RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCYOX1L (Homo sapiens)

Ensembl gene IDs: ENSG00000145882

Ensembl transcript IDs: ENST00000274569.9, ENST00000503240.5, ENST00000505669.5, ENST00000507621.1, ENST00000510990.6, ENST00000511945.5, ENST00000514349.1

Found 624 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTaGTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGG +
Preference number: 1 (lower is better)
Translates to: RKRFSRYQSVSSSMK*SPPKMALLPTTSRR
Trigger: CCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
3UTR TCA 90 bp AGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATaGAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGC +
Preference number: 1 (lower is better)
Translates to: RGGRGSAGTSQSPPA*SAPRRRWRSCPPPR
Trigger: GCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
3UTR CCA 90 bp CGAAAGAGGGGCTTGGGGGACTGGACTCGCCAAACAGCTGCCTCCTaGGGCTGCTTTCGCCGGAAGCTGGCAGAGATGTTGACAGGGCAG +
Preference number: 1 (lower is better)
Translates to: RKRGLGDWTRQTAAS*GCFRRKLAEMLTGQ
Trigger: CTGCCCTGTCAACATCTCTGCCAGCTTCCGGCGAAAGCAGCCCCAGGAGGCAGCTGTTTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR CCA 90 bp CTAGGTCCTGGTACCAGCGGTTGTAAGCCAGCAAGGCCACATTCTTaGCAGCCACGGCCATCACCTCCACGGAGCTGGCCGCCCACTCCA +
Preference number: 1 (lower is better)
Translates to: LGPGTSGCKPARPHS*QPRPSPPRSWPPTP
Trigger: TGGAGTGGGCGGCCAGCTCCGTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAACCGCTGGTACCAGGACCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR GCA 90 bp AACCGGAACAAACCAGCTTATTGCCTCCTTCCACAGACCACAGGCTaGCTTGGGCCCCGGCTAGTGACATGGCTCCTGCAAAGGCGGGCA +
Preference number: 1 (lower is better)
Translates to: NRNKPAYCLLPQTTG*LGPRLVTWLLQRRA
Trigger: TGCCCGCCTTTGCAGGAGCCATGTCACTAGCCGGGGCCCAAGGCAGCCTGTGGTCTGTGGAAGGAGGCAATAAGCTGGTTTGTTCCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR TCA 90 bp AGCCACAGAGTGCTGGGTCATGTTAACAAAGGTGGACTCCCCCAGTaGGTAGAGCAGCTCCTCCACACCCGAGAAGGCATAGCCGTGGGC +
Preference number: 1 (lower is better)
Translates to: SHRVLGHVNKGGLPQ*VEQLLHTREGIAVG
Trigger: GCCCACGGCTATGCCTTCTCGGGTGTGGAGGAGCTGCTCTACTCACTGGGGGAGTCCACCTTTGTTAACATGACCCAGCACTCTGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511945.5
3UTR CCA 90 bp CCAAGGAGACGACGGTGGGCTGGAAAGAGCCCTGCACGTCATCAATaGGCGGGTGGAAGCCTGCAAAGGTTAAGTTGCTGCTGCTGTTGT +
Preference number: 1 (lower is better)
Translates to: PRRRRWAGKSPARHQ*AGGSLQRLSCCCCC
Trigger: ACAACAGCAGCAGCAACTTAACCTTTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGGGCTCTTTCCAGCCCACCGTCGTCTCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR CCA 90 bp AGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTaGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCTCTC +
Preference number: 1 (lower is better)
Translates to: RSLVGEHGLFSPGLL*DDPSSVGDESSQAL
Trigger: GAGAGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR GCA 90 bp CAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTaGTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: QKEAWWASMAYSVLG*CGMIHLQWGMKVPR
Trigger: CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR TCA 90 bp GCAGGGTCACAGAGGTCACTGTGGCATGGATCACATTGGCCTTGGTaGGCTTCAGCAAACCGGAACAAACCAGCTTATTGCCTCCTTCCA +
Preference number: 1 (lower is better)
Translates to: AGSQRSLWHGSHWPW*ASANRNKPAYCLLP
Trigger: TGGAAGGAGGCAATAAGCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACCTCTGTGACCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR GCA 90 bp ACAGCAGAAACGACATCATCAATAAAGCGCTGCGTGACGCCCACCTaGAGCAGGGACTCAGCCACAGAGTGCTGGGTCATGTTAACAAAG +
Preference number: 1 (lower is better)
Translates to: TAETTSSIKRCVTPT*SRDSATECWVMLTK
Trigger: CTTTGTTAACATGACCCAGCACTCTGTGGCTGAGTCCCTGCTGCAGGTGGGCGTCACGCAGCGCTTTATTGATGATGTCGTTTCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511945.5
3UTR CCA 90 bp CCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTaGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGG +
Preference number: 1 (lower is better)
Translates to: PTASHVSFPTGCQEA*RYGDDYSGTHLFLG
Trigger: CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR CCA 90 bp GAAATCTGTGGTAAGGATGTTGGCAAAGGGGAAAAGCTTAGGGTCTaGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGA +
Preference number: 1 (lower is better)
Translates to: EICGKDVGKGEKLRV*ETEVGRVEVAVDQG
Trigger: TCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTCCCCTTTGCCAACATCCTTACCACAGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR TCA 90 bp GCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTaGCGACTATTCAGGCACACATCTCTTCCTTGGGTCCTACCACAG +
Preference number: 1 (lower is better)
Translates to: ACFFSHWLPGSLEIW*RLFRHTSLPWVLPQ
Trigger: CTGTGGTAGGACCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR TCA 90 bp TATGCAGTGATGTTGACAGGCTTGGAGATGGTGACTAGGGAGTTCTaGACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGC +
Preference number: 1 (lower is better)
Translates to: YAVMLTGLEMVTREF*TRYFKSIKSTVTRS
Trigger: GCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGTTCAGAACTCCCTAGTCACCATCTCCAAGCCTGTCAACATCACTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR GCA 90 bp TTCCTCAATCTTTGCATAAGGAAGAGAATGGCTAATTCCTCTAGGTaGCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTT +
Preference number: 1 (lower is better)
Translates to: FLNLCIRKRMANSSR*QGRASLFLQPRMFL
Trigger: AAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCTTATGCAAAGATTGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR CCA 90 bp ATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTaGTTTCTAGCTAAGAAACCAAGTCTGAAGCACCTTGTGAAGATG +
Preference number: 1 (lower is better)
Translates to: IRLIVLCLIFPPVVF*FLAKKPSLKHLVKM
Trigger: CATCTTCACAAGGTGCTTCAGACTTGGTTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR GCA 90 bp CATCTGGGGACTTCTCTTCTTTATATTGTTGCATTCCTCAATCTTTaGATAAGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGA +
Preference number: 1 (lower is better)
Translates to: HLGTSLLYIVAFLNL*IRKRMANSSRCQGR
Trigger: TCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCTTATGCAAAGATTGAGGAATGCAACAATATAAAGAAGAGAAGTCCCCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR GCA 90 bp TCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTaGTCTCTACCATCTGGGGACTTCTCTTCTTTATATTGTTGCATT +
Preference number: 1 (lower is better)
Translates to: SSFFCWDEHLGVRYD*SLPSGDFSSLYCCI
Trigger: AATGCAACAATATAAAGAAGAGAAGTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp GCTGGTCATGGAGTGCAAACCTCGGGAGCGTGGGGCGGGAGCCATAGAGGGGATCGAAGATGGCGCTCCTaGCCACCACCTCGCGCCGGT +
Preference number: 2 (lower is better)
Translates to: AGHGVQTSGAWGGSHRGDRRWRS*PPPRAG
Trigger: ACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCG...ATCCCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTGCACTCCATGACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATACCACCTCGCGCCGGTaGCTCAGCCCCAGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHTTSRR*LSPSSL
Trigger: CAAGCTGCTGGGGCTGAGGCACCGGCGCGAGGTGGT...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp AATAGGAACGGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGGCTTGGGGGACTGGCGGGCATCGCTGCTaGCTGGCCATAGCTGGCCCG +
Preference number: 2 (lower is better)
Translates to: NRNGTGSLAGSERGAWGTGGHRC*LAIAGP
Trigger: CGGGCCAGCTATGGCCAGTCAGCAGCGATGCCCGCC...AGTCCCCCAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTTCCGTTCCTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511945.5
3UTR-3UTR GCA 90 bp GATGCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCGAAGATGGCGCTCCTaGCCACCACCTCGCGCCGGT +
Preference number: 2 (lower is better)
Translates to: DAIVPPEAEEVQQVPVSLRRWRS*PPPRAG
Trigger: ACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCG...GAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGCATC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
3UTR-3UTR GCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGCTGCCTCCTGGGGCTaGTTTCGCCGGAAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHAASWG*FRRKLA
Trigger: TGCCAGCTTCCGGCGAAAGCAGCCCCAGGAGGCAGC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp TCTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGGGTGGACTCCCCCAGTaGGTAGAGCAGCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: SHTPPGTGLSPLCCAGSQGGLPQ*VEQLLH
Trigger: GTGGAGGAGCTGCTCTACTCACTGGGGGAGTCCACC...CTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511945.5
3UTR-3UTR GCA 90 bp GGTCATGGAGTGCAAACCTCGGGAGCGTGGGGCGGGAGCCATAGAGGGGATGGGAGGTTAAGTTGCTGCTaGTGTTGTCCAGGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: GHGVQTSGAWGGSHRGDGRLSCC*CCPGAG
Trigger: CCCTGCACCTGGACAACAGCAGCAGCAACTTAACCT...CCCATCCCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTGCACTCCATGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GGTCATGGAGTGCAAACCTCGGGAGCGTGGGGCGGGAGCCATAGAGGGGATGGGCAGGCTTGGAGATGGTaGCTAGGGAGTTCTGAACTA +
Preference number: 2 (lower is better)
Translates to: GHGVQTSGAWGGSHRGDGQAWRW*LGSSEL
Trigger: TAGTTCAGAACTCCCTAGTCACCATCTCCAAGCCTG...CCCATCCCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTGCACTCCATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATTCCTCCAGCATGAAGTaGTCCCCGCCGAAGATGGCG +
Preference number: 2 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHSSSMK*SPPKMA
Trigger: CGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGA...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGGAGCTGGTCATGGAGTaGAAACCTCGGGAGCGTGGG +
Preference number: 2 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLELVME*KPRERG
Trigger: CCCACGCTCCCGAGGTTTGCACTCCATGACCAGCTC...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGAGACGACCCCCGGCTAGTGACATaGCTCCTGCAAAGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: VWETEVGRVEVAVDQGDDPRLVT*LLQRRA
Trigger: TGCCCGCCTTTGCAGGAGCCATGTCACTAGCCGGGG...GTCGTCTCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTCAGCCCCAGCAGCTTaGCGAAGTCCTGCATGTGCA +
Preference number: 2 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLSAPAA*RSPACA
Trigger: TGCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGA...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp GGTCACTGTGGCATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACACCACAGACCACAGGCTaGCTTGGGCCCCGGCTAGTG +
Preference number: 2 (lower is better)
Translates to: GHCGMDHIGLGELQQTGTPQTTG*LGPRLV
Trigger: CACTAGCCGGGGCCCAAGGCAGCCTGTGGTCTGTGG...TGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp TCTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGCCTGGTGGGCGAGCATaGCTTATTCAGTCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: SHTPPGTGLSPLCCAGSQPGGRA*LIQSWA
Trigger: AGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGG...CTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp TCTGCACTGAGTAATAGGAACGGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGGCTCCCCGCCGAAGATaGCGCTCCTGCCCACCACCT +
Preference number: 2 (lower is better)
Translates to: SALSNRNGTGSLAGSERGAPRRR*RSCPPP
Trigger: AGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGC...CCCTCTTTCGGACCCAGCTAAAGACCCTGTTCCGTTCCTATTACTCAGTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCAAACCTCGGGAGCGTaGGGCGGGAGCCATAGAGGG +
Preference number: 2 (lower is better)
Translates to: ASLFLQPRMFLFPLVARKQTSGA*GGSHRG
Trigger: CCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTG...CTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR CAA 90 bp ACAGCTGCCTCCTGGGGCTGCTTTCGCCGGAAGCTGGCAGAGATGTaGACAGGGCAGATGTTGTCCAGAGTGCAGAAGAAGCTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: TAASWGCFRRKLAEM*TGQMLSRVQKKLGK
Trigger: TTTCCCCAGCTTCTTCTGCACTCTGGACAACATCTGCCCTGTCAACATCTCTGCCAGCTTCCGGCGAAAGCAGCCCCAGGAGGCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp GGTCATGGAGTGCAAACCTCGGGAGCGTGGGGCGGGAGCCATAGAGGGGATGGGAGAAGTCAGAGCTGTTaGCTACCTCATTCTCATACG +
Preference number: 2 (lower is better)
Translates to: GHGVQTSGAWGGSHRGDGRSQSC*LPHSHT
Trigger: CGTATGAGAATGAGGTAGGCAACAGCTCTGACTTCT...CCCATCCCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTGCACTCCATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGCAGCAGCCGCCGTGTaGACCCTTAATATAGGCAGA +
Preference number: 2 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHAAAAV*TLNIGR
Trigger: TCTGCCTATATTAAGGGTCCACACGGCGGCTGCTGC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp GCGGTTGTAAGCCAGCAAGGCCACATTCTTGGCAGCCACGGCCATCACCTCCACTTCTCATACGCCACCTaGTACAGGGCTTTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: AVVSQQGHILGSHGHHLHFSYAT*YRAFPS
Trigger: AGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAA...GTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GGTTGTAAGCCAGCAAGGCCACATTCTTGGCAGCCACGGCCATCACCTCCACGGTTCTCATACGCCACCTaGTACAGGGCTTTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: GCKPARPHSWQPRPSPPRFSYAT*YRAFPS
Trigger: AGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAA...CCGTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTTCCGAAAGAGGGGCTTaGGGGACTGGACTCGCCAAA +
Preference number: 2 (lower is better)
Translates to: GQKEAWWASMAYSVLGCCSERGA*GTGLAK
Trigger: TTTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGA...ACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGATCTTCAGTGGGGGATaGAAGTTCCCAGGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRIFSGG*KFPGSP
Trigger: GGGAGAGCCTGGGAACTTTCATCCCCCACTGAAGAT...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp GTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGAGACGACATCTTCAGTGGGGGATaGAAGTTCCCAGGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: VWETEVGRVEVAVDQGDDIFSGG*KFPGSP
Trigger: GGGAGAGCCTGGGAACTTTCATCCCCCACTGAAGAT...GTCGTCTCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATACCACCTCGCGCCGGTaGCTCAGCCCCAGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDTTSRR*LSPSSL
Trigger: CAAGCTGCTGGGGCTGAGGCACCGGCGCGAGGTGGT...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCAGTCCTGGGCTGCTGTaGGATGATCCATCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: EAWWASMAYSVLGCCGMISPGLL*DDPSSV
Trigger: CACTGAAGATGGATCATCCCACAGCAGCCCAGGACT...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp CTTAGGGTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGACCTGGTGGGCGAGCATaGCTTATTCAGTCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: LRVWETEVGRVEVAVDQGPGGRA*LIQSWA
