Pregenerated sensors for PDCD1LG2 (Homo sapiens)
Ensembl gene IDs: ENSG00000197646Ensembl transcript IDs: ENST00000397747.5
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCAGGTGTTGGCTAGTCTTGTTGCAGGTTTCAGATTAAAGTGCTaGGTCATCCAAAGGCATTTGAAAAGTGCAAATGGCAAGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: GQVLASLVAGFRLKC*VIQRHLKSANGKLC Trigger: GCAGAGCTTGCCATTTGCACTTTTCAAATGCCTTTGGATGACCCAGCACTTTAATCTGAAACCTGCAACAAGACTAGCCAACACCTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR GCA 90 bp | TGTAGCCGAGTTACCCTTCTGCTCCACACATATGTAGTGGGATCTTaGAGGATTTCCATAGTGCCAATTATCAAAGGCCTTGACTACTTA | + |
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Preference number: 1 (lower is better) Translates to: CSRVTLLLHTYVVGS*RISIVPIIKGLDYL Trigger: TAAGTAGTCAAGGCCTTTGATAATTGGCACTATGGAAATCCTGCAAGATCCCACTACATATGTGTGGAGCAGAAGGGTAACTCGGCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR TCA 90 bp | AGTGGGATCTTGCAGGATTTCCATAGTGCCAATTATCAAAGGCCTTaGCTACTTAGCATTGCTGTATTACAGATGTGCAAACTGAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: SGILQDFHSANYQRP*LLSIAVLQMCKLRH Trigger: GTGCCTCAGTTTGCACATCTGTAATACAGCAATGCTAAGTAGTCAAGGCCTTTGATAATTGGCACTATGGAAATCCTGCAAGATCCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR TCA 90 bp | CATTATGCTATCAAGATTCCAGTAATCCATAAAACATGTCAATTATaGTTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCTCATAGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: HYAIKIPVIHKTCQL*FEFVRSPVCELIVS Trigger: TGAGACTATGAGCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGATTACTGGAATCTTGATAGCATAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGGCAAATGGCAAGCTCTaGAGGCCACCGAATTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: IPFAFSLAARRILKEFCGANGKL*RPPNSC Trigger: ACAAGAATTCGGTGGCCTGCAGAGCTTGCCATTTGC...CCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR CCA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGGGGTCCAGGATCCAGTaGGGTAATTCTGTAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LISPKFCSVKELALGPPMGSRIQ*GNSVKC Trigger: GCACTTTACAGAATTACCCCACTGGATCCTGGACCC...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR TCA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCCATAGGCTCCAGAGGTaGGTCCAGATCAGTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SIKHVNYDLSLCEALSVSHRLQR*VQISEG Trigger: CCCTTCACTGATCTGGACTCACCTCTGGAGCCTATG...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR CCA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGTTCATGGCCAGGTGTTaGCTAGTCTTGTTGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LISPKFCSVKELALGPPMFMARC*LVLLQV Trigger: AACCTGCAACAAGACTAGCCAACACCTGGCCATGAA...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTGTGAGTCCAGATCAGTaGAGGGGCAAGTTTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: GNNSFCFQSGSKKDPEGIVSPDQ*RGKFHG Trigger: GCCATGAAACTTGCCCCTTCACTGATCTGGACTCAC...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR GCA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGGGAAATAATTCCTTTTaGTTTCAGTCTGGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LISPKFCSVKELALGPPMGNNSF*FQSGSK Trigger: CTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR GCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTGGTTTCAGATTAAAGTaGTGGGTCATCCAAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GNNSFCFQSGSKKDPEGIGFRLK*WVIQRH Trigger: ATGCCTTTGGATGACCCAGCACTTTAATCTGAAACC...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR CCA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCTTCAGATTAAAGTGCTaGGTCATCCAAAGGCATTTG | + |
