RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDCD6IP-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000271643

Ensembl transcript IDs: ENST00000604982.2

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CTTGTCACATGTTTCGTTTCTAGTCCTGAAACATGGTTAAGTGCTTaGCTCCTAGGGCCTCTGCCGCAGGCTTTTGGTTTGGAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LVTCFVSSPETWLSA*LLGPLPQAFGLEAL
Trigger: GAGAGCCTCCAAACCAAAAGCCTGCGGCAGAGGCCCTAGGAGGCAAGCACTTAACCATGTTTCAGGACTAGAAACGAAACATGTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS TCA 90 bp TTTCTCCGCCATCTGCCTCAACAAATGTCATGTCCCTCATCTTTCTaGTGGCTAATCACTCCCTTTGTATCCTCCCTCCTCTGGTTACCC +
Preference number: 5 (lower is better)
Translates to: FLRHLPQQMSCPSSF*WLITPFVSSLLWLP
Trigger: GGGTAACCAGAGGAGGGAGGATACAAAGGGAGTGATTAGCCATCAGAAAGATGAGGGACATGACATTTGTTGAGGCAGATGGCGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CCA 90 bp CTTTCTCCTCTTTTCATATACTTTGCTTCTTCGTTATCTTCCCAATaGGTCAGTCCTGTCAACCAACCTACAAGACACCACCCATCCCCC +
Preference number: 5 (lower is better)
Translates to: LSPLFIYFASSLSSQ*VSPVNQPTRHHPSP
Trigger: GGGGGATGGGTGGTGTCTTGTAGGTTGGTTGACAGGACTGACCCATTGGGAAGATAACGAAGAAGCAAAGTATATGAAAAGAGGAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 90 bp TCTCATGTTGGGATGGCAGAGTTACAAGATCAAAGTGGTCTGGATTaGTCAGACACTGGTTGGAGGACAACTCTAAGCCTGTTCCATATT +
Preference number: 5 (lower is better)
Translates to: SHVGMAELQDQSGLD*SDTGWRTTLSLFHI
Trigger: AATATGGAACAGGCTTAGAGTTGTCCTCCAACCAGTGTCTGAGCAATCCAGACCACTTTGATCTTGTAACTCTGCCATCCCAACATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CCA 90 bp GCAGAGTTACAAGATCAAAGTGGTCTGGATTGCTCAGACACTGGTTaGAGGACAACTCTAAGCCTGTTCCATATTAGACTTTGTGTGAGC +
Preference number: 5 (lower is better)
Translates to: AELQDQSGLDCSDTG*RTTLSLFHIRLCVS
Trigger: GCTCACACAAAGTCTAATATGGAACAGGCTTAGAGTTGTCCTCCAACCAGTGTCTGAGCAATCCAGACCACTTTGATCTTGTAACTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 90 bp TCGTCTCCATGTGGACTTGAAACACACTATTTTGAAACTCAAAGCTaGCTTCAGCAGGGTTCTCTCCATTCGAAGAGGCAACTATTTCCA +
Preference number: 5 (lower is better)
Translates to: SSPCGLETHYFETQS*LQQGSLHSKRQLFP
Trigger: TGGAAATAGTTGCCTCTTCGAATGGAGAGAACCCTGCTGAAGGCAGCTTTGAGTTTCAAAATAGTGTGTTTCAAGTCCACATGGAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS TCA 90 bp CAGTTTGGTTCACTCTTGCTAATGTTAGCTTTCCTGATTTCGTCTTaGTTTCTGAAATGGTCTCATGATTTGCCTCCTTGCCTCCATTCT +
Preference number: 5 (lower is better)
Translates to: QFGSLLLMLAFLISS*FLKWSHDLPPCLHS
