Pregenerated sensors for PDAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000106244Ensembl transcript IDs: ENST00000350498.8, ENST00000496335.1
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATAACCACCAGGGGACACCTACAGGCCAGGCCAGGCCAGGATCCTaGTGCTGCTTCAGCCTACTGTGGCCTGGAAGGGTCCCTGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: YNHQGTPTGQARPGS*CCFSLLWPGRVPAC Trigger: GCAGGCAGGGACCCTTCCAGGCCACAGTAGGCTGAAGCAGCACCAGGATCCTGGCCTGGCCTGGCCTGTAGGTGTCCCCTGGTGGTTATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR GCA 90 bp | CCTGCTCGGTGCCACCTGACAGATGTCATGCCCCAGGTAGGTATGTaGCCTGAACCTTGCCGGGTGCACGTGCCTGAACGTGGCACCGTA | + |
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Preference number: 1 (lower is better) Translates to: PARCHLTDVMPQVGM*PEPCRVHVPERGTV Trigger: TACGGTGCCACGTTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGTCAGGTGGCACCGAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR CCA 90 bp | CCAGGCCAGGCCAGGATCCTGGTGCTGCTTCAGCCTACTGTGGCCTaGAAGGGTCCCTGCCTGCTGAGGCCTAAGATCCTGACTTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: PGQARILVLLQPTVA*KGPCLLRPKILTWL Trigger: TAGCCAAGTCAGGATCTTAGGCCTCAGCAGGCAGGGACCCTTCCAGGCCACAGTAGGCTGAAGCAGCACCAGGATCCTGGCCTGGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR GCA 90 bp | CACCTGACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTaGCGGGTGCACGTGCCTGAACGTGGCACCGTACCCAGCTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: HLTDVMPQVGMCPEP*RVHVPERGTVPSWV Trigger: TACCCAGCTGGGTACGGTGCCACGTTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGTCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR GCA 90 bp | AGGATCCTGGTGCTGCTTCAGCCTACTGTGGCCTGGAAGGGTCCCTaGCTGCTGAGGCCTAAGATCCTGACTTGGCTAAAGGAGGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: RILVLLQPTVAWKGP*LLRPKILTWLKEGR Trigger: CCTCCCCTCCTTTAGCCAAGTCAGGATCTTAGGCCTCAGCAGGCAGGGACCCTTCCAGGCCACAGTAGGCTGAAGCAGCACCAGGATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR CCA 90 bp | GAACCTTGCCGGGTGCACGTGCCTGAACGTGGCACCGTACCCAGCTaGGTAAAAACGGCTCGAGCACGGAAGCCAAAGGATGGATTGCCA | + |
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Preference number: 1 (lower is better) Translates to: EPCRVHVPERGTVPS*VKTARARKPKDGLP Trigger: TGGCAATCCATCCTTTGGCTTCCGTGCTCGAGCCGTTTTTACCCAGCTGGGTACGGTGCCACGTTCAGGCACGTGCACCCGGCAAGGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR GCA 90 bp | GATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTCCCCACTaGTGTCCATCCTGGGCTGCCACTCCCAAAACTGCCAGTACCAGG | + |
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Preference number: 1 (lower is better) Translates to: DPEAQRPYAKWFPPH*CPSWAATPKTASTR Trigger: CCTGGTACTGGCAGTTTTGGGAGTGGCAGCCCAGGATGGACAGCAGTGGGGAGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR TCA 90 bp | CCTGGGCTGCCACTCCCAAAACTGCCAGTACCAGGTGTCACTGATTaGCTAGTCAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PGLPLPKLPVPGVTD*LVKFLDKGATHSRL Trigger: CAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTGACTAGTCAATCAGTGACACCTGGTACTGGCAGTTTTGGGAGTGGCAGCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR TCA 90 bp | CCATCCTGGGCTGCCACTCCCAAAACTGCCAGTACCAGGTGTCACTaGTTGACTAGTCAAATTCCTGGACAAAGGGGCTACACACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: PSWAATPKTASTRCH*LTSQIPGQRGYTLQ Trigger: CTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTGACTAGTCAATCAGTGACACCTGGTACTGGCAGTTTTGGGAGTGGCAGCCCAGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR GCA 90 bp | CCATCCCCGCATCCTGCTCGGTGCCACCTGACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTaGCGGGTGCACGTGCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PSPHPARCHLTDVMPQVGMCPEP*RVHVPE Trigger: TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACAT...ACCTACCTGGGGCATGACATCTGTCAGGTGGCACCGAGCAGGATGCGGGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR TCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTCCGGGTGCACGTGCCTaGACGTGGCACCGTACCCAG | + |
