Pregenerated sensors for PDCD7 (Homo sapiens)
Ensembl gene IDs: ENSG00000090470Ensembl transcript IDs: ENST00000204549.9, ENST00000559051.1, ENST00000560313.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | ACAGCAAAAGATGGCACCATCGCTAATATTTACAGCTaGAAAGAGCGCTGGCTGGACCACACTCCTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: TAKDGTIANIYS*KERWLDHTPGA Trigger: TGCTCCAGGAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| 3UTR GCA 72 bp | TTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTTaGAGTTTAGTCTACAGCAAAAGATGGCACCATCGC | + |
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Preference number: 3 (lower is better) Translates to: FRVGECHMEFRS*SLVYSKRWHHR Trigger: GCGATGGTGCCATCTTTTGCTGTAGACTAAACTGCAACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCACACTCCCGGCATGCGTGCGCTaGGGCACCGGACAGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: MAPSLIFTAGKSAGWTTLPACVR*GTGQPA Trigger: GGCAGGCTGTCCGGTGCCCCAGCGCACGCATGCCGG...GAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCAGGCTGGGCCCGGCATaGGTGCGCTGGGGCACCGGA | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTRLGPA*VRWGTG Trigger: TCCGGTGCCCCAGCGCACGCATGCCGGGCCCAGCCT...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCACCGCCTCCAGCCACTaGCGGTCGCGCAGGCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTTASSH*RSRRRW Trigger: CCAACGCCTGCGCGACCGGCAGTGGCTGGAGGCGGT...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACGGAGGGCAGCGGCGGTaGCGGACAGCCGAAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDGGQRR*RTAERS Trigger: GCTCCTTTCGGCTGTCCGCCACCGCCGCTGCCCTCC...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCAAAGGGCCGGGCCGCTaGGGGAGAGGCGGCGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTKGPGR*GRGGGK Trigger: TTTCCCGCCGCCTCTCCCCCAGCGGCCCGGCCCTTT...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCACACTCGCACTTCGCCAAGGCTaGGCCCGGCATGCGTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: MAPSLIFTAGKSAGWTTLALRQG*ARHACA Trigger: AGCGCACGCATGCCGGGCCCAGCCTTGGCGAAGTGC...GAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | ATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCACACTCCAGCGGTCAATCTCCTaGTCGCGTTCCACTGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: MAPSLIFTAGKSAGWTTLQRSIS*SRSTAR Trigger: GCGGGCAGTGGAACGCGAGCAGGAGATTGACCGCTG...GAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTCGGTCGCGCAGGCGTTaGAGGGCCGCATCCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSRSRRR*RAASPS Trigger: GCTCGGGGATGCGGCCCTCCAACGCCTGCGCGACCG...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCACACTCGATCTGGATGAGCGCTaGCAGGGAGTGCTCGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: MAPSLIFTAGKSAGWTTLDLDER*QGVLGL Trigger: CAAGCCGAGCACTCCCTGCCAGCGCTCATCCAGATC...GAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTCTGCTCGCGTTCCACTaGCCGCGCGGCCTCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSLLAFH*PRGLCL Trigger: GAGGCAGAGGCCGCGCGGGCAGTGGAACGCGAGCAG...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCTTGCCCAGATGTCGTTaGTGGGGAGCGGGGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTLPRCR*WGAGEG Trigger: TCCTTCCCCCGCTCCCCAGCAACGACATCTGGGCAA...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCTGGCCGAAGAATGGTaGCAGGGCCATGTTCACGAC | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDLAEEW*QGHVHD Trigger: GTCGTGAACATGGCCCTGCCACCATTCTTCGGCCAG...