RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDCD10 (Homo sapiens)

Ensembl gene IDs: ENSG00000114209

Ensembl transcript IDs: ENST00000392750.7, ENST00000461494.5, ENST00000473645.6, ENST00000483451.5, ENST00000492396.5, ENST00000494502.6, ENST00000497056.6

Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TTCTACATCATCAGCTGCCATACGAAGAAGGGACTCCGTGAAGTTAACTTCCACTTCTGTAATCACACTTaGTGTTTGTTTCCTGTAGGA +
Preference number: 2 (lower is better)
Translates to: FYIISCHTKKGLREVNFHFCNHT*CLFPVG
Trigger: TCCTACAGGAAACAAACATCAAGTGTGATTACAGAA...GTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494502.6
3UTR GCA 72 bp TGGTCGTTCAATCATATACTCTTCTACATCATCAGCTaGCATACGAAGAAGGGACTCCGTGAAGTTAACTTC +
Preference number: 3 (lower is better)
Translates to: WSFNHILFYIIS*HTKKGLREVNF
Trigger: GAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAAGAGTATATGATTGAACGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494502.6
3UTR-3UTR CAA 90 bp TTCTACATCATCAGCTGCCATACGAAGAAGGGACTCCGTGAAGTTAACTTCCACTTTCATAATGATGTCTaGTGTGAGACCTGGATTTTC +
Preference number: 3 (lower is better)
Translates to: FYIISCHTKKGLREVNFHFHNDV*CETWIF
Trigger: GAAAATCCAGGTCTCACACAAGACATCATTATGAAA...GTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494502.6
CDS-3UTR TCA 90 bp TTCTACATCATCAGCTGCCATACGAAGAAGGGACTCCGTGAAGTTAACTTCCACGGAGAAAGCAGCAACTaGGGCACTGACTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: FYIISCHTKKGLREVNFHGESSN*GTDFTS
Trigger: GGAAGTGAAGTCAGTGCCTCAGTTGCTGCTTTCTCC...GTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494502.6
CDS-3UTR GCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACCCCGTCCGCTCCGCCTaGCAGAACCAAGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYPVRSA*QNQAQV
Trigger: CACTTGGGCTTGGTTCTGGCAGGCGGAGCGGACGGG...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR GCA 90 bp TCTACATCATCAGCTGCCATACGAAGAAGGGACTCCGTGAAGTTAACTTCCACGTTCTACATCATCAGCTaGCATACGAAGAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: STSSAAIRRRDSVKLTSTFYIIS*HTKKGL
Trigger: GAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA...CGTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494502.6
CDS-3UTR CCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACCAAGTGCCTCAGCCATaGCCCCTGCGTGACCCTAGA +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYQVPQP*PLRDPR
Trigger: TCTAGGGTCACGCAGGGGCCATGGCTGAGGCACTTG...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR TCA 90 bp TTCTACATCATCAGCTGCCATACGAAGAAGGGACTCCGTGAAGTTAACTTCCACACCTCACTCTGTCATTaGTCTCATCTGGGATCTTAC +
Preference number: 4 (lower is better)
Translates to: FYIISCHTKKGLREVNFHTSLCH*SHLGSY
Trigger: GTAAGATCCCAGATGAGATCAATGACAGAGTGAGGT...GTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494502.6
CDS-3UTR GCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACACCTCTTCTGCTCGGTaGAGAGCTACGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNTSSAR*RATGTG
Trigger: CCCAGTCCCCGTAGCTCTGCACCGAGCAGAAGAGGT...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR GCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACCTCAGCCATGGCCCCTaGGTGACCCTAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNLSHGP*VTLDLF
Trigger: GAAGAGGTCTAGGGTCACGCAGGGGCCATGGCTGAG...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR GCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAACCCTAGACCTCTTCTaGTCGGTGCAGAGCTACGGG +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNITLDLF*SVQSYG
Trigger: CCCGTAGCTCTGCACCGAGCAGAAGAGGTCTAGGGT...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR TCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACCACCTTACCAGCAACTaGGGCACTGACTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYHLTSN*GTDFTS
Trigger: GGAAGTGAAGTCAGTGCCTCAGTTGCTGGTAAGGTG...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR GCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACTCTTCCTTCTTCCAGTaGTCCTCTTCCGCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNSSFFQ*SSSARR
Trigger: CCTACGGGCGGAAGAGGAGCACTGGAAGAAGGAAGA...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR CCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACCAGAGCTACGGGGACTaGGACAGAACAGCTACACCT +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNQSYGD*DRTATP
Trigger: AGGTGTAGCTGTTCTGTCCCAGTCCCCGTAGCTCTG...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR TCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACGGAGAAAGCAGCAACTaGGGCACTGACTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNGESSN*GTDFTS
Trigger: GGAAGTGAAGTCAGTGCCTCAGTTGCTGCTTTCTCC...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473645.6