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Preference number: 2 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVPGARA*TWHRTQ Trigger: CTGGGTACGGTGCCACGTTCAGGCACGTGCACCCGG...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTCTTGCCGGGTGCACGTaGCTGAACGTGGCACCGTAC | + |
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Preference number: 2 (lower is better) Translates to: LANKIDPEAQRPYAKWFPLAGCT*LNVAPY Trigger: GTACGGTGCCACGTTCAGGCACGTGCACCCGGCAAG...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTCAGCCTACTGTGGCCTaGAAGGGTCCCTGCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVQPTVA*KGPCLL Trigger: CAGCAGGCAGGGACCCTTCCAGGCCACAGTAGGCTG...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTCCCCAGGTAGGTATGTaGCCTGAACCTTGCCGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LANKIDPEAQRPYAKWFPPQVGM*PEPCRV Trigger: CACCCGGCAAGGTTCAGGGCACATACCTACCTGGGG...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTTGCTTCAGCCTACTGTaGCCTGGAAGGGTCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVCFSLL*PGRVPA Trigger: GGCAGGGACCCTTCCAGGCCACAGTAGGCTGAAGCA...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTCCGCATCCTGCTCGGTaGCACCTGACAGATGTCATG | + |
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Preference number: 2 (lower is better) Translates to: LANKIDPEAQRPYAKWFPPHPAR*HLTDVM Trigger: CATGACATCTGTCAGGTGGCACCGAGCAGGATGCGG...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTGGCACCGTACCCAGCTaGGTAAAAACGGCTCGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVGTVPS*VKTARA Trigger: TGCTCGAGCCGTTTTTACCCAGCTGGGTACGGTGCC...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR GCA 90 bp | CCGGCCTGGTTGTGGAACTTCACGGGAATTTATTTTGTCATTACAATGTTGGCACTGAACCTTGCCGGGTaGACGTGCCTGAACGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PAWLWNFTGIYFVITMLALNLAG*TCLNVA Trigger: TGCCACGTTCAGGCACGTGCACCCGGCAAGGTTCAG...TGCCAACATTGTAATGACAAAATAAATTCCCGTGAAGTTCCACAACCAGGCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR GCA 90 bp | CCGGCCTGGTTGTGGAACTTCACGGGAATTTATTTTGTCATTACAATGTTGGCAGCCTGGAAGGGTCCCTaGCTGCTGAGGCCTAAGATC | + |
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Preference number: 2 (lower is better) Translates to: PAWLWNFTGIYFVITMLAAWKGP*LLRPKI Trigger: GATCTTAGGCCTCAGCAGGCAGGGACCCTTCCAGGC...TGCCAACATTGTAATGACAAAATAAATTCCCGTGAAGTTCCACAACCAGGCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTCCTAAGATCCTGACTTaGCTAAAGGAGGGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LANKIDPEAQRPYAKWFPPKILT*LKEGRG Trigger: CCCCCTCCCCTCCTTTAGCCAAGTCAGGATCTTAGG...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR TCA 90 bp | CCGGCCTGGTTGTGGAACTTCACGGGAATTTATTTTGTCATTACAATGTTGGCAAGAGAGGTGAGGCCCTaGGGTCAGTCAGACAGGACT | + |
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Preference number: 2 (lower is better) Translates to: PAWLWNFTGIYFVITMLAREVRP*GQSDRT Trigger: AGTCCTGTCTGACTGACCTCAGGGCCTCACCTCTCT...TGCCAACATTGTAATGACAAAATAAATTCCCGTGAAGTTCCACAACCAGGCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTCACCAGGTCCTGTGCTaGAGGGCATTTGCACATCTT | + |
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Preference number: 2 (lower is better) Translates to: LANKIDPEAQRPYAKWFPHQVLC*RAFAHL Trigger: AAGATGTGCAAATGCCCTTCAGCACAGGACCTGGTG...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTCTGGTCTTGAACTCCTaGCCTCAGATGATCCACCCA | + |
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Preference number: 2 (lower is better) Translates to: LANKIDPEAQRPYAKWFPLVLNS*PQMIHP Trigger: TGGGTGGATCATCTGAGGTCAGGAGTTCAAGACCAG...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGAGCCAAAGGATGGATTaGCAAAACAAAGATTACGAT | + |
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Preference number: 2 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVSQRMD*QNKDYD Trigger: ATCGTAATCTTTGTTTTGGCAATCCATCCTTTGGCT...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTTGCCCGGCCTGGTTGTaGAACTTCACGGGAATTTAT | + |
