RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCYT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185813

Ensembl transcript IDs: ENST00000331285.7, ENST00000538721.6, ENST00000538936.7, ENST00000570388.5, ENST00000570391.5, ENST00000571105.5, ENST00000571581.5, ENST00000571944.1, ENST00000572157.1, ENST00000572473.1, ENST00000572924.2, ENST00000572995.5, ENST00000573401.6, ENST00000573636.6, ENST00000573927.5, ENST00000574343.5, ENST00000576343.5

Found 796 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTTTGGGATGCGGAGGTGCGACGGCTCCTCCGCGCGCGCCCGCTaGACCCCAGCCCGCCCGCCGCCCCTCCCGGCCCTCCGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: SFGMRRCDGSSARAR*TPARPPPLPALRSL
Trigger: GAGGCTGCGGAGGGCCGGGAGGGGCGGCGGGCGGGCTGGGGTGCAGCGGGCGCGCGCGGAGGAGCCGTCGCACCTCCGCATCCCAAAGGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp TGGCCCGGTCCGCGACACTGGCGGCCGCCGCCCTGGCGCTGTGCCTaGTGCTGGCGCCGCCTGGCCTCGCGTGGTACAAGCCAGCGGCGG +
Preference number: 1 (lower is better)
Translates to: WPGPRHWRPPPWRCA*CWRRLASRGTSQRR
Trigger: CCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCAGCAGCAGGCACAGCGCCAGGGCGGCGGCCGCCAGTGTCGCGGACCGGGCCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp TGGGGGACGACTCCTAGGGCTGGGCGCCCGTGGGCCCTCCCCTGCTaGCACTGCGGCCCACGCAAGCCGGGCCTGAAGGGCGCGAGCGGC +
Preference number: 1 (lower is better)
Translates to: WGTTPRAGRPWALPC*HCGPRKPGLKGASG
Trigger: GCCGCTCGCGCCCTTCAGGCCCGGCTTGCGTGGGCCGCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCTAGGAGTCGTCCCCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp GCCTGGGGGACGACTCCTAGGGCTGGGCGCCCGTGGGCCCTCCCCTaGTGCCACTGCGGCCCACGCAAGCCGGGCCTGAAGGGCGCGAGC +
Preference number: 1 (lower is better)
Translates to: AWGTTPRAGRPWALP*CHCGPRKPGLKGAS
Trigger: GCTCGCGCCCTTCAGGCCCGGCTTGCGTGGGCCGCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCTAGGAGTCGTCCCCCAGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp GGTCCGCGACACTGGCGGCCGCCGCCCTGGCGCTGTGCCTGCTGCTaGCGCCGCCTGGCCTCGCGTGGTACAAGCCAGCGGCGGGGCACA +
Preference number: 1 (lower is better)
Translates to: GPRHWRPPPWRCACC*RRLASRGTSQRRGT
Trigger: TGTGCCCCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCAGCAGCAGGCACAGCGCCAGGGCGGCGGCCGCCAGTGTCGCGGACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp CAGCCTCGGCCCGCCCTCGCCGCAGATATAAGGCGGCCCAGGCGGTaGCTGCTCCGAGCCCGGACGCCGCCGCCCACCAGTCAGCCGGCG +
Preference number: 1 (lower is better)
Translates to: QPRPALAADIRRPRR*LLRARTPPPTSQPA
Trigger: CGCCGGCTGACTGGTGGGCGGCGGCGTCCGGGCTCGGAGCAGCCACCGCCTGGGCCGCCTTATATCTGCGGCGAGGGCGGGCCGAGGCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp CTTGCGCGCCTCCAGCGCTCGCCCGCGCGGCTGGTTCCTTTGGGATaGGGAGGTGCGACGGCTCCTCCGCGCGCGCCCGCTGCACCCCAG +
Preference number: 1 (lower is better)
Translates to: LARLQRSPARLVPLG*GGATAPPRAPAAPQ
Trigger: CTGGGGTGCAGCGGGCGCGCGCGGAGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCGCGGGCGAGCGCTGGAGGCGCGCAAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp ACGACTCCTAGGGCTGGGCGCCCGTGGGCCCTCCCCTGCTGCCACTaGGGCCCACGCAAGCCGGGCCTGAAGGGCGCGAGCGGCATGGGT +
Preference number: 1 (lower is better)
Translates to: TTPRAGRPWALPCCH*GPRKPGLKGASGMG
Trigger: ACCCATGCCGCTCGCGCCCTTCAGGCCCGGCTTGCGTGGGCCGCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCTAGGAGTCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp AGATCCTTGCGCGCCTCCAGCGCTCGCCCGCGCGGCTGGTTCCTTTaGGATGCGGAGGTGCGACGGCTCCTCCGCGCGCGCCCGCTGCAC +
Preference number: 1 (lower is better)
Translates to: RSLRASSARPRGWFL*DAEVRRLLRARPLH
Trigger: GTGCAGCGGGCGCGCGCGGAGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCGCGGGCGAGCGCTGGAGGCGCGCAAGGATCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp CCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTCGCCCGCGCGGCTaGTTCCTTTGGGATGCGGAGGTGCGACGGCTCCTCCGCGCGCGC +
Preference number: 1 (lower is better)
Translates to: PSARSLRASSARPRG*FLWDAEVRRLLRAR
Trigger: GCGCGCGCGGAGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCGCGGGCGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp ACGACCCAGCCCCGCGGTGAAGCCGCGCCTAGCCTTGGTGCTCCCTaGGGGAAGTGCAGGGCCACGGCTGGCCCGGTTCCCAGTGTCCTC +
Preference number: 1 (lower is better)
Translates to: TTQPRGEAAPSLGAP*GKCRATAGPVPSVL
Trigger: GAGGACACTGGGAACCGGGCCAGCCGTGGCCCTGCACTTCCCCCAGGGAGCACCAAGGCTAGGCGCGGCTTCACCGCGGGGCTGGGTCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp GGTTGGCCTGGGCCGCCCAGAGGTCTTCAGACCCAGGGGCGAAGCTaGCCACGACCCAGCCCCGCGGTGAAGCCGCGCCTAGCCTTGGTG +
Preference number: 1 (lower is better)
Translates to: GWPGPPRGLQTQGRS*PRPSPAVKPRLALV
Trigger: CACCAAGGCTAGGCGCGGCTTCACCGCGGGGCTGGGTCGTGGCCAGCTTCGCCCCTGGGTCTGAAGACCTCTGGGCGGCCCAGGCCAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp CCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTaGAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGC +
Preference number: 1 (lower is better)
Translates to: PGTRWGRTQERCVSG*RCRLPVSLPASPLC
Trigger: GCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR GCA 90 bp GGGGAGCTTGAGGGGGCGTTGGGCTCCCACCAAGCGCCAGATCCTTaGGCGCCTCCAGCGCTCGCCCGCGCGGCTGGTTCCTTTGGGATG +
Preference number: 1 (lower is better)
Translates to: GELEGALGSHQAPDP*APPALARAAGSFGM
Trigger: CATCCCAAAGGAACCAGCCGCGCGGGCGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAGCCCAACGCCCCCTCAAGCTCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp GCCGTTGGGTGTGACTCCGGAACTGGCTTGGGCTCTGGCCTCCAATaGTGCTACGGGGCCAGGCCCACCTCCGGGCCCAGGCAGCAGCAC +
Preference number: 1 (lower is better)
Translates to: AVGCDSGTGLGSGLQ*CYGARPTSGPRQQH
Trigger: GTGCTGCTGCCTGGGCCCGGAGGTGGGCCTGGCCCCGTAGCAGCATTGGAGGCCAGAGCCCAAGCCAGTTCCGGAGTCACACCCAACGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp CGCCTGCTACAGGGGGTGGCCCCAGGCTTTGGAGGGCTGGAGGCCTaGGTTTCACTCACTGCCAGGCTGCCCGCTGCACTCCCGGCTGCT +
Preference number: 1 (lower is better)
Translates to: RLLQGVAPGFGGLEA*VSLTARLPAALPAA
Trigger: AGCAGCCGGGAGTGCAGCGGGCAGCCTGGCAGTGAGTGAAACCCAGGCCTCCAGCCCTCCAAAGCCTGGGGCCACCCCCTGTAGCAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp GGCCTGGGTTTCACTCACTGCCAGGCTGCCCGCTGCACTCCCGGCTaGTGGGTGCATGGTGGGGGCAGGGCCAAGAGGGTCTCCTTGCTG +
Preference number: 1 (lower is better)
Translates to: GLGFTHCQAARCTPG*WVHGGGRAKRVSLL
Trigger: CAGCAAGGAGACCCTCTTGGCCCTGCCCCCACCATGCACCCAGCAGCCGGGAGTGCAGCGGGCAGCCTGGCAGTGAGTGAAACCCAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp GTTGGGTGTGACTCCGGAACTGGCTTGGGCTCTGGCCTCCAATGCTaGTACGGGGCCAGGCCCACCTCCGGGCCCAGGCAGCAGCACTGC +
Preference number: 1 (lower is better)
Translates to: VGCDSGTGLGSGLQC*YGARPTSGPRQQHC
Trigger: GCAGTGCTGCTGCCTGGGCCCGGAGGTGGGCCTGGCCCCGTAGCAGCATTGGAGGCCAGAGCCCAAGCCAGTTCCGGAGTCACACCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp CTGGGTGCATGGTGGGGGCAGGGCCAAGAGGGTCTCCTTGCTGAGTaGTTCCCTGGTCCTTCCCAGCAGGGCTGGGAGCCCCGCGCAGCA +
Preference number: 1 (lower is better)
Translates to: LGAWWGQGQEGLLAE*FPGPSQQGWEPRAA
Trigger: TGCTGCGCGGGGCTCCCAGCCCTGCTGGGAAGGACCAGGGAACCACTCAGCAAGGAGACCCTCTTGGCCCTGCCCCCACCATGCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTaGCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTGGACA +
Preference number: 1 (lower is better)
Translates to: TRWGRTQERCVSGCR*RLPVSLPASPLCWT
Trigger: TGTCCAGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR GCA 90 bp GAGCAGGGTGACAGGCTGCCTTCCTGGGCTGTGGAGAGCCTCGCGTaGACCTCGCCTCCAGCTCCTGTGCTGGGTCGTGAGGTCGACCTC +
Preference number: 1 (lower is better)
Translates to: EQGDRLPSWAVESLA*TSPPAPVLGREVDL
Trigger: GAGGTCGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCACAGCCCAGGAAGGCAGCCTGTCACCCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 90 bp GGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTaGGGTCGACCTCACAACAGCAGAGGACAGGCCCATGGGGTGCCA +
Preference number: 1 (lower is better)
Translates to: GEPRVHLASSSCAGS*GRPHNSRGQAHGVP
Trigger: TGGCACCCCATGGGCCTGTCCTCTGCTGTTGTGAGGTCGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 90 bp CAGGCCACGAGGGGAACGGGACCTGGAAATCCCCAAGCCTGGGTATaGGAAGGCAGCCGAGTGTGCGGCGGCAGGGCAAGGTTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: QATRGTGPGNPQAWV*EGSRVCGGRARLAW
Trigger: CCAGGCCAACCTTGCCCTGCCGCCGCACACTCGGCTGCCTTCTCATACCCAGGCTTGGGGATTTCCAGGTCCCGTTCCCCTCGTGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp CCTGGGCTGTGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTaGTGGGTCGTGAGGTCGACCTCACAACAGCAGAGGACAGGCCCA +
Preference number: 1 (lower is better)
Translates to: PGLWRASRAPRLQLL*WVVRSTSQQQRTGP
Trigger: TGGGCCTGTCCTCTGCTGTTGTGAGGTCGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCACAGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp CTGGGTTTCACTCACTGCCAGGCTGCCCGCTGCACTCCCGGCTGCTaGGTGCATGGTGGGGGCAGGGCCAAGAGGGTCTCCTTGCTGAGT +
Preference number: 1 (lower is better)
Translates to: LGFTHCQAARCTPGC*VHGGGRAKRVSLLS
Trigger: ACTCAGCAAGGAGACCCTCTTGGCCCTGCCCCCACCATGCACCCAGCAGCCGGGAGTGCAGCGGGCAGCCTGGCAGTGAGTGAAACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp TCTAGCATCGCCTGCTACAGGGGGTGGCCCCAGGCTTTGGAGGGCTaGAGGCCTGGGTTTCACTCACTGCCAGGCTGCCCGCTGCACTCC +
Preference number: 1 (lower is better)
Translates to: SSIACYRGWPQALEG*RPGFHSLPGCPLHS
Trigger: GGAGTGCAGCGGGCAGCCTGGCAGTGAGTGAAACCCAGGCCTCCAGCCCTCCAAAGCCTGGGGCCACCCCCTGTAGCAGGCGATGCTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp GAGGAGAGTTGGGGGCCTGAGCCCTGGCTCCAGAGGCCCAGAGCATaGCTCCCCAGAGCTGAAGGTGGGAGATGGGTAGGTTCTCCCTCC +
Preference number: 1 (lower is better)
Translates to: EESWGPEPWLQRPRA*LPRAEGGRWVGSPS
Trigger: GGAGGGAGAACCTACCCATCTCCCACCTTCAGCTCTGGGGAGGCATGCTCTGGGCCTCTGGAGCCAGGGCTCAGGCCCCCAACTCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp GCAAGGAGCCTCAGCTCTGGCTCTCCTCCTTATTCTAGCATCGCCTaGTACAGGGGGTGGCCCCAGGCTTTGGAGGGCTGGAGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: ARSLSSGSPPYSSIA*YRGWPQALEGWRPG
Trigger: CCCAGGCCTCCAGCCCTCCAAAGCCTGGGGCCACCCCCTGTAGCAGGCGATGCTAGAATAAGGAGGAGAGCCAGAGCTGAGGCTCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp AGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTaGGGGGTGCCCAGTGGGAGGTGGTGTGGTCTACACCCAGAGAAC +
Preference number: 1 (lower is better)
Translates to: SVFSWSQALGGRTPC*GVPSGRWCGLHPEN
Trigger: GTTCTCTGGGTGTAGACCACACCACCTCCCACTGGGCACCCCCCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000538936.7
3UTR CCA 90 bp CTCCTTATTCTAGCATCGCCTGCTACAGGGGGTGGCCCCAGGCTTTaGAGGGCTGGAGGCCTGGGTTTCACTCACTGCCAGGCTGCCCGC +
Preference number: 1 (lower is better)
Translates to: LLILASPATGGGPRL*RAGGLGFTHCQAAR
Trigger: GCGGGCAGCCTGGCAGTGAGTGAAACCCAGGCCTCCAGCCCTCCAAAGCCTGGGGCCACCCCCTGTAGCAGGCGATGCTAGAATAAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp GGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTaGTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAG +
Preference number: 1 (lower is better)
Translates to: GCRCRLPVSLPASPL*WTPSLSSFAGKSGE
Trigger: CTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR CCA 90 bp TGCTGGGTCGTGAGGTCGACCTCACAACAGCAGAGGACAGGCCCATaGGGTGCCACATGGGCCAGGTGCTGTAGGGCAGAGGCCATTCTG +
Preference number: 1 (lower is better)
Translates to: CWVVRSTSQQQRTGP*GATWARCCRAEAIL
Trigger: CAGAATGGCCTCTGCCCTACAGCACCTGGCCCATGTGGCACCCCATGGGCCTGTCCTCTGCTGTTGTGAGGTCGACCTCACGACCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp AGGACATCTCCTGGCTGCTGTGATGGGCTTTGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGC +
Preference number: 1 (lower is better)
Translates to: RTSPGCCDGLWLPAA*GPRGLWWTPLACAC
Trigger: GCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGATGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CCA 90 bp TGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTaGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCT +
Preference number: 1 (lower is better)
Translates to: CRCRLPVSLPASPLC*TPSLSSFAGKSGEP
Trigger: AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR CCA 90 bp TTCCTCTGCCTGCTTGTATCCTGGCTGTGCTGGCAGCCGATTAGGTaGTGCCCACCTGGATTGAGGGTGGGTCTGCCTCTCCCAGCCCAC +
Preference number: 1 (lower is better)
Translates to: FLCLLVSWLCWQPIR*CPPGLRVGLPLPAH
Trigger: GTGGGCTGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTGCCAGCACAGCCAGGATACAAGCAGGCAGAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp GGTTCCCTGGTCCTTCCCAGCAGGGCTGGGAGCCCCGCGCAGCACTaGCACCAGGCTTTATTCGGTTGTACCAAAGAGATTTCCGTCAGC +
Preference number: 1 (lower is better)
Translates to: GSLVLPSRAGSPAQH*HQALFGCTKEISVS
Trigger: GCTGACGGAAATCTCTTTGGTACAACCGAATAAAGCCTGGTGGCAGTGCTGCGCGGGGCTCCCAGCCCTGCTGGGAAGGACCAGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp AGCTCTGGCTCTCCTCCTTATTCTAGCATCGCCTGCTACAGGGGGTaGCCCCAGGCTTTGGAGGGCTGGAGGCCTGGGTTTCACTCACTG +
Preference number: 1 (lower is better)
Translates to: SSGSPPYSSIACYRG*PQALEGWRPGFHSL
Trigger: CAGTGAGTGAAACCCAGGCCTCCAGCCCTCCAAAGCCTGGGGCCACCCCCTGTAGCAGGCGATGCTAGAATAAGGAGGAGAGCCAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 90 bp GATGGGCTTTGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTGGTaGACACCCCTTGCGTGCGCTTGCATTCTCTGTACCTCCCAGCCT +
Preference number: 1 (lower is better)
Translates to: DGLWLPAACGPRGLW*TPLACACILCTSQP
Trigger: AGGCTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR GCA 90 bp CTCATCGGTGTGCACGCCTACGATGAGGTAGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGAGTGGCCGTAATGCACCATGTCATA +
Preference number: 1 (lower is better)
Translates to: LIGVHAYDEVVTHGP*LAQLVGVAVMHHVI
Trigger: TATGACATGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACCTCATCGTAGGCGTGCACACCGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CCA 90 bp TGTGATGGGCTTTGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTaGTGGACACCCCTTGCGTGCGCTTGCATTCTCTGTACCTCCCAG +
Preference number: 1 (lower is better)
Translates to: CDGLWLPAACGPRGL*WTPLACACILCTSQ
Trigger: CTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR TCA 90 bp CCCTACTCCGCTCACCCCGCAGTTAATGGCAAACGAATAAATAAATaGGGCGGCCTCGGAGTGAGGGGTGCTGGAGGACTGGCAGCCAGG +
Preference number: 1 (lower is better)
Translates to: PYSAHPAVNGKRINK*GGLGVRGAGGLAAR
Trigger: CCTGGCTGCCAGTCCTCCAGCACCCCTCACTCCGAGGCCGCCTCATTTATTTATTCGTTTGCCATTAACTGCGGGGTGAGCGGAGTAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 90 bp TATCCTGGCTGTGCTGGCAGCCGATTAGGTGGTGCCCACCTGGATTaGGGGTGGGTCTGCCTCTCCCAGCCCACTGACTCAAATGGGAAT +
Preference number: 1 (lower is better)
Translates to: YPGCAGSRLGGAHLD*GWVCLSQPTDSNGN
Trigger: ATTCCCATTTGAGTCAGTGGGCTGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTGCCAGCACAGCCAGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 90 bp TCGTCCACCCATTTGATGGCCTGCACCATCTTGTATCTCTCCTCCTaGGTGAACACCGGGGGCCCCTTGTGCTTGGCGATCTCCTCATCG +
Preference number: 1 (lower is better)
Translates to: SSTHLMACTILYLSS*VNTGGPLCLAISSS
Trigger: CGATGAGGAGATCGCCAAGCACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAAGATGGTGCAGGCCATCAAATGGGTGGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CCA 90 bp TTCAGCCAGTCTAGTCTTTCCACGTTCCTCTGCCTGCTTGTATCCTaGCTGTGCTGGCAGCCGATTAGGTGGTGCCCACCTGGATTGAGG +
Preference number: 1 (lower is better)
Translates to: FSQSSLSTFLCLLVS*LCWQPIRWCPPGLR
Trigger: CCTCAATCCAGGTGGGCACCACCTAATCGGCTGCCAGCACAGCCAGGATACAAGCAGGCAGAGGAACGTGGAAAGACTAGACTGGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 90 bp GGGAAGATACCCAAGAGAAGACATGACCAGGACCTTGGGGGAGCATaGAATGGTGAGGGCACAGTGAGCTTGAAGGCTGATGTCACCTGC +
Preference number: 1 (lower is better)
Translates to: GKIPKRRHDQDLGGA*NGEGTVSLKADVTC
Trigger: GCAGGTGACATCAGCCTTCAAGCTCACTGTGCCCTCACCATTTCATGCTCCCCCAAGGTCCTGGTCATGTCTTCTCTTGGGTATCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 90 bp GACACACCCAGTGACAATACTTTGCATCCTTCAATCCAGTCAAGCTaGCACTCAGCATTCACCATCACACCTGGGAAGCATGGAACCCAG +
Preference number: 1 (lower is better)
Translates to: DTPSDNTLHPSIQSS*HSAFTITPGKHGTQ
Trigger: CTGGGTTCCATGCTTCCCAGGTGTGATGGTGAATGCTGAGTGTCAGCTTGACTGGATTGAAGGATGCAAAGTATTGTCACTGGGTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 90 bp TCAAATGGGAATCTCCTCTGGCAACACCCTCACAGACACACCCAGTaGCAATACTTTGCATCCTTCAATCCAGTCAAGCTGACACTCAGC +
Preference number: 1 (lower is better)
Translates to: SNGNLLWQHPHRHTQ*QYFASFNPVKLTLS
Trigger: GCTGAGTGTCAGCTTGACTGGATTGAAGGATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTCCCATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 90 bp TCTCCTCTGGCAACACCCTCACAGACACACCCAGTGACAATACTTTaGATCCTTCAATCCAGTCAAGCTGACACTCAGCATTCACCATCA +
Preference number: 1 (lower is better)
Translates to: SPLATPSQTHPVTIL*ILQSSQADTQHSPS
Trigger: TGATGGTGAATGCTGAGTGTCAGCTTGACTGGATTGAAGGATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 90 bp TATATGAAGAGTTTATTGGGAGTATTGACTCACGTGATCACAAGGTaGAGTCCCACAATAAGCCATGTGCAAGGTGAGGAGCAAGGAAGC +
Preference number: 1 (lower is better)
Translates to: YMKSLLGVLTHVITR*SPTISHVQGEEQGS
Trigger: GCTTCCTTGCTCCTCACCTTGCACATGGCTTATTGTGGGACTTCACCTTGTGATCACGTGAGTCAATACTCCCAATAAACTCTTCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp TGGGGGACGACTCCTAGGGCTGGGCGCCCGTGGGCCCTCCCCTGCTGCCACTGCCAGCCGGCGTCCCCATaGCCCGGTCCGCGACACTGG +
Preference number: 2 (lower is better)
Translates to: WGTTPRAGRPWALPCCHCQPASP*PGPRHW
Trigger: CCAGTGTCGCGGACCGGGCCATGGGGACGCCGGCTG...GCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCTAGGAGTCGTCCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp CTCCGCAGGTCCCCGTACGCGCGGCGCTCCCAGCCCTACAGAGGGGCGGAACCCTGGGGGCCTGAGCCCTaGCTCCAGAGGCCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: LRRSPYARRSQPYRGAEPWGPEP*LQRPRA
Trigger: TGCTCTGGGCCTCTGGAGCCAGGGCTCAGGCCCCCA...GGGTTCCGCCCCTCTGTAGGGCTGGGAGCGCCGCGCGTACGGGGACCTGCGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CAA 90 bp GGCCTGAAGGGCGCGAGCGGCATGGGTGGGGAGCTTGAGGGGGCGTaGGGCTCCCACCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTC +
Preference number: 2 (lower is better)
Translates to: GLKGASGMGGELEGA*GSHQAPDPCAPPAL
Trigger: GAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAGCCCAACGCCCCCTCAAGCTCCCCACCCATGCCGCTCGCGCCCTTCAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp TGGCGCCGCCTGGCCTCGCGTGGTACAAGCCAGCGGCGGGGCACAGCTCCTACTGGACGTGGGTGGGGGTaGGGCGGCCCCTCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: WRRLASRGTSQRRGTAPTGRGWG*GGPSAF
Trigger: AAAGGCTGAGGGGCCGCCGCACCCCCACCCACGTCC...AGTAGGAGCTGTGCCCCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp TGGGGGACGACTCCTAGGGCTGGGCGCCCGTGGGCCCTCCCCTGCTGCCACTGCCCACACCTTGGCCCCTaGCTCGGAGAGCAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: WGTTPRAGRPWALPCCHCPHLGP*LGEQGD
Trigger: GTCACCCTGCTCTCCGAGCCAGGGGCCAAGGTGTGG...GCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCTAGGAGTCGTCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp CTCCGCAGGTCCCCGTACGCGCGGCGCTCCCAGCCCTACAGAGGGGCGGAACCCCCCAGGCAGCAGCACTaGAGGGCCTTTCTACCCTCC +
Preference number: 2 (lower is better)
Translates to: LRRSPYARRSQPYRGAEPPRQQH*RAFLPS
Trigger: GGAGGGTAGAAAGGCCCTGCAGTGCTGCTGCCTGGG...GGGTTCCGCCCCTCTGTAGGGCTGGGAGCGCCGCGCGTACGGGGACCTGCGGAG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp CCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGTGCCGCACGCAGGAGCGGTaGGTTTCAGGCTGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: PNLQRCERLPDGRGTYQCRTQER*VSGCRC
Trigger: GCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCG...GCACTGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp TGGGGGACGACTCCTAGGGCTGGGCGCCCGTGGGCCCTCCCCTGCTGCCACTGCCTGGTTCCTTTGGGATaGGGAGGTGCGACGGCTCCT +
Preference number: 2 (lower is better)
Translates to: WGTTPRAGRPWALPCCHCLVPLG*GGATAP
Trigger: AGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAG...GCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCTAGGAGTCGTCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGGCCTCTCCACTGTaGTGGACACCCTCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVPASPL*WTPSLS
Trigger: GCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGCCGG...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR-3UTR CCA 90 bp TGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTGAGGTCGTGGCCTCTGTCCAGGTaGTGGGGGCATCCGGGGACC +
Preference number: 2 (lower is better)
Translates to: WRASRAPRLQLLCWVVRSWPLSR*WGHPGT
Trigger: GGTCCCCGGATGCCCCCACCACCTGGACAGAGGCCA...CGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp CGCCCCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCACTATGGGGAACTGGCTaGTCCCTCTGCTCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: RPKPAEVRAAPRRPRDLPLWGTG*SLCSGD
Trigger: GTCCCCTGAGCAGAGGGACCAGCCAGTTCCCCATAG...TGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp CTCCGCAGGTCCCCGTACGCGCGGCGCTCCCAGCCCTACAGAGGGGCGGAACCCACTCCGGAACTGGCTTaGGCTCTGGCCTCCAATGCT +
Preference number: 2 (lower is better)
Translates to: LRRSPYARRSQPYRGAEPTPELA*ALASNA
Trigger: AGCATTGGAGGCCAGAGCCCAAGCCAGTTCCGGAGT...GGGTTCCGCCCCTCTGTAGGGCTGGGAGCGCCGCGCGTACGGGGACCTGCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CAA 90 bp TGGGTAGGTTCTCCCTCCGCCGTTGGGTGTGACTCCGGAACTGGCTaGGGCTCTGGCCTCCAATGCTGCTACGGGGCCAGGCCCACCTCC +
Preference number: 2 (lower is better)
Translates to: WVGSPSAVGCDSGTG*GSGLQCCYGARPTS
Trigger: GGAGGTGGGCCTGGCCCCGTAGCAGCATTGGAGGCCAGAGCCCAAGCCAGTTCCGGAGTCACACCCAACGGCGGAGGGAGAACCTACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp TGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTGAGGTCGGAGACAGAGATCCCATaGCCCCTGGAGGGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: WRASRAPRLQLLCWVVRSETEIP*PLEGPR
Trigger: CCTTGGCCCCTCCAGGGGCCATGGGATCTCTGTCTC...CGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp AGGGTTCTGAGTGGGAGCATTGGCACCACCCCACTCCTGAAAGCGGGGGCCTGGAACCTCTTCGGCCTCTaGGCTGCTCCAGGCGGGCCG +
Preference number: 2 (lower is better)
Translates to: RVLSGSIGTTPLLKAGAWNLFGL*AAPGGP
Trigger: CGGCCCGCCTGGAGCAGCCCAGAGGCCGAAGAGGTT...CCAGGCCCCCGCTTTCAGGAGTGGGGTGGTGCCAATGCTCCCACTCAGAACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCTCTGAGCAGCTTTGCTaGAAAGAGCGGAGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCSEQLC*KERRAC
Trigger: GCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGA...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR-3UTR CCA 90 bp CAGCCGATTAGGTGGTGCCCACCTGGATTGAGGGTGGGTCTGCCTCTCCCAGCCCGCGGCTGGTTCCTTTaGGATGCGGAGGTGCGACGG +
Preference number: 2 (lower is better)
Translates to: QPIRWCPPGLRVGLPLPARGWFL*DAEVRR
Trigger: CCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCG...GGCTGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp CCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGTGCCAGTGGGAGGTGGTGTaGTCTACACCCAGAGAACTA +
Preference number: 2 (lower is better)
Translates to: PNLQRCERLPDGRGTYQCQWEVV*STPREL
Trigger: TAGTTCTCTGGGTGTAGACCACACCACCTCCCACTG...GCACTGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCAAAGAGCGGAGAGCCTaGTGCAAACCAGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLKERRA*CKPGTL
Trigger: CAAGGTGCCTGGTTTGCAGCAGGCTCTCCGCTCTTT...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR-3UTR CCA 90 bp CTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCTGAAAGCGGGGGCCTaGCAGGATGAGGATGGCCTG +
Preference number: 2 (lower is better)
Translates to: LALQHQEYWGLPGGRLLGLKAGA*QDEDGL
Trigger: CAGGCCATCCTCATCCTGCCAGGCCCCCGCTTTCAG...CCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp CAGCCGATTAGGTGGTGCCCACCTGGATTGAGGGTGGGTCTGCCTCTCCCAGCCGTCCAGGGTTCTGAGTaGGAGCATTGGCACCACCCC +
Preference number: 2 (lower is better)
Translates to: QPIRWCPPGLRVGLPLPAVQGSE*EHWHHP
Trigger: GGGGTGGTGCCAATGCTCCCACTCAGAACCCTGGAC...GGCTGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR TCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAGCTGGACACCCTCTCTaGGCAGCTTTGCTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPAGHPL*AALLER
Trigger: TCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGC...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR-3UTR GCA 90 bp CCTTCTCCAGGAAGTCCACATGCCCGATGTGGAACAGGTCGAAGGCACCAGCCAGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGA +
Preference number: 2 (lower is better)
Translates to: PSPGSPHARCGTGRRHQPVTHGP*LAQLVG
Trigger: TCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGAC...TGGCTGGTGCCTTCGACCTGTTCCACATCGGGCATGTGGACTTCCTGGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR CCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCTCTGAGCAGCTTTGCTaGAAAGAGCGGAGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLSEQLC*KERRAC
Trigger: GCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGA...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR-3UTR TCA 90 bp GGACATCTCCTGGCTGCTGTGATGGGCTTTGGTTACCAGCAGCATGCGGCCCACATCTCTCCTCCTGAGTaGACACCGGGGGCCCCTTGT +
Preference number: 2 (lower is better)
Translates to: GHLLAAVMGFGYQQHAAHISPPE*TPGAPC
Trigger: ACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGAT...GTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR GCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGAAAGAGCGGAGAGCCTaGTGCAAACCAGGCACCTTG +
Preference number: 2 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVKERRA*CKPGTL
Trigger: CAAGGTGCCTGGTTTGCAGCAGGCTCTCCGCTCTTT...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR-3UTR CCA 90 bp CTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGAACTGGCTTGGGCTCTaGCCTCCAATGCTGCTACGG +
Preference number: 2 (lower is better)
Translates to: LALQHQEYWGLPGGRLLGNWLGL*PPMLLR
Trigger: CCGTAGCAGCATTGGAGGCCAGAGCCCAAGCCAGTT...CCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp CGGGTGAGGGGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACATGACGTAGGGAGCCGCTaGCACCACCTCGTCCACCCA +
Preference number: 2 (lower is better)
Translates to: RVRGLAKTVCILPVLRGHDVGSR*HHLVHP
Trigger: TGGGTGGACGAGGTGGTGCCAGCGGCTCCCTACGTC...ATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR TCA 90 bp CTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGGCTGGACACCCTCTCTaGGCAGCTTTGCTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LALQHQEYWGLPGGRLLGAGHPL*AALLER
Trigger: TCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGC...CCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp TGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTGAGGTCGAAGCCTCATTTTGAATaGGGCGAGACCAGGCAATCT +
Preference number: 2 (lower is better)
Translates to: WRASRAPRLQLLCWVVRSKPHFE*GETRQS
Trigger: AGATTGCCTGGTCTCGCCGCATTCAAAATGAGGCTT...CGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp GCTGGCACCACCTCGTCCACCCATTTGATGGCCTGCACCATCTTGTATCTCTCCACCGGGGGCCCCTTGTaGTTGGCGATCTCCTCATCG +
Preference number: 2 (lower is better)
Translates to: AGTTSSTHLMACTILYLSTGGPL*LAISSS
Trigger: CGATGAGGAGATCGCCAAGCACAAGGGGCCCCCGGT...GGAGAGATACAAGATGGTGCAGGCCATCAAATGGGTGGACGAGGTGGTGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR CCA 90 bp AAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGGTCTGAGCAGCTTTGCTaGAAAGAGCGGAGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: KASVFSWSQALGGRTPCWSEQLC*KERRAC