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCACCCTGGCCGAAGAATaGTGGCAGGGCCATGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTTLAEE*WQGHVH Trigger: GTGAACATGGCCCTGCCACCATTCTTCGGCCAGGGT...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTGGGCCTGGGCGACCCTaGCCGAAGAATGGTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSGPGRP*PKNGGR Trigger: CCTGCCACCATTCTTCGGCCAGGGTCGCCCAGGCCC...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTCGCAGCGGCGCGGTCTaGGAGTACAGCAGGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSRSGAV*EYSRTQ Trigger: CTGGGTCCTGCTGTACTCCCAGACCGCGCCGCTGCG...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACAGCTGGAAAGAGCGCTaGCTGGACCACACTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDSWKER*LDHTPG Trigger: TCCAGGAGTGTGGTCCAGCCAGCGCTCTTTCCAGCT...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR TCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACAAAAGTCTCATCTGCTaGGGCTGGAGGACAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDKSLIC*GWRTDP Trigger: GGGGTCTGTCCTCCAGCCTCAGCAGATGAGACTTTT...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACTTCTCCTCCACCTCCTaGACACACTTCACCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDFSSTS*THFTLQ Trigger: CTGGAGGGTGAAGTGTGTGCAGGAGGTGGAGGAGAA...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCGCTGCTTTGAGTTCCTaGTCCCGCTTCTTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTAALSS*SRFFSS Trigger: GGAGGAGAAGAAGCGGGAGCAGGAACTCAAAGCAGC...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCCAATCATGCCTGATCTaGATGAGCGCTGGCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTQSCLI*MSAGRE Trigger: CTCCCTGCCAGCGCTCATCCAGATCAGGCATGATTG...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTCCCAGATGTCGTTGCTaGGGAGCGGGGGAAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSPRCRC*GAGEGP Trigger: GGGTCCTTCCCCCGCTCCCCAGCAACGACATCTGGG...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR TCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACGATGGCACCAGGTACTaGTCCCAATCATGCCTGATC | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDDGTRY*SQSCLI Trigger: GATCAGGCATGATTGGGATCAGTACCTGGTGCCATC...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR TCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACAAGTTGCCTTTGGGATaGTCGGATGGCACCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDKLPLG*SDGTRY Trigger: GTACCTGGTGCCATCCGATCATCCCAAAGGCAACTT...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCAGCTTAACAGCAGTTaGCCAGATGTCGTTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDQLNSS*PDVVAG Trigger: CCCAGCAACGACATCTGGGCAACTGCTGTTAAGCTG...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCGCTCACTGCAAGCTCTaGCTCCTGGGTTTTACACCA | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTAHCKL*LLGFTP Trigger: TGGTGTAAAACCCAGGAGGCAGAGCTTGCAGTGAGC...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCGGAAGGACCCATCCTTaGGGAACGAAGTTGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTGRTHP*GTKLPL Trigger: CAAAGGCAACTTCGTTCCCCAAGGATGGGTCCTTCC...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCACACTCGCAAGCTCTGCCTCCTaGGTTTTACACCATTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: MAPSLIFTAGKSAGWTTLASSAS*VLHHSP Trigger: AGGAGAATGGTGTAAAACCCAGGAGGCAGAGCTTGC...GAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR TCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACAAAGGCTCCAAGAGGTaGGCAAGTGGGAACTCATCT | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDKGSKR*ASGNSS Trigger: AGATGAGTTCCCACTTGCTCACCTCTTGGAGCCTTT...