Trigger: AGAATGGAGGCAAGGAGGCAAATCATGAGACCATTTCAGAAATCAAGACGAAATCAGGAAAGCTAACATTAGCAAGAGTGAACCAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 90 bp GCCTCTTTTCTCCTTAATAACAAAGACTCCTCCAAAAATCATAAGTaGTTACTTTCAGGCTATCGTCTCCATGTGGACTTGAAACACACT +
Preference number: 5 (lower is better)
Translates to: ASFLLNNKDSSKNHK*LLSGYRLHVDLKHT
Trigger: AGTGTGTTTCAAGTCCACATGGAGACGATAGCCTGAAAGTAAGCACTTATGATTTTTGGAGGAGTCTTTGTTATTAAGGAGAAAAGAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 90 bp ACTTACTACTCTCTGCTACTAAGTCTTGAACAGAGAGCTAATGTATaGCTAAGGGAAAACCGATTAAAGAAACGTTCTTATATAGCTTCA +
Preference number: 5 (lower is better)
Translates to: TYYSLLLSLEQRANV*LRENRLKKRSYIAS
Trigger: TGAAGCTATATAAGAACGTTTCTTTAATCGGTTTTCCCTTAGGCATACATTAGCTCTCTGTTCAAGACTTAGTAGCAGAGAGTAGTAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CCA 90 bp GATATTAGAGAACTGCCAACTGATGGAAATTTAATCAGCAGTATATaGAATTGGAATGGGCTTATACAGGGAGTAATTCTGAATATAAGG +
Preference number: 5 (lower is better)
Translates to: DIRELPTDGNLISSI*NWNGLIQGVILNIR
Trigger: CCTTATATTCAGAATTACTCCCTGTATAAGCCCATTCCAATTCCATATACTGCTGATTAAATTTCCATCAGTTGGCAGTTCTCTAATATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 72 bp GCAAGTGGAAGTAGGAGGGCTGAGGTAGTGACAAGCTaGTGCATGATGCTACAGATTTCCTCTTCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: ASGSRRAEVVTS*CMMLQISSSAV
Trigger: CACTGCAGAAGAGGAAATCTGTAGCATCATGCAGCAGCTTGTCACTACCTCAGCCCTCCTACTTCCACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CCA 72 bp GGTCTTGTCACATGTTTCGTTTCTAGTCCTGAAACATaGTTAAGTGCTTGCCTCCTAGGGCCTCTGCCGCAG +
Preference number: 6 (lower is better)
Translates to: GLVTCFVSSPET*LSACLLGPLPQ
Trigger: CTGCGGCAGAGGCCCTAGGAGGCAAGCACTTAACCATGTTTCAGGACTAGAAACGAAACATGTGACAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 72 bp TGTTTCGTTTCTAGTCCTGAAACATGGTTAAGTGCTTaGCTCCTAGGGCCTCTGCCGCAGGCTTTTGGTTTG +
Preference number: 6 (lower is better)
Translates to: CFVSSPETWLSA*LLGPLPQAFGL
Trigger: CAAACCAAAAGCCTGCGGCAGAGGCCCTAGGAGGCAAGCACTTAACCATGTTTCAGGACTAGAAACGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 72 bp GGGATGGCAGAGTTACAAGATCAAAGTGGTCTGGATTaGTCAGACACTGGTTGGAGGACAACTCTAAGCCTG +
Preference number: 6 (lower is better)
Translates to: GMAELQDQSGLD*SDTGWRTTLSL
Trigger: CAGGCTTAGAGTTGTCCTCCAACCAGTGTCTGAGCAATCCAGACCACTTTGATCTTGTAACTCTGCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS TCA 72 bp CCCTTCCCAGTCCCATTGCAGTTTGGTGGAGCCATGTaGAAGGTTCTAGCTAGTGAAATGCAAGTGGAAGTA +
Preference number: 6 (lower is better)
Translates to: PFPVPLQFGGAM*KVLASEMQVEV
Trigger: TACTTCCACTTGCATTTCACTAGCTAGAACCTTTCACATGGCTCCACCAAACTGCAATGGGACTGGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS TCA 72 bp CATCTGCCTCAACAAATGTCATGTCCCTCATCTTTCTaGTGGCTAATCACTCCCTTTGTATCCTCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: HLPQQMSCPSSF*WLITPFVSSLL