Trigger: GCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGA...CCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000538936.7
3UTR-3UTR CCA 90 bp CTTGTATCTCTCCTCCTGAGTGAACACCGGGGGCCCCTTGTGCTTGGCGATCTCCCTGGCGCAGCTGGTTaGAGTGGCCGTAATGCACCA +
Preference number: 2 (lower is better)
Translates to: LVSLLLSEHRGPLVLGDLPGAAG*SGRNAP
Trigger: TGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGG...GAGATCGCCAAGCACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR CCA 90 bp CGGGTGAGGGGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACATCCACGAGGTCTGTGGTaGACACCCCTTGCGTGCGCT +
Preference number: 2 (lower is better)
Translates to: RVRGLAKTVCILPVLRGHPRGLW*TPLACA
Trigger: AGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGG...ATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR TCA 90 bp TCGGGTGAGGGGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACATGTGCACGCCTACGATaGGGTAGTCACCCATGGCCC +
Preference number: 2 (lower is better)
Translates to: SGEGACQNCLHTPGTQRTCARLR*GSHPWP
Trigger: GGGCCATGGGTGACTACCTCATCGTAGGCGTGCACA...TGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR TCA 90 bp CGGGTGAGGGGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACATTTGTATCTCTCCTCCTaGGTGAACACCGGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: RVRGLAKTVCILPVLRGHLYLSS*VNTGGP
Trigger: GGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAA...ATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR CCA 90 bp CACGCTCAGAGTCCGTTCATGCAGATTCATGATGGGGTAGTTCTTCCCCTTGTAGGCCAGGGGAACCCCTaGACCGGAGCCGGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: HAQSPFMQIHDGVVLPLVGQGNP*TGAGQA
Trigger: AGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCC...TACAAGGGGAAGAACTACCCCATCATGAATCTGCATGAACGGACTCTGAGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR CCA 90 bp GATGTGGAACAGGTCGAAGGCACCAGCCACATAGATGACTGTCTCCCCTGGCTGGGGGCCCCTTGTGCTTaGCGATCTCCTCATCGGTGT +
Preference number: 2 (lower is better)
Translates to: DVEQVEGTSHIDDCLPWLGAPCA*RSPHRC
Trigger: ACACCGATGAGGAGATCGCCAAGCACAAGGGGCCCC...CAGCCAGGGGAGACAGTCATCTATGTGGCTGGTGCCTTCGACCTGTTCCACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CAA 90 bp AGGCCAGATTCAGCCAGTCTAGTCTTTCCACGTTCCTCTGCCTGCTaGTATCCTGGCTGTGCTGGCAGCCGATTAGGTGGTGCCCACCTG +
Preference number: 2 (lower is better)
Translates to: RPDSASLVFPRSSAC*YPGCAGSRLGGAHL
Trigger: CAGGTGGGCACCACCTAATCGGCTGCCAGCACAGCCAGGATACAAGCAGGCAGAGGAACGTGGAAAGACTAGACTGGCTGAATCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp GATGTGGAACAGGTCGAAGGCACCAGCCACATAGATGACTGTCTCCCCTGGCTGCCCCTTGCGTGCGCTTaGATTCTCTGTACCTCCCAG +
Preference number: 2 (lower is better)
Translates to: DVEQVEGTSHIDDCLPWLPLACA*ILCTSQ
Trigger: CTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGG...CAGCCAGGGGAGACAGTCATCTATGTGGCTGGTGCCTTCGACCTGTTCCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR CCA 90 bp TTCCCCAGTGGGCATGAAAGAAATGAGGGCCCCACAAGCCACATGGACTCTGATGCAAGCGTGTTTTCCTaGAGCCAGGCGCTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: FPSGHERNEGPTSHMDSDASVFS*SQALGG
Trigger: GCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGC...ATCAGAGTCCATGTGGCTTGTGGGGCCCTCATTTCTTTCATGCCCACTGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp GATGTGGAACAGGTCGAAGGCACCAGCCACATAGATGACTGTCTCCCCTGGCTGTGCTGTGATGGGCTTTaGTTACCAGCAGCATGCGGC +
Preference number: 2 (lower is better)
Translates to: DVEQVEGTSHIDDCLPWLCCDGL*LPAACG
Trigger: GCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA...CAGCCAGGGGAGACAGTCATCTATGTGGCTGGTGCCTTCGACCTGTTCCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CAA 90 bp CAGGGCTGGGAGCCCCGCGCAGCACTGCCACCAGGCTTTATTCGGTaGTACCAAAGAGATTTCCGTCAGCCATGTACAAACAGAACAGAG +
Preference number: 2 (lower is better)
Translates to: QGWEPRAALPPGFIR*YQRDFRQPCTNRTE
Trigger: CTCTGTTCTGTTTGTACATGGCTGACGGAAATCTCTTTGGTACAACCGAATAAAGCCTGGTGGCAGTGCTGCGCGGGGCTCCCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR TCA 90 bp CCTTCTCCAGGAAGTCCACATGCCCGATGTGGAACAGGTCGAAGGCACCAGCCAGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTG +
Preference number: 2 (lower is better)
Translates to: PSPGSPHARCGTGRRHQPVMSLP*TQKSQL
Trigger: CAACTGTGACTTCTGTGTTCACGGCAATGACATCAC...TGGCTGGTGCCTTCGACCTGTTCCACATCGGGCATGTGGACTTCCTGGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR TCA 90 bp GGAATCTCCTCTGGCAACACCCTCACAGACACACCCAGTGACAATACTTTGCATAGAGGGTCTCCTTGCTaGGTGGTTCCCTGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: GISSGNTLTDTPSDNTLHRGSPC*VVPWSF
Trigger: GAAGGACCAGGGAACCACTCAGCAAGGAGACCCTCT...ATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR GCA 90 bp CACGCTCAGAGTCCGTTCATGCAGATTCATGATGGGGTAGTTCTTCCCCTTGTAGTGGTGGACACCCCTTaGGTGCGCTTGCATTCTCTG +
Preference number: 2 (lower is better)
Translates to: HAQSPFMQIHDGVVLPLVVVDTP*VRLHSL
Trigger: CAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCAC...TACAAGGGGAAGAACTACCCCATCATGAATCTGCATGAACGGACTCTGAGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR CCA 90 bp GTGACAATACTTTGCATCCTTCAATCCAGTCAAGCTGACACTCAGCATTCACCATGTGAGGGCATGGGCTaGAGCCCCTGGCTGCCTTCC +
Preference number: 2 (lower is better)
Translates to: VTILCILQSSQADTQHSPCEGMG*SPWLPS
Trigger: GGAAGGCAGCCAGGGGCTCCAGCCCATGCCCTCACA...TGGTGAATGCTGAGTGTCAGCTTGACTGGATTGAAGGATGCAAAGTATTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CCA 90 bp GTGACAATACTTTGCATCCTTCAATCCAGTCAAGCTGACACTCAGCATTCACCAGCCGTGACAGGGGTGTaGGAGACAGAGATCCCATGG +
Preference number: 2 (lower is better)
Translates to: VTILCILQSSQADTQHSPAVTGV*ETEIPW
Trigger: CCATGGGATCTCTGTCTCCCACACCCCTGTCACGGC...TGGTGAATGCTGAGTGTCAGCTTGACTGGATTGAAGGATGCAAAGTATTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp GGCACAGCTCCTACTCGGTGGGCCGCGCCGCGGGGCTaGTGTCCGGCCTCCGCAGGTCCCCGTACGCGCGGC +
Preference number: 3 (lower is better)
Translates to: GTAPTRWAAPRG*CPASAGPRTRG
Trigger: GCCGCGCGTACGGGGACCTGCGGAGGCCGGACAGCAGCCCCGCGGCGCGGCCCACCGAGTAGGAGCTGTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp AGGGCTGGGCGCCCGTGGGCCCTCCCCTGCTGCCACTaGGGCCCACGCAAGCCGGGCCTGAAGGGCGCGAGC +
Preference number: 3 (lower is better)
Translates to: RAGRPWALPCCH*GPRKPGLKGAS
Trigger: GCTCGCGCCCTTCAGGCCCGGCTTGCGTGGGCCGCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp CCGCGACACTGGCGGCCGCCGCCCTGGCGCTGTGCCTaGTGCTGGCGCCGCCTGGCCTCGCGTGGTACAAGC +
Preference number: 3 (lower is better)
Translates to: PRHWRPPPWRCA*CWRRLASRGTS
Trigger: GCTTGTACCACGCGAGGCCAGGCGGCGCCAGCAGCAGGCACAGCGCCAGGGCGGCGGCCGCCAGTGTCGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp CACTGGCGGCCGCCGCCCTGGCGCTGTGCCTGCTGCTaGCGCCGCCTGGCCTCGCGTGGTACAAGCCAGCGG +
Preference number: 3 (lower is better)
Translates to: HWRPPPWRCACC*RRLASRGTSQR
Trigger: CCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCAGCAGCAGGCACAGCGCCAGGGCGGCGGCCGCCAGTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp CGCGCCTCCAGCGCTCGCCCGCGCGGCTGGTTCCTTTaGGATGCGGAGGTGCGACGGCTCCTCCGCGCGCGC +
Preference number: 3 (lower is better)
Translates to: RASSARPRGWFL*DAEVRRLLRAR
Trigger: GCGCGCGCGGAGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCGCGGGCGAGCGCTGGAGGCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp CTCGCCCGCGCGGCTGGTTCCTTTGGGATGCGGAGGTaGGACGGCTCCTCCGCGCGCGCCCGCTGCACCCCA +
Preference number: 3 (lower is better)
Translates to: LARAAGSFGMRR*DGSSARARCTP
Trigger: TGGGGTGCAGCGGGCGCGCGCGGAGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCGCGGGCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp CTCCAGCGCTCGCCCGCGCGGCTGGTTCCTTTGGGATaGGGAGGTGCGACGGCTCCTCCGCGCGCGCCCGCT +
Preference number: 3 (lower is better)
Translates to: LQRSPARLVPLG*GGATAPPRAPA
Trigger: AGCGGGCGCGCGCGGAGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCGCGGGCGAGCGCTGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp ACGACTCCTAGGGCTGGGCGCCCGTGGGCCCTCCCCTaGTGCCACTGCGGCCCACGCAAGCCGGGCCTGAAG +
Preference number: 3 (lower is better)
Translates to: TTPRAGRPWALP*CHCGPRKPGLK
Trigger: CTTCAGGCCCGGCTTGCGTGGGCCGCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCTAGGAGTCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 72 bp TCCCCTGCTGCCACTGCGGCCCACGCAAGCCGGGCCTaGAGGGCGCGAGCGGCATGGGTGGGGAGCTTGAGG +
Preference number: 3 (lower is better)
Translates to: SPAATAAHASRA*RARAAWVGSLR
Trigger: CCTCAAGCTCCCCACCCATGCCGCTCGCGCCCTTCAGGCCCGGCTTGCGTGGGCCGCAGTGGCAGCAGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp CCCAGGCTGTGTGCGTCCAGGACGTCGCCCCAAACCTaGAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGA +
Preference number: 3 (lower is better)
Translates to: PRLCASRTSPQT*RGASGSPTAAG
Trigger: TCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGGGGCGACGTCCTGGACGCACACAGCCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp GGGCCGCCCAGAGGTCTTCAGACCCAGGGGCGAAGCTaGCCACGACCCAGCCCCGCGGTGAAGCCGCGCCTA +
Preference number: 3 (lower is better)
Translates to: GPPRGLQTQGRS*PRPSPAVKPRL
Trigger: TAGGCGCGGCTTCACCGCGGGGCTGGGTCGTGGCCAGCTTCGCCCCTGGGTCTGAAGACCTCTGGGCGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp GCGCTGTGCCTGCTGCTGGCGCCGCCTGGCCTCGCGTaGTACAAGCCAGCGGCGGGGCACAGCTCCTACTCG +
Preference number: 3 (lower is better)
Translates to: ALCLLLAPPGLA*YKPAAGHSSYS
Trigger: CGAGTAGGAGCTGTGCCCCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCAGCAGCAGGCACAGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp TGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGTaGAAGGCGAACGTCTTCCTGTCCCTGCGCGCAGCC +
Preference number: 3 (lower is better)
Translates to: CERLPDGRGTYQ*KANVFLSLRAA
Trigger: GGCTGCGCGCAGGGACAGGAAGACGTTCGCCTTGCACTGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp GGCAGCCGAGTGTGCGGCGGCAGGGCAAGGTTGGCCTaGGCCGCCCAGAGGTCTTCAGACCCAGGGGCGAAG +
Preference number: 3 (lower is better)
Translates to: GSRVCGGRARLA*AAQRSSDPGAK
Trigger: CTTCGCCCCTGGGTCTGAAGACCTCTGGGCGGCCCAGGCCAACCTTGCCCTGCCGCCGCACACTCGGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp GCGCGAGCGGCATGGGTGGGGAGCTTGAGGGGGCGTTaGGCTCCCACCAAGCGCCAGATCCTTGCGCGCCTC +
Preference number: 3 (lower is better)
Translates to: ARAAWVGSLRGR*APTKRQILARL
Trigger: GAGGCGCGCAAGGATCTGGCGCTTGGTGGGAGCCCAACGCCCCCTCAAGCTCCCCACCCATGCCGCTCGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp CATCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTaGGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCA +
Preference number: 3 (lower is better)
Translates to: HPGTRWGRTQER*VSGCRCRLPVS
Trigger: TGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR CCA 72 bp AGATCCTTGCGCGCCTCCAGCGCTCGCCCGCGCGGCTaGTTCCTTTGGGATGCGGAGGTGCGACGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: RSLRASSARPRG*FLWDAEVRRLL
Trigger: GAGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCGCGGGCGAGCGCTGGAGGCGCGCAAGGATCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp GGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTaGCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTG +
Preference number: 3 (lower is better)
Translates to: GRTQERCVSGCR*RLPVSLPASPL
Trigger: CAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR GCA 72 bp AGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTaGAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCT +
Preference number: 3 (lower is better)
Translates to: RWGRTQERCVSG*RCRLPVSLPAS
Trigger: AGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR GCA 72 bp GAGGGCTGGAGGCCTGGGTTTCACTCACTGCCAGGCTaGCCGCTGCACTCCCGGCTGCTGGGTGCATGGTGG +
Preference number: 3 (lower is better)
Translates to: EGWRPGFHSLPG*PLHSRLLGAWW
Trigger: CCACCATGCACCCAGCAGCCGGGAGTGCAGCGGGCAGCCTGGCAGTGAGTGAAACCCAGGCCTCCAGCCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp GCCTGCTACAGGGGGTGGCCCCAGGCTTTGGAGGGCTaGAGGCCTGGGTTTCACTCACTGCCAGGCTGCCCG +
Preference number: 3 (lower is better)
Translates to: ACYRGWPQALEG*RPGFHSLPGCP
Trigger: CGGGCAGCCTGGCAGTGAGTGAAACCCAGGCCTCCAGCCCTCCAAAGCCTGGGGCCACCCCCTGTAGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp GCTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTaGGGGACGACTCCTAGGGCTGGGCGCCCGTGGGCC +
Preference number: 3 (lower is better)
Translates to: AGSPASGVLGIA*GTTPRAGRPWA
Trigger: GGCCCACGGGCGCCCAGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CAA 90 bp CCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGTGCGCCAAGAGGGTCTCCTaGCTGAGTGGTTCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: PNLQRCERLPDGRGTYQCAKRVS*LSGSLV
Trigger: GACCAGGGAACCACTCAGCAAGGAGACCCTCTTGGC...GCACTGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 72 bp AACCTCTTCGGCCTCTGGGCTGCTCCAGGCGGGCCGTaGCAGGGGTGTGGGAGACAGAGATCCCATGGCCCC +
Preference number: 3 (lower is better)
Translates to: NLFGLWAAPGGP*QGCGRQRSHGP
Trigger: GGGGCCATGGGATCTCTGTCTCCCACACCCCTGTCACGGCCCGCCTGGAGCAGCCCAGAGGCCGAAGAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp TCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTaGGGGGTGCCCAGTGGGAGGTGGTGTGGTCTACAC +
Preference number: 3 (lower is better)
Translates to: SWSQALGGRTPC*GVPSGRWCGLH
Trigger: GTGTAGACCACACCACCTCCCACTGGGCACCCCCCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
3UTR CCA 72 bp CTCCCTCCGCCGTTGGGTGTGACTCCGGAACTGGCTTaGGCTCTGGCCTCCAATGCTGCTACGGGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LPPPLGVTPELA*ALASNAATGPG
Trigger: GCCTGGCCCCGTAGCAGCATTGGAGGCCAGAGCCCAAGCCAGTTCCGGAGTCACACCCAACGGCGGAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 72 bp GGGGTTCCGCCCACCAGGGCACTGGGAGCAGCCTTCTaGGGAAAGTATGTCCCCGGCGGGTATCGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: GVPPTRALGAAF*GKYVPGGYRVR
Trigger: CCTCACCCGATACCCGCCGGGGACATACTTTCCTCAGAAGGCTGCTCCCAGTGCCCTGGTGGGCGGAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR GCA 72 bp CGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTaGCCGTCTCACTTCCGGCCTCTCCACTGTGCTGGA +
Preference number: 3 (lower is better)
Translates to: RRSGAFQAAGAV*PSHFRPLHCAG
Trigger: TCCAGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR TCA 72 bp CGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTaGGGTCGACCTCACAACAGCAGAGGACAGGCCCAT +
Preference number: 3 (lower is better)
Translates to: RVHLASSSCAGS*GRPHNSRGQAH
Trigger: ATGGGCCTGTCCTCTGCTGTTGTGAGGTCGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 72 bp AGGGGAACGGGACCTGGAAATCCCCAAGCCTGGGTATaGGAAGGCAGCCGAGTGTGCGGCGGCAGGGCAAGG +
Preference number: 3 (lower is better)
Translates to: RGTGPGNPQAWV*EGSRVCGGRAR
Trigger: CCTTGCCCTGCCGCCGCACACTCGGCTGCCTTCTCATACCCAGGCTTGGGGATTTCCAGGTCCCGTTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp TGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTaGTGGGTCGTGAGGTCGACCTCACAACAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: WRASRAPRLQLL*WVVRSTSQQQR
Trigger: CCTCTGCTGTTGTGAGGTCGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 72 bp GCTTGGCGATCTCCTCATCGGTGTGCACGCCTACGATaGGGTAGTCACCCATGGCCCGTGCCTGGCGCAGCT +
Preference number: 3 (lower is better)
Translates to: AWRSPHRCARLR*GSHPWPVPGAA
Trigger: AGCTGCGCCAGGCACGGGCCATGGGTGACTACCTCATCGTAGGCGTGCACACCGATGAGGAGATCGCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR GCA 72 bp GTGCACGCCTACGATGAGGTAGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGAGTGGCCGTAATGCAC +
Preference number: 3 (lower is better)
Translates to: VHAYDEVVTHGP*LAQLVGVAVMH
Trigger: GTGCATTACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACCTCATCGTAGGCGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR GCA 72 bp AGCATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTaGGTGCGCTTGCATTCTCTGTACCTCCCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: SMRPTRSVVDTP*VRLHSLYLPAC
Trigger: GCAGGCTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR GCA 72 bp CCTGGCTGCTGTGATGGGCTTTGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGGTGGACACCCCTTGCG +
Preference number: 3 (lower is better)
Translates to: PGCCDGLWLPAA*GPRGLWWTPLA
Trigger: CGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CCA 72 bp TGTGCAGTGTGGCTGGCTCTCCAGCATCAGGAGTACTaGGGATTGCCTGGGGGACGACTCCTAGGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: CAVWLALQHQEY*GLPGGRLLGLG
Trigger: GCCCAGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAGCCACACTGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CAA 90 bp CAGCCGATTAGGTGGTGCCCACCTGGATTGAGGGTGGGTCTGCCTCTCCCAGCCCAGGAGTACTGGGGATaGCCTGGGGGACGACTCCTA +
Preference number: 3 (lower is better)
Translates to: QPIRWCPPGLRVGLPLPAQEYWG*PGGRLL
Trigger: TAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTG...GGCTGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CAA 90 bp AGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGCATTCTCTGTACCTCCCAGCCGGGGGCCCCTTGTGCTaGGCGATCTCCTCATCGGTG +
Preference number: 3 (lower is better)
Translates to: RSVVDTPCVRLHSLYLPAGGPLC*AISSSV
Trigger: CACCGATGAGGAGATCGCCAAGCACAAGGGGCCCCC...GGCTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR GCA 72 bp TGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTaGTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: CRLPVSLPASPL*WTPSLSSFAGK
Trigger: CTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
3UTR GCA 72 bp CTTGTATCCTGGCTGTGCTGGCAGCCGATTAGGTGGTaGCCACCTGGATTGAGGGTGGGTCTGCCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: LVSWLCWQPIRW*PPGLRVGLPLP
Trigger: TGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTGCCAGCACAGCCAGGATACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp TGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTaGGCTTGCATTCTCTGTACCTCCCAGCCTGCTTTA +
Preference number: 3 (lower is better)
Translates to: CGPRGLWWTPLA*ACILCTSQPAL
Trigger: TAAAGCAGGCTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CCA 72 bp TGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTGGTaGACACCCCTTGCGTGCGCTTGCATTCTCTGTACC +
Preference number: 3 (lower is better)
Translates to: WLPAACGPRGLW*TPLACACILCT
Trigger: GGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR CAA 90 bp GCCTCTCCCAGCCCACTGACTCAAATGGGAATCTCCTCTGGCAACACCCTCACAGTTCTCCCTCCGCCGTaGGGTGTGACTCCGGAACTG +
Preference number: 3 (lower is better)
Translates to: ASPSPLTQMGISSGNTLTVLPPP*GVTPEL
Trigger: CAGTTCCGGAGTCACACCCAACGGCGGAGGGAGAAC...TGTGAGGGTGTTGCCAGAGGAGATTCCCATTTGAGTCAGTGGGCTGGGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp GGCGGGTATCGGGTGAGGGGGCTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGAGGACATCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: GGYRVRGLAKTV*ILPVLRGHLLA
Trigger: AGCCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCGATACCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CCA 72 bp TCCACGTTCCTCTGCCTGCTTGTATCCTGGCTGTGCTaGCAGCCGATTAGGTGGTGCCCACCTGGATTGAGG +
Preference number: 3 (lower is better)
Translates to: STFLCLLVSWLC*QPIRWCPPGLR
Trigger: CCTCAATCCAGGTGGGCACCACCTAATCGGCTGCCAGCACAGCCAGGATACAAGCAGGCAGAGGAACGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp CTTTGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTaGTGGACACCCCTTGCGTGCGCTTGCATTCTCTGT +
Preference number: 3 (lower is better)
Translates to: LWLPAACGPRGL*WTPLACACILC
Trigger: ACAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CCA 72 bp ACTCAGAGGACATCTCCTGGCTGCTGTGATGGGCTTTaGTTACCAGCAGCATGCGGCCCACGAGGTCTGTGG +
Preference number: 3 (lower is better)
Translates to: TQRTSPGCCDGL*LPAACGPRGLW
Trigger: CCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGATGTCCTCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR TCA 72 bp CATTTGATGGCCTGCACCATCTTGTATCTCTCCTCCTaGGTGAACACCGGGGGCCCCTTGTGCTTGGCGATC +
Preference number: 3 (lower is better)
Translates to: HLMACTILYLSS*VNTGGPLCLAI
Trigger: GATCGCCAAGCACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAAGATGGTGCAGGCCATCAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR CCA 72 bp TCTAGTCTTTCCACGTTCCTCTGCCTGCTTGTATCCTaGCTGTGCTGGCAGCCGATTAGGTGGTGCCCACCT +
Preference number: 3 (lower is better)
Translates to: SSLSTFLCLLVS*LCWQPIRWCPP
Trigger: AGGTGGGCACCACCTAATCGGCTGCCAGCACAGCCAGGATACAAGCAGGCAGAGGAACGTGGAAAGACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CCA 72 bp GTGCGAGGGCGGGAAGCATCCAGCATGGGAGAAAGATaGAGGCCAGATTCAGCCAGTCTAGTCTTTCCACGT +
Preference number: 3 (lower is better)
Translates to: VRGREASSMGER*RPDSASLVFPR
Trigger: ACGTGGAAAGACTAGACTGGCTGAATCTGGCCTCCATCTTTCTCCCATGCTGGATGCTTCCCGCCCTCGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CAA 90 bp CTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCCAGGCTTTATTCGGTaGTACCAAAGAGATTTCCGT +
Preference number: 3 (lower is better)
Translates to: LALQHQEYWGLPGGRLLGPGFIR*YQRDFR
Trigger: ACGGAAATCTCTTTGGTACAACCGAATAAAGCCTGG...CCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 72 bp TGGGGCTCCTTCCCAGAAGCAAACTGGATGATCTTCTaGGATGTCTGCAGGAACTGGGATACCCCGGTCCAG +
Preference number: 3 (lower is better)
Translates to: WGSFPEANWMIF*DVCRNWDTPVQ
Trigger: CTGGACCGGGGTATCCCAGTTCCTGCAGACATCTCAGAAGATCATCCAGTTTGCTTCTGGGAAGGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR GCA 72 bp GCCAGATTCAGCCAGTCTAGTCTTTCCACGTTCCTCTaGCTGCTTGTATCCTGGCTGTGCTGGCAGCCGATT +
Preference number: 3 (lower is better)
Translates to: ARFSQSSLSTFL*LLVSWLCWQPI
Trigger: AATCGGCTGCCAGCACAGCCAGGATACAAGCAGGCAGAGGAACGTGGAAAGACTAGACTGGCTGAATCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CAA 90 bp TGCTGTGATGGGCTTTGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTGGTGGACACAGAAGTCACAGTaGTATTTGTCCAGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: CCDGLWLPAACGPRGLWWTQKSQ*YLSRVS
Trigger: AGAGACCCTGGACAAATACAACTGTGACTTCTGTGT...CCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR TCA 72 bp CCCAAGAGAAGACATGACCAGGACCTTGGGGGAGCATaGAATGGTGAGGGCACAGTGAGCTTGAAGGCTGAT +
Preference number: 3 (lower is better)
Translates to: PKRRHDQDLGGA*NGEGTVSLKAD
Trigger: ATCAGCCTTCAAGCTCACTGTGCCCTCACCATTTCATGCTCCCCCAAGGTCCTGGTCATGTCTTCTCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR-3UTR CAA 90 bp CACGCTCAGAGTCCGTTCATGCAGATTCATGATGGGGTAGTTCTTCCCCTTGTAACCTCGTCCACCCATTaGATGGCCTGCACCATCTTG +
Preference number: 3 (lower is better)
Translates to: HAQSPFMQIHDGVVLPLVTSSTH*MACTIL
Trigger: CAAGATGGTGCAGGCCATCAAATGGGTGGACGAGGT...TACAAGGGGAAGAACTACCCCATCATGAATCTGCATGAACGGACTCTGAGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR-3UTR CAA 90 bp GGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACATCTCCTGGCTAAGTCACAGTTGTATTaGTCCAGGGTCTCTAGTGTA +
Preference number: 3 (lower is better)
Translates to: GLAKTVCILPVLRGHLLAKSQLY*SRVSSV
Trigger: TACACTAGAGACCCTGGACAAATACAACTGTGACTT...AGCCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
3UTR TCA 72 bp AATCTCCTCTGGCAACACCCTCACAGACACACCCAGTaGCAATACTTTGCATCCTTCAATCCAGTCAAGCTG +
Preference number: 3 (lower is better)
Translates to: NLLWQHPHRHTQ*QYFASFNPVKL
Trigger: CAGCTTGACTGGATTGAAGGATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR GCA 72 bp GCAACACCCTCACAGACACACCCAGTGACAATACTTTaGATCCTTCAATCCAGTCAAGCTGACACTCAGCAT +
Preference number: 3 (lower is better)
Translates to: ATPSQTHPVTIL*ILQSSQADTQH
Trigger: ATGCTGAGTGTCAGCTTGACTGGATTGAAGGATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR TCA 72 bp AGTTTATTGGGAGTATTGACTCACGTGATCACAAGGTaGAGTCCCACAATAAGCCATGTGCAAGGTGAGGAG +
Preference number: 3 (lower is better)
Translates to: SLLGVLTHVITR*SPTISHVQGEE
Trigger: CTCCTCACCTTGCACATGGCTTATTGTGGGACTTCACCTTGTGATCACGTGAGTCAATACTCCCAATAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CAA 72 bp GCGCGCCTCCAGCGCTCGCCCGCGCGGCTGGTTCCTTaGGGATGCGGAGGTGCGACGGCTCCTCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: ARLQRSPARLVP*GCGGATAPPRA
Trigger: CGCGCGCGGAGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCGCGGGCGAGCGCTGGAGGCGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CTCCCACCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTCGCCCGCGCGGCTGGCAGCCGGCGTCCCCATaGCCCGGTCCGCGACACTGG +
Preference number: 4 (lower is better)
Translates to: LPPSARSLRASSARPRGWQPASP*PGPRHW
Trigger: CCAGTGTCGCGGACCGGGCCATGGGGACGCCGGCTG...CCAGCCGCGCGGGCGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CAA 72 bp CCACGACCCAGCCCCGCGGTGAAGCCGCGCCTAGCCTaGGTGCTCCCTGGGGGAAGTGCAGGGCCACGGCTG +
Preference number: 4 (lower is better)
Translates to: PRPSPAVKPRLA*VLPGGSAGPRL
Trigger: CAGCCGTGGCCCTGCACTTCCCCCAGGGAGCACCAAGGCTAGGCGCGGCTTCACCGCGGGGCTGGGTCGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CGCCCCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGCGCCTCCCCGGAGCTaGAACTGCACCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RPKPAEVRAAPRRPRDLPAPPRS*NCTPGC
Trigger: GCAGCCTGGGGTGCAGTTGCAGCTCCGGGGAGGCGC...TGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGTGCTGGCGCTGTGCCTGCTaGTGGCGCCGCCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PNLQRCERLPDGRGTYQCWRCAC*WRRLAS
Trigger: CGAGGCCAGGCGGCGCCAGCAGCAGGCACAGCGCCA...GCACTGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGTGCACCCAGGGGCGAAGCTaGCCACGACCCAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PNLQRCERLPDGRGTYQCTQGRS*PRPSPA
Trigger: CGCGGGGCTGGGTCGTGGCCAGCTTCGCCCCTGGGT...GCACTGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CCTTCCTGGGCTGTGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGCACCGTCCCACTCGGTaGCCCCAGGCCCCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: PSWAVESLACTSPPAPVLHRPTR*PQAPPA
Trigger: CGCCGGAGGGGCCTGGGGTCACCGAGTGGGACGGTG...CAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCACAGCCCAGGAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCTGCCAGGCTGCCCGCTaGACTCCCGGCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCCQAAR*TPGCWV
Trigger: CACCCAGCAGCCGGGAGTGCAGCGGGCAGCCTGGCA...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp AGGGCGCGAGCGGCATGGGTGGGGAGCTTGAGGGGGCGTTGGGCTCCCACCAAGTGGGCCCTCCCCTGCTaGCACTGCGGCCCACGCAAG +
Preference number: 4 (lower is better)
Translates to: RARAAWVGSLRGRWAPTKWALPC*HCGPRK
Trigger: CTTGCGTGGGCCGCAGTGGCAGCAGGGGAGGGCCCA...CTTGGTGGGAGCCCAACGCCCCCTCAAGCTCCCCACCCATGCCGCTCGCGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGGGCCAGGGGAACCCCTaGACCGGAGCCGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVGQGNP*TGAGQA
Trigger: AGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCC...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCCCCATGGCCCGTGCCTaGCGCAGCTGGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGAPMARA*RSWLEW
Trigger: CCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGG...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp GCCCGGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTTGCTGGTGCCCATGGCCCGTGCCTaGCGCAGCTGGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ARRPGEPLDRSRASWLLVPMARA*RSWLEW