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Preference number: 2 (lower is better) Translates to: SIKHVNYDLSLCEALSVSFRLKC*VIQRHL Trigger: CAAATGCCTTTGGATGACCCAGCACTTTAATCTGAA...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGTCCAGGATCCAGTGGGGCAGGCCACCGAATTCTaGTTCAGAGTCCAGAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SGSKKDPEGILWVQDPVGQATEF*FRVQKL Trigger: AAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTG...CCCCACTGGATCCTGGACCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR TCA 72 bp | TTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTaGAGGAATTCTGTGGGTCCAGGATCCAGTGGGGTA | + |
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Preference number: 3 (lower is better) Translates to: FLLLSVWQQEGS*RNSVGPGSSGV Trigger: TACCCCACTGGATCCTGGACCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR CCA 72 bp | AGGATCCTGAAGGAATTCTGTGGGTCCAGGATCCAGTaGGGTAATTCTGTAAAGTGCAGTAGTGCTTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: RILKEFCGSRIQ*GNSVKCSSACL Trigger: TAAGCAAGCACTACTGCACTTTACAGAATTACCCCACTGGATCCTGGACCCACAGAATTCCTTCAGGATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR CAA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGAATTATGATTTGAGTTaGTGCGAAGCCCTGTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: LISPKFCSVKELALGPPMNYDLS*CEALSV Trigger: CACAGACAGGGCTTCGCACAAACTCAAATCATAATT...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR CAA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGAAATTTAAAGTCATATaGAGGGCCAGAAAAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LISPKFCSVKELALGPPMKFKVI*RARKGG Trigger: GCCTCCTTTTCTGGCCCTCAATATGACTTTAAATTT...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR GCA 72 bp | ATTTCACACCCTTTCATTCTCATAAGCCCCAAATTTTaGTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATG | + |
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Preference number: 3 (lower is better) Translates to: ISHPFILISPKF*SVKELALGPPM Trigger: CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAGAATGAAAGGGTGTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTGGGGCTTTGGCCATTTTAGCTACTTATCTGAAATTGCTGCAGATACAACGCCTCAAAAACAGAGCTaGATGACTTTACTCCACAAT | + |
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Preference number: 3 (lower is better) Translates to: VWGFGHFSYLSEIAADTTPQKQS*MTLLHN Trigger: ATTGTGGAGTAAAGTCATCAAGCTCTGTTTTTGAGG...CGTTGTATCTGCAGCAATTTCAGATAAGTAGCTAAAATGGCCAAAGCCCCAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR TCA 72 bp | CTATGTAAGTCTGTTATACTAGCTAATGTGCCCATTTaGATAGTTCAAGGGTCAGCTAATGCTCTGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LCKSVILANVPI*IVQGSANALSF Trigger: GAAGCTCAGAGCATTAGCTGACCCTTGAACTATTCAAATGGGCACATTAGCTAGTATAACAGACTTACATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR TCA 72 bp | ATCAAGATTCCAGTAATCCATAAAACATGTCAATTATaGTTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: IKIPVIHKTCQL*FEFVRSPVCEL Trigger: GAGCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGATTACTGGAATCTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR TCA 72 bp | TTGCAGGATTTCCATAGTGCCAATTATCAAAGGCCTTaGCTACTTAGCATTGCTGTATTACAGATGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LQDFHSANYQRP*LLSIAVLQMCK Trigger: TTTGCACATCTGTAATACAGCAATGCTAAGTAGTCAAGGCCTTTGATAATTGGCACTATGGAAATCCTGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | TCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGTCCAGGATCCAGTGGGGTCAGGGGTCCTGGAGTaGCTGGTGTTGGCAGGAACG | + |