Trigger: AGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGG...TCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp CTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGAGGTCAGAAAGAAGCCTaGTGGGCGAGCATGGCTTAT +
Preference number: 2 (lower is better)
Translates to: LIRHLVQGFPLCAVQGHRGQKEA*WASMAY
Trigger: ATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC...TCTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCGGTCAGAAAGAAGCCTaGTGGGCGAGCATGGCTTAT +
Preference number: 2 (lower is better)
Translates to: EAWWASMAYSVLGCCGMIGQKEA*WASMAY
Trigger: ATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp GTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGAGACGACGCAGCAGCCGCCGTGTaGACCCTTAATATAGGCAGA +
Preference number: 2 (lower is better)
Translates to: VWETEVGRVEVAVDQGDDAAAAV*TLNIGR
Trigger: TCTGCCTATATTAAGGGTCCACACGGCGGCTGCTGC...GTCGTCTCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GGTTGTAAGCCAGCAAGGCCACATTCTTGGCAGCCACGGCCATCACCTCCACGGTCACAGAGGTCACTGTaGCATGGATCACATTGGCCT +
Preference number: 2 (lower is better)
Translates to: GCKPARPHSWQPRPSPPRSQRSL*HGSHWP
Trigger: AGGCCAATGTGATCCATGCCACAGTGACCTCTGTGA...CCGTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GGGGATGGGCCTGCCACTCAGCTGTCTGCACTGAGTAATAGGAACGGAACAGGGCAGGCTTGGAGATGGTaGCTAGGGAGTTCTGAACTA +
Preference number: 2 (lower is better)
Translates to: GDGPATQLSALSNRNGTGQAWRW*LGSSEL
Trigger: TAGTTCAGAACTCCCTAGTCACCATCTCCAAGCCTG...CCCTGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAGTGGCAGGCCCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GCGGTTGTAAGCCAGCAAGGCCACATTCTTGGCAGCCACGGCCATCACCTCCACTCTAGGGGTAAGATATaGCTGCTCTCTACCATCTGG +
Preference number: 2 (lower is better)
Translates to: AVVSQQGHILGSHGHHLHSRGKI*LLSTIW
Trigger: CCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGA...GTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTACCAGGCTAACCTCTaGAGAATCCTACCCCAACAC +
Preference number: 2 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLYQANL*RILPQH
Trigger: GTGTTGGGGTAGGATTCTTCAGAGGTTAGCCTGGTA...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGGCTAATTCCTCTAGGTaGCAAGGAAGAGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLANSSR*QGRASL
Trigger: GAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGC...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp GAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCTGGGGACTTCTCTTCTCGAAGATGGCGCTCCTaGCCACCACCTCGCGCCGGT +
Preference number: 2 (lower is better)
Translates to: EHLGVRYDCSLPSGDFSSRRWRS*PPPRAG
Trigger: ACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCG...AGAAGAGAAGTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp CTCATTCTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTAGTCCTGGGCTGCTGTaGGATGATCCATCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: LILIRHLVQGFPLCAVQGSPGLL*DDPSSV
Trigger: CACTGAAGATGGATCATCCCACAGCAGCCCAGGACT...ACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACCCTGGTGGGCGAGCATaGCTTATTCAGTCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: GAKEELPSSYSLACFFSHPGGRA*LIQSWA
Trigger: AGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGG...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp CTCATTCTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTGAGGTCACTGTGGCATaGATCACATTGGCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: LILIRHLVQGFPLCAVQGEVTVA*ITLALV
Trigger: CACCAAGGCCAATGTGATCCATGCCACAGTGACCTC...ACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGGCAAGGCCACATTCTTaGCAGCCACGGCCATCACCT +
Preference number: 2 (lower is better)
Translates to: ASLFLQPRMFLFPLVARKARPHS*QPRPSP
Trigger: AGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGC...CTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GAAAAGCTTAGGGTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACATCTTCAGTGGGGGATaGAAGTTCCCAGGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: EKLRVWETEVGRVEVAVDIFSGG*KFPGSP
Trigger: GGGAGAGCCTGGGAACTTTCATCCCCCACTGAAGAT...GTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTCACCTGGAGATGCTTaGTACATGAGGGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLSPGDA*YMRGQK
Trigger: TTTCTGACCCCTCATGTATCAAGCATCTCCAGGTGA...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATAGCTTGGAGATATGGTaGCGACTATTCAGGCACACA +
Preference number: 2 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHSLEIW*RLFRHT
Trigger: TGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCT...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTCTAGGGGTAAGATATaGCTGCTCTCTACCATCTGG +
Preference number: 2 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLSRGKI*LLSTIW
Trigger: CCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGA...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp TGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCAACGAAGTCCTGCATGTaGAGGCTCAGGGAGTGGAAG +
Preference number: 2 (lower is better)
Translates to: WLIPLGAKEELPSSYSLATKSCM*RLREWK
Trigger: CTTCCACTCCCTGAGCCTGCACATGCAGGACTTCGT...TGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp GGTCACTGTGGCATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACAAGCTTGACGAAGTCCTaGATGTGCAGGCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: GHCGMDHIGLGELQQTGTSLTKS*MCRLRE
Trigger: CTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCT...TGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp CTCATTCTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCAGAAAGAAGCCTGGTaGGCGAGCATGGCTTATTCA +
Preference number: 2 (lower is better)
Translates to: LILIRHLVQGFPLCAVQGQKEAW*ASMAYS
Trigger: TGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTG...ACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACGCAGCAGCCGCCGTGTaGACCCTTAATATAGGCAGA +
Preference number: 2 (lower is better)
Translates to: GAKEELPSSYSLACFFSHAAAAV*TLNIGR
Trigger: TCTGCCTATATTAAGGGTCCACACGGCGGCTGCTGC...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR CAA 90 bp CTGTGCAGGGTCACAGAGGTCACTGTGGCATGGATCACATTGGCCTaGGTGAGCTTCAGCAAACCGGAACAAACCAGCTTATTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LCRVTEVTVAWITLA*VSFSKPEQTSLLPP
Trigger: AGGAGGCAATAAGCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACCTCTGTGACCCTGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGAGATGCTTGATACATaGGGGGTCAGAAAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: GQKEAWWASMAYSVLGCCEMLDT*GVRKKP
Trigger: AGGCTTCTTTCTGACCCCTCATGTATCAAGCATCTC...ACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp AGAGGGGATGGGCCTGCCACTCAGCTGTCTGCACTGAGTAATAGGAACGGAACAGCTAATTCCTCTAGGTaGCAAGGAAGAGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: RGDGPATQLSALSNRNGTANSSR*QGRASL
Trigger: GAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGC...TGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAGTGGCAGGCCCATCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATTCCTCCAGCATGAAGTaGTCCCCGCCGAAGATGGCG +
Preference number: 2 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDSSSMK*SPPKMA
Trigger: CGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGA...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGATGATCCATCTTCAGTaGGGGATGAAAGTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRMIHLQ*GMKVPR
Trigger: CCTGGGAACTTTCATCCCCCACTGAAGATGGATCAT...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGGGTTGCCAGGAAGCTTaGAGATATGGTGACGACTAT +
Preference number: 2 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRGCQEA*RYGDDY
Trigger: ATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACC...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGACCACAGGCTGCCTTaGGCCCCGGCTAGTGACATG +
Preference number: 2 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVDHRLP*APASDM
Trigger: CATGTCACTAGCCGGGGCCCAAGGCAGCCTGTGGTC...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR CAA 90 bp TCTGTGCTGTGCAGGGTCACAGAGGTCACTGTGGCATGGATCACATaGGCCTTGGTGAGCTTCAGCAAACCGGAACAAACCAGCTTATTG +
Preference number: 2 (lower is better)
Translates to: SVLCRVTEVTVAWIT*ALVSFSKPEQTSLL
Trigger: CAATAAGCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACCTCTGTGACCCTGCACAGCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTCAGTCTCCTCCAGCATaGAGTGCTCCCCGCCGAAGA +
Preference number: 2 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVQSPPA*SAPRRR
Trigger: TCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTG...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp CTTAGGGTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGATATTCAGTCCTGGGCTaGTGTGGGATGATCCATCTT +
Preference number: 2 (lower is better)
Translates to: LRVWETEVGRVEVAVDQGYSVLG*CGMIHL
Trigger: AAGATGGATCATCCCACAGCAGCCCAGGACTGAATA...TCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp TGGAAAGAGCCCTGCACGTCATCAATGGGCGGGTGGAAGCCTGCAAAGGTTAAGGACTCAGCCACAGAGTaGTGGGTCATGTTAACAAAG +
Preference number: 2 (lower is better)
Translates to: WKEPCTSSMGGWKPAKVKDSATE*WVMLTK
Trigger: CTTTGTTAACATGACCCAGCACTCTGTGGCTGAGTC...CTTAACCTTTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGGGCTCTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511945.5
3UTR-3UTR CCA 90 bp CATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGCCTGGTGGGCGAGCATaGCTTATTCAGTCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: HLFLGSYHSHLLQYAVMLPGGRA*LIQSWA
Trigger: AGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGG...CAACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCACCCCGGCTAGTGACATaGCTCCTGCAAAGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPPRLVT*LLQRRA
Trigger: TGCCCGCCTTTGCAGGAGCCATGTCACTAGCCGGGG...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp CATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGATCTTCAGTGGGGGATaGAAGTTCCCAGGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: HLFLGSYHSHLLQYAVMLIFSGG*KFPGSP
Trigger: GGGAGAGCCTGGGAACTTTCATCCCCCACTGAAGAT...CAACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTCACCTGGAGATGCTTaGTACATGAGGGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: GAKEELPSSYSLACFFSHSPGDA*YMRGQK
Trigger: TTTCTGACCCCTCATGTATCAAGCATCTCCAGGTGA...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCGGGGTAAGATATGACTaGTCTCTACCATCTGGGGAC +
Preference number: 2 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIGVRYD*SLPSGD
Trigger: GTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCC...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp AGAGGGGATGGGCCTGCCACTCAGCTGTCTGCACTGAGTAATAGGAACGGAACACCTTCTTCTTTCTTCTaGTGGGATGAACATCTAGGG +
Preference number: 2 (lower is better)
Translates to: RGDGPATQLSALSNRNGTPSSFF*WDEHLG
Trigger: CCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG...TGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAGTGGCAGGCCCATCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACCTGCAAAGGTTAAGTTaGTGCTGCTGTTGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: GAKEELPSSYSLACFFSHLQRLS*CCCCPG
Trigger: ACCTGGACAACAGCAGCAGCAACTTAACCTTTGCAG...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGGTTGCCAGGAAGCTTaGAGATATGGTGACGACTAT +
Preference number: 2 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLGCQEA*RYGDDY
Trigger: ATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACC...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGTGTTTCTTTTCCCACTaGTTGCCAGGAAGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLCFFSH*LPGSLE
Trigger: CTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACA...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTCAAACCTCGGGAGCGTaGGGCGGGAGCCATAGAGGG +
Preference number: 2 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPQTSGA*GGSHRG
Trigger: CCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTG...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCGAGATGCTTGATACATaGGGGGTCAGAAAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIEMLDT*GVRKKP
Trigger: AGGCTTCTTTCTGACCCCTCATGTATCAAGCATCTC...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATTGCATCAAATCTTTTTaGTCAATCTTGTCTAGGTCC +
Preference number: 2 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHCIKSF*SILSRS
Trigger: GGACCTAGACAAGATTGATCAAAAAGATTTGATGCA...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp TTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACTATTCAGTCCTGGGCTaGTGTGGGATGATCCATCTT +
Preference number: 2 (lower is better)
Translates to: FPLVARKLGDMVTTIQAHYSVLG*CGMIHL
Trigger: AAGATGGATCATCCCACAGCAGCCCAGGACTGAATA...GTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp TCTGCACTGAGTAATAGGAACGGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGTGTTTCTTTTCCCACTaGTTGCCAGGAAGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: SALSNRNGTGSLAGSERGCFFSH*LPGSLE
Trigger: CTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACA...CCCTCTTTCGGACCCAGCTAAAGACCCTGTTCCGTTCCTATTACTCAGTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp GGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTAGTAACCAGGAGCTATaGTCATTTCTTAGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: GQKEAWWASMAYSVLGCCSNQEL*SFLRFS
Trigger: AGAAAACCTAAGAAATGATCATAGCTCCTGGTTACT...ACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp TCTGCACTGAGTAATAGGAACGGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGTCTTTTCCCACTGGTTaGCAGGAAGCTTGGAGATAT +
Preference number: 2 (lower is better)
Translates to: SALSNRNGTGSLAGSERGSFPTG*QEAWRY
Trigger: ATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGA...CCCTCTTTCGGACCCAGCTAAAGACCCTGTTCCGTTCCTATTACTCAGTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp AGAGGGGATGGGCCTGCCACTCAGCTGTCTGCACTGAGTAATAGGAACGGAACAGCATTCCTCAATCTTTaGATAAGGAAGAGAATGGCT +
Preference number: 2 (lower is better)
Translates to: RGDGPATQLSALSNRNGTAFLNL*IRKRMA
Trigger: AGCCATTCTCTTCCTTATGCAAAGATTGAGGAATGC...TGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAGTGGCAGGCCCATCCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGGTCAGAAAGAAGCCTaGTGGGCGAGCATGGCTTAT +
Preference number: 2 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVGQKEA*WASMAY
Trigger: ATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp ATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACAAACCAGCTTATTGGTCAGAAAGAAGCCTaGTGGGCGAGCATGGCTTAT +
Preference number: 2 (lower is better)
Translates to: MDHIGLGELQQTGTNQLIGQKEA*WASMAY