Trigger: CCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGG...CACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGGCAGGACACCGTGTTaGGGGGTGCCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGAGRTPC*GVPSGR
Trigger: CCTCCCACTGGGCACCCCCCAACACGGTGTCCTGCC...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp TGGCGCCGCCTGGCCTCGCGTGGTACAAGCCAGCGGCGGGGCACAGCTCCTACTAGGGCGCGAGCGGCATaGGTGGGGAGCTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WRRLASRGTSQRRGTAPTRARAA*VGSLRG
Trigger: CCCCCTCAAGCTCCCCACCCATGCCGCTCGCGCCCT...AGTAGGAGCTGTGCCCCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGTGCGGCTCTGGCCTCCAATaGTGCTACGGGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PNLQRCERLPDGRGTYQCGSGLQ*CYGARP
Trigger: GGGCCTGGCCCCGTAGCAGCATTGGAGGCCAGAGCC...GCACTGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCCAGATCTCAGCGCGGTaGCTGCACCGGAGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGAQISAR*LHRRGR
Trigger: CCGACCTCTCCGGTGCAGCCACCGCGCTGAGATCTG...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGACGTAGGGAGCCGCTaGCACCACCTCGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGADVGSR*HHLVHP
Trigger: TGGGTGGACGAGGTGGTGCCAGCGGCTCCCTACGTC...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGGCCCACGAGGTCTGTaGTGGACACCCCTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGAGPRGL*WTPLAC
Trigger: GCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCC...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TGGCGCCGCCTGGCCTCGCGTGGTACAAGCCAGCGGCGGGGCACAGCTCCTACTTGGCCTCTGTCCAGGTaGTGGGGGCATCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: WRRLASRGTSQRRGTAPTWPLSR*WGHPGT
Trigger: GGTCCCCGGATGCCCCCACCACCTGGACAGAGGCCA...AGTAGGAGCTGTGCCCCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGGGGGCGTTGGGCTCCCACCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTCGTGCACTCCCGGCTGCTaGGTGCATGGTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGRWAPTKRQILARLQRSCTPGC*VHGGGR
Trigger: CCTGCCCCCACCATGCACCCAGCAGCCGGGAGTGCA...CGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAGCCCAACGCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCGTGCAGGGCCACGGCTaGCCCGGTTCCCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCVQGHG*PGSQCP
Trigger: AGGACACTGGGAACCGGGCCAGCCGTGGCCCTGCAC...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGGGCTGTGCCGCCTGCTaGCTGGCAGCCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLGCAAC*LAASRK
Trigger: CTTCCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCC...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCCCGGCCTCTCCACTGTaGTGGACACCCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGAPASPL*WTPSLS
Trigger: GCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGCCGG...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCACCGGGGGCCCCTTGTaGTTGGCGATCTCCTCATCG +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGATGGPL*LAISSS
Trigger: CGATGAGGAGATCGCCAAGCACAAGGGGCCCCCGGT...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGGGGGCGTTGGGCTCCCACCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTCGGACAGGCCCATGGGGTaGCACATGGGCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGRWAPTKRQILARLQRSDRPMG*HMGQVL
Trigger: CAGCACCTGGCCCATGTGGCACCCCATGGGCCTGTC...CGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAGCCCAACGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp AGGGGGCGTTGGGCTCCCACCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTCGGATGAGGATGGCCTGTaGCCCCCACACCTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGRWAPTKRQILARLQRSDEDGL*PPHLGP
Trigger: GGGGCCAAGGTGTGGGGGGCACAGGCCATCCTCATC...CGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAGCCCAACGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CGCCCCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCACCCAGGCAGCAGCACTaGAGGGCCTTTCTACCCTCC +
Preference number: 4 (lower is better)
Translates to: RPKPAEVRAAPRRPRDLPPRQQH*RAFLPS
Trigger: GGAGGGTAGAAAGGCCCTGCAGTGCTGCTGCCTGGG...TGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGGGCCCACGAGGTCTGTaGTGGACACCCCTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVGPRGL*WTPLAC
Trigger: GCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCC...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCCATCCGGGGACCAGGTaGGGGCGCACGCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESHPGTR*GRTQER
Trigger: CCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGATG...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCCGCCACAGCTGGGTaGGCAGTCAGTGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCPATAG*AVSVAS
Trigger: AGAGGCCACACTGACTGCCCACCCAGCTGTGGCGGG...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp GCCCGGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTTGCTGGTGCACCAGCCACATAGATaGCTGTCTCCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ARRPGEPLDRSRASWLLVHQPHR*LSPLAG
Trigger: CCCAGCCAGGGGAGACAGTCATCTATGTGGCTGGTG...CACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp CGCCCCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCACGCAGTCCAGGGTTCTaGGTGGGAGCATTGGCACCA +
Preference number: 4 (lower is better)
Translates to: RPKPAEVRAAPRRPRDLPRSPGF*VGALAP
Trigger: TGGTGCCAATGCTCCCACTCAGAACCCTGGACTGCG...TGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCGGAGAGTTGGGGGCCTaGGCCCTGGCTCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESGELGA*ALAPEA
Trigger: GGCCTCTGGAGCCAGGGCTCAGGCCCCCAACTCTCC...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp AACAGCAGAGGACAGGCCCATGGGGTGCCACATGGGCCAGGTGCTGTAGGGCAGGACTGCCTCGCCGCCTaGGCCCGGACCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NSRGQAHGVPHGPGAVGQDCLAA*ARTSPG
Trigger: GCCAGGAGAGGTCCGGGCTCAGGCGGCGAGGCAGTC...CTGCCCTACAGCACCTGGCCCATGTGGCACCCCATGGGCCTGTCCTCTGCTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCTCAGCGCGGTGGCTaGACCGGAGAGGTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLSQRGG*TGEVGV
Trigger: CACGCCGACCTCTCCGGTGCAGCCACCGCGCTGAGA...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR GCA 90 bp ACAGGGACGCTCGCCCGGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCGTGGTGGACACCCCTTaGGTGCGCTTGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: TGTLARRPGEPLDRSRASVVDTP*VRLHSL
Trigger: CAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCAC...GCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGGCGAGCGTCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCAGGGGCTGTGCCGCCTaGTGCCTGGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESRGCAA*CLAASR
Trigger: CCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCCCCT...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAAGGGGCTGTGCCGCCTaGTGCCTGGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPRGCAA*CLAASR
Trigger: CCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCCCCT...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCCTCCCCCAGGGGCTGTaGCGCCTGCTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSLPQGL*RLLPGS
Trigger: GCTGCCAGGCAGCAGGCGGCACAGCCCCTGGGGGAG...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp CCTTCCTGGGCTGTGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGTTTGGGATGCGGAGGTaGGACGGCTCCTCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: PSWAVESLACTSPPAPVLFGMRR*DGSSAR
Trigger: GCGCGCGGAGGAGCCGTCGCACCTCCGCATCCCAAA...CAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCACAGCCCAGGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTGAGGTCGCAAGCGCCAGATCCTTaGGCGCCTCCAGCGCTCGCC +
Preference number: 4 (lower is better)
Translates to: WRASRAPRLQLLCWVVRSQAPDP*APPALA
Trigger: GGCGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTG...CGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp ACAGGGACGCTCGCCCGGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCGGGCAAGCTGGTTGCTaGTGGTTACGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGTLARRPGEPLDRSRASGQAGC*WLRRSR
Trigger: CCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCC...GCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGGCGAGCGTCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCACGAGGTCTGTGGTaGACACCCCTTGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVPRGLW*TPLACA
Trigger: AGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGG...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTGGCCTCTGTCCAGGTaGTGGGGGCATCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLWPLSR*WGHPGT
Trigger: GGTCCCCGGATGCCCCCACCACCTGGACAGAGGCCA...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGACCTCCCGCCACAGCTaGGTGGGCAGTCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLTSRHS*VGSQCG
Trigger: GCCACACTGACTGCCCACCCAGCTGTGGCGGGAGGT...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTGCCCAGTGGGAGGTaGTGTGGTCTACACCCAGAG +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGAVPSGR*CGLHPE
Trigger: CTCTGGGTGTAGACCACACCACCTCCCACTGGGCAC...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp TGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTGAGGTCGAACCTCTTCGGCCTCTaGGCTGCTCCAGGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: WRASRAPRLQLLCWVVRSNLFGL*AAPGGP
Trigger: CGGCCCGCCTGGAGCAGCCCAGAGGCCGAAGAGGTT...CGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TGGCGCCGCCTGGCCTCGCGTGGTACAAGCCAGCGGCGGGGCACAGCTCCTACTAGGGCAAGGTTGGCCTaGGCCGCCCAGAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: WRRLASRGTSQRRGTAPTRARLA*AAQRSS
Trigger: TGAAGACCTCTGGGCGGCCCAGGCCAACCTTGCCCT...AGTAGGAGCTGTGCCCCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CAGCCGATTAGGTGGTGCCCACCTGGATTGAGGGTGGGTCTGCCTCTCCCAGCCCCGCCTGGCCTCGCGTaGTACAAGCCAGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QPIRWCPPGLRVGLPLPAPPGLA*YKPAAG
Trigger: CCCCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGG...GGCTGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp GAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCGCTGTGCCTGCTGCTaGCGCCGCCTGGCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: EAAGKEGKRVFLEPGAGWRCACC*RRLASR
Trigger: ACGCGAGGCCAGGCGGCGCCAGCAGCAGGCACAGCG...CCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCAGGCTGCAGAGCCCCTaGCAAGCCACTGGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGARLQSP*QATGVG
Trigger: ACCTACACCAGTGGCTTGCCAGGGGCTCTGCAGCCT...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp AGGGGGCGTTGGGCTCCCACCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTCGATCTCTCCTCCTGAGTaGACACCGGGGGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: RGRWAPTKRQILARLQRSISPPE*TPGAPC
Trigger: ACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGAT...CGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAGCCCAACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCTTGTATCTCTCCTCCTaGGTGAACACCGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCLYLSS*VNTGGP
Trigger: GGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAA...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCTCCAATCACCACTTCTaGCACGTACCGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGASNHHF*HVPAGQ
Trigger: CTGGCCTGCCGGTACGTGTCAGAAGTGGTGATTGGA...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTCACGCAAGCCGGGCCTaGAGGGCGCGAGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAHASRA*RARAAW
Trigger: CCATGCCGCTCGCGCCCTTCAGGCCCGGCTTGCGTG...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGTGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVWLPAA*GPRGLW
Trigger: CCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCA...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp TGGGGGACGACTCCTAGGGCTGGGCGCCCGTGGGCCCTCCCCTGCTGCCACTGCTCCAGGAAGTCCACATaGCCGATGTGGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: WGTTPRAGRPWALPCCHCSRKST*PMWNRS
Trigger: CGACCTGTTCCACATCGGGCATGTGGACTTCCTGGA...GCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCTAGGAGTCGTCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCGGCTGTGCCGCCTGCTaGCTGGCAGCCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLGCAAC*LAASRK
Trigger: CTTCCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCC...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAGGGGCTGTGCCGCCTaGTGCCTGGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSRGCAA*CLAASR
Trigger: CCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCCCCT...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCTCCCTAAAGCCCTCTaGTCTGCACCTCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVLPKAL*SAPPAT
Trigger: TGTGGCGGGAGGTGCAGAGCAGAGGGCTTTAGGGAG...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GGTATGAGAAGGCAGCCGAGTGTGCGGCGGCAGGGCAAGGTTGGCCTGGGCCGCACCGGGGGCCCCTTGTaGTTGGCGATCTCCTCATCG +
Preference number: 4 (lower is better)
Translates to: GMRRQPSVRRQGKVGLGRTGGPL*LAISSS
Trigger: CGATGAGGAGATCGCCAAGCACAAGGGGCCCCCGGT...GCGGCCCAGGCCAACCTTGCCCTGCCGCCGCACACTCGGCTGCCTTCTCATACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCTGGCGCAGCTGGTTaGAGTGGCCGTAATGCACCA +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVPGAAG*SGRNAP
Trigger: TGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGG...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACCCATGGCCCGTGCCTaGCGCAGCTGGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPPMARA*RSWLEW
Trigger: CCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGG...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCCCATGGCCCGTGCCTaGCGCAGCTGGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLPMARA*RSWLEW
Trigger: CCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGG...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCACGAGGTCTGTGGTaGACACCCCTTGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLPRGLW*TPLACA
Trigger: AGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGG...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGGCCTCTCCACTGTGCTaGACACCCTCTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVASPLC*TPSLSS
Trigger: GCTGCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGC...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTCATCCGGGGACCAGGTaGGGGCGCACGCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAHPGTR*GRTQER
Trigger: CCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGATG...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCCCCGCCACAGCTGGGTaGGCAGTCAGTGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLPATAG*AVSVAS
Trigger: AGAGGCCACACTGACTGCCCACCCAGCTGTGGCGGG...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGGGGGCCCCTTGTGCTTaGCGATCTCCTCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVGAPCA*RSPHRC
Trigger: ACACCGATGAGGAGATCGCCAAGCACAAGGGGCCCC...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCTTCCTGGGCTGTGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGCCACACCTTGGCCCCTaGCTCGGAGAGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PSWAVESLACTSPPAPVLPHLGP*LGEQGD
Trigger: GTCACCCTGCTCTCCGAGCCAGGGGCCAAGGTGTGG...CAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCACAGCCCAGGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAGCTCGCCCGCGCGGCTaGTTCCTTTGGGATGCGGAG +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPARPRG*FLWDAE
Trigger: CTCCGCATCCCAAAGGAACCAGCCGCGCGGGCGAGC...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCAGCTTGAGGGGGCGTTaGGCTCCCACCAAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLSLRGR*APTKRQ
Trigger: CTGGCGCTTGGTGGGAGCCCAACGCCCCCTCAAGCT...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TGGCGCCGCCTGGCCTCGCGTGGTACAAGCCAGCGGCGGGGCACAGCTCCTACTGTACTGGGGATTGCCTaGGGGACGACTCCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: WRRLASRGTSQRRGTAPTVLGIA*GTTPRA
Trigger: AGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTAC...AGTAGGAGCTGTGCCCCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGGGCGCGAGCGGCATGGGTGGGGAGCTTGAGGGGGCGTTGGGCTCCCACCAAGGGGCACTGTGCAGTGTaGCTGGCTCTCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: RARAAWVGSLRGRWAPTKGHCAV*LALQHQ
Trigger: CTGATGCTGGAGAGCCAGCCACACTGCACAGTGCCC...CTTGGTGGGAGCCCAACGCCCCCTCAAGCTCCCCACCCATGCCGCTCGCGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGTGTGCACGCCTACGATaGGGTAGTCACCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLCARLR*GSHPWP
Trigger: GGGCCATGGGTGACTACCTCATCGTAGGCGTGCACA...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGATCTCTCCTCCTGAGTaGACACCGGGGGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLISPPE*TPGAPC
Trigger: ACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGAT...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCACCAGCCACATAGATaGCTGTCTCCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLHQPHR*LSPLAG
Trigger: CCCAGCCAGGGGAGACAGTCATCTATGTGGCTGGTG...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGTTAGGAGCTCTGCTGTaGCCGCGTACGGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLLGALL*PRTGLQ
Trigger: TTGGAGCCCCGTACGCGGTCACAGCAGAGCTCCTAA...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AGGGTTCTGAGTGGGAGCATTGGCACCACCCCACTCCTGAAAGCGGGGGCCTGGGCTCGGAGAGCAGGGTaGCAGGCTGCCTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RVLSGSIGTTPLLKAGAWARRAG*QAAFLG
Trigger: GCCCAGGAAGGCAGCCTGTCACCCTGCTCTCCGAGC...CCAGGCCCCCGCTTTCAGGAGTGGGGTGGTGCCAATGCTCCCACTCAGAACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAGGCTGCGGAGCCTCGTaGGTCCGGCGTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKGCGAS*VRRAGD
Trigger: GTCCCCGGCACGCCGGACTCACGAGGCTCCGCAGCC...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGAGGGCGCGGAGCCTCTaGAGCCCGACCCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGRARSL*SPTLPA
Trigger: TGCCGGGAGGGTCGGGCTGCAGAGGCTCCGCGCCCT...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR GCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPVTHGP*LAQLVG
Trigger: TCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGAC...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLVTHGP*LAQLVG
Trigger: TCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGAC...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGGTGGTGGACACCCCTTaGGTGCGCTTGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVVVDTP*VRLHSL
Trigger: CAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCAC...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGTGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLWLPAA*GPRGLW
Trigger: CCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCA...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTCCGCAGGTCCCCGTACGCGCGGCGCTCCCAGCCCTACAGAGGGGCGGAACCCGCCCACCAGGGCACTTaGCAAAACTGTCTGCATACT +
Preference number: 4 (lower is better)
Translates to: LRRSPYARRSQPYRGAEPAHQGT*QNCLHT
Trigger: AGTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGC...GGGTTCCGCCCCTCTGTAGGGCTGGGAGCGCCGCGCGTACGGGGACCTGCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TGGCGCCGCCTGGCCTCGCGTGGTACAAGCCAGCGGCGGGGCACAGCTCCTACTGATGTAGGGCCTCTCTaGCAGCCTGTGCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: WRRLASRGTSQRRGTAPTDVGPL*QPVHLL
Trigger: GAGAAGGTGCACAGGCTGGCAGAGAGGCCCTACATC...AGTAGGAGCTGTGCCCCGCCGCTGGCTTGTACCACGCGAGGCCAGGCGGCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTGGCTGTGCCGCCTGCTaGCTGGCAGCCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPGCAAC*LAASRK
Trigger: CTTCCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCC...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp GAGTGGCGAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCGGCTGTGCCGCCTGCTaGCTGGCAGCCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EWRSCREGRQACFPGARRGCAAC*LAASRK
Trigger: CTTCCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCC...GCGCCTGGCTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTCGCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCTCCCCCAGGGGCTGTaGCGCCTGCTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGLPQGL*RLLPGS
Trigger: GCTGCCAGGCAGCAGGCGGCACAGCCCCTGGGGGAG...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGACTCCCCCAGGGGCTGTaGCGCCTGCTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: EPGQLERAALQSPMSKRRLPQGL*RLLPGS
Trigger: GCTGCCAGGCAGCAGGCGGCACAGCCCCTGGGGGAG...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGCTCCCCCAGGGGCTGTaGCGCCTGCTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGELPQGL*RLLPGS
Trigger: GCTGCCAGGCAGCAGGCGGCACAGCCCCTGGGGGAG...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCTCCCCCAGGGGCTGTaGCGCCTGCTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTLPQGL*RLLPGS
Trigger: GCTGCCAGGCAGCAGGCGGCACAGCCCCTGGGGGAG...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAGCTGCAGGTGCCGTCTaGCCGTCTCACTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPAAGAV*PSHFRP
Trigger: AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGC...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCTGGGCGCCCGCCTCCAGCTCCTGTaGTGGGTCGTGAGGTCGACC +
Preference number: 4 (lower is better)
Translates to: QHQEYWGLPGGRLLGLGARLQLL*WVVRST
Trigger: GGTCGACCTCACGACCCAGCACAGGAGCTGGAGGCG...GGCGCCCAGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCTGGGCGCCGTGGAGAGCCTCGCGTaGACCTCGCCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QHQEYWGLPGGRLLGLGAVESLA*TSPPAP
Trigger: AGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCAC...GGCGCCCAGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CCTTCCTGGGCTGTGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGCAGCCTTTGCTTGCCTaGCCCCCAGGCTGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: PSWAVESLACTSPPAPVLQPLLA*PPGCVR
Trigger: ACGCACACAGCCTGGGGGGCAGGCAAGCAAAGGCTG...CAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCACAGCCCAGGAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTGGCCAGGGGAACCCCTaGACCGGAGCCGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAGQGNP*TGAGQA
Trigger: AGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCC...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCCTCGCTGGCAGTGGTaGGGAGCAGGTGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLPRWQW*GAGAPS
Trigger: AGAAGGGGCACCTGCTCCCCACCACTGCCAGCGAGG...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCTGCTGTGATGGGCTTTaGTTACCAGCAGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGACCDGL*LPAACG
Trigger: GCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp GCCCGGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTTGCTGGTGTGCTGTGATGGGCTTTaGTTACCAGCAGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: ARRPGEPLDRSRASWLLVCCDGL*LPAACG
Trigger: GCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA...CACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCATCCGGGGACCAGGTaGGGGCGCACGCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKAHPGTR*GRTQER
Trigger: CCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGATG...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGCATCCGGGGACCAGGTaGGGGCGCACGCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGEHPGTR*GRTQER
Trigger: CCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGATG...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AACAGCAGAGGACAGGCCCATGGGGTGCCACATGGGCCAGGTGCTGTAGGGCAGGGCAGGACACCGTGTTaGGGGGTGCCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NSRGQAHGVPHGPGAVGQGRTPC*GVPSGR
Trigger: CCTCCCACTGGGCACCCCCCAACACGGTGTCCTGCC...CTGCCCTACAGCACCTGGCCCATGTGGCACCCCATGGGCCTGTCCTCTGCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGGGTCTCCTTGCTGAGTaGTTCCCTGGTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVGLLAE*FPGPSQ
Trigger: CTGGGAAGGACCAGGGAACCACTCAGCAAGGAGACC...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTGCGGCAGGGCAAGGTTaGCCTGGGCCGCCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAAAGQG*PGPPRG
Trigger: ACCTCTGGGCGGCCCAGGCCAACCTTGCCCTGCCGC...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGGAGGGGAACGGGACCTaGAAATCCCCAAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLEGNGT*KSPSLG
Trigger: ACCCAGGCTTGGGGATTTCCAGGTCCCGTTCCCCTC...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTGGGGTGCTGGAGGACTaGCAGCCAGGCCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAGVLED*QPGHEG
Trigger: CCCCTCGTGGCCTGGCTGCCAGTCCTCCAGCACCCC...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGACAGCTCCTACTCGGTaGGCCGCGCCGCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQTAPTR*AAPRGC
Trigger: GCAGCCCCGCGGCGCGGCCCACCGAGTAGGAGCTGT...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGTGCCAGCATCAGGAGTACTaGGGATTGCCTGGGGGACGA +
Preference number: 4 (lower is better)
Translates to: PNLQRCERLPDGRGTYQCQHQEY*GLPGGR
Trigger: TCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTG...GCACTGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTTGCCAGGAGAGCGGCTaGCAGTCCTGCCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPCQESG*QSCLVP
Trigger: GGGCACCAGGCAGGACTGCCAGCCGCTCTCCTGGCA...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TGGGGGACGACTCCTAGGGCTGGGCGCCCGTGGGCCCTCCCCTGCTGCCACTGCTGCCAGTGCCTGTCCTaGGAAGATACCCAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: WGTTPRAGRPWALPCCHCCQCLS*EDTQEK
Trigger: CTTCTCTTGGGTATCTTCCCAGGACAGGCACTGGCA...GCAGTGGCAGCAGGGGAGGGCCCACGGGCGCCCAGCCCTAGGAGTCGTCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CAA 72 bp TCTCCCTCCGCCGTTGGGTGTGACTCCGGAACTGGCTaGGGCTCTGGCCTCCAATGCTGCTACGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SPSAVGCDSGTG*GSGLQCCYGAR
Trigger: CCTGGCCCCGTAGCAGCATTGGAGGCCAGAGCCCAAGCCAGTTCCGGAGTCACACCCAACGGCGGAGGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CAA 72 bp GTGTGGCTGGCTCTCCAGCATCAGGAGTACTGGGGATaGCCTGGGGGACGACTCCTAGGGCTGGGCGCCCGT +
Preference number: 4 (lower is better)
Translates to: VWLALQHQEYWG*PGGRLLGLGAR
Trigger: ACGGGCGCCCAGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAGCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp TGGGATACCCCGGTCCAGGGGTTCCGCCCACCAGGGCACTGGGAGCAGCCTTCTTTGTATCTCTCCTCCTaGGTGAACACCGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WDTPVQGFRPPGHWEQPSLYLSS*VNTGGP
Trigger: GGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAA...AGAAGGCTGCTCCCAGTGCCCTGGTGGGCGGAACCCCTGGACCGGGGTATCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCTCGTCCACCCATTTaGTGGCCTGCACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCPRPPI*WPAPSC
Trigger: ACAAGATGGTGCAGGCCATCAAATGGGTGGACGAGG...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCGCTGGACACCCTCTCTaGGCAGCTTTGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCAGHPL*AALLER
Trigger: TCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGC...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTCCGCCGTTGGGTGTaGCTCCGGAACTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVLRRWV*LRNWLG
Trigger: CCCAAGCCAGTTCCGGAGTCACACCCAACGGCGGAG...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGAGGGCGCGGAGCCTCTaGAGCCCGACCCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKRARSL*SPTLPA
