Pregenerated sensors for PDCD5 (Homo sapiens)
Ensembl gene IDs: ENSG00000105185Ensembl transcript IDs: ENST00000221784.8, ENST00000419343.7, ENST00000590247.7
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTCCAGTGCAGGGGCAATTGAAGCTAGCTGACCCTAACAGTCATTaGGTCACAGACACCAACAAGGTTCCAGAGCAACGCCAGGAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: LPVQGQLKLADPNSH*VTDTNKVPEQRQER Trigger: CCTTTCCTGGCGTTGCTCTGGAACCTTGTTGGTGTCTGTGACCCAATGACTGTTAGGGTCAGCTAGCTTCAATTGCCCCTGCACTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR GCA 90 bp | CTTCTCAGGGCAGGTGGGGTTCGTCTTGATCTCAAAGGCCAGGTTTaGCACAACATACCCCTCATGGTATTACAGCAACACAGAGAACAT | + |
|
Preference number: 1 (lower is better) Translates to: LLRAGGVRLDLKGQV*HNIPLMVLQQHREH Trigger: ATGTTCTCTGTGTTGCTGTAATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGATCAAGACGAACCCCACCTGCCCTGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR CAA 90 bp | GCTGTGGTGGTAGCAGACGGCTTCTCAGGGCAGGTGGGGTTCGTCTaGATCTCAAAGGCCAGGTTTGCCACAACATACCCCTCATGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: AVVVADGFSGQVGFV*ISKARFATTYPSWY Trigger: ATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGATCAAGACGAACCCCACCTGCCCTGAGAAGCCGTCTGCTACCACCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR-3UTR GCA 90 bp | ATACCACGGTGTTTGGTGTCAGGAATAGACACACCACTTCTGCCCGAGAAGCTTGTTACTGACAAACCTTaGTTCCAGTGCAGGGGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: IPRCLVSGIDTPLLPEKLVTDKP*FQCRGN Trigger: ATTGCCCCTGCACTGGAAGCAAGGTTTGTCAGTAAC...AAGCTTCTCGGGCAGAAGTGGTGTGTCTATTCCTGACACCAAACACCGTGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR-3UTR CCA 90 bp | GTTCGTCTTGATCTCAAAGGCCAGGTTTGCCACAACATACCCCTCATGGTATTAGACCCTAACAGTCATTaGGTCACAGACACCAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: VRLDLKGQVCHNIPLMVLDPNSH*VTDTNK Trigger: CTTGTTGGTGTCTGTGACCCAATGACTGTTAGGGTC...TAATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGATCAAGACGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR-3UTR CCA 90 bp | ACACTCGGAAAAGATCAACCCAACCAGCTCTCTCCCACACAAGCAGTTCTCAGTACAACATACCCCTCATaGTATTACAGCAACACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TLGKDQPNQLSPTQAVLSTTYPS*YYSNTE Trigger: CTCTGTGTTGCTGTAATACCATGAGGGGTATGTTGT...ACTGAGAACTGCTTGTGTGGGAGAGAGCTGGTTGGGTTGATCTTTTCCGAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGAATTTACCTCTGCAGATGGAATCACTTTGTACTCTTTTTGAGGTGTGGGGAAGGTGGGGTTCGTCTTaGTCTCAAAGGCCAGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: KNLPLQMESLCTLFEVWGRWGSS*SQRPGL Trigger: CAAACCTGGCCTTTGAGATCAAGACGAACCCCACCT...TCCCCACACCTCAAAAAGAGTACAAAGTGATTCCATCTGCAGAGGTAAATTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR CCA 72 bp | CAGGGGCAATTGAAGCTAGCTGACCCTAACAGTCATTaGGTCACAGACACCAACAAGGTTCCAGAGCAACGC | + |
|
