Pregenerated sensors for PDCL (Homo sapiens)
Ensembl gene IDs: ENSG00000136940Ensembl transcript IDs: ENST00000259467.9, ENST00000394285.3, ENST00000436632.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTCATCTGCAGGCGGACCAGCAAGTGAGCATAAATATGAAAACTaGACACTCGTGATAACAGTTAATATGGGCCGGGCGCGGTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: ESSAGGPASEHKYEN*TLVITVNMGRARWL Trigger: GAGCCACCGCGCCCGGCCCATATTAACTGTTATCACGAGTGTTCAGTTTTCATATTTATGCTCACTTGCTGGTCCGCCTGCAGATGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| 3UTR CCA 90 bp | GGTACTGCTGCAGAAACTCTTCATCATCTTGGTCCTCATTCATTATaGCAAACTCCTTCAGAGTCATCTGCAGGCGGACCAGCAAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: GTAAETLHHLGPHSL*QTPSESSAGGPASE Trigger: CTCACTTGCTGGTCCGCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAGAGTTTCTGCAGCAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| 3UTR GCA 90 bp | TACTTGTCTTCTAACATCACCAGGTCAGTAAGCATCAACCCTTCCTaGTGTTCCAGACTTAGTCATGCTGGAGGAAGACATGAAATCCAG | + |
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Preference number: 1 (lower is better) Translates to: YLSSNITRSVSINPS*CSRLSHAGGRHEIQ Trigger: CTGGATTTCATGTCTTCCTCCAGCATGACTAAGTCTGGAACAGCAGGAAGGGTTGATGCTTACTGACCTGGTGATGTTAGAAGACAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| 3UTR TCA 90 bp | GAAGACAATTTCCAAGACCCTGTCTTTAGGATGCTTTGTAAATATTaGCTGGAAACAATAACAGAGATGTCACACCACAGAATCTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: EDNFQDPVFRMLCKY*LETITEMSHHRILS Trigger: ACTTAAGATTCTGTGGTGTGACATCTCTGTTATTGTTTCCAGTCAATATTTACAAAGCATCCTAAAGACAGGGTCTTGGAAATTGTCTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| 3UTR-3UTR TCA 90 bp | TCCGGTACTGCTGCAGAAACTCTTCATCATCTTGGTCCTCATTCATTATGGCAAGACGAGCGGATCACTTaGGGTCAGGAGTTCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: SGTAAETLHHLGPHSLWQDERIT*GQEFKT Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCCGCTCGTC...TTGCCATAATGAATGAGGACCAAGATGATGAAGAGTTTCTGCAGCAGTACCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| 3UTR-3UTR CCA 90 bp | CATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCAGGCGTAATCCTAGCACTTTaGGAGGCTGAGACGAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: HHLGPHSLWQTPSESSAGVILAL*EAETSG Trigger: TCCGCTCGTCTCAGCCTCCCAAAGTGCTAGGATTAC...GCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| 3UTR TCA 72 bp | GCAGGCGGACCAGCAAGTGAGCATAAATATGAAAACTaGACACTCGTGATAACAGTTAATATGGGCCGGGCG | + |
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Preference number: 3 (lower is better) Translates to: AGGPASEHKYEN*TLVITVNMGRA Trigger: CGCCCGGCCCATATTAACTGTTATCACGAGTGTTCAGTTTTCATATTTATGCTCACTTGCTGGTCCGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| 3UTR GCA 72 bp | TCTAACATCACCAGGTCAGTAAGCATCAACCCTTCCTaGTGTTCCAGACTTAGTCATGCTGGAGGAAGACAT | + |
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Preference number: 3 (lower is better) Translates to: SNITRSVSINPS*CSRLSHAGGRH Trigger: ATGTCTTCCTCCAGCATGACTAAGTCTGGAACAGCAGGAAGGGTTGATGCTTACTGACCTGGTGATGTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| 3UTR CCA 72 bp | GCAGAAACTCTTCATCATCTTGGTCCTCATTCATTATaGCAAACTCCTTCAGAGTCATCTGCAGGCGGACCA | + |
