMH*MAPFAVCEAVPTHQ
Trigger: CTGGTGGGTAGGGACAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCCTAGCTTGGCCACCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR GCA 90 bp CAGGTTCAGCTGGTGGCCAAGCTAGGAGGGAGTTCCAGTCTGCTATaGACTGAATGGCACCCTTTGCAGTATGTGAAGCTGTCCCTACCC +
Preference number: 1 (lower is better)
Translates to: QVQLVAKLGGSSSLL*TEWHPLQYVKLSLP
Trigger: GGGTAGGGACAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCCTAGCTTGGCCACCAGCTGAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR GCA 90 bp CCTCTGGGGTTGTTGGCACCAGGAAGCTGCTACCTTCCTGTCCACTaGTTCATAGTCATGGAGACACAGACCCATGGCATTAGTCAGCAG +
Preference number: 1 (lower is better)
Translates to: PLGLLAPGSCYLPVH*FIVMETQTHGISQQ
Trigger: CTGCTGACTAATGCCATGGGTCTGTGTCTCCATGACTATGAAGCAGTGGACAGGAAGGTAGCAGCTTCCTGGTGCCAACAACCCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR CCA 90 bp CTGGTGGCCAAGCTAGGAGGGAGTTCCAGTCTGCTATGCACTGAATaGCACCCTTTGCAGTATGTGAAGCTGTCCCTACCCACCAGGATT +
Preference number: 1 (lower is better)
Translates to: LVAKLGGSSSLLCTE*HPLQYVKLSLPTRI
Trigger: AATCCTGGTGGGTAGGGACAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCCTAGCTTGGCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 90 bp TTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTaGAAGCCCAGGCATGCTTCCCAGTGCATCCTTGAGATGTTAGGT +
Preference number: 1 (lower is better)
Translates to: FVLPVALSAADHASR*KPRHASQCILEMLG
Trigger: ACCTAACATCTCAAGGATGCACTGGGAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
3UTR CCA 90 bp GGATTAAAAACGCCTGAAACCCGCAAGAGTTCAACCTCTAACCTCTaGGGTTGTTGGCACCAGGAAGCTGCTACCTTCCTGTCCACTGCT +
Preference number: 1 (lower is better)
Translates to: GLKTPETRKSSTSNL*GCWHQEAATFLSTA
Trigger: AGCAGTGGACAGGAAGGTAGCAGCTTCCTGGTGCCAACAACCCCAGAGGTTAGAGGTTGAACTCTTGCGGGTTTCAGGCGTTTTTAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 90 bp GTTGACATTGTCAGGGCTCCACTGTATGGCAGATTGCAATGGTGTTaGACTCCCCTTGCTACCAGTGGATGTTGCTATTGGCAACCATGC +
Preference number: 1 (lower is better)
Translates to: VDIVRAPLYGRLQWC*TPLATSGCCYWQPC
Trigger: GCATGGTTGCCAATAGCAACATCCACTGGTAGCAAGGGGAGTTCAACACCATTGCAATCTGCCATACAGTGGAGCCCTGACAATGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 90 bp GGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTaGAGCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTG +
Preference number: 1 (lower is better)
Translates to: GVPVCYALNGTLCSM*SCPYPPGLPLHCRL
Trigger: CAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR GCA 90 bp ATGGCACCCTTTGCAGTATGTGAAGCTGTCCCTACCCACCAGGATTaGCACTACATTGTAGATTGTGCACATAATAGCTACATAGTGACT +
Preference number: 1 (lower is better)
Translates to: MAPFAVCEAVPTHQD*HYIVDCAHNSYIVT
Trigger: AGTCACTATGTAGCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGCTTCACATACTGCAAAGGGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR CCA 90 bp AGGTTTAATCTAGGCCAGGGATTTTCAAACTCTTCAGAGTCCCTGTaGACCCCCATGTACGTAATCAAAGAGATGAAGGTTTGTAGGTGC +
Preference number: 1 (lower is better)
Translates to: RFNLGQGFSNSSESL*TPMYVIKEMKVCRC
Trigger: GCACCTACAAACCTTCATCTCTTTGATTACGTACATGGGGGTCCACAGGGACTCTGAAGAGTTTGAAAATCCCTGGCCTAGATTAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 90 bp TTGGGGAGGATAACAGATGTGGGCTCATCTCTGCCTCACACAGACTaGTTTTCAATTCCCGTTCGTGATATAAACATGATGTGGCACATT +
Preference number: 1 (lower is better)
Translates to: LGRITDVGSSLPHTD*FSIPVRDINMMWHI
Trigger: AATGTGCCACATCATGTTTATATCACGAACGGGAATTGAAAATCAGTCTGTGTGAGGCAGAGATGAGCCCACATCTGTTATCCTCCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR CCA 90 bp ATAAAATACCTCTATGGAATACAAATTAGGATTCTTGGGACAGTCTaGCACAAAAAGGCATTCAGGGACAGGAAGCAAAGACAGGCAGTG +
Preference number: 1 (lower is better)
Translates to: IKYLYGIQIRILGTV*HKKAFRDRKQRQAV
Trigger: CACTGCCTGTCTTTGCTTCCTGTCCCTGAATGCCTTTTTGTGCCAGACTGTCCCAAGAATCCTAATTTGTATTCCATAGAGGTATTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR GCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTaGTATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGA +
Preference number: 1 (lower is better)
Translates to: KGYHSPSLELPIKHI*YSPTMYSFLGGELG
Trigger: TCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR CCA 90 bp AATAAAAGTCAGTGCTTTTATGTAATAGATGGAGATTCTAAGACTTaGAGAGTCCTAAGATTACAGGTTCAGCTGGTGGCCAAGCTAGGA +
Preference number: 1 (lower is better)
Translates to: NKSQCFYVIDGDSKT*RVLRLQVQLVAKLG
Trigger: TCCTAGCTTGGCCACCAGCTGAACCTGTAATCTTAGGACTCTCCAAGTCTTAGAATCTCCATCTATTACATAAAAGCACTGACTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR CAA 90 bp AAGCTAGGAGGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTaGCAGTATGTGAAGCTGTCCCTACCCACCAGGATTGCCACTACA +
Preference number: 2 (lower is better)
Translates to: KLGGSSSLLCTEWHP*QYVKLSLPTRIATT
Trigger: TGTAGTGGCAATCCTGGTGGGTAGGGACAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCCTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR TCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTGACCATGCTTCAAGGTaGAAGCCCAGGCATGCTTCC +
Preference number: 2 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSDHASR*KPRHAS
Trigger: GGAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTC...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR GCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAAGAGGGTCCTGGGGTGTaGTCCCTGCCCCACCTCTTT +
Preference number: 2 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKEGPGV*SLPHLF
Trigger: AAAGAGGTGGGGCAGGGAGCACACCCCAGGACCCTC...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR GCA 90 bp GGAGGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTGAAGGAGGCAGTTTCTTCCTaGATTCATTTCCCCCTCTAC +
Preference number: 2 (lower is better)
Translates to: GGSSSLLCTEWHPLQYVKEAVSS*IHFPLY
Trigger: GTAGAGGGGGAAATGAATGCAGGAAGAAACTGCCTC...CTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR CCA 90 bp GGAGGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTGAAGAGTGGATGTTGCTATTaGCAACCATGCAGTGAAGCC +
Preference number: 2 (lower is better)
Translates to: GGSSSLLCTEWHPLQYVKSGCCY*QPCSEA
Trigger: GGCTTCACTGCATGGTTGCCAATAGCAACATCCACT...CTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR TCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTATGACATTGCTGGACTaGAAATGGCCCTTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSMTLLD*KWPFRL
Trigger: CAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTCAT...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR GCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGAGGCATGCTTCCCAGTaGATCCTTGAGATGTTAGGT +
Preference number: 2 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRRHASQ*ILEMLG
Trigger: ACCTAACATCTCAAGGATGCACTGGGAAGCATGCCT...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
3UTR-3UTR GCA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCGAGGGTCCTGGGGTGTaGTCCCTGCCCCACCTCTTT +
Preference number: 2 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVEGPGV*SLPHLF
Trigger: AAAGAGGTGGGGCAGGGAGCACACCCCAGGACCCTC...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR-3UTR GCA 90 bp CCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTACATAGCAGTGCTTCGGAGCTaGAGACACGTCACGATCTCG +
Preference number: 2 (lower is better)
Translates to: PTHQDCHYIVDCAHNSYIAVLRS*RHVTIS
Trigger: CGAGATCGTGACGTGTCTGCAGCTCCGAAGCACTGC...TATGTAGCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR CCA 90 bp GGAGGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTGAAGGTCTCTGTCAGACCCTaGGTCCAGTTTTGTCATAAA +
Preference number: 2 (lower is better)
Translates to: GGSSSLLCTEWHPLQYVKVSVRP*VQFCHK
Trigger: TTTATGACAAAACTGGACCCAGGGTCTGACAGAGAC...CTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR GCA 90 bp TCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGTTAGGCATGCTTCCCAGTaGATCCTTGAGATGTTAGGT +
Preference number: 2 (lower is better)
Translates to: SLNHLSRSLSFLYWCSYVRHASQ*ILEMLG
Trigger: ACCTAACATCTCAAGGATGCACTGGGAAGCATGCCT...AACGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR GCA 90 bp CCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTACATACCAGGAAGCAGAGGTTaGAGTAAGCCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: PTHQDCHYIVDCAHNSYIPGSRG*SKPRSR
Trigger: GCGTGATCTCGGCTTACTGCAACCTCTGCTTCCTGG...TATGTAGCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR TCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGATGACATTGCTGGACTaGAAATGGCCCTTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: ASQCILEMLGLSELKEQKMTLLD*KWPFRL
Trigger: CAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTCAT...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
3UTR-3UTR TCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTGACCATGCTTCAAGGTaGAAGCCCAGGCATGCTTCC +
Preference number: 2 (lower is better)
Translates to: KGYHSPSLELPIKHICYSDHASR*KPRHAS
Trigger: GGAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTC...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR TCA 90 bp TCAACCTTAGTGGAAGCTTGTAGGGTTTATGCTATAAATTATGTTCCCCTTAGCACCAGACTCTGTCCCTaGCTCCACCCACCCTTTGTT +
Preference number: 2 (lower is better)
Translates to: STLVEACRVYAINYVPLSTRLCP*LHPPFV
Trigger: AACAAAGGGTGGGTGGAGTCAGGGACAGAGTCTGGT...GCTAAGGGGAACATAATTTATAGCATAAACCCTACAAGCTTCCACTAAGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR TCA 90 bp GCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTTCAATTCCCGTTCGTaGTATAAACATGATGTGGCA +
Preference number: 2 (lower is better)
Translates to: AVPTHQDCHYIVDCAHNSFNSRS*YKHDVA
Trigger: TGCCACATCATGTTTATATCACGAACGGGAATTGAA...GCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR CAA 90 bp CAAGACAGGAGAAATAGATGGAGGCAATTACAAACAGCTACTAGATaGATGGTTGACATTGTCAGGGCTCCACTGTATGGCAGATTGCAA +
Preference number: 2 (lower is better)
Translates to: QDRRNRWRQLQTATR*MVDIVRAPLYGRLQ
Trigger: TTGCAATCTGCCATACAGTGGAGCCCTGACAATGTCAACCATCAATCTAGTAGCTGTTTGTAATTGCCTCCATCTATTTCTCCTGTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR TCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTGATGTTAGGTCTTTCTaGGCTAAAAGAACAAAAGGA +
Preference number: 2 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSDVRSF*AKRTKG
Trigger: TCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATC...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR TCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTTGCTCTCTCTGCTGCTaGCCATGCTTCAAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: KGYHSPSLELPIKHICYSCSLCC*PCFKVK
Trigger: TTTCACCTTGAAGCATGGTCAGCAGCAGAGAGAGCA...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR TCA 90 bp CAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGTCTGTAATGAAGGTTTGCTCTCTCTGCTGCTaGCCATGCTTCAAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: QNLSIHSFWEKTLSVMKVCSLCC*PCFKVK
Trigger: TTTCACCTTGAAGCATGGTCAGCAGCAGAGAGAGCA...AACCTTCATTACAGACAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR CCA 90 bp AGTTTATTCTTACCTATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTGCCTGTCCACAGGTCCTTaGATCCAAAACAGTCCCCTA +
Preference number: 2 (lower is better)
Translates to: SLFLPIVNLASYRICVLCLSTGP*IQNSPL
Trigger: TAGGGGACTGTTTTGGATCCAAGGACCTGTGGACAG...GCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAATAGGTAAGAATAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR-3UTR GCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGAGGCATGCTTCCCAGTaGATCCTTGAGATGTTAGGT +
Preference number: 2 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLRHASQ*ILEMLG
Trigger: ACCTAACATCTCAAGGATGCACTGGGAAGCATGCCT...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR TCA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCGGGGAGAACTGGGATTaGTCAGTATTTATAAGGATA +
Preference number: 2 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFGENWD*SVFIRI
Trigger: TATCCTTATAAATACTGATCAATCCCAGTTCTCCCC...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR-3UTR CCA 90 bp TCAAAGAGGTCATTAACCACCTCTAGCAAAGCAAAGCAGCTTTTCCTCACTATCGAAGAAACAGGTTCTTaGTCAAACTTGAGACATTTT +
Preference number: 2 (lower is better)
Translates to: SKRSLTTSSKAKQLFLTIEETGS*SNLRHF
Trigger: AAAATGTCTCAAGTTTGACCAAGAACCTGTTTCTTC...GATAGTGAGGAAAAGCTGCTTTGCTTTGCTAGAGGTGGTTAATGACCTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
3UTR-3UTR TCA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCGGGGAGAACTGGGATTaGTCAGTATTTATAAGGATA +
Preference number: 2 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSGENWD*SVFIRI
Trigger: TATCCTTATAAATACTGATCAATCCCAGTTCTCCCC...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR GCA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCCTTCATTTCAGCCCATaGGTGTTCATTAGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSLHFSP*VFIREK
Trigger: CTTTTCCCTAATGAACACGCATGGGCTGAAATGAAG...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR GCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGGACCCCTATAGTTTaGTTTAAGTTGGTTACTGGT +
Preference number: 2 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFGTPIV*FKLVTG
Trigger: ACCAGTAACCAACTTAAAGCAAACTATAGGGGTCCC...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR-3UTR GCA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCCCCATCAAACACATTTaGTATAGTCCTACTATGTAT +
Preference number: 2 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFPIKHI*YSPTMY
Trigger: ATACATAGTAGGACTATAGCAAATGTGTTTGATGGG...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR GCA 72 bp CCCAGGCTGGAGGGCAGTGACGTGATCTCGACTCACTaGAAGCTCCGCCTCGCGGGTTCCCGCCATTCTCTT +
Preference number: 3 (lower is better)
Translates to: PRLEGSDVISTH*KLRLAGSRHSL
Trigger: AAGAGAATGGCGGGAACCCGCGAGGCGGAGCTTGCAGTGAGTCGAGATCACGTCACTGCCCTCCAGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 72 bp CCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTaGAAGCCCAGGCATGCTTCCCAGTGCATCCTTGAG +
Preference number: 3 (lower is better)
Translates to: PVALSAADHASR*KPRHASQCILE
Trigger: CTCAAGGATGCACTGGGAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
3UTR GCA 72 bp GCACATTACCCAGAAACACCTGCAGTGCTTCGGAGCTaGAGACACGTCACGATCTCGCAGACCAGACTCTGT +
Preference number: 3 (lower is better)
Translates to: AHYPETPAVLRS*RHVTISQTRLC
Trigger: ACAGAGTCTGGTCTGCGAGATCGTGACGTGTCTGCAGCTCCGAAGCACTGCAGGTGTTTCTGGGTAATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 72 bp GGCCAAGCTAGGAGGGAGTTCCAGTCTGCTATGCACTaGATGGCACCCTTTGCAGTATGTGAAGCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: GQARREFQSAMH*MAPFAVCEAVP
Trigger: AGGGACAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCCTAGCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR GCA 72 bp CTGGTGGCCAAGCTAGGAGGGAGTTCCAGTCTGCTATaGACTGAATGGCACCCTTTGCAGTATGTGAAGCTG +
Preference number: 3 (lower is better)
Translates to: LVAKLGGSSSLL*TEWHPLQYVKL
Trigger: CAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCCTAGCTTGGCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 72 bp CTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTaGCCATGCTTCAAGGTGAAAGCCCAGGCATGCTTC +
Preference number: 3 (lower is better)
Translates to: LFLCPSRCSLCC*PCFKVKAQACF
Trigger: GAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
3UTR GCA 72 bp TCAATGTTCAGGATAGCTACAGTGCTCACGGCAGCCTaGAGTCTCTGTCAGACCCTGGGTCCAGTTTTGTCA +
Preference number: 3 (lower is better)
Translates to: SMFRIATVLTAA*SLCQTLGPVLS
Trigger: TGACAAAACTGGACCCAGGGTCTGACAGAGACTGCAGGCTGCCGTGAGCACTGTAGCTATCCTGAACATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR CCA 72 bp AAGCTAGGAGGGAGTTCCAGTCTGCTATGCACTGAATaGCACCCTTTGCAGTATGTGAAGCTGTCCCTACCC +
Preference number: 3 (lower is better)
Translates to: KLGGSSSLLCTE*HPLQYVKLSLP
Trigger: GGGTAGGGACAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCCTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 72 bp GTCAGGGCTCCACTGTATGGCAGATTGCAATGGTGTTaGACTCCCCTTGCTACCAGTGGATGTTGCTATTGG +
Preference number: 3 (lower is better)
Translates to: VRAPLYGRLQWC*TPLATSGCCYW
Trigger: CCAATAGCAACATCCACTGGTAGCAAGGGGAGTTCAACACCATTGCAATCTGCCATACAGTGGAGCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR TCA 72 bp GTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTaGAGCTGTCCCTACCCACCAGGATTGCCACTACAT +
Preference number: 3 (lower is better)
Translates to: VCYALNGTLCSM*SCPYPPGLPLH
Trigger: ATGTAGTGGCAATCCTGGTGGGTAGGGACAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR GCA 72 bp CCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATaGTTAGTCTCCATGGCTCTGCTCTGTCCTGTGAAC +
Preference number: 3 (lower is better)
Translates to: PELLTRRTQGSQ*LVSMALLCPVN
Trigger: GTTCACAGGACAGAGCAGAGCCATGGAGACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR GCA 72 bp TGGTTGACATTGTCAGGGCTCCACTGTATGGCAGATTaGAATGGTGTTGAACTCCCCTTGCTACCAGTGGAT +
Preference number: 3 (lower is better)
Translates to: WLTLSGLHCMAD*NGVELPLLPVD
Trigger: ATCCACTGGTAGCAAGGGGAGTTCAACACCATTGCAATCTGCCATACAGTGGAGCCCTGACAATGTCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR CAA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAACTGTCCACAGGTCCTaGGATCCAAAACAGTCCCCT +
Preference number: 3 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALTVHRS*DPKQSP
Trigger: AGGGGACTGTTTTGGATCCAAGGACCTGTGGACAGT...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR GCA 72 bp ACTGTATGGCAGATTGCAATGGTGTTGAACTCCCCTTaGTACCAGTGGATGTTGCTATTGGCAACCATGCAG +
Preference number: 3 (lower is better)
Translates to: TVWQIAMVLNSP*YQWMLLLATMQ
Trigger: CTGCATGGTTGCCAATAGCAACATCCACTGGTAGCAAGGGGAGTTCAACACCATTGCAATCTGCCATACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR CAA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCACAGGCTGTAGTCATTTaGCAGCTGCAGCTGACCTGG +
Preference number: 3 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSQAVVI*QLQLTW
Trigger: CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTG...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR GCA 72 bp TTCCTTCTTCAGACATTTCCTGAATTGTCTACTGTGTaGCAGGAAAACAATGTCGCATGTAGAACATGGCCC +
Preference number: 3 (lower is better)
Translates to: FLLQTFPELSTV*QENNVACRTWP
Trigger: GGGCCATGTTCTACATGCGACATTGTTTTCCTGGCACACAGTAGACAATTCAGGAAATGTCTGAAGAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR GCA 72 bp TTTGCAGTATGTGAAGCTGTCCCTACCCACCAGGATTaGCACTACATTGTAGATTGTGCACATAATAGCTAC +
Preference number: 3 (lower is better)
Translates to: FAVCEAVPTHQD*HYIVDCAHNSY
Trigger: GTAGCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGCTTCACATACTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR CCA 72 bp CTCTATGGAATACAAATTAGGATTCTTGGGACAGTCTaGCACAAAAAGGCATTCAGGGACAGGAAGCAAAGA +
Preference number: 3 (lower is better)
Translates to: LYGIQIRILGTV*HKKAFRDRKQR
Trigger: TCTTTGCTTCCTGTCCCTGAATGCCTTTTTGTGCCAGACTGTCCCAAGAATCCTAATTTGTATTCCATAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR CCA 72 bp CAGTGCTTTTATGTAATAGATGGAGATTCTAAGACTTaGAGAGTCCTAAGATTACAGGTTCAGCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: QCFYVIDGDSKT*RVLRLQVQLVA
Trigger: GGCCACCAGCTGAACCTGTAATCTTAGGACTCTCCAAGTCTTAGAATCTCCATCTATTACATAAAAGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR CAA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGACTGTCCACAGGTCCTaGGATCCAAAACAGTCCCCT +
Preference number: 3 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLTVHRS*DPKQSP
Trigger: AGGGGACTGTTTTGGATCCAAGGACCTGTGGACAGT...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR TCA 72 bp ATAACAGATGTGGGCTCATCTCTGCCTCACACAGACTaGTTTTCAATTCCCGTTCGTGATATAAACATGATG +
Preference number: 3 (lower is better)
Translates to: ITDVGSSLPHTD*FSIPVRDINMM
Trigger: CATCATGTTTATATCACGAACGGGAATTGAAAATCAGTCTGTGTGAGGCAGAGATGAGCCCACATCTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR GCA 72 bp CCCATGTACGTAATCAAAGAGATGAAGGTTTGTAGGTaGTCTGGATGTCCAAACCCTGCTTATAATTCACAT +
Preference number: 3 (lower is better)
Translates to: PMYVIKEMKVCR*SGCPNPAYNSH
Trigger: ATGTGAATTATAAGCAGGGTTTGGACATCCAGAGCACCTACAAACCTTCATCTCTTTGATTACGTACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR-3UTR CAA 90 bp TCAAAGAGGTCATTAACCACCTCTAGCAAAGCAAAGCAGCTTTTCCTCACTATCGGAAGAAACAGGTTCTaGGTCAAACTTGAGACATTT +
Preference number: 3 (lower is better)
Translates to: SKRSLTTSSKAKQLFLTIGRNRF*VKLETF
Trigger: AAATGTCTCAAGTTTGACCAAGAACCTGTTTCTTCC...GATAGTGAGGAAAAGCTGCTTTGCTTTGCTAGAGGTGGTTAATGACCTCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
3UTR-3UTR CAA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTGGGGGAGAACTGGGATaGATCAGTATTTATAAGGAT +
Preference number: 3 (lower is better)
Translates to: KGYHSPSLELPIKHICYSGGELG*ISIYKD
Trigger: ATCCTTATAAATACTGATCAATCCCAGTTCTCCCCC...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
3UTR-3UTR CAA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCTACAAATTAGGATTCTaGGGACAGTCTGGCACAAAA +
Preference number: 3 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVYKLGF*GQSGTK
Trigger: TTTTGTGCCAGACTGTCCCAAGAATCCTAATTTGTA...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR-3UTR CAA 90 bp AGTTTATTCTTACCTATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTGCGGGGGAGAACTGGGATaGATCAGTATTTATAAGGAT +
Preference number: 3 (lower is better)
Translates to: SLFLPIVNLASYRICVLCGGELG*ISIYKD
Trigger: ATCCTTATAAATACTGATCAATCCCAGTTCTCCCCC...GCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAATAGGTAAGAATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR-3UTR CAA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTCTGGGAGAAAACTTaGTCTGTAATGAAGGTTGAA +
Preference number: 3 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFFWEKT*SVMKVE
Trigger: TTCAACCTTCATTACAGACAAAGTTTTCTCCCAGAA...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR-3UTR CAA 90 bp AGTTTATTCTTACCTATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTGCAAAGACAGGCAGTGTTaGGCTTGTAACAAACAGAAA +
Preference number: 3 (lower is better)
Translates to: SLFLPIVNLASYRICVLCKDRQC*ACNKQK
Trigger: TTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTT...GCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAATAGGTAAGAATAAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
3UTR GCA 72 bp ATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTaGCCAGACTGTTATTTCTTAACATTTGAAGCATTG +
Preference number: 3 (lower is better)
Translates to: IVNLASYRICVL*PDCYFLTFEAL
Trigger: CAATGCTTCAAATGTTAAGAAATAACAGTCTGGGCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTTGCCCAGCACTGAGCTaGCGCCGCTGCCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGCPALS*RRCPGS
Trigger: GGAGCCGGGGCAGCGGCGGCAGCTCAGTGCTGGGCA...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGTCCAGGCGGGAGGCTaGCATGGTCCCAGACAGCTT +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHVQAGG*HGPRQL
Trigger: AAGCTGTCTGGGACCATGGCAGCCTCCCGCCTGGAC...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp TTTCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGACAGGTGCCCAGCACTaGGCTGCCGCCGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FPLTTCLGPCLSFTGVLTTGAQH*AAAAAP
Trigger: CGGGGCAGCGGCGGCAGCTCAGTGCTGGGCACCTGT...CGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAACCCACCCCGTGGTCCTaGTACTCCTGCTCCGCACAG +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQPTPWS*YSCSAQ
Trigger: CTGTGCGGAGCAGGAGTAGCAGGACCACGGGGTGGG...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GGAGGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTGAAGTCGCTGCTCCTGTTCTaGCTGCCGCCGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGSSSLLCTEWHPLQYVKSLLLF*LPPLLL
Trigger: CAGCAGCAGCGGCGGCAGCCAGAACAGGAGCAGCGA...CTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGTGCCCCTTCCTTCTCTaGCTCAGAGTGGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: GLKMALQAVVILQLQLTWCPFLL*LRVAGA
Trigger: GGCGCCAGCCACTCTGAGCCAGAGAAGGAAGGGGCA...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp TCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGTTCCTGCTCCGCACAGGTaGCCAGCACTGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SLNHLSRSLSFLYWCSYVPAPHR*PALSCR
Trigger: GCGGCAGCTCAGTGCTGGGCACCTGTGCGGAGCAGG...AACGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGCGCTGCTGCCACCTCTaGAGGTGCTGTGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRRCCHL*RCCEPS
Trigger: GCTTGGCTCACAGCACCTGCAGAGGTGGCAGCAGCG...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACGAGGGTCCTGGGGTGTaGTCCCTGCCCCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHEGPGV*SLPHLF
Trigger: AAAGAGGTGGGGCAGGGAGCACACCCCAGGACCCTC...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCGTGCTCACGGCAGCCTaGAGTCTCTGTCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTVLTAA*SLCQTL