Trigger: ATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC...AATAAGCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTGGGCTGCTGTGGGATaGTCCATCTTCAGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFWAAVG*SIFSGG
Trigger: TCCCCCACTGAAGATGGATCATCCCACAGCAGCCCA...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGCCTCCCGTAGTCTTCTaGTTTCTAGCTAAGAAACCA +
Preference number: 2 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGPPVVF*FLAKKP
Trigger: TGGTTTCTTAGCTAGAAACCAGAAGACTACGGGAGG...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCTTTCTTCTGCTaGGATGAACATCTAGGGGTA +
Preference number: 2 (lower is better)
Translates to: PLVARKLGDMVTTIQAHISSFFC*DEHLGV
Trigger: TACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGA...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGAGTAACCAGGAGCTATaGTCATTTCTTAGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLSNQEL*SFLRFS
Trigger: AGAAAACCTAAGAAATGATCATAGCTCCTGGTTACT...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCACGAAGTCCTGCATGTaGAGGCTCAGGGAGTGGAAG +
Preference number: 2 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLITKSCM*RLREWK
Trigger: CTTCCACTCCCTGAGCCTGCACATGCAGGACTTCGT...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR TCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCAGAGATGCTTGATACATaGGGGGTCAGAAAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPEMLDT*GVRKKP
Trigger: AGGCTTCTTTCTGACCCCTCATGTATCAAGCATCTC...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTTCACCTGGAGATGCTTaGTACATGAGGGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: MFLFPLVARKLGDMVTTISPGDA*YMRGQK
Trigger: TTTCTGACCCCTCATGTATCAAGCATCTCCAGGTGA...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTGCATCAAATCTTTTTaGTCAATCTTGTCTAGGTCC +
Preference number: 2 (lower is better)
Translates to: PLVARKLGDMVTTIQAHICIKSF*SILSRS
Trigger: GGACCTAGACAAGATTGATCAAAAAGATTTGATGCA...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTTATTCAGTCCTGGGCTaGTGTGGGATGATCCATCTT +
Preference number: 2 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSYSVLG*CGMIHL
Trigger: AAGATGGATCATCCCACAGCAGCCCAGGACTGAATA...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTATGATCCATCTTCAGTaGGGGATGAAAGTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: MFLFPLVARKLGDMVTTIMIHLQ*GMKVPR
Trigger: CCTGGGAACTTTCATCCCCCACTGAAGATGGATCAT...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTTGTTTCTTTTCCCACTaGTTGCCAGGAAGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: MFLFPLVARKLGDMVTTICFFSH*LPGSLE
Trigger: CTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACA...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp TCAAATCTTTTTGATCAATCTTGTCTAGGTCCTGGTACCAGCGGTTGTAAGCCATCACAGAGGTCACTGTaGCATGGATCACATTGGCCT +
Preference number: 2 (lower is better)
Translates to: SNLFDQSCLGPGTSGCKPSQRSL*HGSHWP
Trigger: AGGCCAATGTGATCCATGCCACAGTGACCTCTGTGA...TGGCTTACAACCGCTGGTACCAGGACCTAGACAAGATTGATCAAAAAGATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCAGAAAAGCTTAGGGTCTaGGAAACCGAAGTAGGACGA +
Preference number: 2 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPEKLRV*ETEVGR
Trigger: TCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTC...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAAAACAGGGTCTTTAGCTaGGTCCGAAAGAGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKNRVFS*VRKRGL
Trigger: CAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTT...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR GCA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCCTTCTTCTTTCTTCTaGTGGGATGAACATCTAGGG +
Preference number: 2 (lower is better)
Translates to: MFLFPLVARKLGDMVTTIPSSFF*WDEHLG
Trigger: CCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTCCTCCACCCACATCTaGAGCCTCAGGAAGCTGATG +
Preference number: 2 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVSSTHI*SLRKLM
Trigger: CATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAGGA...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTCAGAAAGAAGCCTGGTaGGCGAGCATGGCTTATTCA +
Preference number: 2 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPQKEAW*ASMAYS
Trigger: TGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTG...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCCAGAAAGAAGCCTGGTaGGCGAGCATGGCTTATTCA +
Preference number: 2 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLIQKEAW*ASMAYS
Trigger: TGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTG...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCCTCCCGTAGTCTTCTaGTTTCTAGCTAAGAAACCA +
Preference number: 2 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSPPVVF*FLAKKP
Trigger: TGGTTTCTTAGCTAGAAACCAGAAGACTACGGGAGG...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp TCAAATCTTTTTGATCAATCTTGTCTAGGTCCTGGTACCAGCGGTTGTAAGCCATCAGCCACAGAGTGCTaGGTCATGTTAACAAAGGTG +
Preference number: 2 (lower is better)
Translates to: SNLFDQSCLGPGTSGCKPSATEC*VMLTKV
Trigger: CACCTTTGTTAACATGACCCAGCACTCTGTGGCTGA...TGGCTTACAACCGCTGGTACCAGGACCTAGACAAGATTGATCAAAAAGATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511945.5
3UTR-3UTR TCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTCACCTGGAGATGCTTaGTACATGAGGGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFSPGDA*YMRGQK
Trigger: TTTCTGACCCCTCATGTATCAAGCATCTCCAGGTGA...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp ACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTTCTACTCAGGCTTGGAGATGGTaGCTAGGGAGTTCTGAACTA +
Preference number: 2 (lower is better)
Translates to: TVTRSYDHFLGFLIFPSTQAWRW*LGSSEL
Trigger: TAGTTCAGAACTCCCTAGTCACCATCTCCAAGCCTG...AGTAGAAGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAATATTCAGTCCTGGGCTaGTGTGGGATGATCCATCTT +
Preference number: 2 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKYSVLG*CGMIHL
Trigger: AAGATGGATCATCCCACAGCAGCCCAGGACTGAATA...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTATGATCCATCTTCAGTaGGGGATGAAAGTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPMIHLQ*GMKVPR
Trigger: CCTGGGAACTTTCATCCCCCACTGAAGATGGATCAT...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAACTGCTCTCTACCATCTaGGGACTTCTCTTCTTTATA +
Preference number: 2 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKLLSTI*GLLFFI
Trigger: TATAAAGAAGAGAAGTCCCCAGATGGTAGAGAGCAG...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTGCATTCCTCAATCTTTaGATAAGGAAGAGAATGGCT +
Preference number: 2 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPAFLNL*IRKRMA
Trigger: AGCCATTCTCTTCCTTATGCAAAGATTGAGGAATGC...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR TCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAAAGTAACCAGGAGCTATaGTCATTTCTTAGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKSNQEL*SFLRFS
Trigger: AGAAAACCTAAGAAATGATCATAGCTCCTGGTTACT...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR GCA 90 bp ACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTTCTACTGCATTCCTCAATCTTTaGATAAGGAAGAGAATGGCT +
Preference number: 2 (lower is better)
Translates to: TVTRSYDHFLGFLIFPSTAFLNL*IRKRMA
Trigger: AGCCATTCTCTTCCTTATGCAAAGATTGAGGAATGC...AGTAGAAGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR GCA 72 bp GGGGACTGGACTCGCCAAACAGCTGCCTCCTGGGGCTaGTTTCGCCGGAAGCTGGCAGAGATGTTGACAGGG +
Preference number: 3 (lower is better)
Translates to: GDWTRQTAASWG*FRRKLAEMLTG
Trigger: CCCTGTCAACATCTCTGCCAGCTTCCGGCGAAAGCAGCCCCAGGAGGCAGCTGTTTGGCGAGTCCAGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR CCA 72 bp GGTACCAGCGGTTGTAAGCCAGCAAGGCCACATTCTTaGCAGCCACGGCCATCACCTCCACGGAGCTGGCCG +
Preference number: 3 (lower is better)
Translates to: GTSGCKPARPHS*QPRPSPPRSWP
Trigger: CGGCCAGCTCCGTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAACCGCTGGTACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR GCA 72 bp TTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTaGTCCCCGCCGAAGATGGCGCTCCTGCCCACCACC +
Preference number: 3 (lower is better)
Translates to: FSRYQSVSSSMK*SPPKMALLPTT
Trigger: GGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
3UTR CCA 72 bp GGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGGCTTaGGGGACTGGACTCGCCAAACAGCTGCCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: GTGSLAGSERGA*GTGLAKQLPPG
Trigger: CCCAGGAGGCAGCTGTTTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR TCA 72 bp AGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATaGAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: RGSAGTSQSPPA*SAPRRRWRSCP
Trigger: TGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
3UTR GCA 72 bp TGGACCAAGGAGACGACGGTGGGCTGGAAAGAGCCCTaGACGTCATCAATGGGCGGGTGGAAGCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: WTKETTVGWKEP*TSSMGGWKPAK
Trigger: CTTTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGGGCTCTTTCCAGCCCACCGTCGTCTCCTTGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR GCA 72 bp GTGACGCCCACCTGCAGCAGGGACTCAGCCACAGAGTaGTGGGTCATGTTAACAAAGGTGGACTCCCCCAGT +
Preference number: 3 (lower is better)
Translates to: VTPTCSRDSATE*WVMLTKVDSPS
Trigger: ACTGGGGGAGTCCACCTTTGTTAACATGACCCAGCACTCTGTGGCTGAGTCCCTGCTGCAGGTGGGCGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511945.5
3UTR CCA 72 bp CGACGGTGGGCTGGAAAGAGCCCTGCACGTCATCAATaGGCGGGTGGAAGCCTGCAAAGGTTAAGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: RRWAGKSPARHQ*AGGSLQRLSCC
Trigger: GCAGCAACTTAACCTTTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGGGCTCTTTCCAGCCCACCGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp AGAGGGGATGGGCCTGCCACTCAGCTGTCTGCACTGAGTAATAGGAACGGAACAGTCCGAAAGAGGGGCTaGGGGGACTGGACTCGCCAA +
Preference number: 3 (lower is better)
Translates to: RGDGPATQLSALSNRNGTVRKRG*GDWTRQ
Trigger: TTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGAC...TGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAGTGGCAGGCCCATCCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp GGTTGTAAGCCAGCAAGGCCACATTCTTGGCAGCCACGGCCATCACCTCCACGGGCACACATCTCTTCCTaGGGTCCTACCACAGTCATC +
Preference number: 3 (lower is better)
Translates to: GCKPARPHSWQPRPSPPRAHISS*GPTTVI
Trigger: GATGACTGTGGTAGGACCCAAGGAAGAGATGTGTGC...CCGTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR TCA 72 bp CCTGGGGCTGCTTTCGCCGGAAGCTGGCAGAGATGTTaGCAGGGCAGATGTTGTCCAGAGTGCAGAAGAAGC +
Preference number: 3 (lower is better)
Translates to: PGAAFAGSWQRC*QGRCCPECRRS
Trigger: GCTTCTTCTGCACTCTGGACAACATCTGCCCTGTCAACATCTCTGCCAGCTTCCGGCGAAAGCAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR GCA 72 bp AAACCAGCTTATTGCCTCCTTCCACAGACCACAGGCTaGCTTGGGCCCCGGCTAGTGACATGGCTCCTGCAA +
Preference number: 3 (lower is better)
Translates to: KPAYCLLPQTTG*LGPRLVTWLLQ
Trigger: TTGCAGGAGCCATGTCACTAGCCGGGGCCCAAGGCAGCCTGTGGTCTGTGGAAGGAGGCAATAAGCTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR GCA 72 bp ACGACATCATCAATAAAGCGCTGCGTGACGCCCACCTaGAGCAGGGACTCAGCCACAGAGTGCTGGGTCATG +
Preference number: 3 (lower is better)
Translates to: TTSSIKRCVTPT*SRDSATECWVM
Trigger: CATGACCCAGCACTCTGTGGCTGAGTCCCTGCTGCAGGTGGGCGTCACGCAGCGCTTTATTGATGATGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511945.5
3UTR CCA 72 bp TCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTaGGGGATGAAAGTTCCCAGGCTCTCCCTAGAGCCC +
Preference number: 3 (lower is better)
Translates to: SVLGCCGMIHLQ*GMKVPRLSLEP
Trigger: GGGCTCTAGGGAGAGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR GCA 72 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTaGTGTGGGATGATCCATCTTCAGTGGGGGATGAAA +
Preference number: 3 (lower is better)
Translates to: AWWASMAYSVLG*CGMIHLQWGMK
Trigger: TTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR CCA 72 bp TCAGAGCTGTTGCCTACCTCATTCTCATACGCCACCTaGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTC +
Preference number: 3 (lower is better)
Translates to: SELLPTSFSYAT*YRAFPSVLCRV
Trigger: GACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAATGAGGTAGGCAACAGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGGCACACATCTCTTCCTaGGGTCCTACCACAGTCATC +
Preference number: 3 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRAHISS*GPTTVI
Trigger: GATGACTGTGGTAGGACCCAAGGAAGAGATGTGTGC...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCCTCAGCCCCAGCAGCTaGACGAAGTCCTGCATGTGC +
Preference number: 3 (lower is better)
Translates to: PLVARKLGDMVTTIQAHILSPSS*TKSCMC
Trigger: GCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGAG...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp TGGAAAGAGCCCTGCACGTCATCAATGGGCGGGTGGAAGCCTGCAAAGGTTAAGGTGGCATGGATCACATaGGCCTTGGTGAGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: WKEPCTSSMGGWKPAKVKVAWIT*ALVSFS
Trigger: GCTGAAGCTCACCAAGGCCAATGTGATCCATGCCAC...CTTAACCTTTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGGGCTCTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR TCA 72 bp AGGCAGACAGTAGGTCACCTGGAGATGCTTGATACATaGGGGGTCAGAAAGAAGCCTGGTGGGCGAGCATGG +
Preference number: 3 (lower is better)
Translates to: RQTVGHLEMLDT*GVRKKPGGRAW
Trigger: CCATGCTCGCCCACCAGGCTTCTTTCTGACCCCTCATGTATCAAGCATCTCCAGGTGACCTACTGTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR TCA 72 bp GTGCTGGGTCATGTTAACAAAGGTGGACTCCCCCAGTaGGTAGAGCAGCTCCTCCACACCCGAGAAGGCATA +
Preference number: 3 (lower is better)
Translates to: VLGHVNKGGLPQ*VEQLLHTREGI
Trigger: TATGCCTTCTCGGGTGTGGAGGAGCTGCTCTACTCACTGGGGGAGTCCACCTTTGTTAACATGACCCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511945.5
3UTR CCA 72 bp TCTGTGCTGTGCAGGGTCACAGAGGTCACTGTGGCATaGATCACATTGGCCTTGGTGAGCTTCAGCAAACCG +
Preference number: 3 (lower is better)
Translates to: SVLCRVTEVTVA*ITLALVSFSKP
Trigger: CGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACCTCTGTGACCCTGCACAGCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp GTTGTAAGCCAGCAAGGCCACATTCTTGGCAGCCACGGCCATCACCTCCACGGATTCTTTTCCCACTGGTaGCCAGGAAGCTTGGAGATA +
Preference number: 3 (lower is better)
Translates to: VVSQQGHILGSHGHHLHGFFSHW*PGSLEI
Trigger: TATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAA...TCCGTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp GAAAAGCTTAGGGTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACGTGATGTTGACAGGCTaGGAGATGGTGACTAGGGAG +
Preference number: 3 (lower is better)
Translates to: EKLRVWETEVGRVEVAVDVMLTG*EMVTRE
Trigger: CTCCCTAGTCACCATCTCCAAGCCTGTCAACATCAC...GTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCGTGATGTTGACAGGCTaGGAGATGGTGACTAGGGAG +