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Preference number: 3 (lower is better) Translates to: AETLHHLGPHSL*QTPSESSAGGP Trigger: TGGTCCGCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAGAGTTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR TCA 90 bp | CTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCAGGCGGACCATGGGCCTGTGTTAACTaGGATGCCTTCGCCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGPHSLWQTPSESSAGGPWACVN*DAFACQ Trigger: CTGGCAGGCGAAGGCATCTCAGTTAACACAGGCCCA...TGGTCCGCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR TCA 90 bp | CTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCAGGCGGACCAAGCGGCGCCAGTCATTaGTCACACCTTTTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LGPHSLWQTPSESSAGGPSGASH*SHLLGL Trigger: CAGGCCCAAAAGGTGTGATCAATGACTGGCGCCGCT...TGGTCCGCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR GCA 90 bp | CATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCAGGCTGCCAGCTCAGCCTCTaGAGGCACAGAACTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HHLGPHSLWQTPSESSAGCQLSL*RHRTAG Trigger: GCCAGCAGTTCTGTGCCTGCAGAGGCTGAGCTGGCA...GCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR GCA 90 bp | GTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCAGGCGGACCAGCAATGCTCTGTCTCCAACTaGTTGAAGCGGCGCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: VLIHYGKLLQSHLQADQQCSVSN*LKRRQS Trigger: TGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCA...TTGCTGGTCCGCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR GCA 90 bp | AAACTCCTTCAGAGTCATCTGCAGGCGGACCAGCAAGTGAGCATAAATATGAAATGGCTGGGGCACATCTaGCTCGGTCCTTGTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: KLLQSHLQADQQVSINMKWLGHI*LGPCPR Trigger: ACGAGGACAAGGACCGAGGCAGATGTGCCCCAGCCA...TTTCATATTTATGCTCACTTGCTGGTCCGCCTGCAGATGACTCTGAAGGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR TCA 90 bp | AAAGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCAAACCTGTGCAGCGGCGCCAGTCATTaGTCACACCTTTTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KDHFPVKVVSAQSSANLCSGASH*SHLLGL Trigger: CAGGCCCAAAAGGTGTGATCAATGACTGGCGCCGCT...GCACAGGTTTGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR GCA 90 bp | CTTCATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCATCCATCTCCCGGCACTaGTCCTCCCTCTGCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LHHLGPHSLWQTPSESSASISRH*SSLCSV Trigger: GACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGA...TGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR GCA 90 bp | TCAGCACAGTCTTCAGCAAACCTGTGCCCTAAAATTCCTCTCAGTTACTTCAATTCCATCTCCCGGCACTaGTCCTCCCTCTGCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SAQSSANLCPKIPLSYFNSISRH*SSLCSV Trigger: GACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGA...ATTGAAGTAACTGAGAGGAATTTTAGGGCACAGGTTTGCTGAAGACTGTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR GCA 90 bp | CATTCATTATGGCAAACTCCTTCAGAGTCATCTGCAGGCGGACCAGCAAGTGAGATCTCTTCCATTCGCTaGTTCCGGTACTGCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HSLWQTPSESSAGGPASEISSIR*FRYCCR Trigger: TCTGCAGCAGTACCGGAAGCAGCGAATGGAAGAGAT...CTCACTTGCTGGTCCGCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR TCA 90 bp | CGGTACTGCTGCAGAAACTCTTCATCATCTTGGTCCTCATTCATTATGGCAAACGACGAGCGGATCACTTaGGGTCAGGAGTTCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: RYCCRNSSSSWSSFIMANDERIT*GQEFKT Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCCGCTCGTC...GTTTGCCATAATGAATGAGGACCAAGATGATGAAGAGTTTCTGCAGCAGTACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR GCA 90 bp | TTAAAAGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCAAACCTGTGCCAGCTCAGCCTCTaGAGGCACAGAACTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LKDHFPVKVVSAQSSANLCQLSL*RHRTAG Trigger: GCCAGCAGTTCTGTGCCTGCAGAGGCTGAGCTGGCA...CAGGTTTGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR TCA 90 bp | TTAAAAGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCAAACCTGTGGGCCTGTGTTAACTaGGATGCCTTCGCCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LKDHFPVKVVSAQSSANLWACVN*DAFACQ Trigger: CTGGCAGGCGAAGGCATCTCAGTTAACACAGGCCCA...CAGGTTTGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR TCA 90 bp | AAACTCCTTCAGAGTCATCTGCAGGCGGACCAGCAAGTGAGCATAAATATGAAAGGACCTGCAAGTCATTaGCAGCTTCTTGATCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KLLQSHLQADQQVSINMKGPASH*QLLDQP Trigger: AGGCTGATCAAGAAGCTGTCAATGACTTGCAGGTCC...TTTCATATTTATGCTCACTTGCTGGTCCGCCTGCAGATGACTCTGAAGGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR TCA 90 bp | AAAGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCAAACCTGTGCGGACCTGCAAGTCATTaGCAGCTTCTTGATCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KDHFPVKVVSAQSSANLCGPASH*QLLDQP Trigger: AGGCTGATCAAGAAGCTGTCAATGACTTGCAGGTCC...GCACAGGTTTGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR GCA 90 bp | CATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCAGGCCATCCAGATGGGACCTaGAAGTCATTGACAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HHLGPHSLWQTPSESSAGHPDGT*KSLTAS Trigger: AGAAGCTGTCAATGACTTGCAGGTCCCATCTGGATG...GCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR CCA 90 bp | CTCCTTCAGAGTCATCTGCAGGCGGACCAGCAAGTGAGCATAAATATGAAAACTTCCTCTTCATCCAGATaGGACCTGCAAGTCATTGAC | + |
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Preference number: 4 (lower is better) Translates to: LLQSHLQADQQVSINMKTSSSSR*DLQVID Trigger: GTCAATGACTTGCAGGTCCCATCTGGATGAAGAGGA...AGTTTTCATATTTATGCTCACTTGCTGGTCCGCCTGCAGATGACTCTGAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR TCA 90 bp | GTGGTTTCAGCACAGTCTTCAGCAAACCTGTGCCCTAAAATTCCTCTCAGTTACAAGATTTCTTCCCACTaGTCTTCTCCTGGAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VVSAQSSANLCPKIPLSYKISSH*SSPGGL Trigger: AAGACCTCCAGGAGAAGATCAGTGGGAAGAAATCTT...GTAACTGAGAGGAATTTTAGGGCACAGGTTTGCTGAAGACTGTGCTGAAACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR GCA 90 bp | CTTCATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCACGCTGCTTCCGGTACTaGTGCAGAAACTCTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LHHLGPHSLWQTPSESSARCFRY*CRNSSS Trigger: TGATGAAGAGTTTCTGCAGCAGTACCGGAAGCAGCG...TGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR CCA 90 bp | ATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCAGGCGGACGGTCCTCATTCATTATaGCAAACTCCTTCAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ILVLIHYGKLLQSHLQADGPHSL*QTPSES Trigger: TGACTCTGAAGGAGTTTGCCATAATGAATGAGGACC...GTCCGCCTGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR CCA 90 bp | AAACTCTTCATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATGTAATCCTAGCACTTTaGGAGGCTGAGACGAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: KLFIILVLIHYGKLLQSHVILAL*EAETSG Trigger: TCCGCTCGTCTCAGCCTCCCAAAGTGCTAGGATTAC...ATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAGAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR GCA 90 bp | CTTCATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCATGTCCTCATCCTCACTaGTGCTATAGTAGTACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LHHLGPHSLWQTPSESSACPHPH*CYSSTA Trigger: TGCAGTACTACTATAGCAGCAGTGAGGATGAGGACA...TGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR GCA 90 bp | CTTCATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCATGCTTCCGGTACTGCTaGAGAAACTCTTCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: LHHLGPHSLWQTPSESSACFRYC*RNSSSS Trigger: AGATGATGAAGAGTTTCTGCAGCAGTACCGGAAGCA...TGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR CCA 90 bp | TTAAAAGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCAAACCTGTCCTCTTCATCCAGATaGGACCTGCAAGTCATTGAC | + |