Trigger: CAGGGTCTGACAGAGACTGCAGGCTGCCGTGAGCAC...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATTGGAGAGGTCAAGGCTaGAGTGGCTGTGATTGTGCC +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHWRGQG*SGCDCA
Trigger: GGCACAATCACAGCCACTGCAGCCTTGACCTCTCCA...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTGCCGACCCCACCCCGTaGTCCTGCTACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSADPTP*SCYSCS
Trigger: GGAGCAGGAGTAGCAGGACCACGGGGTGGGGTCGGC...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATCCCAGCAGTGGAATCTaGGAGATGCCCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHPSSGI*EMPLPS
Trigger: AGAAGGAAGGGGCATCTCCCAGATTCCACTGCTGGG...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GGAGGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTGAAGCCACCGGGAAGGGGCTaGCTGTGGGCAGAGCCATTT +
Preference number: 4 (lower is better)
Translates to: GGSSSLLCTEWHPLQYVKPPGRG*LWAEPF
Trigger: AAATGGCTCTGCCCACAGCCAGCCCCTTCCCGGTGG...CTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATAGATCTCCCACGGTTTaGTCACGGCTCCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHRSPTV*SRLQGH
Trigger: GTGACCTTGGAGCCGTGACCAAACCGTGGGAGATCT...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGTTCTGCCACCTGTCTaGAGATCTCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHVLPPV*RSPTVW
Trigger: CCAAACCGTGGGAGATCTCCAGACAGGTGGCAGAAC...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR TCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGCCATCCCCAGCTCCATaGACATCCGGAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRPSPAP*TSGEQL
Trigger: CAGCTGCTCTCCGGATGTTCATGGAGCTGGGGATGG...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTTCTGGCTGCCGCCGCTaGTGCTGGAACTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAASGCRR*CWNCCC
Trigger: ACAGCAGCAGTTCCAGCAGCAGCGGCGGCAGCCAGA...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGGCAGTGCTTCGGAGCTaGAGACACGTCACGATCTCG +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRAVLRS*RHVTIS
Trigger: CGAGATCGTGACGTGTCTGCAGCTCCGAAGCACTGC...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGTTTTCTCTGGCTCAGAGTaGCTGGCGCCGACCCCACCC +
Preference number: 4 (lower is better)
Translates to: SLNHLSRSLSFLYWCSYVFSGSE*LAPTPP
Trigger: GGGTGGGGTCGGCGCCAGCCACTCTGAGCCAGAGAA...AACGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGTGTGAGCCAAGCTGCTaGTACCAGCCAAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRCEPSC*YQPKRA
Trigger: GGCCCTCTTTGGCTGGTACCAGCAGCTTGGCTCACA...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTGGAAGGGGCTGGCTGTaGGCAGAGCCATTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPGRGWL*AEPFGP
Trigger: TGGACCAAATGGCTCTGCCCACAGCCAGCCCCTTCC...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTCCGGAGAGCAGCTGTaGTCATGGCATCAACGTCGA +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTSGEQL*SWHQRR
Trigger: TCGACGTTGATGCCATGATCACAGCTGCTCTCCGGA...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTCCATCCCCAGCTCCATaGACATCCGGAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAAPSPAP*TSGEQL
Trigger: CAGCTGCTCTCCGGATGTTCATGGAGCTGGGGATGG...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATTCAGCTGACACACGTTaGAGGCATGTCTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHSADTR*RHVSSC
Trigger: ACAACTGGAGACATGCCTTCAACGTGTGTCAGCTGA...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGCTGTGGTCGAGGTCATaGCACAGGCATCCCACAATC +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRLWSRS*HRHPTI
Trigger: GATTGTGGGATGCCTGTGTCATGACCTCGACCACAG...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAGTTTCACGTTaGCCTTCACCAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHASVSR*PSPVPD
Trigger: ATCAGGCACTGGTGAAGGTCAACGTGAAACTGAAGC...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR TCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATATGACATTGCTGGACTaGAAATGGCCCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHMTLLD*KWPFRL
Trigger: CAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTCAT...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR TCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCACCAGACTCTGTCCCTaGCTCCACCCACCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTTRLCP*LHPPFV
Trigger: AACAAAGGGTGGGTGGAGTCAGGGACAGAGTCTGGT...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp TTTCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGGGCTGCCGCCGCTGCTaGTGGAACTGCTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: FPLTTCLGPCLSFTGVLTGCRRC*WNCCCN
Trigger: GTTACAGCAGCAGTTCCAGCAGCAGCGGCGGCAGCC...CGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTGCTCCTGTTCTGGCTaGCGCCGCTGCTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: AVPTHQDCHYIVDCAHNSCSCSG*RRCCWN
Trigger: GTTCCAGCAGCAGCGGCGGCAGCCAGAACAGGAGCA...GCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTGGTCCTGCTACTCCTaGTCCGCACAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AVPTHQDCHYIVDCAHNSWSCYS*SAQVPS
Trigger: GCTGGGCACCTGTGCGGAGCAGGAGTAGCAGGACCA...GCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTTGCCACCACCAACGCTaGTGCCACCTCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSCHHQR*CHLCRC
Trigger: GCACCTGCAGAGGTGGCAGCAGCGTTGGTGGTGGCA...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGAGCCACTCTTAGCTTaGAAGGCATTGTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHEPLLA*KALLVP
Trigger: GGGAACCAACAATGCCTTCCAAGCTAAGAGTGGCTC...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCGTTCTGCCACCTGTCTaGAGATCTCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTVLPPV*RSPTVW
Trigger: CCAAACCGTGGGAGATCTCCAGACAGGTGGCAGAAC...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CCA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGCCTCAACTTCGAGGCTaGCGATCCAGAAAGAGCACC +
Preference number: 4 (lower is better)
Translates to: GLKMALQAVVILQLQLTWPQLRG*RSRKST
Trigger: GGTGCTCTTTCTGGATCGCCAGCCTCGAAGTTGAGG...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS-3UTR TCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCCTGGTAGGCATCACTaGTGTTCACTGGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADPGRHH*CSLEGL
Trigger: CAGGCCTTCCAGTGAACATCAGTGATGCCTACCAGG...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACCCTGGTAGGCATCACTaGTGTTCACTGGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHPGRHH*CSLEGL
Trigger: CAGGCCTTCCAGTGAACATCAGTGATGCCTACCAGG...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp GGAGGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTGAAGTCCGGAGAGCAGCTGTaGTCATGGCATCAACGTCGA +
Preference number: 4 (lower is better)
Translates to: GGSSSLLCTEWHPLQYVKSGEQL*SWHQRR
Trigger: TCGACGTTGATGCCATGATCACAGCTGCTCTCCGGA...CTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTTCCGGAGAGCAGCTGTaGTCATGGCATCAACGTCGA +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGSGEQL*SWHQRR
Trigger: TCGACGTTGATGCCATGATCACAGCTGCTCTCCGGA...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACCTGTGGTCGAGGTCATaGCACAGGCATCCCACAATC +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHLWSRS*HRHPTI
Trigger: GATTGTGGGATGCCTGTGTCATGACCTCGACCACAG...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCGCGTGGTTGAAATGGTaGTGCTCCAAGGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTAWLKW*CSKVAE
Trigger: CTCTGCTACCTTGGAGCATCACCATTTCAACCACGC...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACGACCATGCTTCAAGGTaGAAGCCCAGGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADDHASR*KPRHAS
Trigger: GGAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTC...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGACCATGCTTCAAGGTaGAAGCCCAGGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRDHASR*KPRHAS
Trigger: GGAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTC...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR TCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGCCTTTGTTCCCCACCTaGAGGAGGAGAGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRPLFPT*RRRDSP
Trigger: AGGGCTGTCTCTCCTCCTTCAGGTGGGGAACAAAGG...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTATCTGGTCTGCCTCTaGATCAAAGCGCGGATCCTG +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTYLVCL*IKARIL
Trigger: CAGGATCCGCGCTTTGATGCAGAGGCAGACCAGATA...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGTTGACCTTCACCAGTaGCTGATACAAAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHVDLHQ*LIQRHA
Trigger: TGCATGCCTTTGTATCAGGCACTGGTGAAGGTCAAC...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAGAGGGTCCTGGGGTGTaGTCCCTGCCCCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALEGPGV*SLPHLF
Trigger: AAAGAGGTGGGGCAGGGAGCACACCCCAGGACCCTC...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATTCTCAAACCCCTCCCTaGTCAAGTGTCTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHSQTPP*SSVSLF
Trigger: GAAAAGAGAGACACTTGAGCAGGGAGGGGTTTGAGA...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGGAGGGAGTTCCAGTCTaGTATGCACTGAATGGCACC +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWREGVPV*YALNGT
Trigger: GGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTC...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGTTGGCGGGAGGCTGCCATaGTCCCAGACAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLNHLSRSLSFLYWCSYVGGRLP*SQTAFL
Trigger: AAGGAAAGCTGTCTGGGACCATGGCAGCCTCCCGCC...AACGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGGAGCCACAGACTGCTTaGCCCAGGACTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWREPQTA*PRTSSL
Trigger: AAGTGAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTC...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTAGATCTCCCACGGTTTaGTCACGGCTCCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGRSPTV*SRLQGH
Trigger: GTGACCTTGGAGCCGTGACCAAACCGTGGGAGATCT...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CCA 90 bp GGAGGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTGAAGAACCTCTGGGGTTGTTaGCACCAGGAAGCTGCTACC +
Preference number: 4 (lower is better)
Translates to: GGSSSLLCTEWHPLQYVKNLWGC*HQEAAT
Trigger: GGTAGCAGCTTCCTGGTGCCAACAACCCCAGAGGTT...CTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGTCTGGAACAGCCACCTaGCCAGAGTCCACGCCTCAA +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRSGTAT*PESTPQ
Trigger: TTGAGGCGTGGACTCTGGCCAGGTGGCTGTTCCAGA...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358450.8
3UTR CAA 72 bp GGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTaGCAGTATGTGAAGCTGTCCCTACCCACCAGGATT +
Preference number: 4 (lower is better)
Translates to: GSSSLLCTEWHP*QYVKLSLPTRI
Trigger: AATCCTGGTGGGTAGGGACAGCTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACAGGCATCAGGAATGTTaGCCGTTTCTCCATGCTCCC +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADRHQEC*PFLHAP
Trigger: GGGAGCATGGAGAAACGGTCAACATTCCTGATGCCT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTCACTGGAAGGCCTGTTaGAGCAACCAGCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPHWKAC*SNQLSN
Trigger: ATTGCTGAGCTGGTTGCTTCAACAGGCCTTCCAGTG...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAATCGATGGCAAGTTCTaGCACCAGAGGGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQIDGKF*HQRDVG
Trigger: GCCAACATCCCTCTGGTGTCAGAACTTGCCATCGAT...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTCAGCTGACACACGTTaGAGGCATGTCTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTSADTR*RHVSSC
Trigger: ACAACTGGAGACATGCCTTCAACGTGTGTCAGCTGA...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGATCGCGAACATCAGCTaGCACACGTTGAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRIANIS*HTLKAC
Trigger: ACATGCCTTCAACGTGTGTCAGCTGATGTTCGCGAT...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGTGGTCGAGGTCATaGCACAGGCATCCCACAATC +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQLWSRS*HRHPTI
Trigger: GATTGTGGGATGCCTGTGTCATGACCTCGACCACAG...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGCTGTGGTCGAGGTCATaGCACAGGCATCCCACAATC +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRLWSRS*HRHPTI
Trigger: GATTGTGGGATGCCTGTGTCATGACCTCGACCACAG...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTGCGTGGTTGAAATGGTaGTGCTCCAAGGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPAWLKW*CSKVAE
Trigger: CTCTGCTACCTTGGAGCATCACCATTTCAACCACGC...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGGCTTCAGTTTCACGTTaGCCTTCACCAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRASVSR*PSPVPD
Trigger: ATCAGGCACTGGTGAAGGTCAACGTGAAACTGAAGC...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGATGACATTGCTGGACTaGAAATGGCCCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRMTLLD*KWPFRL
Trigger: CAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTCAT...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCATGCTTCAAGGTaGAAGCCCAGGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAADHASR*KPRHAS
Trigger: GGAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTC...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTACACCACCAACGCTGCTaGCACCTCTGCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALHHQRC*HLCRCC
Trigger: ACAGCACCTGCAGAGGTGGCAGCAGCGTTGGTGGTG...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTCTTCTTGCCAGCAGCTaGCCCTTCCACCAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAALLASS*PFHQEK
Trigger: CTTTTCCTGGTGGAAGGGGCAGCTGCTGGCAAGAAG...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAATATCTGGTCTGCCTCTaGATCAAAGCGCGGATCCTG +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQYLVCL*IKARIL
Trigger: CAGGATCCGCGCTTTGATGCAGAGGCAGACCAGATA...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTTATCTGGTCTGCCTCTaGATCAAAGCGCGGATCCTG +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPYLVCL*IKARIL
Trigger: CAGGATCCGCGCTTTGATGCAGAGGCAGACCAGATA...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACTCAAGAGCCACAGACTaGTTGGCCCAGGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADSRATD*LAQDFF
Trigger: GAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTCTTGA...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGTCAAGAGCCACAGACTaGTTGGCCCAGGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRSRATD*LAQDFF
Trigger: GAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTCTTGA...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTCAATCCACTCCAGTTaGAACCGAGGCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTSIHSS*NRGSSS
Trigger: GGATGAACTGCCTCGGTTGCAACTGGAGTGGATTGA...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCAGAAACACCTGCAGTaGTTCGGAGCTGCAGACACG +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQQKHLQ*FGAADT
Trigger: CGTGTCTGCAGCTCCGAAGCACTGCAGGTGTTTCTG...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATAAAGGTCTTCTTGCCTaGTTCAGCATCTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHKGLLA*FSISHV
Trigger: AACATGGGAGATGCTGAAGCAGGCAAGAAGACCTTT...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS-3UTR CCA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCCTGGCTCAGAGTGGCTaGCGCCGACCCCACCCCGTG +
Preference number: 4 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFLAQSG*RRPHPV
Trigger: CACGGGGTGGGGTCGGCGCCAGCCACTCTGAGCCAG...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATATCTTCAAACAACTCTaGGTGCCTGTCCAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHIFKQL*VPVQES
Trigger: ACTTTCCTGGACAGGCACCCAGAGTTGTTTGAAGAT...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACGAGCCACAGACTGCTTaGCCCAGGACTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHEPQTA*PRTSSL
Trigger: AAGTGAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTC...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGAGCCACAGACTGCTTaGCCCAGGACTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQEPQTA*PRTSSL
Trigger: AAGTGAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTC...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGGAGCCACTCTTAGCTTaGAAGGCATTGTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWREPLLA*KALLVP
Trigger: GGGAACCAACAATGCCTTCCAAGCTAAGAGTGGCTC...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTAGATCTCCCACGGTTTaGTCACGGCTCCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAARSPTV*SRLQGH
Trigger: GTGACCTTGGAGCCGTGACCAAACCGTGGGAGATCT...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CCA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGCAGCTGCAGCTGACCTaGAGGTTTAGTTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLKMALQAVVILQLQLTWQLQLT*RFSSCL
Trigger: AAGACAGGAACTAAACCTCCAGGTCAGCTGCAGCTG...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGTCTTCAGAGTCCCTGTaGACCCCCATGTACGTAATC +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRSSESL*TPMYVI
Trigger: GATTACGTACATGGGGGTCCACAGGGACTCTGAAGA...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACGAGACGGAGTCTCGCTaGTCGCCCAGGCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDETESR*SPRLEG
Trigger: GCCCTCCAGCCTGGGCGACCAGCGAGACTCCGTCTC...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTGAGGCAGCAAAGAGCTaGGCGTTAGATATGGCGATT +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGEAAKS*ALDMAI
Trigger: AATCGCCATATCTAACGCTCAGCTCTTTGCTGCCTC...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAATCGCGAACATCAGCTaGCACACGTTGAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQIANIS*HTLKAC
Trigger: ACATGCCTTCAACGTGTGTCAGCTGATGTTCGCGAT...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGTCGGTCAGAATGTCTTaGAACCCAGCAGTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRSVRMS*NPAVVN
Trigger: GTTAACCACTGCTGGGTTTCAAGACATTCTGACCGA...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGGCGTGGTTGAAATGGTaGTGCTCCAAGGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRAWLKW*CSKVAE
Trigger: CTCTGCTACCTTGGAGCATCACCATTTCAACCACGC...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACACCTTCACCAGTGCCTaGTACAAAGGCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADTFTSA*YKGMQM
Trigger: CATCTGCATGCCTTTGTATCAGGCACTGGTGAAGGT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGACCTTCACCAGTGCCTaGTACAAAGGCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASRTFTSA*YKGMQM
Trigger: CATCTGCATGCCTTTGTATCAGGCACTGGTGAAGGT...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR TCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGCTTCAGTTTCACGTTaGCCTTCACCAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRASVSR*PSPVPD
Trigger: ATCAGGCACTGGTGAAGGTCAACGTGAAACTGAAGC...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR TCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACTTTTGCAGCTGCAGCTaGCCTGGAGGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADFCSCS*PGGLVP
Trigger: AGGAACTAAACCTCCAGGTCAGCTGCAGCTGCAAAA...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACATGACATTGCTGGACTaGAAATGGCCCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADMTLLD*KWPFRL
Trigger: CAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTCAT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACTGCTCTCTCTGCTGCTaGCCATGCTTCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHCSLCC*PCFKVK
Trigger: TTTCACCTTGAAGCATGGTCAGCAGCAGAGAGAGCA...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR TCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTGCTCTCTCTGCTGCTaGCCATGCTTCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASRCSLCC*PCFKVK
Trigger: TTTCACCTTGAAGCATGGTCAGCAGCAGAGAGAGCA...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR TCA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGGCCTGGCAAACATGGTaGAACCCTGTGTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: GLKMALQAVVILQLQLTWAWQTW*NPVSTK
Trigger: TTTAGTAGACACAGGGTTTCACCATGTTTGCCAGGC...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACCTGAGCTGCCGCCGCTaGCCCGGCTCCTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHLSCRR*PGSCSG
Trigger: TCCGGAACAGGAGCCGGGGCAGCGGCGGCAGCTCAG...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCTCCCATCGCCCCTGCTaGCACCGGCCCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSSHRPC*HRPSWD
Trigger: GTCCCAGCTGGGCCGGTGGCAGCAGGGGCGATGGGA...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGCATTTGAGTTCTCTGTaGTGCTGCAAGGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASRHLSSL*CCKAAE
Trigger: CTCTGCTGCCTTGCAGCAGCACAGAGAACTCAAATG...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGTATCTGGTCTGCCTCTaGATCAAAGCGCGGATCCTG +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRYLVCL*IKARIL
Trigger: CAGGATCCGCGCTTTGATGCAGAGGCAGACCAGATA...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGACTGGTTACAAGTTCTaGCACCTGTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRTGYKF*HLSGDL
Trigger: GAGATCTCCAGACAGGTGGCAGAACTTGTAACCAGT...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACTCAATCCACTCCAGTTaGAACCGAGGCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADSIHSS*NRGSSS
Trigger: GGATGAACTGCCTCGGTTGCAACTGGAGTGGATTGA...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGTCAATCCACTCCAGTTaGAACCGAGGCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRSIHSS*NRGSSS
Trigger: GGATGAACTGCCTCGGTTGCAACTGGAGTGGATTGA...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTCAATCCACTCCAGTTaGAACCGAGGCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASRSIHSS*NRGSSS
Trigger: GGATGAACTGCCTCGGTTGCAACTGGAGTGGATTGA...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGAGGGTCCTGGGGTGTaGTCCCTGCCCCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKEGPGV*SLPHLF
Trigger: AAAGAGGTGGGGCAGGGAGCACACCCCAGGACCCTC...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATCTTCATTTCAGCCCATaGGTGTTCATTAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHLHFSP*VFIREK
Trigger: CTTTTCCCTAATGAACACGCATGGGCTGAAATGAAG...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTTCCTGTTCACGTGGATaGCCTTGGAGCGGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSSCSRG*PWSGQN
Trigger: GTTTTGCCCGCTCCAAGGCCATCCACGTGAACAGGA...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATCATTTCAGCAGAGTTTaGGCCCGATGCATTATTTTC +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHHFSRV*ARCIIF
Trigger: GAAAATAATGCATCGGGCCCAAACTCTGCTGAAATG...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGCTTGGAAGGCATTGTTaGTTCCCCTGTGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRLGRHC*FPCGRG
Trigger: ACCTCGACCACAGGGGAACCAACAATGCCTTCCAAG...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTGTTCTGCCACCTGTCTaGAGATCTCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSVLPPV*RSPTVW
Trigger: CCAAACCGTGGGAGATCTCCAGACAGGTGGCAGAAC...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCGCCAGCAGTCGTTTTTaGTGTAGCTCTTCCCACTTA +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTASSRF*CSSSHL
Trigger: TAAGTGGGAAGAGCTACACCAAAAACGACTGCTGGC...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACCTGTCCACAGGTCCTTaGATCCAAAACAGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHLSTGP*IQNSPL
Trigger: TAGGGGACTGTTTTGGATCCAAGGACCTGTGGACAG...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAACTGTCCACAGGTCCTTaGATCCAAAACAGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQLSTGP*IQNSPL
Trigger: TAGGGGACTGTTTTGGATCCAAGGACCTGTGGACAG...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTTCCCCTTGCTACCAGTaGATGTTGCTATTGGCAACC +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGSPCYQ*MLLLAT
Trigger: GGTTGCCAATAGCAACATCCACTGGTAGCAAGGGGA...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGTGTCGATTTCATCATTaGATCGTCGATCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GLKMALQAVVILQLQLTWCRFHH*IVDPGR
Trigger: CCTACCAGGATCGACGATTCAATGATGAAATCGACA...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACTCGGTCAGAATGTCTTaGAACCCAGCAGTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHSVRMS*NPAVVN
Trigger: GTTAACCACTGCTGGGTTTCAAGACATTCTGACCGA...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGTCTCAAAGTACAGCGTaGGGTCTGTTGCCAATATTG +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRSQSTA*GLLPIL
Trigger: CAATATTGGCAACAGACCTCACGCTGTACTTTGAGA...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCCCGATCAAAAATTGCTaGAGGAGTGAGTTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTPIKNC*RSEFEL
Trigger: GAGCTCAAACTCACTCCTTCAGCAATTTTTGATCGG...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGACCTTCACCAGTGCCTaGTACAAAGGCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQTFTSA*YKGMQM