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Preference number: 4 (lower is better) Translates to: SGSKKDPEGILWVQDPVGSGVLE*LVLAGT Trigger: CGTTCCTGCCAACACCAGCCACTCCAGGACCCCTGA...CCCCACTGGATCCTGGACCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | TCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGTCCAGGATCCAGTGGGGAAAGCTGCTATCTGGTaGAGCTGCAATTCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SGSKKDPEGILWVQDPVGKAAIW*SCNSRL Trigger: GAGCCTGGAATTGCAGCTTCACCAGATAGCAGCTTT...CCCCACTGGATCCTGGACCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCGCTCCTCCAGCAAAGTaGCTCTTTCACGGTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVAPPAK*LFHGVG Trigger: CCCCACACCGTGAAAGAGCCACTTTGCTGGAGGAGC...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | TCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGTCCAGGATCCAGTGGGGTTCATGGCCAGGTGTTaGCTAGTCTTGTTGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SGSKKDPEGILWVQDPVGFMARC*LVLLQV Trigger: AACCTGCAACAAGACTAGCCAACACCTGGCCATGAA...CCCCACTGGATCCTGGACCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCTCCCTCACTTGGACTTaGGGTATGTGGAACGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVSLTWT*GMWNEA Trigger: GGCCTCGTTCCACATACCTCAAGTCCAAGTGAGGGA...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGTTCCCTAGGGGCAGCTaGTCCTCCAGCAAAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LISPKFCSVKELALGPPMFPRGS*SSSKVA Trigger: AGCCACTTTGCTGGAGGAGCAGCTGCCCCTAGGGAA...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | ATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGTCCAGAACACACAGCTaGAGTTTCTGCCAGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: IPFAFSLAARRILKEFCGSRTHS*SFCQGV Trigger: CACCCCCTGGCAGAAACTTCAGCTGTGTGTTCTGGA...CCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGCATAGGCTCCAGAGGTaGGTCCAGATCAGTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LISPKFCSVKELALGPPMHRLQR*VQISEG Trigger: CCCTTCACTGATCTGGACTCACCTCTGGAGCCTATG...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTGGCCTTCAGGGGTCCTaGAGTGGCTGGTGTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GNNSFCFQSGSKKDPEGIGLQGS*SGWCWQ Trigger: CTGCCAACACCAGCCACTCCAGGACCCCTGAAGGCC...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCGTGAAGCAGCCAAGTTaGATGGGTCCTGGGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVVKQPS*MGPGFH Trigger: ATGGAACCCAGGACCCATCCAACTTGGCTGCTTCAC...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTGGCGCAGAACACTGGTaGCCTGGTAGAGGCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: GNNSFCFQSGSKKDPEGIGAEHW*PGRGLQ Trigger: CTGAAGGCCTCTACCAGGTCACCAGTGTTCTGCGCC...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | ATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGGCGAAGCCCTGTCTGTaGGCTCATAGTCTCAATAGC | + |
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Preference number: 4 (lower is better) Translates to: IPFAFSLAARRILKEFCGAKPCL*AHSLNS Trigger: GCTATTGAGACTATGAGCTCACAGACAGGGCTTCGC...CCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | TCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGTCCAGGATCCAGTGGGGAATTTAAAGTCATATTaGGGGCCAGAAAAGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SGSKKDPEGILWVQDPVGNLKSY*GPEKEA Trigger: AGCCTCCTTTTCTGGCCCTCAATATGACTTTAAATT...CCCCACTGGATCCTGGACCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCTGGCCAGGATACTTCTaGCAGAGGATAACCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVWPGYF*QRITCS Trigger: GCTACAGGTTATCCTCTGGCAGAAGTATCCTGGCCA...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCGCAAATGGCAAGCTCTaGAGGCCACCGAATTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVANGKL*RPPNSC Trigger: ACAAGAATTCGGTGGCCTGCAGAGCTTGCCATTTGC...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGGGTCAGCTAATGCTCTaGGCTTCATGGCTCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: LISPKFCSVKELALGPPMGQLML*ASWLQY Trigger: ATACTGGAGCCATGAAGCTCAGAGCATTAGCTGACC...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCGTTCTGTATTTGATATaGGGACTTGCCACAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVVLYLI*GLATAP Trigger: TGGAGCTGTGGCAAGTCCTCATATCAAATACAGAAC...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | GTTTGGGGCTTTGGCCATTTTAGCTACTTATCTGAAATTGCTGCAGATACAACGGTGAGTCCAGATCAGTaGAGGGGCAAGTTTCATGGC | + |