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Preference number: 4 (lower is better) Translates to: LKDHFPVKVVSAQSSANLSSSSR*DLQVID Trigger: GTCAATGACTTGCAGGTCCCATCTGGATGAAGAGGA...CAGGTTTGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR TCA 90 bp | AAACTCTTCATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATTCATTGACAGCTTCTTaGTCAGCCTTTCCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: KLFIILVLIHYGKLLQSHSLTAS*SAFPSP Trigger: GGGAGATGGAAAGGCTGATCAAGAAGCTGTCAATGA...ATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAGAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR GCA 90 bp | TCAGCACAGTCTTCAGCAAACCTGTGCCCTAAAATTCCTCTCAGTTACTTCAATTCTTCAGCAAACCTGTaGCCTAAAATTCCTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SAQSSANLCPKIPLSYFNSSANL*PKIPLS Trigger: ACTGAGAGGAATTTTAGGGCACAGGTTTGCTGAAGA...ATTGAAGTAACTGAGAGGAATTTTAGGGCACAGGTTTGCTGAAGACTGTGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR CCA 90 bp | CCGGTACTGCTGCAGAAACTCTTCATCATCTTGGTCCTCATTCATTATGGCAAAAACTCTTCATCATCTTaGTCCTCATTCATTATGGCA | + |
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Preference number: 4 (lower is better) Translates to: PVLLQKLFIILVLIHYGKNSSSS*SSFIMA Trigger: TGCCATAATGAATGAGGACCAAGATGATGAAGAGTT...TTTGCCATAATGAATGAGGACCAAGATGATGAAGAGTTTCTGCAGCAGTACCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR GCA 90 bp | AATAAATTAAAAGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCACATCCAGATGGGACCTaGAAGTCATTGACAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NKLKDHFPVKVVSAQSSAHPDGT*KSLTAS Trigger: AGAAGCTGTCAATGACTTGCAGGTCCCATCTGGATG...TGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCTTTTAATTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS CCA 90 bp | GCCTTCGCCTGCCAGCTCAGCCTCTGCAGGCACAGAACTGCTGGCTaGGGCACATCTGCCTCGGTCCTTGTCCTCGTGGTCACTGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: AFACQLSLCRHRTAG*GTSASVLVLVVTVL Trigger: GAGGACAGTGACCACGAGGACAAGGACCGAGGCAGATGTGCCCCAGCCAGCAGTTCTGTGCCTGCAGAGGCTGAGCTGGCAGGCGAAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259467.9 ENST00000394285.3 |
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| CDS CCA 90 bp | CGCTCCGGATCCCTTTGGGCCAGCAGCTCCGGGCGCCGGAAGGAATaGAGCACTTTCTTAAGAGGAAGAGCAGTGGGTCAGCGCCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RSGSLWASSSGRRKE*STFLRGRAVGQRPE Trigger: CTCAGGGCGCTGACCCACTGCTCTTCCTCTTAAGAAAGTGCTCCATTCCTTCCGGCGCCCGGAGCTGCTGGCCCAAAGGGATCCGGAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 90 bp | CCAGCTCAGCCTCTGCAGGCACAGAACTGCTGGCTGGGGCACATCTaGCTCGGTCCTTGTCCTCGTGGTCACTGTCCTCATCCTCACTGC | + |
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Preference number: 5 (lower is better) Translates to: PAQPLQAQNCWLGHI*LGPCPRGHCPHPHC Trigger: GCAGTGAGGATGAGGACAGTGACCACGAGGACAAGGACCGAGGCAGATGTGCCCCAGCCAGCAGTTCTGTGCCTGCAGAGGCTGAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259467.9 ENST00000394285.3 |
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| CDS CCA 90 bp | AGATGCCTTCGCCTGCCAGCTCAGCCTCTGCAGGCACAGAACTGCTaGCTGGGGCACATCTGCCTCGGTCCTTGTCCTCGTGGTCACTGT | + |
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Preference number: 5 (lower is better) Translates to: RCLRLPAQPLQAQNC*LGHICLGPCPRGHC Trigger: ACAGTGACCACGAGGACAAGGACCGAGGCAGATGTGCCCCAGCCAGCAGTTCTGTGCCTGCAGAGGCTGAGCTGGCAGGCGAAGGCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259467.9 ENST00000394285.3 |