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCTTGGGGAACGAAGTTaGCTTTGGGATGATCGGATG | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDLGERS*LWDDRM Trigger: CATCCGATCATCCCAAAGGCAACTTCGTTCCCCAAG...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCTTTGGGATGATCGGATaGCACCAGGTACTGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTFGMIG*HQVLIP Trigger: TGGGATCAGTACCTGGTGCCATCCGATCATCCCAAA...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCACACTCGCTAATATTTACAGCTaGAAAGAGCGCTGGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: MAPSLIFTAGKSAGWTTLANIYS*KERWLD Trigger: GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGC...GAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTTACGCCATCAGCGGCTaGTTTGAGTTCCTGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSYAISG*FEFLLP Trigger: CGGGAGCAGGAACTCAAAGCAGCCGCTGATGGCGTA...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTGGAAAGAGCGCTGGCTaGACCACACTCCTGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSGKSAG*TTLLEH Trigger: ATGCTCCAGGAGTGTGGTCCAGCCAGCGCTCTTTCC...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR TCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACTTAGTAGAAGGGCTGTaGAATCTACCCATCACACAC | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDLVEGL*NLPITH Trigger: GTGTGTGATGGGTAGATTTCACAGCCCTTCTACTAA...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACAAGTGGGAACTCATCTaGATCCCCAAACAACTTGGA | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDKWELI*IPKQLG Trigger: TCCAAGTTGTTTGGGGATCCAGATGAGTTCCCACTT...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR TCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACAAAACCACATTAATCTaGTTCAAGAGGCACCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDKTTLI*FKRHLW Trigger: CCAGAGGTGCCTCTTGAATCAGATTAATGTGGTTTT...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR TCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCCCTGTATTCAGTGTTTaGGTGTACTTACCCATCAAC | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTPVFSV*VYLPIN Trigger: GTTGATGGGTAAGTACACTCAAACACTGAATACAGG...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR GCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTTTTACACCATTCTCCTaGCTCAGCCTCCCCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSFTPFS*LSLPSS Trigger: GCTACTGGGGAGGCTGAGGCAGGAGAATGGTGTAAA...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCACACTCGATCCCCAAACAACTTaGACTCAATTTCACGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: MAPSLIFTAGKSAGWTTLDPQTT*TQFHVS Trigger: AGAAACGTGAAATTGAGTCCAAGTTGTTTGGGGATC...GAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTCAAGAGGTGAGCAAGTaGGAACTCATCTGGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSQEVSK*ELIWIP Trigger: GGGGATCCAGATGAGTTCCCACTTGCTCACCTCTTG...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR TCA 90 bp | CAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCTCTAAGTTCTCCATCTaGATAATAAGACTAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QKMAPSLIFTAGKSAGWTSKFSI*IIRLGH Trigger: GTGGCCTAGTCTTATTATTCAGATGGAGAACTTAGA...GGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR TCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACGACATGTTATATGAGTaGTCATCTCCAAGCACAACA | + |