CDS-3UTR GCA 90 bp TTCTACATCATCAGCTGCCATACGAAGAAGGGACTCCGTGAAGTTAACTTCCACAAAGCAGTGCTAAAATaGAGAGGAATCTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: FYIISCHTKKGLREVNFHKAVLK*RGIFIH
Trigger: GTGAATGAAGATTCCTCTGCATTTTAGCACTGCTTT...GTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494502.6
CDS-3UTR TCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAACACTGATCAGCAACTaGGGCACTGACTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNITLISN*GTDFTS
Trigger: GGAAGTGAAGTCAGTGCCTCAGTTGCTGATCAGTGT...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497056.6
CDS-3UTR GCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACCTTTTGGTGTTCAAGTaGCCTGCGGTTCTGGTATTG +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYLLVFK*PAVLVL
Trigger: CAATACCAGAACCGCAGGGCACTTGAACACCAAAAG...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR GCA 90 bp TTCTACATCATCAGCTGCCATACGAAGAAGGGACTCCGTGAAGTTAACTTCCACTTGTTTCCTGTAGGATaGCTGCCAATTTTAATCATT +
Preference number: 4 (lower is better)
Translates to: FYIISCHTKKGLREVNFHLFPVG*LPILII
Trigger: AATGATTAAAATTGGCAGGCATCCTACAGGAAACAA...GTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494502.6
CDS-3UTR GCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACTTCTACATCATCAGCTaGCATACGAAGAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYFYIIS*HTKKGL
Trigger: GAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR GCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACGGTGTTCAAGTGCCCTaGGGTTCTGGTATTGATATT +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYGVQVP*GSGIDI
Trigger: AATATCAATACCAGAACCGCAGGGCACTTGAACACC...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR GCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATACTTTTGGTGTTCAAGTaGCCTGCGGTTCTGGTATTG +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNILLVFK*PAVLVL
Trigger: CAATACCAGAACCGCAGGGCACTTGAACACCAAAAG...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR GCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACCTTTTGGTGTTCAAGTaGCCTGCGGTTCTGGTATTG +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNLLVFK*PAVLVL
Trigger: CAATACCAGAACCGCAGGGCACTTGAACACCAAAAG...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACTCCCATTCAACATCCTaGATTAGATCCCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYSHSTS*IRSLQE
Trigger: CTCCTGAAGGGATCTAATCCAGGATGTTGAATGGGA...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392750.7
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR TCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAACCTCACTCTGTCATTaGTCTCATCTGGGATCTTAC +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNITSLCH*SHLGSY
Trigger: GTAAGATCCCAGATGAGATCAATGACAGAGTGAGGT...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR TCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACACCTCACTCTGTCATTaGTCTCATCTGGGATCTTAC +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNTSLCH*SHLGSY
Trigger: GTAAGATCCCAGATGAGATCAATGACAGAGTGAGGT...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR TCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAATTGTGCAAAGCTTATaGGGGCCCAGTATACGAAAG +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIIVQSL*GPSIRK
Trigger: CTTTCGTATACTGGGCCCTCATAAGCTTTGCACAAT...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR GCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACTTCTACATCATCAGCTaGCATACGAAGAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNFYIIS*HTKKGL
Trigger: GAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR GCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATTCTACATCATCAGCTaGCATACGAAGAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIFYIIS*HTKKGL
Trigger: GAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR GCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAGGTGTTCAAGTGCCCTaGGGTTCTGGTATTGATATT +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIGVQVP*GSGIDI
Trigger: AATATCAATACCAGAACCGCAGGGCACTTGAACACC...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR GCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACGGTGTTCAAGTGCCCTaGGGTTCTGGTATTGATATT +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNGVQVP*GSGIDI
Trigger: AATATCAATACCAGAACCGCAGGGCACTTGAACACC...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACTTTTCGTTTAGGTCTTaGAATTCTGGCTCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYFSFRS*NSGSGR
Trigger: ACGACCAGAGCCAGAATTCCAAGACCTAAACGAAAA...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACTCCCATTCAACATCCTaGATTAGATCCCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNSHSTS*IRSLQE
Trigger: CTCCTGAAGGGATCTAATCCAGGATGTTGAATGGGA...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392750.7