Trigger: GAGGAGGGAGGATACAAAGGGAGTGATTAGCCATCAGAAAGATGAGGGACATGACATTTGTTGAGGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CAA 90 bp ATCTCATGTTGGGATGGCAGAGTTACAAGATCAAAGTGGTCTGGATaGCTCAGACACTGGTTGGAGGACAACTCTAAGCCTGTTCCATAT +
Preference number: 6 (lower is better)
Translates to: ISCWDGRVTRSKWSG*LRHWLEDNSKPVPY
Trigger: ATATGGAACAGGCTTAGAGTTGTCCTCCAACCAGTGTCTGAGCAATCCAGACCACTTTGATCTTGTAACTCTGCCATCCCAACATGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 72 bp TGTGGACTTGAAACACACTATTTTGAAACTCAAAGCTaGCTTCAGCAGGGTTCTCTCCATTCGAAGAGGCAA +
Preference number: 6 (lower is better)
Translates to: CGLETHYFETQS*LQQGSLHSKRQ
Trigger: TTGCCTCTTCGAATGGAGAGAACCCTGCTGAAGGCAGCTTTGAGTTTCAAAATAGTGTGTTTCAAGTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 72 bp TTGTTTCATCAAGTCTATTTGGGTGTTCCTATTCTATaGTTCCTCCCCTCTAGATTCCCGCCTCTACCTCAT +
Preference number: 6 (lower is better)
Translates to: LFHQVYLGVPIL*FLPSRFPPLPH
Trigger: ATGAGGTAGAGGCGGGAATCTAGAGGGGAGGAAGCATAGAATAGGAACACCCAAATAGACTTGATGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CCA 72 bp CAAGATCAAAGTGGTCTGGATTGCTCAGACACTGGTTaGAGGACAACTCTAAGCCTGTTCCATATTAGACTT +
Preference number: 6 (lower is better)
Translates to: QDQSGLDCSDTG*RTTLSLFHIRL
Trigger: AAGTCTAATATGGAACAGGCTTAGAGTTGTCCTCCAACCAGTGTCTGAGCAATCCAGACCACTTTGATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CAA 72 bp AGACTGTTCCGCTCAGCACCAAAAGGACTTTCTTTCTaGCACTGCAGGAACTTCCCTTACATCAAATCCTTA +
Preference number: 6 (lower is better)
Translates to: RLFRSAPKGLSF*HCRNFPYIKSL
Trigger: TAAGGATTTGATGTAAGGGAAGTTCCTGCAGTGCAAGAAAGAAAGTCCTTTTGGTGCTGAGCGGAACAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CCA 72 bp CTTTTCATATACTTTGCTTCTTCGTTATCTTCCCAATaGGTCAGTCCTGTCAACCAACCTACAAGACACCAC +
Preference number: 6 (lower is better)
Translates to: LFIYFASSLSSQ*VSPVNQPTRHH
Trigger: GTGGTGTCTTGTAGGTTGGTTGACAGGACTGACCCATTGGGAAGATAACGAAGAAGCAAAGTATATGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CAA 72 bp GTTGCAGAGAAAGATCATCATGTTGTGGCAGGGAGTTaGGTTTTCATTCCAAGCCATCAGATAGTATCACCT +
Preference number: 6 (lower is better)
Translates to: VAEKDHHVVAGS*VFIPSHQIVSP
Trigger: AGGTGATACTATCTGATGGCTTGGAATGAAAACCAAACTCCCTGCCACAACATGATGATCTTTCTCTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CAA 72 bp AAGTGCTTACTTTCAGGCTATCGTCTCCATGTGGACTaGAAACACACTATTTTGAAACTCAAAGCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: KCLLSGYRLHVD*KHTILKLKAAF