Trigger: CATCTGCATGCCTTTGTATCAGGCACTGGTGAAGGT...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGCTTCAGTTTCACGTTaGCCTTCACCAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAAASVSR*PSPVPD
Trigger: ATCAGGCACTGGTGAAGGTCAACGTGAAACTGAAGC...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGTGCTCTCTCTGCTGCTaGCCATGCTTCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQCSLCC*PCFKVK
Trigger: TTTCACCTTGAAGCATGGTCAGCAGCAGAGAGAGCA...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR TCA 90 bp GCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCGGCTGGAGAATTGCTTaGACCCAGGAAGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: AVPTHQDCHYIVDCAHNSGWRIA*TQEAEV
Trigger: AACCTCTGCTTCCTGGGTTCAAGCAATTCTCCAGCC...GCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTAGATTGCAATGGTGTTaGACTCCCCTTGCTACCAGT +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPRLQWC*TPLATS
Trigger: ACTGGTAGCAAGGGGAGTTCAACACCATTGCAATCT...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGTTGCCAATATTGACTaGTTCAAAAGCTGCATAAGG +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHVANID*FKSCIR
Trigger: CCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAAC...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACACTGGTTACAAGTTCTaGCACCTGTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADTGYKF*HLSGDL
Trigger: GAGATCTCCAGACAGGTGGCAGAACTTGTAACCAGT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGACTGGTTACAAGTTCTaGCACCTGTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASRTGYKF*HLSGDL
Trigger: GAGATCTCCAGACAGGTGGCAGAACTTGTAACCAGT...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACGTTGACCTTCACCAGTaGCTGATACAAAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADVDLHQ*LIQRHA
Trigger: TGCATGCCTTTGTATCAGGCACTGGTGAAGGTCAAC...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGTTGACCTTCACCAGTaGCTGATACAAAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQVDLHQ*LIQRHA
Trigger: TGCATGCCTTTGTATCAGGCACTGGTGAAGGTCAAC...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGCATGCTTCCCAGTaGATCCTTGAGATGTTAGGT +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHRHASQ*ILEMLG
Trigger: ACCTAACATCTCAAGGATGCACTGGGAAGCATGCCT...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTTCCATGGCTTCCTATTaGTTACAGGGCCTACACTCA +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGSMASY*LQGLHS
Trigger: TGAGTGTAGGCCCTGTAAGCAATAGGAAGCCATGGA...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409504.5
CDS-3UTR CCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTTGCCACCGGCCCAGCTaGGACTCAAGGGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSCHRPS*DSREPH
Trigger: GTGGGGTTCCCTTGAGTCCCAGCTGGGCCGGTGGCA...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGGAGCCACTCTTAGCTTaGAAGGCATTGTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHREPLLA*KALLVP
Trigger: GGGAACCAACAATGCCTTCCAAGCTAAGAGTGGCTC...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGGAGCCACTCTTAGCTTaGAAGGCATTGTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQEPLLA*KALLVP
Trigger: GGGAACCAACAATGCCTTCCAAGCTAAGAGTGGCTC...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGGTTCGAAGAACTCACTaGTTACAAGTTCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRVRRTH*LQVLPP
Trigger: AGGTGGCAGAACTTGTAACCAGTGAGTTCTTCGAAC...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTGCCAGCAGTCGTTTTTaGTGTAGCTCTTCCCACTTA +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGASSRF*CSSSHL
Trigger: TAAGTGGGAAGAGCTACACCAAAAACGACTGCTGGC...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTCAGCTGCAGCTGACCTaGAGGTTTAGTTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAAQLQLT*RFSSCL
Trigger: AAGACAGGAACTAAACCTCCAGGTCAGCTGCAGCTG...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGCTGTCCACAGGTCCTTaGATCCAAAACAGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRLSTGP*IQNSPL
Trigger: TAGGGGACTGTTTTGGATCCAAGGACCTGTGGACAG...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCATTCTTGGGACAGTCTaGCACAAAAAGGCATTCAGG +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTILGTV*HKKAFR
Trigger: CCTGAATGCCTTTTTGTGCCAGACTGTCCCAAGAAT...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTAGTGGATGTTGCTATTaGCAACCATGCAGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPSGCCY*QPCSEA
Trigger: GGCTTCACTGCATGGTTGCCAATAGCAACATCCACT...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACGAGGCCCCAGAGATTTaGACCAGTCTTGTGATTTTC +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADEAPEI*TSLVIF
Trigger: GAAAATCACAAGACTGGTCCAAATCTCTGGGGCCTC...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS-3UTR TCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAACCATCCCCAGCTCCATaGACATCCGGAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKPSPAP*TSGEQL
Trigger: CAGCTGCTCTCCGGATGTTCATGGAGCTGGGGATGG...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTTCAGCTGACACACGTTaGAGGCATGTCTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSSADTR*RHVSSC
Trigger: ACAACTGGAGACATGCCTTCAACGTGTGTCAGCTGA...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTCTCAAAGTACAGCGTaGGGTCTGTTGCCAATATTG +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASRSQSTA*GLLPIL
Trigger: CAATATTGGCAACAGACCTCACGCTGTACTTTGAGA...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGCCGATCAAAAATTGCTaGAGGAGTGAGTTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASRPIKNC*RSEFEL
Trigger: GAGCTCAAACTCACTCCTTCAGCAATTTTTGATCGG...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR TCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACACGGTCTCGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHTVSIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCGAGACCGT...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGGGGATTAAAAACGCCTaGAACCCGCAAGAGTTCAAC +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRGIKNA*NPQEFN
Trigger: GTTGAACTCTTGCGGGTTTCAGGCGTTTTTAATCCC...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATTCTAAATGCTCATCATaGAATTCTCCAGATACACCT +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHSKCSS*NSPDTP
Trigger: AGGTGTATCTGGAGAATTTCATGATGAGCATTTAGA...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCAATTTCACCACCTGTTaGGAGAGGCAATCCACAAAA +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTNFTTC*ERQSTK
Trigger: TTTTGTGGATTGCCTCTCTCAACAGGTGGTGAAATT...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389683.7
CDS-3UTR GCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCCAGACAGCTTTCCTTaGCTGTTTACACGTGAACCA +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQPDSFP*LFTREP
Trigger: TGGTTCACGTGTAAACAGGCAAGGAAAGCTGTCTGG...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATTGAGTTCTCTGTGCTaGTGCAAGGCAGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALLSSLC*CKAAEV
Trigger: CACCTCTGCTGCCTTGCAGCAGCACAGAGAACTCAA...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCACAAAGGCATGCAGATaGTATCAATCCACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTTKACR*YQSTPV
Trigger: AACTGGAGTGGATTGATAGCATCTGCATGCCTTTGT...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGAGGCATGCTTCCCAGTaGATCCTTGAGATGTTAGGT +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQRHASQ*ILEMLG
Trigger: ACCTAACATCTCAAGGATGCACTGGGAAGCATGCCT...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGACTCAAGGTAGTCAATaGTTAGTCTCCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRTQGSQ*LVSMAL
Trigger: CAGAGCCATGGAGACTAAGCATTGACTACCTTGAGT...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCGGGACCCCTATAGTTTaGTTTAAGTTGGTTACTGGT +
Preference number: 4 (lower is better)
Translates to: AGLKMALQAVVILQLQLTGTPIV*FKLVTG
Trigger: ACCAGTAACCAACTTAAAGCAAACTATAGGGGTCCC...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGGAGGCAGTTTCTTCCTaGATTCATTTCCCCCTCTAC +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQEAVSS*IHFPLY
Trigger: GTAGAGGGGGAAATGAATGCAGGAAGAAACTGCCTC...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAGGAGAGACAGCCCTaGAGAAGCTATTTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIREERQP*RSYFPL
Trigger: TAAAGGAAAATAGCTTCTGCAGGGCTGTCTCTCCTC...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATATCATCTTCAGTAAATaGAGCTCCTTCAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: PCPTSFFVLPVALSAADHIIFSK*SSFRNL
Trigger: AAGATTCCTGAAGGAGCTCCATTTACTGAAGATGAT...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTCTTGAAACCCAGCAGTaGTTAACATCGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPLETQQ*LTSRTS
Trigger: TGATGTTCGCGATGTTAACCACTGCTGGGTTTCAAG...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGTTCGAAGAACTCACTaGTTACAAGTTCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRVRRTH*LQVLPP
Trigger: AGGTGGCAGAACTTGTAACCAGTGAGTTCTTCGAAC...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGGCCAGCAGTCGTTTTTaGTGTAGCTCTTCCCACTTA +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRASSRF*CSSSHL
Trigger: TAAGTGGGAAGAGCTACACCAAAAACGACTGCTGGC...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTCTTGGTCCTTTGGTGTaGGGACTGAATAAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPLGPLV*GLNKSQ
Trigger: CTGACTTTTATTCAGTCCCCACACCAAAGGACCAAG...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
3UTR CAA 72 bp CACTGTATGGCAGATTGCAATGGTGTTGAACTCCCCTaGCTACCAGTGGATGTTGCTATTGGCAACCATGCA +
Preference number: 4 (lower is better)
Translates to: HCMADCNGVELP*LPVDVAIGNHA
Trigger: TGCATGGTTGCCAATAGCAACATCCACTGGTAGCAAGGGGAGTTCAACACCATTGCAATCTGCCATACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACTCTCCATGCTTTCTTTaGAACTGTTCTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADSPCFL*NCSQHQ
Trigger: CTGATGCTGAGAACAGTTTCAAAGAAAGCATGGAGA...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGCCTCAAAAAGTCGTTaGTCTGCATCATCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRASKSR*SASSKG
Trigger: ACCTTTTGATGATGCAGATCAACGACTTTTTGAGGC...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp GCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTCGGTCAGAATGTCTTaGAACCCAGCAGTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: AVPTHQDCHYIVDCAHNSSVRMS*NPAVVN
Trigger: GTTAACCACTGCTGGGTTTCAAGACATTCTGACCGA...GCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGTCTGTTGCCAATATTaGCTGCTTCAAAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRVCCQY*LLQKLH
Trigger: ATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGAC...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACGTCTGTTGCCAATATTaGCTGCTTCAAAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHVCCQY*LLQKLH
Trigger: ATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGAC...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCCGATCAAAAATTGCTaGAGGAGTGAGTTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQPIKNC*RSEFEL
Trigger: GAGCTCAAACTCACTCCTTCAGCAATTTTTGATCGG...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGCCGATCAAAAATTGCTaGAGGAGTGAGTTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRPIKNC*RSEFEL
Trigger: GAGCTCAAACTCACTCCTTCAGCAATTTTTGATCGG...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR TCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGACCATGCTTCAAGGTaGAAGCCCAGGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKDHASR*KPRHAS
Trigger: GGAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTC...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp CCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTTATAAGGATCTCCTGACCTCGTaGTCCGCCCGCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PTMYSFLGGELGLISIYKDLLTS*SARLGL
Trigger: AAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATC...CTTATAAATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCAGGCTGCAGTGGCTGTaGTTGTGCCACTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFRLQWL*LCHCPP
Trigger: TGGAGGGCAGTGGCACAATCACAGCCACTGCAGCCT...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTTGCCACCTCTGCAGGTaGTGTGAGCCAAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSCHLCR*CEPSCW
Trigger: CCAGCAGCTTGGCTCACAGCACCTGCAGAGGTGGCA...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAAAGCCATTTGGTCCAGTaGCACCACCAACGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKSHLVQ*HHQRCC
Trigger: GCAGCAGCGTTGGTGGTGGCACTGGACCAAATGGCT...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGCCTCTAGCAAAGCTCTaGTTCTTTCATATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRPLAKL*FFHILS
Trigger: GGAAAGAATATGAAAGAAGCAGAGCTTTGCTAGAGG...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGGACTGCTTCAAAAGCTaGATAAGGTCACTATATTCC +
Preference number: 4 (lower is better)
Translates to: GLKMALQAVVILQLQLTWDCFKS*IRSLYS
Trigger: GGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTC...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAACAAAGGCATGCAGATaGTATCAATCCACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQTKACR*YQSTPV
Trigger: AACTGGAGTGGATTGATAGCATCTGCATGCCTTTGT...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTCCTGATACAAAGGCATaGAGATGCTATCAATCCACT +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGPDTKA*RCYQST
Trigger: AGTGGATTGATAGCATCTGCATGCCTTTGTATCAGG...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTCCTGATACAAAGGCATaGAGATGCTATCAATCCACT +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPPDTKA*RCYQST
Trigger: AGTGGATTGATAGCATCTGCATGCCTTTGTATCAGG...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCAGAGGGTCCTGGGGTGTaGTCCCTGCCCCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSEGPGV*SLPHLF
Trigger: AAAGAGGTGGGGCAGGGAGCACACCCCAGGACCCTC...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTCTTCATTTCAGCCCATaGGTGTTCATTAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPLHFSP*VFIREK
Trigger: CTTTTCCCTAATGAACACGCATGGGCTGAAATGAAG...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR GCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGGGACCCCTATAGTTTaGTTTAAGTTGGTTACTGGT +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRGTPIV*FKLVTG
Trigger: ACCAGTAACCAACTTAAAGCAAACTATAGGGGTCCC...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGTCACGTGGATGGCCTTaGAGCGGGCAAAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKSRGWP*SGQNSS
Trigger: GGAAGAGTTTTGCCCGCTCCAAGGCCATCCACGTGA...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTCATTTCAGCAGAGTTTaGGCCCGATGCATTATTTTC +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPHFSRV*ARCIIF
Trigger: GAAAATAATGCATCGGGCCCAAACTCTGCTGAAATG...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGAATGAATGTCATCGATaGCAAGTTCTGACACCAGAG +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRNECHR*QVLTPE
Trigger: CTCTGGTGTCAGAACTTGCCATCGATGACATTCATT...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTTGAAACCCAGCAGTaGTTAACATCGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQLETQQ*LTSRTS
Trigger: TGATGTTCGCGATGTTAACCACTGCTGGGTTTCAAG...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTACTGTCCACAGGTCCTTaGATCCAAAACAGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALLSTGP*IQNSPL
Trigger: TAGGGGACTGTTTTGGATCCAAGGACCTGTGGACAG...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp GCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCCTGCTATGCACTGAATaGCACCCTTTGCAGTATGTG +
Preference number: 4 (lower is better)
Translates to: AVPTHQDCHYIVDCAHNSLLCTE*HPLQYV
Trigger: CACATACTGCAAAGGGTGCCATTCAGTGCATAGCAG...GCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACAAGCTGGTGCAATTTTaGCCTTCTTGTAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADKLVQF*PSCSQT
Trigger: AGTCTGACTACAAGAAGGCCAAAATTGCACCAGCTT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGTCTCCATGCTTTCTTTaGAACTGTTCTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRSPCFL*NCSQHQ
Trigger: CTGATGCTGAGAACAGTTTCAAAGAAAGCATGGAGA...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGTCTGTTTAACACTTaGGCCACTCCAATTATTTGG +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHSLFNT*ATPIIW
Trigger: CCAAATAATTGGAGTGGCTCAAGTGTTAAACAGACT...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGAGTCTGTTTAACACTTaGGCCACTCCAATTATTTGG +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASRSLFNT*ATPIIW
Trigger: CCAAATAATTGGAGTGGCTCAAGTGTTAAACAGACT...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGGCCTCAAAAAGTCGTTaGTCTGCATCATCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQASKSR*SASSKG
Trigger: ACCTTTTGATGATGCAGATCAACGACTTTTTGAGGC...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGATCGATGGCAAGTTCTaGCACCAGAGGGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKIDGKF*HQRDVG
Trigger: GCCAACATCCCTCTGGTGTCAGAACTTGCCATCGAT...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGGAAAAGTCATCAAAATaGATGTCATCGATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWREKSSK*MSSMAS
Trigger: ACTTGCCATCGATGACATTCATTTTGATGACTTTTC...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGGATGTTAGGTCTTTCTaGGCTAAAAGAACAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GLKMALQAVVILQLQLTWDVRSF*AKRTKG
Trigger: TCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATC...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGGGAGAACTGGGATTaGTCAGTATTTATAAGGATA +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQGENWD*SVFIRI
Trigger: TATCCTTATAAATACTGATCAATCCCAGTTCTCCCC...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR TCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGGGGAGAACTGGGATTaGTCAGTATTTATAAGGATA +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRGENWD*SVFIRI
Trigger: TATCCTTATAAATACTGATCAATCCCAGTTCTCCCC...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR TCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACGATACATCTGTAGTATaGTTGTGCTTACATCTACCC +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADDTSVV*LCLHLP
Trigger: GGGTAGATGTAAGCACAATCATACTACAGATGTATC...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGCCTCTAGCAAAGCTCTaGTTCTTTCATATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRPLAKL*FFHILS
Trigger: GGAAAGAATATGAAAGAAGCAGAGCTTTGCTAGAGG...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACCCTCTAGCAAAGCTCTaGTTCTTTCATATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHPLAKL*FFHILS
Trigger: GGAAAGAATATGAAAGAAGCAGAGCTTTGCTAGAGG...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTCAACCAGCTCAGCAATaGTGTTATTTATTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGQPAQQ*CYLLAS
Trigger: ACTGGCTAATAAATAACAGCATTGCTGAGCTGGTTG...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAAAAAGTCGTTGATCTaGATCATCAAAAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GLKMALQAVVILQLQLTWKKSLI*IIKRFP
Trigger: GGGAAACCTTTTGATGATGCAGATCAACGACTTTTT...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGTCAAGAGCCACAGACTaGTTGGCCCAGGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKSRATD*LAQDFF
Trigger: GAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTCTTGA...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGACTGCTTCAAAAGCTaGATAAGGTCACTATATTCC +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQDCFKS*IRSLYS
Trigger: GGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTC...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACGTTGCCAATATTGACTaGTTCAAAAGCTGCATAAGG +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADVANID*FKSCIR
Trigger: CCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAAC...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTCCTGATACAAAGGCATaGAGATGCTATCAATCCACT +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAAPDTKA*RCYQST
Trigger: AGTGGATTGATAGCATCTGCATGCCTTTGTATCAGG...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATTGAGGCTGGAGAATTaGTTGAACCCAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALLRLEN*LNPGSR
Trigger: TCTGCTTCCTGGGTTCAAGCAATTCTCCAGCCTCAA...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGAGCCACAGACTGCTTaGCCCAGGACTTCTTCACTT +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKEPQTA*PRTSSL
Trigger: AAGTGAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTC...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGCTTGGAAGGCATTGTTaGTTCCCCTGTGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKLGRHC*FPCGRG
Trigger: ACCTCGACCACAGGGGAACCAACAATGCCTTCCAAG...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAAAGATCTCCCACGGTTTaGTCACGGCTCCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKRSPTV*SRLQGH
Trigger: GTGACCTTGGAGCCGTGACCAAACCGTGGGAGATCT...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAAGTTCTGCCACCTGTCTaGAGATCTCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKVLPPV*RSPTVW
Trigger: CCAAACCGTGGGAGATCTCCAGACAGGTGGCAGAAC...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACGTTCTGCCACCTGTCTaGAGATCTCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDVLPPV*RSPTVW
Trigger: CCAAACCGTGGGAGATCTCCAGACAGGTGGCAGAAC...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTGTTCGAAGAACTCACTaGTTACAAGTTCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSVRRTH*LQVLPP
Trigger: AGGTGGCAGAACTTGTAACCAGTGAGTTCTTCGAAC...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTTCACTTAGGAAGCTaGTGCAATTTTGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQLHLGS*CNFGLL
Trigger: AAGAAGGCCAAAATTGCACCAGCTTCCTAAGTGAAG...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTTATAAGCCTCTGCAGGTGCTGTaGGCCAAGCTGCTGGTACCA +
Preference number: 4 (lower is better)
Translates to: PTMYSFLGGELGLISIYKPLQVL*AKLLVP
Trigger: TGGTACCAGCAGCTTGGCTCACAGCACCTGCAGAGG...CTTATAAATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp TCAGTCTGTTCTTCAAAGAGGTCATTAACCACCTCTAGCAAAGCAAAGCAGCTTGAGGCAGCAAAGAGCTaGGCGTTAGATATGGCGATT +
Preference number: 4 (lower is better)
Translates to: SVCSSKRSLTTSSKAKQLEAAKS*ALDMAI
Trigger: AATCGCCATATCTAACGCTCAGCTCTTTGCTGCCTC...AAGCTGCTTTGCTTTGCTAGAGGTGGTTAATGACCTCTTTGAAGAACAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR TCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTTCTCCATGCTTTCTTTaGAACTGTTCTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSSPCFL*NCSQHQ
Trigger: CTGATGCTGAGAACAGTTTCAAAGAAAGCATGGAGA...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACCACTGGAAGGCCTGTTaGAGCAACCAGCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDHWKAC*SNQLSN
Trigger: ATTGCTGAGCTGGTTGCTTCAACAGGCCTTCCAGTG...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCCCTGGTAGGCATCACTaGTGTTCACTGGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFPGRHH*CSLEGL
Trigger: CAGGCCTTCCAGTGAACATCAGTGATGCCTACCAGG...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGCAGGACTTCTTCACTTaGTCATACATAATTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASRQDFFT*SYIIVL
Trigger: CAACACAATTATGTATGATCAAGTGAAGAAGTCCTG...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACCAGGACTTCTTCACTTaGTCATACATAATTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHQDFFT*SYIIVL
Trigger: CAACACAATTATGTATGATCAAGTGAAGAAGTCCTG...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGGAAAAGTCATCAAAATaGATGTCATCGATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: TSFFVLPVALSAADHASREKSSK*MSSMAS
Trigger: ACTTGCCATCGATGACATTCATTTTGATGACTTTTC...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTCCATCCCCAGCTCCATaGACATCCGGAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YSPTMYSFLGGELGLISIPSPAP*TSGEQL
Trigger: CAGCTGCTCTCCGGATGTTCATGGAGCTGGGGATGG...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGTTTTGCAGCTGCAGCTaGCCTGGAGGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKFCSCS*PGGLVP
Trigger: AGGAACTAAACCTCCAGGTCAGCTGCAGCTGCAAAA...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTCAGGCTGGAGGGCAGTaGCGTGATCTCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: YSPTMYSFLGGELGLISIQAGGQ*RDLDSL
Trigger: CAGTGAGTCGAGATCACGTCACTGCCCTCCAGCCTG...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCTGCTGTGAGCCAAGCTaGTGGTACCAGCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVCCEPS*WYQPKR
Trigger: CCTCTTTGGCTGGTACCAGCAGCTTGGCTCACAGCA...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp TCAACCTTAGTGGAAGCTTGTAGGGTTTATGCTATAAATTATGTTCCCCTTAGCTGCCTTCCGGAGAAGTaGCCTCCGTCGTACACTACT +
Preference number: 4 (lower is better)
Translates to: STLVEACRVYAINYVPLSCLPEK*PPSYTT
Trigger: AGTAGTGTACGACGGAGGGCACTTCTCCGGAAGGCA...GCTAAGGGGAACATAATTTATAGCATAAACCCTACAAGCTTCCACTAAGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAGAGGTGTTCCTGCATaGACATCAAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSRGVPA*TSKNLE