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Preference number: 4 (lower is better) Translates to: AKDGTIANIYSWKERWLDDMLYE*SSPSTT Trigger: TGTTGTGCTTGGAGATGATCACTCATATAACATGTC...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTGAACGAAGTTGCCTTTaGGATGATCGGATGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSERSCL*DDRMAP Trigger: TGGTGCCATCCGATCATCCCAAAGGCAACTTCGTTC...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTATTAACAAGTCACTCTaGACCAAGCCCCTCAAAACA | + |
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Preference number: 4 (lower is better) Translates to: TEGKHNFRVGECHMEFRSINKSL*TKPLKT Trigger: TGTTTTGAGGGGCTTGGTCCAGAGTGACTTGTTAAT...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 90 bp | GCCCGGAGCAATCGCGCGCGCACTTCGCCAAGGCTGGGCCCGGCATaGGTGCGCTGGGGCACCGGACAGCCTGCCCGCCGCGGGGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: ARSNRARTSPRLGPA*VRWGTGQPARRGVP Trigger: CGGGACCCCGCGGCGGGCAGGCTGTCCGGTGCCCCAGCGCACGCATGCCGGGCCCAGCCTTGGCGAAGTGCGCGCGCGATTGCTCCGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 90 bp | GCCAAGGCTGGGCCCGGCATGCGTGCGCTGGGGCACCGGACAGCCTaGCCGCCGCGGGGTCCCGAACACCGCCTCCAGCCACTGCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: AKAGPGMRALGHRTA*PPRGPEHRLQPLPV Trigger: GACCGGCAGTGGCTGGAGGCGGTGTTCGGGACCCCGCGGCGGGCAGGCTGTCCGGTGCCCCAGCGCACGCATGCCGGGCCCAGCCTTGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CCA 90 bp | AATCGCGCGCGCACTTCGCCAAGGCTGGGCCCGGCATGCGTGCGCTaGGGCACCGGACAGCCTGCCCGCCGCGGGGTCCCGAACACCGCC | + |
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Preference number: 5 (lower is better) Translates to: NRARTSPRLGPACVR*GTGQPARRGVPNTA Trigger: GGCGGTGTTCGGGACCCCGCGGCGGGCAGGCTGTCCGGTGCCCCAGCGCACGCATGCCGGGCCCAGCCTTGGCGAAGTGCGCGCGCGATT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CCA 90 bp | CCAGGCGCAGAGCCCGGAGCAATCGCGCGCGCACTTCGCCAAGGCTaGGCCCGGCATGCGTGCGCTGGGGCACCGGACAGCCTGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: PGAEPGAIARALRQG*ARHACAGAPDSLPA Trigger: GGCGGGCAGGCTGTCCGGTGCCCCAGCGCACGCATGCCGGGCCCAGCCTTGGCGAAGTGCGCGCGCGATTGCTCCGGGCTCTGCGCCTGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 90 bp | GGAGCAATCGCGCGCGCACTTCGCCAAGGCTGGGCCCGGCATGCGTaGGCTGGGGCACCGGACAGCCTGCCCGCCGCGGGGTCCCGAACA | + |
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Preference number: 5 (lower is better) Translates to: GAIARALRQGWARHA*AGAPDSLPAAGSRT Trigger: TGTTCGGGACCCCGCGGCGGGCAGGCTGTCCGGTGCCCCAGCGCACGCATGCCGGGCCCAGCCTTGGCGAAGTGCGCGCGCGATTGCTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 90 bp | CCAGCGGTCAATCTCCTGCTCGCGTTCCACTGCCCGCGCGGCCTCTaGCTCCCGCTCGGCCTCGCGTTCCCGGGCCCTCTCGCGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: PAVNLLLAFHCPRGL*LPLGLAFPGPLAKP Trigger: CGGCTTCGCGAGAGGGCCCGGGAACGCGAGGCCGAGCGGGAGGCAGAGGCCGCGCGGGCAGTGGAACGCGAGCAGGAGATTGACCGCTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 90 bp | CACACACTTCACCCTCCAGCGGTCAATCTCCTGCTCGCGTTCCACTaGCCGCGCGGCCTCTGCCTCCCGCTCGGCCTCGCGTTCCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: HTLHPPAVNLLLAFH*PRGLCLPLGLAFPG Trigger: GCCCGGGAACGCGAGGCCGAGCGGGAGGCAGAGGCCGCGCGGGCAGTGGAACGCGAGCAGGAGATTGACCGCTGGAGGGTGAAGTGTGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CAA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCCGGTCGCGCAGGCGTaGGAGGGCCGCATCCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: AKDGTIANIYSWKERWLDPVAQA*EGRIPE Trigger: CTCGGGGATGCGGCCCTCCAACGCCTGCGCGACCGG...