Trigger: TGCCGGGAGGGTCGGGCTGCAGAGGCTCCGCGCCCT...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR GCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVVTHGP*LAQLVG
Trigger: TCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGAC...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAGTGCTGGACACCCCTTGCGTaGGCTTGCATTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: PNLQRCERLPDGRGTYQCWTPLA*ACILCT
Trigger: GGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCA...GCACTGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCTGGACACCCCTTGCGTaGGCTTGCATTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCWTPLA*ACILCT
Trigger: GGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCA...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCTCCAGGAAGTCCACATaGCCGATGTGGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCSRKST*PMWNRS
Trigger: CGACCTGTTCCACATCGGGCATGTGGACTTCCTGGA...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGGATGTAGGGCCTCTCTaGCAGCCTGTGCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLDVGPL*QPVHLL
Trigger: GAGAAGGTGCACAGGCTGGCAGAGAGGCCCTACATC...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGGGCTGTGCCGCCTaGTGCCTGGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EPGQLERAALQSPMSKRRRGCAA*CLAASR
Trigger: CCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCCCCT...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAGGGGCTGTGCCGCCTaGTGCCTGGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQRGCAA*CLAASR
Trigger: CCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCCCCT...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCTCCCCCAGGGGCTGTaGCGCCTGCTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKLPQGL*RLLPGS
Trigger: GCTGCCAGGCAGCAGGCGGCACAGCCCCTGGGGGAG...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACCGGCCTCTCCACTGTaGTGGACACCCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPPASPL*WTPSLS
Trigger: GCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGCCGG...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCCGCACGCAGGAGCGGTaGGTTTCAGGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSRTQER*VSGCRC
Trigger: GCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCG...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCACTCACTGCCAGGCTaGCCGCTGCACTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVHSLPG*PLHSRL
Trigger: CAGCCGGGAGTGCAGCGGGCAGCCTGGCAGTGAGTG...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCGGACGTGGGTGGGGGTaGGGCGGCCCCTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGGRGWG*GGPSAF
Trigger: AAAGGCTGAGGGGCCGCCGCACCCCCACCCACGTCC...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCAAGCTGGTTGCTGGTaGTTACGGAGAAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCQAGCW*LRRSRE
Trigger: CTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTG...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACGGAGCCGGGCAAGCTaGTTGCTGGTGGTTACGGAG +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPRSRAS*LLVVTE
Trigger: CTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCG...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCCCTGGCGCAGCTGGTTaGAGTGGCCGTAATGCACCA +
Preference number: 4 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLPGAAG*SGRNAP
Trigger: TGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGG...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTGAGCCTCGCTGGCAGTaGTGGGGAGCAGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAEPRWQ*WGAGAP
Trigger: AGGGGCACCTGCTCCCCACCACTGCCAGCGAGGCTC...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCCAGCCCCTGAAGGCTTaGGAGCCTCGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSQPLKA*EPRWQW
Trigger: CCACTGCCAGCGAGGCTCCCAAGCCTTCAGGGGCTG...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGGGACAACGGGGAGACTaGGGACCCCAGCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTGQRGD*GPQPTR
Trigger: CCGGGTGGGCTGGGGTCCCCAGTCTCCCCGTTGTCC...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCTTGGTGATGATCCGCTaGACGATGAGGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGALVMIR*TMRSVV
Trigger: CACCACAGACCTCATCGTCCAGCGGATCATCACCAA...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCACCTCCCGCCACAGCTaGGTGGGCAGTCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSTSRHS*VGSQCG
Trigger: GCCACACTGACTGCCCACCCAGCTGTGGCGGGAGGT...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGACCTCCCGCCACAGCTaGGTGGGCAGTCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVTSRHS*VGSQCG
Trigger: GCCACACTGACTGCCCACCCAGCTGTGGCGGGAGGT...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTTGCCCCCATCCCTTCTaGCCAGGCCAAGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPCPHPF*PGQVRG
Trigger: CCCTCGGACTTGGCCTGGCCAGAAGGGATGGGGGCA...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTGTGCACGCCTACGATaGGGTAGTCACCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESCARLR*GSHPWP
Trigger: GGGCCATGGGTGACTACCTCATCGTAGGCGTGCACA...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CGCCCCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCACATCTACAGTCAGGGTaGTGTCATTGCCGTGAACAC +
Preference number: 4 (lower is better)
Translates to: RPKPAEVRAAPRRPRDLPHLQSG*CHCREH
Trigger: GTGTTCACGGCAATGACATCACCCTGACTGTAGATG...TGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp GGTATGAGAAGGCAGCCGAGTGTGCGGCGGCAGGGCAAGGTTGGCCTGGGCCGCATCTCCTGGCTGCTGTaGTGGGCTTTGGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: GMRRQPSVRRQGKVGLGRISWLL*WALVTS
Trigger: GCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGAT...GCGGCCCAGGCCAACCTTGCCCTGCCGCCGCACACTCGGCTGCCTTCTCATACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCACCAGCCACATAGATaGCTGTCTCCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPHQPHR*LSPLAG
Trigger: CCCAGCCAGGGGAGACAGTCATCTATGTGGCTGGTG...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAATCACCACTTCTaGCACGTACCGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLSNHHF*HVPAGQ
Trigger: CTGGCCTGCCGGTACGTGTCAGAAGTGGTGATTGGA...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTTTAGGAGCTCTGCTGTaGCCGCGTACGGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPLGALL*PRTGLQ
Trigger: TTGGAGCCCCGTACGCGGTCACAGCAGAGCTCCTAA...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTCCAGGCGGGCCGTaGCAGGGGTGTGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPAPGGP*QGCGRQ
Trigger: CTGTCTCCCACACCCCTGTCACGGCCCGCCTGGAGC...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LALQHQEYWGLPGGRLLGVTHGP*LAQLVG
Trigger: TCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGAC...CCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCGGCTGTGCCGCCTGCTaGCTGGCAGCCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGGCAAC*LAASRK
Trigger: CTTCCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCC...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGGGGCTGTGCCGCCTaGTGCCTGGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRRGCAA*CLAASR
Trigger: CCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCCCCT...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCCCGGCCTCTCCACTGTaGTGGACACCCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSPASPL*WTPSLS
Trigger: GCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGCCGG...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGACCGGGGGCCCCTTGTaGTTGGCGATCTCCTCATCG +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVTGGPL*LAISSS
Trigger: CGATGAGGAGATCGCCAAGCACAAGGGGCCCCCGGT...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTGGGTTTCACTCACTaGCAGGCTGCCCGCTGCACT +
Preference number: 4 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPLGFTH*QAARCT
Trigger: AGTGCAGCGGGCAGCCTGGCAGTGAGTGAAACCCAG...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp GGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTACGTCTTCCTGTCCCTaGGCGCAGCCGACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GRQACFPGARRWVAGHRVTSSCP*AQPTAS
Trigger: CGAGGCAGTCGGCTGCGCGCAGGGACAGGAAGACGT...AACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGCCCATGGCCCGTGCCTaGCGCAGCTGGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQPMARA*RSWLEW
Trigger: CCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGG...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTAGTGCTGGCCAACTaGGTGGCTCTCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPLVLAN*VALFPA
Trigger: CGCAGGGAAGAGAGCCACCCAGTTGGCCAGCACTAG...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCGACGTAGGGAGCCGCTaGCACCACCTCGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVDVGSR*HHLVHP
Trigger: TGGGTGGACGAGGTGGTGCCAGCGGCTCCCTACGTC...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp GCAGCATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGCATTCCACGAGGTCTGTGGTaGACACCCCTTGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: AACGPRGLWWTPLACACIPRGLW*TPLACA
Trigger: AGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGG...AATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCGGCCCACGAGGTCTGTaGTGGACACCCCTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVGPRGL*WTPLAC
Trigger: GCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCC...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCATGGCCCGTGCCTGGCGCAGCTGGTTGGAGTGGCCGTAATGCACCATGTCATGGCCCACGAGGTCTGTaGTGGACACCCCTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: PWPVPGAAGWSGRNAPCHGPRGL*WTPLAC
Trigger: GCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCC...ATGACATGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGTGCTGTGATGGGCTTTaGTTACCAGCAGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLCCDGL*LPAACG
Trigger: GCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTGATGTCTGCAGGAACTaGGATACCCCGGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPDVCRN*DTPVQG
Trigger: CCCCTGGACCGGGGTATCCCAGTTCCTGCAGACATC...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTGAGGTCGAGATGCCCCTTCTCTTaGGCTCCTGGTATGGGTCGG +
Preference number: 4 (lower is better)
Translates to: WRASRAPRLQLLCWVVRSRCPFS*APGMGR
Trigger: CCGACCCATACCAGGAGCCCAAGAGAAGGGGCATCT...CGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGTGGCCTCTGTCCAGGTaGTGGGGGCATCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGEWPLSR*WGHPGT
Trigger: GGTCCCCGGATGCCCCCACCACCTGGACAGAGGCCA...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGATGGCCTCTGTCCAGGTaGTGGGGGCATCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: EPGQLERAALQSPMSKRRWPLSR*WGHPGT
Trigger: GGTCCCCGGATGCCCCCACCACCTGGACAGAGGCCA...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGTGGCCTCTGTCCAGGTaGTGGGGGCATCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQWPLSR*WGHPGT
Trigger: GGTCCCCGGATGCCCCCACCACCTGGACAGAGGCCA...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCCCGCCACAGCTGGGTaGGCAGTCAGTGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LALQHQEYWGLPGGRLLGPATAG*AVSVAS
Trigger: AGAGGCCACACTGACTGCCCACCCAGCTGTGGCGGG...CCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCACCTCCCGCCACAGCTaGGTGGGCAGTCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVTSRHS*VGSQCG
Trigger: GCCACACTGACTGCCCACCCAGCTGTGGCGGGAGGT...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCAGTGGGAGGTGGTGTaGTCTACACCCAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVQWEVV*STPREL
Trigger: TAGTTCTCTGGGTGTAGACCACACCACCTCCCACTG...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGGGCAGGACACCGTGTTaGGGGGTGCCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQGRTPC*GVPSGR
Trigger: CCTCCCACTGGGCACCCCCCAACACGGTGTCCTGCC...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGGCAAGCGTGTTTTCCTaGAGCCAGGCGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVASVFS*SQALGG
Trigger: GCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGC...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000538936.7
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCGGCTGCTGGGTGCATaGTGGGGGCAGGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGRLLGA*WGQGQE
Trigger: CTCTTGGCCCTGCCCCCACCATGCACCCAGCAGCCG...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCGGAGGGCTGGAGGCCTaGGTTTCACTCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSGGLEA*VSLTAR
Trigger: CCTGGCAGTGAGTGAAACCCAGGCCTCCAGCCCTCC...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp GAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCTGAAAGCGGGGGCCTaGCAGGATGAGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: EAAGKEGKRVFLEPGAGWLKAGA*QDEDGL
Trigger: CAGGCCATCCTCATCCTGCCAGGCCCCCGCTTTCAG...CCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp GGTATGAGAAGGCAGCCGAGTGTGCGGCGGCAGGGCAAGGTTGGCCTGGGCCGCTCTGAGTGGGAGCATTaGCACCACCCCACTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GMRRQPSVRRQGKVGLGRSEWEH*HHPTPE
Trigger: TTCAGGAGTGGGGTGGTGCCAATGCTCCCACTCAGA...GCGGCCCAGGCCAACCTTGCCCTGCCGCCGCACACTCGGCTGCCTTCTCATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCTGGGGGCCTGAGCCCTaGCTCCAGAGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGWGPEP*LQRPRA
Trigger: TGCTCTGGGCCTCTGGAGCCAGGGCTCAGGCCCCCA...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCTGGCGCCGCCTaGCCTCGCGTGGTACAAGCC +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPAAGAA*PRVVQA
Trigger: GGCTTGTACCACGCGAGGCCAGGCGGCGCCAGCAGC...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCGCGGCTGGTTCCTTTaGGATGCGGAGGTGCGACGG +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVRGWFL*DAEVRR
Trigger: CCGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCG...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCACACCTGGGAAGCATaGAACCCAGAAACAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVHTWEA*NPETSA
Trigger: GGCACTTGTTTCTGGGTTCCATGCTTCCCAGGTGTG...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CAA 72 bp CAGCATGCGGCCCACGAGGTCTGTGGTGGACACCCCTaGCGTGCGCTTGCATTCTCTGTACCTCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QHAAHEVCGGHP*RALAFSVPPSL
Trigger: CAGGCTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGTGTGCACGCCTACGATaGGGTAGTCACCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVCARLR*GSHPWP
Trigger: GGGCCATGGGTGACTACCTCATCGTAGGCGTGCACA...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp GCCTACGATGAGGTAGTCACCCATGGCCCGTGCCTGGCGCAGCTGGTTGGAGTGTGTGCACGCCTACGATaGGGTAGTCACCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: AYDEVVTHGPCLAQLVGVCARLR*GSHPWP
Trigger: GGGCCATGGGTGACTACCTCATCGTAGGCGTGCACA...CACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACCTCATCGTAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCATCTACAGTCAGGGTaGTGTCATTGCCGTGAACAC +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVHLQSG*CHCREH
Trigger: GTGTTCACGGCAATGACATCACCCTGACTGTAGATG...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCAGTGTAAGCCCGCGATaGTGTAGGGCCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESSVSPR*CRASLP
Trigger: TGGCAGAGAGGCCCTACATCATCGCGGGCTTACACT...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGACACCAGGTCCACCTTaGAGTGACTTAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLTPGPP*SDLGAL
Trigger: CAGAGCTCCTAAGTCACTTCAAGGTGGACCTGGTGT...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
CDS-3UTR TCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGATTTCTGTCTTGCCGTaGCACACCAGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLISVLP*HTRSTL
Trigger: CAAGGTGGACCTGGTGTGTCACGGCAAGACAGAAAT...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
CDS-3UTR TCA 90 bp AGGGTTCTGAGTGGGAGCATTGGCACCACCCCACTCCTGAAAGCGGGGGCCTGGTCCTGTGCTGGGTCGTaGGGTCGACCTCACAACAGC +
Preference number: 4 (lower is better)
Translates to: RVLSGSIGTTPLLKAGAWSCAGS*GRPHNS
Trigger: GCTGTTGTGAGGTCGACCTCACGACCCAGCACAGGA...CCAGGCCCCCGCTTTCAGGAGTGGGGTGGTGCCAATGCTCCCACTCAGAACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAATCTCAGCGCGGTGGCTaGACCGGAGAGGTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKSQRGG*TGEVGV
Trigger: CACGCCGACCTCTCCGGTGCAGCCACCGCGCTGAGA...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR GCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTACCGGGGGCCCCTTGTaGTTGGCGATCTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCATGGPL*LAISSR
Trigger: CCTAGAGGAGATCGCCAAGCACAAGGGGCCCCCGGT...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR GCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACCCCTTGCGTGCGCTTaGATTCTCTGTACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPPLACA*ILCTSQ
Trigger: CTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGG...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCCCCTTGCGTGCGCTTaGATTCTCTGTACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLPLACA*ILCTSQ
Trigger: CTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGG...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTGGACACCCCTTGCGTaGGCTTGCATTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLWTPLA*ACILCT
Trigger: GGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCA...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCCTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: RGPGGGARRSGAFQAAGALAKTV*ILPVLR
Trigger: TCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAG...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGGCTGCAGGTGCCGTCTaGCCGTCTCACTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTAAGAV*PSHFRP
Trigger: AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGC...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGGCTGCAGGTGCCGTCTaGCCGTCTCACTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKAAAGAV*PSHFRP
Trigger: AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGC...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAGCTGCAGGTGCCGTCTaGCCGTCTCACTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: EPGQLERAALQSPMSKRRAAGAV*PSHFRP
Trigger: AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGC...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCGTTTCAGGCTGCAGGTaGCGTCTGCCCGTCTCACTT +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESVSGCR*RLPVSL
Trigger: AAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAAC...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAGTTTCAGGCTGCAGGTaGCGTCTGCCCGTCTCACTT +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPVSGCR*RLPVSL
Trigger: AAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAAC...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCGCACGCAGGAGCGGTaGGTTTCAGGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKARTQER*VSGCRC
Trigger: GCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCG...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CAGCCGATTAGGTGGTGCCCACCTGGATTGAGGGTGGGTCTGCCTCTCCCAGCCCTCCCTAAAGCCCTCTaGTCTGCACCTCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: QPIRWCPPGLRVGLPLPALPKAL*SAPPAT
Trigger: TGTGGCGGGAGGTGCAGAGCAGAGGGCTTTAGGGAG...GGCTGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CGCCCCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAAAGCCTCATTTTGAATaGGGCGAGACCAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: RPKPAEVRAAPRRPRDLPKPHFE*GETRQS
Trigger: AGATTGCCTGGTCTCGCCGCATTCAAAATGAGGCTT...TGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGTCTGGCCTCCAATGCTaGTACGGGGCCAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQSGLQC*YGARPT
Trigger: GGTGGGCCTGGCCCCGTAGCAGCATTGGAGGCCAGA...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGGCTGGAGCCCCTGGCTaGCTTCCTCTTGCCCCCATC +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQAGAPG*LPLAPI
Trigger: GATGGGGGCAAGAGGAAGGCAGCCAGGGGCTCCAGC...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGGAAGGCAGCCGAGTGTaGGGCGGCAGGGCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGEGSRV*GGRARL
Trigger: CAACCTTGCCCTGCCGCCGCACACTCGGCTGCCTTC...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCGCGGGACCTACCAGTaGAAGGCGAACGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVRGTYQ*KANVFL
Trigger: CAGGAAGACGTTCGCCTTGCACTGGTAGGTCCCGCG...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCACGTCGCCCCAAACCTaGAGAGGTGCGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGTSPQT*RGASGS
Trigger: GGAGCCGCTCGCACCTCTGCAGGTTTGGGGCGACGT...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCGAAGCAGGGAGGCCGTaGCTCCAGATCTCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGEAGRP*LQISAR
Trigger: CCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTC...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCGGAGCCGGGCAAGCTaGTTGCTGGTGGTTACGGAG +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVRSRAS*LLVVTE
Trigger: CTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCG...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGGCTTGGGAGCCTCGCTaGCAGTGGTGGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQAWEPR*QWWGAG
Trigger: ACCTGCTCCCCACCACTGCCAGCGAGGCTCCCAAGC...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGGACGTAGGGAGCCGCTaGCACCACCTCGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKADVGSR*HHLVHP
Trigger: TGGGTGGACGAGGTGGTGCCAGCGGCTCCCTACGTC...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp GGCGGGTATCGGGTGAGGGGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCGACGTAGGGAGCCGCTaGCACCACCTCGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: GGYRVRGLAKTVCILPVLDVGSR*HHLVHP
Trigger: TGGGTGGACGAGGTGGTGCCAGCGGCTCCCTACGTC...GAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCGATACCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp CTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCCACGAGGTCTGTGGTaGACACCCCTTGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: LALQHQEYWGLPGGRLLGPRGLW*TPLACA
Trigger: AGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGG...CCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp GCAGCATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGCATTGATGTCTGCAGGAACTaGGATACCCCGGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AACGPRGLWWTPLACACIDVCRN*DTPVQG
Trigger: CCCCTGGACCGGGGTATCCCAGTTCCTGCAGACATC...AATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp TCCGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGTTGGCTTCCTTCTTCTaGTTTCGCGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: SGDQVGAHAGAVRFRLQVLASFF*FRASYS
Trigger: GGAGTATGAGGCGCGAAACCAGAAGAAGGAAGCCAA...CACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCCGCCACAGCTGGGTaGGCAGTCAGTGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGPATAG*AVSVAS
Trigger: AGAGGCCACACTGACTGCCCACCCAGCTGTGGCGGG...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTGTGCCCAGTGGGAGGTaGTGTGGTCTACACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPVPSGR*CGLHPE
Trigger: CTCTGGGTGTAGACCACACCACCTCCCACTGGGCAC...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGGCAGGACACCGTGTTaGGGGGTGCCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPGRTPC*GVPSGR
Trigger: CCTCCCACTGGGCACCCCCCAACACGGTGTCCTGCC...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGGAGCCAGGCGCTGGGTaGCAGGACACCGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKEPGAG*QDTVLG
Trigger: CCCCAACACGGTGTCCTGCCACCCAGCGCCTGGCTC...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
CDS-3UTR CCA 90 bp CTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGGCAAGCGTGTTTTCCTaGAGCCAGGCGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LALQHQEYWGLPGGRLLGASVFS*SQALGG
Trigger: GCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGC...CCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCTGGGCGCCCAGGCTTTGGAGGGCTaGAGGCCTGGGTTTCACTCA +
Preference number: 4 (lower is better)
Translates to: QHQEYWGLPGGRLLGLGAQALEG*RPGFHS
Trigger: TGAGTGAAACCCAGGCCTCCAGCCCTCCAAAGCCTG...GGCGCCCAGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp GGAGGGGCCAAGGGGCAAGGAGCCTCAGCTCTGGCTCTCCTCCTTATTCTAGCATGTGAGGGCATGGGCTaGAGCCCCTGGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GGAKGQGASALALLLILACEGMG*SPWLPS
Trigger: GGAAGGCAGCCAGGGGCTCCAGCCCATGCCCTCACA...TGCTAGAATAAGGAGGAGAGCCAGAGCTGAGGCTCCTTGCCCCTTGGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CGCCCCAAACCTGCAGAGGTGCGAGCGGCTCCCCGACGGCCGCGGGACCTACCAATGGACTCTGATGCCTaGAGCCAAGAATACCCCTTA +
Preference number: 4 (lower is better)
Translates to: RPKPAEVRAAPRRPRDLPMDSDA*SQEYPL
Trigger: TAAGGGGTATTCTTGGCTCCAGGCATCAGAGTCCAT...TGGTAGGTCCCGCGGCCGTCGGGGAGCCGCTCGCACCTCTGCAGGTTTGGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp AAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGGTGTGCACGCCTACGATaGGGTAGTCACCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: KASVFSWSQALGGRTPCWCARLR*GSHPWP
Trigger: GGGCCATGGGTGACTACCTCATCGTAGGCGTGCACA...CCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000538936.7
CDS-3UTR TCA 90 bp CATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGCATTCTCTATCTCTCCTCCTGAGTaGACACCGGGGGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: HAAHEVCGGHPLRALAFSISPPE*TPGAPC
Trigger: ACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGAT...AGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp CTGGCTCTCCAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGTTGTATCTCTCCTCCTaGGTGAACACCGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LALQHQEYWGLPGGRLLGLYLSS*VNTGGP
Trigger: GGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAA...CCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTGGAGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCATCTCCTGGCTGCTGTaGTGGGCTTTGGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLISWLL*WALVTS
Trigger: GCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGAT...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGAGTGTAAGCCCGCGATaGTGTAGGGCCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVSVSPR*CRASLP
Trigger: TGGCAGAGAGGCCCTACATCATCGCGGGCTTACACT...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTTTAGGAGCTCTGCTGTaGCCGCGTACGGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCALGALL*PRTGLQ
Trigger: TTGGAGCCCCGTACGCGGTCACAGCAGAGCTCCTAA...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTGCTGGACACCCTCTCTaGGCAGCTTTGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPAGHPL*AALLER
Trigger: TCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGC...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTAGAGAACTAAAGGGGTaGCCGCAGTCACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPRELKG*PQSLLP
Trigger: AGGGAGCAGTGACTGCGGTCACCCCTTTAGTTCTCT...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CAGCCGATTAGGTGGTGCCCACCTGGATTGAGGGTGGGTCTGCCTCTCCCAGCCCGAGAGTCCAAAAGCTaGAGAACCTGGAGGCCGACG +
Preference number: 4 (lower is better)
Translates to: QPIRWCPPGLRVGLPLPARESKS*RTWRPT