Preference number: 3 (lower is better) Translates to: QGQLKLADPNSH*VTDTNKVPEQR Trigger: GCGTTGCTCTGGAACCTTGTTGGTGTCTGTGACCCAATGACTGTTAGGGTCAGCTAGCTTCAATTGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAGTCACACTCGGAAAAGATCAACCCAACCAGCTCTCTCCCACACAAGCAGCAGGTGGGGTTCGTCTaGATCTCAAAGGCCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GKSHSEKINPTSSLPHKQQVGFV*ISKARF Trigger: AAACCTGGCCTTTGAGATCAAGACGAACCCCACCTG...CTGCTTGTGTGGGAGAGAGCTGGTTGGGTTGATCTTTTCCGAGTGTGACTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAAAGGCCAGGTTTGCCACAACATACCCCTCATGGTATTACAGCAACACAGCCAGTGCAGGGGCAATaGAAGCTAGCTGACCCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SQRPGLPQHTPHGITATQPVQGQ*KLADPN Trigger: GTTAGGGTCAGCTAGCTTCAATTGCCCCTGCACTGG...CTGTGTTGCTGTAATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR GCA 72 bp | GCAGGTGGGGTTCGTCTTGATCTCAAAGGCCAGGTTTaGCACAACATACCCCTCATGGTATTACAGCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: AGGVRLDLKGQV*HNIPLMVLQQH Trigger: GTGTTGCTGTAATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGATCAAGACGAACCCCACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR CCA 72 bp | ATCTCAAAGGCCAGGTTTGCCACAACATACCCCTCATaGTATTACAGCAACACAGAGAACATAAGCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ISKARFATTYPS*YYSNTENISKA Trigger: TGCCTTGCTTATGTTCTCTGTGTTGCTGTAATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTGAAGGAGGTAAGTCACACTCGGAAAAGATCAACCCAACCAGCTCTCGCTCGGCGTCAGCGCTaGAGCAGCCGCGGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPLKEVSHTRKRSTQPALARRQR*SSRGHS Trigger: AGAGTGACCGCGGCTGCTCCAGCGCTGACGCCGAGC...GAGAGCTGGTTGGGTTGATCTTTTCCGAGTGTGACTTACCTCCTTCAAGGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CCA 90 bp | ATCCCCTTGAAGGAGGTAAGTCACACTCGGAAAAGATCAACCCAACCAGCTCTCGCTCCTCGTCCGCCATaGCTCGGCGTCAGCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPLKEVSHTRKRSTQPALAPRPP*LGVSAG Trigger: TCCAGCGCTGACGCCGAGCCATGGCGGACGAGGAGC...GAGAGCTGGTTGGGTTGATCTTTTCCGAGTGTGACTTACCTCCTTCAAGGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR CAA 72 bp | GTAGCAGACGGCTTCTCAGGGCAGGTGGGGTTCGTCTaGATCTCAAAGGCCAGGTTTGCCACAACATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VADGFSGQVGFV*ISKARFATTYP Trigger: GGGGTATGTTGTGGCAAACCTGGCCTTTGAGATCAAGACGAACCCCACCTGCCCTGAGAAGCCGTCTGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CCA 90 bp | GTTCGTCTTGATCTCAAAGGCCAGGTTTGCCACAACATACCCCTCATGGTATTACAGGATCCCCGTGTTTaGCCTGCAGCTCGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRLDLKGQVCHNIPLMVLQDPRV*PAARPA Trigger: GGCTGGCCGAGCTGCAGGCCAAACACGGGGATCCTG...TAATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGATCAAGACGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR TCA 90 bp | GGTAAGTCACACTCGGAAAAGATCAACCCAACCAGCTCTCTCCCACACAAGCAGCTGCTATTCCTCACTTaGGAAGGAGGGGGAAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSEKINPTSSLPHKQLLFLT*EGGGSI Trigger: GATACTTCCCCCTCCTTCTCAAGTGAGGAATAGCAG...CTGCTTGTGTGGGAGAGAGCTGGTTGGGTTGATCTTTTCCGAGTGTGACTTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR GCA 90 bp | ATACCCCTCATGGTATTACAGCAACACAGAGAACATAAGCAAGGCATCTTAGCATCCCCGTGTTTGGCCTaGAGCTCGGCCAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPLMVLQQHREHKQGILASPCLA*SSASLC Trigger: ACAGAGGCTGGCCGAGCTGCAGGCCAAACACGGGGA...TGCTAAGATGCCTTGCTTATGTTCTCTGTGTTGCTGTAATACCATGAGGGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR TCA 90 bp | GCTGACCCTAACAGTCATTGGGTCACAGACACCAACAAGGTTCCAGAGCAACGCACTTTGTACTCTTTTTaGGGTGTGGGGAAAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADPNSHWVTDTNKVPEQRTLYSF*GVGKEL Trigger: GAGCTCTTTCCCCACACCTCAAAAAGAGTACAAAGT...GCGTTGCTCTGGAACCTTGTTGGTGTCTGTGACCCAATGACTGTTAGGGTCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CCA 90 bp | GGTAAGTCACACTCGGAAAAGATCAACCCAACCAGCTCTCTCCCACACAAGCAGGACCCTAACAGTCATTaGGTCACAGACACCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKSHSEKINPTSSLPHKQDPNSH*VTDTNK Trigger: CTTGTTGGTGTCTGTGACCCAATGACTGTTAGGGTC...CTGCTTGTGTGGGAGAGAGCTGGTTGGGTTGATCTTTTCCGAGTGTGACTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGTGCAGGGGCAATTGAAGCTAGCTGACCCTAACAGTCATTGGGTCACAACTCTTTTTGAGGTGTaGGGAAAGAGCTCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVQGQLKLADPNSHWVTTLFEV*GKSSGR Trigger: CCTTCCTGAGCTCTTTCCCCACACCTCAAAAAGAGT...TGTGACCCAATGACTGTTAGGGTCAGCTAGCTTCAATTGCCCCTGCACTGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR TCA 90 bp | CAGAGCAACGCCAGGAAAGGAGCGAAGCAGAGGAATTTAGGAAAGGCAATTTATAGGTGGGGTTCGTCTTaGTCTCAAAGGCCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSNARKGAKQRNLGKAIYRWGSS*SQRPGL Trigger: CAAACCTGGCCTTTGAGATCAAGACGAACCCCACCT...ATAAATTGCCTTTCCTAAATTCCTCTGCTTCGCTCCTTTCCTGGCGTTGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| 3UTR CAA 72 bp | ACACACCACTTCTGCCCGAGAAGCTTAAACATCCCCTaGAAGGAGGTAAGTCACACTCGGAAAAGATCAACC | + |
|
Preference number: 4 (lower is better) Translates to: THHFCPRSLNIP*KEVSHTRKRST Trigger: GGTTGATCTTTTCCGAGTGTGACTTACCTCCTTCAAGGGGATGTTTAAGCTTCTCGGGCAGAAGTGGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGTGCAGGGGCAATTGAAGCTAGCTGACCCTAACAGTCATTGGGTCACAATCCATCTTTTCATTTaGCACAAGCATCTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPVQGQLKLADPNSHWVTIHLFI*HKHLGT Trigger: TGTCCCCAGATGCTTGTGGCAAATGAAAAGATGGAT...TGTGACCCAATGACTGTTAGGGTCAGCTAGCTTCAATTGCCCCTGCACTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAGGCCAGGTTTGCCACAACATACCCCTCATGGTATTACAGCAACACAGCGTGAACTAAAAGGGTaGGAATGGAGTCAAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRPGLPQHTPHGITATQRELKG*EWSQEP Trigger: AGGCTCTTGACTCCATTCCCACCCTTTTAGTTCACG...CTGTGTTGCTGTAATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR GCA 90 bp | ATACCCCTCATGGTATTACAGCAACACAGAGAACATAAGCAAGGCATCTTAGCAGTTACTGACAAACCTTaGTTCCAGTGCAGGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IPLMVLQQHREHKQGILAVTDKP*FQCRGN Trigger: ATTGCCCCTGCACTGGAAGCAAGGTTTGTCAGTAAC...TGCTAAGATGCCTTGCTTATGTTCTCTGTGTTGCTGTAATACCATGAGGGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR GCA 90 bp | AAGAATTTACCTCTGCAGATGGAATCACTTTGTACTCTTTTTGAGGTGTGGGGACTCAAAGGCCAGGTTTaGCACAACATACCCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KNLPLQMESLCTLFEVWGLKGQV*HNIPLM Trigger: CATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAG...TCCCCACACCTCAAAAAGAGTACAAAGTGATTCCATCTGCAGAGGTAAATTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CCA 90 bp | GTTCGTCTTGATCTCAAAGGCCAGGTTTGCCACAACATACCCCTCATGGTATTACTAAAAGGGTGGGAATaGAGTCAAGAGCCTATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRLDLKGQVCHNIPLMVLLKGWE*SQEPIK Trigger: TTTTATAGGCTCTTGACTCCATTCCCACCCTTTTAG...TAATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGATCAAGACGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CCA 90 bp | TTACAGCAACACAGAGAACATAAGCAAGGCATCTTAGCACCTTCTCATCTGCAAACAACATACCCCTCATaGTATTACAGCAACACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQQHREHKQGILAPSHLQTTYPS*YYSNTE Trigger: CTCTGTGTTGCTGTAATACCATGAGGGGTATGTTGT...TTGCAGATGAGAAGGTGCTAAGATGCCTTGCTTATGTTCTCTGTGTTGCTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR GCA 90 bp | CAGAGCAACGCCAGGAAAGGAGCGAAGCAGAGGAATTTAGGAAAGGCAATTTATCAAAGAATTTACCTCTaGAGATGGAATCACTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QSNARKGAKQRNLGKAIYQRIYL*RWNHFV Trigger: TACAAAGTGATTCCATCTGCAGAGGTAAATTCTTTG...ATAAATTGCCTTTCCTAAATTCCTCTGCTTCGCTCCTTTCCTGGCGTTGCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR TCA 90 bp | AAGAATTTACCTCTGCAGATGGAATCACTTTGTACTCTTTTTGAGGTGTGGGGAATGCAGCTGACCTTTTaGAGCCATGTTTTGATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNLPLQMESLCTLFEVWGMQLTF*SHVLIK Trigger: CTTTATCAAAACATGGCTTCAAAAGGTCAGCTGCAT...TCCCCACACCTCAAAAAGAGTACAAAGTGATTCCATCTGCAGAGGTAAATTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR TCA 90 bp | CGTGAACTAAAAGGGTGGGAATGGAGTCAAGAGCCTATAAAAATTAGAACCCTCAAAATGTCTCTGGGCTaGAAAATATGTGTGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RELKGWEWSQEPIKIRTLKMSLG*KICVVD Trigger: ATCTACCACACATATTTTTCAGCCCAGAGACATTTT...GAGGGTTCTAATTTTTATAGGCTCTTGACTCCATTCCCACCCTTTTAGTTCACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS CCA 90 bp | CTCAGCGCCTCAAGCTCCTCGTCCGCCATGGCTCGGCGTCAGCGCTaGAGCAGCCGCGGTCACTCTCGCAGCCCCTCGGCGCGAGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSASSSSSAMARRQR*SSRGHSRSPSARAR Trigger: CCGCGCTCGCGCCGAGGGGCTGCGAGAGTGACCGCGGCTGCTCCAGCGCTGACGCCGAGCCATGGCGGACGAGGAGCTTGAGGCGCTGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419343.7 ENST00000590247.7 |
||
| CDS-3UTR CAA 90 bp | TCTCAAAGGCCAGGTTTGCCACAACATACCCCTCATGGTATTACAGCAACACAGCCAGGATCCCCGTGTTaGGCCTGCAGCTCGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQRPGLPQHTPHGITATQPGSPC*ACSSAS Trigger: GCTGGCCGAGCTGCAGGCCAAACACGGGGATCCTGG...CTGTGTTGCTGTAATACCATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CAA 90 bp | AGACGGCTTCTCAGGGCAGGTGGGGTTCGTCTTGATCTCAAAGGCCAGGTTTGCCCAGTGCAGGGGCAATaGAAGCTAGCTGACCCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRLLRAGGVRLDLKGQVCPVQGQ*KLADPN Trigger: GTTAGGGTCAGCTAGCTTCAATTGCCCCTGCACTGG...GCAAACCTGGCCTTTGAGATCAAGACGAACCCCACCTGCCCTGAGAAGCCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGGGCAGGTGGGGTTCGTCTTGATCTCAAAGGCCAGGTTTGCCACAACACAGGTGGGGTTCGTCTaGATCTCAAAGGCCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSGQVGFVLISKARFATTQVGFV*ISKARF Trigger: AAACCTGGCCTTTGAGATCAAGACGAACCCCACCTG...TGTTGTGGCAAACCTGGCCTTTGAGATCAAGACGAACCCCACCTGCCCTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CAA 90 bp | AGACGGCTTCTCAGGGCAGGTGGGGTTCGTCTTGATCTCAAAGGCCAGGTTTGCGATGCAGCTGACCTTTaGAAGCCATGTTTTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: RRLLRAGGVRLDLKGQVCDAADL*KPCFDK Trigger: TTTATCAAAACATGGCTTCAAAAGGTCAGCTGCATC...GCAAACCTGGCCTTTGAGATCAAGACGAACCCCACCTGCCCTGAGAAGCCGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAACGCCAGGAAAGGAGCGAAGCAGAGGAATTTAGGAAAGGCAATTTATTCTCAAAGGCCAGGTTaGCCACAACATACCCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QSNARKGAKQRNLGKAIYSQRPG*PQHTPH Trigger: ATGAGGGGTATGTTGTGGCAAACCTGGCCTTTGAGA...ATAAATTGCCTTTCCTAAATTCCTCTGCTTCGCTCCTTTCCTGGCGTTGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CAA 90 bp | TTACAGCAACACAGAGAACATAAGCAAGGCATCTTAGCACCTTCTCATCTGCAATCTGCTATTCCTCACTaGAGAAGGAGGGGGAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LQQHREHKQGILAPSHLQSAIPH*RRRGKY Trigger: ATACTTCCCCCTCCTTCTCAAGTGAGGAATAGCAGA...TTGCAGATGAGAAGGTGCTAAGATGCCTTGCTTATGTTCTCTGTGTTGCTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CAA 90 bp | AAGAATTTACCTCTGCAGATGGAATCACTTTGTACTCTTTTTGAGGTGTGGGGAAGCTTAAACATCCCCTaGAAGGAGGTAAGTCACACT | + |
|
Preference number: 5 (lower is better) Translates to: KNLPLQMESLCTLFEVWGSLNIP*KEVSHT Trigger: AGTGTGACTTACCTCCTTCAAGGGGATGTTTAAGCT...TCCCCACACCTCAAAAAGAGTACAAAGTGATTCCATCTGCAGAGGTAAATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CAA 90 bp | AAGAATTTACCTCTGCAGATGGAATCACTTTGTACTCTTTTTGAGGTGTGGGGACATATACCACGGTGTTaGGTGTCAGGAATAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: KNLPLQMESLCTLFEVWGHIPRC*VSGIDT Trigger: TGTGTCTATTCCTGACACCAAACACCGTGGTATATG...TCCCCACACCTCAAAAAGAGTACAAAGTGATTCCATCTGCAGAGGTAAATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS TCA 90 bp | AGTCAGCAAGAATTCTGTAATCCAGTGAAGATGCAGCTGACCTTTTaGAGCCATGTTTTGATAAAGCAGGTAACAGTAAAGTTCCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SQQEFCNPVKMQLTF*SHVLIKQVTVKFLK Trigger: CTTGAGGAACTTTACTGTTACCTGCTTTATCAAAACATGGCTTCAAAAGGTCAGCTGCATCTTCACTGGATTACAGAATTCTTGCTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS-3UTR CAA 90 bp | ATACCCCTCATGGTATTACAGCAACACAGAGAACATAAGCAAGGCATCTTAGCACAAACTTTCACGTGTTaGACAAAAGGAAAATGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IPLMVLQQHREHKQGILAQTFTC*TKGKCL Trigger: GAGACATTTTCCTTTTGTCAAACACGTGAAAGTTTG...TGCTAAGATGCCTTGCTTATGTTCTCTGTGTTGCTGTAATACCATGAGGGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||
| CDS CCA 72 bp | TCAAGCTCCTCGTCCGCCATGGCTCGGCGTCAGCGCTaGAGCAGCCGCGGTCACTCTCGCAGCCCCTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSAMARRQR*SSRGHSRSPSA Trigger: CGCCGAGGGGCTGCGAGAGTGACCGCGGCTGCTCCAGCGCTGACGCCGAGCCATGGCGGACGAGGAGCTTGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000221784.8 ENST00000419343.7 ENST00000590247.7 |
||
| CDS TCA 72 bp | GAATTCTGTAATCCAGTGAAGATGCAGCTGACCTTTTaGAGCCATGTTTTGATAAAGCAGGTAACAGTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EFCNPVKMQLTF*SHVLIKQVTVK Trigger: CTTTACTGTTACCTGCTTTATCAAAACATGGCTTCAAAAGGTCAGCTGCATCTTCACTGGATTACAGAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419343.7 |
||