Trigger: CTCCAAATTCTTTGATGTGCATGCAGGAACACCTCT...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACAGAGTTTGGGCCCGATaGATTATTTTCTTGACAATT +
Preference number: 4 (lower is better)
Translates to: CWTENGPSGCSHFAAAADRVWAR*IIFLTI
Trigger: AATTGTCAAGAAAATAATGCATCGGGCCCAAACTCT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTAGAGTTTGGGCCCGATaGATTATTTTCTTGACAATT +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPRVWAR*IIFLTI
Trigger: AATTGTCAAGAAAATAATGCATCGGGCCCAAACTCT...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCAACCAGCTCAGCAATaGTGTTATTTATTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQQPAQQ*CYLLAS
Trigger: ACTGGCTAATAAATAACAGCATTGCTGAGCTGGTTG...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTAAAAAGTCGTTGATCTaGATCATCAAAAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PRAFISAHACSLGKSEGPKKSLI*IIKRFP
Trigger: GGGAAACCTTTTGATGATGCAGATCAACGACTTTTT...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTAAAAAGTCGTTGATCTaGATCATCAAAAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGKKSLI*IIKRFP
Trigger: GGGAAACCTTTTGATGATGCAGATCAACGACTTTTT...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR GCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGGACTGCTTCAAAAGCTaGATAAGGTCACTATATTCC +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQDCFKS*IRSLYS
Trigger: GGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTC...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGGTTGCCAATATTGACTaGTTCAAAAGCTGCATAAGG +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQVANID*FKSCIR
Trigger: CCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAAC...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGCCCATCAAACACATTTaGTATAGTCCTACTATGTAT +
Preference number: 4 (lower is better)
Translates to: GLKMALQAVVILQLQLTWPIKHI*YSPTMY
Trigger: ATACATAGTAGGACTATAGCAAATGTGTTTGATGGG...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAACTCAAGGTAGTCAATaGTTAGTCTCCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALTQGSQ*LVSMAL
Trigger: CAGAGCCATGGAGACTAAGCATTGACTACCTTGAGT...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTACATATCCTCTTACCTGCTCTaGAGAGGCAGTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PTHQDCHYIVDCAHNSYISSYLL*RGSFFL
Trigger: CAGGAAGAAACTGCCTCTGCAGAGCAGGTAAGAGGA...TATGTAGCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAATGGAAGATACATCTaGATAACCTTTCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHNGRYI*ITFLAV
Trigger: AACAGCCAGAAAGGTTATGCAGATGTATCTTCCATT...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409504.5
CDS-3UTR CCA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAATCATCTTCAGTAAATaGAGCTCCTTCAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQIIFSK*SSFRNL
Trigger: AAGATTCCTGAAGGAGCTCCATTTACTGAAGATGAT...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGCGAAATATATCACGATaGTTTTTGATGTTCCAATCG +
Preference number: 4 (lower is better)
Translates to: LKMALQAVVILQLQLTWRRNISR*FLMFQS
Trigger: CGATTGGAACATCAAAAACCATCGTGATATATTTCG...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACTCAATCCATTCCTTCTaGGAGAAAACTTTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHSIHSF*EKTLSV
Trigger: TACAGACAAAGTTTTCTCCCAGAAGGAATGGATTGA...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTAGCCTCCCCAGTAGCTaGGACTACAGACGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: YSPTMYSFLGGELGLISISLPSS*DYRRLP
Trigger: TGGCAGGCGTCTGTAGTCCCAGCTACTGGGGAGGCT...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TCAGTCTGTTCTTCAAAGAGGTCATTAACCACCTCTAGCAAAGCAAAGCAGCTTCTGTGGCCTGATGAATaGGGAAATCTGACAGACAGG +
Preference number: 4 (lower is better)
Translates to: SVCSSKRSLTTSSKAKQLLWPDE*GNLTDR
Trigger: CCTGTCTGTCAGATTTCCCCATTCATCAGGCCACAG...AAGCTGCTTTGCTTTGCTAGAGGTGGTTAATGACCTCTTTGAAGAACAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR TCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCAATTCCAGCAGCGCACTaGGAATATGGGCTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSIPAAH*EYGLWW
Trigger: CCACCACAGCCCATATTCTCAGTGCGCTGCTGGAAT...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACGAGGCAGCAAAGAGCTaGGCGTTAGATATGGCGATT +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDEAAKS*ALDMAI
Trigger: AATCGCCATATCTAACGCTCAGCTCTTTGCTGCCTC...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCCACTGGAAGGCCTGTTaGAGCAACCAGCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFHWKAC*SNQLSN
Trigger: ATTGCTGAGCTGGTTGCTTCAACAGGCCTTCCAGTG...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGAGAACAGATCTTATGTaGAAACCAGATATCTGGTCT +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRRTDLM*KPDIWS
Trigger: AGACCAGATATCTGGTTTTCACATAAGATCTGTTCT...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR TCA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGAGAACAGATCTTATGTaGAAACCAGATATCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DIAGLKMALQAVVILQLQRTDLM*KPDIWS
Trigger: AGACCAGATATCTGGTTTTCACATAAGATCTGTTCT...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTCAGGACTTCTTCACTTaGTCATACATAATTGTGTTG +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAAQDFFT*SYIIVL
Trigger: CAACACAATTATGTATGATCAAGTGAAGAAGTCCTG...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCATCCGGAGAGCAGCTGTaGTCATGGCATCAACGTCGA +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSSGEQL*SWHQRR
Trigger: TCGACGTTGATGCCATGATCACAGCTGCTCTCCGGA...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGGATGTTAGGTCTTTCTaGGCTAAAAGAACAAAAGGA +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRDVRSF*AKRTKG
Trigger: TCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATC...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR TCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTACCCTTTGCAGTATGTaGAGCTGTCCCTACCCACCA +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSTLCSM*SCPYPP
Trigger: TGGTGGGTAGGGACAGCTTCACATACTGCAAAGGGT...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCTCAAGACAGGAGAAATAGATGGAGGCAATTACAAACAGCTACTAGATTGATGCAGTCTGCTATGCACTaGATGGCACCCTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PQDRRNRWRQLQTATRLMQSAMH*MAPFAV
Trigger: TACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTG...CATCAATCTAGTAGCTGTTTGTAATTGCCTCCATCTATTTCTCCTGTCTTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp GTCTGTTCTTCAAAGAGGTCATTAACCACCTCTAGCAAAGCAAAGCAGCTTTTCTCTGCATCAAGATGTTaGGTGAACTGGGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: VCSSKRSLTTSSKAKQLFSASRC*VNWDGE
Trigger: CTCACCATCCCAGTTCACTCAACATCTTGATGCAGA...GAAAAGCTGCTTTGCTTTGCTAGAGGTGGTTAATGACCTCTTTGAAGAACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR GCA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTAAAAAGTCGTTGATCTaGATCATCAAAAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: HCWTENGPSGCSHFAAAAKKSLI*IIKRFP
Trigger: GGGAAACCTTTTGATGATGCAGATCAACGACTTTTT...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR GCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTTCAAGAGCCACAGACTaGTTGGCCCAGGACTTCTTC +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSSRATD*LAQDFF
Trigger: GAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTCTTGA...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGAATATGCGTTCTTTaGCCAGACTGTTATTTCTTA +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHRICVL*PDCYFL
Trigger: TAAGAAATAACAGTCTGGGCAAAGAACGCATATTCT...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp TTTCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGTTCTCTACAATTACCTaGTCTCCCCTCAATTCCATT +
Preference number: 4 (lower is better)
Translates to: FPLTTCLGPCLSFTGVLTFSTIT*SPLNSI
Trigger: AATGGAATTGAGGGGAGAGCAGGTAATTGTAGAGAA...CGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTTTCCCGCCATTCTCTTaGCTCAGCCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: YSPTMYSFLGGELGLISIFPPFS*LSLPSS
Trigger: GCTACTGGGGAGGCTGAGGCAAGAGAATGGCGGGAA...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAACAACCTCCTCTTACCTaGTCTGCAGAGGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKQPPLT*SAEAVS
Trigger: AGAAACTGCCTCTGCAGAGCAGGTAAGAGGAGGTTG...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTATGGATAACTGCATATaGCTCACATTCTTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGMDNCI*LTFLQN
Trigger: ATTTTGCAAGAATGTGAGGCATATGCAGTTATCCAT...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CTTGACAATTTTCTCCAGGTCAGTCTGTTCTTCAAAGAGGTCATTAACCACCTCTCCATGGCTTCCTATTaGTTACAGGGCCTACACTCA +
Preference number: 4 (lower is better)
Translates to: LDNFLQVSLFFKEVINHLSMASY*LQGLHS
Trigger: TGAGTGTAGGCCCTGTAAGCAATAGGAAGCCATGGA...GAGGTGGTTAATGACCTCTTTGAAGAACAGACTGACCTGGAGAAAATTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR CCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTGTGGGCAGAGCCATTTaGTCCAGTGCCACCACCAAC +
Preference number: 4 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFVGRAI*SSATTN
Trigger: GTTGGTGGTGGCACTGGACCAAATGGCTCTGCCCAC...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTTTTGAACATGTTGCATaGTATGATAGCACATCAAGA +
Preference number: 4 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGFEHVA*YDSTSR
Trigger: TCTTGATGTGCTATCATACCATGCAACATGTTCAAA...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACCGAAATATATCACGATaGTTTTTGATGTTCCAATCG +
Preference number: 4 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHRNISR*FLMFQS
Trigger: CGATTGGAACATCAAAAACCATCGTGATATATTTCG...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACCAGCTGCAGCTGACCTaGAGGTTTAGTTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDQLQLT*RFSSCL
Trigger: AAGACAGGAACTAAACCTCCAGGTCAGCTGCAGCTG...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGTCAATCCATTCCTTCTaGGAGAAAACTTTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRSIHSF*EKTLSV
Trigger: TACAGACAAAGTTTTCTCCCAGAAGGAATGGATTGA...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp TTTCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGGGAGATTCTAAGACTTaGAGAGTCCTAAGATTACAG +
Preference number: 4 (lower is better)
Translates to: FPLTTCLGPCLSFTGVLTGDSKT*RVLRLQ
Trigger: CTGTAATCTTAGGACTCTCCAAGTCTTAGAATCTCC...CGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TCTTCAAAGAGGTCATTAACCACCTCTAGCAAAGCAAAGCAGCTTTTCCTCACTAGACAGGAAGCTTTCTaGCTGTTCCATGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SSKRSLTTSSKAKQLFLTRQEAF*LFHGFL
Trigger: TAGGAAGCCATGGAACAGCCAGAAAGCTTCCTGTCT...AGTGAGGAAAAGCTGCTTTGCTTTGCTAGAGGTGGTTAATGACCTCTTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR TCA 90 bp TTTCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGAATTCCAGAAAGAACTaGCGCTCATTATGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: FPLTTCLGPCLSFTGVLTNSRKN*RSLCFF
Trigger: GAAAAAGCATAATGAGCGTCAGTTCTTTCTGGAATT...CGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTGAGGCAGCAAAGAGCTaGGCGTTAGATATGGCGATT +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSEAAKS*ALDMAI
Trigger: AATCGCCATATCTAACGCTCAGCTCTTTGCTGCCTC...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAAGTCTGTTTAACACTTaGGCCACTCCAATTATTTGG +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALSLFNT*ATPIIW
Trigger: CCAAATAATTGGAGTGGCTCAAGTGTTAAACAGACT...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACATCGATGGCAAGTTCTaGCACCAGAGGGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHIDGKF*HQRDVG
Trigger: GCCAACATCCCTCTGGTGTCAGAACTTGCCATCGAT...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp TCAACCTTAGTGGAAGCTTGTAGGGTTTATGCTATAAATTATGTTCCCCTTAGCTCAGCTGACACACGTTaGAGGCATGTCTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: STLVEACRVYAINYVPLSSADTR*RHVSSC
Trigger: ACAACTGGAGACATGCCTTCAACGTGTGTCAGCTGA...GCTAAGGGGAACATAATTTATAGCATAAACCCTACAAGCTTCCACTAAGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACGCGTGGTTGAAATGGTaGTGCTCCAAGGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHAWLKW*CSKVAE
Trigger: CTCTGCTACCTTGGAGCATCACCATTTCAACCACGC...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCACCTTCACCAGTGCCTaGTACAAAGGCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVTFTSA*YKGMQM
Trigger: CATCTGCATGCCTTTGTATCAGGCACTGGTGAAGGT...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTACCTTCACCAGTGCCTaGTACAAAGGCATGCAGATG +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSTFTSA*YKGMQM
Trigger: CATCTGCATGCCTTTGTATCAGGCACTGGTGAAGGT...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR TCA 90 bp TCAACCTTAGTGGAAGCTTGTAGGGTTTATGCTATAAATTATGTTCCCCTTAGCGCTTCAGTTTCACGTTaGCCTTCACCAGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: STLVEACRVYAINYVPLSASVSR*PSPVPD
Trigger: ATCAGGCACTGGTGAAGGTCAACGTGAAACTGAAGC...GCTAAGGGGAACATAATTTATAGCATAAACCCTACAAGCTTCCACTAAGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTTTTTGCAGCTGCAGCTaGCCTGGAGGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSFCSCS*PGGLVP
Trigger: AGGAACTAAACCTCCAGGTCAGCTGCAGCTGCAAAA...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR TCA 90 bp CCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTTATAAGGACCATGCTTCAAGGTaGAAGCCCAGGCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: PTMYSFLGGELGLISIYKDHASR*KPRHAS
Trigger: GGAAGCATGCCTGGGCTTTCACCTTGAAGCATGGTC...CTTATAAATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR TCA 90 bp TCAAAGAGGTCATTAACCACCTCTAGCAAAGCAAAGCAGCTTTTCCTCACTATCACAGTGGACTTTTCTTaGCTCATCTTCCAGCACTCT +
Preference number: 4 (lower is better)
Translates to: SKRSLTTSSKAKQLFLTITVDFS*LIFQHS
Trigger: AGAGTGCTGGAAGATGAGTCAAGAAAAGTCCACTGT...GATAGTGAGGAAAAGCTGCTTTGCTTTGCTAGAGGTGGTTAATGACCTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR GCA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCGCCTCTAGCTGTTCCTaGACATGTTCACCCCCACCA +
Preference number: 4 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSASSCS*TCSPPP
Trigger: TGGTGGGGGTGAACATGTGCAGGAACAGCTAGAGGC...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCAACCAAATGTTTTCCTaGCCCGAGGCCTCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFNQMFS*PEASSC
Trigger: ACAGCTAGAGGCCTCGGGGCAGGAAAACATTTGGTT...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTTATAAGAGACCAAGGTCTTCTTaGCAGCAGCTGCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PTMYSFLGGELGLISIYKRPRSS*QQLPLP
Trigger: TGGAAGGGGCAGCTGCTGGCAAGAAGACCTTGGTCT...CTTATAAATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTACATAATGAAGGTTTGTAGGTaGTCTGGATGTCCAAACCCT +
Preference number: 4 (lower is better)
Translates to: PTHQDCHYIVDCAHNSYIMKVCR*SGCPNP
Trigger: AGGGTTTGGACATCCAGAGCACCTACAAACCTTCAT...TATGTAGCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GTAATCTTAAATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAACCAGGAAGCAGAGGTTaGAGTAAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: VILNFIPELLTRRTQGSQPGSRG*SKPRSR
Trigger: GCGTGATCTCGGCTTACTGCAACCTCTGCTTCCTGG...TTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATTTAAGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACTTACCCAGAAACACCTaGAGTGCTTCGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHLPRNT*SASELQ
Trigger: CTGCAGCTCCGAAGCACTGCAGGTGTTTCTGGGTAA...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCTCAAGACAGGAGAAATAGATGGAGGCAATTACAAACAGCTACTAGATTGATGGTGTTGAACTCCCCTTaGTACCAGTGGATGTTGCTA +
Preference number: 4 (lower is better)
Translates to: PQDRRNRWRQLQTATRLMVLNSP*YQWMLL
Trigger: TAGCAACATCCACTGGTAGCAAGGGGAGTTCAACAC...CATCAATCTAGTAGCTGTTTGTAATTGCCTCCATCTATTTCTCCTGTCTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGTTGGCACCAGGAAGCTaGTACCTTCCTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLLAPGS*YLPVHC
Trigger: GCAGTGGACAGGAAGGTAGCAGCTTCCTGGTGCCAA...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGTTTGAACATGTTGCATaGTATGATAGCACATCAAGA +
Preference number: 4 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRFEHVA*YDSTSR
Trigger: TCTTGATGTGCTATCATACCATGCAACATGTTCAAA...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CCA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCAGATCTCCCACGGTTTaGTCACGGCTCCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSRSPTV*SRLQGH
Trigger: GTGACCTTGGAGCCGTGACCAAACCGTGGGAGATCT...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGTTCGAAGAACTCACTaGTTACAAGTTCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKVRRTH*LQVLPP
Trigger: AGGTGGCAGAACTTGTAACCAGTGAGTTCTTCGAAC...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTTCTCCCATGTTGCTCTaGAACAGCCACCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFSPMLL*NSHLAR
Trigger: TCTGGCCAGGTGGCTGTTCCAGAGCAACATGGGAGA...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358450.8
3UTR CAA 72 bp AGAAATAGATGGAGGCAATTACAAACAGCTACTAGATaGATGGTTGACATTGTCAGGGCTCCACTGTATGGC +
Preference number: 4 (lower is better)
Translates to: RNRWRQLQTATR*MVDIVRAPLYG
Trigger: GCCATACAGTGGAGCCCTGACAATGTCAACCATCAATCTAGTAGCTGTTTGTAATTGCCTCCATCTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CCTCAAGACAGGAGAAATAGATGGAGGCAATTACAAACAGCTACTAGATTGATGTTGCCTGTTTACACGTaGACCAAATGTTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PQDRRNRWRQLQTATRLMLPVYT*TKCFPA
Trigger: GGCAGGAAAACATTTGGTTCACGTGTAAACAGGCAA...CATCAATCTAGTAGCTGTTTGTAATTGCCTCCATCTATTTCTCCTGTCTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGTCTGTAATGAAGGTTATCGATGGCAAGTTCTaGCACCAGAGGGATGTTGGC +
Preference number: 4 (lower is better)
Translates to: QNLSIHSFWEKTLSVMKVIDGKF*HQRDVG
Trigger: GCCAACATCCCTCTGGTGTCAGAACTTGCCATCGAT...AACCTTCATTACAGACAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACATCGCGAACATCAGCTaGCACACGTTGAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHIANIS*HTLKAC
Trigger: ACATGCCTTCAACGTGTGTCAGCTGATGTTCGCGAT...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGTCTGTTGCCAATATTaGCTGCTTCAAAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKVCCQY*LLQKLH
Trigger: ATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGAC...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCATTTTGCAGCTGCAGCTaGCCTGGAGGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSFCSCS*PGGLVP
Trigger: AGGAACTAAACCTCCAGGTCAGCTGCAGCTGCAAAA...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATGTCGATTTCATCATTaGATCGTCGATCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALCRFHH*IVDPLF
Trigger: AAACAAAGGATCGACGATTCAATGATGAAATCGACA...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS-3UTR TCA 90 bp ATTTTCTCCAGGTCAGTCTGTTCTTCAAAGAGGTCATTAACCACCTCTAGCAAAATGAATGGGGAAATCTaGCAGACAGGAAGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: IFSRSVCSSKRSLTTSSKMNGEI*QTGSFL
Trigger: CAGAAAGCTTCCTGTCTGTCAGATTTCCCCATTCAT...TTTGCTAGAGGTGGTTAATGACCTCTTTGAAGAACAGACTGACCTGGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR GCA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCACTGGTTACAAGTTCTaGCACCTGTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVTGYKF*HLSGDL
Trigger: GAGATCTCCAGACAGGTGGCAGAACTTGTAACCAGT...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTAGGCATGCTTCCCAGTaGATCCTTGAGATGTTAGGT +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSRHASQ*ILEMLG
Trigger: ACCTAACATCTCAAGGATGCACTGGGAAGCATGCCT...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTTTTGAACATGTTGCATaGTATGATAGCACATCAAGA +
Preference number: 4 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSFEHVA*YDSTSR
Trigger: TCTTGATGTGCTATCATACCATGCAACATGTTCAAA...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACCTTGAAACCCAGCAGTaGTTAACATCGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDLETQQ*LTSRTS
Trigger: TGATGTTCGCGATGTTAACCACTGCTGGGTTTCAAG...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAACTTGAAACCCAGCAGTaGTTAACATCGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKLETQQ*LTSRTS
Trigger: TGATGTTCGCGATGTTAACCACTGCTGGGTTTCAAG...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp AGTTTATTCTTACCTATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTGCCTTGGAAGGCATTGTTaGTTCCCCTGTGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: SLFLPIVNLASYRICVLCLGRHC*FPCGRG
Trigger: ACCTCGACCACAGGGGAACCAACAATGCCTTCCAAG...GCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAATAGGTAAGAATAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp CCTCAAGACAGGAGAAATAGATGGAGGCAATTACAAACAGCTACTAGATTGATGATTCTTGGGACAGTCTaGCACAAAAAGGCATTCAGG +
Preference number: 4 (lower is better)
Translates to: PQDRRNRWRQLQTATRLMILGTV*HKKAFR
Trigger: CCTGAATGCCTTTTTGTGCCAGACTGTCCCAAGAAT...CATCAATCTAGTAGCTGTTTGTAATTGCCTCCATCTATTTCTCCTGTCTTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATCAATCCATTCCTTCTaGGAGAAAACTTTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALSIHSF*EKTLSV
Trigger: TACAGACAAAGTTTTCTCCCAGAAGGAATGGATTGA...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCAGCCTGCCACCGCGCCTaGCTAATTTGTTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSACHRA*LICFVF
Trigger: AAACACAAAACAAATTAGCCAGGCGCGGTGGCAGGC...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGAAAGATCACTTAAGTTaGAGAGGTCAAGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKKDHLS*RGQGCS
Trigger: ACTGCAGCCTTGACCTCTCCAACTTAAGTGATCTTT...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TTCTCCAGGTCAGTCTGTTCTTCAAAGAGGTCATTAACCACCTCTAGCAAAGCAATTCCCAACACACAGTaGACTTTTCTTGACTCATCT +
Preference number: 4 (lower is better)
Translates to: FSRSVCSSKRSLTTSSKAIPNTQ*TFLDSS
Trigger: AGATGAGTCAAGAAAAGTCCACTGTGTGTTGGGAAT...TGCTTTGCTAGAGGTGGTTAATGACCTCTTTGAAGAACAGACTGACCTGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR TCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTATCGCGAACATCAGCTaGCACACGTTGAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFIANIS*HTLKAC
Trigger: ACATGCCTTCAACGTGTGTCAGCTGATGTTCGCGAT...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTTCTCAAAGTACAGCGTaGGGTCTGTTGCCAATATTG +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSSQSTA*GLLPIL
Trigger: CAATATTGGCAACAGACCTCACGCTGTACTTTGAGA...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp AGTTTATTCTTACCTATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTGCTGCTCTCTCTGCTGCTaGCCATGCTTCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SLFLPIVNLASYRICVLCCSLCC*PCFKVK
Trigger: TTTCACCTTGAAGCATGGTCAGCAGCAGAGAGAGCA...GCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAATAGGTAAGAATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp GTAATCTTAAATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAACTGAGGTCAGGAGTTTaGGATCAGCCTGGCAAACAT +
Preference number: 4 (lower is better)
Translates to: VILNFIPELLTRRTQGSQLRSGV*DQPGKH
Trigger: ATGTTTGCCAGGCTGATCTCAAACTCCTGACCTCAG...TTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATTTAAGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCACTGCCTCACACAGACTaGTTTTCAATTCCCGTTCGT +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSLPHTD*FSIPVR
Trigger: ACGAACGGGAATTGAAAATCAGTCTGTGTGAGGCAG...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAACAAACAGTGTCAGCATaGCATTGGGCATTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKQTVSA*HWALLN
Trigger: ATTTAGCAATGCCCAATGTCATGCTGACACTGTTTG...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTTATAAGTCAATCCACTCCAGTTaGAACCGAGGCAGTTCATCC +
Preference number: 4 (lower is better)
Translates to: PTMYSFLGGELGLISIYKSIHSS*NRGSSS
Trigger: GGATGAACTGCCTCGGTTGCAACTGGAGTGGATTGA...CTTATAAATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp CCTCAAGACAGGAGAAATAGATGGAGGCAATTACAAACAGCTACTAGATTGATGACAAAGGCATGCAGATaGTATCAATCCACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PQDRRNRWRQLQTATRLMTKACR*YQSTPV
Trigger: AACTGGAGTGGATTGATAGCATCTGCATGCCTTTGT...CATCAATCTAGTAGCTGTTTGTAATTGCCTCCATCTATTTCTCCTGTCTTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACACAAAGGCATGCAGATaGTATCAATCCACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDTKACR*YQSTPV
Trigger: AACTGGAGTGGATTGATAGCATCTGCATGCCTTTGT...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR GCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAACCTGATACAAAGGCATaGAGATGCTATCAATCCACT +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKPDTKA*RCYQST
Trigger: AGTGGATTGATAGCATCTGCATGCCTTTGTATCAGG...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACGTTGACCTTCACCAGTaGCTGATACAAAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHVDLHQ*LIQRHA
