Pregenerated sensors for PDC (Homo sapiens)

Ensembl gene IDs: ENSG00000116703

Ensembl transcript IDs: ENST00000391997.3, ENST00000497198.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TCCAGCTCATACACAAACCCATATCTAGGCCCAAAACTCAGCTTCTaGTGCATATCCTGCATACACTGTCTACGGTATTTACGAAGGCAG	+
Preference number: 5 (lower is better) Translates to: SSSYTNPYLGPKLSF*CISCIHCLRYLRRQ Trigger: CTGCCTTCGTAAATACCGTAGACAGTGTATGCAGGATATGCACCAGAAGCTGAGTTTTGGGCCTAGATATGGGTTTGTGTATGAGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391997.3 ENST00000497198.1
CDS TCA 90 bp	ATCTTTCTGCTGACTCGTTCCTTTGAATCTTTGCCATTCCTACTCTaGGGAGAAGACATTTGCCTGAGAATCTCCTTCTTGCTAGGTGGA	+
Preference number: 5 (lower is better) Translates to: IFLLTRSFESLPFLL*GEDICLRISFLLGG Trigger: TCCACCTAGCAAGAAGGAGATTCTCAGGCAAATGTCTTCTCCTCAGAGTAGGAATGGCAAAGATTCAAAGGAACGAGTCAGCAGAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391997.3 ENST00000497198.1
CDS GCA 90 bp	AGCTCATACACAAACCCATATCTAGGCCCAAAACTCAGCTTCTGGTaGATATCCTGCATACACTGTCTACGGTATTTACGAAGGCAGTTT	+
Preference number: 5 (lower is better) Translates to: SSYTNPYLGPKLSFW*ISCIHCLRYLRRQF Trigger: AAACTGCCTTCGTAAATACCGTAGACAGTGTATGCAGGATATGCACCAGAAGCTGAGTTTTGGGCCTAGATATGGGTTTGTGTATGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391997.3 ENST00000497198.1
CDS CCA 90 bp	GGTCCTGTATGTGTGGCCTGTCCTTCAAAGTCTTCCTCCAAACTTTaGCTTTTGGCTTCTTCCATTTTAGGGACTGGATTTGATATAATA	+
Preference number: 5 (lower is better) Translates to: GPVCVACPSKSSSKL*LLASSILGTGFDII Trigger: TATTATATCAAATCCAGTCCCTAAAATGGAAGAAGCCAAAAGCCAAAGTTTGGAGGAAGACTTTGAAGGACAGGCCACACATACAGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391997.3
CDS GCA 90 bp	GACATAGTGAATCTTCATTCAACATCTTCTTCTTCTATTTTGGTATaGTCTAGGACATGTACCTCTCTTTCAGGTAGTAACCCATATTCA	+
Preference number: 5 (lower is better) Translates to: DIVNLHSTSSSSILV*SRTCTSLSGSNPYS Trigger: TGAATATGGGTTACTACCTGAAAGAGAGGTACATGTCCTAGAGCATACCAAAATAGAAGAAGAAGATGTTGAATGAAGATTCACTATGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391997.3 ENST00000497198.1
CDS GCA 72 bp	TATCTAGGCCCAAAACTCAGCTTCTGGTGCATATCCTaGATACACTGTCTACGGTATTTACGAAGGCAGTTT	+
Preference number: 6 (lower is better) Translates to: YLGPKLSFWCIS*IHCLRYLRRQF Trigger: AAACTGCCTTCGTAAATACCGTAGACAGTGTATGCAGGATATGCACCAGAAGCTGAGTTTTGGGCCTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391997.3 ENST00000497198.1
CDS GCA 72 bp	ACAAACCCATATCTAGGCCCAAAACTCAGCTTCTGGTaGATATCCTGCATACACTGTCTACGGTATTTACGA	+
Preference number: 6 (lower is better) Translates to: TNPYLGPKLSFW*ISCIHCLRYLR Trigger: TCGTAAATACCGTAGACAGTGTATGCAGGATATGCACCAGAAGCTGAGTTTTGGGCCTAGATATGGGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391997.3 ENST00000497198.1
CDS CCA 72 bp	TACACAAACCCATATCTAGGCCCAAAACTCAGCTTCTaGTGCATATCCTGCATACACTGTCTACGGTATTTA	+
Preference number: 6 (lower is better) Translates to: YTNPYLGPKLSF*CISCIHCLRYL Trigger: TAAATACCGTAGACAGTGTATGCAGGATATGCACCAGAAGCTGAGTTTTGGGCCTAGATATGGGTTTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391997.3 ENST00000497198.1
CDS CAA 90 bp	GATATTGACATAGTGAATCTTCATTCAACATCTTCTTCTTCTATTTaGGTATGCTCTAGGACATGTACCTCTCTTTCAGGTAGTAACCCA	+
Preference number: 6 (lower is better) Translates to: DIDIVNLHSTSSSSI*VCSRTCTSLSGSNP Trigger: TGGGTTACTACCTGAAAGAGAGGTACATGTCCTAGAGCATACCAAAATAGAAGAAGAAGATGTTGAATGAAGATTCACTATGTCAATATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391997.3 ENST00000497198.1