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 90 bp | GACCACACTCCTGGAGCATCTTTACTAATGCAGCTTAACAGCAGTTaGCCAGATGTCGTTGCTGGGGAGCGGGGGAAGGACCCATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: DHTPGASLLMQLNSS*PDVVAGERGKDPSL Trigger: CAAGGATGGGTCCTTCCCCCGCTCCCCAGCAACGACATCTGGGCAACTGCTGTTAAGCTGCATTAGTAAAGATGCTCCAGGAGTGTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CCA 90 bp | AAGGACCCATCCTTGGGGAACGAAGTTGCCTTTGGGATGATCGGATaGCACCAGGTACTGATCCCAATCATGCCTGATCTGGATGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: KDPSLGNEVAFGMIG*HQVLIPIMPDLDER Trigger: GCGCTCATCCAGATCAGGCATGATTGGGATCAGTACCTGGTGCCATCCGATCATCCCAAAGGCAACTTCGTTCCCCAAGGATGGGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000204549.9 ENST00000560313.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTGTTGCCCAGATGTCGTaGCTGGGGAGCGGGGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: TEGKHNFRVGECHMEFRSVAQMS*LGSGGR Trigger: CCTTCCCCCGCTCCCCAGCAACGACATCTGGGCAAC...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CAA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTGGCTGGACCAGGGAGTGCTCGGCTaGGAGATAATACTGTCGGAA | + |
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Preference number: 5 (lower is better) Translates to: AKDGTIANIYSWKERWLDQGVLG*EIILSE Trigger: TTCCGACAGTATTATCTCCAAGCCGAGCACTCCCTG...GTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTCCATCAGCGGCTGCTTaGAGTTCCTGCTCCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TEGKHNFRVGECHMEFRSPSAAA*SSCSRF Trigger: GAAGCGGGAGCAGGAACTCAAAGCAGCCGCTGATGG...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CCA 90 bp | GCAAAAGATGGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTaGCTGGACCACACTCCTGGAGCATCTTTACTAATGCAGCTTAAC | + |
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Preference number: 5 (lower is better) Translates to: AKDGTIANIYSWKER*LDHTPGASLLMQLN Trigger: GTTAAGCTGCATTAGTAAAGATGCTCCAGGAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCCATCTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTGGGAAGGACCCATCCTaGGGGAACGAAGTTGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TEGKHNFRVGECHMEFRSGKDPS*GNEVAF Trigger: AAAGGCAACTTCGTTCCCCAAGGATGGGTCCTTCCC...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS-3UTR CAA 90 bp | ACAGAAGGAAAGCATAACTTCAGGGTAGGGGAATGCCACATGGAATTTAGAAGTGGATCCCCAAACAACTaGGACTCAATTTCACGTTTC | + |
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Preference number: 5 (lower is better) Translates to: TEGKHNFRVGECHMEFRSGSPNN*DSISRF Trigger: GAAACGTGAAATTGAGTCCAAGTTGTTTGGGGATCC...ACTTCTAAATTCCATGTGGCATTCCCCTACCCTGAAGTTATGCTTTCCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 90 bp | GGGACATCAACTTCTCAAGGACTAATGAGGACTAAACAAGATGTATaGAGCATCCTTGAAACATGGAAACATTATAAACCCATAGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: GTSTSQGLMRTKQDV*SILETWKHYKPIVF Trigger: AAAAACTATGGGTTTATAATGTTTCCATGTTTCAAGGATGCTGCATACATCTTGTTTAGTCCTCATTAGTCCTTGAGAAGTTGATGTCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559051.1 |
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| CDS CAA 90 bp | CGGGGTCCCGAACACCGCCTCCAGCCACTGCCGGTCGCGCAGGCGTaGGAGGGCCGCATCCCCGAGCACGTCGGCCGGCGGCGGCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RGPEHRLQPLPVAQA*EGRIPEHVGRRRRR Trigger: GCGCCGCCGCCGCCGGCCGACGTGCTCGGGGATGCGGCCCTCCAACGCCTGCGCGACCGGCAGTGGCTGGAGGCGGTGTTCGGGACCCCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 72 bp | GCCCGCCGCGGGGTCCCGAACACCGCCTCCAGCCACTaGCGGTCGCGCAGGCGTTGGAGGGCCGCATCCCCG | + |