Trigger: TGCATGCCTTTGTATCAGGCACTGGTGAAGGTCAAC...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CCTCAAGACAGGAGAAATAGATGGAGGCAATTACAAACAGCTACTAGATTGATGCTTCATTTCAGCCCATaGGTGTTCATTAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PQDRRNRWRQLQTATRLMLHFSP*VFIREK
Trigger: CTTTTCCCTAATGAACACGCATGGGCTGAAATGAAG...CATCAATCTAGTAGCTGTTTGTAATTGCCTCCATCTATTTCTCCTGTCTTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTACCCATCAAACACATTTaGTATAGTCCTACTATGTAT +
Preference number: 4 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALPIKHI*YSPTMY
Trigger: ATACATAGTAGGACTATAGCAAATGTGTTTGATGGG...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAATGCTATTGGCAACCATaGAGTGAAGCCAATAAAACG +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKCYWQP*SEANKT
Trigger: CGTTTTATTGGCTTCACTGCATGGTTGCCAATAGCA...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GTAATCTTAAATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAAGATTATTCCCAGCAGTaGAATCTGGGAGATGCCCCT +
Preference number: 4 (lower is better)
Translates to: VILNFIPELLTRRTQGSQDYSQQ*NLGDAP
Trigger: AGGGGCATCTCCCAGATTCCACTGCTGGGAATAATC...TTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATTTAAGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACAATGAATGTCATCGATaGCAAGTTCTGACACCAGAG +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDNECHR*QVLTPE
Trigger: CTCTGGTGTCAGAACTTGCCATCGATGACATTCATT...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCGCCAGCAGTCGTTTTTaGTGTAGCTCTTCCCACTTA +
Preference number: 4 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSASSRF*CSSSHL
Trigger: TAAGTGGGAAGAGCTACACCAAAAACGACTGCTGGC...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp CAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGTCTGTAATGAAGGTTTCAACCTCTAACCTCTaGGGTTGTTGGCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: QNLSIHSFWEKTLSVMKVSTSNL*GCWHQE
Trigger: TTCCTGGTGCCAACAACCCCAGAGGTTAGAGGTTGA...AACCTTCATTACAGACAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAAAGGTTTCTGTCCCACTaGAAGGAAATTGTTTCACAC +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKRFLSH*KEIVSH
Trigger: GTGTGAAACAATTTCCTTCCAGTGGGACAGAAACCT...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GTCTGTTCTTCAAAGAGGTCATTAACCACCTCTAGCAAAGCAAAGCAGCTTTTCAAAAGTATCTACAGCTaGACTTCTTCCCTAGCTACA +
Preference number: 4 (lower is better)
Translates to: VCSSKRSLTTSSKAKQLFKSIYS*TSSLAT
Trigger: TGTAGCTAGGGAAGAAGTCCAGCTGTAGATACTTTT...GAAAAGCTGCTTTGCTTTGCTAGAGGTGGTTAATGACCTCTTTGAAGAACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR TCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACAGTCTGTTTAACACTTaGGCCACTCCAATTATTTGG +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDSLFNT*ATPIIW
Trigger: CCAAATAATTGGAGTGGCTCAAGTGTTAAACAGACT...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGAAAAGTCATCAAAATaGATGTCATCGATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ASQCILEMLGLSELKEQKEKSSK*MSSMAS
Trigger: ACTTGCCATCGATGACATTCATTTTGATGACTTTTC...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR TCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGTCGGTCAGAATGTCTTaGAACCCAGCAGTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLSVRMS*NPAVVN
Trigger: GTTAACCACTGCTGGGTTTCAAGACATTCTGACCGA...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCAGTGTCTCTCTTTTCTaGGCAATTGATGACAGGGTT +
Preference number: 4 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVSVSLF*AIDDRV
Trigger: AACCCTGTCATCAATTGCTCAGAAAAGAGAGACACT...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCTGGATTAGTTGCTTGTaGAATGGCCAACCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVWISCL*NGQPVY
Trigger: ATAGACAGGTTGGCCATTTCACAAGCAACTAATCCA...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp AGTTTATTCTTACCTATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTGCTCAAACAACTCTGGGTaGCTGTCCAGGAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SLFLPIVNLASYRICVLCSNNSG*LSRKVS
Trigger: GGAAACTTTCCTGGACAGGCACCCAGAGTTGTTTGA...GCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAATAGGTAAGAATAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTTTTTCAACCATCTCCTaGTTCCCCTTCCGCATCAAG +
Preference number: 4 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFFSTIS*FPFRIK
Trigger: CTTGATGCGGAAGGGGAAGCAGGAGATGGTTGAAAA...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GTAATCTTAAATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAAACTGGTTACAAGTTCTaGCACCTGTCTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: VILNFIPELLTRRTQGSQTGYKF*HLSGDL
Trigger: GAGATCTCCAGACAGGTGGCAGAACTTGTAACCAGT...TTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATTTAAGATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCCCTGATACAAAGGCATaGAGATGCTATCAATCCACT +
Preference number: 4 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVPDTKA*RCYQST
Trigger: AGTGGATTGATAGCATCTGCATGCCTTTGTATCAGG...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGGTTGACCTTCACCAGTaGCTGATACAAAGGCATGCA +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLVDLHQ*LIQRHA
Trigger: TGCATGCCTTTGTATCAGGCACTGGTGAAGGTCAAC...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTAGGCATGCTTCCCAGTaGATCCTTGAGATGTTAGGT +
Preference number: 4 (lower is better)
Translates to: YSPTMYSFLGGELGLISIRHASQ*ILEMLG
Trigger: ACCTAACATCTCAAGGATGCACTGGGAAGCATGCCT...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCAATGTGGGCTCATCTCTaGCTCACACAGACTGATTTT +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSMWAHL*LTQTDF
Trigger: AAAATCAGTCTGTGTGAGGCAGAGATGAGCCCACAT...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp AGTTTATTCTTACCTATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTGCCACTGTATGGCAGATTaGAATGGTGTTGAACTCCCC +
Preference number: 4 (lower is better)
Translates to: SLFLPIVNLASYRICVLCHCMAD*NGVELP
Trigger: GGGGAGTTCAACACCATTGCAATCTGCCATACAGTG...GCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAATAGGTAAGAATAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCACCTACCCACCAGGATTaGCACTACATTGTAGATTGT +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSPTHQD*HYIVDC
Trigger: ACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGG...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTTATAAGAGTTCCAGTCTGCTATaGACTGAATGGCACCCTTTG +
Preference number: 4 (lower is better)
Translates to: PTMYSFLGGELGLISIYKSSSLL*TEWHPL
Trigger: CAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACT...CTTATAAATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCAATGAATGTCATCGATaGCAAGTTCTGACACCAGAG +
Preference number: 4 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVNECHR*QVLTPE
Trigger: CTCTGGTGTCAGAACTTGCCATCGATGACATTCATT...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGGCCAGCAGTCGTTTTTaGTGTAGCTCTTCCCACTTA +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLASSRF*CSSSHL
Trigger: TAAGTGGGAAGAGCTACACCAAAAACGACTGCTGGC...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAAAAATGTTGCTGTAGATaGACTGGCATCCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKKCCCR*TGIHLS
Trigger: AGACAAATGGATGCCAGTCCATCTACAGCAACATTT...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTAAGCTAAACACGTCTTaGTCCTTTGGTGTGGGGACT +
Preference number: 4 (lower is better)
Translates to: YSPTMYSFLGGELGLISIKLNTS*SFGVGT
Trigger: AGTCCCCACACCAAAGGACCAAGACGTGTTTAGCTT...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp AGTTTATTCTTACCTATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTGCTCTCAAAGTACAGCGTaGGGTCTGTTGCCAATATTG +
Preference number: 4 (lower is better)
Translates to: SLFLPIVNLASYRICVLCSQSTA*GLLPIL
Trigger: CAATATTGGCAACAGACCTCACGCTGTACTTTGAGA...GCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAATAGGTAAGAATAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp CCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTTATAAGCCGATCAAAAATTGCTaGAGGAGTGAGTTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PTMYSFLGGELGLISIYKPIKNC*RSEFEL
Trigger: GAGCTCAAACTCACTCCTTCAGCAATTTTTGATCGG...CTTATAAATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR TCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACGATGTTAGGTCTTTCTaGGCTAAAAGAACAAAAGGA +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDDVRSF*AKRTKG
Trigger: TCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATC...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR TCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCAAAACAGCTACTAGATTaGTGGTTGACATTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSKQLLD*WLTLSG
Trigger: CCCTGACAATGTCAACCATCAATCTAGTAGCTGTTT...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACCTTTGGTGTGGGGACTaGATAAAAGTCAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHLWCGD*IKVSAF
Trigger: AAAAGCACTGACTTTTATTCAGTCCCCACACCAAAG...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAAAGAGTTTGGGCCCGATaGATTATTTTCTTGACAATT +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKRVWAR*IIFLTI
Trigger: AATTGTCAAGAAAATAATGCATCGGGCCCAAACTCT...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCACAAAGGCATGCAGATaGTATCAATCCACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSTKACR*YQSTPV
Trigger: AACTGGAGTGGATTGATAGCATCTGCATGCCTTTGT...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCCTTCATTTCAGCCCATaGGTGTTCATTAGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSLHFSP*VFIREK
Trigger: CTTTTCCCTAATGAACACGCATGGGCTGAAATGAAG...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp CCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTACATACCCATCAAACACATTTaGTATAGTCCTACTATGTAT +
Preference number: 4 (lower is better)
Translates to: PTHQDCHYIVDCAHNSYIPIKHI*YSPTMY
Trigger: ATACATAGTAGGACTATAGCAAATGTGTTTGATGGG...TATGTAGCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGTCTGTAATGAAGGTTTACCTTCCTGTCCACTaGTTCATAGTCATGGAGACA +
Preference number: 4 (lower is better)
Translates to: QNLSIHSFWEKTLSVMKVYLPVH*FIVMET
Trigger: TGTCTCCATGACTATGAAGCAGTGGACAGGAAGGTA...AACCTTCATTACAGACAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACCACTTAGGAAGCTGGTaGAATTTTGGCCTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHHLGSW*NFGLLV
Trigger: TACAAGAAGGCCAAAATTGCACCAGCTTCCTAAGTG...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp TCAAAGAGGTCATTAACCACCTCTAGCAAAGCAAAGCAGCTTTTCCTCACTATCAATGGAAGATACATCTaGATAACCTTGTATATCTGC +
Preference number: 4 (lower is better)
Translates to: SKRSLTTSSKAKQLFLTINGRYI*ITLYIC
Trigger: GCAGATATACAAGGTTATGCAGATGTATCTTCCATT...GATAGTGAGGAAAAGCTGCTTTGCTTTGCTAGAGGTGGTTAATGACCTCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR CCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACGCACATCAAAGAATTTaGAGACCAAGGTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHAHQRI*RPRSSC
Trigger: GCAAGAAGACCTTGGTCTCCAAATTCTTTGATGTGC...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACATCTTATTTATCGCTTaGGCCACACCAATAATCTCA +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDILFIA*ATPIIS
Trigger: TGAGATTATTGGTGTGGCCCAAGCGATAAATAAGAT...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCGTCTCTGTCAGACCCTaGGTCCAGTTTTGTCATAAA +
Preference number: 4 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSVSVRP*VQFCHK
Trigger: TTTATGACAAAACTGGACCCAGGGTCTGACAGAGAC...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CTTGACAATTTTCTCCAGGTCAGTCTGTTCTTCAAAGAGGTCATTAACCACCTCGAAGAAACAGGTTCTTaGTCAAACTTGAGACATTTT +
Preference number: 4 (lower is better)
Translates to: LDNFLQVSLFFKEVINHLEETGS*SNLRHF
Trigger: AAAATGTCTCAAGTTTGACCAAGAACCTGTTTCTTC...GAGGTGGTTAATGACCTCTTTGAAGAACAGACTGACCTGGAGAAAATTGTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR TCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGTCTCCATGCTTTCTTTaGAACTGTTCTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLSPCFL*NCSQHQ
Trigger: CTGATGCTGAGAACAGTTTCAAAGAAAGCATGGAGA...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTAGAACAGATCTTATGTaGAAACCAGATATCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KGYHSPSLELPIKHICYSRTDLM*KPDIWS
Trigger: AGACCAGATATCTGGTTTTCACATAAGATCTGTTCT...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTGCCTCAAAAAGTCGTTaGTCTGCATCATCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: YSPTMYSFLGGELGLISIASKSR*SASSKG
Trigger: ACCTTTTGATGATGCAGATCAACGACTTTTTGAGGC...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTGCCTCAAAAAGTCGTTaGTCTGCATCATCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFASKSR*SASSKG
Trigger: ACCTTTTGATGATGCAGATCAACGACTTTTTGAGGC...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp AGTTTATTCTTACCTATTGTAAACCTGGCTTCCTATAGAATATGCGTTCTTTGCGTCTGTTGCCAATATTaGCTGCTTCAAAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLFLPIVNLASYRICVLCVCCQY*LLQKLH
Trigger: ATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGAC...GCAAAGAACGCATATTCTATAGGAAGCCAGGTTTACAATAGGTAAGAATAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACGGGGAGAACTGGGATTaGTCAGTATTTATAAGGATA +
Preference number: 4 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHGENWD*SVFIRI
Trigger: TATCCTTATAAATACTGATCAATCCCAGTTCTCCCC...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGCCCCAAATTACTAGCTaGAGACAAGGTCATGACAAA +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLPQITS*RQGHDK
Trigger: TTTGTCATGACCTTGTCTTCAGCTAGTAATTTGGGG...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGCAGCAGAGGTGTTCCTaGATGCACATCAAAGAATTT +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLQQRCS*MHIKEF
Trigger: AAATTCTTTGATGTGCATGCAGGAACACCTCTGCTG...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCAGACTGCTTCAAAAGCTaGATAAGGTCACTATATTCC +
Preference number: 4 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSDCFKS*IRSLYS
Trigger: GGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTC...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCGTTGCCAATATTGACTaGTTCAAAAGCTGCATAAGG +
Preference number: 4 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSVANID*FKSCIR
Trigger: CCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAAC...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGGAATTGTCTACTGTGTaGCAGGAAAACAATGTCGCA +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLELSTV*QENNVA
Trigger: TGCGACATTGTTTTCCTGGCACACAGTAGACAATTC...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTCATTTCAGCAGAGTTTaGGCCCGATGCATTATTTTC +
Preference number: 4 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFHFSRV*ARCIIF
Trigger: GAAAATAATGCATCGGGCCCAAACTCTGCTGAAATG...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACTTTGAACATGTTGCATaGTATGATAGCACATCAAGA +
Preference number: 4 (lower is better)
Translates to: QCILEMLGLSELKEQKDDFEHVA*YDSTSR
Trigger: TCTTGATGTGCTATCATACCATGCAACATGTTCAAA...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTAATGAATGTCATCGATaGCAAGTTCTGACACCAGAG +
Preference number: 4 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFNECHR*QVLTPE
Trigger: CTCTGGTGTCAGAACTTGCCATCGATGACATTCATT...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAACGAAATATATCACGATaGTTTTTGATGTTCCAATCG +
Preference number: 4 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKRNISR*FLMFQS
Trigger: CGATTGGAACATCAAAAACCATCGTGATATATTTCG...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CCA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCCACAGAAAAAGCAACTaGATTCTGGCAGCATTAATA +
Preference number: 4 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFHRKSN*ILAALI
Trigger: TATTAATGCTGCCAGAATCCAGTTGCTTTTTCTGTG...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGTTCAATTCCCGTTCGTaGTATAAACATGATGTGGCA +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLFNSRS*YKHDVA
Trigger: TGCCACATCATGTTTATATCACGAACGGGAATTGAA...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR GCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTCAACCAGCTCAGCAATaGTGTTATTTATTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFQPAQQ*CYLLAS
Trigger: ACTGGCTAATAAATAACAGCATTGCTGAGCTGGTTG...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp GTAATCTTAAATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAACATTGGAGATATCTTTaGCCAATTCCAGAAAGAACT +
Preference number: 4 (lower is better)
Translates to: VILNFIPELLTRRTQGSQHWRYL*PIPERT
Trigger: AGTTCTTTCTGGAATTGGTCAAAGATATCTCCAATG...TTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATTTAAGATTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR TCA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTCAGGACTTCTTCACTTaGTCATACATAATTGTGTTG +
Preference number: 4 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFQDFFT*SYIIVL
Trigger: CAACACAATTATGTATGATCAAGTGAAGAAGTCCTG...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGGAAAAGTCATCAAAATaGATGTCATCGATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLEKSSK*MSSMAS
Trigger: ACTTGCCATCGATGACATTCATTTTGATGACTTTTC...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR TCA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCGATGTTAGGTCTTTCTaGGCTAAAAGAACAAAAGGA +
Preference number: 4 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSDVRSF*AKRTKG
Trigger: TCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATC...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR GCA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCAGAATATGCGTTCTTTaGCCAGACTGTTATTTCTTA +
Preference number: 4 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSRICVL*PDCYFL
Trigger: TAAGAAATAACAGTCTGGGCAAAGAACGCATATTCT...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR GCA 90 bp GTAATCTTAAATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAAGATTATATGGATAACTaGATATGCCTCACATTCTTG +
Preference number: 4 (lower is better)
Translates to: VILNFIPELLTRRTQGSQDYMDN*ICLTFL
Trigger: CAAGAATGTGAGGCATATGCAGTTATCCATATAATC...TTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATTTAAGATTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CCA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGCGAAATATATCACGATaGTTTTTGATGTTCCAATCG +
Preference number: 4 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLRNISR*FLMFQS
Trigger: CGATTGGAACATCAAAAACCATCGTGATATATTTCG...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS GCA 90 bp CTTCTCTGGCTCAGAGTGGCTGGCGCCGACCCCACCCCGTGGTCCTaGTACTCCTGCTCCGCACAGGTGCCCAGCACTGAGCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LLWLRVAGADPTPWS*YSCSAQVPSTELPP
Trigger: CGGCGGCAGCTCAGTGCTGGGCACCTGTGCGGAGCAGGAGTAGCAGGACCACGGGGTGGGGTCGGCGCCAGCCACTCTGAGCCAGAGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 90 bp CGTGGTCCTGCTACTCCTGCTCCGCACAGGTGCCCAGCACTGAGCTaGCGCCGCTGCCCCGGCTCCTGTTCCGGAAACCCGAGCTATCGC +
Preference number: 5 (lower is better)
Translates to: RGPATPAPHRCPALS*RRCPGSCSGNPSYR
Trigger: GCGATAGCTCGGGTTTCCGGAACAGGAGCCGGGGCAGCGGCGGCAGCTCAGTGCTGGGCACCTGTGCGGAGCAGGAGTAGCAGGACCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 90 bp CCCTTCCTTCTCTGGCTCAGAGTGGCTGGCGCCGACCCCACCCCGTaGTCCTGCTACTCCTGCTCCGCACAGGTGCCCAGCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: PFLLWLRVAGADPTP*SCYSCSAQVPSTEL
Trigger: CAGCTCAGTGCTGGGCACCTGTGCGGAGCAGGAGTAGCAGGACCACGGGGTGGGGTCGGCGCCAGCCACTCTGAGCCAGAGAAGGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 90 bp GCTCTTTCTGAGAAGCTCTCCGCTGCAGGTTCCCATCGCCCCTGCTaGCACCGGCCCAGCTGGGACTCAAGGGAACCCCACCACAGTCCC +
Preference number: 5 (lower is better)
Translates to: ALSEKLSAAGSHRPC*HRPSWDSREPHHSP
Trigger: GGGACTGTGGTGGGGTTCCCTTGAGTCCCAGCTGGGCCGGTGGCAGCAGGGGCGATGGGAACCTGCAGCGGAGAGCTTCTCAGAAAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 90 bp CGCCACCTCCCCTGGAGATTATTCCCAGCAGTGGAATCTGGGAGATaGCCCTTCCTTCTCTGGCTCAGAGTGGCTGGCGCCGACCCCACC +
Preference number: 5 (lower is better)
Translates to: RHLPWRLFPAVESGR*PFLLWLRVAGADPT
Trigger: GGTGGGGTCGGCGCCAGCCACTCTGAGCCAGAGAAGGAAGGGGCATCTCCCAGATTCCACTGCTGGGAATAATCTCCAGGGGAGGTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 90 bp GCTGGCTGTGGGCAGAGCCATTTGGTCCAGTGCCACCACCAACGCTaGTGCCACCTCTGCAGGTGCTGTGAGCCAAGCTGCTGGTACCAG +
Preference number: 5 (lower is better)
Translates to: AGCGQSHLVQCHHQR*CHLCRCCEPSCWYQ
Trigger: CTGGTACCAGCAGCTTGGCTCACAGCACCTGCAGAGGTGGCAGCAGCGTTGGTGGTGGCACTGGACCAAATGGCTCTGCCCACAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 90 bp CAGAGCCATTTGGTCCAGTGCCACCACCAACGCTGCTGCCACCTCTaGAGGTGCTGTGAGCCAAGCTGCTGGTACCAGCCAAAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QSHLVQCHHQRCCHL*RCCEPSCWYQPKRA
Trigger: GGCCCTCTTTGGCTGGTACCAGCAGCTTGGCTCACAGCACCTGCAGAGGTGGCAGCAGCGTTGGTGGTGGCACTGGACCAAATGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 90 bp CACCAACGCTGCTGCCACCTCTGCAGGTGCTGTGAGCCAAGCTGCTaGTACCAGCCAAAGAGGGCCTTGGACCTAAAGCCCCCTGACCCT +
Preference number: 5 (lower is better)
Translates to: HQRCCHLCRCCEPSC*YQPKRALDLKPPDP
Trigger: AGGGTCAGGGGGCTTTAGGTCCAAGGCCCTCTTTGGCTGGTACCAGCAGCTTGGCTCACAGCACCTGCAGAGGTGGCAGCAGCGTTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS TCA 90 bp ACGTGGATGGCCTTGGAGCGGGCAAAACTCTTCCTTAGCTCTTTCTaGGAAGCTCTCCGCTGCAGGTTCCCATCGCCCCTGCTGCCACCG +
Preference number: 5 (lower is better)
Translates to: TWMALERAKLFLSSF*EALRCRFPSPLLPP
Trigger: CGGTGGCAGCAGGGGCGATGGGAACCTGCAGCGGAGAGCTTCTCAGAAAGAGCTAAGGAAGAGTTTTGCCCGCTCCAAGGCCATCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 90 bp AGTTCAGCGCCACCTCCCCTGGAGATTATTCCCAGCAGTGGAATCTaGGAGATGCCCCTTCCTTCTCTGGCTCAGAGTGGCTGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: SSAPPPLEIIPSSGI*EMPLPSLAQSGWRR
Trigger: TCGGCGCCAGCCACTCTGAGCCAGAGAAGGAAGGGGCATCTCCCAGATTCCACTGCTGGGAATAATCTCCAGGGGAGGTGGCGCTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 90 bp CCAAAGTCCAGGCGGGAGGCTGCCATGGTCCCAGACAGCTTTCCTTaGCTGTTTACACGTGAACCAAATGTTTTCCTGCCCCGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PKSRREAAMVPDSFP*LFTREPNVFLPRGL
Trigger: GAGGCCTCGGGGCAGGAAAACATTTGGTTCACGTGTAAACAGGCAAGGAAAGCTGTCTGGGACCATGGCAGCCTCCCGCCTGGACTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 90 bp TATTCCCAGTTCAGCGCCACCTCCCCTGGAGATTATTCCCAGCAGTaGAATCTGGGAGATGCCCCTTCCTTCTCTGGCTCAGAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: YSQFSATSPGDYSQQ*NLGDAPSFSGSEWL
Trigger: CAGCCACTCTGAGCCAGAGAAGGAAGGGGCATCTCCCAGATTCCACTGCTGGGAATAATCTCCAGGGGAGGTGGCGCTGAACTGGGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS TCA 90 bp GGAGGCTGCCATGGTCCCAGACAGCTTTCCTTGCCTGTTTACACGTaGACCAAATGTTTTCCTGCCCCGAGGCCTCTAGCTGTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GGCHGPRQLSLPVYT*TKCFPAPRPLAVPA
Trigger: TGCAGGAACAGCTAGAGGCCTCGGGGCAGGAAAACATTTGGTTCACGTGTAAACAGGCAAGGAAAGCTGTCTGGGACCATGGCAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 90 bp CCAGGAAAGTTTCCACCTCCCCAAAGTCCAGGCGGGAGGCTGCCATaGTCCCAGACAGCTTTCCTTGCCTGTTTACACGTGAACCAAATG +
Preference number: 5 (lower is better)
Translates to: PGKFPPPQSPGGRLP*SQTAFLACLHVNQM
Trigger: CATTTGGTTCACGTGTAAACAGGCAAGGAAAGCTGTCTGGGACCATGGCAGCCTCCCGCCTGGACTTTGGGGAGGTGGAAACTTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 90 bp GAGCCCGGGAGGTCACCTGTTCATCGTAGGTCCTGTTCACGTGGATaGCCTTGGAGCGGGCAAAACTCTTCCTTAGCTCTTTCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: EPGRSPVHRRSCSRG*PWSGQNSSLALSEK
Trigger: CTTCTCAGAAAGAGCTAAGGAAGAGTTTTGCCCGCTCCAAGGCCATCCACGTGAACAGGACCTACGATGAACAGGTGACCTCCCGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGGCTTGGAAGGCATTGTaGGTTCCCCTGTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWAWKAL*VPLWSR
Trigger: CCTCGACCACAGGGGAACCAACAATGCCTTCCAAGC...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCAGAGGTTCCATAGAGTaGGGCCAGGGCAGAGCCACT +
Preference number: 5 (lower is better)
Translates to: AGLKMALQAVVILQLQLTRGSIE*GQGRAT
Trigger: AGTGGCTCTGCCCTGGCCCAACTCTATGGAACCTCT...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGGAGATCTCCCACGGTTaGGTCACGGCTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWEISHG*VTAPRS
Trigger: TGACCTTGGAGCCGTGACCAAACCGTGGGAGATCTC...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS TCA 90 bp GACATAGCCAATGATACCTTTGCCCCAGGGGACCTGCACCTCATTTaGGTTCTCTGTGCTGCTGCAAGGCAGCAGAGGTGTTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: DIANDTFAPGDLHLI*VLCAAARQQRCSCM
Trigger: CATGCAGGAACACCTCTGCTGCCTTGCAGCAGCACAGAGAACTCAAATGAGGTGCAGGTCCCCTGGGGCAAAGGTATCATTGGCTATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 90 bp GGGAGGTCACCTGTTCATCGTAGGTCCTGTTCACGTGGATGGCCTTaGAGCGGGCAAAACTCTTCCTTAGCTCTTTCTGAGAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GRSPVHRRSCSRGWP*SGQNSSLALSEKLS