Preference number: 3 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSVMLTG*EMVTRE
Trigger: CTCCCTAGTCACCATCTCCAAGCCTGTCAACATCAC...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp TGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCAGCACACATCTCTTCCTaGGGTCCTACCACAGTCATC +
Preference number: 3 (lower is better)
Translates to: WLIPLGAKEELPSSYSLAAHISS*GPTTVI
Trigger: GATGACTGTGGTAGGACCCAAGGAAGAGATGTGTGC...TGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGTTCTTTTCCCACTGGTaGCCAGGAAGCTTGGAGATA +
Preference number: 3 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRFFSHW*PGSLEI
Trigger: TATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAA...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATTCTGTGGTAAGGATGTaGGCAAAGGGGAAAAGCTTA +
Preference number: 3 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHSVVRM*AKGKSL
Trigger: TAAGCTTTTCCCCTTTGCCAACATCCTTACCACAGA...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR CCA 72 bp GGTAAGGATGTTGGCAAAGGGGAAAAGCTTAGGGTCTaGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTG +
Preference number: 3 (lower is better)
Translates to: GKDVGKGEKLRV*ETEVGRVEVAV
Trigger: CACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTCCCCTTTGCCAACATCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGTCACCTGGAGATGCTaGATACATGAGGGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLVTWRC*IHEGSE
Trigger: TTCTGACCCCTCATGTATCAAGCATCTCCAGGTGAC...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp GCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCAATATGCAGTGATGTaGACAGGCTTGGAGATGGTG +
Preference number: 3 (lower is better)
Translates to: ASLFLQPRMFLFPLVARKQYAVM*TGLEMV
Trigger: CACCATCTCCAAGCCTGTCAACATCACTGCATATTG...CTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGTTCTTTTCCCACTGGTaGCCAGGAAGCTTGGAGATA +
Preference number: 3 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLFFSHW*PGSLEI
Trigger: TATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAA...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCACTCAGCCCCAGCAGCTaGACGAAGTCCTGCATGTGC +
Preference number: 3 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPLSPSS*TKSCMC
Trigger: GCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGAG...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR TCA 72 bp CAGAGGTCACTGTGGCATGGATCACATTGGCCTTGGTaGGCTTCAGCAAACCGGAACAAACCAGCTTATTGC +
Preference number: 3 (lower is better)
Translates to: QRSLWHGSHWPW*ASANRNKPAYC
Trigger: GCAATAAGCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp TTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACCAATATGCAGTGATGTaGACAGGCTTGGAGATGGTG +
Preference number: 3 (lower is better)
Translates to: FPLVARKLGDMVTTIQAHQYAVM*TGLEMV
Trigger: CACCATCTCCAAGCCTGTCAACATCACTGCATATTG...GTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCCAATATGCAGTGATGTaGACAGGCTTGGAGATGGTG +
Preference number: 3 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIQYAVM*TGLEMV
Trigger: CACCATCTCCAAGCCTGTCAACATCACTGCATATTG...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTTCTTTTCCCACTGGTaGCCAGGAAGCTTGGAGATA +
Preference number: 3 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIFFSHW*PGSLEI
Trigger: TATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAA...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR TCA 72 bp TTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTaGCGACTATTCAGGCACACATCTCTTCCTTGGGTC +
Preference number: 3 (lower is better)
Translates to: FSHWLPGSLEIW*RLFRHTSLPWV
Trigger: GACCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR GCA 72 bp CTTTGCATAAGGAAGAGAATGGCTAATTCCTCTAGGTaGCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGC +
Preference number: 3 (lower is better)
Translates to: LCIRKRMANSSR*QGRASLFLQPR
Trigger: GCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCTTATGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp CATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGGTCACCTGGAGATGCTaGATACATGAGGGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: HLFLGSYHSHLLQYAVMLVTWRC*IHEGSE
Trigger: TTCTGACCCCTCATGTATCAAGCATCTCCAGGTGAC...CAACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR CCA 72 bp TCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTaGAGATATGGTGACGACTATTCAGGCACACATCTC +
Preference number: 3 (lower is better)
Translates to: SHVSFPTGCQEA*RYGDDYSGTHL
Trigger: GAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp TGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCAATGTTTTCTTGTAGGTaGCCTCAATTGATTGTCCAT +
Preference number: 3 (lower is better)
Translates to: WLIPLGAKEELPSSYSLAMFSCR*PQLIVH
Trigger: ATGGACAATCAATTGAGGCAACCTACAAGAAAACAT...TGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp TCAAATCTTTTTGATCAATCTTGTCTAGGTCCTGGTACCAGCGGTTGTAAGCCATTGACAGGGCAGATGTaGTCCAGAGTGCAGAAGAAG +
Preference number: 3 (lower is better)
Translates to: SNLFDQSCLGPGTSGCKPLTGQM*SRVQKK
Trigger: CTTCTTCTGCACTCTGGACAACATCTGCCCTGTCAA...TGGCTTACAACCGCTGGTACCAGGACCTAGACAAGATTGATCAAAAAGATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR TCA 72 bp TCCCAGGCTCTCCCTAGAGCCCTCACAGTTCAGTCTTaGCCTTGTGCATCAAATCTTTTTGATCAATCTTGT +
Preference number: 3 (lower is better)
Translates to: SQALPRALTVQS*PCASNLFDQSC
Trigger: ACAAGATTGATCAAAAAGATTTGATGCACAAGGTCAAGACTGAACTGTGAGGGCTCTAGGGAGAGCCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR GCA 72 bp CTGAAGAATCCTACCCCAACACCTTCTTCTTTCTTCTaGTGGGATGAACATCTAGGGGTAAGATATGACTGC +
Preference number: 3 (lower is better)
Translates to: LKNPTPTPSSFF*WDEHLGVRYDC
Trigger: GCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGGTGTTGGGGTAGGATTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTTGTAGGTTGCCTCAATaGATTGTCCATTGTGGGAGT +
Preference number: 3 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSCRLPQ*IVHCGS
Trigger: ACTCCCACAATGGACAATCAATTGAGGCAACCTACA...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp ACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTTCTACTGTGATGTTGACAGGCTaGGAGATGGTGACTAGGGAG +
Preference number: 3 (lower is better)
Translates to: TVTRSYDHFLGFLIFPSTVMLTG*EMVTRE
Trigger: CTCCCTAGTCACCATCTCCAAGCCTGTCAACATCAC...AGTAGAAGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR TCA 72 bp CACAGTTCAGTCTTGACCTTGTGCATCAAATCTTTTTaGTCAATCTTGTCTAGGTCCTGGTACCAGCGGTTG +
Preference number: 3 (lower is better)
Translates to: HSSVLTLCIKSF*SILSRSWYQRL
Trigger: CAACCGCTGGTACCAGGACCTAGACAAGATTGATCAAAAAGATTTGATGCACAAGGTCAAGACTGAACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR-3UTR CAA 90 bp ACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGATGTTTTCTTGTAGGTaGCCTCAATTGATTGTCCAT +
Preference number: 3 (lower is better)
Translates to: THLFLGSYHSHLLQYAVMMFSCR*PQLIVH
Trigger: ATGGACAATCAATTGAGGCAACCTACAAGAAAACAT...CATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATATGTTTTCTTGTAGGTaGCCTCAATTGATTGTCCAT +
Preference number: 3 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDMFSCR*PQLIVH
Trigger: ATGGACAATCAATTGAGGCAACCTACAAGAAAACAT...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR CCA 72 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTaGTTTCTAGCTAAGAAACCAAGTCTGAAGCACCTT +
Preference number: 3 (lower is better)
Translates to: IVLCLIFPPVVF*FLAKKPSLKHL
Trigger: AAGGTGCTTCAGACTTGGTTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCGTCACCTGGAGATGCTaGATACATGAGGGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVVTWRC*IHEGSE
Trigger: TTCTGACCCCTCATGTATCAAGCATCTCCAGGTGAC...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR-3UTR CAA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAATGTAGGTTGCCTCAATaGATTGTCCATTGTGGGAGT +
Preference number: 3 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKCRLPQ*IVHCGS
Trigger: ACTCCCACAATGGACAATCAATTGAGGCAACCTACA...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR TCA 72 bp CTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATaGTCATTTCTTAGGTTTTCTGATCTTCCCTTCTAC +
Preference number: 3 (lower is better)
Translates to: LQIHQVHSNQEL*SFLRFSDLPFY
Trigger: GTAGAAGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTCAGCAAACCTCGGGAGCGTaGGGCGGGAGCCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: VLPAEDGAPAHHLAPVPQQTSGA*GGSHRG
Trigger: CCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTG...CTGAGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp CTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTCAGCCTACCACCTCGCGCCGGTaGCTCAGCCTGTGTAACCTC +
Preference number: 4 (lower is better)
Translates to: LPAEDGAPAHHLAPVPQPTTSRR*LSLCNL
Trigger: GAGGTTACACAGGCTGAGGCACCGGCGCGAGGTGGT...AGGCTGAGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS-3UTR TCA 90 bp TCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTCAGCCTGGTGCTGCTTGTTGACTaGGATGGTGGCCAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SPPKMALLPTTSRRCLSLVLLVD*DGGQAA
Trigger: GGCCGCTTGGCCACCATCTCAGTCAACAAGCAGCAC...CAGGCTGAGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS-3UTR CCA 90 bp AAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTCGACCACAGGCTGCCTTaGGCCCCGGCTAGTGACATG +
Preference number: 4 (lower is better)
Translates to: KCSPPKMALLPTTSRRCLDHRLP*APASDM
Trigger: CATGTCACTAGCCGGGGCCCAAGGCAGCCTGTGGTC...GAGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTCAGCCTGGTGGGCGAGCATaGCTTATTCAGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLPAEDGAPAHHLAPVPQPGGRA*LIQSWA
Trigger: AGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGG...CTGAGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp CGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTCAGCCTGTGTACAGTCTCCTCCAGCATaGAGTGCTCCCCGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: RRRWRSCPPPRAGASACVQSPPA*SAPRRR
Trigger: TCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTG...TACACAGGCTGAGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS-3UTR TCA 90 bp CAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGCAGTCTCCTCCAGCATaGAGTGCTCCCCGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: QHEVLPAEDGAPAHHLAPQSPPA*SAPRRR
Trigger: TCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTG...CGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp CATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGTCCTCCAGCATGAAGTaGTCCCCGCCGAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: HEVLPAEDGAPAHHLAPVSSSMK*SPPKMA
Trigger: CGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGA...CACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp GAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTTCGTACACGTCGATCTaGACCCGAGGTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: EVLPAEDGAPAHHLAPVPSYTSI*TRGPKC
Trigger: GCACTTTGGACCTCGGGTGCAGATCGACGTGTACGA...AGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp GAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTTCCTCCACCCACATCTaGAGCCTCAGGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: EVLPAEDGAPAHHLAPVPSSTHI*SLRKLM
Trigger: CATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAGGA...AGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp CGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTCAGCCTGTGTAAGCTTGACGAAGTCCTaGATGTGCAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RRRWRSCPPPRAGASACVSLTKS*MCRLRE
Trigger: CTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCT...TACACAGGCTGAGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS-3UTR CCA 90 bp GAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTGGTCCAAAGTGCTGCTaGAGAAAATGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EVLPAEDGAPAHHLAPVPGPKCC*RKWATA
Trigger: TGCTGTGGCCCATTTTCTCCAGCAGCACTTTGGACC...AGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR TCA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGGGCGGGCATCGCTGCTaGCTGGCCATAGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRGGHRC*LAIAGP
Trigger: CGGGCCAGCTATGGCCAGTCAGCAGCGATGCCCGCC...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GCTGGTCATGGAGTGCAAACCTCGGGAGCGTGGGGCGGGAGCCATAGAGGGGATGGCGGGCATCGCTGCTaGCTGGCCATAGCTCATGAA +
Preference number: 4 (lower is better)
Translates to: AGHGVQTSGAWGGSHRGDGGHRC*LAIAHE
Trigger: TTCATGAGCTATGGCCAGTCAGCAGCGATGCCCGCC...ATCCCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTGCACTCCATGACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505669.5
CDS-3UTR GCA 90 bp CATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCGAGGTCCAAAGTGCTaGTGGAGAAAATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: HEVLPAEDGAPAHHLAPVRGPKC*WRKWAT
Trigger: TGTGGCCCATTTTCTCCAGCAGCACTTTGGACCTCG...CACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCACCACCTCGCGCCGGTaGCTCAGCCCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMITTSRR*LSPSSL
Trigger: CAAGCTGCTGGGGCTGAGGCACCGGCGCGAGGTGGT...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp AGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGCGAAGATGGCGCTCCTaGCCACCACCTCGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: RFSRYQSVSSSMKCSPPKRRWRS*PPPRAG
Trigger: ACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCG...CTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp AAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGCGAAGATGGCGCTCCTaGCCACCACCTCGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: KRFSRYQSVSSSMKCSPPRRWRS*PPPRAG
Trigger: ACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCG...CGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp CAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCGACTCGCCAAACAGCTaGCTCCTGGGGCTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: QSVSSSMKCSPPKMALLPDSPNS*LLGLLS
Trigger: CGAAAGCAGCCCCAGGAGGCAGCTGTTTGGCGAGTC...GGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGCCTGGGGTAAGATATGACTaGTCTCTACCATCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: EVLPAEDGAPAHHLAPVPGVRYD*SLPSGD
Trigger: GTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCC...AGGCACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCACCACCTCGCGCCGGTGGAGGTCACTGTGGCATaGATCACATTGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HEVLPAEDGAPAHHLAPVEVTVA*ITLALV
Trigger: CACCAAGGCCAATGTGATCCATGCCACAGTGACCTC...CACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCGAGACGACGGTGGGCTaGAAAGAGCCCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: QSVSSSMKCSPPKMALLPETTVG*KEPCTS