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Preference number: 4 (lower is better) Translates to: VWGFGHFSYLSEIAADTTVSPDQ*RGKFHG Trigger: GCCATGAAACTTGCCCCTTCACTGATCTGGACTCAC...CGTTGTATCTGCAGCAATTTCAGATAAGTAGCTAAAATGGCCAAAGCCCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCTATGATTTGAGTTTGTaGGAAGCCCTGTCTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVYDLSL*EALSVS Trigger: GCTCACAGACAGGGCTTCGCACAAACTCAAATCATA...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | GTTTGGGGCTTTGGCCATTTTAGCTACTTATCTGAAATTGCTGCAGATACAACGAGGAACGCTGACGTTTaGCCAGGATACTTCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VWGFGHFSYLSEIAADTTRNADV*PGYFCQ Trigger: CTGGCAGAAGTATCCTGGCCAAACGTCAGCGTTCCT...CGTTGTATCTGCAGCAATTTCAGATAAGTAGCTAAAATGGCCAAAGCCCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCAAGTTGGATGGGTCCTaGGTTCCATCTGACTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVKLDGS*VPSDFE Trigger: TTCAAAGTCAGATGGAACCCAGGACCCATCCAACTT...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCCCTGAAGGAATTCTGTaGGTCCAGGATCCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SIKHVNYDLSLCEALSVSPEGIL*VQDPVG Trigger: CCCCACTGGATCCTGGACCCACAGAATTCCTTCAGG...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTTGTTGGCAGGAACGCTaGCGTTTGGCCAGGATACTT | + |
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Preference number: 4 (lower is better) Translates to: GNNSFCFQSGSKKDPEGICWQER*RLARIL Trigger: AAGTATCCTGGCCAAACGTCAGCGTTCCTGCCAACA...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | ATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGCCAGGGTCACATTGCTaGCATGCTCTATTATGTACA | + |
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Preference number: 4 (lower is better) Translates to: IPFAFSLAARRILKEFCGPGSHC*HALLCT Trigger: TGTACATAATAGAGCATGGCAGCAATGTGACCCTGG...CCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCCAAACTGGCTGTTATTaGTCCAAGGTTCACATGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVQTGCY*SKVHMT Trigger: AGTCATGTGAACCTTGGAGCAATAACAGCCAGTTTG...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCATATCAGGTCACCCTaGCTCCCAAGACCACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GNNSFCFQSGSKKDPEGIHIRSP*LPRPQV Trigger: AACCTGTGGTCTTGGGAGCCAGGGTGACCTGATATG...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | GTTTGGGGCTTTGGCCATTTTAGCTACTTATCTGAAATTGCTGCAGATACAACGGGGTCCAGGATCCAGTaGGGTAATTCTGTAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VWGFGHFSYLSEIAADTTGSRIQ*GNSVKC Trigger: GCACTTTACAGAATTACCCCACTGGATCCTGGACCC...CGTTGTATCTGCAGCAATTTCAGATAAGTAGCTAAAATGGCCAAAGCCCCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGAAAGGAGGCTTAGTTTaGGGCTTTGGCCATTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LISPKFCSVKELALGPPMKGGLV*GFGHFS Trigger: GCTAAAATGGCCAAAGCCCCAAACTAAGCCTCCTTT...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCATCATGTTCTGTATTTaGTATGAGGACTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVIMFCI*YEDLPQ Trigger: CTGTGGCAAGTCCTCATATCAAATACAGAACATGAT...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | GTTTGGGGCTTTGGCCATTTTAGCTACTTATCTGAAATTGCTGCAGATACAACGGTAAGTTCCCTCACGTaGGTATTCCAGAACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VWGFGHFSYLSEIAADTTVSSLT*VFQNTQ Trigger: CTGTGTGTTCTGGAATACTCACGTGAGGGAACTTAC...CGTTGTATCTGCAGCAATTTCAGATAAGTAGCTAAAATGGCCAAAGCCCCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCATGTCAATTATGATTTaGGTTTGTGCGAAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVMSIMI*VCAKPC Trigger: ACAGGGCTTCGCACAAACTCAAATCATAATTGACAT...