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATCCCATTCAACATCCTaGATTAGATCCCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNISHSTS*IRSLQE
Trigger: CTCCTGAAGGGATCTAATCCAGGATGTTGAATGGGA...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392750.7
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR TCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACTCATTAAACTGGAACTaGATCCGTAGACCCCAACAT +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNSLNWN*IRRPQH
Trigger: ATGTTGGGGTCTACGGATTCAGTTCCAGTTTAATGA...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR TCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACTTCAGGCCACAGTTTTaGAGGTCTGAAGTATTAAGT +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYFRPQF*RSEVLS
Trigger: ACTTAATACTTCAGACCTTCAAAACTGTGGCCTGAA...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR TCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACGTTCAATACTGCCACTaGGAAGTACATCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYVQYCH*EVHLLT
Trigger: TGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAAC...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATTTTCGTTTAGGTCTTaGAATTCTGGCTCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIFSFRS*NSGSGR
Trigger: ACGACCAGAGCCAGAATTCCAAGACCTAAACGAAAA...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACTTTTCGTTTAGGTCTTaGAATTCTGGCTCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNFSFRS*NSGSGR
Trigger: ACGACCAGAGCCAGAATTCCAAGACCTAAACGAAAA...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR TCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACTTCAGGCCACAGTTTTaGAGGTCTGAAGTATTAAGT +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNFRPQF*RSEVLS
Trigger: ACTTAATACTTCAGACCTTCAAAACTGTGGCCTGAA...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR TCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACGTTCAATACTGCCACTaGGAAGTACATCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNVQYCH*EVHLLT
Trigger: TGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAAC...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR TCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAGTTCAATACTGCCACTaGGAAGTACATCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIVQYCH*EVHLLT
Trigger: TGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAAC...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR GCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACAAAGCAGTGCTAAAATaGAGAGGAATCTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYKAVLK*RGIFIH
Trigger: GTGAATGAAGATTCCTCTGCATTTTAGCACTGCTTT...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000497056.6
CDS-3UTR CCA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACGATGAATTAGTCGGTTaGCACTTACGAACACATTTA +
Preference number: 4 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYDELVG*HLRTHL
Trigger: TAAATGTGTTCGTAAGTGCCAACCGACTAATTCATC...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR GCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAAAAGCAGTGCTAAAATaGAGAGGAATCTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIKAVLK*RGIFIH
Trigger: GTGAATGAAGATTCCTCTGCATTTTAGCACTGCTTT...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000497056.6
CDS-3UTR GCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACAAAGCAGTGCTAAAATaGAGAGGAATCTTCATTCAC +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNKAVLK*RGIFIH
Trigger: GTGAATGAAGATTCCTCTGCATTTTAGCACTGCTTT...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000497056.6
CDS-3UTR CCA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAGATGAATTAGTCGGTTaGCACTTACGAACACATTTA +
Preference number: 4 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIDELVG*HLRTHL
Trigger: TAAATGTGTTCGTAAGTGCCAACCGACTAATTCATC...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CCA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACGATGAATTAGTCGGTTaGCACTTACGAACACATTTA +
Preference number: 4 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNDELVG*HLRTHL
Trigger: TAAATGTGTTCGTAAGTGCCAACCGACTAATTCATC...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS GCA 90 bp GCTCCGCCTGCCAGAACCAAGCCCAAGTGCCTCAGCCATGGCCCCTaGGTGACCCTAGACCTCTTCTGCTCGGTGCAGAGCTACGGGGAC +
Preference number: 5 (lower is better)
Translates to: APPARTKPKCLSHGP*VTLDLFCSVQSYGD
Trigger: GTCCCCGTAGCTCTGCACCGAGCAGAAGAGGTCTAGGGTCACGCAGGGGCCATGGCTGAGGCACTTGGGCTTGGTTCTGGCAGGCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392750.7
ENST00000483451.5
CDS GCA 90 bp CCCAAGTGCCTCAGCCATGGCCCCTGCGTGACCCTAGACCTCTTCTaGTCGGTGCAGAGCTACGGGGACTGGGACAGAACAGCTACACCT +
Preference number: 5 (lower is better)