Trigger: TGACGTGCAGGGCTCTTTCCAGCCCACCGTCGTCTC...GGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CGGTGCCTCAGCCCCAGCAGCTTGACGAAGTCCTGCATGTGCAGGCTCAGGGAGCAAACAGCTGCCTCCTaGGGCTGCTTTCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RCLSPSSLTKSCMCRLREQTAAS*GCFRRK
Trigger: CTTCCGGCGAAAGCAGCCCCAGGAGGCAGCTGTTTG...CTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGAGGCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CTCCACCCACATCTGCAGCCTCAGGAAGCTGATGCCATAGTGCCACCAGAGGCGTCACCTCCACGGAGCTaGCCGCCCACTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LHPHLQPQEADAIVPPEASPPRS*PPTPGH
Trigger: ATGCCCTGGAGTGGGCGGCCAGCTCCGTGGAGGTGA...CGCCTCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCGCTGCCTCCTGGGGCTaGTTTCGCCGGAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMIAASWG*FRRKLA
Trigger: TGCCAGCTTCCGGCGAAAGCAGCCCCAGGAGGCAGC...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CTCCACCCACATCTGCAGCCTCAGGAAGCTGATGCCATAGTGCCACCAGAGGCGAGGGGCTTGGGGGACTaGACTCGCCAAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LHPHLQPQEADAIVPPEARGLGD*TRQTAA
Trigger: GGCAGCTGTTTGGCGAGTCCAGTCCCCCAAGCCCCT...CGCCTCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATCAAACCTCGGGAGCGTaGGGCGGGAGCCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHQTSGA*GGSHRG
Trigger: CCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTG...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGACAAACCTCGGGAGCGTaGGGCGGGAGCCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: LIRHLVQGFPLCAVQGHRQTSGA*GGSHRG
Trigger: CCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTG...TCTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp AGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGTCACCTCCACGGAGCTaGCCGCCCACTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: RFSRYQSVSSSMKCSPPKSPPRS*PPTPGH
Trigger: ATGCCCTGGAGTGGGCGGCCAGCTCCGTGGAGGTGA...CTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR CAA 72 bp CGGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGGCTaGGGGGACTGGACTCGCCAAACAGCTGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RNRVFSWVRKRG*GDWTRQTAASW
Trigger: CCAGGAGGCAGCTGTTTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GCGGTTGTAAGCCAGCAAGGCCACATTCTTGGCAGCCACGGCCATCACCTCCACCAGTCTCCTCCAGCATaGAGTGCTCCCCGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: AVVSQQGHILGSHGHHLHQSPPA*SAPRRR
Trigger: TCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTG...GTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp ATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCCACAGACCACAGGCTaGCTTGGGCCCCGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: IVPPEAEEVQQVPVSLLQPQTTG*LGPRLV
Trigger: CACTAGCCGGGGCCCAAGGCAGCCTGTGGTCTGTGG...CTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCCACAGACCACAGGCTaGCTTGGGCCCCGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRPQTTG*LGPRLV
Trigger: CACTAGCCGGGGCCCAAGGCAGCCTGTGGTCTGTGG...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGGCTGCCTCCTGGGGCTaGTTTCGCCGGAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRAASWG*FRRKLA
Trigger: TGCCAGCTTCCGGCGAAAGCAGCCCCAGGAGGCAGC...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCGACCACAGGCTGCCTTaGGCCCCGGCTAGTGACATG +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMIDHRLP*APASDM
Trigger: CATGTCACTAGCCGGGGCCCAAGGCAGCCTGTGGTC...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGTGCTGCTTGTTGACTaGGATGGTGGCCAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHVLLVD*DGGQAA
Trigger: GGCCGCTTGGCCACCATCTCAGTCAACAAGCAGCAC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGAGACGACGGTGGACTCCCCCAGTaGGTAGAGCAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VWETEVGRVEVAVDQGDDGGLPQ*VEQLLH
Trigger: GTGGAGGAGCTGCTCTACTCACTGGGGGAGTCCACC...GTCGTCTCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511945.5
CDS-3UTR GCA 90 bp CAAAGGCGGGCATCGCTGCTGACTGGCCATAGCTGGCCCGCAGGACAGCAGAAAACCCGAGGTCCAAAGTaGTGCTGGAGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: QRRASLLTGHSWPAGQQKTRGPK*CWRKWA
Trigger: GGCCCATTTTCTCCAGCAGCACTTTGGACCTCGGGT...TTTCTGCTGTCCTGCGGGCCAGCTATGGCCAGTCAGCAGCGATGCCCGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511945.5
CDS-3UTR GCA 90 bp TCTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGTCCTCCAGCATGAAGTaGTCCCCGCCGAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: SHTPPGTGLSPLCCAGSQSSSMK*SPPKMA
Trigger: CGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGA...CTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGGGCTTTCCCCTCTGTaGTGTGCAGGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHGLSPL*CAGSQR
Trigger: CCTCTGTGACCCTGCACAGCACAGAGGGGAAAGCCC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGGGCTTTCCCCTCTGTaGTGTGCAGGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: EEVQQVPVSLLQHEVLPAGLSPL*CAGSQR
Trigger: CCTCTGTGACCCTGCACAGCACAGAGGGGAAAGCCC...GGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGGACTCGCCAAACAGCTaGCTCCTGGGGCTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLDSPNS*LLGLLS
Trigger: CGAAAGCAGCCCCAGGAGGCAGCTGTTTGGCGAGTC...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGAGCTGGTCATGGAGTaGAAACCTCGGGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHELVME*KPRERG
Trigger: CCCACGCTCCCGAGGTTTGCACTCCATGACCAGCTC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGAGAGCTGGTCATGGAGTaGAAACCTCGGGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LIRHLVQGFPLCAVQGHRELVME*KPRERG
Trigger: CCCACGCTCCCGAGGTTTGCACTCCATGACCAGCTC...TCTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCTGACCACAGGCTGCCTTaGGCCCCGGCTAGTGACATG +
Preference number: 4 (lower is better)
Translates to: PGLLWDDPSSVGDESSQADHRLP*APASDM
Trigger: CATGTCACTAGCCGGGGCCCAAGGCAGCCTGTGGTC...AGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GGTCATGGAGTGCAAACCTCGGGAGCGTGGGGCGGGAGCCATAGAGGGGATGGGTCATCAATGGGCGGGTaGAAGCCTGCAAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: GHGVQTSGAWGGSHRGDGSSMGG*KPAKVK
Trigger: CTTAACCTTTGCAGGCTTCCACCCGCCCATTGATGA...CCCATCCCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTGCACTCCATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp TACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCTGCACGTCATCAATaGGCGGGTGGAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: YQSVSSSMKCSPPKMALLPARHQ*AGGSLQ
Trigger: TTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGG...CAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGCAGCCTCAGGAAGCTaGTGCCATAGTGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHAASGS*CHSATR
Trigger: TCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp AGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGGCAGCCTCAGGAAGCTaGTGCCATAGTGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: RFSRYQSVSSSMKCSPPKAASGS*CHSATR
Trigger: TCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGC...CTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR TCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGGGCGGGCATCGCTGCTaGCTGGCCATAGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGGGHRC*LAIAGP
Trigger: CGGGCCAGCTATGGCCAGTCAGCAGCGATGCCCGCC...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp TACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCTCCATCCAGCAGCTTaGCGAAGTCCTGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: YQSVSSSMKCSPPKMALLLHPAA*RSPACA
Trigger: TGCACATGCAGGACTTCGTCAAGCTGCTGGATGGAG...CAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS-3UTR GCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCACCACCTCGCGCCGGTaGCTCAGCCCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLVARKLGDMVTTIQAHITTSRR*LSPSSL
Trigger: CAAGCTGCTGGGGCTGAGGCACCGGCGCGAGGTGGT...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTTCCTCCAGCATGAAGTaGTCCCCGCCGAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: GQKEAWWASMAYSVLGCCSSSMK*SPPKMA
Trigger: CGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGA...ACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATTCCTCCAGCATGAAGTaGTCCCCGCCGAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: VQQVPVSLLQHEVLPAEDSSSMK*SPPKMA
Trigger: CGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGA...ATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp GTGGCATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACAAACCAGCGCTGCCTCCTGGGGCTaGTTTCGCCGGAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VAWITLALVSFSKPEQTSAASWG*FRRKLA
Trigger: TGCCAGCTTCCGGCGAAAGCAGCCCCAGGAGGCAGC...GCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GAAAAGCTTAGGGTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACGCTGCCTCCTGGGGCTaGTTTCGCCGGAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EKLRVWETEVGRVEVAVDAASWG*FRRKLA
Trigger: TGCCAGCTTCCGGCGAAAGCAGCCCCAGGAGGCAGC...GTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GATGCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCGACTCGCCAAACAGCTaGCTCCTGGGGCTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: DAIVPPEAEEVQQVPVSLDSPNS*LLGLLS
Trigger: CGAAAGCAGCCCCAGGAGGCAGCTGTTTGGCGAGTC...GAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GCTGGTCATGGAGTGCAAACCTCGGGAGCGTGGGGCGGGAGCCATAGAGGGGATTCACAGAGGTCACTGTaGCATGGATCACATTGGCCT +
Preference number: 4 (lower is better)
Translates to: AGHGVQTSGAWGGSHRGDSQRSL*HGSHWP
Trigger: AGGCCAATGTGATCCATGCCACAGTGACCTCTGTGA...ATCCCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTGCACTCCATGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp AGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGCCTGCACGTCATCAATaGGCGGGTGGAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: RFSRYQSVSSSMKCSPPKPARHQ*AGGSLQ
Trigger: TTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGG...CTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGCCTGCACGTCATCAATaGGCGGGTGGAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLPARHQ*AGGSLQ
Trigger: TTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGG...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGAGACGACGGTGGGCTaGAAAGAGCCCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: VQQVPVSLLQHEVLPAEDETTVG*KEPCTS
Trigger: TGACGTGCAGGGCTCTTTCCAGCCCACCGTCGTCTC...ATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCCAAACCTCGGGAGCGTaGGGCGGGAGCCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSQTSGA*GGSHRG
Trigger: CCCTCTATGGCTCCCGCCCCACGCTCCCGAGGTTTG...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGTCACCTCCACGGAGCTaGCCGCCCACTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLSPPRS*PPTPGH
Trigger: ATGCCCTGGAGTGGGCGGCCAGCTCCGTGGAGGTGA...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGACCTGGTGGGCGAGCATaGCTTATTCAGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LIRHLVQGFPLCAVQGHRPGGRA*LIQSWA
Trigger: AGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGG...TCTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGTCAGCCCCAGCAGCTTaGCGAAGTCCTGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRSAPAA*RSPACA
Trigger: TGCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGA...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GCTGATGCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTGCAGCCTCAGGAAGCTaGTGCCATAGTGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: ADAIVPPEAEEVQQVPVSAASGS*CHSATR
Trigger: TCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGC...ACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGCATCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR TCA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCGAAGTAGGACGAGTTaGGGTAGCCGTGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRRSRTS*GSRGPR
Trigger: CCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCG...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGAGACGACCGAAGTAGGACGAGTTaGGGTAGCCGTGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: VWETEVGRVEVAVDQGDDRSRTS*GSRGPR
Trigger: CCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCG...GTCGTCTCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTTGGGCTGCTGTGGGATaGTCCATCTTCAGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GQKEAWWASMAYSVLGCCWAAVG*SIFSGG
Trigger: TCCCCCACTGAAGATGGATCATCCCACAGCAGCCCA...ACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp AGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGTCGTACACGTCGATCTaGACCCGAGGTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: RFSRYQSVSSSMKCSPPKSYTSI*TRGPKC
Trigger: GCACTTTGGACCTCGGGTGCAGATCGACGTGTACGA...CTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTCGTACACGTCGATCTaGACCCGAGGTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLSYTSI*TRGPKC
Trigger: GCACTTTGGACCTCGGGTGCAGATCGACGTGTACGA...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCACGAAGTCCTGCATGTaGAGGCTCAGGGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: AIVPPEAEEVQQVPVSLLTKSCM*RLREWK
Trigger: CTTCCACTCCCTGAGCCTGCACATGCAGGACTTCGT...GAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp AGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGAGCTTGACGAAGTCCTaGATGTGCAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: RFSRYQSVSSSMKCSPPKSLTKS*MCRLRE
Trigger: CTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCT...CTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR CCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTGCTCCCCGCCGAAGATaGCGCTCCTGCCCACCACCT +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVAPRRR*RSCPPP
Trigger: AGGTGGTGGGCAGGAGCGCCATCTTCGGCGGGGAGC...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCACTGACTGGCCATAGCTaGCCCGCAGGACAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: HSATRGGRGSAGTSQSPPLTGHS*PAGQQK
Trigger: TTTCTGCTGTCCTGCGGGCCAGCTATGGCCAGTCAG...TGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511945.5
CDS-3UTR CCA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCCCCCGGCTAGTGACATaGCTCCTGCAAAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSPRLVT*LLQRRA
Trigger: TGCCCGCCTTTGCAGGAGCCATGTCACTAGCCGGGG...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GTGGCATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACAAACCAGCCCCCGGCTAGTGACATaGCTCCTGCAAAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VAWITLALVSFSKPEQTSPRLVT*LLQRRA