Trigger: CGTCGGCCTCCAGGTTCTTCAGCTTTTGGACTCTCG...GGCTGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp GGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGCCGGGCAAGCTGGTTaGTGGTGGTTACGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GRQACFPGARRWVAGHRVAGQAG*WWLRRS
Trigger: GCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGC...AACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR GCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTCCCCTTGCGTGCGCTTaGATTCTCTGTACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPPLACA*ILCTSQ
Trigger: CTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGG...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCATGGACACCCCTTGCGTaGGCTTGCATTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPWTPLA*ACILCT
Trigger: GGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCA...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGGGTTCTGAGTGGGAGCATTGGCACCACCCCACTCCTGAAAGCGGGGGCCTGGGTGGTGGACACCCCTTaGGTGCGCTTGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: RVLSGSIGTTPLLKAGAWVVDTP*VRLHSL
Trigger: CAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCAC...CCAGGCCCCCGCTTTCAGGAGTGGGGTGGTGCCAATGCTCCCACTCAGAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCTGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVWLPAA*GPRGLW
Trigger: CCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCA...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp TGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTGAGGTCGCAATCTGACGGAAGATaGCCCTTCTCTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: WRASRAPRLQLLCWVVRSQSDGR*PFSWAP
Trigger: AGGAGCCCAAGAGAAGGGGCATCTTCCGTCAGATTG...CGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGGGCTGTGCCGCCTGCTaGCTGGCAGCCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQGCAAC*LAASRK
Trigger: CTTCCTGGAGGCTGCCAGGCAGCAGGCGGCACAGCC...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAGCTGCAGGTGCCGTCTaGCCGTCTCACTTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKAAGAV*PSHFRP
Trigger: AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGC...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGGTTTCAGGCTGCAGGTaGCGTCTGCCCGTCTCACTT +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVVSGCR*RLPVSL
Trigger: AAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAAC...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCACGCAGGAGCGGTaGGTTTCAGGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKRTQER*VSGCRC
Trigger: GCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCG...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTCTCCCTAAAGCCCTCTaGTCTGCACCTCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCALPKAL*SAPPAT
Trigger: TGTGGCGGGAGGTGCAGAGCAGAGGGCTTTAGGGAG...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTGGTGACCGCAGTCACTaGTCCCTAAAGCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPGDRSH*SLKPSA
Trigger: AGCAGAGGGCTTTAGGGAGCAGTGACTGCGGTCACC...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGGGTGACCGCAGTCACTaGTCCCTAAAGCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVGDRSH*SLKPSA
Trigger: AGCAGAGGGCTTTAGGGAGCAGTGACTGCGGTCACC...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGTATTCTAGCATCGCCTaGTACAGGGGGTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVYSSIA*YRGWPQ
Trigger: CTGGGGCCACCCCCTGTAGCAGGCGATGCTAGAATA...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TTCCCCAGTGGGCATGAAAGAAATGAGGGCCCCACAAGCCACATGGACTCTGATCTCCCCTGCTGCCACTaGGGCCCACGCAAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: FPSGHERNEGPTSHMDSDLPCCH*GPRKPG
Trigger: GCCCGGCTTGCGTGGGCCGCAGTGGCAGCAGGGGAG...ATCAGAGTCCATGTGGCTTGTGGGGCCCTCATTTCTTTCATGCCCACTGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACAGATCTCAGCGCGGTaGCTGCACCGGAGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKQISAR*LHRRGR
Trigger: CCGACCTCTCCGGTGCAGCCACCGCGCTGAGATCTG...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAGAAGCAGGGAGGCCGTaGCTCCAGATCTCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKEAGRP*LQISAR
Trigger: CCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTC...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAAGCTGGTTGCTGGTaGTTACGGAGAAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLQAGCW*LRRSRE
Trigger: CTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTG...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp TGCTGTGATGGGCTTTGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTGGTGGCGGAGCCGGGCAAGCTaGTTGCTGGTGGTTACGGAG +
Preference number: 4 (lower is better)
Translates to: CCDGLWLPAACGPRGLWWRSRAS*LLVVTE
Trigger: CTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCG...CCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp CATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGCATTCTCTCCTGGCGCAGCTGGTTaGAGTGGCCGTAATGCACCA +
Preference number: 4 (lower is better)
Translates to: HAAHEVCGGHPLRALAFSPGAAG*SGRNAP
Trigger: TGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGG...AGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp CATAAGGAGAGTGGCGAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGCCCATGGCCCGTGCCTaGCGCAGCTGGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: HKESGEAAGKEGKRVFLEPMARA*RSWLEW
Trigger: CCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGG...CTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTCGCCACTCTCCTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGACGTAGGGAGCCGCTaGCACCACCTCGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPDVGSR*HHLVHP
Trigger: TGGGTGGACGAGGTGGTGCCAGCGGCTCCCTACGTC...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCCACGAGGTCTGTGGTaGACACCCCTTGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGPRGLW*TPLACA
Trigger: AGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGG...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCCACGAGGTCTGTGGTaGACACCCCTTGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKAPRGLW*TPLACA
Trigger: AGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGG...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGGCCCACGAGGTCTGTaGTGGACACCCCTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPGPRGL*WTPLAC
Trigger: GCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCC...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCATGCTGTGATGGGCTTTaGTTACCAGCAGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPCCDGL*LPAACG
Trigger: GCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCGATGTCTGCAGGAACTaGGATACCCCGGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVDVCRN*DTPVQG
Trigger: CCCCTGGACCGGGGTATCCCAGTTCCTGCAGACATC...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAGATGCCCCTTCTCTTaGGCTCCTGGTATGGGTCGG +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSRCPFS*APGMGR
Trigger: CCGACCCATACCAGGAGCCCAAGAGAAGGGGCATCT...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGTTGGCTTCCTTCTTCTaGTTTCGCGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLLASFF*FRASYS
Trigger: GGAGTATGAGGCGCGAAACCAGAAGAAGGAAGCCAA...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCATCTGAGCAGCTTTGCTaGAAAGAGCGGAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPSEQLC*KERRAC
Trigger: GCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGA...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTCCCGCCACAGCTGGGTaGGCAGTCAGTGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPPATAG*AVSVAS
Trigger: AGAGGCCACACTGACTGCCCACCCAGCTGTGGCGGG...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAACCTCCCGCCACAGCTaGGTGGGCAGTCAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKTSRHS*VGSQCG
Trigger: GCCACACTGACTGCCCACCCAGCTGTGGCGGGAGGT...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGGAGCCAGGCGCTGGGTaGCAGGACACCGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQEPGAG*QDTVLG
Trigger: CCCCAACACGGTGTCCTGCCACCCAGCGCCTGGCTC...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
CDS-3UTR CCA 90 bp AAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGGGCCGTGACAGGGGTGTaGGAGACAGAGATCCCATGG +
Preference number: 4 (lower is better)
Translates to: KASVFSWSQALGGRTPCWAVTGV*ETEIPW
Trigger: CCATGGGATCTCTGTCTCCCACACCCCTGTCACGGC...CCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACAGAGGACAGGCCCATaGGGTGCCACATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKQRTGP*GATWAR
Trigger: CCTGGCCCATGTGGCACCCCATGGGCCTGTCCTCTG...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGTGCCTTCCTGGGCTGTaGAGAGCCTCGCGTGCACCT +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGECLPGL*RASRAP
Trigger: AGGTGCACGCGAGGCTCTCCACAGCCCAGGAAGGCA...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGGGTTCTGAGTGGGAGCATTGGCACCACCCCACTCCTGAAAGCGGGGGCCTGGACTCCGGAACTGGCTTaGGCTCTGGCCTCCAATGCT +
Preference number: 4 (lower is better)
Translates to: RVLSGSIGTTPLLKAGAWTPELA*ALASNA
Trigger: AGCATTGGAGGCCAGAGCCCAAGCCAGTTCCGGAGT...CCAGGCCCCCGCTTTCAGGAGTGGGGTGGTGCCAATGCTCCCACTCAGAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAAGCCTTGGTGCTCCCTaGGGGAAGTGCAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKSLGAP*GKCRAT
Trigger: CGTGGCCCTGCACTTCCCCCAGGGAGCACCAAGGCT...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TTCCCCAGTGGGCATGAAAGAAATGAGGGCCCCACAAGCCACATGGACTCTGATCCCTCCGGCGCGGGATaGCGCCCCAGGTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: FPSGHERNEGPTSHMDSDPSGAG*RPRSPL
Trigger: TAGGGGAGACCTGGGGCGCCATCCCGCGCCGGAGGG...ATCAGAGTCCATGTGGCTTGTGGGGCCCTCATTTCTTTCATGCCCACTGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCCCCTGGCAAGCCACTaGTGTAGGTCCGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVPLASH*CRSESP
Trigger: TGGACTCTCGGACCTACACCAGTGGCTTGCCAGGGG...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGGGCAGAGATTCCTTCTaGCGAGCAGGTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGGRDSF*RAGAQP
Trigger: GGGCTGAGCACCTGCTCGTCAGAAGGAATCTCTGCC...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR TCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGTTGTATCTCTCCTCCTaGGTGAACACCGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQLYLSS*VNTGGP
Trigger: GGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAA...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGATCTCCTGGCTGCTGTaGTGGGCTTTGGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVISWLL*WALVTS
Trigger: GCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGAT...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCAGAAGCAAACTGGATaGTCTTCTGAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCQKQTG*SSEMSA
Trigger: TGCAGACATCTCAGAAGATCATCCAGTTTGCTTCTG...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGCACCAGCCACATAGATaGCTGTCTCCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQHQPHR*LSPLAG
Trigger: CCCAGCCAGGGGAGACAGTCATCTATGTGGCTGGTG...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCACCAGCCACATAGATaGCTGTCTCCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGHQPHR*LSPLAG
Trigger: CCCAGCCAGGGGAGACAGTCATCTATGTGGCTGGTG...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGCATTCTCTAGTGTAAGCCCGCGATaGTGTAGGGCCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HAAHEVCGGHPLRALAFSSVSPR*CRASLP
Trigger: TGGCAGAGAGGCCCTACATCATCGCGGGCTTACACT...AGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGTTAGGAGCTCTGCTGTaGCCGCGTACGGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKALGALL*PRTGLQ
Trigger: TTGGAGCCCCGTACGCGGTCACAGCAGAGCTCCTAA...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCATTTCTGTCTTGCCGTaGCACACCAGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESISVLP*HTRSTL
Trigger: CAAGGTGGACCTGGTGTGTCACGGCAAGACAGAAAT...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp AACAGCAGAGGACAGGCCCATGGGGTGCCACATGGGCCAGGTGCTGTAGGGCAGCTGCCACTGTCAATCTaGCGGAAGATGCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NSRGQAHGVPHGPGAVGQLPLSI*RKMPLL
Trigger: GAGAAGGGGCATCTTCCGTCAGATTGACAGTGGCAG...CTGCCCTACAGCACCTGGCCCATGTGGCACCCCATGGGCCTGTCCTCTGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTGCCACTGTCAATCTaGCGGAAGATGCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVLPLSI*RKMPLL
Trigger: GAGAAGGGGCATCTTCCGTCAGATTGACAGTGGCAG...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTAGAGAACTAAAGGGGTaGCCGCAGTCACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPRELKG*PQSLLP
Trigger: AGGGAGCAGTGACTGCGGTCACCCCTTTAGTTCTCT...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACCCCAAGCCTGGGTATaGGAAGGCAGCCGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKPQAWV*EGSRVC
Trigger: GCACACTCGGCTGCCTTCTCATACCCAGGCTTGGGG...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp AAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGGACCCAAGAGAAGACATaGCCAGGACCTTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KASVFSWSQALGGRTPCWTQEKT*PGPWGS
Trigger: GCTCCCCCAAGGTCCTGGTCATGTCTTCTCTTGGGT...CCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp GAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCCTCTCCCAGCCCACTaGCTCAAATGGGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: EAAGKEGKRVFLEPGAGWPLPAH*LKWESP
Trigger: AGGAGATTCCCATTTGAGTCAGTGGGCTGGGAGAGG...CCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCTGGGAGCAGCCTTCTaGGGAAAGTATGTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGLGAAF*GKYVPG
Trigger: GCCGGGGACATACTTTCCTCAGAAGGCTGCTCCCAG...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538721.6
CDS-3UTR TCA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTTCTCTTGGGCTCCTTaGAGTGACTTAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLFSWAP*SDLGAL
Trigger: CAGAGCTCCTAAGTCACTTCAAGGAGCCCAAGAGAA...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571105.5
CDS-3UTR GCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQVTHGP*LAQLVG
Trigger: TCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGAC...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CGGGTGAGGGGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACATGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RVRGLAKTVCILPVLRGHVTHGP*LAQLVG
Trigger: TCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGAC...ATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp CTTTGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGCCCCTTGCGTGCGCTTaGATTCTCTGTACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LWLPAACGPRGLWWTPLAPLACA*ILCTSQ
Trigger: CTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGG...CGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp GCCTACGATGAGGTAGTCACCCATGGCCCGTGCCTGGCGCAGCTGGTTGGAGTGTGGACACCCCTTGCGTaGGCTTGCATTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: AYDEVVTHGPCLAQLVGVWTPLA*ACILCT
Trigger: GGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCA...CACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACCTCATCGTAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp GGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGTGGTGGACACCCCTTaGGTGCGCTTGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: GRQACFPGARRWVAGHRVVVDTP*VRLHSL
Trigger: CAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCAC...AACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000538936.7
CDS-3UTR GCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCTGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGWLPAA*GPRGLW
Trigger: CCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCA...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GGACATCTCCTGGCTGCTGTGATGGGCTTTGGTTACCAGCAGCATGCGGCCCACTGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GHLLAAVMGFGYQQHAAHWLPAA*GPRGLW
Trigger: CCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCA...GTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGATGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCGCCCACCAGGGCACTTaGCAAAACTGTCTGCATACT +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESAHQGT*QNCLHT
Trigger: AGTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGC...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCTCCAGGAAGTCCACATaGCCGATGTGGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSSRKST*PMWNRS
Trigger: CGACCTGTTCCACATCGGGCATGTGGACTTCCTGGA...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTTCCAGGAAGTCCACATaGCCGATGTGGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPSRKST*PMWNRS
Trigger: CGACCTGTTCCACATCGGGCATGTGGACTTCCTGGA...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp GGTAGTCACCCATGGCCCGTGCCTGGCGCAGCTGGTTGGAGTGGCCGTAATGCATCCAGGAAGTCCACATaGCCGATGTGGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: GSHPWPVPGAAGWSGRNASRKST*PMWNRS
Trigger: CGACCTGTTCCACATCGGGCATGTGGACTTCCTGGA...TGCATTACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCCAATCTGACGGAAGATaGCCCTTCTCTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESQSDGR*PFSWAP
Trigger: AGGAGCCCAAGAGAAGGGGCATCTTCCGTCAGATTG...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTAAAGAGCGGAGAGCCTaGTGCAAACCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPKERRA*CKPGTL
Trigger: CAAGGTGCCTGGTTTGCAGCAGGCTCTCCGCTCTTT...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTGTTTCAGGCTGCAGGTaGCGTCTGCCCGTCTCACTT +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAVSGCR*RLPVSL
Trigger: AAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAAC...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGACCGGGGGCCCCTTGTaGTTGGCGATCTCCTCATCG +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKTGGPL*LAISSS
Trigger: CGATGAGGAGATCGCCAAGCACAAGGGGCCCCCGGT...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTGGCGCAGCTGGTTGGAGTGGCCGTAATGCACCATGTCATAGCTACAGGGACGACCGGGGGCCCCTTGTaGTTGGCGATCTCCTCATCG +
Preference number: 4 (lower is better)
Translates to: LAQLVGVAVMHHVIATGTTGGPL*LAISSS
Trigger: CGATGAGGAGATCGCCAAGCACAAGGGGCCCCCGGT...CGTCCCTGTAGCTATGACATGGTGCATTACGGCCACTCCAACCAGCTGCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGCTGGTTCCTTTGGGATaGGGAGGTGCGACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQLVPLG*GGATAP
Trigger: AGGAGCCGTCGCACCTCCGCATCCCAAAGGAACCAG...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CTCCCACCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTCGCCCGCGCGGCTGGCCAGTGACAATACTTTaGATCCTTCAATCCAGTCAA +
Preference number: 4 (lower is better)
Translates to: LPPSARSLRASSARPRGWPVTIL*ILQSSQ
Trigger: TTGACTGGATTGAAGGATGCAAAGTATTGTCACTGG...CCAGCCGCGCGGGCGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp TCGGGTGAGGGGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACAGAAGCAGGGAGGCCGTaGCTCCAGATCTCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: SGEGACQNCLHTPGTQRTEAGRP*LQISAR
Trigger: CCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTC...TGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp TGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACATCTCCTGGCTGCTGTGGCCAGGGGAACCCCTaGACCGGAGCCGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: CQNCLHTPGTQRTSPGCCGQGNP*TGAGQA
Trigger: AGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCC...ACAGCAGCCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp GGAGGGGCCAAGGGGCAAGGAGCCTCAGCTCTGGCTCTCCTCCTTATTCTAGCACCTGGCGCAGCTGGTTaGAGTGGCCGTAATGCACCA +
Preference number: 4 (lower is better)
Translates to: GGAKGQGASALALLLILAPGAAG*SGRNAP
Trigger: TGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGG...TGCTAGAATAAGGAGGAGAGCCAGAGCTGAGGCTCCTTGCCCCTTGGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGATGCTGGCCAACTGGGTaGCTCTCTTCCCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRCWPTG*LSSLRG
Trigger: CCCTCGCAGGGAAGAGAGCCACCCAGTTGGCCAGCA...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGGGCCCACGAGGTCTGTaGTGGACACCCCTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQGPRGL*WTPLAC
Trigger: GCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCC...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGTGCTGTGATGGGCTTTaGTTACCAGCAGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVCCDGL*LPAACG
Trigger: GCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGGATGTCTGCAGGAACTaGGATACCCCGGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQDVCRN*DTPVQG
Trigger: CCCCTGGACCGGGGTATCCCAGTTCCTGCAGACATC...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGGATGTCTGCAGGAACTaGGATACCCCGGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTDVCRN*DTPVQG
Trigger: CCCCTGGACCGGGGTATCCCAGTTCCTGCAGACATC...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCGATGTCTGCAGGAACTaGGATACCCCGGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGDVCRN*DTPVQG
Trigger: CCCCTGGACCGGGGTATCCCAGTTCCTGCAGACATC...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCTCCACATGCCCGATGTaGAACAGGTCGAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSSTCPM*NRSKAP
Trigger: TGGTGCCTTCGACCTGTTCCACATCGGGCATGTGGA...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp GGTAGTCACCCATGGCCCGTGCCTGGCGCAGCTGGTTGGAGTGGCCGTAATGCATCCACATGCCCGATGTaGAACAGGTCGAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: GSHPWPVPGAAGWSGRNASTCPM*NRSKAP
Trigger: TGGTGCCTTCGACCTGTTCCACATCGGGCATGTGGA...TGCATTACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGCTTGGGCTCCTGGTATaGGTCGGAGCCATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGELGLLV*VGAIPV
Trigger: GACAGGGATGGCTCCGACCCATACCAGGAGCCCAAG...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCTTGGGCTCCTGGTATaGGTCGGAGCCATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGLGLLV*VGAIPV
Trigger: GACAGGGATGGCTCCGACCCATACCAGGAGCCCAAG...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp CAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCTGGGCGCCTTGGTGATGATCCGCTaGACGATGAGGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: QHQEYWGLPGGRLLGLGALVMIR*TMRSVV
Trigger: CACCACAGACCTCATCGTCCAGCGGATCATCACCAA...GGCGCCCAGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGGCCTCTCCACTGTGCTaGACACCCTCTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQASPLC*TPSLSS
Trigger: GCTGCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGC...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGCCTCTCCACTGTGCTaGACACCCTCTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGEASPLC*TPSLSS
Trigger: GCTGCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGC...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAGTGGGAGGTGGTGTaGTCTACACCCAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLQWEVV*STPREL
Trigger: TAGTTCTCTGGGTGTAGACCACACCACCTCCCACTG...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGGTGCCCAGTGGGAGGTaGTGTGGTCTACACCCAGAG +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQVPSGR*CGLHPE
Trigger: CTCTGGGTGTAGACCACACCACCTCCCACTGGGCAC...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGGGGGCCCCTTGTGCTTaGCGATCTCCTCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGGAPCA*RSPHRC
Trigger: ACACCGATGAGGAGATCGCCAAGCACAAGGGGCCCC...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCGGGGCCCCTTGTGCTTaGCGATCTCCTCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGGAPCA*RSPHRC
Trigger: ACACCGATGAGGAGATCGCCAAGCACAAGGGGCCCC...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGGGGGCCCCTTGTGCTTaGCGATCTCCTCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQGAPCA*RSPHRC
Trigger: ACACCGATGAGGAGATCGCCAAGCACAAGGGGCCCC...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACCATGGGGTGCCACATaGGCCAGGTGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKPWGAT*ARCCRA
Trigger: TGCCCTACAGCACCTGGCCCATGTGGCACCCCATGG...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp GGAGGGGCCAAGGGGCAAGGAGCCTCAGCTCTGGCTCTCCTCCTTATTCTAGCAGTCCAGGGTTCTGAGTaGGAGCATTGGCACCACCCC +
Preference number: 4 (lower is better)
Translates to: GGAKGQGASALALLLILAVQGSE*EHWHHP
Trigger: GGGGTGGTGCCAATGCTCCCACTCAGAACCCTGGAC...TGCTAGAATAAGGAGGAGAGCCAGAGCTGAGGCTCCTTGCCCCTTGGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGCAGCCTTCATCCTGTaGCCAAAGGCTGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGEAAFIL*PKAAEP
Trigger: GGGCTCTGCAGCCTTTGGCCACAGGATGAAGGCTGC...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTATCTCTCCTCCTGAGTaGACACCGGGGGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPISPPE*TPGAPC
Trigger: ACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGAT...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAATCTCTCCTCCTGAGTaGACACCGGGGGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKISPPE*TPGAPC
Trigger: ACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGAT...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGAGTGTAAGCCCGCGATaGTGTAGGGCCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGSVSPR*CRASLP
Trigger: TGGCAGAGAGGCCCTACATCATCGCGGGCTTACACT...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAGTGTAAGCCCGCGATaGTGTAGGGCCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQSVSPR*CRASLP
Trigger: TGGCAGAGAGGCCCTACATCATCGCGGGCTTACACT...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGATCCAATCACCACTTCTaGCACGTACCGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EPGQLERAALQSPMSKRRSNHHF*HVPAGQ
Trigger: CTGGCCTGCCGGTACGTGTCAGAAGTGGTGATTGGA...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAATTAGGAGCTCTGCTGTaGCCGCGTACGGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKLGALL*PRTGLQ
Trigger: TTGGAGCCCCGTACGCGGTCACAGCAGAGCTCCTAA...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGAGGTCCACCTTGAAGTaGCTTAGGAGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVRSTLK*LRSSAV
Trigger: CACAGCAGAGCTCCTAAGTCACTTCAAGGTGGACCT...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
CDS-3UTR TCA 90 bp TCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTAGGTCCACCTTGAAGTaGCTTAGGAGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPALPEPGQLERAALQSPRSTLK*LRSSAV
Trigger: CACAGCAGAGCTCCTAAGTCACTTCAAGGTGGACCT...AGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTCTGCCACTGTCAATCTaGCGGAAGATGCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCALPLSI*RKMPLL
Trigger: GAGAAGGGGCATCTTCCGTCAGATTGACAGTGGCAG...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp GGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTAGAGAACTAAAGGGGTaGCCGCAGTCACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GRQACFPGARRWVAGHRVRELKG*PQSLLP
Trigger: AGGGAGCAGTGACTGCGGTCACCCCTTTAGTTCTCT...AACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000538936.7
CDS-3UTR TCA 90 bp GCCTCTCCCAGCCCACTGACTCAAATGGGAATCTCCTCTGGCAACACCCTCACACGAGAGCCAAATCTGTaGGGGCATGGGCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ASPSPLTQMGISSGNTLTREPNL*GHGLEP
Trigger: GGGCTCCAGCCCATGCCCTCACAGATTTGGCTCTCG...TGTGAGGGTGTTGCCAGAGGAGATTCCCATTTGAGTCAGTGGGCTGGGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp GGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTAAGCCATGTGCAAGGTaGGGAGCAAGGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GRQACFPGARRWVAGHRVKPCAR*GARKPV