Trigger: GGAGAGCTTCTCAGAAAGAGCTAAGGAAGAGTTTTGCCCGCTCCAAGGCCATCCACGTGAACAGGACCTACGATGAACAGGTGACCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTGTGGGCAGAGCCATTaGGTCCAGTGCCACCACCAA +
Preference number: 5 (lower is better)
Translates to: TSFFVLPVALSAADHASRCGQSH*VQCHHQ
Trigger: TTGGTGGTGGCACTGGACCAAATGGCTCTGCCCACA...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGGGACCTGCACCTCATTaGAGTTCTCTGTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWGPAPH*SSLCCC
Trigger: GCAGCAGCACAGAGAACTCAAATGAGGTGCAGGTCC...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGCTTGGAAGGCATTGTaGGTTCCCCTGTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQAWKAL*VPLWSR
Trigger: CCTCGACCACAGGGGAACCAACAATGCCTTCCAAGC...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAAGAGGTTCCATAGAGTaGGGCCAGGGCAGAGCCACT +
Preference number: 5 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQRGSIE*GQGRAT
Trigger: AGTGGCTCTGCCCTGGCCCAACTCTATGGAACCTCT...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGAGATCTCCCACGGTTaGGTCACGGCTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQEISHG*VTAPRS
Trigger: TGACCTTGGAGCCGTGACCAAACCGTGGGAGATCTC...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTGAGATCTCCCACGGTTaGGTCACGGCTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGEISHG*VTAPRS
Trigger: TGACCTTGGAGCCGTGACCAAACCGTGGGAGATCTC...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGGAGATCTCCCACGGTTaGGTCACGGCTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: TSFFVLPVALSAADHASREISHG*VTAPRS
Trigger: TGACCTTGGAGCCGTGACCAAACCGTGGGAGATCTC...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATTCTCTCCCGATCTCCTaGTTCGAAGAACTCACTGGT +
Preference number: 5 (lower is better)
Translates to: PCPTSFFVLPVALSAADHSLPIS*FEELTG
Trigger: ACCAGTGAGTTCTTCGAACAAGGAGATCGGGAGAGA...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTGAAGGAGTGAGTTaGAGCTCTAATCTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: PCPTSFFVLPVALSAADHAEGVS*SSNLSR
Trigger: TCGGGAGAGATTAGAGCTCAAACTCACTCCTTCAGC...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGCAGGCTGTAGTCATTTaGCAGCTGCAGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: LKMALQAVVILQLQLTWRQAVVI*QLQLTW
Trigger: CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTG...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGCAGGCTGTAGTCATTTaGCAGCTGCAGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWQAVVI*QLQLTW
Trigger: CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTG...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS GCA 90 bp CAGACAGCTTTCCTTGCCTGTTTACACGTGAACCAAATGTTTTCCTaGCCCGAGGCCTCTAGCTGTTCCTGCACATGTTCACCCCCACCA +
Preference number: 5 (lower is better)
Translates to: QTAFLACLHVNQMFS*PEASSCSCTCSPPP
Trigger: TGGTGGGGGTGAACATGTGCAGGAACAGCTAGAGGCCTCGGGGCAGGAAAACATTTGGTTCACGTGTAAACAGGCAAGGAAAGCTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 90 bp CATCTCCTGCTTCCCCTTCCGCATCAAGTAATCTTCAAACAACTCTaGGTGCCTGTCCAGGAAAGTTTCCACCTCCCCAAAGTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: HLLLPLPHQVIFKQL*VPVQESFHLPKVQA
Trigger: CGCCTGGACTTTGGGGAGGTGGAAACTTTCCTGGACAGGCACCCAGAGTTGTTTGAAGATTACTTGATGCGGAAGGGGAAGCAGGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACGGGAGGATGAGGCAGTaGAGGCCAGCAGTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHGRMRQ*RPAVVF
Trigger: AAAAACGACTGCTGGCCTCAACTGCCTCATCCTCCC...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGGGAGGATGAGGCAGTaGAGGCCAGCAGTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRGRMRQ*RPAVVF
Trigger: AAAAACGACTGCTGGCCTCAACTGCCTCATCCTCCC...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGCCTGAGGTCAGGAGTTaGAGATCAGCCTGGCAAACA +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWPEVRS*RSAWQT
Trigger: TGTTTGCCAGGCTGATCTCAAACTCCTGACCTCAGG...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS TCA 90 bp CTCTTAGCTTGGAAGGCATTGTTGGTTCCCCTGTGGTCGAGGTCATaGCACAGGCATCCCACAATCACCGCTAAAATTTCCACCTCGGTC +
Preference number: 5 (lower is better)
Translates to: LLAWKALLVPLWSRS*HRHPTITAKISTSV
Trigger: GACCGAGGTGGAAATTTTAGCGGTGATTGTGGGATGCCTGTGTCATGACCTCGACCACAGGGGAACCAACAATGCCTTCCAAGCTAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS GCA 90 bp TACCTTTGCCCCAGGGGACCTGCACCTCATTTGAGTTCTCTGTGCTaGTGCAAGGCAGCAGAGGTGTTCCTGCATGCACATCAAAGAATT +
Preference number: 5 (lower is better)
Translates to: YLCPRGPAPHLSSLC*CKAAEVFLHAHQRI
Trigger: AATTCTTTGATGTGCATGCAGGAACACCTCTGCTGCCTTGCAGCAGCACAGAGAACTCAAATGAGGTGCAGGTCCCCTGGGGCAAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 90 bp GGGGGTGCTCCAAAGAAGAGCTGCAGATTGCTTGTGCCAGGTTGGTaGTTCACAGCTCCAGGTGATGTATTTCTGACCTTCTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GGAPKKSCRLLVPGW*FTAPGDVFLTFSSK
Trigger: CTTTGAGGAGAAGGTCAGAAATACATCACCTGGAGCTGTGAACCACCAACCTGGCACAAGCAATCTGCAGCTCTTCTTTGGAGCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACTCACTGGAAGGCCTGTaGAAGCAACCAGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHSLEGL*KQPAQQ
Trigger: TTGCTGAGCTGGTTGCTTCAACAGGCCTTCCAGTGA...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCGACACCAGAGGGATGTaGGCTGCCTTAAACTTGTCA +
Preference number: 5 (lower is better)
Translates to: AGLKMALQAVVILQLQLTDTRGM*AALNLS
Trigger: TGACAAGTTTAAGGCAGCCAACATCCCTCTGGTGTC...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGGACACCAGAGGGATGTaGGCTGCCTTAAACTTGTCA +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWDTRGM*AALNLS
Trigger: TGACAAGTTTAAGGCAGCCAACATCCCTCTGGTGTC...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGAGAGCCACTCTTAGCTaGGAAGGCATTGTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: LKMALQAVVILQLQLTWRRATLS*EGIVGS
Trigger: GGAACCAACAATGCCTTCCAAGCTAAGAGTGGCTCT...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAGAGGTTCCATAGAGTaGGGCCAGGGCAGAGCCACT +
Preference number: 5 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSRGSIE*GQGRAT
Trigger: AGTGGCTCTGCCCTGGCCCAACTCTATGGAACCTCT...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGGTCTGTTGCCAATATaGACTGCTTCAAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PCPTSFFVLPVALSAADHGLLPI*TASKAA
Trigger: TGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACC...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGTCTCTCCCGATCTCCTaGTTCGAAGAACTCACTGGT +
Preference number: 5 (lower is better)
Translates to: LKMALQAVVILQLQLTWRSLPIS*FEELTG
Trigger: ACCAGTGAGTTCTTCGAACAAGGAGATCGGGAGAGA...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CAA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTCTCTCCCGATCTCCTaGTTCGAAGAACTCACTGGT +
Preference number: 5 (lower is better)
Translates to: AGLKMALQAVVILQLQLTSLPIS*FEELTG
Trigger: ACCAGTGAGTTCTTCGAACAAGGAGATCGGGAGAGA...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CAA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGACTGTCCACAGGTCCTaGGATCCAAAACAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRTVHRS*DPKQSP
Trigger: AGGGGACTGTTTTGGATCCAAGGACCTGTGGACAGT...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTACTGTCCACAGGTCCTaGGATCCAAAACAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PRAFISAHACSLGKSEGPTVHRS*DPKQSP
Trigger: AGGGGACTGTTTTGGATCCAAGGACCTGTGGACAGT...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACACTGTCCACAGGTCCTaGGATCCAAAACAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHTVHRS*DPKQSP
Trigger: AGGGGACTGTTTTGGATCCAAGGACCTGTGGACAGT...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACAGGCTGGAGAATTGCTaGAACCCAGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: CWTENGPSGCSHFAAAADRLENC*NPGSRG
Trigger: ACCTCTGCTTCCTGGGTTCAAGCAATTCTCCAGCCT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTGGTGTTGAACTCCCCTaGCTACCAGTGGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: PRAFISAHACSLGKSEGPGVELP*LPVDVA
Trigger: AGCAACATCCACTGGTAGCAAGGGGAGTTCAACACC...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGCATCAGCACTGCACTTaGGGGACATCAATTCAAAGG +
Preference number: 5 (lower is better)
Translates to: LKMALQAVVILQLQLTWRHQHCT*GTSIQR
Trigger: CCTTTGAATTGATGTCCCCAAAGTGCAGTGCTGATG...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGTCACTGGAAGGCCTGTaGAAGCAACCAGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: DIAGLKMALQAVVILQLQSLEGL*KQPAQQ
Trigger: TTGCTGAGCTGGTTGCTTCAACAGGCCTTCCAGTGA...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAAGGCATGTCTCCAGTaGTGGTATAGAACCATCCGA +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWKACLQ*WYRTIR
Trigger: TCGGATGGTTCTATACCACAACTGGAGACATGCCTT...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGAGAGCCACTCTTAGCTaGGAAGGCATTGTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRRATLS*EGIVGS
Trigger: GGAACCAACAATGCCTTCCAAGCTAAGAGTGGCTCT...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAAGAGGTTCCATAGAGTaGGGCCAGGGCAGAGCCACT +
Preference number: 5 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALRGSIE*GQGRAT
Trigger: AGTGGCTCTGCCCTGGCCCAACTCTATGGAACCTCT...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACATTGTGACCCTCACTTaGAAGGATCATCACGGCGTG +
Preference number: 5 (lower is better)
Translates to: CWTENGPSGCSHFAAAADIVTLT*KDHHGV
Trigger: CACGCCGTGATGATCCTTCAAAGTGAGGGTCACAAT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACATTGTGACCCTCACTTaGAAGGATCATCACGGCGTG +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHIVTLT*KDHHGV
Trigger: CACGCCGTGATGATCCTTCAAAGTGAGGGTCACAAT...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTTCTCTCCCGATCTCCTaGTTCGAAGAACTCACTGGT +
Preference number: 5 (lower is better)
Translates to: PRAFISAHACSLGKSEGPSLPIS*FEELTG
Trigger: ACCAGTGAGTTCTTCGAACAAGGAGATCGGGAGAGA...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTGCTGAAGGAGTGAGTTaGAGCTCTAATCTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: PRAFISAHACSLGKSEGPAEGVS*SSNLSR
Trigger: TCGGGAGAGATTAGAGCTCAAACTCACTCCTTCAGC...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGATCAATCCACTCCAGTaGCAACCGAGGCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRINPLQ*QPRQFI
Trigger: GATGAACTGCCTCGGTTGCAACTGGAGTGGATTGAT...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000436700.5
CDS-3UTR CAA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGCCCTACCCACCAGGATaGCCACTACATTGTAGATTG +
Preference number: 5 (lower is better)
Translates to: TSFFVLPVALSAADHASRPYPPG*PLHCRL
Trigger: CAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGG...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 90 bp TCAAGGCAGACACAGACAGGGTTCTTTCCATCATCAATAAGGGGGTaGTCCAAAGAAGAGCTGCAGATTGCTTGTGCCAGGTTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SRQTQTGFFPSSIRG*SKEELQIACARLVV
Trigger: AACCACCAACCTGGCACAAGCAATCTGCAGCTCTTCTTTGGAGCACCCCCTTATTGATGATGGAAAGAACCCTGTCTGTGTCTGCCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CCA 90 bp ACACTGGCAGGGGAGGATGAGGCAGTTGAGGCCAGCAGTCGTTTTTaGTGTAGCTCTTCCCACTTACTTCTGTTTGTAGCTACTGAATCT +
Preference number: 5 (lower is better)
Translates to: TLAGEDEAVEASSRF*CSSSHLLLFVATES
Trigger: AGATTCAGTAGCTACAAACAGAAGTAAGTGGGAAGAGCTACACCAAAAACGACTGCTGGCCTCAACTGCCTCATCCTCCCCTGCCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000436700.5
ENST00000478646.5
ENST00000488399.5
CDS-3UTR CAA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAACATCAGCACTGCACTTaGGGGACATCAATTCAAAGG +
Preference number: 5 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQHQHCT*GTSIQR
Trigger: CCTTTGAATTGATGTCCCCAAAGTGCAGTGCTGATG...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGGACACCAGAGGGATGTaGGCTGCCTTAAACTTGTCA +
Preference number: 5 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRDTRGM*AALNLS
Trigger: TGACAAGTTTAAGGCAGCCAACATCCCTCTGGTGTC...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGAAGGCATGTCTCCAGTaGTGGTATAGAACCATCCGA +
Preference number: 5 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRKACLQ*WYRTIR
Trigger: TCGGATGGTTCTATACCACAACTGGAGACATGCCTT...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGAGAGCCACTCTTAGCTaGGAAGGCATTGTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRRATLS*EGIVGS
Trigger: GGAACCAACAATGCCTTCCAAGCTAAGAGTGGCTCT...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGGGGTCTGTTGCCAATATaGACTGCTTCAAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LKMALQAVVILQLQLTWRGLLPI*TASKAA
Trigger: TGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACC...CCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGGGTCTGTTGCCAATATaGACTGCTTCAAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWGLLPI*TASKAA
Trigger: TGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACC...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTTCTCTCCCGATCTCCTaGTTCGAAGAACTCACTGGT +
Preference number: 5 (lower is better)
Translates to: HCWTENGPSGCSHFAAAASLPIS*FEELTG
Trigger: ACCAGTGAGTTCTTCGAACAAGGAGATCGGGAGAGA...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CAA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGGCTGAAGGAGTGAGTTaGAGCTCTAATCTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: DIAGLKMALQAVVILQLQAEGVS*SSNLSR
Trigger: TCGGGAGAGATTAGAGCTCAAACTCACTCCTTCAGC...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CAA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAGGGAGGATGAGGCAGTaGAGGCCAGCAGTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALGRMRQ*RPAVVF
Trigger: AAAAACGACTGCTGGCCTCAACTGCCTCATCCTCCC...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATTACAAATTAGGATTCTaGGGACAGTCTGGCACAAAA +
Preference number: 5 (lower is better)
Translates to: PCPTSFFVLPVALSAADHYKLGF*GQSGTK
Trigger: TTTTGTGCCAGACTGTCCCAAGAATCCTAATTTGTA...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp TTTCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGCAGCTTCTCAGGAGGTaGAGGCTGGAGAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: FPLTTCLGPCLSFTGVLTQLLRR*RLENCL
Trigger: CAAGCAATTCTCCAGCCTCAACCTCCTGAGAAGCTG...CGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 90 bp CTTTCCATCATCAATAAGGGGGTGCTCCAAAGAAGAGCTGCAGATTaGTTGTGCCAGGTTGGTGGTTCACAGCTCCAGGTGATGTATTTC +
Preference number: 5 (lower is better)
Translates to: LSIINKGVLQRRAAD*LCQVGGSQLQVMYF
Trigger: GAAATACATCACCTGGAGCTGTGAACCACCAACCTGGCACAAGCAATCTGCAGCTCTTCTTTGGAGCACCCCCTTATTGATGATGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CCA 90 bp ACTTCTTCCCTAGCTACATCCCAAGAATGTCTGTGGCCTGATGAATaGGGAAATCTGACAGACAGGAAGCTTTCTGGCTGTTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: TSSLATSQECLWPDE*GNLTDRKLSGCSMA
Trigger: AGCCATGGAACAGCCAGAAAGCTTCCTGTCTGTCAGATTTCCCCATTCATCAGGCCACAGACATTCTTGGGATGTAGCTAGGGAAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR CAA 90 bp CCCTGCCCCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATCGATGCATTATTTTCTaGACAATTTTCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PCPTSFFVLPVALSAADHRCIIF*TIFSRS
Trigger: TGACCTGGAGAAAATTGTCAAGAAAATAATGCATCG...ATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGGGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp GCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCGACACCAGAGGGATGTaGGCTGCCTTAAACTTGTCA +
Preference number: 5 (lower is better)
Translates to: AVPTHQDCHYIVDCAHNSDTRGM*AALNLS
Trigger: TGACAAGTTTAAGGCAGCCAACATCCCTCTGGTGTC...GCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp CCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTGGTCTGTTGCCAATATaGACTGCTTCAAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PLSLSFPLLSLLLTMLQGGLLPI*TASKAA
Trigger: TGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACC...ACCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp GCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCACTGAATGGCACCCTTaGCAGTATGTGAAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: AVPTHQDCHYIVDCAHNSTEWHP*QYVKLS
Trigger: GGACAGCTTCACATACTGCAAAGGGTGCCATTCAGT...GCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTTCATTACAGTGGCATaGCCAGAGTTTTTAGGGTCC +
Preference number: 5 (lower is better)
Translates to: TSFFVLPVALSAADHASRFITVA*PEFLGS
Trigger: GGACCCTAAAAACTCTGGCAATGCCACTGTAATGAA...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCCAGCCAAAGAGGGCCTaGGACCTAAAGCCCCCTGAC +
Preference number: 5 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVQPKRA*DLKPPD
Trigger: GTCAGGGGGCTTTAGGTCCAAGGCCCTCTTTGGCTG...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp CCAAAACAGTCCCCTACCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGTTTCATATTCTTTCCTaGAGGCAGCAAAGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: PKQSPTQSLHFSPCVFIRFHILS*RQQRAE
Trigger: CTCAGCTCTTTGCTGCCTCAAGGAAAGAATATGAAA...CCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGGTAGGGGACTGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACACATTTCAGCAGAGTTaGGGCCCGATGCATTATTTT +
Preference number: 5 (lower is better)
Translates to: CWTENGPSGCSHFAAAADTFQQS*GPMHYF
Trigger: AAAATAATGCATCGGGCCCAAACTCTGCTGAAATGT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACACATTTCAGCAGAGTTaGGGCCCGATGCATTATTTT +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHTFQQS*GPMHYF
Trigger: AAAATAATGCATCGGGCCCAAACTCTGCTGAAATGT...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGTTCTCCATGCTTTCTTaGAAACTGTTCTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWFSMLS*KLFSAS
Trigger: TGATGCTGAGAACAGTTTCAAAGAAAGCATGGAGAA...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCCCAATTATTTGGTGGTaGCTATTCCAAATAGGGACA +
Preference number: 5 (lower is better)
Translates to: AGLKMALQAVVILQLQLTPIIWW*LFQIGT
Trigger: TGTCCCTATTTGGAATAGCAACCACCAAATAATTGG...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp GCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCAGCCACTCCAATTATTaGGTGGTTGCTATTCCAAAT +
Preference number: 5 (lower is better)
Translates to: AGLKMALQAVVILQLQLTSHSNY*VVAIPN
Trigger: ATTTGGAATAGCAACCACCAAATAATTGGAGTGGCT...GGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp GGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCTGGAGCCACTCCAATTATTaGGTGGTTGCTATTCCAAAT +
Preference number: 5 (lower is better)
Translates to: GLKMALQAVVILQLQLTWSHSNY*VVAIPN
Trigger: ATTTGGAATAGCAACCACCAAATAATTGGAGTGGCT...CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTAGCCTCAAAAAGTCGTaGATCTGCATCATCAAAAGG +
Preference number: 5 (lower is better)
Translates to: PRAFISAHACSLGKSEGPSLKKS*ICIIKR
Trigger: CCTTTTGATGATGCAGATCAACGACTTTTTGAGGCT...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAAGAGCCACTCTTAGCTaGGAAGGCATTGTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALRATLS*EGIVGS
Trigger: GGAACCAACAATGCCTTCCAAGCTAAGAGTGGCTCT...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAATTGTGACCCTCACTTaGAAGGATCATCACGGCGTG +
Preference number: 5 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALIVTLT*KDHHGV
Trigger: CACGCCGTGATGATCCTTCAAAGTGAGGGTCACAAT...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAGCTGAAGGAGTGAGTTaGAGCTCTAATCTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALAEGVS*SSNLSR
Trigger: TCGGGAGAGATTAGAGCTCAAACTCACTCCTTCAGC...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTAATCAATCCACTCCAGTaGCAACCGAGGCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALINPLQ*QPRQFI
Trigger: GATGAACTGCCTCGGTTGCAACTGGAGTGGATTGAT...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGGGAGGATGAGGCAGTaGAGGCCAGCAGTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: ASQCILEMLGLSELKEQKGRMRQ*RPAVVF
Trigger: AAAAACGACTGCTGGCCTCAACTGCCTCATCCTCCC...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CAA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGCAGGCTGTAGTCATTTaGCAGCTGCAGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: ASQCILEMLGLSELKEQKQAVVI*QLQLTW
Trigger: CCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTG...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CAA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGGGGGGAGAACTGGGATaGATCAGTATTTATAAGGAT +
Preference number: 5 (lower is better)
Translates to: TSFFVLPVALSAADHASRGGELG*ISIYKD
Trigger: ATCCTTATAAATACTGATCAATCCCAGTTCTCCCCC...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACGGGGGAGAACTGGGATaGATCAGTATTTATAAGGAT +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHGGELG*ISIYKD
Trigger: ATCCTTATAAATACTGATCAATCCCAGTTCTCCCCC...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp GGAGGGAGTTCCAGTCTGCTATGCACTGAATGGCACCCTTTGCAGTATGTGAAGCTAGCCCAATGTTCTTaGGATAACACATACCATGTC +
Preference number: 5 (lower is better)
Translates to: GGSSSLLCTEWHPLQYVKLAQCS*DNTYHV
Trigger: GACATGGTATGTGTTATCCAAAGAACATTGGGCTAG...CTTCACATACTGCAAAGGGTGCCATTCAGTGCATAGCAGACTGGAACTCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACAAATTTCACCACCTGTaGAGAGAGGCAATCCACAAA +
Preference number: 5 (lower is better)
Translates to: CWTENGPSGCSHFAAAADKFHHL*REAIHK
Trigger: TTTGTGGATTGCCTCTCTCAACAGGTGGTGAAATTT...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389683.7
CDS TCA 90 bp GAAACCCAGCAGTGGTTAACATCGCGAACATCAGCTGACACACGTTaGAGGCATGTCTCCAGTTGTGGTATAGAACCATCCGATAGTTTT +
Preference number: 5 (lower is better)
Translates to: ETQQWLTSRTSADTR*RHVSSCGIEPSDSF
Trigger: AAAACTATCGGATGGTTCTATACCACAACTGGAGACATGCCTTCAACGTGTGTCAGCTGATGTTCGCGATGTTAACCACTGCTGGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS-3UTR CAA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGACATTTCAGCAGAGTTaGGGCCCGATGCATTATTTT +
Preference number: 5 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRTFQQS*GPMHYF
Trigger: AAAATAATGCATCGGGCCCAAACTCTGCTGAAATGT...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACTTCTCCATGCTTTCTTaGAAACTGTTCTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHFSMLS*KLFSAS
Trigger: TGATGCTGAGAACAGTTTCAAAGAAAGCATGGAGAA...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACCCAATTATTTGGTGGTaGCTATTCCAAATAGGGACA +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHPIIWW*LFQIGT
Trigger: TGTCCCTATTTGGAATAGCAACCACCAAATAATTGG...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACCCAATTATTTGGTGGTaGCTATTCCAAATAGGGACA +
Preference number: 5 (lower is better)
Translates to: CWTENGPSGCSHFAAAADPIIWW*LFQIGT
Trigger: TGTCCCTATTTGGAATAGCAACCACCAAATAATTGG...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAACCAATTATTTGGTGGTaGCTATTCCAAATAGGGACA +
Preference number: 5 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQPIIWW*LFQIGT
Trigger: TGTCCCTATTTGGAATAGCAACCACCAAATAATTGG...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGCCACTCCAATTATTaGGTGGTTGCTATTCCAAAT +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHSHSNY*VVAIPN
Trigger: ATTTGGAATAGCAACCACCAAATAATTGGAGTGGCT...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTAGCCTCAAAAAGTCGTaGATCTGCATCATCAAAAGG +
Preference number: 5 (lower is better)
Translates to: HCWTENGPSGCSHFAAAASLKKS*ICIIKR
Trigger: CCTTTTGATGATGCAGATCAACGACTTTTTGAGGCT...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCGCTTGGAAGGCATTGTaGGTTCCCCTGTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVAWKAL*VPLWSR
Trigger: CCTCGACCACAGGGGAACCAACAATGCCTTCCAAGC...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS TCA 90 bp TGGTGGTTGCTATTCCAAATAGGGACACAAAGAACAGATCTTATGTaGAAACCAGATATCTGGTCTGCCTCTGCATCAAAGCGCGGATCC +
Preference number: 5 (lower is better)
Translates to: WWLLFQIGTQRTDLM*KPDIWSASASKRGS
Trigger: GGATCCGCGCTTTGATGCAGAGGCAGACCAGATATCTGGTTTTCACATAAGATCTGTTCTTTGTGTCCCTATTTGGAATAGCAACCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000492761.1
ENST00000497003.5
CDS GCA 90 bp GTTCTCCTCTCAAAGTACAGCGTGAGGTCTGTTGCCAATATTGACTaGTTCAAAAGCTGCATAAGGTCACTATATTCCTTGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: VLLSKYSVRSVANID*FKSCIRSLYSLEDR
Trigger: CCTGTCCTCCAAGGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACCTCACGCTGTACTTTGAGAGGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
CDS GCA 90 bp AATCTGACAGACAGGAAGCTTTCTGGCTGTTCCATGGCTTCCTATTaGTTACAGGGCCTACACTCAAAGCCCTTCATAATCTATTCCCAA +
Preference number: 5 (lower is better)
Translates to: NLTDRKLSGCSMASY*LQGLHSKPFIIYSQ
Trigger: TTGGGAATAGATTATGAAGGGCTTTGAGTGTAGGCCCTGTAAGCAATAGGAAGCCATGGAACAGCCAGAAAGCTTCCTGTCTGTCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS GCA 90 bp ACCTTCTCCTCAAAGTACAGCGTGAGGTCTGTTGCCAATATTGACTaGTTCAAAAGCTGCATAAGGTCACTATATTCCTTGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: TFSSKYSVRSVANID*FKSCIRSLYSLEDR
Trigger: CCTGTCCTCCAAGGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACCTCACGCTGTACTTTGAGGAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS-3UTR CAA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGTCATTGGAGATATCTTaGACCAATTCCAGAAAGAAC +
Preference number: 5 (lower is better)
Translates to: TSFFVLPVALSAADHASRSLEIS*TNSRKN
Trigger: GTTCTTTCTGGAATTGGTCAAAGATATCTCCAATGA...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCGAGACCAAGGTCTTCTaGCCAGCAGCTGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSETKVF*PAAAPS
Trigger: GGAAGGGGCAGCTGCTGGCAAGAAGACCTTGGTCTC...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp GCTGTCCCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTTTCATATTCTTTCCTaGAGGCAGCAAAGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: AVPTHQDCHYIVDCAHNSFHILS*RQQRAE
Trigger: CTCAGCTCTTTGCTGCCTCAAGGAAAGAATATGAAA...GCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGGGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp CCACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAACGATGCATTATTTTCTaGACAATTTTCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PPLSLSFPLLSLLLTMLQRCIIF*TIFSRS
Trigger: TGACCTGGAGAAAATTGTCAAGAAAATAATGCATCG...TTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp ACCTCTTTCTTTGTCCTTCCCGTTGCTCTCTCTGCTGCTGACCATGCTTCAAGGCGATGCATTATTTTCTaGACAATTTTCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TSFFVLPVALSAADHASRRCIIF*TIFSRS
Trigger: TGACCTGGAGAAAATTGTCAAGAAAATAATGCATCG...CCTTGAAGCATGGTCAGCAGCAGAGAGAGCAACGGGAAGGACAAAGAAAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp TGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTGACTACATAATTGTGTTGTaGATGCCAAGTCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: CWTENGPSGCSHFAAAADYIIVL*MPSPQK
Trigger: CTTTTGTGGACTTGGCATCAACAACACAATTATGTA...GTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp CCCAGAGCCTTCATTTCAGCCCATGCGTGTTCATTAGGGAAAAGTGAGGGTCCTTACATAATTGTGTTGTaGATGCCAAGTCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: PRAFISAHACSLGKSEGPYIIVL*MPSPQK
Trigger: CTTTTGTGGACTTGGCATCAACAACACAATTATGTA...AGGACCCTCACTTTTCCCTAATGAACACGCATGGGCTGAAATGAAGGCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACCCAGGACTTCTTCACTaGATCATACATAATTGTGTT +
Preference number: 5 (lower is better)
Translates to: RFYCSVFPQLRVSRPTVHPGLLH*IIHNCV
Trigger: AACACAATTATGTATGATCAAGTGAAGAAGTCCTGG...GTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
CDS-3UTR CAA 90 bp CCTACCCACCAGGATTGCCACTACATTGTAGATTGTGCACATAATAGCTACATAATCAATCCACTCCAGTaGCAACCGAGGCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: PTHQDCHYIVDCAHNSYIINPLQ*QPRQFI
Trigger: GATGAACTGCCTCGGTTGCAACTGGAGTGGATTGAT...TATGTAGCTATTATGTGCACAATCTACAATGTAGTGGCAATCCTGGTGGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGATCAATCCACTCCAGTaGCAACCGAGGCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: ASQCILEMLGLSELKEQKINPLQ*QPRQFI
Trigger: GATGAACTGCCTCGGTTGCAACTGGAGTGGATTGAT...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CAA 90 bp TTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTAAGTAGGCCGACTGTCCACAGGAAAGACAGGCAGTGTTaGGCTTGTAACAAACAGAAA +
Preference number: 5 (lower is better)
Translates to: FYCSVFPQLRVSRPTVHRKDRQC*ACNKQK
Trigger: TTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTT...CCTGTGGACAGTCGGCCTACTTACTCTGAGCTGAGGGAACACTGAACAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp TCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGTTCCCACTGGAAGGAAATaGTTTCACACTATTACTGGA +
Preference number: 5 (lower is better)
Translates to: SLNHLSRSLSFLYWCSYVPTGRK*FHTITG
Trigger: TCCAGTAATAGTGTGAAACAATTTCCTTCCAGTGGG...AACGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS TCA 90 bp GTCGAGAGAAAAGTCATCAAAATGAATGTCATCGATGGCAAGTTCTaGCACCAGAGGGATGTTGGCTGCCTTAAACTTGTCAACTTCAGC +
Preference number: 5 (lower is better)
Translates to: VERKVIKMNVIDGKF*HQRDVGCLKLVNFS
Trigger: GCTGAAGTTGACAAGTTTAAGGCAGCCAACATCCCTCTGGTGTCAGAACTTGCCATCGATGACATTCATTTTGATGACTTTTCTCTCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS TCA 90 bp TCTGACCTTCTCCTCAAAGTACAGCGTGAGGTCTGTTGCCAATATTaGCTGCTTCAAAAGCTGCATAAGGTCACTATATTCCTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: SDLLLKVQREVCCQY*LLQKLHKVTIFLGG
Trigger: TCCTCCAAGGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACCTCACGCTGTACTTTGAGGAGAAGGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS-3UTR CAA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCATTCACGTGGATGGCCTaGGAGCGGGCAAAACTCTTC +
Preference number: 5 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSFTWMA*ERAKLF
Trigger: GAAGAGTTTTGCCCGCTCCAAGGCCATCCACGTGAA...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGTACATAATTGTGTTGTaGATGCCAAGTCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: DIAGLKMALQAVVILQLQYIIVL*MPSPQK
Trigger: CTTTTGTGGACTTGGCATCAACAACACAATTATGTA...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp CATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGCTCCAGGACTTCTTCACTaGATCATACATAATTGTGTT +
Preference number: 5 (lower is better)
Translates to: HCWTENGPSGCSHFAAAAPGLLH*IIHNCV
Trigger: AACACAATTATGTATGATCAAGTGAAGAAGTCCTGG...AGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
CDS-3UTR CAA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGGCTTGGAAGGCATTGTaGGTTCCCCTGTGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLAWKAL*VPLWSR
Trigger: CCTCGACCACAGGGGAACCAACAATGCCTTCCAAGC...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp GTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCTTTGAGATCTCCCACGGTTaGGTCACGGCTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: VNNAKAKDRNLSSSPMFFEISHG*VTAPRS
Trigger: TGACCTTGGAGCCGTGACCAAACCGTGGGAGATCTC...AAAGAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp CAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGATGACGCTGAAGGAGTGAGTTaGAGCTCTAATCTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: QCILEMLGLSELKEQKDDAEGVS*SSNLSR
Trigger: TCGGGAGAGATTAGAGCTCAAACTCACTCCTTCAGC...GTCATCCTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
CDS-3UTR CAA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCACTGTCCACAGGTCCTaGGATCCAAAACAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVTVHRS*DPKQSP
Trigger: AGGGGACTGTTTTGGATCCAAGGACCTGTGGACAGT...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp GACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTTGCAGCTGCAGTTCTGGGAGAAAACTTaGTCTGTAATGAAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: DIAGLKMALQAVVILQLQFWEKT*SVMKVE
Trigger: TTCAACCTTCATTACAGACAAAGTTTTCTCCCAGAA...CTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTACTAGCCCAATGTTCTTaGGATAACACATACCATGTC +
Preference number: 5 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALLAQCS*DNTYHV
Trigger: GACATGGTATGTGTTATCCAAAGAACATTGGGCTAG...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp GGACAGGAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTACAAACAGCTACTAGATaGATGGTTGACATTGTCAGG +
Preference number: 5 (lower is better)
Translates to: GQEAKTGSVWLVTNRKALQTATR*MVDIVR
Trigger: CCTGACAATGTCAACCATCAATCTAGTAGCTGTTTG...TAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTCCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp TCCCTTAACCACCTGTCTCGGTCCCTGTCTTTCCTTTACTGGTGTTCTTACGTTAGTGTCAGCATGACATaGGGCATTGCTAAATCTAAA +
Preference number: 5 (lower is better)
Translates to: SLNHLSRSLSFLYWCSYVSVSMT*GIAKSK
Trigger: TTTAGATTTAGCAATGCCCAATGTCATGCTGACACT...AACGTAAGAACACCAGTAAAGGAAAGACAGGGACCGAGACAGGTGGTTAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACTCAGCATCTCCCATGTaGCTCTGGAACAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHSASPM*LWNSHL
Trigger: CAGGTGGCTGTTCCAGAGCAACATGGGAGATGCTGA...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS-3UTR CAA 90 bp CTTGACAATTTTCTCCAGGTCAGTCTGTTCTTCAAAGAGGTCATTAACCACCTCCACAGTGGACTTTTCTaGACTCATCTTCCAGCACTC +
Preference number: 5 (lower is better)
Translates to: LDNFLQVSLFFKEVINHLHSGLF*THLPAL
Trigger: GAGTGCTGGAAGATGAGTCAAGAAAAGTCCACTGTG...GAGGTGGTTAATGACCTCTTTGAAGAACAGACTGACCTGGAGAAAATTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS TCA 90 bp TTCAGTTCTCCTCTCAAAGTACAGCGTGAGGTCTGTTGCCAATATTaGCTGCTTCAAAAGCTGCATAAGGTCACTATATTCCTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: FSSPLKVQREVCCQY*LLQKLHKVTIFLGG
Trigger: TCCTCCAAGGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACCTCACGCTGTACTTTGAGAGGAGAACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
CDS GCA 90 bp AAGATACATCTGCATAACCTTTCTGGCTGTTCCATGGCTTCCTATTaGTTACAGGGCCTACACTCAAAGCCCTTCATAATCTATTCCCAA +
Preference number: 5 (lower is better)
Translates to: KIHLHNLSGCSMASY*LQGLHSKPFIIYSQ
Trigger: TTGGGAATAGATTATGAAGGGCTTTGAGTGTAGGCCCTGTAAGCAATAGGAAGCCATGGAACAGCCAGAAAGGTTATGCAGATGTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409504.5
CDS CCA 90 bp GGCATAACCCAATTACACAGAAGGGCCCAGGAACTCCTTCTACTTTaGGTGGGCAGGTGTATACAGTTCTTTTCTTCATATAACTTTCTT +
Preference number: 5 (lower is better)
Translates to: GITQLHRRAQELLLL*VGRCIQFFSSYNFL
Trigger: AAGAAAGTTATATGAAGAAAAGAACTGTATACACCTGCCCACCCAAAGTAGAAGGAGTTCCTGGGCCCTTCTGTGTAATTGGGTTATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466790.1
CDS-3UTR CAA 90 bp TTCTCCAGGTCAGTCTGTTCTTCAAAGAGGTCATTAACCACCTCTAGCAAAGCATTTCATATTCTTTCCTaGAGGCAGCAAAGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: FSRSVCSSKRSLTTSSKAFHILS*RQQRAE
Trigger: CTCAGCTCTTTGCTGCCTCAAGGAAAGAATATGAAA...TGCTTTGCTAGAGGTGGTTAATGACCTCTTTGAAGAACAGACTGACCTGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR CAA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCTCACTGGAAGGCCTGTaGAAGCAACCAGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSSLEGL*KQPAQQ
Trigger: TTGCTGAGCTGGTTGCTTCAACAGGCCTTCCAGTGA...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTATTGTGACCCTCACTTaGAAGGATCATCACGGCGTG +
Preference number: 5 (lower is better)
Translates to: KGYHSPSLELPIKHICYSIVTLT*KDHHGV
Trigger: CACGCCGTGATGATCCTTCAAAGTGAGGGTCACAAT...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTGGGAGGATGAGGCAGTaGAGGCCAGCAGTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: YSPTMYSFLGGELGLISIGRMRQ*RPAVVF
Trigger: AAAAACGACTGCTGGCCTCAACTGCCTCATCCTCCC...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp AACGAAGCAGCGCTAATGACGCTTTTACTGTTCAGTGTTCCCTCAGCTCAGAGTTTCTGGGAGAAAACTTaGTCTGTAATGAAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: NEAALMTLLLFSVPSAQSFWEKT*SVMKVE
Trigger: TTCAACCTTCATTACAGACAAAGTTTTCTCCCAGAA...ACTCTGAGCTGAGGGAACACTGAACAGTAAAAGCGTCATTAGCGCTGCTTCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS TCA 90 bp AGTTCAGTTCTCAGGATTGTATTTGCAGTGAGCAAACCTGGGAGATaGAGTAACATCTTTCCACAGACAAACATCAGGCTTGATACCACT +
Preference number: 5 (lower is better)
Translates to: SSVLRIVFAVSKPGR*SNIFPQTNIRLDTT
Trigger: AGTGGTATCAAGCCTGATGTTTGTCTGTGGAAAGATGTTACTTCATCTCCCAGGTTTGCTCACTGCAAATACAATCCTGAGAACTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492761.1
CDS GCA 90 bp AAGTACAGCGTGAGGTCTGTTGCCAATATTGACTGCTTCAAAAGCTaGATAAGGTCACTATATTCCTTGGAGGACAGGTTAGCAAAGATA +
Preference number: 5 (lower is better)
Translates to: KYSVRSVANIDCFKS*IRSLYSLEDRLAKI
Trigger: TATCTTTGCTAACCTGTCCTCCAAGGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACCTCACGCTGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS CCA 90 bp CTCCATGCTTTCTTTGAAACTGTTCTCAGCATCAGCACTGCACTTTaGGGACATCAATTCAAAGGATTTGGTAAATTTCACCACCTGTTG +
Preference number: 5 (lower is better)
Translates to: LHAFFETVLSISTAL*GHQFKGFGKFHHLL
Trigger: CAACAGGTGGTGAAATTTACCAAATCCTTTGAATTGATGTCCCCAAAGTGCAGTGCTGATGCTGAGAACAGTTTCAAAGAAAGCATGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389683.7
ENST00000492761.1
CDS-3UTR CAA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTCATCAGCACTGCACTTaGGGGACATCAATTCAAAGG +
Preference number: 5 (lower is better)
Translates to: KGYHSPSLELPIKHICYSHQHCT*GTSIQR
Trigger: CCTTTGAATTGATGTCCCCAAAGTGCAGTGCTGATG...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp GTAATCTTAAATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATCACTGGAAGGCCTGTaGAAGCAACCAGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: VILNFIPELLTRRTQGSQSLEGL*KQPAQQ
Trigger: TTGCTGAGCTGGTTGCTTCAACAGGCCTTCCAGTGA...TTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATTTAAGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCAAGGCATGTCTCCAGTaGTGGTATAGAACCATCCGA +
Preference number: 5 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVKACLQ*WYRTIR
Trigger: TCGGATGGTTCTATACCACAACTGGAGACATGCCTT...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGGGGGGAGAACTGGGATaGATCAGTATTTATAAGGAT +
Preference number: 5 (lower is better)
Translates to: ASQCILEMLGLSELKEQKGGELG*ISIYKD
Trigger: ATCCTTATAAATACTGATCAATCCCAGTTCTCCCCC...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS CCA 90 bp GGGAACCATAAAAATTATCCTACTAAACTCAAAAGTATCTACAGCTaGACTTCTTCCCTAGCTACATCCCAAGAATGTCTGTGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: GNHKNYPTKLKSIYS*TSSLATSQECLWPD
Trigger: ATCAGGCCACAGACATTCTTGGGATGTAGCTAGGGAAGAAGTCCAGCTGTAGATACTTTTGAGTTTAGTAGGATAATTTTTATGGTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR CAA 90 bp GCTTCCCAGTGCATCCTTGAGATGTTAGGTCTTTCTGAGCTAAAAGAACAAAAGAATCTTATTTATCGCTaGGGCCACACCAATAATCTC +
Preference number: 5 (lower is better)
Translates to: ASQCILEMLGLSELKEQKNLIYR*GHTNNL
Trigger: GAGATTATTGGTGTGGCCCAAGCGATAAATAAGATT...CTTTTGTTCTTTTAGCTCAGAAAGACCTAACATCTCAAGGATGCACTGGGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGATCAATCCACTCCAGTaGCAACCGAGGCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLINPLQ*QPRQFI
Trigger: GATGAACTGCCTCGGTTGCAACTGGAGTGGATTGAT...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCCTCTTTTCTGAGCAATaGATGACAGGGTTCTACACC +
Preference number: 5 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFLFSEQ*MTGFYT
Trigger: GGTGTAGAACCCTGTCATCAATTGCTCAGAAAAGAG...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTTGCTACCAGTGGATGTaGCTATTGGCAACCATGCAG +
Preference number: 5 (lower is better)
Translates to: YSPTMYSFLGGELGLISICYQWM*LLATMQ
Trigger: CTGCATGGTTGCCAATAGCAACATCCACTGGTAGCA...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTAAAGCTAAACACGTCTaGGTCCTTTGGTGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: YSPTMYSFLGGELGLISIKAKHV*VLWCGD
Trigger: GTCCCCACACCAAAGGACCAAGACGTGTTTAGCTTT...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp AATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAATGCTTAGTCTTTCATATTCTTTCCTaGAGGCAGCAAAGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: NFIPELLTRRTQGSQCLVFHILS*RQQRAE
Trigger: CTCAGCTCTTTGCTGCCTCAAGGAAAGAATATGAAA...GACTAAGCATTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCCATCAGCACTGCACTTaGGGGACATCAATTCAAAGG +
Preference number: 5 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSHQHCT*GTSIQR
Trigger: CCTTTGAATTGATGTCCCCAAAGTGCAGTGCTGATG...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp GTAATCTTAAATTTTATACCAGAACTCCTCACTAGGAGAACTCAAGGTAGTCAAAAGGCATGTCTCCAGTaGTGGTATAGAACCATCCGA +
Preference number: 5 (lower is better)
Translates to: VILNFIPELLTRRTQGSQKACLQ*WYRTIR
Trigger: TCGGATGGTTCTATACCACAACTGGAGACATGCCTT...TTGACTACCTTGAGTTCTCCTAGTGAGGAGTTCTGGTATAAAATTTAAGATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp GAAGCAAAGACAGGCAGTGTTTGGCTTGTAACAAACAGAAAAGCCCTATACAAATACAAATTAGGATTCTaGGGACAGTCTGGCACAAAA +
Preference number: 5 (lower is better)
Translates to: EAKTGSVWLVTNRKALYKYKLGF*GQSGTK
Trigger: TTTTGTGCCAGACTGTCCCAAGAATCCTAATTTGTA...TTTGTATAGGGCTTTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp CCTCAAGACAGGAGAAATAGATGGAGGCAATTACAAACAGCTACTAGATTGATGTGGACTGGCATCCATTaGTCTGGGCTATTTATTTAT +
Preference number: 5 (lower is better)
Translates to: PQDRRNRWRQLQTATRLMWTGIH*SGLFIY
Trigger: ATAAATAAATAGCCCAGACAAATGGATGCCAGTCCA...CATCAATCTAGTAGCTGTTTGTAATTGCCTCCATCTATTTCTCCTGTCTTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp TATAGTCCTACTATGTATTCATTTTTAGGGGGAGAACTGGGATTGATCAGTATTACACGTCTTGGTCCTTaGGTGTGGGGACTGAATAAA +
Preference number: 5 (lower is better)
Translates to: YSPTMYSFLGGELGLISITRLGP*VWGLNK
Trigger: TTTATTCAGTCCCCACACCAAAGGACCAAGACGTGT...AATACTGATCAATCCCAGTTCTCCCCCTAAAAATGAATACATAGTAGGACTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS TCA 90 bp CAGCTTTTCCTCACTATCAGGAAGAAACAGGTTCTTGGTCAAACTTaGGACATTTTCACTAATACACATCCCTTACATAACTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: QLFLTIRKKQVLGQT*DIFTNTHPLHNFCF
Trigger: GAAGCAGAAGTTATGTAAGGGATGTGTATTAGTGAAAATGTCTCAAGTTTGACCAAGAACCTGTTTCTTCCTGATAGTGAGGAAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR CAA 90 bp TTGACAATTTTCTCCAGGTCAGTCTGTTCTTCAAAGAGGTCATTAACCACCTCTCGATGCATTATTTTCTaGACAATTTTCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LTIFSRSVCSSKRSLTTSRCIIF*TIFSRS
Trigger: TGACCTGGAGAAAATTGTCAAGAAAATAATGCATCG...AGAGGTGGTTAATGACCTCTTTGAAGAACAGACTGACCTGGAGAAAATTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS-3UTR CAA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCAGCCACTCCAATTATTaGGTGGTTGCTATTCCAAAT +
Preference number: 5 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFSHSNY*VVAIPN
Trigger: ATTTGGAATAGCAACCACCAAATAATTGGAGTGGCT...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCAGCCTCAAAAAGTCGTaGATCTGCATCATCAAAAGG +
Preference number: 5 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSSLKKS*ICIIKR
Trigger: CCTTTTGATGATGCAGATCAACGACTTTTTGAGGCT...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTAAAGACAGGCAGTGTTaGGCTTGTAACAAACAGAAA +
Preference number: 5 (lower is better)
Translates to: KGYHSPSLELPIKHICYSKDRQC*ACNKQK
Trigger: TTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTT...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp CCAGTCAATAATGCCAAAGCTAAGGATAGAAATCTATCTTCTAGCCCAATGTTCAAAGACAGGCAGTGTTaGGCTTGTAACAAACAGAAA +
Preference number: 5 (lower is better)
Translates to: PVNNAKAKDRNLSSSPMFKDRQC*ACNKQK
Trigger: TTTCTGTTTGTTACAAGCCAAACACTGCCTGTCTTT...GAACATTGGGCTAGAAGATAGATTTCTATCCTTAGCTTTGGCATTATTGACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp AAAGGGTACCATAGTCCCAGTCTAGAATTACCCATCAAACACATTTGCTATAGTTACAAATTAGGATTCTaGGGACAGTCTGGCACAAAA +
Preference number: 5 (lower is better)
Translates to: KGYHSPSLELPIKHICYSYKLGF*GQSGTK
Trigger: TTTTGTGCCAGACTGTCCCAAGAATCCTAATTTGTA...ACTATAGCAAATGTGTTTGATGGGTAATTCTAGACTGGGACTATGGTACCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS CCA 90 bp AAATGGAAGATACATCTGCATAACTTTTTCATCATCTTCAGTAAATaGAGCTCCTTCAGGAATCTTATTTATCGCTTGGGCCACACCAAT +
Preference number: 5 (lower is better)
Translates to: KWKIHLHNFFIIFSK*SSFRNLIYRLGHTN
Trigger: ATTGGTGTGGCCCAAGCGATAAATAAGATTCCTGAAGGAGCTCCATTTACTGAAGATGATGAAAAAGTTATGCAGATGTATCTTCCATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCAATCTTATTTATCGCTaGGGCCACACCAATAATCTC +
Preference number: 5 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSNLIYR*GHTNNL
Trigger: GAGATTATTGGTGTGGCCCAAGCGATAAATAAGATT...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS GCA 90 bp CATCATAGTGTATGTATTCTCTGGCAACTTGCTTTTTCCATTCAATaGTTGCGAGAGTTACCCATGTTGTTATATATAATTCTAGGCCAT +
Preference number: 5 (lower is better)
Translates to: HHSVCILWQLAFSIQ*LRELPMLLYIILGH
Trigger: ATGGCCTAGAATTATATATAACAACATGGGTAACTCTCGCAAGCATTGAATGGAAAAAGCAAGTTGCCAGAGAATACATACACTATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS-3UTR CAA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCTTCTCCATGCTTTCTTaGAAACTGTTCTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSFSMLS*KLFSAS
Trigger: TGATGCTGAGAACAGTTTCAAAGAAAGCATGGAGAA...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp CAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTaGTCTGTAATGAAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: QLQISFHPYFNQNLSIHSFWEKT*SVMKVE
Trigger: TTCAACCTTCATTACAGACAAAGTTTTCTCCCAGAA...GGAATGGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000436700.5
CDS-3UTR CAA 90 bp ATAGAAATCTATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACCATAATCTGGTCAGTTaGAGTTTTTACAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: IEIYLLAQCSLDNTYHVHHNLVS*SFYKKA
Trigger: AGCCTTCTTGTAAAAACTCAAACTGACCAGATTATG...GTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATAGATTTCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS-3UTR CAA 90 bp TATCTTCTAGCCCAATGTTCTTTGGATAACACATACCATGTCCACAATTTCTCATTGTCGATTTCATCATaGAATCGTCGATCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: YLLAQCSLDNTYHVHNFSLSISS*NRRSFV
Trigger: AACAAAGGATCGACGATTCAATGATGAAATCGACAA...TGAGAAATTGTGGACATGGTATGTGTTATCCAAAGAACATTGGGCTAGAAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS-3UTR CAA 90 bp CAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGTCTGTAATGAAGGTTTACATAATTGTGTTGTaGATGCCAAGTCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: QNLSIHSFWEKTLSVMKVYIIVL*MPSPQK
Trigger: CTTTTGTGGACTTGGCATCAACAACACAATTATGTA...AACCTTCATTACAGACAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp AAATCCAGCTACAGATTTCCTTCCACCCTTACTTTAATCAAAATCTATCAATCCCCAGGACTTCTTCACTaGATCATACATAATTGTGTT +
Preference number: 5 (lower is better)
Translates to: KSSYRFPSTLTLIKIYQSPGLLH*IIHNCV
Trigger: AACACAATTATGTATGATCAAGTGAAGAAGTCCTGG...GGATTGATAGATTTTGATTAAAGTAAGGGTGGAAGGAAATCTGTAGCTGGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286063.11
ENST00000358450.8
CDS-3UTR CAA 90 bp CACCCTTACTTTAATCAAAATCTATCAATCCATTCCTTCTGGGAGAAAACTTTGAGGCTGTCATTAACATaGATATCTTCCTTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: HPYFNQNLSIHSFWEKTLRLSLT*ISSFPQ
Trigger: TTGAGGAAAGGAAGATATCAATGTTAATGACAGCCT...CAAAGTTTTCTCCCAGAAGGAATGGATTGATAGATTTTGATTAAAGTAAGGGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436700.5
CDS GCA 72 bp CTCAGAGTGGCTGGCGCCGACCCCACCCCGTGGTCCTaGTACTCCTGCTCCGCACAGGTGCCCAGCACTGAG +
Preference number: 6 (lower is better)
Translates to: LRVAGADPTPWS*YSCSAQVPSTE
Trigger: CTCAGTGCTGGGCACCTGTGCGGAGCAGGAGTAGCAGGACCACGGGGTGGGGTCGGCGCCAGCCACTCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 72 bp GCCACCTGGCCAGAGTCCACGCCTCAACTTCGAGGCTaGCGATCCAGAAAGAGCACCTCACGCCCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: ATWPESTPQLRG*RSRKSTSRPGL
Trigger: CAGCCCAGGGCGTGAGGTGCTCTTTCTGGATCGCCAGCCTCGAAGTTGAGGCGTGGACTCTGGCCAGGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS GCA 72 bp TTGGTCCAGTGCCACCACCAACGCTGCTGCCACCTCTaGAGGTGCTGTGAGCCAAGCTGCTGGTACCAGCCA +
Preference number: 6 (lower is better)
Translates to: LVQCHHQRCCHL*RCCEPSCWYQP
Trigger: TGGCTGGTACCAGCAGCTTGGCTCACAGCACCTGCAGAGGTGGCAGCAGCGTTGGTGGTGGCACTGGACCAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CAA 90 bp TGCAGGTGCTGTGAGCCAAGCTGCTGGTACCAGCCAAAGAGGGCCTaGGACCTAAAGCCCCCTGACCCTGACTGTGCCTCTGCAGCCACT +
Preference number: 6 (lower is better)
Translates to: CRCCEPSCWYQPKRA*DLKPPDPDCASAAT
Trigger: AGTGGCTGCAGAGGCACAGTCAGGGTCAGGGGGCTTTAGGTCCAAGGCCCTCTTTGGCTGGTACCAGCAGCTTGGCTCACAGCACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 72 bp CGCTGCTGCCACCTCTGCAGGTGCTGTGAGCCAAGCTaGTGGTACCAGCCAAAGAGGGCCTTGGACCTAAAG +
Preference number: 6 (lower is better)
Translates to: RCCHLCRCCEPS*WYQPKRALDLK
Trigger: CTTTAGGTCCAAGGCCCTCTTTGGCTGGTACCAGCAGCTTGGCTCACAGCACCTGCAGAGGTGGCAGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CAA 72 bp TGTGAGCCAAGCTGCTGGTACCAGCCAAAGAGGGCCTaGGACCTAAAGCCCCCTGACCCTGACTGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: CEPSCWYQPKRA*DLKPPDPDCAS
Trigger: AGAGGCACAGTCAGGGTCAGGGGGCTTTAGGTCCAAGGCCCTCTTTGGCTGGTACCAGCAGCTTGGCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS TCA 72 bp GCCTTGGAGCGGGCAAAACTCTTCCTTAGCTCTTTCTaGGAAGCTCTCCGCTGCAGGTTCCCATCGCCCCTG +
Preference number: 6 (lower is better)
Translates to: ALERAKLFLSSF*EALRCRFPSPL
Trigger: CAGGGGCGATGGGAACCTGCAGCGGAGAGCTTCTCAGAAAGAGCTAAGGAAGAGTTTTGCCCGCTCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 72 bp CCACCTCCCCTGGAGATTATTCCCAGCAGTGGAATCTaGGAGATGCCCCTTCCTTCTCTGGCTCAGAGTGGC +
Preference number: 6 (lower is better)
Translates to: PPPLEIIPSSGI*EMPLPSLAQSG
Trigger: GCCACTCTGAGCCAGAGAAGGAAGGGGCATCTCCCAGATTCCACTGCTGGGAATAATCTCCAGGGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CAA 72 bp AAGCATGCCCCCGGTGTAGAAAACAGGCCCTTTACCTaGGCTCTCCTCCCACTTCCATCAGGGCAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: KHAPGVENRPFT*ALLPLPSGQPR