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| CDS CCA 90 bp | TCAAGGGTGGTCATGGTGTCTGCCCTAGCTCGCTCCGGATCCCTTTaGGCCAGCAGCTCCGGGCGCCGGAAGGAATGGAGCACTTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: SRVVMVSALARSGSL*ASSSGRRKEWSTFL Trigger: TAAGAAAGTGCTCCATTCCTTCCGGCGCCCGGAGCTGCTGGCCCAAAGGGATCCGGAGCGAGCTAGGGCAGACACCATGACCACCCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 90 bp | CTTTCCATCTCCCGGCACTGCTCCTCCCTCTGCTCTGTCTCCAACTaGTTGAAGCGGCGCCAGTCATTGATCACACCTTTTGGGCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: LSISRHCSSLCSVSN*LKRRQSLITPFGPV Trigger: CACAGGCCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000259467.9 ENST00000394285.3 ENST00000436632.5 |
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| CDS TCA 90 bp | GGCAGGAAGGGCATTCCTGGTGAACTGACTGCTGGCGCCAATAACTaGGCTCTTCACCTTGCAGAACTTGACAGCTGGGTACTCTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: GRKGIPGELTAGANN*ALHLAELDSWVLCG Trigger: GCCGCAGAGTACCCAGCTGTCAAGTTCTGCAAGGTGAAGAGCTCAGTTATTGGCGCCAGCAGTCAGTTCACCAGGAATGCCCTTCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 90 bp | TGCCTCGGTCCTTGTCCTCGTGGTCACTGTCCTCATCCTCACTGCTaGTATAGTAGTACTGCAGTTTCTCCCCCAGCAACTTATCATCAA | + |
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Preference number: 5 (lower is better) Translates to: CLGPCPRGHCPHPHC*YSSTAVSPPATYHQ Trigger: TTGATGATAAGTTGCTGGGGGAGAAACTGCAGTACTACTATAGCAGCAGTGAGGATGAGGACAGTGACCACGAGGACAAGGACCGAGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 90 bp | ATCTGCCTCGGTCCTTGTCCTCGTGGTCACTGTCCTCATCCTCACTaGTGCTATAGTAGTACTGCAGTTTCTCCCCCAGCAACTTATCAT | + |
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Preference number: 5 (lower is better) Translates to: ICLGPCPRGHCPHPH*CYSSTAVSPPATYH Trigger: ATGATAAGTTGCTGGGGGAGAAACTGCAGTACTACTATAGCAGCAGTGAGGATGAGGACAGTGACCACGAGGACAAGGACCGAGGCAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 90 bp | CTCTCCTTCCCACTGATCTTCTCCTGGAGGTCTTTCTGTTTCTGTTaGTCCTCCTCTTCATCCAGATGGGACCTGCAAGTCATTGACAGC | + |
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Preference number: 5 (lower is better) Translates to: LSFPLIFSWRSFCFC*SSSSSRWDLQVIDS Trigger: GCTGTCAATGACTTGCAGGTCCCATCTGGATGAAGAGGAGGAGCAACAGAAACAGAAAGACCTCCAGGAGAAGATCAGTGGGAAGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR CAA 90 bp | AAACTCCTTCAGAGTCATCTGCAGGCGGACCAGCAAGTGAGCATAAATATGAAACATCTGCCTCGGTCCTaGTCCTCGTGGTCACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: KLLQSHLQADQQVSINMKHLPRS*SSWSLS Trigger: GGACAGTGACCACGAGGACAAGGACCGAGGCAGATG...TTTCATATTTATGCTCACTTGCTGGTCCGCCTGCAGATGACTCTGAAGGAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS GCA 90 bp | GTCATCTTCCCACTGATCTTCTCCTGGAGGTCTTTCTGTTTCTGTTaGTCCTCCTCTTCATCCAGATGGGACCTGCAAGTCATTGACAGC | + |
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Preference number: 5 (lower is better) Translates to: VIFPLIFSWRSFCFC*SSSSSRWDLQVIDS Trigger: GCTGTCAATGACTTGCAGGTCCCATCTGGATGAAGAGGAGGAGCAACAGAAACAGAAAGACCTCCAGGAGAAGATCAGTGGGAAGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 90 bp | GATTTCTTCCCACTGATCTTCTCCTGGAGGTCTTTCTGTTTCTGTTaGTCCTCCTCTTCATCCAGATGGGACCTGCAAGTCATTGACAGC | + |