Trigger: GACTGGCTTCCTTGCTCCTCACCTTGCACATGGCTT...AACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCCCTTGCGTGCGCTTaGATTCTCTGTACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGPLACA*ILCTSQ
Trigger: CTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGG...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCCCCTTGCGTGCGCTTaGATTCTCTGTACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKAPLACA*ILCTSQ
Trigger: CTGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGG...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGGTGGTGGACACCCCTTaGGTGCGCTTGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQVVDTP*VRLHSL
Trigger: CAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCAC...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGGTGGTGGACACCCCTTaGGTGCGCTTGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGVVDTP*VRLHSL
Trigger: CAGAGAATGCAAGCGCACGCAAGGGGTGTCCACCAC...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAATGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKWLPAA*GPRGLW
Trigger: CCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCA...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTAGGACATCTCCTGGCTaGTGTGATGGGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPRTSPG*CDGLWL
Trigger: TAACCAAAGCCCATCACAGCAGCCAGGAGATGTCCT...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCAGGACATCTCCTGGCTaGTGTGATGGGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESRTSPG*CDGLWL
Trigger: TAACCAAAGCCCATCACAGCAGCCAGGAGATGTCCT...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCTCCAGGAAGTCCACATaGCCGATGTGGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVSRKST*PMWNRS
Trigger: CGACCTGTTCCACATCGGGCATGTGGACTTCCTGGA...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGGATGTAGGGCCTCTCTaGCAGCCTGTGCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQDVGPL*QPVHLL
Trigger: GAGAAGGTGCACAGGCTGGCAGAGAGGCCCTACATC...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGGATGTAGGGCCTCTCTaGCAGCCTGTGCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTDVGPL*QPVHLL
Trigger: GAGAAGGTGCACAGGCTGGCAGAGAGGCCCTACATC...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGGATGTAGGGCCTCTCTaGCAGCCTGTGCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQDVGPL*QPVHLL
Trigger: GAGAAGGTGCACAGGCTGGCAGAGAGGCCCTACATC...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCAAAGAGCGGAGAGCCTaGTGCAAACCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVKERRA*CKPGTL
Trigger: CAAGGTGCCTGGTTTGCAGCAGGCTCTCCGCTCTTT...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCGTTTCAGGCTGCAGGTaGCGTCTGCCCGTCTCACTT +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGVSGCR*RLPVSL
Trigger: AAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAAC...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGGGTGACCGCAGTCACTaGTCCCTAAAGCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQGDRSH*SLKPSA
Trigger: AGCAGAGGGCTTTAGGGAGCAGTGACTGCGGTCACC...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAAGCCCCGCGCAGCACTaGCACCAGGCTTTATTCGGT +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKSPAQH*HQALFG
Trigger: ACCGAATAAAGCCTGGTGGCAGTGCTGCGCGGGGCT...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp GTAATGCACCATGTCATAGCTACAGGGACGCTCGCCCGGAGGCCAGGGGAACCCCAAGCTGGTTGCTGGTaGTTACGGAGAAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VMHHVIATGTLARRPGEPQAGCW*LRRSRE
Trigger: CTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTG...GGGTTCCCCTGGCCTCCGGGCGAGCGTCCCTGTAGCTATGACATGGTGCATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGGGGCAAGCTGGTTGCTaGTGGTTACGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQGQAGC*WLRRSR
Trigger: CCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCC...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGGGGCAAGCTGGTTGCTaGTGGTTACGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTGQAGC*WLRRSR
Trigger: CCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCC...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACCTGGCGCAGCTGGTTaGAGTGGCCGTAATGCACCA +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKPGAAG*SGRNAP
Trigger: TGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGG...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAACACAAGAGGGCCGGTaGGGGCAGGCTGTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRTQEGR*GQAVSL
Trigger: TAGAGAGACAGCCTGCCCCCACCGGCCCTCTTGTGT...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCTTGGGCTCCTGGTATaGGTCGGAGCCATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKLGLLV*VGAIPV
Trigger: GACAGGGATGGCTCCGACCCATACCAGGAGCCCAAG...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGCTTCTCTTGGGCTCCTaGTATGGGTCGGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQLLLGS*YGSEPS
Trigger: GGATGGCTCCGACCCATACCAGGAGCCCAAGAGAAG...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCTTCTCTTGGGCTCCTaGTATGGGTCGGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKALLLGS*YGSEPS
Trigger: GGATGGCTCCGACCCATACCAGGAGCCCAAGAGAAG...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCTTCTCTTGGGCTCCTaGTATGGGTCGGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGLLLGS*YGSEPS
Trigger: GGATGGCTCCGACCCATACCAGGAGCCCAAGAGAAG...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCTTCTCTTGGGCTCCTaGTATGGGTCGGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGLLLGS*YGSEPS
Trigger: GGATGGCTCCGACCCATACCAGGAGCCCAAGAGAAG...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAGATGCCCCTTCTCTTaGGCTCCTGGTATGGGTCGG +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQRCPFS*APGMGR
Trigger: CCGACCCATACCAGGAGCCCAAGAGAAGGGGCATCT...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGATGCCCCTTCTCTTaGGCTCCTGGTATGGGTCGG +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQRCPFS*APGMGR
Trigger: CCGACCCATACCAGGAGCCCAAGAGAAGGGGCATCT...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCCTCTCCACTGTGCTaGACACCCTCTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPASPLC*TPSLSS
Trigger: GCTGCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGC...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAGTGCCCAGTGGGAGGTaGTGTGGTCTACACCCAGAG +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRVPSGR*CGLHPE
Trigger: CTCTGGGTGTAGACCACACCACCTCCCACTGGGCAC...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGGAGACAGAGATCCCATaGCCCCTGGAGGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQETEIP*PLEGPR
Trigger: CCTTGGCCCCTCCAGGGGCCATGGGATCTCTGTCTC...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGACTATGGGGAACTGGCTaGTCCCTCTGCTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRLWGTG*SLCSGD
Trigger: GTCCCCTGAGCAGAGGGACCAGCCAGTTCCCCATAG...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGAACTGGCTTGGGCTCTaGCCTCCAATGCTGCTACGG +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKANWLGL*PPMLLR
Trigger: CCGTAGCAGCATTGGAGGCCAGAGCCCAAGCCAGTT...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGATCTCTCCTCCTGAGTaGACACCGGGGGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQISPPE*TPGAPC
Trigger: ACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGAT...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGACCTCGTCCACCCATTTaGTGGCCTGCACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: EPGQLERAALQSPMSKRRPRPPI*WPAPSC
Trigger: ACAAGATGGTGCAGGCCATCAAATGGGTGGACGAGG...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCCTCGTCCACCCATTTaGTGGCCTGCACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGPRPPI*WPAPSC
Trigger: ACAAGATGGTGCAGGCCATCAAATGGGTGGACGAGG...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGATCTCCTGGCTGCTGTaGTGGGCTTTGGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTISWLL*WALVTS
Trigger: GCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGAT...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp GCCTCTCCCAGCCCACTGACTCAAATGGGAATCTCCTCTGGCAACACCCTCACACACCAGCCACATAGATaGCTGTCTCCCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASPSPLTQMGISSGNTLTHQPHR*LSPLAG
Trigger: CCCAGCCAGGGGAGACAGTCATCTATGTGGCTGGTG...TGTGAGGGTGTTGCCAGAGGAGATTCCCATTTGAGTCAGTGGGCTGGGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGTGTAAGCCCGCGATaGTGTAGGGCCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRSVSPR*CRASLP
Trigger: TGGCAGAGAGGCCCTACATCATCGCGGGCTTACACT...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTCCCCTTGTAGTGATTaGCCTCCTGGTCAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESSPCSD*PPGQSV
Trigger: TACACTTTGACCAGGAGGTCAATCACTACAAGGGGA...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTTCCCCTTGTAGTGATTaGCCTCCTGGTCAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPSPCSD*PPGQSV
Trigger: TACACTTTGACCAGGAGGTCAATCACTACAAGGGGA...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCATCCCCTTGTAGTGATTaGCCTCCTGGTCAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPSPCSD*PPGQSV
Trigger: TACACTTTGACCAGGAGGTCAATCACTACAAGGGGA...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCTGGGCGCCGTTCATGCAGATTCATaGTGGGGTAGTTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QHQEYWGLPGGRLLGLGAVHADS*WGSSSP
Trigger: AGGGGAAGAACTACCCCATCATGAATCTGCATGAAC...GGCGCCCAGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCGTTCATGCAGATTCATaGTGGGGTAGTTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLVHADS*WGSSSP
Trigger: AGGGGAAGAACTACCCCATCATGAATCTGCATGAAC...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTTCCAATCACCACTTCTaGCACGTACCGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPSNHHF*HVPAGQ
Trigger: CTGGCCTGCCGGTACGTGTCAGAAGTGGTGATTGGA...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCCTGCCACTGTCAATCTaGCGGAAGATGCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGLPLSI*RKMPLL
Trigger: GAGAAGGGGCATCTTCCGTCAGATTGACAGTGGCAG...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGGCTGGACACCCTCTCTaGGCAGCTTTGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQAGHPL*AALLER
Trigger: TCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGC...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAGCTGGACACCCTCTCTaGGCAGCTTTGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: EPGQLERAALQSPMSKRRAGHPL*AALLER
Trigger: TCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGC...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGAGAGAACTAAAGGGGTaGCCGCAGTCACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGERELKG*PQSLLP
Trigger: AGGGAGCAGTGACTGCGGTCACCCCTTTAGTTCTCT...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGGGGGAGCATGAAATGGTaGGGGCACAGTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: KASVFSWSQALGGRTPCWGSMKW*GHSELE
Trigger: TTCAAGCTCACTGTGCCCTCACCATTTCATGCTCCC...CCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAGACCTTGGGGGAGCATaGAATGGTGAGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRDLGGA*NGEGTV
Trigger: CACTGTGCCCTCACCATTTCATGCTCCCCCAAGGTC...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp GCTGGCACCACCTCGTCCACCCATTTGATGGCCTGCACCATCTTGTATCTCTCCCTGGGAGCAGCCTTCTaGGGAAAGTATGTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGTTSSTHLMACTILYLSLGAAF*GKYVPG
Trigger: GCCGGGGACATACTTTCCTCAGAAGGCTGCTCCCAG...GGAGAGATACAAGATGGTGCAGGCCATCAAATGGGTGGACGAGGTGGTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGGTGGTGGGGAGCAGGTaGCCCTTCTCTTTAGCATCG +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKVVGSR*PFSLAS
Trigger: CGATGCTAAAGAGAAGGGGCACCTGCTCCCCACCAC...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR GCA 90 bp CGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAACCCATTTGATGGCCTaGACCATCTTGTATCTCTCC +
Preference number: 4 (lower is better)
Translates to: RCVSGCRCRLPVSLPASPTHLMA*TILYLS
Trigger: GGAGAGATACAAGATGGTGCAGGCCATCAAATGGGT...TGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GAGTGGCGAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCAGGACATCTCCTGGCTaGTGTGATGGGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: EWRSCREGRQACFPGARRRTSPG*CDGLWL
Trigger: TAACCAAAGCCCATCACAGCAGCCAGGAGATGTCCT...GCGCCTGGCTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTCGCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCCTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: LTSPSRARPVREGGPAESLAKTV*ILPVLR
Trigger: TCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAG...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp AAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGGGCCCACCAGGGCACTTaGCAAAACTGTCTGCATACT +
Preference number: 4 (lower is better)
Translates to: KASVFSWSQALGGRTPCWAHQGT*QNCLHT
Trigger: AGTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGC...CCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000538936.7
CDS-3UTR GCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTGCCCACCAGGGCACTTaGCAAAACTGTCTGCATACT +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAAHQGT*QNCLHT
Trigger: AGTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGC...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CTTGTATCTCTCCTCCTGAGTGAACACCGGGGGCCCCTTGTGCTTGGCGATCTCGATGTAGGGCCTCTCTaGCAGCCTGTGCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: LVSLLLSEHRGPLVLGDLDVGPL*QPVHLL
Trigger: GAGAAGGTGCACAGGCTGGCAGAGAGGCCCTACATC...GAGATCGCCAAGCACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTCAATCTGACGGAAGATaGCCCTTCTCTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAQSDGR*PFSWAP
Trigger: AGGAGCCCAAGAGAAGGGGCATCTTCCGTCAGATTG...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAAGAGCGGAGAGCCTaGTGCAAACCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQKERRA*CKPGTL
Trigger: CAAGGTGCCTGGTTTGCAGCAGGCTCTCCGCTCTTT...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGAAAGAGCGGAGAGCCTaGTGCAAACCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKAKERRA*CKPGTL
Trigger: CAAGGTGCCTGGTTTGCAGCAGGCTCTCCGCTCTTT...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGCTCCCTAAAGCCCTCTaGTCTGCACCTCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQLPKAL*SAPPAT
Trigger: TGTGGCGGGAGGTGCAGAGCAGAGGGCTTTAGGGAG...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGGGTGACCGCAGTCACTaGTCCCTAAAGCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKGDRSH*SLKPSA
Trigger: AGCAGAGGGCTTTAGGGAGCAGTGACTGCGGTCACC...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAACACCTCCCGGAGGCTaGAGTAAGAACCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRTPPGG*SKNLFG
Trigger: GCCGAAGAGGTTCTTACTGCAGCCTCCGGGAGGTGT...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CATAAGGAGAGTGGCGAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGGTCGTGGAGCTCCAGTaGCTTGGTGTGGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HKESGEAAGKEGKRVFLEVVELQ*LGVAGL
Trigger: AAGGCCAGCCACACCAAGGCACTGGAGCTCCACGAC...CTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTCGCCACTCTCCTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp CATAAGGAGAGTGGCGAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGAAGGCTGATGTCACCTaGCAGGAGAGCGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HKESGEAAGKEGKRVFLEKADVT*QESGWQ
Trigger: CTGCCAGCCGCTCTCCTGGCAGGTGACATCAGCCTT...CTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTCGCCACTCTCCTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAGAACCCAGAAACAAGTaGCAGGGCTCCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: EPGQLERAALQSPMSKRREPRNK*QGSSAS
Trigger: ACTGGCACTGGAGCCCTGGCACTTGTTTCTGGGTTC...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCTTGTATCCTGGCTGTaGTGGCAGCCGATTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTLVSWL*WQPIRW
Trigger: CCACCTAATCGGCTGCCAGCACAGCCAGGATACAAG...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp AAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGGCTTTCCACGTTCCTCTaGCTGCTTGTATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KASVFSWSQALGGRTPCWLSTFL*LLVSWL
Trigger: CAGCCAGGATACAAGCAGGCAGAGGAACGTGGAAAG...CCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGTGCTGTGATGGGCTTTaGTTACCAGCAGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGCCDGL*LPAACG
Trigger: GCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGTCCACATGCCCGATGTaGAACAGGTCGAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: PVREGGPAESYVQTQKAQSTCPM*NRSKAP
Trigger: TGGTGCCTTCGACCTGTTCCACATCGGGCATGTGGA...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGTCCACATGCCCGATGTaGAACAGGTCGAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGESTCPM*NRSKAP
Trigger: TGGTGCCTTCGACCTGTTCCACATCGGGCATGTGGA...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp GGAGGGGCCAAGGGGCAAGGAGCCTCAGCTCTGGCTCTCCTCCTTATTCTAGCATCCACATGCCCGATGTaGAACAGGTCGAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: GGAKGQGASALALLLILASTCPM*NRSKAP
Trigger: TGGTGCCTTCGACCTGTTCCACATCGGGCATGTGGA...TGCTAGAATAAGGAGGAGAGCCAGAGCTGAGGCTCCTTGCCCCTTGGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGTCCACATGCCCGATGTaGAACAGGTCGAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKASTCPM*NRSKAP
Trigger: TGGTGCCTTCGACCTGTTCCACATCGGGCATGTGGA...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGCTTGGGCTCCTGGTATaGGTCGGAGCCATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQLGLLV*VGAIPV
Trigger: GACAGGGATGGCTCCGACCCATACCAGGAGCCCAAG...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
CDS-3UTR CCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCTTCTCTTGGGCTCCTaGTATGGGTCGGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKLLLGS*YGSEPS
Trigger: GGATGGCTCCGACCCATACCAGGAGCCCAAGAGAAG...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGATGCCCCTTCTCTTaGGCTCCTGGTATGGGTCGG +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRRCPFS*APGMGR
Trigger: CCGACCCATACCAGGAGCCCAAGAGAAGGGGCATCT...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CCA 90 bp AGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCTTGGTGATGATCCGCTaGACGATGAGGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SPSRARPVREGGPAESYVLVMIR*TMRSVV
Trigger: CACCACAGACCTCATCGTCCAGCGGATCATCACCAA...GACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGTCTGAGCAGCTTTGCTaGAAAGAGCGGAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGSEQLC*KERRAC
Trigger: GCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGA...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCTCTGAGCAGCTTTGCTaGAAAGAGCGGAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGSEQLC*KERRAC
Trigger: GCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGA...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGGCCTCTCCACTGTGCTaGACACCCTCTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQASPLC*TPSLSS
Trigger: GCTGCTCAGAGAGGGTGTCCAGCACAGTGGAGAGGC...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TTCCCCAGTGGGCATGAAAGAAATGAGGGCCCCACAAGCCACATGGACTCTGATATGGGCTGGAGCCCCTaGCTGCCTTCCTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: FPSGHERNEGPTSHMDSDMGWSP*LPSSCP
Trigger: GGGGCAAGAGGAAGGCAGCCAGGGGCTCCAGCCCAT...ATCAGAGTCCATGTGGCTTGTGGGGCCCTCATTTCTTTCATGCCCACTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGGGGAAGCATCCAGCATaGGAGAAAGATGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGGKHPA*EKDGGQ
Trigger: CTGGCCTCCATCTTTCTCCCATGCTGGATGCTTCCC...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACCTCGTCCACCCATTTaGTGGCCTGCACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKPRPPI*WPAPSC
Trigger: ACAAGATGGTGCAGGCCATCAAATGGGTGGACGAGG...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CACCATCTTGTATCTCTCCTCCTGAGTGAACACCGGGGGCCCCTTGTGCTTGGCCCTCGTCCACCCATTTaGTGGCCTGCACCATCTTGT +
Preference number: 4 (lower is better)
Translates to: HHLVSLLLSEHRGPLVLGPRPPI*WPAPSC
Trigger: ACAAGATGGTGCAGGCCATCAAATGGGTGGACGAGG...GCCAAGCACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAAGATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAATCTCCTGGCTGCTGTaGTGGGCTTTGGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRISWLL*WALVTS
Trigger: GCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGAT...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCAGAAGCAAACTGGATaGTCTTCTGAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLQKQTG*SSEMSA
Trigger: TGCAGACATCTCAGAAGATCATCCAGTTTGCTTCTG...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCTCCCCTTGTAGTGATTaGCCTCCTGGTCAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: ALPEPGQLERAALQSPMSSPCSD*PPGQSV
Trigger: TACACTTTGACCAGGAGGTCAATCACTACAAGGGGA...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGGTTCATGCAGATTCATaGTGGGGTAGTTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVVHADS*WGSSSP
Trigger: AGGGGAAGAACTACCCCATCATGAATCTGCATGAAC...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp GCAGCATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGCATTGTTCATGCAGATTCATaGTGGGGTAGTTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: AACGPRGLWWTPLACACIVHADS*WGSSSP
Trigger: AGGGGAAGAACTACCCCATCATGAATCTGCATGAAC...AATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGTCCAATCACCACTTCTaGCACGTACCGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQSNHHF*HVPAGQ
Trigger: CTGGCCTGCCGGTACGTGTCAGAAGTGGTGATTGGA...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGAGGTCCACCTTGAAGTaGCTTAGGAGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTRSTLK*LRSSAV
Trigger: CACAGCAGAGCTCCTAAGTCACTTCAAGGTGGACCT...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGAGGTCCACCTTGAAGTaGCTTAGGAGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKARSTLK*LRSSAV
Trigger: CACAGCAGAGCTCCTAAGTCACTTCAAGGTGGACCT...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGACACCAGGTCCACCTTaGAGTGACTTAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTTPGPP*SDLGAL
Trigger: CAGAGCTCCTAAGTCACTTCAAGGTGGACCTGGTGT...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCACACCAGGTCCACCTTaGAGTGACTTAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGTPGPP*SDLGAL
Trigger: CAGAGCTCCTAAGTCACTTCAAGGTGGACCTGGTGT...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGACACCAGGTCCACCTTaGAGTGACTTAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQTPGPP*SDLGAL
Trigger: CAGAGCTCCTAAGTCACTTCAAGGTGGACCTGGTGT...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGACACCAGGTCCACCTTaGAGTGACTTAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGTPGPP*SDLGAL
Trigger: CAGAGCTCCTAAGTCACTTCAAGGTGGACCTGGTGT...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGATTTCTGTCTTGCCGTaGCACACCAGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQISVLP*HTRSTL
Trigger: CAAGGTGGACCTGGTGTGTCACGGCAAGACAGAAAT...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCTGCCACTGTCAATCTaGCGGAAGATGCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKLPLSI*RKMPLL
Trigger: GAGAAGGGGCATCTTCCGTCAGATTGACAGTGGCAG...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAGCTGGACACCCTCTCTaGGCAGCTTTGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKAGHPL*AALLER
Trigger: TCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGC...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGAGAACTAAAGGGGTaGCCGCAGTCACTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRRELKG*PQSLLP
Trigger: AGGGAGCAGTGACTGCGGTCACCCCTTTAGTTCTCT...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CATAAGGAGAGTGGCGAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGAGAGGGTCTCCTTGCTaGGTGGTTCCCTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: HKESGEAAGKEGKRVFLERGSPC*VVPWSF
Trigger: GAAGGACCAGGGAACCACTCAGCAAGGAGACCCTCT...CTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTCGCCACTCTCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTAGGACATCTCCTGGCTaGTGTGATGGGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCARTSPG*CDGLWL
Trigger: TAACCAAAGCCCATCACAGCAGCCAGGAGATGTCCT...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GTAATGCACCATGTCATAGCTACAGGGACGCTCGCCCGGAGGCCAGGGGAACCCAGGACATCTCCTGGCTaGTGTGATGGGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: VMHHVIATGTLARRPGEPRTSPG*CDGLWL
Trigger: TAACCAAAGCCCATCACAGCAGCCAGGAGATGTCCT...GGGTTCCCCTGGCCTCCGGGCGAGCGTCCCTGTAGCTATGACATGGTGCATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGCAATCTGACGGAAGATaGCCCTTCTCTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQQSDGR*PFSWAP
Trigger: AGGAGCCCAAGAGAAGGGGCATCTTCCGTCAGATTG...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAATCTGACGGAAGATaGCCCTTCTCTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKAQSDGR*PFSWAP
Trigger: AGGAGCCCAAGAGAAGGGGCATCTTCCGTCAGATTG...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGGGTGACCGCAGTCACTaGTCCCTAAAGCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQGDRSH*SLKPSA
Trigger: AGCAGAGGGCTTTAGGGAGCAGTGACTGCGGTCACC...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGTTGGTGATGATCCGCTaGACGATGAGGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKALVMIR*TMRSVV
Trigger: CACCACAGACCTCATCGTCCAGCGGATCATCACCAA...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGTTGGTGATGATCCGCTaGACGATGAGGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGLVMIR*TMRSVV
Trigger: CACCACAGACCTCATCGTCCAGCGGATCATCACCAA...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp AAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGGTTGGCTTCCTTCTTCTaGTTTCGCGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: KASVFSWSQALGGRTPCWLASFF*FRASYS
Trigger: GGAGTATGAGGCGCGAAACCAGAAGAAGGAAGCCAA...CCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000538936.7
CDS-3UTR CCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTTTGGCTTCCTTCTTCTaGTTTCGCGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCALASFF*FRASYS
Trigger: GGAGTATGAGGCGCGAAACCAGAAGAAGGAAGCCAA...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGTGGGAGGTGGTGTaGTCTACACCCAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTQWEVV*STPREL
Trigger: TAGTTCTCTGGGTGTAGACCACACCACCTCCCACTG...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp GGAATCTCCTCTGGCAACACCCTCACAGACACACCCAGTGACAATACTTTGCATGAGCCAGGCGCTGGGTaGCAGGACACCGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GISSGNTLTDTPSDNTLHEPGAG*QDTVLG
Trigger: CCCCAACACGGTGTCCTGCCACCCAGCGCCTGGCTC...ATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AACTGTCTGCATACTCCCGGTACTCAGAGGACATCTCCTGGCTGCTGTGATGGGGGGGCCCCTTGTGCTTaGCGATCTCCTCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: NCLHTPGTQRTSPGCCDGGAPCA*RSPHRC
Trigger: ACACCGATGAGGAGATCGCCAAGCACAAGGGGCCCC...CCCATCACAGCAGCCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGTT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAGCACCAATCTGTCTATaGGGAACTGGCTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKAPICL*GTGWSL