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | ATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGGTCACATTGCTGCCATaGTCTATTATGTACAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPFAFSLAARRILKEFCGVTLLP*SIMYSS Trigger: GGAACTGTACATAATAGAGCATGGCAGCAATGTGAC...CCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR CCA 90 bp | GTTTGGGGCTTTGGCCATTTTAGCTACTTATCTGAAATTGCTGCAGATACAACGGGCTCTTTCACGGTGTaGGGATGTATCATTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VWGFGHFSYLSEIAADTTGSFTV*GCIIFH Trigger: GTGGAAAATGATACATCCCCACACCGTGAAAGAGCC...CGTTGTATCTGCAGCAATTTCAGATAAGTAGCTAAAATGGCCAAAGCCCCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCTTCAGATTAAAGTGCTaGGTCATCCAAAGGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVFRLKC*VIQRHL Trigger: CAAATGCCTTTGGATGACCCAGCACTTTAATCTGAA...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| 3UTR CAA 72 bp | AGTTACCCTTCTGCTCCACACATATGTAGTGGGATCTaGCAGGATTTCCATAGTGCCAATTATCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SYPSAPHICSGI*QDFHSANYQRP Trigger: AGGCCTTTGATAATTGGCACTATGGAAATCCTGCAAGATCCCACTACATATGTGTGGAGCAGAAGGGTAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR TCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTAGGCGACCCCATAGATaGTTATGCATTGGTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GNNSFCFQSGSKKDPEGIRRPHR*LCIGTV Trigger: GACAGTACCAATGCATAATCATCTATGGGGTCGCCT...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR TCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTAAGGGGATGAAAATGTaGAGCAGCCAAGTTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GNNSFCFQSGSKKDPEGIKGMKM*SSQVGW Trigger: CCATCCAACTTGGCTGCTTCACATTTTCATCCCCTT...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGCAGGCCACCGAATTCTTGTTCAGAGTCCAGAAGCTTCTTTAGATGTCAATTATCAAAGGCCTTaGCTACTTAGCATTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSAGHRILVQSPEASLDVNYQRP*LLSIAV Trigger: TACAGCAATGCTAAGTAGTCAAGGCCTTTGATAATT...GACATCTAAAGAAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTGCAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR GCA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGTTTGATATGAGGACTTaGCACAGCTCCACAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LISPKFCSVKELALGPPMFDMRT*HSSTSK Trigger: TTTACTTGTGGAGCTGTGGCAAGTCCTCATATCAAA...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTTCCTGTAGGAAGCTTTaGCTTTCAGAGTCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GNNSFCFQSGSKKDPEGISCRKL*LSESGT Trigger: AGTACCTGACTCTGAAAGTCAAAGCTTCCTACAGGA...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | ATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGTGCAAACTGAGGCACTaGAAAGTCAAATTTAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPFAFSLAARRILKEFCGCKLRH*KVKFKV Trigger: GACTTTAAATTTGACTTTTCAGTGCCTCAGTTTGCA...CCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR TCA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCGCTAATGTGCCCATTTaGATAGTTCAAGGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIKHVNYDLSLCEALSVSANVPI*IVQGSA Trigger: AGCTGACCCTTGAACTATTCAAATGGGCACATTAGC...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | GTTTGGGGCTTTGGCCATTTTAGCTACTTATCTGAAATTGCTGCAGATACAACGACAAAACAATCAACATaGAGTAGCTCCAACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWGFGHFSYLSEIAADTTTKQST*SSSNPG Trigger: TCCTGGGTTGGAGCTACTGCATGTTGATTGTTTTGT...CGTTGTATCTGCAGCAATTTCAGATAAGTAGCTAAAATGGCCAAAGCCCCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCCCACCTTTTGCAAACTaGCTGTTATTGCTCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SIKHVNYDLSLCEALSVSPPFAN*LLLLQG Trigger: ACCTTGGAGCAATAACAGCCAGTTTGCAAAAGGTGG...