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Preference number: 2 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVCPAWL*NFTGIY Trigger: ATAAATTCCCGTGAAGTTCCACAACCAGGCCGGGCA...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTCCAGGTGTCACTGATTaGCTAGTCAAATTCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LANKIDPEAQRPYAKWFPPGVTD*LVKFLD Trigger: GTCCAGGAATTTGACTAGTCAATCAGTGACACCTGG...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTTCTCTCAGGAAAATGTaGGCCTTGGCGACATCCAAT | + |
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Preference number: 2 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVSLRKM*ALATSN Trigger: ATTGGATGTCGCCAAGGCCCACATTTTCCTGAGAGA...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTTCGTGTGCTGTAAACTaGGGTTCTGTCTTGGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LANKIDPEAQRPYAKWFPSCAVN*GSVLEF Trigger: AAACTCCAAGACAGAACCTCAGTTTACAGCACACGA...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR CCA 72 bp | CAGGGGACACCTACAGGCCAGGCCAGGCCAGGATCCTaGTGCTGCTTCAGCCTACTGTGGCCTGGAAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: QGTPTGQARPGS*CCFSLLWPGRV Trigger: GACCCTTCCAGGCCACAGTAGGCTGAAGCAGCACCAGGATCCTGGCCTGGCCTGGCCTGTAGGTGTCCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR GCA 72 bp | GATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTaGCGGGTGCACGTGCCTGAACGTGGCACCGTACCC | + |
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Preference number: 3 (lower is better) Translates to: DVMPQVGMCPEP*RVHVPERGTVP Trigger: GGGTACGGTGCCACGTTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR CCA 72 bp | GCCAGGATCCTGGTGCTGCTTCAGCCTACTGTGGCCTaGAAGGGTCCCTGCCTGCTGAGGCCTAAGATCCTG | + |
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Preference number: 3 (lower is better) Translates to: ARILVLLQPTVA*KGPCLLRPKIL Trigger: CAGGATCTTAGGCCTCAGCAGGCAGGGACCCTTCCAGGCCACAGTAGGCTGAAGCAGCACCAGGATCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR GCA 72 bp | GCCCAACGGCCTTATGCCAAATGGTTCCCTCCCCACTaGTGTCCATCCTGGGCTGCCACTCCCAAAACTGCC | + |
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Preference number: 3 (lower is better) Translates to: AQRPYAKWFPPH*CPSWAATPKTA Trigger: GGCAGTTTTGGGAGTGGCAGCCCAGGATGGACAGCAGTGGGGAGGGAACCATTTGGCATAAGGCCGTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR CCA 72 bp | CGGGTGCACGTGCCTGAACGTGGCACCGTACCCAGCTaGGTAAAAACGGCTCGAGCACGGAAGCCAAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: RVHVPERGTVPS*VKTARARKPKD Trigger: ATCCTTTGGCTTCCGTGCTCGAGCCGTTTTTACCCAGCTGGGTACGGTGCCACGTTCAGGCACGTGCACCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR GCA 72 bp | TGCCACCTGACAGATGTCATGCCCCAGGTAGGTATGTaGCCTGAACCTTGCCGGGTGCACGTGCCTGAACGT | + |
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Preference number: 3 (lower is better) Translates to: CHLTDVMPQVGM*PEPCRVHVPER Trigger: ACGTTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGTCAGGTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR GCA 72 bp | GTGCTGCTTCAGCCTACTGTGGCCTGGAAGGGTCCCTaGCTGCTGAGGCCTAAGATCCTGACTTGGCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: VLLQPTVAWKGP*LLRPKILTWLK Trigger: CTTTAGCCAAGTCAGGATCTTAGGCCTCAGCAGGCAGGGACCCTTCCAGGCCACAGTAGGCTGAAGCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGAACCTTGCCGGGTGCACGTGCCTGAACGTGGCACCGTACCCAGCTGGGAAGCCAAAGGATGGATaGCCAAAACAAAGATTACGA | + |
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Preference number: 3 (lower is better) Translates to: ALNLAGCTCLNVAPYPAGKPKDG*PKQRLR Trigger: TCGTAATCTTTGTTTTGGCAATCCATCCTTTGGCTT...CCCAGCTGGGTACGGTGCCACGTTCAGGCACGTGCACCCGGCAAGGTTCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR TCA 72 bp | GCTGCCACTCCCAAAACTGCCAGTACCAGGTGTCACTaGTTGACTAGTCAAATTCCTGGACAAAGGGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: AATPKTASTRCH*LTSQIPGQRGY Trigger: GTAGCCCCTTTGTCCAGGAATTTGACTAGTCAATCAGTGACACCTGGTACTGGCAGTTTTGGGAGTGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR TCA 72 bp | CCACTCCCAAAACTGCCAGTACCAGGTGTCACTGATTaGCTAGTCAAATTCCTGGACAAAGGGGCTACACAC | + |