Trigger: TGCCCGCCTTTGCAGGAGCCATGTCACTAGCCGGGG...GCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGAGGGGCTTGGGGGACTaGACTCGCCAAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASLFLQPRMFLFPLVARKRGLGD*TRQTAA
Trigger: GGCAGCTGTTTGGCGAGTCCAGTCCCCCAAGCCCCT...CTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCAGGGGCTTGGGGGACTaGACTCGCCAAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSRGLGD*TRQTAA
Trigger: GGCAGCTGTTTGGCGAGTCCAGTCCCCCAAGCCCCT...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp TACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGAGTCCTGGGCTGCTGTaGGATGATCCATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: YQSVSSSMKCSPPKMALLSPGLL*DDPSSV
Trigger: CACTGAAGATGGATCATCCCACAGCAGCCCAGGACT...CAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GTTGAGGTAGCCGTGGACCAAGGAGACGACGGTGGGCTGGAAAGAGCCCTGCACCAGAAAGAAGCCTGGTaGGCGAGCATGGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: VEVAVDQGDDGGLERALHQKEAW*ASMAYS
Trigger: TGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTG...GTGCAGGGCTCTTTCCAGCCCACCGTCGTCTCCTTGGTCCACGGCTACCTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GGGGATGGGCCTGCCACTCAGCTGTCTGCACTGAGTAATAGGAACGGAACAGGGGCAGCAGCCGCCGTGTaGACCCTTAATATAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GDGPATQLSALSNRNGTGAAAAV*TLNIGR
Trigger: TCTGCCTATATTAAGGGTCCACACGGCGGCTGCTGC...CCCTGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAGTGGCAGGCCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGCAGCAGCCGCCGTGTaGACCCTTAATATAGGCAGA +
Preference number: 4 (lower is better)
Translates to: EEVQQVPVSLLQHEVLPAAAAAV*TLNIGR
Trigger: TCTGCCTATATTAAGGGTCCACACGGCGGCTGCTGC...GGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCGTGCTGCTTGTTGACTaGGATGGTGGCCAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSVLLVD*DGGQAA
Trigger: GGCCGCTTGGCCACCATCTCAGTCAACAAGCAGCAC...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACCAGTCTCCTCCAGCATaGAGTGCTCCCCGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GAKEELPSSYSLACFFSHQSPPA*SAPRRR
Trigger: TCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTG...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CTTAGGGTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGAGCAGCCTCAGGAAGCTaGTGCCATAGTGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LRVWETEVGRVEVAVDQGAASGS*CHSATR
Trigger: TCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGC...TCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAATCACATTGGCCTTGGTaGGCTTCAGCAAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: EVQQVPVSLLQHEVLPAESHWPW*ASANRN
Trigger: GTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGA...TTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp CCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCTATCTTCAGTGGGGGATaGAAGTTCCCAGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PGLLWDDPSSVGDESSQAIFSGG*KFPGSP
Trigger: GGGAGAGCCTGGGAACTTTCATCCCCCACTGAAGAT...AGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCTACCCGAGGTCCAAAGTaGTGCTGGAGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: PGLLWDDPSSVGDESSQATRGPK*CWRKWA
Trigger: GGCCCATTTTCTCCAGCAGCACTTTGGACCTCGGGT...AGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp AGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCACCCGAGGTCCAAAGTaGTGCTGGAGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: RRKRFSRYQSVSSSMKCSTRGPK*CWRKWA
Trigger: GGCCCATTTTCTCCAGCAGCACTTTGGACCTCGGGT...GGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp GAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCTCGTACACGTCGATCTaGACCCGAGGTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: EAEEVQQVPVSLLQHEVLSYTSI*TRGPKC
Trigger: GCACTTTGGACCTCGGGTGCAGATCGACGTGTACGA...GAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR GCA 90 bp CCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCTAGCTTGACGAAGTCCTaGATGTGCAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGLLWDDPSSVGDESSQASLTKS*MCRLRE
Trigger: CTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCT...AGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCTTCCTCCACCCACATCTaGAGCCTCAGGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: PGLLWDDPSSVGDESSQASSTHI*SLRKLM
Trigger: CATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAGGA...AGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTTCATCAATAAAGCGCTaGGTGACGCCCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQKEAWWASMAYSVLGCCSSIKR*VTPTCS
Trigger: GCTGCAGGTGGGCGTCACGCAGCGCTTTATTGATGA...ACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCAGGGCTTTCCCCTCTGTaGTGTGCAGGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: WLIPLGAKEELPSSYSLAGLSPL*CAGSQR
Trigger: CCTCTGTGACCCTGCACAGCACAGAGGGGAAAGCCC...TGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TCTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGAGGTTAAGTTGCTGCTaGTGTTGTCCAGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHTPPGTGLSPLCCAGSQRLSCC*CCPGAG
Trigger: CCCTGCACCTGGACAACAGCAGCAGCAACTTAACCT...CTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GTGGCATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACAAACCAGCGGCTGGAAAGAGCCCTaGACGTCATCAATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VAWITLALVSFSKPEQTSGWKEP*TSSMGG
Trigger: CCCGCCCATTGATGACGTGCAGGGCTCTTTCCAGCC...GCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACGAGCTGGTCATGGAGTaGAAACCTCGGGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GAKEELPSSYSLACFFSHELVME*KPRERG
Trigger: CCCACGCTCCCGAGGTTTGCACTCCATGACCAGCTC...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCGAGCTGGTCATGGAGTaGAAACCTCGGGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSELVME*KPRERG
Trigger: CCCACGCTCCCGAGGTTTGCACTCCATGACCAGCTC...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCGGTCCAAAGTGCTGCTaGAGAAAATGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMIGPKCC*RKWATA
Trigger: TGCTGTGGCCCATTTTCTCCAGCAGCACTTTGGACC...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGGGTCCAAAGTGCTGCTaGAGAAAATGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLGPKCC*RKWATA
Trigger: TGCTGTGGCCCATTTTCTCCAGCAGCACTTTGGACC...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGAGGTCACTGTGGCATaGATCACATTGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHEVTVA*ITLALV
Trigger: CACCAAGGCCAATGTGATCCATGCCACAGTGACCTC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAGGTCACTGTGGCATaGATCACATTGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EEVQQVPVSLLQHEVLPAEVTVA*ITLALV
Trigger: CACCAAGGCCAATGTGATCCATGCCACAGTGACCTC...GGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCTTCTCATACGCCACCTaGTACAGGGCTTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: EEVQQVPVSLLQHEVLPAFSYAT*YRAFPS
Trigger: AGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAA...GGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGACGACGGTGGGCTaGAAAGAGCCCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLETTVG*KEPCTS
Trigger: TGACGTGCAGGGCTCTTTCCAGCCCACCGTCGTCTC...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGCCTGGTGGGCGAGCATaGCTTATTCAGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GEHGLFSPGLLWDDPSSVPGGRA*LIQSWA
Trigger: AGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGG...CACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR CAA 72 bp TCCTGGGGCTGCTTTCGCCGGAAGCTGGCAGAGATGTaGACAGGGCAGATGTTGTCCAGAGTGCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SWGCFRRKLAEM*TGQMLSRVQKK
Trigger: CTTCTTCTGCACTCTGGACAACATCTGCCCTGTCAACATCTCTGCCAGCTTCCGGCGAAAGCAGCCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp ATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATAGTGCTGCTTGTTaGCTGAGATGGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: IVPPEAEEVQQVPVSLLQHSAAC*LRWWPS
Trigger: GCTTGGCCACCATCTCAGTCAACAAGCAGCACTATG...CTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR TCA 90 bp GCTGATGCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTTCACATTGGCCTTGGTaGGCTTCAGCAAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: ADAIVPPEAEEVQQVPVSSHWPW*ASANRN
Trigger: GTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGA...ACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGCATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCCAGGCTTGGAGATGGTaGCTAGGGAGTTCTGAACTA +
Preference number: 4 (lower is better)
Translates to: EEVQQVPVSLLQHEVLPAQAWRW*LGSSEL
Trigger: TAGTTCAGAACTCCCTAGTCACCATCTCCAAGCCTG...GGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp AAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGCAGGCTTGGAGATGGTaGCTAGGGAGTTCTGAACTA +
Preference number: 4 (lower is better)
Translates to: KRFSRYQSVSSSMKCSPPQAWRW*LGSSEL
Trigger: TAGTTCAGAACTCCCTAGTCACCATCTCCAAGCCTG...CGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTACCACCTCGCGCCGGTaGCTCAGCCCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVTTSRR*LSPSSL
Trigger: CAAGCTGCTGGGGCTGAGGCACCGGCGCGAGGTGGT...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGCCACAGACCACAGGCTaGCTTGGGCCCCGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: HLFLGSYHSHLLQYAVMLPQTTG*LGPRLV
Trigger: CACTAGCCGGGGCCCAAGGCAGCCTGTGGTCTGTGG...CAACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGCTAATTCCTCTAGGTaGCAAGGAAGAGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHANSSR*QGRASL
Trigger: GAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCTCTCTTGTTTCTGTTaGTCCATCCAGCAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: YQSVSSSMKCSPPKMALLLSCFC*SIQQLD
Trigger: GTCAAGCTGCTGGATGGAGCAACAGAAACAAGAGAG...CAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS-3UTR CCA 90 bp GAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCGGTCCAAAGTGCTGCTaGAGAAAATGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EAEEVQQVPVSLLQHEVLGPKCC*RKWATA
Trigger: TGCTGTGGCCCATTTTCTCCAGCAGCACTTTGGACC...GAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
CDS-3UTR CCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCTCACAGAGGTCACTGTaGCATGGATCACATTGGCCT +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMISQRSL*HGSHWP
Trigger: AGGCCAATGTGATCCATGCCACAGTGACCTCTGTGA...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp TGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCAGCAAGGCCACATTCTTaGCAGCCACGGCCATCACCT +
Preference number: 4 (lower is better)
Translates to: WLIPLGAKEELPSSYSLAARPHS*QPRPSP
Trigger: AGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGC...TGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGGGTCAGAAAGAAGCCTaGTGGGCGAGCATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: IVPPEAEEVQQVPVSLLQGQKEA*WASMAY
Trigger: ATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC...CTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GAAGTCAGAGCTGTTGCCTACCTCATTCTCATACGCCACCTGGTACAGGGCTTTTCAGCCCCAGCAGCTTaGCGAAGTCCTGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: EVRAVAYLILIRHLVQGFSAPAA*RSPACA
Trigger: TGCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGA...AAAGCCCTGTACCAGGTGGCGTATGAGAATGAGGTAGGCAACAGCTCTGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp TCTGCACTGAGTAATAGGAACGGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGTCAGCCCCAGCAGCTTaGCGAAGTCCTGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: SALSNRNGTGSLAGSERGSAPAA*RSPACA
Trigger: TGCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGA...CCCTCTTTCGGACCCAGCTAAAGACCCTGTTCCGTTCCTATTACTCAGTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGGTGGACTCCCCCAGTaGGTAGAGCAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDGGLPQ*VEQLLH
Trigger: GTGGAGGAGCTGCTCTACTCACTGGGGGAGTCCACC...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACATCTTCAGTGGGGGATaGAAGTTCCCAGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GAKEELPSSYSLACFFSHIFSGG*KFPGSP
Trigger: GGGAGAGCCTGGGAACTTTCATCCCCCACTGAAGAT...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTGGGCTGCTGTGGGATaGTCCATCTTCAGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIWAAVG*SIFSGG
Trigger: TCCCCCACTGAAGATGGATCATCCCACAGCAGCCCA...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCTCTAGGGGTAAGATATaGCTGCTCTCTACCATCTGG +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMISRGKI*LLSTIW
Trigger: CCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGA...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp AGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCTACCAGGCTAACCTCTaGAGAATCCTACCCCAACAC +
Preference number: 4 (lower is better)
Translates to: RRKRFSRYQSVSSSMKCSYQANL*RILPQH
Trigger: GTGTTGGGGTAGGATTCTTCAGAGGTTAGCCTGGTA...GGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGACGAAGTCCTGCATGTaGAGGCTCAGGGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLTKSCM*RLREWK
Trigger: CTTCCACTCCCTGAGCCTGCACATGCAGGACTTCGT...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCGAAGATGGCGCTCCTaGCCACCACCTCGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: MFLFPLVARKLGDMVTTIRRWRS*PPPRAG
Trigger: ACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCG...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCGACTCAGCCACAGAGTaGTGGGTCATGTTAACAAAG +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMIDSATE*WVMLTK
Trigger: CTTTGTTAACATGACCCAGCACTCTGTGGCTGAGTC...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTCATCAATAAAGCGCTaGGTGACGCCCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GAKEELPSSYSLACFFSHSSIKR*VTPTCS
Trigger: GCTGCAGGTGGGCGTCACGCAGCGCTTTATTGATGA...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGACTGCAAAGGTTAAGTTaGTGCTGCTGTTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LIRHLVQGFPLCAVQGHRLQRLS*CCCCPG
Trigger: ACCTGGACAACAGCAGCAGCAACTTAACCTTTGCAG...TCTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp CCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCTGGGGTAAGATATGACTaGTCTCTACCATCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PGLLWDDPSSVGDESSQAGVRYD*SLPSGD
Trigger: GTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCC...AGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CTTAGGGTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGAAACAGGGTCTTTAGCTaGGTCCGAAAGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LRVWETEVGRVEVAVDQGNRVFS*VRKRGL
Trigger: CAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTT...TCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCCCTGGTGGGCGAGCATaGCTTATTCAGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIPGGRA*LIQSWA