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | GGAAATAATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTATTCCAGGGTCACATTaGTGCCATGCTCTATTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GNNSFCFQSGSKKDPEGIIPGSH*CHALLC Trigger: ACATAATAGAGCATGGCAGCAATGTGACCCTGGAAT...AATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAATTATTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCGGTTTCAGATTAAAGTaGTGGGTCATCCAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SIKHVNYDLSLCEALSVSGFRLK*WVIQRH Trigger: ATGCCTTTGGATGACCCAGCACTTTAATCTGAAACC...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCTATGTAGTGGGATCTTaGAGGATTTCCATAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIKHVNYDLSLCEALSVSYVVGS*RISIVP Trigger: TGGCACTATGGAAATCCTGCAAGATCCCACTACATA...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR TCA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCTACAGATGTGCAAACTaGGGCACTGAAAAGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIKHVNYDLSLCEALSVSYRCAN*GTEKSN Trigger: ATTTGACTTTTCAGTGCCTCAGTTTGCACATCTGTA...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR GCA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCATAAGCCCCAAATTTTaGTCAGTTAAGGAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIKHVNYDLSLCEALSVSISPKF*SVKELA Trigger: AGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTAT...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CCA 90 bp | GTTTGGGGCTTTGGCCATTTTAGCTACTTATCTGAAATTGCTGCAGATACAACGATCTGTTTCTGTTACTaGAAATTTCCACACACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VWGFGHFSYLSEIAADTTICFCY*KFPHTS Trigger: AGAGGTGTGTGGAAATTTCCAGTAACAGAAACAGAT...CGTTGTATCTGCAGCAATTTCAGATAAGTAGCTAAAATGGCCAAAGCCCCAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS CCA 90 bp | TTCAGGGGTCCTGGAGTGGCTGGTGTTGGCAGGAACGCTGACGTTTaGCCAGGATACTTCTGCCAGAGGATAACCTGTAGCCTGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FRGPGVAGVGRNADV*PGYFCQRITCSLAG Trigger: ACCTGCCAGGCTACAGGTTATCCTCTGGCAGAAGTATCCTGGCCAAACGTCAGCGTTCCTGCCAACACCAGCCACTCCAGGACCCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS GCA 90 bp | GTGGCTGGTGTTGGCAGGAACGCTGACGTTTGGCCAGGATACTTCTaGCAGAGGATAACCTGTAGCCTGGCAGGTGAGCTCTACCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VAGVGRNADVWPGYF*QRITCSLAGELYLI Trigger: GATGAGGTAGAGCTCACCTGCCAGGCTACAGGTTATCCTCTGGCAGAAGTATCCTGGCCAAACGTCAGCGTTCCTGCCAACACCAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | TCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGTCCAGGATCCAGTGGGGTGTGAAGCAGCCAAGTaGGATGGGTCCTGGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSKKDPEGILWVQDPVGCEAAK*DGSWVP Trigger: TGGAACCCAGGACCCATCCAACTTGGCTGCTTCACA...CCCCACTGGATCCTGGACCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | TCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGTCCAGGATCCAGTGGGGCATGTCAATTATGATTaGAGTTTGTGCGAAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGSKKDPEGILWVQDPVGHVNYD*SLCEAL Trigger: CAGGGCTTCGCACAAACTCAAATCATAATTGACATG...CCCCACTGGATCCTGGACCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGTCCTTCGTCCCTCACTaGGACTTGAGGTATGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LISPKFCSVKELALGPPMSFVPH*DLRYVE Trigger: TTCCACATACCTCAAGTCCAAGTGAGGGACGAAGGA...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | CTCATAAGCCCCAAATTTTGCTCAGTTAAGGAGCTTGCTTTAGGCCCACCTATGTTTCATGGCCAGGTGTaGGCTAGTCTTGTTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LISPKFCSVKELALGPPMFHGQV*ASLVAG Trigger: ACCTGCAACAAGACTAGCCAACACCTGGCCATGAAA...CATAGGTGGGCCTAAAGCAAGCTCCTTAACTGAGCAAAATTTGGGGCTTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | ATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGCATTCCAGGGTCACATaGCTGCCATGCTCTATTATG | + |
|