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Preference number: 3 (lower is better) Translates to: PLPKLPVPGVTD*LVKFLDKGATH Trigger: GTGTGTAGCCCCTTTGTCCAGGAATTTGACTAGTCAATCAGTGACACCTGGTACTGGCAGTTTTGGGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR-3UTR CAA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTAGGAAAATGTGGGCCTaGGCGACATCCAATGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVRKMWA*ATSNAS Trigger: ACTAGCATTGGATGTCGCCAAGGCCCACATTTTCCT...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| 3UTR TCA 72 bp | GTCTTGGAGTTTATGTCATGTCACCAGGTCCTGTGCTaGAGGGCATTTGCACATCTTTTGTGGCTTCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: VLEFMSCHQVLC*RAFAHLLWLLS Trigger: TGAGAGAAGCCACAAAAGATGTGCAAATGCCCTTCAGCACAGGACCTGGTGACATGACATAAACTCCAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR TCA 90 bp | GCCCTGAACCTTGCCGGGTGCACGTGCCTGAACGTGGCACCGTACCCAGCTGGGGGTAGGTATGTGCCCTaGACCTTGCCGGGTGCACGT | + |
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Preference number: 4 (lower is better) Translates to: ALNLAGCTCLNVAPYPAGGRYVP*TLPGAR Trigger: ACGTGCACCCGGCAAGGTTCAGGGCACATACCTACC...CCCAGCTGGGTACGGTGCCACGTTCAGGCACGTGCACCCGGCAAGGTTCAGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | GCCCTGAACCTTGCCGGGTGCACGTGCCTGAACGTGGCACCGTACCCAGCTGGGGCGTTCTCAGCTCACTaGCACCTCTGCCTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ALNLAGCTCLNVAPYPAGAFSAH*HLCLPG Trigger: CCCAGGAAGGCAGAGGTGGCAGTGAGCTGAGAACGC...CCCAGCTGGGTACGGTGCCACGTTCAGGCACGTGCACCCGGCAAGGTTCAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAACAGCCTACTGTGGCCTaGAAGGGTCCCTGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VMPQVGMCPEPCRVHVPEQPTVA*KGPCLL Trigger: CAGCAGGCAGGGACCCTTCCAGGCCACAGTAGGCTG...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | CCATCCCCGCATCCTGCTCGGTGCCACCTGACAGATGTCATGCCCCAGGTAGGTGCCAGGCCAGGATCCTaGTGCTGCTTCAGCCTACTG | + |
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Preference number: 4 (lower is better) Translates to: PSPHPARCHLTDVMPQVGARPGS*CCFSLL Trigger: CAGTAGGCTGAAGCAGCACCAGGATCCTGGCCTGGC...ACCTACCTGGGGCATGACATCTGTCAGGTGGCACCGAGCAGGATGCGGGGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAACTGAACCTTGCCGGGTaGACGTGCCTGAACGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: VMPQVGMCPEPCRVHVPELNLAG*TCLNVA Trigger: TGCCACGTTCAGGCACGTGCACCCGGCAAGGTTCAG...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAACCCCAGGTAGGTATGTaGCCTGAACCTTGCCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VMPQVGMCPEPCRVHVPEPQVGM*PEPCRV Trigger: CACCCGGCAAGGTTCAGGGCACATACCTACCTGGGG...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CCATCCCCGCATCCTGCTCGGTGCCACCTGACAGATGTCATGCCCCAGGTAGGTCCAGGATCCTGGTGCTaGTTCAGCCTACTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSPHPARCHLTDVMPQVGPGSWC*FSLLWP Trigger: AGGCCACAGTAGGCTGAAGCAGCACCAGGATCCTGG...ACCTACCTGGGGCATGACATCTGTCAGGTGGCACCGAGCAGGATGCGGGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAAGGCACCGTACCCAGCTaGGTAAAAACGGCTCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VMPQVGMCPEPCRVHVPEGTVPS*VKTARA Trigger: TGCTCGAGCCGTTTTTACCCAGCTGGGTACGGTGCC...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAAAGCCCAACGGCCTTATaGCAAATGGTTCCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VMPQVGMCPEPCRVHVPESPTAL*QMVPSP Trigger: TGGGGAGGGAACCATTTGGCATAAGGCCGTTGGGCT...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAACGGCCTTATGCCAAATaGTTCCCTCCCCACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VMPQVGMCPEPCRVHVPERPYAK*FPPHCC Trigger: ACAGCAGTGGGGAGGGAACCATTTGGCATAAGGCCG...