Trigger: AGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGG...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGAGGTTGCCAGGAAGCTTaGAGATATGGTGACGACTAT +
Preference number: 4 (lower is better)
Translates to: LIRHLVQGFPLCAVQGHRGCQEA*RYGDDY
Trigger: ATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACC...TCTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR CAA 72 bp TGCAGGGTCACAGAGGTCACTGTGGCATGGATCACATaGGCCTTGGTGAGCTTCAGCAAACCGGAACAAACC +
Preference number: 4 (lower is better)
Translates to: CRVTEVTVAWIT*ALVSFSKPEQT
Trigger: GGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACCTCTGTGACCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCATAGTGCTGCTTGTTaGCTGAGATGGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ASLFLQPRMFLFPLVARKHSAAC*LRWWPS
Trigger: GCTTGGCCACCATCTCAGTCAACAAGCAGCACTATG...CTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTGGCGGGCATCGCTGCTaGCTGGCCATAGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPGGHRC*LAIAGP
Trigger: CGGGCCAGCTATGGCCAGTCAGCAGCGATGCCCGCC...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CGGTGCCTCAGCCCCAGCAGCTTGACGAAGTCCTGCATGTGCAGGCTCAGGGAGTGCATCAAATCTTTTTaGTCAATCTTGTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: RCLSPSSLTKSCMCRLRECIKSF*SILSRS
Trigger: GGACCTAGACAAGATTGATCAAAAAGATTTGATGCA...CTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGAGGCACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp CAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCTGCATCAAATCTTTTTaGTCAATCTTGTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: QSVSSSMKCSPPKMALLPCIKSF*SILSRS
Trigger: GGACCTAGACAAGATTGATCAAAAAGATTTGATGCA...GGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp CCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCTGAGATGCTTGATACATaGGGGGTCAGAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PGLLWDDPSSVGDESSQAEMLDT*GVRKKP
Trigger: AGGCTTCTTTCTGACCCCTCATGTATCAAGCATCTC...AGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACCGAGGTCCAAAGTGCTaGTGGAGAAAATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GAKEELPSSYSLACFFSHRGPKC*WRKWAT
Trigger: TGTGGCCCATTTTCTCCAGCAGCACTTTGGACCTCG...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACAGCTTGACGAAGTCCTaGATGTGCAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FPLVARKLGDMVTTIQAHSLTKS*MCRLRE
Trigger: CTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCT...GTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCCACAGACCACAGGCTaGCTTGGGCCCCGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSPQTTG*LGPRLV
Trigger: CACTAGCCGGGGCCCAAGGCAGCCTGTGGTCTGTGG...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GAAGTCAGAGCTGTTGCCTACCTCATTCTCATACGCCACCTGGTACAGGGCTTTTTCCCCTCTGTGCTGTaGAGGGTCACAGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: EVRAVAYLILIRHLVQGFFPSVL*RVTEVT
Trigger: AGTGACCTCTGTGACCCTGCACAGCACAGAGGGGAA...AAAGCCCTGTACCAGGTGGCGTATGAGAATGAGGTAGGCAACAGCTCTGACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp CTCCTCCACCCACATCTGCAGCCTCAGGAAGCTGATGCCATAGTGCCACCAGAGAGAAGTCAGAGCTGTTaGCTACCTCATTCTCATACG +
Preference number: 4 (lower is better)
Translates to: LLHPHLQPQEADAIVPPERSQSC*LPHSHT
Trigger: CGTATGAGAATGAGGTAGGCAACAGCTCTGACTTCT...CTCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGAGGTTAAGTTGCTGCTaGTGTTGTCCAGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASLFLQPRMFLFPLVARKRLSCC*CCPGAG
Trigger: CCCTGCACCTGGACAACAGCAGCAGCAACTTAACCT...CTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp AGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTAGGCTGGAAAGAGCCCTaGACGTCATCAATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RKRMANSSRCQGRASLFLGWKEP*TSSMGG
Trigger: CCCGCCCATTGATGACGTGCAGGGCTCTTTCCAGCC...TAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCTCTTTTCCCACTGGTTaGCAGGAAGCTTGGAGATAT +
Preference number: 4 (lower is better)
Translates to: AIVPPEAEEVQQVPVSLLSFPTG*QEAWRY
Trigger: ATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGA...GAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp AAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGCCTTCTTCTTTCTTCTaGTGGGATGAACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: KRFSRYQSVSSSMKCSPPPSSFF*WDEHLG
Trigger: CCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG...CGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp ATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACAAACCAGCTTATTCCCCGGCTAGTGACATaGCTCCTGCAAAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: MDHIGLGELQQTGTNQLIPRLVT*LLQRRA
Trigger: TGCCCGCCTTTGCAGGAGCCATGTCACTAGCCGGGG...AATAAGCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp AATAGGAACGGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGGCTTGGGGGACTTCATCAATGGGCGGGTaGAAGCCTGCAAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: NRNGTGSLAGSERGAWGTSSMGG*KPAKVK
Trigger: CTTAACCTTTGCAGGCTTCCACCCGCCCATTGATGA...AGTCCCCCAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTTCCGTTCCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp AGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCGAAAAGCTTAGGGTCTaGGAAACCGAAGTAGGACGA +
Preference number: 4 (lower is better)
Translates to: RRKRFSRYQSVSSSMKCSEKLRV*ETEVGR
Trigger: TCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTC...GGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGAAAAGCTTAGGGTCTaGGAAACCGAAGTAGGACGA +
Preference number: 4 (lower is better)
Translates to: VQQVPVSLLQHEVLPAEDEKLRV*ETEVGR
Trigger: TCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTC...ATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTGCAAGGCCACATTCTTaGCAGCCACGGCCATCACCT +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVARPHS*QPRPSP
Trigger: AGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGC...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCATGATCCATCTTCAGTaGGGGATGAAAGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EAEEVQQVPVSLLQHEVLMIHLQ*GMKVPR
Trigger: CCTGGGAACTTTCATCCCCCACTGAAGATGGATCAT...GAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTATGATCCATCTTCAGTaGGGGATGAAAGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GQKEAWWASMAYSVLGCCMIHLQ*GMKVPR
Trigger: CCTGGGAACTTTCATCCCCCACTGAAGATGGATCAT...ACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCCTCCCGTAGTCTTCTaGTTTCTAGCTAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMIPPVVF*FLAKKP
Trigger: TGGTTTCTTAGCTAGAAACCAGAAGACTACGGGAGG...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCAGGTGGACTCCCCCAGTaGGTAGAGCAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPGGLPQ*VEQLLH
Trigger: GTGGAGGAGCTGCTCTACTCACTGGGGGAGTCCACC...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGCGAAGTAGGACGAGTTaGGGTAGCCGTGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: HLFLGSYHSHLLQYAVMLRSRTS*GSRGPR
Trigger: CCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCG...CAACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCCTCAGCTGTCTGCACTaGGTAATAGGAACGGAACAG +
Preference number: 4 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSLSCLH*VIGTEQ
Trigger: CTGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAG...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGCTCACAGTTCAGTCTTaGCCTTGTGCATCAAATCTT +
Preference number: 4 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLLTVQS*PCASNL
Trigger: AAGATTTGATGCACAAGGTCAAGACTGAACTGTGAG...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp TGGAAAGAGCCCTGCACGTCATCAATGGGCGGGTGGAAGCCTGCAAAGGTTAAGGAGATGCTTGATACATaGGGGGTCAGAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: WKEPCTSSMGGWKPAKVKEMLDT*GVRKKP
Trigger: AGGCTTCTTTCTGACCCCTCATGTATCAAGCATCTC...CTTAACCTTTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGGGCTCTTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGTCACCTGGAGATGCTTaGTACATGAGGGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GEHGLFSPGLLWDDPSSVSPGDA*YMRGQK
Trigger: TTTCTGACCCCTCATGTATCAAGCATCTCCAGGTGA...CACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCCAGGCTTGGAGATGGTaGCTAGGGAGTTCTGAACTA +
Preference number: 4 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSQAWRW*LGSSEL
Trigger: TAGTTCAGAACTCCCTAGTCACCATCTCCAAGCCTG...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCAAGCAAAGGCAAACCTaGAAACTGCTGCCTACTATA +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMIKQRQT*KLLPTI
Trigger: TATAGTAGGCAGCAGTTTTCAGGTTTGCCTTTGCTT...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514349.1
CDS-3UTR GCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCCGAGGTCCAAAGTGCTaGTGGAGAAAATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIRGPKC*WRKWAT
Trigger: TGTGGCCCATTTTCTCCAGCAGCACTTTGGACCTCG...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGACGAAGTCCTGCATGTaGAGGCTCAGGGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGTKSCM*RLREWK
Trigger: CTTCCACTCCCTGAGCCTGCACATGCAGGACTTCGT...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTTCCTCCACCCACATCTaGAGCCTCAGGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVSSTHI*SLRKLM
Trigger: CATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAGGA...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTTTCCCCTCTGTGCTGTaGAGGGTCACAGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVFPSVL*RVTEVT
Trigger: AGTGACCTCTGTGACCCTGCACAGCACAGAGGGGAA...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TCTGCACTGAGTAATAGGAACGGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGAGGTTAAGTTGCTGCTaGTGTTGTCCAGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SALSNRNGTGSLAGSERGRLSCC*CCPGAG
Trigger: CCCTGCACCTGGACAACAGCAGCAGCAACTTAACCT...CCCTCTTTCGGACCCAGCTAAAGACCCTGTTCCGTTCCTATTACTCAGTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp ACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGCTGACTGGCCATAGCTaGCCCGCAGGACAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: THLFLGSYHSHLLQYAVMLTGHS*PAGQQK
Trigger: TTTCTGCTGTCCTGCGGGCCAGCTATGGCCAGTCAG...CATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCGAGGTCACTGTGGCATaGATCACATTGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIEVTVA*ITLALV
Trigger: CACCAAGGCCAATGTGATCCATGCCACAGTGACCTC...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAAGTCAGAGCTGTTGCCTACCTCATTCTCATACGCCACCTGGTACAGGGCTTTAACAGGGTCTTTAGCTaGGTCCGAAAGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EVRAVAYLILIRHLVQGFNRVFS*VRKRGL
Trigger: CAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTT...AAAGCCCTGTACCAGGTGGCGTATGAGAATGAGGTAGGCAACAGCTCTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCAACAGGGTCTTTAGCTaGGTCCGAAAGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLVARKLGDMVTTIQAHINRVFS*VRKRGL
Trigger: CAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTT...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAAGTCAGAGCTGTTGCCTACCTCATTCTCATACGCCACCTGGTACAGGGCTTTAGTCCTGGGCTGCTGTaGGATGATCCATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: EVRAVAYLILIRHLVQGFSPGLL*DDPSSV
Trigger: CACTGAAGATGGATCATCCCACAGCAGCCCAGGACT...AAAGCCCTGTACCAGGTGGCGTATGAGAATGAGGTAGGCAACAGCTCTGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp TTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACGGTCAGAAAGAAGCCTaGTGGGCGAGCATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: FPLVARKLGDMVTTIQAHGQKEA*WASMAY
Trigger: ATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC...GTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCGGTCAGAAAGAAGCCTaGTGGGCGAGCATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIGQKEA*WASMAY
Trigger: ATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGGCAGCAGCCGCCGTGTaGACCCTTAATATAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGAAAAV*TLNIGR
Trigger: TCTGCCTATATTAAGGGTCCACACGGCGGCTGCTGC...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCTGCTCTCTACCATCTaGGGACTTCTCTTCTTTATA +
Preference number: 4 (lower is better)
Translates to: AIVPPEAEEVQQVPVSLLLLSTI*GLLFFI
Trigger: TATAAAGAAGAGAAGTCCCCAGATGGTAGAGAGCAG...GAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp CTCCTCCACCCACATCTGCAGCCTCAGGAAGCTGATGCCATAGTGCCACCAGAGTCTTCTTTCTTCTGCTaGGATGAACATCTAGGGGTA +
Preference number: 4 (lower is better)
Translates to: LLHPHLQPQEADAIVPPESSFFC*DEHLGV
Trigger: TACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGA...CTCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTGTGCTGCTTGTTGACTaGGATGGTGGCCAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: MFLFPLVARKLGDMVTTIVLLVD*DGGQAA
Trigger: GGCCGCTTGGCCACCATCTCAGTCAACAAGCAGCAC...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGTCACCTGGAGATGCTTaGTACATGAGGGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLSPGDA*YMRGQK
Trigger: TTTCTGACCCCTCATGTATCAAGCATCTCCAGGTGA...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTCACCTGGAGATGCTTaGTACATGAGGGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSSPGDA*YMRGQK
Trigger: TTTCTGACCCCTCATGTATCAAGCATCTCCAGGTGA...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GGTCACTGTGGCATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACAAGCTTGGAGATATGGTaGCGACTATTCAGGCACACA +
Preference number: 4 (lower is better)
Translates to: GHCGMDHIGLGELQQTGTSLEIW*RLFRHT
Trigger: TGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCT...TGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGTCTAGGGGTAAGATATaGCTGCTCTCTACCATCTGG +
Preference number: 4 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLSRGKI*LLSTIW
Trigger: CCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGA...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp TTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACTACCAGGCTAACCTCTaGAGAATCCTACCCCAACAC +
Preference number: 4 (lower is better)
Translates to: FPLVARKLGDMVTTIQAHYQANL*RILPQH
Trigger: GTGTTGGGGTAGGATTCTTCAGAGGTTAGCCTGGTA...GTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGACGAAGTCCTGCATGTaGAGGCTCAGGGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: THLFLGSYHSHLLQYAVMTKSCM*RLREWK
Trigger: CTTCCACTCCCTGAGCCTGCACATGCAGGACTTCGT...CATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp AGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTAACGAAGTCCTGCATGTaGAGGCTCAGGGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RKRMANSSRCQGRASLFLTKSCM*RLREWK