Preference number: 5 (lower is better) Translates to: IPFAFSLAARRILKEFCGHSRVT*LPCSIM Trigger: CATAATAGAGCATGGCAGCAATGTGACCCTGGAATG...CCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCGTCCCTCACTTGGACTaGAGGTATGTGGAACGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SIKHVNYDLSLCEALSVSVPHLD*RYVERG Trigger: GCCTCGTTCCACATACCTCAAGTCCAAGTGAGGGAC...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS TCA 90 bp | TTTTCCACCTTTTGCAAACTGGCTGTTATTGCTCCAAGGTTCACATaGCTTCCAGTGTCAAAGTTGCATTCCAGGGTCACATTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSTFCKLAVIAPRFT*LPVSKLHSRVTLLP Trigger: TGGCAGCAATGTGACCCTGGAATGCAACTTTGACACTGGAAGTCATGTGAACCTTGGAGCAATAACAGCCAGTTTGCAAAAGGTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | ATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGATATGTAGTGGGATCTaGCAGGATTTCCATAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPFAFSLAARRILKEFCGICSGI*QDFHSA Trigger: GGCACTATGGAAATCCTGCAAGATCCCACTACATAT...CCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS GCA 90 bp | TGGCTGTTATTGCTCCAAGGTTCACATGACTTCCAGTGTCAAAGTTaGATTCCAGGGTCACATTGCTGCCATGCTCTATTATGTACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WLLLLQGSHDFQCQS*IPGSHCCHALLCTV Trigger: AACTGTACATAATAGAGCATGGCAGCAATGTGACCCTGGAATGCAACTTTGACACTGGAAGTCATGTGAACCTTGGAGCAATAACAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCGGGTTCCATCTGACTTaGAAGGTCAATGCTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SIKHVNYDLSLCEALSVSGFHLT*KVNAGQ Trigger: TTGGCCAGCATTGACCTTCAAAGTCAGATGGAACCC...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCCAGGCCACCGAATTCTaGTTCAGAGTCCAGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SIKHVNYDLSLCEALSVSQATEF*FRVQKL Trigger: AAGCTTCTGGACTCTGAACAAGAATTCGGTGGCCTG...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCCTTCCAGTGTCAAAGTaGCATTCCAGGGTCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: SIKHVNYDLSLCEALSVSLPVSK*HSRVTL Trigger: CAATGTGACCCTGGAATGCAACTTTGACACTGGAAG...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS-3UTR CAA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCGCAAACTGGCTGTTATaGCTCCAAGGTTCACATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SIKHVNYDLSLCEALSVSANWLL*LQGSHD Trigger: GTCATGTGAACCTTGGAGCAATAACAGCCAGTTTGC...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR CAA 90 bp | ATTCCTTTTGCTTTCAGTCTGGCAGCAAGAAGGATCCTGAAGGAATTCTGTGGGAAATTTAAAGTCATATaGAGGGCCAGAAAAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPFAFSLAARRILKEFCGKFKVI*RARKGG Trigger: GCCTCCTTTTCTGGCCCTCAATATGACTTTAAATTT...CCCACAGAATTCCTTCAGGATCCTTCTTGCTGCCAGACTGAAAGCAAAAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR CAA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCATAGATGATTATGCATaGGTACTGTCCTTCGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SIKHVNYDLSLCEALSVSIDDYA*VLSFVP Trigger: AGGGACGAAGGACAGTACCAATGCATAATCATCTAT...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR CAA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCAATTATGATTTGAGTTaGTGCGAAGCCCTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SIKHVNYDLSLCEALSVSNYDLS*CEALSV Trigger: CACAGACAGGGCTTCGCACAAACTCAAATCATAATT...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS-3UTR CAA 90 bp | TCCATAAAACATGTCAATTATGATTTGAGTTTGTGCGAAGCCCTGTCTGTGAGCCCTCAAAAACAGAGCTaGATGACTTTACTCCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SIKHVNYDLSLCEALSVSPQKQS*MTLLHN Trigger: ATTGTGGAGTAAAGTCATCAAGCTCTGTTTTTGAGG...GCTCACAGACAGGGCTTCGCACAAACTCAAATCATAATTGACATGTTTTATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397747.5 |
||
| CDS TCA 72 bp | TTCTGCCAGGGGGTGGCTTTAGGCGCAGAACACTGGTaGCCTGGTAGAGGCCTTCAGGGGTCCTGGAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FCQGVALGAEHW*PGRGLQGSWSG Trigger: GCCACTCCAGGACCCCTGAAGGCCTCTACCAGGTCACCAGTGTTCTGCGCCTAAAGCCACCCCCTGGCAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS TCA 72 bp | CAGGGGTCCTGGAGTGGCTGGTGTTGGCAGGAACGCTaGCGTTTGGCCAGGATACTTCTGCCAGAGGATAAC | + |