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Preference number: 5 (lower is better) Translates to: DFFPLIFSWRSFCFC*SSSSSRWDLQVIDS Trigger: GCTGTCAATGACTTGCAGGTCCCATCTGGATGAAGAGGAGGAGCAACAGAAACAGAAAGACCTCCAGGAGAAGATCAGTGGGAAGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS TCA 90 bp | ACTAGACTATCAGTTCAATCTATTTCCAGGTCGCTATCCTCACTGTaGCACGTGGCAGAGTTACGCACAGATGTCAGCACCAAGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: TRLSVQSISRSLSSL*HVAELRTDVSTKTS Trigger: GGAAGTCTTGGTGCTGACATCTGTGCGTAACTCTGCCACGTGTCACAGTGAGGATAGCGACCTGGAAATAGATTGAACTGATAGTCTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS-3UTR CAA 90 bp | GCAGAAACTCTTCATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGAAGCGGCGCCAGTCATaGATCACACCTTTTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: AETLHHLGPHSLWQTPSEKRRQS*ITPFGP Trigger: AGGCCCAAAAGGTGTGATCAATGACTGGCGCCGCTT...CTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAGAGTTTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR CAA 90 bp | CTTCATCATCTTGGTCCTCATTCATTATGGCAAACTCCTTCAGAGTCATCTGCATCTGTCTCCAACTGCTaGAAGCGGCGCCAGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: LHHLGPHSLWQTPSESSASVSNC*KRRQSL Trigger: CAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGA...TGCAGATGACTCTGAAGGAGTTTGCCATAATGAATGAGGACCAAGATGATGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS CCA 90 bp | CTCTGCGGCAAGGCAGATCATGCAACCATTCATGGCTTCGGTCCCTaGAATGCCATCCTCATAAATATGAACCATGATGACAATGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LCGKADHATIHGFGP*NAILINMNHDDNAF Trigger: AAAAGCATTGTCATCATGGTTCATATTTATGAGGATGGCATTCCAGGGACCGAAGCCATGAATGGTTGCATGATCTGCCTTGCCGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS CCA 90 bp | TATCAGTTCAATCTATTTCCAGGTCGCTATCCTCACTGTGACACGTaGCAGAGTTACGCACAGATGTCAGCACCAAGACTTCCTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: YQFNLFPGRYPHCDT*QSYAQMSAPRLPFL Trigger: CAGAAAAGGAAGTCTTGGTGCTGACATCTGTGCGTAACTCTGCCACGTGTCACAGTGAGGATAGCGACCTGGAAATAGATTGAACTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS-3UTR CAA 90 bp | TTAAAAGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCAAACCTGAAGCGGCGCCAGTCATaGATCACACCTTTTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LKDHFPVKVVSAQSSANLKRRQS*ITPFGP Trigger: AGGCCCAAAAGGTGTGATCAATGACTGGCGCCGCTT...CAGGTTTGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCTTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR CAA 90 bp | CTCCTTCAGAGTCATCTGCAGGCGGACCAGCAAGTGAGCATAAATATGAAAACTGTCATTGACAGCTTCTaGATCAGCCTTTCCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLQSHLQADQQVSINMKTVIDSF*ISLSIS Trigger: GGAGATGGAAAGGCTGATCAAGAAGCTGTCAATGAC...AGTTTTCATATTTATGCTCACTTGCTGGTCCGCCTGCAGATGACTCTGAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS-3UTR CAA 90 bp | AAAGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCAAACCTGTGCGTCATTGACAGCTTCTaGATCAGCCTTTCCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: KDHFPVKVVSAQSSANLCVIDSF*ISLSIS Trigger: GGAGATGGAAAGGCTGATCAAGAAGCTGTCAATGAC...GCACAGGTTTGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR CAA 90 bp | AGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCAAACCTGTGCCCTCTCTTCTTACAGAATaGCCCAAGATTTCTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: RSFPCKGGFSTVFSKPVPSLLTE*PKISSH Trigger: GTGGGAAGAAATCTTGGGCAATTCTGTAAGAAGAGA...GGGCACAGGTTTGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR CAA 90 bp | AAATTAAAAGATCATTTCCCTGTAAAGGTGGTTTCAGCACAGTCTTCAGCAAACTCTGTCTCCAACTGCTaGAAGCGGCGCCAGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: KLKDHFPVKVVSAQSSANSVSNC*KRRQSL Trigger: CAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGA...GTTTGCTGAAGACTGTGCTGAAACCACCTTTACAGGGAAATGATCTTTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436632.5 |