Trigger: GAAGGCAGCTTTGAGTTTCAAAATAGTGTGTTTCAAGTCCACATGGAGACGATAGCCTGAAAGTAAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CAA 90 bp AAAAATCATAAGTGCTTACTTTCAGGCTATCGTCTCCATGTGGACTaGAAACACACTATTTTGAAACTCAAAGCTGCCTTCAGCAGGGTT +
Preference number: 6 (lower is better)
Translates to: KNHKCLLSGYRLHVD*KHTILKLKAAFSRV
Trigger: AACCCTGCTGAAGGCAGCTTTGAGTTTCAAAATAGTGTGTTTCAAGTCCACATGGAGACGATAGCCTGAAAGTAAGCACTTATGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS TCA 72 bp TCACTCTTGCTAATGTTAGCTTTCCTGATTTCGTCTTaGTTTCTGAAATGGTCTCATGATTTGCCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: SLLLMLAFLISS*FLKWSHDLPPC
Trigger: GCAAGGAGGCAAATCATGAGACCATTTCAGAAATCAAGACGAAATCAGGAAAGCTAACATTAGCAAGAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 72 bp CTCCTTAATAACAAAGACTCCTCCAAAAATCATAAGTaGTTACTTTCAGGCTATCGTCTCCATGTGGACTTG +
Preference number: 6 (lower is better)
Translates to: LLNNKDSSKNHK*LLSGYRLHVDL
Trigger: CAAGTCCACATGGAGACGATAGCCTGAAAGTAAGCACTTATGATTTTTGGAGGAGTCTTTGTTATTAAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CCA 72 bp CAAAATATGAAGTTGCAGAGAAAGATCATCATGTTGTaGCAGGGAGTTTGGTTTTCATTCCAAGCCATCAGA +
Preference number: 6 (lower is better)
Translates to: QNMKLQRKIIML*QGVWFSFQAIR
Trigger: TCTGATGGCTTGGAATGAAAACCAAACTCCCTGCCACAACATGATGATCTTTCTCTGCAACTTCATATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS GCA 72 bp TCTCTGCTACTAAGTCTTGAACAGAGAGCTAATGTATaGCTAAGGGAAAACCGATTAAAGAAACGTTCTTAT +
Preference number: 6 (lower is better)
Translates to: SLLLSLEQRANV*LRENRLKKRSY
Trigger: ATAAGAACGTTTCTTTAATCGGTTTTCCCTTAGGCATACATTAGCTCTCTGTTCAAGACTTAGTAGCAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS TCA 72 bp TTTCATAAAGCAGTTGCTTTTATCATGACAAATTGTTaGAGAGATGGGCCAGTTATCCTGCAGAATGTTTCA +
Preference number: 6 (lower is better)
Translates to: FHKAVAFIMTNC*RDGPVILQNVS
Trigger: TGAAACATTCTGCAGGATAACTGGCCCATCTCTTCAACAATTTGTCATGATAAAAGCAACTGCTTTATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CCA 72 bp ATGTTTCACCTTCTGGATCTGTCTAGTTACTTCCTCTaGCATCATTTAGTTTGTTCATCTATCTGTTGTATT +
Preference number: 6 (lower is better)
Translates to: MFHLLDLSSYFL*HHLVCSSICCI
Trigger: AATACAACAGATAGATGAACAAACTAAATGATGCCAGAGGAAGTAACTAGACAGATCCAGAAGGTGAAACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2
CDS CAA 72 bp AAATTCTTCAACTTGGACAACAAGTTTCTGAATGATTaGATGCCTGCTTACTCATCCAACTTTATTCCATCC +
Preference number: 6 (lower is better)
Translates to: KFFNLDNKFLND*MPAYSSNFIPS
Trigger: GGATGGAATAAAGTTGGATGAGTAAGCAGGCATCAAATCATTCAGAAACTTGTTGTCCAAGTTGAAGAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604982.2