Trigger: CCTTGGCTGCCCTGATGGAAGTGGGAGGAGAGCCAAGGTAAAGGGCCTGTTTTCTACACCGGGGGCATGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492761.1
CDS CAA 90 bp ATAAACCAGAAGCATGCCCCCGGTGTAGAAAACAGGCCCTTTACCTaGGCTCTCCTCCCACTTCCATCAGGGCAGCCAAGGGCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: INQKHAPGVENRPFT*ALLPLPSGQPRAPV
Trigger: CACTGGAGCCCTTGGCTGCCCTGATGGAAGTGGGAGGAGAGCCAAGGTAAAGGGCCTGTTTTCTACACCGGGGGCATGCTTCTGGTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492761.1
CDS GCA 72 bp GAAAGTTTCCACCTCCCCAAAGTCCAGGCGGGAGGCTaGCATGGTCCCAGACAGCTTTCCTTGCCTGTTTAC +
Preference number: 6 (lower is better)
Translates to: ESFHLPKVQAGG*HGPRQLSLPVY
Trigger: GTAAACAGGCAAGGAAAGCTGTCTGGGACCATGGCAGCCTCCCGCCTGGACTTTGGGGAGGTGGAAACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 72 bp CCCAGGGGACCTGCACCTCATTTGAGTTCTCTGTGCTaGTGCAAGGCAGCAGAGGTGTTCCTGCATGCACAT +
Preference number: 6 (lower is better)
Translates to: PRGPAPHLSSLC*CKAAEVFLHAH
Trigger: ATGTGCATGCAGGAACACCTCTGCTGCCTTGCAGCAGCACAGAGAACTCAAATGAGGTGCAGGTCCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CAA 90 bp CTGCTGCAAGGCAGCAGAGGTGTTCCTGCATGCACATCAAAGAATTaGGAGACCAAGGTCTTCTTGCCAGCAGCTGCCCCTTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: LLQGSRGVPACTSKN*ETKVFLPAAAPSTR
Trigger: CCTGGTGGAAGGGGCAGCTGCTGGCAAGAAGACCTTGGTCTCCAAATTCTTTGATGTGCATGCAGGAACACCTCTGCTGCCTTGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 72 bp AGGCGGGAGGCTGCCATGGTCCCAGACAGCTTTCCTTaGCTGTTTACACGTGAACCAAATGTTTTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: RREAAMVPDSFP*LFTREPNVFLP
Trigger: GGGCAGGAAAACATTTGGTTCACGTGTAAACAGGCAAGGAAAGCTGTCTGGGACCATGGCAGCCTCCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CAA 72 bp ATGGTGATGCTCCAAGGTAGCAGAGGTTCCATAGAGTaGGGCCAGGGCAGAGCCACTCTTAGCTTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: MVMLQGSRGSIE*GQGRATLSLEG
Trigger: GCCTTCCAAGCTAAGAGTGGCTCTGCCCTGGCCCAACTCTATGGAACCTCTGCTACCTTGGAGCATCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS TCA 72 bp CCTCTGCATCAAAGCGCGGATCCTGGTAGGCATCACTaGTGTTCACTGGAAGGCCTGTTGAAGCAACCAGCT +
Preference number: 6 (lower is better)
Translates to: PLHQSADPGRHH*CSLEGLLKQPA
Trigger: AGCTGGTTGCTTCAACAGGCCTTCCAGTGAACATCAGTGATGCCTACCAGGATCCGCGCTTTGATGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000492761.1
ENST00000497003.5
CDS GCA 72 bp AGGGGACCTGCACCTCATTTGAGTTCTCTGTGCTGCTaGAAGGCAGCAGAGGTGTTCCTGCATGCACATCAA +
Preference number: 6 (lower is better)
Translates to: RGPAPHLSSLCC*KAAEVFLHAHQ
Trigger: TTGATGTGCATGCAGGAACACCTCTGCTGCCTTGCAGCAGCACAGAGAACTCAAATGAGGTGCAGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 72 bp CCAGTCCTGTTGAGGCCCTGTGCACCTCCCAACTGTTaGTTCTGTCTTCTTCCCACTCACCATACAATGACC +
Preference number: 6 (lower is better)
Translates to: PVLLRPCAPPNC*FCLLPTHHTMT
Trigger: GGTCATTGTATGGTGAGTGGGAAGAAGACAGAAGCAACAGTTGGGAGGTGCACAGGGCCTCAACAGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CAA 72 bp ACAAGTTCTGCCACCTGTCTGGAGATCTCCCACGGTTaGGTCACGGCTCCAAGGTCACAGGCTGTCATTAAC +
Preference number: 6 (lower is better)
Translates to: TSSATCLEISHG*VTAPRSQAVIN
Trigger: GTTAATGACAGCCTGTGACCTTGGAGCCGTGACCAAACCGTGGGAGATCTCCAGACAGGTGGCAGAACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000436700.5
ENST00000466790.1
ENST00000488399.5
CDS TCA 72 bp CATGGTCCCAGACAGCTTTCCTTGCCTGTTTACACGTaGACCAAATGTTTTCCTGCCCCGAGGCCTCTAGCT +
Preference number: 6 (lower is better)
Translates to: HGPRQLSLPVYT*TKCFPAPRPLA
Trigger: AGCTAGAGGCCTCGGGGCAGGAAAACATTTGGTTCACGTGTAAACAGGCAAGGAAAGCTGTCTGGGACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 72 bp AAGGGGGTGCTCCAAAGAAGAGCTGCAGATTGCTTGTaGCAGGTTGGTGGTTCACAGCTCCAGGTGATGTAT +
Preference number: 6 (lower is better)
Translates to: KGVLQRRAADCL*QVGGSQLQVMY
Trigger: ATACATCACCTGGAGCTGTGAACCACCAACCTGGCACAAGCAATCTGCAGCTCTTCTTTGGAGCACCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS GCA 72 bp ATCAATAAGGGGGTGCTCCAAAGAAGAGCTGCAGATTaGTTGTGCCAGGTTGGTGGTTCACAGCTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: INKGVLQRRAAD*LCQVGGSQLQV
Trigger: CACCTGGAGCTGTGAACCACCAACCTGGCACAAGCAATCTGCAGCTCTTCTTTGGAGCACCCCCTTATTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CCA 72 bp CCTGTTCATCGTAGGTCCTGTTCACGTGGATGGCCTTaGAGCGGGCAAAACTCTTCCTTAGCTCTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: PVHRRSCSRGWP*SGQNSSLALSE
Trigger: CTCAGAAAGAGCTAAGGAAGAGTTTTGCCCGCTCCAAGGCCATCCACGTGAACAGGACCTACGATGAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 72 bp AGGTCACCTGTTCATCGTAGGTCCTGTTCACGTGGATaGCCTTGGAGCGGGCAAAACTCTTCCTTAGCTCTT +
Preference number: 6 (lower is better)
Translates to: RSPVHRRSCSRG*PWSGQNSSLAL
Trigger: AAGAGCTAAGGAAGAGTTTTGCCCGCTCCAAGGCCATCCACGTGAACAGGACCTACGATGAACAGGTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CAA 90 bp GTGGTTGAAATGGTGATGCTCCAAGGTAGCAGAGGTTCCATAGAGTaGGGCCAGGGCAGAGCCACTCTTAGCTTGGAAGGCATTGTTGGT +
Preference number: 6 (lower is better)
Translates to: VVEMVMLQGSRGSIE*GQGRATLSLEGIVG
Trigger: ACCAACAATGCCTTCCAAGCTAAGAGTGGCTCTGCCCTGGCCCAACTCTATGGAACCTCTGCTACCTTGGAGCATCACCATTTCAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS TCA 72 bp TGGAAGGCATTGTTGGTTCCCCTGTGGTCGAGGTCATaGCACAGGCATCCCACAATCACCGCTAAAATTTCC +
Preference number: 6 (lower is better)
Translates to: WKALLVPLWSRS*HRHPTITAKIS
Trigger: GGAAATTTTAGCGGTGATTGTGGGATGCCTGTGTCATGACCTCGACCACAGGGGAACCAACAATGCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS GCA 72 bp CCAGCAGCCCTCATGCTATGTAACAGCATCACAGGCTaGTGTACCAAGGCAATACCAAGTATCAAGGCAGAC +
Preference number: 6 (lower is better)
Translates to: PAALMLCNSITG*CTKAIPSIKAD
Trigger: GTCTGCCTTGATACTTGGTATTGCCTTGGTACAGCAGCCTGTGATGCTGTTACATAGCATGAGGGCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CCA 72 bp GGGGAGGATGAGGCAGTTGAGGCCAGCAGTCGTTTTTaGTGTAGCTCTTCCCACTTACTTCTGTTTGTAGCT +
Preference number: 6 (lower is better)
Translates to: GEDEAVEASSRF*CSSSHLLLFVA
Trigger: AGCTACAAACAGAAGTAAGTGGGAAGAGCTACACCAAAAACGACTGCTGGCCTCAACTGCCTCATCCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000436700.5
ENST00000478646.5
ENST00000488399.5
CDS CAA 72 bp CGATCAAAAATTGCCTGTCTGGAGATCTCCCACGGTTaGGTCACGGCTCCAAGGTCACAGGCTGTCATTAAC +
Preference number: 6 (lower is better)
Translates to: RSKIACLEISHG*VTAPRSQAVIN
Trigger: GTTAATGACAGCCTGTGACCTTGGAGCCGTGACCAAACCGTGGGAGATCTCCAGACAGGCAATTTTTGATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478646.5
CDS CAA 90 bp GATGACATTGCTGGACTGAAAATGGCCCTTCAGGCTGTAGTCATTTaGCAGCTGCAGCTGACCTGGAGGTTTAGTTCCTGTCTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: DDIAGLKMALQAVVI*QLQLTWRFSSCLPW
Trigger: CCAAGGAAGACAGGAACTAAACCTCCAGGTCAGCTGCAGCTGCAAAATGACTACAGCCTGAAGGGCCATTTTCAGTCCAGCAATGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000436700.5
ENST00000478646.5
CDS GCA 72 bp TTCCTTGCCTGTTTACACGTGAACCAAATGTTTTCCTaGCCCGAGGCCTCTAGCTGTTCCTGCACATGTTCA +
Preference number: 6 (lower is better)
Translates to: FLACLHVNQMFS*PEASSCSCTCS
Trigger: TGAACATGTGCAGGAACAGCTAGAGGCCTCGGGGCAGGAAAACATTTGGTTCACGTGTAAACAGGCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 72 bp TCTGTGCTGCTGCAAGGCAGCAGAGGTGTTCCTGCATaGACATCAAAGAATTTGGAGACCAAGGTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SVLLQGSRGVPA*TSKNLETKVFL
Trigger: CAAGAAGACCTTGGTCTCCAAATTCTTTGATGTGCATGCAGGAACACCTCTGCTGCCTTGCAGCAGCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS GCA 72 bp TACAAAGGCATGCAGATGCTATCAATCCACTCCAGTTaGAACCGAGGCAGTTCATCCTTCCGGTTCCGATCA +
Preference number: 6 (lower is better)
Translates to: YKGMQMLSIHSS*NRGSSSFRFRS
Trigger: TGATCGGAACCGGAAGGATGAACTGCCTCGGTTGCAACTGGAGTGGATTGATAGCATCTGCATGCCTTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000436700.5
ENST00000478646.5
ENST00000488399.5
CDS CCA 72 bp CTTCCCCTTCCGCATCAAGTAATCTTCAAACAACTCTaGGTGCCTGTCCAGGAAAGTTTCCACCTCCCCAAA +
Preference number: 6 (lower is better)
Translates to: LPLPHQVIFKQL*VPVQESFHLPK
Trigger: TTTGGGGAGGTGGAAACTTTCCTGGACAGGCACCCAGAGTTGTTTGAAGATTACTTGATGCGGAAGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286063.11
CDS CCA 72 bp CCTTTGGGCCAGATAGCTTTTCATGTTGTAAGTGTATaGACAGTGGGGCCAGCAGCCCTCATGCTATGTAAC +
Preference number: 6 (lower is better)
Translates to: PLGQIAFHVVSV*TVGPAALMLCN
Trigger: GTTACATAGCATGAGGGCTGCTGGCCCCACTGTCCATACACTTACAACATGAAAAGCTATCTGGCCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CAA 72 bp ATACAAAGGCATGCAGATGCTATCAATCCACTCCAGTaGCAACCGAGGCAGTTCATCCTTCCGGTTCCGATC +
Preference number: 6 (lower is better)
Translates to: IQRHADAINPLQ*QPRQFILPVPI
Trigger: GATCGGAACCGGAAGGATGAACTGCCTCGGTTGCAACTGGAGTGGATTGATAGCATCTGCATGCCTTTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000436700.5
ENST00000478646.5
ENST00000488399.5
CDS CAA 90 bp CAGTGCCTGATACAAAGGCATGCAGATGCTATCAATCCACTCCAGTaGCAACCGAGGCAGTTCATCCTTCCGGTTCCGATCAAAAATTGC +
Preference number: 6 (lower is better)
Translates to: QCLIQRHADAINPLQ*QPRQFILPVPIKNC
Trigger: GCAATTTTTGATCGGAACCGGAAGGATGAACTGCCTCGGTTGCAACTGGAGTGGATTGATAGCATCTGCATGCCTTTGTATCAGGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000436700.5
ENST00000478646.5
ENST00000488399.5
CDS TCA 72 bp CAGTGGTTAACATCGCGAACATCAGCTGACACACGTTaGAGGCATGTCTCCAGTTGTGGTATAGAACCATCC +
Preference number: 6 (lower is better)
Translates to: QWLTSRTSADTR*RHVSSCGIEPS
Trigger: GGATGGTTCTATACCACAACTGGAGACATGCCTTCAACGTGTGTCAGCTGATGTTCGCGATGTTAACCACTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS GCA 72 bp GACAGGAAGCTTTCTGGCTGTTCCATGGCTTCCTATTaGTTACAGGGCCTACACTCAAAGCCCTTCATAATC +
Preference number: 6 (lower is better)
Translates to: DRKLSGCSMASY*LQGLHSKPFII
Trigger: GATTATGAAGGGCTTTGAGTGTAGGCCCTGTAAGCAATAGGAAGCCATGGAACAGCCAGAAAGCTTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS CCA 72 bp CTAGCTACATCCCAAGAATGTCTGTGGCCTGATGAATaGGGAAATCTGACAGACAGGAAGCTTTCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: LATSQECLWPDE*GNLTDRKLSGC
Trigger: ACAGCCAGAAAGCTTCCTGTCTGTCAGATTTCCCCATTCATCAGGCCACAGACATTCTTGGGATGTAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS GCA 72 bp CTGCATAACCTTTCTGGCTGTTCCATGGCTTCCTATTaGTTACAGGGCCTACACTCAAAGCCCTTCATAATC +
Preference number: 6 (lower is better)
Translates to: LHNLSGCSMASY*LQGLHSKPFII
Trigger: GATTATGAAGGGCTTTGAGTGTAGGCCCTGTAAGCAATAGGAAGCCATGGAACAGCCAGAAAGGTTATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409504.5
CDS CCA 72 bp CGTCGAGAGAAAAGTCATCAAAATGAATGTCATCGATaGCAAGTTCTGACACCAGAGGGATGTTGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: RREKSHQNECHR*QVLTPEGCWLP
Trigger: AGGCAGCCAACATCCCTCTGGTGTCAGAACTTGCCATCGATGACATTCATTTTGATGACTTTTCTCTCGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS CCA 72 bp GGAAGATACATCTGCATAACCTTTCTGGCTGTTCCATaGCTTCCTATTGCTTACAGGGCCTACACTCAAAGC +
Preference number: 6 (lower is better)
Translates to: GRYICITFLAVP*LPIAYRAYTQS
Trigger: GCTTTGAGTGTAGGCCCTGTAAGCAATAGGAAGCCATGGAACAGCCAGAAAGGTTATGCAGATGTATCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409504.5
CDS CAA 90 bp AAATCTGACAGACAGGAAGCTTTCTGGCTGTTCCATGGCTTCCTATaGCTTACAGGGCCTACACTCAAAGCCCTTCATAATCTATTCCCA +
Preference number: 6 (lower is better)
Translates to: KSDRQEAFWLFHGFL*LTGPTLKALHNLFP
Trigger: TGGGAATAGATTATGAAGGGCTTTGAGTGTAGGCCCTGTAAGCAATAGGAAGCCATGGAACAGCCAGAAAGCTTCCTGTCTGTCAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS TCA 72 bp AGAGCCACAGACTGCTTGGCCCAGGACTTCTTCACTTaGTCATACATAATTGTGTTGTTGATGCCAAGTCCA +
Preference number: 6 (lower is better)
Translates to: RATDCLAQDFFT*SYIIVLLMPSP
Trigger: TGGACTTGGCATCAACAACACAATTATGTATGATCAAGTGAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000492761.1
ENST00000497003.5
CDS CAA 72 bp AAGAGCCACAGACTGCTTGGCCCAGGACTTCTTCACTaGATCATACATAATTGTGTTGTTGATGCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: KSHRLLGPGLLH*IIHNCVVDAKS
Trigger: GGACTTGGCATCAACAACACAATTATGTATGATCAAGTGAAGAAGTCCTGGGCCAAGCAGTCTGTGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000492761.1
ENST00000497003.5
CDS CAA 72 bp TTCCGGTTCCGATCAAAAATTGCTGAAGGAGTGAGTTaGAGCTCTAATCTCTCCCGATCTCCTTGTTCGAAG +
Preference number: 6 (lower is better)
Translates to: FRFRSKIAEGVS*SSNLSRSPCSK
Trigger: CTTCGAACAAGGAGATCGGGAGAGATTAGAGCTCAAACTCACTCCTTCAGCAATTTTTGATCGGAACCGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000436700.5
ENST00000488399.5
CDS CAA 72 bp CCAATTACACAGAAGGGCCCAGGAACTCCTTCTACTTaGGGTGGGCAGGTGTATACAGTTCTTTTCTTCATA +
Preference number: 6 (lower is better)
Translates to: PITQKGPGTPST*GGQVYTVLFFI
Trigger: TATGAAGAAAAGAACTGTATACACCTGCCCACCCAAAGTAGAAGGAGTTCCTGGGCCCTTCTGTGTAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466790.1
CDS GCA 72 bp GAACAGCGTTCACATTTCAGCAGAGTTTGGGCCCGATaGATTATTTTCTTGACAATTTTCTCCAGGTCAGTC +
Preference number: 6 (lower is better)
Translates to: EQRSHFSRVWAR*IIFLTIFSRSV
Trigger: GACTGACCTGGAGAAAATTGTCAAGAAAATAATGCATCGGGCCCAAACTCTGCTGAAATGTGAACGCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS GCA 72 bp TCACTGGAAGGCCTGTTGAAGCAACCAGCTCAGCAATaGTGTTATTTATTAGCCAGTCGGAGTATGATGATT +
Preference number: 6 (lower is better)
Translates to: SLEGLLKQPAQQ*CYLLASRSMMI
Trigger: AATCATCATACTCCGACTGGCTAATAAATAACAGCATTGCTGAGCTGGTTGCTTCAACAGGCCTTCCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000492761.1
ENST00000497003.5
CDS CCA 72 bp CAATTACACAGAAGGGCCCAGGAACTCCTTCTACTTTaGGTGGGCAGGTGTATACAGTTCTTTTCTTCATAT +
Preference number: 6 (lower is better)
Translates to: QLHRRAQELLLL*VGRCIQFFSSY
Trigger: ATATGAAGAAAAGAACTGTATACACCTGCCCACCCAAAGTAGAAGGAGTTCCTGGGCCCTTCTGTGTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466790.1
CDS TCA 72 bp AAAGTCATCAAAATGAATGTCATCGATGGCAAGTTCTaGCACCAGAGGGATGTTGGCTGCCTTAAACTTGTC +
Preference number: 6 (lower is better)
Translates to: KVIKMNVIDGKF*HQRDVGCLKLV
Trigger: GACAAGTTTAAGGCAGCCAACATCCCTCTGGTGTCAGAACTTGCCATCGATGACATTCATTTTGATGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS TCA 72 bp CCTCTCAAAGTACAGCGTGAGGTCTGTTGCCAATATTaGCTGCTTCAAAAGCTGCATAAGGTCACTATATTC +
Preference number: 6 (lower is better)
Translates to: PLKVQREVCCQY*LLQKLHKVTIF
Trigger: GAATATAGTGACCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACCTCACGCTGTACTTTGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
CDS TCA 72 bp CTCAGGATTGTATTTGCAGTGAGCAAACCTGGGAGATaGAGTAACATCTTTCCACAGACAAACATCAGGCTT +
Preference number: 6 (lower is better)
Translates to: LRIVFAVSKPGR*SNIFPQTNIRL
Trigger: AAGCCTGATGTTTGTCTGTGGAAAGATGTTACTTCATCTCCCAGGTTTGCTCACTGCAAATACAATCCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492761.1
CDS TCA 72 bp CTCCTCAAAGTACAGCGTGAGGTCTGTTGCCAATATTaGCTGCTTCAAAAGCTGCATAAGGTCACTATATTC +
Preference number: 6 (lower is better)
Translates to: LLKVQREVCCQY*LLQKLHKVTIF
Trigger: GAATATAGTGACCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACCTCACGCTGTACTTTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS GCA 72 bp GTGAGGTCTGTTGCCAATATTGACTGCTTCAAAAGCTaGATAAGGTCACTATATTCCTTGGAGGACAGGTTA +
Preference number: 6 (lower is better)
Translates to: VRSVANIDCFKS*IRSLYSLEDRL
Trigger: TAACCTGTCCTCCAAGGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS CCA 72 bp AAAGAGCTGAGCGTTAGATATGGCGATTCCACAAAATaGAAGATACATCTGCATAACCTTTCTGGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: KELSVRYGDSTK*KIHLHNLSGCS
Trigger: GGAACAGCCAGAAAGGTTATGCAGATGTATCTTCCATTTTGTGGAATCGCCATATCTAACGCTCAGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409504.5
CDS CAA 72 bp TCAGCACTGCACTTTGGGGACATCAATTCAAAGGATTaGGTAAATTTCACCACTGGTGATTCGATGTCCTCT +
Preference number: 6 (lower is better)
Translates to: SALHFGDINSKD*VNFTTGDSMSS
Trigger: AGAGGACATCGAATCACCAGTGGTGAAATTTACCAAATCCTTTGAATTGATGTCCCCAAAGTGCAGTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS CAA 90 bp CAGCGTTCACATTTCAGCAGAGTTTGGGCCCGATGCATTATTTTCTaGACAATTTTCTCCAGGTCAGTCTGTTCTTCAAAGAGGTCATTA +
Preference number: 6 (lower is better)
Translates to: QRSHFSRVWARCIIF*TIFSRSVCSSKRSL
Trigger: TAATGACCTCTTTGAAGAACAGACTGACCTGGAGAAAATTGTCAAGAAAATAATGCATCGGGCCCAAACTCTGCTGAAATGTGAACGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS GCA 72 bp TCAAAGTACAGCGTGAGGTCTGTTGCCAATATTGACTaGTTCAAAAGCTGCATAAGGTCACTATATTCCTTG +
Preference number: 6 (lower is better)
Translates to: SKYSVRSVANID*FKSCIRSLYSL
Trigger: CAAGGAATATAGTGACCTTATGCAGCTTTTGAAGCAGTCAATATTGGCAACAGACCTCACGCTGTACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS CCA 72 bp AAAGAGCTGAGCGTTAGATATGGCGATTCCACAAAATaGAAGATACATCTGCATAACCTGCACCATGAGAAA +
Preference number: 6 (lower is better)
Translates to: KELSVRYGDSTK*KIHLHNLHHEK
Trigger: TTTCTCATGGTGCAGGTTATGCAGATGTATCTTCCATTTTGTGGAATCGCCATATCTAACGCTCAGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CAA 72 bp CATTTCAGCAGAGTTTGGGCCCGATGCATTATTTTCTaGACAATTTTCTCCAGGTCAGTCTGTTCTTCAAAG +
Preference number: 6 (lower is better)
Translates to: HFSRVWARCIIF*TIFSRSVCSSK
Trigger: CTTTGAAGAACAGACTGACCTGGAGAAAATTGTCAAGAAAATAATGCATCGGGCCCAAACTCTGCTGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS CAA 72 bp CTTCATAATCTATTCCCAACACACAGTGGACTTTTCTaGACTCATCTTCCAGCACTCTTCTCCCTCTACATT +
Preference number: 6 (lower is better)
Translates to: LHNLFPTHSGLF*THLPALFSLYI
Trigger: AATGTAGAGGGAGAAGAGTGCTGGAAGATGAGTCAAGAAAAGTCCACTGTGTGTTGGGAATAGATTATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS TCA 72 bp ATTTCAGCAGAGTTTGGGCCCGATGCATTATTTTCTTaGCAATTTTCTCCAGGTCAGTCTGTTCTTCAAAGA +
Preference number: 6 (lower is better)
Translates to: ISAEFGPDALFS*QFSPGQSVLQR
Trigger: TCTTTGAAGAACAGACTGACCTGGAGAAAATTGTCAAGAAAATAATGCATCGGGCCCAAACTCTGCTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000409504.5
ENST00000433879.1
ENST00000497003.5
CDS TCA 72 bp TTCATAATCTATTCCCAACACACAGTGGACTTTTCTTaGCTCATCTTCCAGCACTCTTCTCCCTCTACATTT +
Preference number: 6 (lower is better)
Translates to: FIIYSQHTVDFS*LIFQHSSPSTF
Trigger: AAATGTAGAGGGAGAAGAGTGCTGGAAGATGAGTCAAGAAAAGTCCACTGTGTGTTGGGAATAGATTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS CAA 72 bp GCGATTCCACAAAATGGAAGATACATCTGCATAACCTaGTATATCTGCATCAAGATGTTGAGTGAACTGGGA +
Preference number: 6 (lower is better)
Translates to: AIPQNGRYICIT*YICIKMLSELG
Trigger: TCCCAGTTCACTCAACATCTTGATGCAGATATACAAGGTTATGCAGATGTATCTTCCATTTTGTGGAATCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS CAA 72 bp TGGTCACGGCTCCAAGGTCACAGGCTGTCATTAACATaGATCTCTCCTCTATATGCCAAAATTATTTCAATA +
Preference number: 6 (lower is better)
Translates to: WSRLQGHRLSLT*ISPLYAKIISI
Trigger: TATTGAAATAATTTTGGCATATAGAGGAGAGATCAATGTTAATGACAGCCTGTGACCTTGGAGCCGTGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466790.1
CDS CAA 72 bp TTCAAGGTCCCAGGGCAGTTACAGAAAGATTTATTGTaGCCAATAAAAATTACTACCGTGGTATTTGCCAGC +
Preference number: 6 (lower is better)
Translates to: FKVPGQLQKDLL*PIKITTVVFAS
Trigger: GCTGGCAAATACCACGGTAGTAATTTTTATTGGCAACAATAAATCTTTCTGTAACTGCCCTGGGACCTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CAA 72 bp AATACGGTCATCATAGTGTATGTATTCTCTGGCAACTaGCTTTTTCCATTCAATGCTTGCGAGAGTTACCCA +
Preference number: 6 (lower is better)
Translates to: NTVIIVYVFSGN*LFPFNACESYP
Trigger: TGGGTAACTCTCGCAAGCATTGAATGGAAAAAGCAAGTTGCCAGAGAATACATACACTATGATGACCGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CAA 90 bp GCAAAGCAAAGCAGCTTTTCCTCACTATCAGGAAGAAACAGGTTCTaGGTCAAACTTGAGACATTTTCACTAATACACATCCCTTACATA +
Preference number: 6 (lower is better)
Translates to: AKQSSFSSLSGRNRF*VKLETFSLIHIPYI
Trigger: TATGTAAGGGATGTGTATTAGTGAAAATGTCTCAAGTTTGACCAAGAACCTGTTTCTTCCTGATAGTGAGGAAAAGCTGCTTTGCTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS CCA 72 bp TTCTTTGAAACTGTTCTCAGCATCAGCACTGCACTTTaGGGACATCAATTCAAAGGATTTGGTAAATTTCAC +
Preference number: 6 (lower is better)
Translates to: FFETVLSISTAL*GHQFKGFGKFH
Trigger: GTGAAATTTACCAAATCCTTTGAATTGATGTCCCCAAAGTGCAGTGCTGATGCTGAGAACAGTTTCAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000286063.11
ENST00000358450.8
ENST00000389683.7
ENST00000409504.5
ENST00000433879.1
ENST00000492761.1
ENST00000497003.5
CDS CCA 72 bp AAAGAGCTGAGCGTTAGATATGGCGATTCCACAAAATaGAAGATACATCTGCATAACCTTGTATATCTGCAT +
Preference number: 6 (lower is better)
Translates to: KELSVRYGDSTK*KIHLHNLVYLH
Trigger: ATGCAGATATACAAGGTTATGCAGATGTATCTTCCATTTTGTGGAATCGCCATATCTAACGCTCAGCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS CAA 72 bp TTGTTCAAGGTCCCAGGGCAGTTACAGAAAGATTTATaGTTGCCAATAAAAATTACTACCGTGGTATTTGCC +
Preference number: 6 (lower is better)
Translates to: LFKVPGQLQKDL*LPIKITTVVFA
Trigger: GGCAAATACCACGGTAGTAATTTTTATTGGCAACAATAAATCTTTCTGTAACTGCCCTGGGACCTTGAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CAA 90 bp CGGATAGGCATGCACAATAATGATTTTGTCTTGTATCCAGTTAGCTaGTCGATTTCATCATTGAATCGTCGATCCTTTGTTTTTGTTTGC +
Preference number: 6 (lower is better)
Translates to: RIGMHNNDFVLYPVS*SISSLNRRSFVFVC
Trigger: GCAAACAAAAACAAAGGATCGACGATTCAATGATGAAATCGACAAGCTAACTGGATACAAGACAAAATCATTATTGTGCATGCCTATCCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS CAA 90 bp CATAGTGTATGTATTCTCTGGCAACTTGCTTTTTCCATTCAATGCTaGCGAGAGTTACCCATGTTGTTATATATAATTCTAGGCCATTCC +
Preference number: 6 (lower is better)
Translates to: HSVCILWQLAFSIQC*RELPMLLYIILGHS
Trigger: GGAATGGCCTAGAATTATATATAACAACATGGGTAACTCTCGCAAGCATTGAATGGAAAAAGCAAGTTGCCAGAGAATACATACACTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS TCA 72 bp TTGTCTTGTATCCAGTTAGCTTGTCGATTTCATCATTaGATCGTCGATCCTTTGTTTTTGTTTGCCTCTGTA +
Preference number: 6 (lower is better)
Translates to: LSCIQLACRFHH*IVDPLFLFASV
Trigger: TACAGAGGCAAACAAAAACAAAGGATCGACGATTCAATGATGAAATCGACAAGCTAACTGGATACAAGACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS TCA 72 bp CTCACTATCAGGAAGAAACAGGTTCTTGGTCAAACTTaGGACATTTTCACTAATACACATCCCTTACATAAC +
Preference number: 6 (lower is better)
Translates to: LTIRKKQVLGQT*DIFTNTHPLHN
Trigger: GTTATGTAAGGGATGTGTATTAGTGAAAATGTCTCAAGTTTGACCAAGAACCTGTTTCTTCCTGATAGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS CCA 72 bp AAAAATTATCCTACTAAACTCAAAAGTATCTACAGCTaGACTTCTTCCCTAGCTACATCCCAAGAATGTCTG +
Preference number: 6 (lower is better)
Translates to: KNYPTKLKSIYS*TSSLATSQECL
Trigger: CAGACATTCTTGGGATGTAGCTAGGGAAGAAGTCCAGCTGTAGATACTTTTGAGTTTAGTAGGATAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427127.1
CDS CAA 72 bp TTTGTCTTGTATCCAGTTAGCTTGTCGATTTCATCATaGAATCGTCGATCCTTTGTTTTTGTTTGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: FVLYPVSLSISS*NRRSFVFVCLC
Trigger: ACAGAGGCAAACAAAAACAAAGGATCGACGATTCAATGATGAAATCGACAAGCTAACTGGATACAAGACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS CAA 72 bp AGCTATGAACCACCTTGTACATGTTTCCTTGTGAATTaGTGTGAGTTCTCTCTCTCTGTGTATATGAATATG +
Preference number: 6 (lower is better)
Translates to: SYEPPCTCFLVN*CEFSLSVYMNM
Trigger: CATATTCATATACACAGAGAGAGAGAACTCACACAAATTCACAAGGAAACATGTACAAGGTGGTTCATAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CAA 90 bp GTTTATACAAATACGGTCATCATAGTGTATGTATTCTCTGGCAACTaGCTTTTTCCATTCAATGCTTGCGAGAGTTACCCATGTTGTTAT +
Preference number: 6 (lower is better)
Translates to: VYTNTVIIVYVFSGN*LFPFNACESYPCCY
Trigger: ATAACAACATGGGTAACTCTCGCAAGCATTGAATGGAAAAAGCAAGTTGCCAGAGAATACATACACTATGATGACCGTATTTGTATAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS GCA 72 bp TTTATTGTTGCCAATAAAAATTACTACCGTGGTATTTaGCAGCTGATGATTTTTCCATTTCCACCTTTCCAT +
Preference number: 6 (lower is better)
Translates to: FIVANKNYYRGI*QLMIFPFPPFH
Trigger: ATGGAAAGGTGGAAATGGAAAAATCATCAGCTGGCAAATACCACGGTAGTAATTTTTATTGGCAACAATAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS GCA 72 bp GTATGTATTCTCTGGCAACTTGCTTTTTCCATTCAATaGTTGCGAGAGTTACCCATGTTGTTATATATAATT +
Preference number: 6 (lower is better)
Translates to: VCILWQLAFSIQ*LRELPMLLYII
Trigger: AATTATATATAACAACATGGGTAACTCTCGCAAGCATTGAATGGAAAAAGCAAGTTGCCAGAGAATACATAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5
CDS CAA 72 bp ATGCACAATAATGATTTTGTCTTGTATCCAGTTAGCTaGTCGATTTCATCATTGAATCGTCGATCCTTTGTT +
Preference number: 6 (lower is better)
Translates to: MHNNDFVLYPVS*SISSLNRRSFV
Trigger: AACAAAGGATCGACGATTCAATGATGAAATCGACAAGCTAACTGGATACAAGACAAAATCATTATTGTGCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358450.8
CDS CAA 72 bp TGTATTCTCTGGCAACTTGCTTTTTCCATTCAATGCTaGCGAGAGTTACCCATGTTGTTATATATAATTCTA +
Preference number: 6 (lower is better)
Translates to: CILWQLAFSIQC*RELPMLLYIIL
Trigger: TAGAATTATATATAACAACATGGGTAACTCTCGCAAGCATTGAATGGAAAAAGCAAGTTGCCAGAGAATACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497003.5