Trigger: GAGGGACCAGCCAGTTCCCCATAGACAGATTGGTGC...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGGTATCCTGGCTGTGCTaGCAGCCGATTAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQVSWLC*QPIRWC
Trigger: GCACCACCTAATCGGCTGCCAGCACAGCCAGGATAC...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCAVMSLP*TQKSQL
Trigger: CAACTGTGACTTCTGTGTTCACGGCAATGACATCAC...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CTTTGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: LWLPAACGPRGLWWTPLAVMSLP*TQKSQL
Trigger: CAACTGTGACTTCTGTGTTCACGGCAATGACATCAC...CGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGCATCTACAGTCAGGGTaGTGTCATTGCCGTGAACAC +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQHLQSG*CHCREH
Trigger: GTGTTCACGGCAATGACATCACCCTGACTGTAGATG...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp ACTGTCTGCATACTCCCGGTACTCAGAGGACATCTCCTGGCTGCTGTGATGGGCATCTCCTGGCTGCTGTaGTGGGCTTTGGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: TVCILPVLRGHLLAAVMGISWLL*WALVTS
Trigger: GCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGAT...GCCCATCACAGCAGCCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp GGTAGTCACCCATGGCCCGTGCCTGGCGCAGCTGGTTGGAGTGGCCGTAATGCACAGAAGCAAACTGGATaGTCTTCTGAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSHPWPVPGAAGWSGRNAQKQTG*SSEMSA
Trigger: TGCAGACATCTCAGAAGATCATCCAGTTTGCTTCTG...TGCATTACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGGTCCACCTTGAAGTaGCTTAGGAGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRRSTLK*LRSSAV
Trigger: CACAGCAGAGCTCCTAAGTCACTTCAAGGTGGACCT...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAATTGGGCTCCTTGAAGTaGCTTAGGAGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKLGSLK*LRSSAV
Trigger: CACAGCAGAGCTCCTAAGTCACTTCAAGGAGCCCAA...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571105.5
CDS-3UTR GCA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTACCCATTTGATGGCCTaGACCATCTTGTATCTCTCC +
Preference number: 4 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCATHLMA*TILYLS
Trigger: GGAGAGATACAAGATGGTGCAGGCCATCAAATGGGT...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGTGGACACCCCTTGCGTaGGCTTGCATTCTCTGTACC +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQWTPLA*ACILCT
Trigger: GGTACAGAGAATGCAAGCGCACGCAAGGGGTGTCCA...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTCTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: GRQACFPGARRWVAGHRVLAKTV*ILPVLR
Trigger: TCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAG...AACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000538936.7
CDS-3UTR GCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAGCCCACCAGGGCACTTaGCAAAACTGTCTGCATACT +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKAHQGT*QNCLHT
Trigger: AGTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGC...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGTCCAGGAAGTCCACATaGCCGATGTGGAACAGGTCG +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQSRKST*PMWNRS
Trigger: CGACCTGTTCCACATCGGGCATGTGGACTTCCTGGA...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAATCTGACGGAAGATaGCCCTTCTCTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKQSDGR*PFSWAP
Trigger: AGGAGCCCAAGAGAAGGGGCATCTTCCGTCAGATTG...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGAAAGAGCGGAGAGCCTaGTGCAAACCAGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQKERRA*CKPGTL
Trigger: CAAGGTGCCTGGTTTGCAGCAGGCTCTCCGCTCTTT...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGTCCACATGCCCGATGTaGAACAGGTCGAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQSTCPM*NRSKAP
Trigger: TGGTGCCTTCGACCTGTTCCACATCGGGCATGTGGA...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTTTGGTGATGATCCGCTaGACGATGAGGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPLVMIR*TMRSVV
Trigger: CACCACAGACCTCATCGTCCAGCGGATCATCACCAA...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGTTGGCTTCCTTCTTCTaGTTTCGCGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGELASFF*FRASYS
Trigger: GGAGTATGAGGCGCGAAACCAGAAGAAGGAAGCCAA...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCTTGGCTTCCTTCTTCTaGTTTCGCGCCTCATACTCC +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGLASFF*FRASYS
Trigger: GGAGTATGAGGCGCGAAACCAGAAGAAGGAAGCCAA...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGTCTGAGCAGCTTTGCTaGAAAGAGCGGAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQSEQLC*KERRAC
Trigger: GCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGA...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACAGTGGGAGGTGGTGTaGTCTACACCCAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKQWEVV*STPREL
Trigger: TAGTTCTCTGGGTGTAGACCACACCACCTCCCACTG...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000571105.5
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGAATGGGAATCTCCTCTaGCAACACCCTCACAGACAC +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKANGNLL*QHPHRH
Trigger: GTGTCTGTGAGGGTGTTGCCAGAGGAGATTCCCATT...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGACTTCTGACACGTACTaGTCAAAGTGTAAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKATSDTY*SKCKPA
Trigger: CGCGGGCTTACACTTTGACCAGTACGTGTCAGAAGT...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572995.5
CDS-3UTR TCA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: EPGQLERAALQSPMSKRRVMSLP*TQKSQL
Trigger: CAACTGTGACTTCTGTGTTCACGGCAATGACATCAC...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQVMSLP*TQKSQL
Trigger: CAACTGTGACTTCTGTGTTCACGGCAATGACATCAC...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGVMSLP*TQKSQL
Trigger: CAACTGTGACTTCTGTGTTCACGGCAATGACATCAC...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCTCCCCTTGTAGTGATTaGCCTCCTGGTCAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGSPCSD*PPGQSV
Trigger: TACACTTTGACCAGGAGGTCAATCACTACAAGGGGA...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGGTTCATGCAGATTCATaGTGGGGTAGTTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQVHADS*WGSSSP
Trigger: AGGGGAAGAACTACCCCATCATGAATCTGCATGAAC...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR TCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGATTTCTGTCTTGCCGTaGCACACCAGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQISVLP*HTRSTL
Trigger: CAAGGTGGACCTGGTGTGTCACGGCAAGACAGAAAT...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
CDS-3UTR TCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGTCCAATCACCACTTCTaGCACGTACTGGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKASNHHF*HVLVKV
Trigger: CACTTTGACCAGTACGTGTCAGAAGTGGTGATTGGA...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572995.5
CDS-3UTR GCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGACCCATTTGATGGCCTaGACCATCTTGTATCTCTCC +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQTHLMA*TILYLS
Trigger: GGAGAGATACAAGATGGTGCAGGCCATCAAATGGGT...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGACCCATTTGATGGCCTaGACCATCTTGTATCTCTCC +
Preference number: 4 (lower is better)
Translates to: RARPVREGGPAESYVQTQTHLMA*TILYLS
Trigger: GGAGAGATACAAGATGGTGCAGGCCATCAAATGGGT...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGACCCATTTGATGGCCTaGACCATCTTGTATCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKATHLMA*TILYLS
Trigger: GGAGAGATACAAGATGGTGCAGGCCATCAAATGGGT...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp GGACATCTCCTGGCTGCTGTGATGGGCTTTGGTTACCAGCAGCATGCGGCCCACACCCATTTGATGGCCTaGACCATCTTGTATCTCTCC +
Preference number: 4 (lower is better)
Translates to: GHLLAAVMGFGYQQHAAHTHLMA*TILYLS
Trigger: GGAGAGATACAAGATGGTGCAGGCCATCAAATGGGT...GTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGAGATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR GCA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGCTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: REGGPAESYVQTQKAQKQLAKTV*ILPVLR
Trigger: TCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAG...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGCTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGELAKTV*ILPVLR
Trigger: TCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAG...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR GCA 90 bp GTGACAATACTTTGCATCCTTCAATCCAGTCAAGCTGACACTCAGCATTCACCACGCTGCACTCCCGGCTaGTGGGTGCATGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VTILCILQSSQADTQHSPRCTPG*WVHGGG
Trigger: GCCCCCACCATGCACCCAGCAGCCGGGAGTGCAGCG...TGGTGAATGCTGAGTGTCAGCTTGACTGGATTGAAGGATGCAAAGTATTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CCA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGATTCACCATCACACCTaGGAAGCATGGAACCCAGAA +
Preference number: 4 (lower is better)
Translates to: RPVREGGPAESYVQTQKAIHHHT*EAWNPE
Trigger: TTCTGGGTTCCATGCTTCCCAGGTGTGATGGTGAAT...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp TCGGGTGAGGGGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACACATCTACAGTCAGGGTaGTGTCATTGCCGTGAACAC +
Preference number: 4 (lower is better)
Translates to: SGEGACQNCLHTPGTQRTHLQSG*CHCREH
Trigger: GTGTTCACGGCAATGACATCACCCTGACTGTAGATG...TGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGCAAACTGGATaGTCTTCTGAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRARPVREGGPAESYVQTQKQTG*SSEMSA
Trigger: TGCAGACATCTCAGAAGATCATCCAGTTTGCTTCTG...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGCAGAAGCAAACTGGATaGTCTTCTGAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGEQKQTG*SSEMSA
Trigger: TGCAGACATCTCAGAAGATCATCCAGTTTGCTTCTG...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGGTTCATGCAGATTCATaGTGGGGTAGTTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VREGGPAESYVQTQKAQKVHADS*WGSSSP
Trigger: AGGGGAAGAACTACCCCATCATGAATCTGCATGAAC...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGAGGACATCTCCTGGCTaGTGTGATGGGCTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQRTSPG*CDGLWL
Trigger: TAACCAAAGCCCATCACAGCAGCCAGGAGATGTCCT...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR GCA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGACTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: QLERAALQSPMSKRRRRRLAKTV*ILPVLR
Trigger: TCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAG...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CCA 90 bp GGAATCTCCTCTGGCAACACCCTCACAGACACACCCAGTGACAATACTTTGCATCTTGGGCTCCTGGTATaGGTCGGAGCCATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GISSGNTLTDTPSDNTLHLGLLV*VGAIPV
Trigger: GACAGGGATGGCTCCGACCCATACCAGGAGCCCAAG...ATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
3UTR CAA 72 bp GAGCCCCGCGCAGCACTGCCACCAGGCTTTATTCGGTaGTACCAAAGAGATTTCCGTCAGCCATGTACAAAC +
Preference number: 4 (lower is better)
Translates to: EPRAALPPGFIR*YQRDFRQPCTN
Trigger: GTTTGTACATGGCTGACGGAAATCTCTTTGGTACAACCGAATAAAGCCTGGTGGCAGTGCTGCGCGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACAGAAGCAAACTGGATaGTCTTCTGAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPEPGQLERAALQSPMSKQKQTG*SSEMSA
Trigger: TGCAGACATCTCAGAAGATCATCCAGTTTGCTTCTG...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR TCA 90 bp GGAATCTCCTCTGGCAACACCCTCACAGACACACCCAGTGACAATACTTTGCATAGTGTAAGCCCGCGATaGTGTAGGGCCTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GISSGNTLTDTPSDNTLHSVSPR*CRASLP
Trigger: TGGCAGAGAGGCCCTACATCATCGCGGGCTTACACT...ATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp TCGGGTGAGGGGGCTTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACATCCCCTTGTAGTGATTaGCCTCCTGGTCAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: SGEGACQNCLHTPGTQRTSPCSD*PPGQSV
Trigger: TACACTTTGACCAGGAGGTCAATCACTACAAGGGGA...TGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGCCCCCTCACCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp GCCTCTCCCAGCCCACTGACTCAAATGGGAATCTCCTCTGGCAACACCCTCACACACGTGATCACAAGGTaGAGTCCCACAATAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ASPSPLTQMGISSGNTLTHVITR*SPTISH
Trigger: ATGGCTTATTGTGGGACTTCACCTTGTGATCACGTG...TGTGAGGGTGTTGCCAGAGGAGATTCCCATTTGAGTCAGTGGGCTGGGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR GCA 90 bp GTGCTTGGCGATCTCCTCATCGGTGTGCACGCCTACGATGAGGTAGTCACCCATCTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGA +
Preference number: 4 (lower is better)
Translates to: VLGDLLIGVHAYDEVVTHLAKTV*ILPVLR
Trigger: TCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAG...ATGGGTGACTACCTCATCGTAGGCGTGCACACCGATGAGGAGATCGCCAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR TCA 90 bp GGAATCTCCTCTGGCAACACCCTCACAGACACACCCAGTGACAATACTTTGCATGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTG +
Preference number: 4 (lower is better)
Translates to: GISSGNTLTDTPSDNTLHVMSLP*TQKSQL
Trigger: CAACTGTGACTTCTGTGTTCACGGCAATGACATCAC...ATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR TCA 90 bp GTGACAATACTTTGCATCCTTCAATCCAGTCAAGCTGACACTCAGCATTCACCAATTTCTGTCTTGCCGTaGCACACCAGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: VTILCILQSSQADTQHSPISVLP*HTRSTL
Trigger: CAAGGTGGACCTGGTGTGTCACGGCAAGACAGAAAT...TGGTGAATGCTGAGTGTCAGCTTGACTGGATTGAAGGATGCAAAGTATTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS GCA 90 bp CCGCCAGAGGTAGACGGGGTCGCCCACGGCAGGGCGCGGAGCCTCTaGAGCCCGACCCTCCCGGCAGGCGAGCCCCGCAGCCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: PPEVDGVAHGRARSL*SPTLPAGEPRSLPA
Trigger: GGCTGGCAGGCTGCGGGGCTCGCCTGCCGGGAGGGTCGGGCTGCAGAGGCTCCGCGCCCTGCCGTGGGCGACCCCGTCTACCTCTGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
CDS TCA 90 bp GTGGCTCCAGATCTCAGCGCGGTGGCTGCACCGGAGAGGTCGGCGTaGCCGGGCGGGGCCTCCGCCAGAGGTAGACGGGGTCGCCCACGG +
Preference number: 5 (lower is better)
Translates to: VAPDLSAVAAPERSA*PGGASARGRRGRPR
Trigger: CCGTGGGCGACCCCGTCTACCTCTGGCGGAGGCCCCGCCCGGTCACGCCGACCTCTCCGGTGCAGCCACCGCGCTGAGATCTGGAGCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573927.5
CDS-3UTR CAA 90 bp CTCCCACCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTCGCCCGCGCGGCTGGCCAAGCGCCAGATCCTaGCGCGCCTCCAGCGCTCGC +
Preference number: 5 (lower is better)
Translates to: LPPSARSLRASSARPRGWPSARS*RASSAR
Trigger: GCGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGG...CCAGCCGCGCGGGCGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS GCA 90 bp ACGGAGAAGCAGGGAGGCCGTGGCTCCAGATCTCAGCGCGGTGGCTaGACCGGAGAGGTCGGCGTGACCGGGCGGGGCCTCCGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: TEKQGGRGSRSQRGG*TGEVGVTGRGLRQR
Trigger: CCTCTGGCGGAGGCCCCGCCCGGTCACGCCGACCTCTCCGGTGCAGCCACCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTCTCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573927.5
CDS CCA 90 bp GGTTACGGAGAAGCAGGGAGGCCGTGGCTCCAGATCTCAGCGCGGTaGCTGCACCGGAGAGGTCGGCGTGACCGGGCGGGGCCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: GYGEAGRPWLQISAR*LHRRGRRDRAGPPP
Trigger: TGGCGGAGGCCCCGCCCGGTCACGCCGACCTCTCCGGTGCAGCCACCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573927.5
CDS-3UTR CAA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCTCAGCCCCTGAAGGCTaGGGAGCCTCGCTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RGPGGGARRSGAFQAAGASAPEG*GASLAV
Trigger: CACTGCCAGCGAGGCTCCCAAGCCTTCAGGGGCTGA...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CAA 90 bp CTCCGCAGGTCCCCGTACGCGCGGCGCTCCCAGCCCTACAGAGGGGCGGAACCCAACACCGGGGGCCCCTaGTGCTTGGCGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LRRSPYARRSQPYRGAEPNTGGP*CLAISS
Trigger: TGAGGAGATCGCCAAGCACAAGGGGCCCCCGGTGTT...GGGTTCCGCCCCTCTGTAGGGCTGGGAGCGCCGCGCGTACGGGGACCTGCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS CCA 90 bp CTCGCCCGGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTaGTTGCTGGTGGTTACGGAGAAGCAGGGAGGCCGTGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LARRPGEPLDRSRAS*LLVVTEKQGGRGSR
Trigger: TCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGGCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS-3UTR CAA 90 bp GGTATGAGAAGGCAGCCGAGTGTGCGGCGGCAGGGCAAGGTTGGCCTGGGCCGCGAGCTTGAGGGGGCGTaGGGCTCCCACCAAGCGCCA +
Preference number: 5 (lower is better)
Translates to: GMRRQPSVRRQGKVGLGRELEGA*GSHQAP
Trigger: TGGCGCTTGGTGGGAGCCCAACGCCCCCTCAAGCTC...GCGGCCCAGGCCAACCTTGCCCTGCCGCCGCACACTCGGCTGCCTTCTCATACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS GCA 90 bp CCCGGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTTaGTGGTGGTTACGGAGAAGCAGGGAGGCCGTGGCTCCAGATCTC +
Preference number: 5 (lower is better)
Translates to: PGGQGNPWTGAGQAG*WWLRRSREAVAPDL
Trigger: GAGATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS CCA 90 bp GGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTTGCTGGTaGTTACGGAGAAGCAGGGAGGCCGTGGCTCCAGATCTCAGCGCG +
Preference number: 5 (lower is better)
Translates to: GQGNPWTGAGQAGCW*LRRSREAVAPDLSA
Trigger: CGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS GCA 90 bp CCTCGACCCAGGGGCCTCGGGGATTCCGCCGCCGACTCACCTGGCTaGTGTGATGGGCTTTGGTTACCAGCAGCATGCGGCCCACGAGGT +
Preference number: 5 (lower is better)
Translates to: PRPRGLGDSAADSPG*CDGLWLPAACGPRG
Trigger: ACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGTGAGTCGGCGGCGGAATCCCCGAGGCCCCTGGGTCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571581.5
CDS CCA 90 bp CCGGGCAAGCTGGTTGCTGGTGGTTACGGAGAAGCAGGGAGGCCGTaGCTCCAGATCTCAGCGCGGTGGCTGCACCGGAGAGGTCGGCGT +
Preference number: 5 (lower is better)
Translates to: PGKLVAGGYGEAGRP*LQISARWLHRRGRR
Trigger: ACGCCGACCTCTCCGGTGCAGCCACCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573927.5
CDS CCA 90 bp GGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTTGCTaGTGGTTACGGAGAAGCAGGGAGGCCGTGGCTCCAGATCTCAGC +
Preference number: 5 (lower is better)
Translates to: GGQGNPWTGAGQAGC*WLRRSREAVAPDLS
Trigger: GCTGAGATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS-3UTR CAA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCACCCCTTGCGTGCGCTaGCATTCTCTGTACCTCCCA +
Preference number: 5 (lower is better)
Translates to: RGPGGGARRSGAFQAAGATPCVR*HSLYLP
Trigger: TGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGT...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGGGCGGCAGGGCAAGGTaGGCCTGGGCCGCCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGGGRAR*AWAAQR
Trigger: CCTCTGGGCGGCCCAGGCCAACCTTGCCCTGCCGCC...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CAA 90 bp AGGGGGCGTTGGGCTCCCACCAAGCGCCAGATCCTTGCGCGCCTCCAGCGCTCGCAGGAGTACTGGGGATaGCCTGGGGGACGACTCCTA +
Preference number: 5 (lower is better)
Translates to: RGRWAPTKRQILARLQRSQEYWG*PGGRLL
Trigger: TAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTG...CGAGCGCTGGAGGCGCGCAAGGATCTGGCGCTTGGTGGGAGCCCAACGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS TCA 90 bp ACCCAGGGGCCTCGGGGATTCCGCCGCCGACTCACCTGGCTGCTGTaGTGGGCTTTGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: TQGPRGFRRRLTWLL*WALVTSSMRPTRSV
Trigger: CACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGTGAGTCGGCGGCGGAATCCCCGAGGCCCCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571581.5
CDS CCA 90 bp CCGGGCAAGCTGGTTGCTGGTGGTTACGGAGAAGCAGGGAGGCCGTaGCTCCAGATCTCAGCGCGGTGGCAGCCATCGCACCACACCCTC +
Preference number: 5 (lower is better)
Translates to: PGKLVAGGYGEAGRP*LQISARWQPSHHTL
Trigger: GAGGGTGTGGTGCGATGGCTGCCACCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CAA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCACCTCGTCCACCCATTaGATGGCCTGCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: RGPGGGARRSGAFQAAGATSSTH*MACTIL
Trigger: CAAGATGGTGCAGGCCATCAAATGGGTGGACGAGGT...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GCCCGGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTTGCTGGTGACCTCGTCCACCCATTaGATGGCCTGCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: ARRPGEPLDRSRASWLLVTSSTH*MACTIL
Trigger: CAAGATGGTGCAGGCCATCAAATGGGTGGACGAGGT...CACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CAA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCACCCCTTGCGTGCGCTaGCATTCTCTGTACCTCCCA +
Preference number: 5 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCTPCVR*HSLYLP
Trigger: TGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGT...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCTGTGGTGGACACCCCTaGCGTGCGCTTGCATTCTCT +
Preference number: 5 (lower is better)
Translates to: PGGGARRSGAFQAAGAVCCGGHP*RALAFS
Trigger: AGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACA...GCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CAGCATCAGGAGTACTGGGGATTGCCTGGGGGACGACTCCTAGGGCTGGGCGCCGGGGGCCCCTTGTGCTaGGCGATCTCCTCATCGGTG +
Preference number: 5 (lower is better)
Translates to: QHQEYWGLPGGRLLGLGAGGPLC*AISSSV
Trigger: CACCGATGAGGAGATCGCCAAGCACAAGGGGCCCCC...GGCGCCCAGCCCTAGGAGTCGTCCCCCAGGCAATCCCCAGTACTCCTGATGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CAA 90 bp TGGGATACCCCGGTCCAGGGGTTCCGCCCACCAGGGCACTGGGAGCAGCCTTCTAACACCGGGGGCCCCTaGTGCTTGGCGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: WDTPVQGFRPPGHWEQPSNTGGP*CLAISS
Trigger: TGAGGAGATCGCCAAGCACAAGGGGCCCCCGGTGTT...AGAAGGCTGCTCCCAGTGCCCTGGTGGGCGGAACCCCTGGACCGGGGTATCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CAA 90 bp TGGAGAGCCTCGCGTGCACCTCGCCTCCAGCTCCTGTGCTGGGTCGTGAGGTCGGTTCTCCCTCCGCCGTaGGGTGTGACTCCGGAACTG +
Preference number: 5 (lower is better)
Translates to: WRASRAPRLQLLCWVVRSVLPPP*GVTPEL
Trigger: CAGTTCCGGAGTCACACCCAACGGCGGAGGGAGAAC...CGACCTCACGACCCAGCACAGGAGCTGGAGGCGAGGTGCACGCGAGGCTCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS CCA 90 bp CTCGGGGATTCCGCCGCCGACTCACCTGGCTGCTGTGATGGGCTTTaGTTACCAGCAGCATGCGGCCCACGAGGTCTGTGGTGGACACCC +
Preference number: 5 (lower is better)
Translates to: LGDSAADSPGCCDGL*LPAACGPRGLWWTP
Trigger: GGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGTGAGTCGGCGGCGGAATCCCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571581.5
CDS-3UTR CAA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCGCCCACCAGGGCACTaGCCAAAACTGTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLRPPGH*PKLSAY
Trigger: GTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGCG...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCGGGGGCCCCTTGTGCTaGGCGATCTCCTCATCGGTG +
Preference number: 5 (lower is better)
Translates to: ALPEPGQLERAALQSPMSGGPLC*AISSSV
Trigger: CACCGATGAGGAGATCGCCAAGCACAAGGGGCCCCC...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCAACACCGGGGGCCCCTaGTGCTTGGCGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LTSPSRARPVREGGPAESNTGGP*CLAISS
Trigger: TGAGGAGATCGCCAAGCACAAGGGGCCCCCGGTGTT...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CAGCCGATTAGGTGGTGCCCACCTGGATTGAGGGTGGGTCTGCCTCTCCCAGCCAAGCCGCGCCTAGCCTaGGTGCTCCCTGGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: QPIRWCPPGLRVGLPLPAKPRLA*VLPGGS
Trigger: ACTTCCCCCAGGGAGCACCAAGGCTAGGCGCGGCTT...GGCTGGGAGAGGCAGACCCACCCTCAATCCAGGTGGGCACCACCTAATCGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS GCA 90 bp CACCAGGGCACTGGCTGCTGTGATGGGCTTTGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGC +
Preference number: 5 (lower is better)
Translates to: HQGTGCCDGLWLPAA*GPRGLWWTPLACAC
Trigger: GCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGTGCCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573636.6
CDS-3UTR CAA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCAGCCGGGCAAGCTGGTaGCTGGTGGTTACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLSRASW*LVVTEK
Trigger: CTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCT...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570391.5
CDS-3UTR CAA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAACACCGGGGGCCCCTaGTGCTTGGCGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ALPEPGQLERAALQSPMSNTGGP*CLAISS
Trigger: TGAGGAGATCGCCAAGCACAAGGGGCCCCCGGTGTT...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGGCGCGGCTGGTTCCTTaGGGATGCGGAGGTGCGACG +
Preference number: 5 (lower is better)
Translates to: REGGPAESYVQTQKAQKQARLVP*GCGGAT
Trigger: CGTCGCACCTCCGCATCCCAAAGGAACCAGCCGCGC...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CAA 90 bp GCAGCATGCGGCCCACGAGGTCTGTGGTGGACACCCCTTGCGTGCGCTTGCATTAGCCGGGCAAGCTGGTaGCTGGTGGTTACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: AACGPRGLWWTPLACACISRASW*LVVTEK
Trigger: CTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCT...AATGCAAGCGCACGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CAA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTACCCCTTGCGTGCGCTaGCATTCTCTGTACCTCCCA +
Preference number: 5 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPTPCVR*HSLYLP
Trigger: TGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGT...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CTCACCAGCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCAAGATGCCCCTTCTCTaGGGCTCCTGGTATGGGTCG +
Preference number: 5 (lower is better)
Translates to: LTSPSRARPVREGGPAESKMPLL*GSWYGS
Trigger: CGACCCATACCAGGAGCCCAAGAGAAGGGGCATCTT...GGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGCTGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CAA 90 bp AGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTAAGATGCCCCTTCTCTaGGGCTCCTGGTATGGGTCG +
Preference number: 5 (lower is better)
Translates to: RSGAFQAAGAVCPSHFRPKMPLL*GSWYGS
Trigger: CGACCCATACCAGGAGCCCAAGAGAAGGGGCATCTT...AGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
CDS-3UTR CAA 90 bp ACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGTCATACTCCAACCTGTaGGTGATGATCCGCTGGACG +
Preference number: 5 (lower is better)
Translates to: TRWGRTQERCVSGCRCRLSYSNL*VMIRWT
Trigger: CGTCCAGCGGATCATCACCAACAGGTTGGAGTATGA...CAGACGGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGGGGCCCCTTGTGCTaGGCGATCTCCTCATCGGTG +
Preference number: 5 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGEGGPLC*AISSSV
Trigger: CACCGATGAGGAGATCGCCAAGCACAAGGGGCCCCC...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp AAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGGAGCCGGGCAAGCTGGTaGCTGGTGGTTACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KASVFSWSQALGGRTPCWSRASW*LVVTEK
Trigger: CTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCT...CCAACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CAA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGAACACCGGGGGCCCCTaGTGCTTGGCGATCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGENTGGP*CLAISS
Trigger: AGAGGAGATCGCCAAGCACAAGGGGCCCCCGGTGTT...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CAA 90 bp AGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCACCTCGTCCACCCATTaGATGGCCTGCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: SGAFQAAGAVCPSHFRPLTSSTH*MACTIL
Trigger: CAAGATGGTGCAGGCCATCAAATGGGTGGACGAGGT...GAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCTGTGGTGGACACCCCTaGCGTGCGCTTGCATTCTCT +
Preference number: 5 (lower is better)
Translates to: ALPEPGQLERAALQSPMSCGGHP*RALAFS