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR TCA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAACTGGTCTTGAACTCCTaGCCTCAGATGATCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VMPQVGMCPEPCRVHVPELVLNS*PQMIHP Trigger: TGGGTGGATCATCTGAGGTCAGGAGTTCAAGACCAG...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTAAGATCCTGACTTaGCTAAAGGAGGGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVPKILT*LKEGRG Trigger: CCCCCTCCCCTCCTTTAGCCAAGTCAGGATCTTAGG...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCACCTCTGCCTTCCTaGGATCAAGCGATTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVPPLPS*DQAILL Trigger: CAGGAGAATCGCTTGATCCCAGGAAGGCAGAGGTGG...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | GCCCTGAACCTTGCCGGGTGCACGTGCCTGAACGTGGCACCGTACCCAGCTGGGCTACACACTCCAGGCTaGTTGTGGAACTTTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALNLAGCTCLNVAPYPAGLHTPG*LWNFCF Trigger: AAAACAAAAGTTCCACAACCAGCCTGGAGTGTGTAG...CCCAGCTGGGTACGGTGCCACGTTCAGGCACGTGCACCCGGCAAGGTTCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGAGCCTCCCAAGTAGCTaGGACTCCAGGGAGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVSLPSS*DSRERL Trigger: CAATCTCTCCCTGGAGTCCCAGCTACTTGGGAGGCT...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR TCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTCCGGGTGCACGTGCCTaGACGTGGCACCGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LANKIDPEAQRPYAKWFPPGARA*TWHRTQ Trigger: CTGGGTACGGTGCCACGTTCAGGCACGTGCACCCGG...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR TCA 90 bp | CCATCCCCGCATCCTGCTCGGTGCCACCTGACAGATGTCATGCCCCAGGTAGGTCCAGGTGTCACTGATTaGCTAGTCAAATTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPARCHLTDVMPQVGPGVTD*LVKFLD Trigger: GTCCAGGAATTTGACTAGTCAATCAGTGACACCTGG...ACCTACCTGGGGCATGACATCTGTCAGGTGGCACCGAGCAGGATGCGGGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGACTCCAGGGAGAGATTaGTGTTTGCACGGCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVTPGRD*CLHGHR Trigger: CCTATGGCCGTGCAAACACCAATCTCTCCCTGGAGT...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAATCTCTCAGGAAAATGTaGGCCTTGGCGACATCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VMPQVGMCPEPCRVHVPESLRKM*ALATSN Trigger: ATTGGATGTCGCCAAGGCCCACATTTTCCTGAGAGA...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGTGCCCGGCCTGGTTGTaGAACTTCACGGGAATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVCPAWL*NFTGIY Trigger: ATAAATTCCCGTGAAGTTCCACAACCAGGCCGGGCA...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTCTTGCCGGGTGCACGTaGCTGAACGTGGCACCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVLAGCT*LNVAPY Trigger: GTACGGTGCCACGTTCAGGCACGTGCACCCGGCAAG...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CCATCCCCGCATCCTGCTCGGTGCCACCTGACAGATGTCATGCCCCAGGTAGGTAATTATGGACATGCTTaGCTATGTGGAAGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPARCHLTDVMPQVGNYGHA*LCGRRG Trigger: ACCTCTCCTTCCACATAGGCAAGCATGTCCATAATT...ACCTACCTGGGGCATGACATCTGTCAGGTGGCACCGAGCAGGATGCGGGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTGCCTGGAAGGGTCCCTaGCTGCTGAGGCCTAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVAWKGP*LLRPKI Trigger: GATCTTAGGCCTCAGCAGGCAGGGACCCTTCCAGGC...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGGTGCTGAAGGGCATTTaGACATCTTTTGTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVVLKGI*TSFVAS Trigger: AGAAGCCACAAAAGATGTGCAAATGCCCTTCAGCAC...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTTGCTTCAGCCTACTGTaGCCTGGAAGGGTCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LANKIDPEAQRPYAKWFPCFSLL*PGRVPA Trigger: GGCAGGGACCCTTCCAGGCCACAGTAGGCTGAAGCA...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR TCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTAGAGAGGTGAGGCCCTaGGGTCAGTCAGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LANKIDPEAQRPYAKWFPREVRP*GQSDRT Trigger: AGTCCTGTCTGACTGACCTCAGGGCCTCACCTCTCT...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CCATCCCCGCATCCTGCTCGGTGCCACCTGACAGATGTCATGCCCCAGGTAGGTAGCCAAAGGATGGATTaGCAAAACAAAGATTACGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPHPARCHLTDVMPQVGSQRMD*QNKDYD Trigger: ATCGTAATCTTTGTTTTGGCAATCCATCCTTTGGCT...ACCTACCTGGGGCATGACATCTGTCAGGTGGCACCGAGCAGGATGCGGGGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTATGTGCCCTGAACCTTaGCGGGTGCACGTGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LANKIDPEAQRPYAKWFPMCPEP*RVHVPE Trigger: TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACAT...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