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Preference number: 6 (lower is better) Translates to: ARRGVPNTASSH*RSRRRWRAASP Trigger: CGGGGATGCGGCCCTCCAACGCCTGCGCGACCGGCAGTGGCTGGAGGCGGTGTTCGGGACCCCGCGGCGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 72 bp | GGGCCCGGCATGCGTGCGCTGGGGCACCGGACAGCCTaGCCGCCGCGGGGTCCCGAACACCGCCTCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GPGMRALGHRTA*PPRGPEHRLQP Trigger: TGGCTGGAGGCGGTGTTCGGGACCCCGCGGCGGGCAGGCTGTCCGGTGCCCCAGCGCACGCATGCCGGGCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CCA 72 bp | CGCACTTCGCCAAGGCTGGGCCCGGCATGCGTGCGCTaGGGCACCGGACAGCCTGCCCGCCGCGGGGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: RTSPRLGPACVR*GTGQPARRGVP Trigger: CGGGACCCCGCGGCGGGCAGGCTGTCCGGTGCCCCAGCGCACGCATGCCGGGCCCAGCCTTGGCGAAGTGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 72 bp | AATCGCGCGCGCACTTCGCCAAGGCTGGGCCCGGCATaGGTGCGCTGGGGCACCGGACAGCCTGCCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: NRARTSPRLGPA*VRWGTGQPARR Trigger: GCGGCGGGCAGGCTGTCCGGTGCCCCAGCGCACGCATGCCGGGCCCAGCCTTGGCGAAGTGCGCGCGCGATT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CCA 72 bp | AACACCGCCTCCAGCCACTGCCGGTCGCGCAGGCGTTaGAGGGCCGCATCCCCGAGCACGTCGGCCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: NTASSHCRSRRR*RAASPSTSAGG Trigger: GCCGCCGGCCGACGTGCTCGGGGATGCGGCCCTCCAACGCCTGCGCGACCGGCAGTGGCTGGAGGCGGTGTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CCA 72 bp | AGCCGCTCGGCCAGTTCCGCGCGCAGCGGCGCGGTCTaGGAGTACAGCAGGACCCAGGCCGCGCCGTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: SRSASSARSGAV*EYSRTQAAPSA Trigger: AGCCGACGGCGCGGCCTGGGTCCTGCTGTACTCCCAGACCGCGCCGCTGCGCGCGGAACTGGCCGAGCGGCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CAA 72 bp | GAACACCGCCTCCAGCCACTGCCGGTCGCGCAGGCGTaGGAGGGCCGCATCCCCGAGCACGTCGGCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: EHRLQPLPVAQA*EGRIPEHVGRR Trigger: CCGCCGGCCGACGTGCTCGGGGATGCGGCCCTCCAACGCCTGCGCGACCGGCAGTGGCTGGAGGCGGTGTTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CCA 72 bp | GAGCCCGGAGCAATCGCGCGCGCACTTCGCCAAGGCTaGGCCCGGCATGCGTGCGCTGGGGCACCGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: EPGAIARALRQG*ARHACAGAPDS Trigger: GCTGTCCGGTGCCCCAGCGCACGCATGCCGGGCCCAGCCTTGGCGAAGTGCGCGCGCGATTGCTCCGGGCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 72 bp | AATCTCCTGCTCGCGTTCCACTGCCCGCGCGGCCTCTaGCTCCCGCTCGGCCTCGCGTTCCCGGGCCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: NLLLAFHCPRGL*LPLGLAFPGPL Trigger: GAGAGGGCCCGGGAACGCGAGGCCGAGCGGGAGGCAGAGGCCGCGCGGGCAGTGGAACGCGAGCAGGAGATT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 72 bp | CACCCTCCAGCGGTCAATCTCCTGCTCGCGTTCCACTaGCCGCGCGGCCTCTGCCTCCCGCTCGGCCTCGCG | + |
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Preference number: 6 (lower is better) Translates to: HPPAVNLLLAFH*PRGLCLPLGLA Trigger: CGCGAGGCCGAGCGGGAGGCAGAGGCCGCGCGGGCAGTGGAACGCGAGCAGGAGATTGACCGCTGGAGGGTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 72 bp | TCCTGCACACACTTCACCCTCCAGCGGTCAATCTCCTaGTCGCGTTCCACTGCCCGCGCGGCCTCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SCTHFTLQRSIS*SRSTARAASAS Trigger: GGAGGCAGAGGCCGCGCGGGCAGTGGAACGCGAGCAGGAGATTGACCGCTGGAGGGTGAAGTGTGTGCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 72 bp | GGAGCGGGGGAAGGACCCATCCTTGGGGAACGAAGTTaGCTTTGGGATGATCGGATGGCACCAGGTACTGAT | + |