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| CDS-3UTR CAA 90 bp | AAACTCCTTCAGAGTCATCTGCAGGCGGACCAGCAAGTGAGCATAAATATGAAAAAACTCTTCATCATCTaGGTCCTCATTCATTATGGC | + |
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Preference number: 5 (lower is better) Translates to: KLLQSHLQADQQVSINMKKLFII*VLIHYG Trigger: GCCATAATGAATGAGGACCAAGATGATGAAGAGTTT...TTTCATATTTATGCTCACTTGCTGGTCCGCCTGCAGATGACTCTGAAGGAGTTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000394285.3 |
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| CDS CCA 72 bp | GTCATGGTGTCTGCCCTAGCTCGCTCCGGATCCCTTTaGGCCAGCAGCTCCGGGCGCCGGAAGGAATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VMVSALARSGSL*ASSSGRRKEWS Trigger: GCTCCATTCCTTCCGGCGCCCGGAGCTGCTGGCCCAAAGGGATCCGGAGCGAGCTAGGGCAGACACCATGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS CCA 72 bp | CGCCTGCCAGCTCAGCCTCTGCAGGCACAGAACTGCTaGCTGGGGCACATCTGCCTCGGTCCTTGTCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RLPAQPLQAQNC*LGHICLGPCPR Trigger: ACGAGGACAAGGACCGAGGCAGATGTGCCCCAGCCAGCAGTTCTGTGCCTGCAGAGGCTGAGCTGGCAGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259467.9 ENST00000394285.3 |
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| CDS CCA 72 bp | TGCCAGCTCAGCCTCTGCAGGCACAGAACTGCTGGCTaGGGCACATCTGCCTCGGTCCTTGTCCTCGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: CQLSLCRHRTAG*GTSASVLVLVV Trigger: GACCACGAGGACAAGGACCGAGGCAGATGTGCCCCAGCCAGCAGTTCTGTGCCTGCAGAGGCTGAGCTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259467.9 ENST00000394285.3 |
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| CDS GCA 72 bp | CCTCTGCAGGCACAGAACTGCTGGCTGGGGCACATCTaGCTCGGTCCTTGTCCTCGTGGTCACTGTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PLQAQNCWLGHI*LGPCPRGHCPH Trigger: ATGAGGACAGTGACCACGAGGACAAGGACCGAGGCAGATGTGCCCCAGCCAGCAGTTCTGTGCCTGCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259467.9 ENST00000394285.3 |
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| CDS GCA 72 bp | ATCAGCCTTTCCATCTCCCGGCACTGCTCCTCCCTCTaGTCTGTCTCCAACTGCTTGAAGCGGCGCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: ISLSISRHCSSL*SVSNCLKRRQS Trigger: TGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGAAAGGCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259467.9 ENST00000394285.3 ENST00000436632.5 |
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| CDS CCA 72 bp | TCCCTTTGGGCCAGCAGCTCCGGGCGCCGGAAGGAATaGAGCACTTTCTTAAGAGGAAGAGCAGTGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLWASSSGRRKE*STFLRGRAVGQ Trigger: CTGACCCACTGCTCTTCCTCTTAAGAAAGTGCTCCATTCCTTCCGGCGCCCGGAGCTGCTGGCCCAAAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS CAA 90 bp | TCCATCTCCCGGCACTGCTCCTCCCTCTGCTCTGTCTCCAACTGCTaGAAGCGGCGCCAGTCATTGATCACACCTTTTGGGCCTGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SISRHCSSLCSVSNC*KRRQSLITPFGPVL Trigger: TAACACAGGCCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000259467.9 ENST00000394285.3 ENST00000436632.5 |
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| CDS CAA 72 bp | CTGGCGCCAATAACTGAGCTCTTCACCTTGCAGAACTaGACAGCTGGGTACTCTGCGGCAAGGCAGATCATG | + |
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Preference number: 6 (lower is better) Translates to: LAPITELFTLQN*TAGYSAARQIM Trigger: CATGATCTGCCTTGCCGCAGAGTACCCAGCTGTCAAGTTCTGCAAGGTGAAGAGCTCAGTTATTGGCGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 72 bp | CCTTGTCCTCGTGGTCACTGTCCTCATCCTCACTGCTaGTATAGTAGTACTGCAGTTTCTCCCCCAGCAACT | + |