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Preference number: 6 (lower is better) Translates to: QGSWSGWCWQER*RLARILLPEDN Trigger: GTTATCCTCTGGCAGAAGTATCCTGGCCAAACGTCAGCGTTCCTGCCAACACCAGCCACTCCAGGACCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS GCA 72 bp | GTTGGCAGGAACGCTGACGTTTGGCCAGGATACTTCTaGCAGAGGATAACCTGTAGCCTGGCAGGTGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: VGRNADVWPGYF*QRITCSLAGEL Trigger: GAGCTCACCTGCCAGGCTACAGGTTATCCTCTGGCAGAAGTATCCTGGCCAAACGTCAGCGTTCCTGCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS CCA 72 bp | CCTGGAGTGGCTGGTGTTGGCAGGAACGCTGACGTTTaGCCAGGATACTTCTGCCAGAGGATAACCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PGVAGVGRNADV*PGYFCQRITCS Trigger: GCTACAGGTTATCCTCTGGCAGAAGTATCCTGGCCAAACGTCAGCGTTCCTGCCAACACCAGCCACTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS TCA 72 bp | ATGCATTGGTACTGTCCTTCGTCCCTCACTTGGACTTaGGGTATGTGGAACGAGGCCTTCCCTAGGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: MHWYCPSSLTWT*GMWNEAFPRGS Trigger: GCTGCCCCTAGGGAAGGCCTCGTTCCACATACCTCAAGTCCAAGTGAGGGACGAAGGACAGTACCAATGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS CCA 72 bp | CAGCTGCTCCTCCAGCAAAGTGGCTCTTTCACGGTGTaGGGATGTATCATTTTCCACCTTTTGCAAACTGGC | + |
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Preference number: 6 (lower is better) Translates to: QLLLQQSGSFTV*GCIIFHLLQTG Trigger: GCCAGTTTGCAAAAGGTGGAAAATGATACATCCCCACACCGTGAAAGAGCCACTTTGCTGGAGGAGCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS CAA 72 bp | CTTGTAGTCCCAGGCGACCCCATAGATGATTATGCATaGGTACTGTCCTTCGTCCCTCACTTGGACTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LVVPGDPIDDYA*VLSFVPHLDLR Trigger: CCTCAAGTCCAAGTGAGGGACGAAGGACAGTACCAATGCATAATCATCTATGGGGTCGCCTGGGACTACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS TCA 72 bp | GAGTCAGGTACTTGTAGTCCCAGGCGACCCCATAGATaGTTATGCATTGGTACTGTCCTTCGTCCCTCACTT | + |
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Preference number: 6 (lower is better) Translates to: ESGTCSPRRPHR*LCIGTVLRPSL Trigger: AAGTGAGGGACGAAGGACAGTACCAATGCATAATCATCTATGGGGTCGCCTGGGACTACAAGTACCTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS CAA 90 bp | AGTCAGGTACTTGTAGTCCCAGGCGACCCCATAGATGATTATGCATaGGTACTGTCCTTCGTCCCTCACTTGGACTTGAGGTATGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SQVLVVPGDPIDDYA*VLSFVPHLDLRYVE Trigger: TTCCACATACCTCAAGTCCAAGTGAGGGACGAAGGACAGTACCAATGCATAATCATCTATGGGGTCGCCTGGGACTACAAGTACCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS GCA 72 bp | GTGTCAAAGTTGCATTCCAGGGTCACATTGCTGCCATaGTCTATTATGTACAGTTCCTTAGGGACTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: VSKLHSRVTLLP*SIMYSSLGTVT Trigger: AGTGACAGTCCCTAAGGAACTGTACATAATAGAGCATGGCAGCAATGTGACCCTGGAATGCAACTTTGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS TCA 72 bp | TTTTGCAAACTGGCTGTTATTGCTCCAAGGTTCACATaGCTTCCAGTGTCAAAGTTGCATTCCAGGGTCACA | + |
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Preference number: 6 (lower is better) Translates to: FCKLAVIAPRFT*LPVSKLHSRVT Trigger: TGTGACCCTGGAATGCAACTTTGACACTGGAAGTCATGTGAACCTTGGAGCAATAACAGCCAGTTTGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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| CDS CAA 72 bp | ATGTATCATTTTCCACCTTTTGCAAACTGGCTGTTATaGCTCCAAGGTTCACATGACTTCCAGTGTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: MYHFPPFANWLL*LQGSHDFQCQS Trigger: ACTTTGACACTGGAAGTCATGTGAACCTTGGAGCAATAACAGCCAGTTTGCAAAAGGTGGAAAATGATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397747.5 |
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