||
| CDS-3UTR CCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTGCTCGTCACCCAGGCTaGAGTGCAGTTGTGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVARHPG*SAVVRS Trigger: AGAACGCACAACTGCACTCCAGCCTGGGTGACGAGC...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CCGGCCTGGTTGTGGAACTTCACGGGAATTTATTTTGTCATTACAATGTTGGCATCCATCCCCGCATCCTaGTCGGTGCCACCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PAWLWNFTGIYFVITMLASIPAS*SVPPDR Trigger: TCTGTCAGGTGGCACCGAGCAGGATGCGGGGATGGA...TGCCAACATTGTAATGACAAAATAAATTCCCGTGAAGTTCCACAACCAGGCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTGCTGGAGTGCAGTTGTaGGTTCTCAGCTCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVAGVQL*VLSSLP Trigger: TGGCAGTGAGCTGAGAACGCACAACTGCACTCCAGC...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTTGGGAGCAATCCTTCTaGCTCAGCCTCCCAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVWEQSF*LSLPSS Trigger: GCTACTTGGGAGGCTGAGGCAGAAGGATTGCTCCCA...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | CCGGCCTGGTTGTGGAACTTCACGGGAATTTATTTTGTCATTACAATGTTGGCACCACCATGCCCGGCCTaGTTGTGGAACTTCACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PAWLWNFTGIYFVITMLAPPCPA*LWNFTG Trigger: TCCCGTGAAGTTCCACAACCAGGCCGGGCATGGTGG...TGCCAACATTGTAATGACAAAATAAATTCCCGTGAAGTTCCACAACCAGGCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR TCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTCACCAGGTCCTGTGCTaGAGGGCATTTGCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVHQVLC*RAFAHL Trigger: AAGATGTGCAAATGCCCTTCAGCACAGGACCTGGTG...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CCGGCCTGGTTGTGGAACTTCACGGGAATTTATTTTGTCATTACAATGTTGGCAGCTCACTGCCACCTCTaGCTTCCTGGGATCAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PAWLWNFTGIYFVITMLAAHCHL*LPGIKR Trigger: TCGCTTGATCCCAGGAAGGCAGAGGTGGCAGTGAGC...TGCCAACATTGTAATGACAAAATAAATTCCCGTGAAGTTCCACAACCAGGCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTTGCCACTCCCAAAACTaGCAGTACCAGGTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LANKIDPEAQRPYAKWFPCHSQN*QYQVSL Trigger: CAGTGACACCTGGTACTGGCAGTTTTGGGAGTGGCA...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTCTAAGTTTTCCAGGCTaGACTAGAACTCGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVLSFPG*TRTRGS Trigger: GCTCCCACGAGTTCTAGTGCAGCCTGGAAAACTTAG...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGTTTTTGTTATTTCCTTaGGGTCTTGCTAAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVFLLFP*GLAKFS Trigger: GGAAAACTTAGCAAGACCCCAAGGAAATAACAAAAA...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR TCA 90 bp | CAAATTCCTGGACAAAGGGGCTACACACTCCAGGCTGGTTGTGGAACTTTTGTTTCGTGTGCTGTAAACTaGGGTTCTGTCTTGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QIPGQRGYTLQAGCGTFVSCAVN*GSVLEF Trigger: AAACTCCAAGACAGAACCTCAGTTTACAGCACACGA...AACAAAAGTTCCACAACCAGCCTGGAGTGTGTAGCCCCTTTGTCCAGGAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR GCA 90 bp | CCGGCCTGGTTGTGGAACTTCACGGGAATTTATTTTGTCATTACAATGTTGGCATTTGAGATGGAGTTTTaGTCGTCACCCAGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAWLWNFTGIYFVITMLAFEMEF*SSPRLE Trigger: CTCCAGCCTGGGTGACGAGCAAAACTCCATCTCAAA...TGCCAACATTGTAATGACAAAATAAATTCCCGTGAAGTTCCACAACCAGGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR TCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTAGTACCAGGTGTCACTaGTTGACTAGTCAAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LANKIDPEAQRPYAKWFPSTRCH*LTSQIP Trigger: AGGAATTTGACTAGTCAATCAGTGACACCTGGTACT...