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Preference number: 6 (lower is better) Translates to: GAGEGPILGERS*LWDDRMAPGTD Trigger: ATCAGTACCTGGTGCCATCCGATCATCCCAAAGGCAACTTCGTTCCCCAAGGATGGGTCCTTCCCCCGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS CAA 90 bp | CCAATCATGCCTGATCTGGATGAGCGCTGGCAGGGAGTGCTCGGCTaGGAGATAATACTGTCGGAAAGGCTCCAAGAGGTGAGCAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PIMPDLDERWQGVLG*EIILSERLQEVSKW Trigger: CCACTTGCTCACCTCTTGGAGCCTTTCCGACAGTATTATCTCCAAGCCGAGCACTCCCTGCCAGCGCTCATCCAGATCAGGCATGATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000204549.9 ENST00000560313.2 |
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| CDS CCA 72 bp | GGGGAAGGACCCATCCTTGGGGAACGAAGTTGCCTTTaGGATGATCGGATGGCACCAGGTACTGATCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: GEGPILGERSCL*DDRMAPGTDPN Trigger: ATTGGGATCAGTACCTGGTGCCATCCGATCATCCCAAAGGCAACTTCGTTCCCCAAGGATGGGTCCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000204549.9 ENST00000560313.2 |
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| CDS CCA 72 bp | GTACTGATCCCAATCATGCCTGATCTGGATGAGCGCTaGCAGGGAGTGCTCGGCTTGGAGATAATACTGTCG | + |
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Preference number: 6 (lower is better) Translates to: VLIPIMPDLDER*QGVLGLEIILS Trigger: CGACAGTATTATCTCCAAGCCGAGCACTCCCTGCCAGCGCTCATCCAGATCAGGCATGATTGGGATCAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000204549.9 ENST00000560313.2 |
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| CDS CCA 72 bp | TCCTTGGGGAACGAAGTTGCCTTTGGGATGATCGGATaGCACCAGGTACTGATCCCAATCATGCCTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: SLGNEVAFGMIG*HQVLIPIMPDL Trigger: CAGATCAGGCATGATTGGGATCAGTACCTGGTGCCATCCGATCATCCCAAAGGCAACTTCGTTCCCCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000204549.9 ENST00000560313.2 |
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| CDS CCA 72 bp | TTCAAGTGCTTCCTGCTACCTAAGAGAAAGACAACATaGAGAGCCAGCCCCTCTGACCTGATCTGGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: FKCFLLPKRKTT*RASPSDLIWMS Trigger: GCTCATCCAGATCAGGTCAGAGGGGCTGGCTCTCCATGTTGTCTTTCTCTTAGGTAGCAGGAAGCACTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559051.1 |
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| CDS CCA 72 bp | GGCACCATCGCTAATATTTACAGCTGGAAAGAGCGCTaGCTGGACCACACTCCTGGAGCATCTTTACTAATG | + |
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Preference number: 6 (lower is better) Translates to: GTIANIYSWKER*LDHTPGASLLM Trigger: CATTAGTAAAGATGCTCCAGGAGTGTGGTCCAGCCAGCGCTCTTTCCAGCTGTAAATATTAGCGATGGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000204549.9 |
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| CDS GCA 72 bp | AGTAATAGACCTAAACAATGTAAGCACTTCTTCAAGTaGTTCCTGCTACCTAAGAGAAAGACAACATGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SNRPKQCKHFFK*FLLPKRKTTWR Trigger: TCTCCATGTTGTCTTTCTCTTAGGTAGCAGGAAGCACTTGAAGAAGTGCTTACATTGTTTAGGTCTATTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559051.1 |
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| CDS GCA 72 bp | AATCCTCATTATTTACAGATTCTGTATTTGCATATGTaGCTACTAACACAGGGCAAGTCACAACCTGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: NPHYLQILYLHM*LLTQGKSQPEF Trigger: AAACTCAGGTTGTGACTTGCCCTGTGTTAGTAGGCACATATGCAAATACAGAATCTGTAAATAATGAGGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559051.1 |
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