Translates to: PKCLSHGPCVTLDLF*SVQSYGDWDRTATP
Trigger: AGGTGTAGCTGTTCTGTCCCAGTCCCCGTAGCTCTGCACCGAGCAGAAGAGGTCTAGGGTCACGCAGGGGCCATGGCTGAGGCACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392750.7
ENST00000483451.5
CDS-3UTR CAA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACAAGAGGAACCAGGCGTaGTCCGGAATCCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYKRNQA*SGILPS
Trigger: GCTGGGCAGGATTCCGGACAACGCCTGGTTCCTCTT...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473645.6
ENST00000497056.6
CDS-3UTR CAA 90 bp TTCTACATCATCAGCTGCCATACGAAGAAGGGACTCCGTGAAGTTAACTTCCACCTTTCCTTTTTGCCCTaGATGAAAGCGGCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: FYIISCHTKKGLREVNFHLSFLP*MKAALS
Trigger: ACTGAGAGCCGCTTTCATCAAGGGCAAAAAGGAAAG...GTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494502.6
CDS-3UTR CAA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAAAGAGGAACCAGGCGTaGTCCGGAATCCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIKRNQA*SGILPS
Trigger: GCTGGGCAGGATTCCGGACAACGCCTGGTTCCTCTT...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473645.6
ENST00000497056.6
CDS-3UTR CAA 90 bp TCTACATCATCAGCTGCCATACGAAGAAGGGACTCCGTGAAGTTAACTTCCACGGATTTTCTTTCCTTTTaGCCCTTGATGAAAGCGGCT +
Preference number: 5 (lower is better)
Translates to: STSSAAIRRRDSVKLTSTDFLSF*PLMKAA
Trigger: AGCCGCTTTCATCAAGGGCAAAAAGGAAAGAAAATC...CGTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494502.6
CDS-3UTR CAA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACGCACTAGCTATATCCTaGATTGTCTGCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYALAIS*IVCRNL
Trigger: GAGGTTTCTGCAGACAATCAAGGATATAGCTAGTGC...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CAA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACTTTTCTTTTTCAGCCTaGATGAAAGCGGCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYFSFSA*MKAALS
Trigger: ACTGAGAGCCGCTTTCATCAAGGCTGAAAAAGAAAA...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CAA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAGCACTAGCTATATCCTaGATTGTCTGCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIALAIS*IVCRNL
Trigger: GAGGTTTCTGCAGACAATCAAGGATATAGCTAGTGC...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CAA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACGCACTAGCTATATCCTaGATTGTCTGCAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNALAIS*IVCRNL
Trigger: GAGGTTTCTGCAGACAATCAAGGATATAGCTAGTGC...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CAA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATTTTCTTTTTCAGCCTaGATGAAAGCGGCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIFSFSA*MKAALS
Trigger: ACTGAGAGCCGCTTTCATCAAGGCTGAAAAAGAAAA...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CAA 90 bp AAATTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACTTTTCTTTTTCAGCCTaGATGAAAGCGGCTCTCAGT +
Preference number: 5 (lower is better)
Translates to: KFTDKGSSILPLRSTSLNFSFSA*MKAALS
Trigger: ACTGAGAGCCGCTTTCATCAAGGCTGAAAAAGAAAA...GTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CAA 90 bp ACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATACTTTCATAATGATGTCTaGTGTGAGACCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: TDKGSSILPLRSTSLNIYFHNDV*CETWIF
Trigger: GAAAATCCAGGTCTCACACAAGACATCATTATGAAA...GTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS-3UTR CAA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATAAGACATTACACCAAGTaGTCTTGGTCTTCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIRHYTK*SWSSVH
Trigger: ATGAACAGAAGACCAAGACAACTTGGTGTAATGTCT...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392750.7
CDS-3UTR CAA 90 bp TTTACAGATAAAGGCAGTTCAATACTGCCACTGAGAAGTACATCTCTTAACATATTTCATAATGATGTCTaGTGTGAGACCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: FTDKGSSILPLRSTSLNIFHNDV*CETWIF
Trigger: GAAAATCCAGGTCTCACACAAGACATCATTATGAAA...TATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392750.7
ENST00000461494.5
ENST00000473645.6
ENST00000492396.5
ENST00000497056.6
CDS GCA 72 bp CTCAGCCATGGCCCCTGCGTGACCCTAGACCTCTTCTaGTCGGTGCAGAGCTACGGGGACTGGGACAGAACA +
Preference number: 6 (lower is better)
Translates to: LSHGPCVTLDLF*SVQSYGDWDRT
Trigger: TGTTCTGTCCCAGTCCCCGTAGCTCTGCACCGAGCAGAAGAGGTCTAGGGTCACGCAGGGGCCATGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392750.7
ENST00000483451.5
CDS CCA 72 bp CTAGACCTCTTCTGCTCGGTGCAGAGCTACGGGGACTaGGACAGAACAGCTACACCTTACCAGCAACTGAGG +
Preference number: 6 (lower is better)
Translates to: LDLFCSVQSYGD*DRTATPYQQLR
Trigger: CCTCAGTTGCTGGTAAGGTGTAGCTGTTCTGTCCCAGTCCCCGTAGCTCTGCACCGAGCAGAAGAGGTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392750.7
ENST00000483451.5