Trigger: AGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACA...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GCCCTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAGATGCCCCTTCTCTaGGGCTCCTGGTATGGGTCG +
Preference number: 5 (lower is better)
Translates to: ALPEPGQLERAALQSPMSKMPLL*GSWYGS
Trigger: CGACCCATACCAGGAGCCCAAGAGAAGGGGCATCTT...GGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CAA 90 bp CGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGAAGATGCCCCTTCTCTaGGGCTCCTGGTATGGGTCG +
Preference number: 5 (lower is better)
Translates to: RFRLQVPSARLTSGLSTVKMPLL*GSWYGS
Trigger: CGACCCATACCAGGAGCCCAAGAGAAGGGGCATCTT...CACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
CDS-3UTR CAA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAGGGGGCCCCTTGTGCTaGGCGATCTCCTCATCGGTG +
Preference number: 5 (lower is better)
Translates to: QLERAALQSPMSKRRRRRGGPLC*AISSSV
Trigger: CACCGATGAGGAGATCGCCAAGCACAAGGGGCCCCC...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAACACCGGGGGCCCCTaGTGCTTGGCGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PVREGGPAESYVQTQKAQNTGGP*CLAISS
Trigger: TGAGGAGATCGCCAAGCACAAGGGGCCCCCGGTGTT...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GGTATGAGAAGGCAGCCGAGTGTGCGGCGGCAGGGCAAGGTTGGCCTGGGCCGCATCATAAGCCTCATTTaGAATGCGGCGAGACCAGGC +
Preference number: 5 (lower is better)
Translates to: GMRRQPSVRRQGKVGLGRIISLI*NAARPG
Trigger: GCCTGGTCTCGCCGCATTCAAAATGAGGCTTATGAT...GCGGCCCAGGCCAACCTTGCCCTGCCGCCGCACACTCGGCTGCCTTCTCATACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS GCA 90 bp TTGCCAAAACTGTCTGCATACTCCCGGTACTCAGAGGACATCTCCTaGACAGAAGGTCAGAGCAGGGCTGAGGGGCCTGCCCTCCCGGCG +
Preference number: 5 (lower is better)
Translates to: LPKLSAYSRYSEDIS*TEGQSRAEGPALPA
Trigger: CGCCGGGAGGGCAGGCCCCTCAGCCCTGCTCTGACCTTCTGTGCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571581.5
CDS CCA 90 bp GGCTGTCTCTCTACCCTGGCCCTTAGCCCACTAGTGCTGGCCAACTaGGTGGCTCTCTTCCCTGCGAGGGTCTCAGGCAAAGGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: GCLSTLALSPLVLAN*VALFPARVSGKGRD
Trigger: ATCTCTGCCTTTGCCTGAGACCCTCGCAGGGAAGAGAGCCACCCAGTTGGCCAGCACTAGTGGGCTAAGGGCCAGGGTAGAGAGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570388.5
CDS-3UTR CAA 90 bp CGGGGACCAGGTGGGGGCGCACGCAGGAGCGGTGCGTTTCAGGCTGCAGGTGCCAAGTCACAGTTGTATTaGTCCAGGGTCTCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: RGPGGGARRSGAFQAAGAKSQLY*SRVSSV
Trigger: TACACTAGAGACCCTGGACAAATACAACTGTGACTT...GGCACCTGCAGCCTGAAACGCACCGCTCCTGCGTGCGCCCCCACCTGGTCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTCGCCCACCAGGGCACTaGCCAAAACTGTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCARPPGH*PKLSAY
Trigger: GTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGCG...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGGACTCCGGAACTGGCTaGGGCTCTGGCCTCCAATGC +
Preference number: 5 (lower is better)
Translates to: VREGGPAESYVQTQKAQKDSGTG*GSGLQC
Trigger: GCATTGGAGGCCAGAGCCCAAGCCAGTTCCGGAGTC...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS TCA 90 bp GAACAGAGGGAACGAGGTGAGCCCATGCGGAGCCTCACCTTGAAGTaGCTTAGGAGCTCTGCTGTGACCGCGTACGGGGCTCCAATCACC +
Preference number: 5 (lower is better)
Translates to: EQRERGEPMRSLTLK*LRSSAVTAYGAPIT
Trigger: GGTGATTGGAGCCCCGTACGCGGTCACAGCAGAGCTCCTAAGTCACTTCAAGGTGAGGCTCCGCATGGGCTCACCTCGTTCCCTCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571944.1
CDS GCA 90 bp AGCATCGGTGTGCACGCCTACGATGAGGTAGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGAGTGGCCGTAATGCACCATGTCATA +
Preference number: 5 (lower is better)
Translates to: SIGVHAYDEVVTHGP*LAQLVGVAVMHHVI
Trigger: TATGACATGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACCTCATCGTAGGCGTGCACACCGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000570388.5
ENST00000572473.1
ENST00000573927.5
CDS GCA 90 bp ACCACTTCTGACACGTACTGTGGGGACAGTGGGGGCAGAAAGACTTaGTCGGTCCCTGCTACTGGTAAGCCAGGGCCACAGGGTGGTGAG +
Preference number: 5 (lower is better)
Translates to: TTSDTYCGDSGGRKT*SVPATGKPGPQGGE
Trigger: CTCACCACCCTGTGGCCCTGGCTTACCAGTAGCAGGGACCGAGCAAGTCTTTCTGCCCCCACTGTCCCCACAGTACGTGTCAGAAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572924.2
CDS GCA 90 bp TCCATCGGTGTGCACGCCTACGATGAGGTAGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGAGTGGCCGTAATGCACCATGTCATA +
Preference number: 5 (lower is better)
Translates to: SIGVHAYDEVVTHGP*LAQLVGVAVMHHVI
Trigger: TATGACATGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACCTCATCGTAGGCGTGCACACCGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572157.1
CDS-3UTR CAA 90 bp AGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGTGTGGTGGACACCCCTaGCGTGCGCTTGCATTCTCT +
Preference number: 5 (lower is better)
Translates to: RPVREGGPAESYVQTQKACGGHP*RALAFS
Trigger: AGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACA...CGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp TGCTGTGATGGGCTTTGGTTACCAGCAGCATGCGGCCCACGAGGTCTGTGGTGGTGTGGTGGACACCCCTaGCGTGCGCTTGCATTCTCT +
Preference number: 5 (lower is better)
Translates to: CCDGLWLPAACGPRGLWWCGGHP*RALAFS
Trigger: AGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACA...CCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CAA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGCGCCCACCAGGGCACTaGCCAAAACTGTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: REGGPAESYVQTQKAQKQRPPGH*PKLSAY
Trigger: GTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGCG...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CAA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGCGCCCACCAGGGCACTaGCCAAAACTGTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGERPPGH*PKLSAY
Trigger: GTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGCG...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CAA 90 bp AACTGTCTGCATACTCCCGGTACTCAGAGGACATCTCCTGGCTGCTGTGATGGGGGGGGCCCCTTGTGCTaGGCGATCTCCTCATCGGTG +
Preference number: 5 (lower is better)
Translates to: NCLHTPGTQRTSPGCCDGGGPLC*AISSSV
Trigger: CACCGATGAGGAGATCGCCAAGCACAAGGGGCCCCC...CCCATCACAGCAGCCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGTT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CAA 90 bp CCACTGTGCTGGACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTTGGAGCTCCAGTGCCTaGGTGTGGCTGGCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PLCWTPSLSSFAGKSGEPWSSSA*VWLAFL
Trigger: CAAGAAGGCCAGCCACACCAAGGCACTGGAGCTCCA...AGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGTCCAGCACAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CAA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGGAGGGCACAGTGAGCTaGAAGGCTGATGTCACCTGC +
Preference number: 5 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGEGTVS*KADVTC
Trigger: GCAGGTGACATCAGCCTTCAAGCTCACTGTGCCCTC...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CAA 90 bp GGAAGGCAAGCGTGTTTTCCTGGAGCCAGGCGCTGGGTGGCAGGACACCGTGTTGACATGACCAGGACCTaGGGGGAGCATGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: GRQACFPGARRWVAGHRVDMTRT*GEHEMV
Trigger: CACCATTTCATGCTCCCCCAAGGTCCTGGTCATGTC...AACACGGTGTCCTGCCACCCAGCGCCTGGCTCCAGGAAAACACGCTTGCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS TCA 90 bp CGCTGGACGATGAGGTCTGTGGTGAGGTTGCTGCCACTGTCAATCTaGCGGAAGATGCCCCTTCTCTTGGGCTCCTGGTATGGGTCGGAG +
Preference number: 5 (lower is better)
Translates to: RWTMRSVVRLLPLSI*RKMPLLLGSWYGSE
Trigger: CTCCGACCCATACCAGGAGCCCAAGAGAAGGGGCATCTTCCGTCAGATTGACAGTGGCAGCAACCTCACCACAGACCTCATCGTCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570388.5
ENST00000570391.5
ENST00000572924.2
ENST00000572995.5
ENST00000574343.5
ENST00000576343.5
CDS TCA 90 bp TCGTCCACCCATTTGATGGCCTGCACCATCTTGTATCTCTCCTCCTaGGTGAACACCGGGGGCCCCTTGTGCTTGGCGATCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSTHLMACTILYLSS*VNTGGPLCLAISSW
Trigger: CCAGGAGGAGATCGCCAAGCACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAAGATGGTGCAGGCCATCAAATGGGTGGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572473.1
ENST00000573927.5
CDS GCA 90 bp ATCATCGGTGTGCACGCCTACGATGAGGTAGTCACCCATGGCCCGTaGCTGGCGCAGCTGGTTGGAGTGGCCGTAATGCACCATGTCATA +
Preference number: 5 (lower is better)
Translates to: IIGVHAYDEVVTHGP*LAQLVGVAVMHHVI
Trigger: TATGACATGGTGCATTACGGCCACTCCAACCAGCTGCGCCAGGCACGGGCCATGGGTGACTACCTCATCGTAGGCGTGCACACCGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576343.5
CDS-3UTR CAA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGGGGGGCCCCTTGTGCTaGGCGATCTCCTCTAGGAAA +
Preference number: 5 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQGGPLC*AISSRK
Trigger: TTTCCTAGAGGAGATCGCCAAGCACAAGGGGCCCCC...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331285.7
CDS-3UTR CAA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGACCTCGTCCACCCATTaGATGGCCTGCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGETSSTH*MACTIL
Trigger: CAAGATGGTGCAGGCCATCAAATGGGTGGACGAGGT...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGACCTCGTCCACCCATTaGATGGCCTGCACCATCTTG +
Preference number: 5 (lower is better)
Translates to: PVREGGPAESYVQTQKAQTSSTH*MACTIL
Trigger: CAAGATGGTGCAGGCCATCAAATGGGTGGACGAGGT...CTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGACCCCTTGCGTGCGCTaGCATTCTCTGTACCTCCCA +
Preference number: 5 (lower is better)
Translates to: VREGGPAESYVQTQKAQKTPCVR*HSLYLP
Trigger: TGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGT...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGTGTGGTGGACACCCCTaGCGTGCGCTTGCATTCTCT +
Preference number: 5 (lower is better)
Translates to: VREGGPAESYVQTQKAQKCGGHP*RALAFS
Trigger: AGAGAATGCAAGCGCACGCAAGGGGTGTCCACCACA...CTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CTTCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAAAAGATGCCCCTTCTCTaGGGCTCCTGGTATGGGTCG +
Preference number: 5 (lower is better)
Translates to: LPEPGQLERAALQSPMSKKMPLL*GSWYGS
Trigger: CGACCCATACCAGGAGCCCAAGAGAAGGGGCATCTT...TTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000572995.5
CDS-3UTR CAA 90 bp TTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCTCCACTGTGCTTCATACTCCAACCTGTaGGTGATGATCCGCTGGACG +
Preference number: 5 (lower is better)
Translates to: FQAAGAVCPSHFRPLHCASYSNL*VMIRWT
Trigger: CGTCCAGCGGATCATCACCAACAGGTTGGAGTATGA...AGCACAGTGGAGAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CATAAGGAGAGTGGCGAAGCTGCCGGGAAGGAAGGCAAGCGTGTTTTCCTGGAGGCCAAGAGGGTCTCCTaGCTGAGTGGTTCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: HKESGEAAGKEGKRVFLEAKRVS*LSGSLV
Trigger: GACCAGGGAACCACTCAGCAAGGAGACCCTCTTGGC...CTCCAGGAAAACACGCTTGCCTTCCTTCCCGGCAGCTTCGCCACTCTCCTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS TCA 90 bp TCGTCCACCCATTTGATGGCCTGCACCATCTTGTATCTCTCCTCCTaGGTGAACACCGGGGGCCCCTTGTGCTTGGCGATCTCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: SSTHLMACTILYLSS*VNTGGPLCLAISSR
Trigger: CCTAGAGGAGATCGCCAAGCACAAGGGGCCCCCGGTGTTCACTCAGGAGGAGAGATACAAGATGGTGCAGGCCATCAAATGGGTGGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570388.5
CDS TCA 90 bp TATGGGTCGGAGCCATCCCTGTCAGGGATAATTTCTGTCTTGCCGTaGCACACCAGGTCCACCTGGAGAAGGAGTGGGGTCAGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: YGSEPSLSGIISVLP*HTRSTWRRSGVRSP
Trigger: AGGGCTCCTGACCCCACTCCTTCTCCAGGTGGACCTGGTGTGTCACGGCAAGACAGAAATTATCCCTGACAGGGATGGCTCCGACCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574343.5
CDS-3UTR CAA 90 bp GGAGCGGTGCGTTTCAGGCTGCAGGTGCCGTCTGCCCGTCTCACTTCCGGCCTCAAGTCACAGTTGTATTaGTCCAGGGTCTCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: GAVRFRLQVPSARLTSGLKSQLY*SRVSSV
Trigger: TACACTAGAGACCCTGGACAAATACAACTGTGACTT...GAGGCCGGAAGTGAGACGGGCAGACGGCACCTGCAGCCTGAAACGCACCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GTGCTTGGCGATCTCCTCATCGGTGTGCACGCCTACGATGAGGTAGTCACCCATACCCCTTGCGTGCGCTaGCATTCTCTGTACCTCCCA +
Preference number: 5 (lower is better)
Translates to: VLGDLLIGVHAYDEVVTHTPCVR*HSLYLP
Trigger: TGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGT...ATGGGTGACTACCTCATCGTAGGCGTGCACACCGATGAGGAGATCGCCAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CAA 90 bp CCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGTCATACTCCAACCTGTaGGTGATGATCCGCTGGACG +
Preference number: 5 (lower is better)
Translates to: PCRVLCPNAEGAEAEQGESYSNL*VMIRWT
Trigger: CGTCCAGCGGATCATCACCAACAGGTTGGAGTATGA...CTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS-3UTR CAA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGATCATACTCCAACCTGTaGGTGATGATCCGCTGGACG +
Preference number: 5 (lower is better)
Translates to: EPGQLERAALQSPMSKRRSYSNL*VMIRWT
Trigger: CGTCCAGCGGATCATCACCAACAGGTTGGAGTATGA...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
CDS GCA 90 bp GAGACAAGAAGGAACAGCATCTGGAGACCTGACCACCCCTCCTCATaGCTCAACAAACAGGTATGGGCAGGTGCCACAGAACTCGGGGTG +
Preference number: 5 (lower is better)
Translates to: ETRRNSIWRPDHPSS*LNKQVWAGATELGV
Trigger: CACCCCGAGTTCTGTGGCACCTGCCCATACCTGTTTGTTGAGGCATGAGGAGGGGTGGTCAGGTCTCCAGATGCTGTTCCTTCTTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572924.2
CDS-3UTR CAA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGTCATACTCCAACCTGTaGGTGATGATCCGCTGGACG +
Preference number: 5 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQSYSNL*VMIRWT
Trigger: CGTCCAGCGGATCATCACCAACAGGTTGGAGTATGA...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAACACAGAAGTCACAGTaGTATTTGTCCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: EPGQLERAALQSPMSKRRTQKSQ*YLSRVS
Trigger: AGAGACCCTGGACAAATACAACTGTGACTTCTGTGT...TCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp CTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGACACAGAAGTCACAGTaGTATTTGTCCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LQSPMSKRRRRRSRAGGGTQKSQ*YLSRVS
Trigger: AGAGACCCTGGACAAATACAACTGTGACTTCTGTGT...CCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp AGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGACACAGAAGTCACAGTaGTATTTGTCCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: RARPVREGGPAESYVQTQTQKSQ*YLSRVS
Trigger: AGAGACCCTGGACAAATACAACTGTGACTTCTGTGT...CTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp TCCAGAGCCAGGCCAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGACACAGAAGTCACAGTaGTATTTGTCCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: SRARPVREGGPAESYVQTTQKSQ*YLSRVS
Trigger: AGAGACCCTGGACAAATACAACTGTGACTTCTGTGT...CGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTGGCCTGGCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp AGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGACACAGAAGTCACAGTaGTATTTGTCCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: REGGPAESYVQTQKAQKQTQKSQ*YLSRVS
Trigger: AGAGACCCTGGACAAATACAACTGTGACTTCTGTGT...CTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp TGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGAAGCAGAGCAGGGGGAGGGCAAGTCACAGTTGTATTaGTCCAGGGTCTCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: CRVLCPNAEGAEAEQGEGKSQLY*SRVSSV
Trigger: TACACTAGAGACCCTGGACAAATACAACTGTGACTT...GCCCTCCCCCTGCTCTGCTTCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GGAATCTCCTCTGGCAACACCCTCACAGACACACCCAGTGACAATACTTTGCATACCCCTTGCGTGCGCTaGCATTCTCTGTACCTCCCA +
Preference number: 5 (lower is better)
Translates to: GISSGNTLTDTPSDNTLHTPCVR*HSLYLP
Trigger: TGGGAGGTACAGAGAATGCAAGCGCACGCAAGGGGT...ATGCAAAGTATTGTCACTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CAA 90 bp TTCCCCAGTGGGCATGAAAGAAATGAGGGCCCCACAAGCCACATGGACTCTGATTCATACTCCAACCTGTaGGTGATGATCCGCTGGACG +
Preference number: 5 (lower is better)
Translates to: FPSGHERNEGPTSHMDSDSYSNL*VMIRWT
Trigger: CGTCCAGCGGATCATCACCAACAGGTTGGAGTATGA...ATCAGAGTCCATGTGGCTTGTGGGGCCCTCATTTCTTTCATGCCCACTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CAA 90 bp ACTGTCTGCATACTCCCGGTACTCAGAGGACATCTCCTGGCTGCTGTGATGGGCACACAGAAGTCACAGTaGTATTTGTCCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: TVCILPVLRGHLLAAVMGTQKSQ*YLSRVS
Trigger: AGAGACCCTGGACAAATACAACTGTGACTTCTGTGT...GCCCATCACAGCAGCCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CAA 90 bp ACACCCTCTCTGAGCAGCTTTGCTGGAAAGAGCGGAGAGCCTGCTGCAAACCAGAAGTCACAGTTGTATTaGTCCAGGGTCTCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: TPSLSSFAGKSGEPAANQKSQLY*SRVSSV
Trigger: TACACTAGAGACCCTGGACAAATACAACTGTGACTT...CTGGTTTGCAGCAGGCTCTCCGCTCTTTCCAGCAAAGCTGCTCAGAGAGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570391.5
ENST00000571105.5
CDS-3UTR CAA 90 bp GATGTGGAACAGGTCGAAGGCACCAGCCACATAGATGACTGTCTCCCCTGGCTGAAGTCACAGTTGTATTaGTCCAGGGTCTCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: DVEQVEGTSHIDDCLPWLKSQLY*SRVSSV
Trigger: TACACTAGAGACCCTGGACAAATACAACTGTGACTT...CAGCCAGGGGAGACAGTCATCTATGTGGCTGGTGCCTTCGACCTGTTCCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS-3UTR CAA 90 bp TTCCCCAGTGGGCATGAAAGAAATGAGGGCCCCACAAGCCACATGGACTCTGATCCAGGCTTTATTCGGTaGTACCAAAGAGATTTCCGT +
Preference number: 5 (lower is better)
Translates to: FPSGHERNEGPTSHMDSDPGFIR*YQRDFR
Trigger: ACGGAAATCTCTTTGGTACAACCGAATAAAGCCTGG...ATCAGAGTCCATGTGGCTTGTGGGGCCCTCATTTCTTTCATGCCCACTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS-3UTR CAA 90 bp CAGTTAGAGAGGGCGGCCCTGCAGAGTCCTATGTCCAAACGCAGAAGGCGCAGATATATGAAGAGTTTATaGGGAGTATTGACTCACGTG +
Preference number: 5 (lower is better)
Translates to: QLERAALQSPMSKRRRRRYMKSL*GVLTHV
Trigger: CACGTGAGTCAATACTCCCAATAAACTCTTCATATA...TCTGCGCCTTCTGCGTTTGGACATAGGACTCTGCAGGGCCGCCCTCTCTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538936.7
CDS GCA 72 bp GTAGACGGGGTCGCCCACGGCAGGGCGCGGAGCCTCTaGAGCCCGACCCTCCCGGCAGGCGAGCCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: VDGVAHGRARSL*SPTLPAGEPRS
Trigger: GCTGCGGGGCTCGCCTGCCGGGAGGGTCGGGCTGCAGAGGCTCCGCGCCCTGCCGTGGGCGACCCCGTCTAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
CDS GCA 72 bp CAGGGAGGCCGTGGCTCCAGATCTCAGCGCGGTGGCTaGACCGGAGAGGTCGGCGTGACCGGGCGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: QGGRGSRSQRGG*TGEVGVTGRGL
Trigger: GAGGCCCCGCCCGGTCACGCCGACCTCTCCGGTGCAGCCACCGCGCTGAGATCTGGAGCCACGGCCTCCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573927.5
CDS TCA 72 bp GATCTCAGCGCGGTGGCTGCACCGGAGAGGTCGGCGTaGCCGGGCGGGGCCTCCGCCAGAGGTAGACGGGGT +
Preference number: 6 (lower is better)
Translates to: DLSAVAAPERSA*PGGASARGRRG
Trigger: ACCCCGTCTACCTCTGGCGGAGGCCCCGCCCGGTCACGCCGACCTCTCCGGTGCAGCCACCGCGCTGAGATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573927.5
CDS CCA 72 bp GAAGCAGGGAGGCCGTGGCTCCAGATCTCAGCGCGGTaGCTGCACCGGAGAGGTCGGCGTGACCGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: EAGRPWLQISAR*LHRRGRRDRAG
Trigger: CCCCGCCCGGTCACGCCGACCTCTCCGGTGCAGCCACCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573927.5
CDS CAA 90 bp GCCCGGAGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTaGCTGGTGGTTACGGAGAAGCAGGGAGGCCGTGGCTCCAGATCT +
Preference number: 6 (lower is better)
Translates to: ARRPGEPLDRSRASW*LVVTEKQGGRGSRS
Trigger: AGATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS CCA 72 bp CTACAGGGACGCTCGCCCGGAGGCCAGGGGAACCCCTaGACCGGAGCCGGGCAAGCTGGTTGCTGGTGGTTA +
Preference number: 6 (lower is better)
Translates to: LQGRSPGGQGNP*TGAGQAGCWWL
Trigger: TAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCTCCGGGCGAGCGTCCCTGTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS CAA 72 bp CCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTaGCTGGTGGTTACGGAGAAGCAGGGAGGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: PGEPLDRSRASW*LVVTEKQGGRG
Trigger: GCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS GCA 72 bp CAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTTaGTGGTGGTTACGGAGAAGCAGGGAGGCCGTGGCT +
Preference number: 6 (lower is better)
Translates to: QGNPWTGAGQAG*WWLRRSREAVA
Trigger: AGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS CCA 72 bp GGGAACCCCTGGACCGGAGCCGGGCAAGCTGGTTGCTaGTGGTTACGGAGAAGCAGGGAGGCCGTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: GNPWTGAGQAGC*WLRRSREAVAP
Trigger: TGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS CCA 72 bp AGGCCAGGGGAACCCCTGGACCGGAGCCGGGCAAGCTaGTTGCTGGTGGTTACGGAGAAGCAGGGAGGCCGT +
Preference number: 6 (lower is better)
Translates to: RPGEPLDRSRAS*LLVVTEKQGGR
Trigger: ACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTTCCCCTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS TCA 72 bp CCTCGGGGATTCCGCCGCCGACTCACCTGGCTGCTGTaGTGGGCTTTGGTTACCAGCAGCATGCGGCCCACG +
Preference number: 6 (lower is better)
Translates to: PRGFRRRLTWLL*WALVTSSMRPT
Trigger: CGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGTGAGTCGGCGGCGGAATCCCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571581.5
CDS GCA 72 bp AGGGGCCTCGGGGATTCCGCCGCCGACTCACCTGGCTaGTGTGATGGGCTTTGGTTACCAGCAGCATGCGGC +
Preference number: 6 (lower is better)
Translates to: RGLGDSAADSPG*CDGLWLPAACG
Trigger: GCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGGTGAGTCGGCGGCGGAATCCCCGAGGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571581.5
CDS CCA 72 bp TCCCAGCACCCAGCTGTAGCCACACAAGAGGGCCGGTaGGGGCAGGCTGTCTCTCTACCCTGGCCCTTAGCC +
Preference number: 6 (lower is better)
Translates to: SQHPAVATQEGR*GQAVSLPWPLA
Trigger: GGCTAAGGGCCAGGGTAGAGAGACAGCCTGCCCCCACCGGCCCTCTTGTGTGGCTACAGCTGGGTGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570388.5
CDS CCA 72 bp CTGGTTGCTGGTGGTTACGGAGAAGCAGGGAGGCCGTaGCTCCAGATCTCAGCGCGGTGGCTGCACCGGAGA +
Preference number: 6 (lower is better)
Translates to: LVAGGYGEAGRP*LQISARWLHRR
Trigger: TCTCCGGTGCAGCCACCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573927.5
CDS CCA 72 bp AACCCCTGGACCGGAGCCGGGCAAGCTGGTTGCTGGTaGTTACGGAGAAGCAGGGAGGCCGTGGCTCCAGAT +
Preference number: 6 (lower is better)
Translates to: NPWTGAGQAGCW*LRRSREAVAPD
Trigger: ATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAGCTTGCCCGGCTCCGGTCCAGGGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331285.7
ENST00000570391.5
ENST00000572157.1
ENST00000573401.6
ENST00000573927.5
CDS CCA 72 bp CTGGTTGCTGGTGGTTACGGAGAAGCAGGGAGGCCGTaGCTCCAGATCTCAGCGCGGTGGCAGCCATCGCAC +
Preference number: 6 (lower is better)
Translates to: LVAGGYGEAGRP*LQISARWQPSH
Trigger: GTGCGATGGCTGCCACCGCGCTGAGATCTGGAGCCACGGCCTCCCTGCTTCTCCGTAACCACCAGCAACCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573401.6
CDS GCA 72 bp ACTGGCTGCTGTGATGGGCTTTGGTTACCAGCAGCATaGGGCCCACGAGGTCTGTGGTGGACACCCCTTGCG +
Preference number: 6 (lower is better)
Translates to: TGCCDGLWLPAA*GPRGLWWTPLA
Trigger: CGCAAGGGGTGTCCACCACAGACCTCGTGGGCCGCATGCTGCTGGTAACCAAAGCCCATCACAGCAGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573636.6
CDS TCA 72 bp GAACGAGGTGAGCCCATGCGGAGCCTCACCTTGAAGTaGCTTAGGAGCTCTGCTGTGACCGCGTACGGGGCT +
Preference number: 6 (lower is better)
Translates to: ERGEPMRSLTLK*LRSSAVTAYGA
Trigger: AGCCCCGTACGCGGTCACAGCAGAGCTCCTAAGTCACTTCAAGGTGAGGCTCCGCATGGGCTCACCTCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571944.1
CDS TCA 72 bp CTTGTATCTCTCCTCCATCGGTGTGCACGCCTACGATaGGGTAGTCACCCATGGCCCGTGCCTGGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: LVSLLHRCARLR*GSHPWPVPGAA
Trigger: AGCTGCGCCAGGCACGGGCCATGGGTGACTACCTCATCGTAGGCGTGCACACCGATGGAGGAGAGATACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572157.1
CDS CCA 72 bp TCTACCCTGGCCCTTAGCCCACTAGTGCTGGCCAACTaGGTGGCTCTCTTCCCTGCGAGGGTCTCAGGCAAA +
Preference number: 6 (lower is better)
Translates to: STLALSPLVLAN*VALFPARVSGK
Trigger: TTTGCCTGAGACCCTCGCAGGGAAGAGAGCCACCCAGTTGGCCAGCACTAGTGGGCTAAGGGCCAGGGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331285.7
ENST00000570388.5
CDS GCA 72 bp GGGGTTCCGCCCACCAGGGCACTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGAGGACATCTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: GVPPTRALAKTV*ILPVLRGHLLA
Trigger: AGCCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGCGGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331285.7
ENST00000538936.7
ENST00000570388.5
ENST00000570391.5
ENST00000571105.5
ENST00000572995.5
ENST00000576343.5
CDS GCA 72 bp GGGGTTCCGCCCACCAGGGCACTTGCCAAAACTGTCTaGATACTCCCGGTACTCAGAGGACATCTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: GVPPTRALAKTV*ILPVLRGHLLH
Trigger: GTGCAGGAGATGTCCTCTGAGTACCGGGAGTATGCAGACAGTTTTGGCAAGTGCCCTGGTGGGCGGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571581.5
CDS CCA 72 bp CGCGCCTCATACTCCAACCTGTTGGTGATGATCCGCTaGACGATGAGGTCTGTGGTGAGGTTGCTGCCACTG +
Preference number: 6 (lower is better)
Translates to: RASYSNLLVMIR*TMRSVVRLLPL
Trigger: CAGTGGCAGCAACCTCACCACAGACCTCATCGTCCAGCGGATCATCACCAACAGGTTGGAGTATGAGGCGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570388.5
ENST00000570391.5
ENST00000571105.5
ENST00000572924.2
ENST00000572995.5
ENST00000574343.5
ENST00000576343.5
CDS TCA 72 bp GAGCCATCCCTGTCAGGGATAATTTCTGTCTTGCCGTaGCACACCAGGTCCACCTGGAGAAGGAGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: EPSLSGIISVLP*HTRSTWRRSGV
Trigger: GACCCCACTCCTTCTCCAGGTGGACCTGGTGTGTCACGGCAAGACAGAAATTATCCCTGACAGGGATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574343.5
CDS TCA 72 bp CTTCTGACACGTACTGGTCAAAGTGTAAGCCCGCGATaGTGTAGGGCCTCTCTGCCAGCCTGTGCACCTTCT +
Preference number: 6 (lower is better)
Translates to: LLTRTGQSVSPR*CRASLPACAPS
Trigger: AGAAGGTGCACAGGCTGGCAGAGAGGCCCTACATCATCGCGGGCTTACACTTTGACCAGTACGTGTCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572995.5
CDS CCA 72 bp CTGGGGCTCCTCCATGAGACAAGAAGGAACAGCATCTaGAGACCTGACCACCCCTCCTCATGCCTCAACAAA +
Preference number: 6 (lower is better)
Translates to: LGLLHETRRNSI*RPDHPSSCLNK
Trigger: TTTGTTGAGGCATGAGGAGGGGTGGTCAGGTCTCCAGATGCTGTTCCTTCTTGTCTCATGGAGGAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572924.2
CDS CAA 72 bp ACCACCTCGTCCACCCATTTGATGGCCTGCACCATCTaGTATCTCTCCTCCATCGGTGTGCACGCCTACGAT +
Preference number: 6 (lower is better)
Translates to: TTSSTHLMACTI*YLSSIGVHAYD
Trigger: ATCGTAGGCGTGCACACCGATGGAGGAGAGATACAAGATGGTGCAGGCCATCAAATGGGTGGACGAGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572157.1
CDS TCA 72 bp ATGAGGTCTGTGGTGAGGTTGCTGCCACTGTCAATCTaGCGGAAGATGCCCCTTCTCTTGGGCTCCTGGTAT +
Preference number: 6 (lower is better)
Translates to: MRSVVRLLPLSI*RKMPLLLGSWY
Trigger: ATACCAGGAGCCCAAGAGAAGGGGCATCTTCCGTCAGATTGACAGTGGCAGCAACCTCACCACAGACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331285.7
ENST00000538721.6
ENST00000538936.7
ENST00000570388.5
ENST00000570391.5
ENST00000572924.2
ENST00000572995.5
ENST00000574343.5
ENST00000576343.5
CDS TCA 72 bp ATGAGGTCTGTGGTGAGGTTGCTGCCACTGTCAATCTaGCGGAAGATGCCCCTTCTCTTGGGCTCCTTGAAG +
Preference number: 6 (lower is better)
Translates to: MRSVVRLLPLSI*RKMPLLLGSLK
Trigger: CTTCAAGGAGCCCAAGAGAAGGGGCATCTTCCGTCAGATTGACAGTGGCAGCAACCTCACCACAGACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571105.5