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CCA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTACTCCAGGCTGGTTGTaGAACTTTTGTTTTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LANKIDPEAQRPYAKWFPTPGWL*NFCFEM Trigger: CATCTCAAAACAAAAGTTCCACAACCAGCCTGGAGT...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS TCA 90 bp | GATGCCACGAGGGAGCCGGAACCTATGACGCCGCCGCGGGGATGCTaGGCTTCGGCGGGCGGCTGGACGTTCCTAAGCAGAGCTCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DATREPEPMTPPRGC*ASAGGWTFLSRARS Trigger: GCTGCGAGCTCTGCTTAGGAACGTCCAGCCGCCCGCCGAAGCTCAGCATCCCCGCGGCGGCGTCATAGGTTCCGGCTCCCTCGTGGCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496335.1 |
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| CDS TCA 90 bp | TCGGCGGGCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGGCTTaGCGGCCCGCGAGCGCTTCCAGAACCTTTCCTTTCCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAGGWTFLSRARSVA*RPASASRTFPFLFL Trigger: AAGGAAGAGGAAAGGAAAGGTTCTGGAAGCGCTCGCGGGCCGTCAAGCCACGCTGCGAGCTCTGCTTAGGAACGTCCAGCCGCCCGCCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496335.1 |
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| CDS-3UTR CAA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGAGGAAAATGTGGGCCTaGGCGACATCCAATGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVRKMWA*ATSNAS Trigger: ACTAGCATTGGATGTCGCCAAGGCCCACATTTTCCT...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGTGCTTGCCAACAAAATaGATCCTGAAGCCCAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVCLPTK*ILKPNG Trigger: GCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAGCA...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CAA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAATATTTCCTTGGGGTCTaGCTAAGTTTTCCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VMPQVGMCPEPCRVHVPEYFLGV*LSFPGC Trigger: GCAGCCTGGAAAACTTAGCAAGACCCCAAGGAAATA...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350498.8 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCGCATCCTGCTCGGTGCCACCTGACAGATGTCATGCCCCAGGTAGGTGCATTTGCACATCTTTaGTGGCTTCTCTCAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSPHPARCHLTDVMPQVGAFAHL*WLLSGK Trigger: TTTTCCTGAGAGAAGCCACAAAAGATGTGCAAATGC...ACCTACCTGGGGCATGACATCTGTCAGGTGGCACCGAGCAGGATGCGGGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
||
| CDS-3UTR CAA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCACACTCCAGGCTGGTaGTGGAACTTTTGTTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVHTPGW*WNFCFE Trigger: CTCAAAACAAAAGTTCCACAACCAGCCTGGAGTGTG...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000350498.8 |
||
| CDS TCA 90 bp | TTCTTGCTCACATTTTATGTCCAGTGTGGGTGTTGTGAGGTGCTCTaGTGGAAGCTGTCCCCAGCATGCTGTCCCAGATGCCACGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLTFYVQCGCCEVL*WKLSPACCPRCHEG Trigger: TCCCTCGTGGCATCTGGGACAGCATGCTGGGGACAGCTTCCATCAGAGCACCTCACAACACCCACACTGGACATAAAATGTGAGCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496335.1 |
||
| CDS-3UTR CAA 90 bp | GTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGCCTGAAGGAAGGAGAGGTTTTTaGTTATTTCCTTGGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VMPQVGMCPEPCRVHVPEGRRGF*LFPWGL Trigger: AAGACCCCAAGGAAATAACAAAAAACCTCTCCTTCC...TTCAGGCACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000350498.8 |
||
| CDS GCA 90 bp | TTTACTTCTTGCTCACATTTTATGTCCAGTGTGGGTGTTGTGAGGTaGTCTGATGGAAGCTGTCCCCAGCATGCTGTCCCAGATGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: FTSCSHFMSSVGVVR*SDGSCPQHAVPDAT Trigger: CGTGGCATCTGGGACAGCATGCTGGGGACAGCTTCCATCAGAGCACCTCACAACACCCACACTGGACATAAAATGTGAGCAAGAAGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496335.1 |
||
| CDS-3UTR CAA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGAAGCCAAAGGATGGATaGCCAAAACAAAGATTACGA | + |
|
Preference number: 5 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVKPKDG*PKQRLR Trigger: TCGTAATCTTTGTTTTGGCAATCCATCCTTTGGCTT...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