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Preference number: 6 (lower is better) Translates to: PCPRGHCPHPHC*YSSTAVSPPAT Trigger: AGTTGCTGGGGGAGAAACTGCAGTACTACTATAGCAGCAGTGAGGATGAGGACAGTGACCACGAGGACAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 72 bp | GCTCTTCACCTTGCAGAACTTGACAGCTGGGTACTCTaGGGCAAGGCAGATCATGCAACCATTCATGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ALHLAELDSWVL*GKADHATIHGF Trigger: GAAGCCATGAATGGTTGCATGATCTGCCTTGCCGCAGAGTACCCAGCTGTCAAGTTCTGCAAGGTGAAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 72 bp | TGCTGCCGCATCTCTTCCATTCGCTGCTTCCGGTACTaGTGCAGAAACTCTTCATCATCTTGGTCCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: CCRISSIRCFRY*CRNSSSSWSSF Trigger: GAATGAGGACCAAGATGATGAAGAGTTTCTGCAGCAGTACCGGAAGCAGCGAATGGAAGAGATGCGGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS CAA 72 bp | TGCTCTGTCTCCAACTGCTTGAAGCGGCGCCAGTCATaGATCACACCTTTTGGGCCTGTGTTAACTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: CSVSNCLKRRQS*ITPFGPVLTEM Trigger: CATCTCAGTTAACACAGGCCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000259467.9 ENST00000394285.3 ENST00000436632.5 |
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| CDS TCA 72 bp | TCAGTTCAATCTATTTCCAGGTCGCTATCCTCACTGTaGCACGTGGCAGAGTTACGCACAGATGTCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: SVQSISRSLSSL*HVAELRTDVST Trigger: GGTGCTGACATCTGTGCGTAACTCTGCCACGTGTCACAGTGAGGATAGCGACCTGGAAATAGATTGAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS CCA 72 bp | GGTACTCTGCGGCAAGGCAGATCATGCAACCATTCATaGCTTCGGTCCCTGGAATGCCATCCTCATAAATAT | + |
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Preference number: 6 (lower is better) Translates to: GTLRQGRSCNHS*LRSLECHPHKY Trigger: ATATTTATGAGGATGGCATTCCAGGGACCGAAGCCATGAATGGTTGCATGATCTGCCTTGCCGCAGAGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS GCA 72 bp | TGCCGCATCTCTTCCATTCGCTGCTTCCGGTACTGCTaGAGAAACTCTTCATCATCTTGGTCCTCATTCATT | + |
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Preference number: 6 (lower is better) Translates to: CRISSIRCFRYC*RNSSSSWSSFI Trigger: AATGAATGAGGACCAAGATGATGAAGAGTTTCTGCAGCAGTACCGGAAGCAGCGAATGGAAGAGATGCGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS CCA 72 bp | AATCTATTTCCAGGTCGCTATCCTCACTGTGACACGTaGCAGAGTTACGCACAGATGTCAGCACCAAGACTT | + |
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Preference number: 6 (lower is better) Translates to: NLFPGRYPHCDT*QSYAQMSAPRL Trigger: AAGTCTTGGTGCTGACATCTGTGCGTAACTCTGCCACGTGTCACAGTGAGGATAGCGACCTGGAAATAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS CCA 72 bp | GCTTCAAGGTCCACAGCAAAGAAATCATCCCCCAGCTaGTCAGTAACACGAACAAAATTGCCGATCAATTCA | + |
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Preference number: 6 (lower is better) Translates to: ASRSTAKKSSPS*SVTRTKLPINS Trigger: TGAATTGATCGGCAATTTTGTTCGTGTTACTGACCAGCTGGGGGATGATTTCTTTGCTGTGGACCTTGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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| CDS CCA 72 bp | ACCAAGACTTCCTTTTCTGGGAGTAATCCAAATTCCTaGAGAAAAGCTTCAAGGTCCACAGCAAAGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: TKTSFSGSNPNS*RKASRSTAKKS Trigger: TGATTTCTTTGCTGTGGACCTTGAAGCTTTTCTCCAGGAATTTGGATTACTCCCAGAAAAGGAAGTCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259467.9 |
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