||
| CDS-3UTR CAA 90 bp | CCGGCCTGGTTGTGGAACTTCACGGGAATTTATTTTGTCATTACAATGTTGGCACCATGCCCGGCCTGGTaGTGGAACTTCACGGGAATT | + |
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Preference number: 5 (lower is better) Translates to: PAWLWNFTGIYFVITMLAPCPAW*WNFTGI Trigger: AATTCCCGTGAAGTTCCACAACCAGGCCGGGCATGG...TGCCAACATTGTAATGACAAAATAAATTCCCGTGAAGTTCCACAACCAGGCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CAA 90 bp | ACAGATGTCATGCCCCAGGTAGGTATGTGCCCTGAACCTTGCCGGGTGCACGTGGCTTATTTTTACTGCTaGCCAACAAAATTGATCCTG | + |
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Preference number: 5 (lower is better) Translates to: TDVMPQVGMCPEPCRVHVAYFYC*PTKLIL Trigger: CAGGATCAATTTTGTTGGCAAGCAGTAAAAATAAGC...CACGTGCACCCGGCAAGGTTCAGGGCACATACCTACCTGGGGCATGACATCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS-3UTR CAA 90 bp | CTTGCCAACAAAATTGATCCTGAAGCCCAACGGCCTTATGCCAAATGGTTCCCTTGTGCTGAAGGGCATTaGCACATCTTTTGTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LANKIDPEAQRPYAKWFPCAEGH*HIFCGF Trigger: GAAGCCACAAAAGATGTGCAAATGCCCTTCAGCACA...AGGGAACCATTTGGCATAAGGCCGTTGGGCTTCAGGATCAATTTTGTTGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000350498.8 |
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| CDS TCA 72 bp | AGGGAGCCGGAACCTATGACGCCGCCGCGGGGATGCTaGGCTTCGGCGGGCGGCTGGACGTTCCTAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: REPEPMTPPRGC*ASAGGWTFLSR Trigger: TCTGCTTAGGAACGTCCAGCCGCCCGCCGAAGCTCAGCATCCCCGCGGCGGCGTCATAGGTTCCGGCTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496335.1 |
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| CDS CAA 90 bp | TTCGGCGGGCGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGGCTaGACGGCCCGCGAGCGCTTCCAGAACCTTTCCTTTCCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FGGRLDVPKQSSQRG*TARERFQNLSFPLP Trigger: AGGAAGAGGAAAGGAAAGGTTCTGGAAGCGCTCGCGGGCCGTCAAGCCACGCTGCGAGCTCTGCTTAGGAACGTCCAGCCGCCCGCCGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496335.1 |
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| CDS TCA 72 bp | GGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGGCTTaGCGGCCCGCGAGCGCTTCCAGAACCTTTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GWTFLSRARSVA*RPASASRTFPF Trigger: GAAAGGAAAGGTTCTGGAAGCGCTCGCGGGCCGTCAAGCCACGCTGCGAGCTCTGCTTAGGAACGTCCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496335.1 |
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| CDS CAA 72 bp | CGGCTGGACGTTCCTAAGCAGAGCTCGCAGCGTGGCTaGACGGCCCGCGAGCGCTTCCAGAACCTTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: RLDVPKQSSQRG*TARERFQNLSF Trigger: AAAGGAAAGGTTCTGGAAGCGCTCGCGGGCCGTCAAGCCACGCTGCGAGCTCTGCTTAGGAACGTCCAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496335.1 |
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| CDS TCA 72 bp | ACATTTTATGTCCAGTGTGGGTGTTGTGAGGTGCTCTaGTGGAAGCTGTCCCCAGCATGCTGTCCCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: TFYVQCGCCEVL*WKLSPACCPRC Trigger: GCATCTGGGACAGCATGCTGGGGACAGCTTCCATCAGAGCACCTCACAACACCCACACTGGACATAAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496335.1 |
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| CDS GCA 72 bp | TGCTCACATTTTATGTCCAGTGTGGGTGTTGTGAGGTaGTCTGATGGAAGCTGTCCCCAGCATGCTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: CSHFMSSVGVVR*SDGSCPQHAVP Trigger: TGGGACAGCATGCTGGGGACAGCTTCCATCAGAGCACCTCACAACACCCACACTGGACATAAAATGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496335.1 |
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| CDS TCA 72 bp | CTTCTTGCTCACATTTTATGTCCAGTGTGGGTGTTGTaGGGTGCTCTGATGGAAGCTGTCCCCAGCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLAHILCPVWVL*GALMEAVPSML Trigger: CAGCATGCTGGGGACAGCTTCCATCAGAGCACCTCACAACACCCACACTGGACATAAAATGTGAGCAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496335.1 |
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