Trigger: CTTCCACTCCCTGAGCCTGCACATGCAGGACTTCGT...TAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGAGAAGTCAGAGCTGTTaGCTACCTCATTCTCATACG +
Preference number: 4 (lower is better)
Translates to: GEHGLFSPGLLWDDPSSVRSQSC*LPHSHT
Trigger: CGTATGAGAATGAGGTAGGCAACAGCTCTGACTTCT...CACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTAGGTTAAGTTGCTGCTaGTGTTGTCCAGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVRLSCC*CCPGAG
Trigger: CCCTGCACCTGGACAACAGCAGCAGCAACTTAACCT...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCAGGCTGGAAAGAGCCCTaGACGTCATCAATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPGWKEP*TSSMGG
Trigger: CCCGCCCATTGATGACGTGCAGGGCTCTTTCCAGCC...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGCATTCCTCAATCTTTaGATAAGGAAGAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: EEVQQVPVSLLQHEVLPAAFLNL*IRKRMA
Trigger: AGCCATTCTCTTCCTTATGCAAAGATTGAGGAATGC...GGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGCCTTCTTCTTTCTTCTaGTGGGATGAACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: GEHGLFSPGLLWDDPSSVPSSFF*WDEHLG
Trigger: CCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG...CACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GGTCACTGTGGCATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACATCAGCCACAGAGTGCTaGGTCATGTTAACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: GHCGMDHIGLGELQQTGTSATEC*VMLTKV
Trigger: CACCTTTGTTAACATGACCCAGCACTCTGTGGCTGA...TGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511945.5
CDS-3UTR CCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTTTCTCATACGCCACCTaGTACAGGGCTTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVFSYAT*YRAFPS
Trigger: AGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAA...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGTTCTCATACGCCACCTaGTACAGGGCTTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGFSYAT*YRAFPS
Trigger: AGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAA...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCAAACAGCTGCCTCCTaGGGCTGCTTTCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSQTAAS*GCFRRK
Trigger: CTTCCGGCGAAAGCAGCCCCAGGAGGCAGCTGTTTG...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCTGGGGACTTCTCTTCTTCCGAAAGAGGGGCTTaGGGGACTGGACTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: EHLGVRYDCSLPSGDFSSSERGA*GTGLAK
Trigger: TTTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGA...AGAAGAGAAGTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTAACAGGGTCTTTAGCTaGGTCCGAAAGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVNRVFS*VRKRGL
Trigger: CAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTT...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp AGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTAGCAGCAGCCGCCGTGTaGACCCTTAATATAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RKRMANSSRCQGRASLFLAAAAV*TLNIGR
Trigger: TCTGCCTATATTAAGGGTCCACACGGCGGCTGCTGC...TAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGGGTTGCCAGGAAGCTTaGAGATATGGTGACGACTAT +
Preference number: 4 (lower is better)
Translates to: ASLFLQPRMFLFPLVARKGCQEA*RYGDDY
Trigger: ATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACC...CTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GATGCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTGCTCTCTACCATCTaGGGACTTCTCTTCTTTATA +
Preference number: 4 (lower is better)
Translates to: DAIVPPEAEEVQQVPVSLLLSTI*GLLFFI
Trigger: TATAAAGAAGAGAAGTCCCCAGATGGTAGAGAGCAG...GAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CCA 90 bp GTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATTCTTCTTTCTTCTGCTaGGATGAACATCTAGGGGTA +
Preference number: 4 (lower is better)
Translates to: VQQVPVSLLQHEVLPAEDSSFFC*DEHLGV
Trigger: TACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGA...ATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
3UTR CAA 72 bp GTCACAGAGGTCACTGTGGCATGGATCACATTGGCCTaGGTGAGCTTCAGCAAACCGGAACAAACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: VTEVTVAWITLA*VSFSKPEQTSL
Trigger: TAAGCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCATGCCACAGTGACCTCTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp AGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTACATAGTGCTGCTTGTTaGCTGAGATGGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RKRMANSSRCQGRASLFLHSAAC*LRWWPS
Trigger: GCTTGGCCACCATCTCAGTCAACAAGCAGCACTATG...TAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTGCAGCCTCAGGAAGCTaGTGCCATAGTGCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSAASGS*CHSATR
Trigger: TCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGC...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp ACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTCACATTGGCCTTGGTaGGCTTCAGCAAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: THLFLGSYHSHLLQYAVMSHWPW*ASANRN
Trigger: GTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGA...CATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp ATGGATCACATTGGCCTTGGTGAGCTTCAGCAAACCGGAACAAACCAGCTTATTATCTTCAGTGGGGGATaGAAGTTCCCAGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: MDHIGLGELQQTGTNQLIIFSGG*KFPGSP
Trigger: GGGAGAGCCTGGGAACTTTCATCCCCCACTGAAGAT...AATAAGCTGGTTTGTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCAGTAACCAGGAGCTATaGTCATTTCTTAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: EAWWASMAYSVLGCCGMISNQEL*SFLRFS
Trigger: AGAAAACCTAAGAAATGATCATAGCTCCTGGTTACT...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCAGTAACCAGGAGCTATaGTCATTTCTTAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AIVPPEAEEVQQVPVSLLSNQEL*SFLRFS
Trigger: AGAAAACCTAAGAAATGATCATAGCTCCTGGTTACT...GAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp GAAGTCAGAGCTGTTGCCTACCTCATTCTCATACGCCACCTGGTACAGGGCTTTTCTAGGGGTAAGATATaGCTGCTCTCTACCATCTGG +
Preference number: 4 (lower is better)
Translates to: EVRAVAYLILIRHLVQGFSRGKI*LLSTIW
Trigger: CCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGA...AAAGCCCTGTACCAGGTGGCGTATGAGAATGAGGTAGGCAACAGCTCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR TCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGTACCAGGCTAACCTCTaGAGAATCCTACCCCAACAC +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGYQANL*RILPQH
Trigger: GTGTTGGGGTAGGATTCTTCAGAGGTTAGCCTGGTA...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCTGGGGACTTCTCTTCTACCCGAGGTCCAAAGTaGTGCTGGAGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: EHLGVRYDCSLPSGDFSSTRGPK*CWRKWA
Trigger: GGCCCATTTTCTCCAGCAGCACTTTGGACCTCGGGT...AGAAGAGAAGTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCTGGGGACTTCTCTTCTTCGTACACGTCGATCTaGACCCGAGGTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: EHLGVRYDCSLPSGDFSSSYTSI*TRGPKC
Trigger: GCACTTTGGACCTCGGGTGCAGATCGACGTGTACGA...AGAAGAGAAGTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCCGAAGATGGCGCTCCTaGCCACCACCTCGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVRRWRS*PPPRAG
Trigger: ACCGGCGCGAGGTGGTGGGCAGGAGCGCCATCTTCG...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCTGGGGACTTCTCTTCTTCCTCCACCCACATCTaGAGCCTCAGGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: EHLGVRYDCSLPSGDFSSSSTHI*SLRKLM
Trigger: CATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAGGA...AGAAGAGAAGTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCAAGAAGTCAGAGCTGTTaGCTACCTCATTCTCATACG +
Preference number: 4 (lower is better)
Translates to: WLIPLGAKEELPSSYSLARSQSC*LPHSHT
Trigger: CGTATGAGAATGAGGTAGGCAACAGCTCTGACTTCT...TGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCCTGCAAAGGTTAAGTTaGTGCTGCTGTTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PLVARKLGDMVTTIQAHILQRLS*CCCCPG
Trigger: ACCTGGACAACAGCAGCAGCAACTTAACCTTTGCAG...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GAAGTCAGAGCTGTTGCCTACCTCATTCTCATACGCCACCTGGTACAGGGCTTTCTGCAAAGGTTAAGTTaGTGCTGCTGTTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EVRAVAYLILIRHLVQGFLQRLS*CCCCPG
Trigger: ACCTGGACAACAGCAGCAGCAACTTAACCTTTGCAG...AAAGCCCTGTACCAGGTGGCGTATGAGAATGAGGTAGGCAACAGCTCTGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GAAAAGCTTAGGGTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACTCTTTTCCCACTGGTTaGCAGGAAGCTTGGAGATAT +
Preference number: 4 (lower is better)
Translates to: EKLRVWETEVGRVEVAVDSFPTG*QEAWRY
Trigger: ATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGA...GTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR GCA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGGCATTCCTCAATCTTTaGATAAGGAAGAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRAFLNL*IRKRMA
Trigger: AGCCATTCTCTTCCTTATGCAAAGATTGAGGAATGC...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGGGGGTAAGATATGACTaGTCTCTACCATCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGGVRYD*SLPSGD
Trigger: GTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCC...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp GAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCTGGGGACTTCTCTTCTCACTTTGTATCCTCCTaGGCTGGTGGTTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: EHLGVRYDCSLPSGDFSSHFVSS*AGGSQV
Trigger: CACCTGGGAACCACCAGCGCAGGAGGATACAAAGTG...AGAAGAGAAGTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514349.1
CDS-3UTR CCA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCCCCCGGCTAGTGACATaGCTCCTGCAAAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLIPRLVT*LLQRRA
Trigger: TGCCCGCCTTTGCAGGAGCCATGTCACTAGCCGGGG...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCGACCACAGGCTGCCTTaGGCCCCGGCTAGTGACATG +
Preference number: 4 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFDHRLP*APASDM
Trigger: CATGTCACTAGCCGGGGCCCAAGGCAGCCTGTGGTC...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTTCACAGAGGTCACTGTaGCATGGATCACATTGGCCT +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVSQRSL*HGSHWP
Trigger: AGGCCAATGTGATCCATGCCACAGTGACCTCTGTGA...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCAGGGGCTTGGGGGACTaGACTCGCCAAACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLIRGLGD*TRQTAA
Trigger: GGCAGCTGTTTGGCGAGTCCAGTCCCCCAAGCCCCT...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTTCCGAAAGAGGGGCTTaGGGGACTGGACTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSSERGA*GTGLAK
Trigger: TTTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGA...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCCGAAAGAGGGGCTTaGGGGACTGGACTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPSERGA*GTGLAK
Trigger: TTTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGA...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGAGTCCTGGGCTGCTGTaGGATGATCCATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: HLFLGSYHSHLLQYAVMLSPGLL*DDPSSV
Trigger: CACTGAAGATGGATCATCCCACAGCAGCCCAGGACT...CAACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACCCTCCCGTAGTCTTCTaGTTTCTAGCTAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: GAKEELPSSYSLACFFSHPPVVF*FLAKKP
Trigger: TGGTTTCTTAGCTAGAAACCAGAAGACTACGGGAGG...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTGTGCTGCTTGTTGACTaGGATGGTGGCCAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPVLLVD*DGGQAA
Trigger: GGCCGCTTGGCCACCATCTCAGTCAACAAGCAGCAC...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCCAGTCTCCTCCAGCATaGAGTGCTCCCCGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFQSPPA*SAPRRR
Trigger: TCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTG...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTTCACATTGGCCTTGGTaGGCTTCAGCAAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVSHWPW*ASANRN
Trigger: GTTCCGGTTTGCTGAAGCTCACCAAGGCCAATGTGA...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTAGCTTGGAGATATGGTaGCGACTATTCAGGCACACA +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVSLEIW*RLFRHT
Trigger: TGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCT...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTCCTCCAGCATGAAGTaGTCCCCGCCGAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFSSSMK*SPPKMA
Trigger: CGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGA...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTGACTCAGCCACAGAGTaGTGGGTCATGTTAACAAAG +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVDSATE*WVMLTK
Trigger: CTTTGTTAACATGACCCAGCACTCTGTGGCTGAGTC...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTTCATCAATAAAGCGCTaGGTGACGCCCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSSSIKR*VTPTCS
Trigger: GCTGCAGGTGGGCGTCACGCAGCGCTTTATTGATGA...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCGGCTGGAAAGAGCCCTaGACGTCATCAATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLIGWKEP*TSSMGG
Trigger: CCCGCCCATTGATGACGTGCAGGGCTCTTTCCAGCC...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTTATTCAGTCCTGGGCTaGTGTGGGATGATCCATCTT +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVYSVLG*CGMIHL
Trigger: AAGATGGATCATCCCACAGCAGCCCAGGACTGAATA...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGTATTCAGTCCTGGGCTaGTGTGGGATGATCCATCTT +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGYSVLG*CGMIHL
Trigger: AAGATGGATCATCCCACAGCAGCCCAGGACTGAATA...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp AGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTAGCTAATTCCTCTAGGTaGCAAGGAAGAGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RKRMANSSRCQGRASLFLANSSR*QGRASL
Trigger: GAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGC...TAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGGGGGTAAGATATGACTaGTCTCTACCATCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: THLFLGSYHSHLLQYAVMGVRYD*SLPSGD
Trigger: GTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCC...CATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATTCATCAATGGGCGGGTaGAAGCCTGCAAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDSSMGG*KPAKVK
Trigger: CTTAACCTTTGCAGGCTTCCACCCGCCCATTGATGA...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCGAGACGACGGTGGGCTaGAAAGAGCCCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFETTVG*KEPCTS
Trigger: TGACGTGCAGGGCTCTTTCCAGCCCACCGTCGTCTC...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCCAAACAGCTGCCTCCTaGGGCTGCTTTCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFQTAAS*GCFRRK
Trigger: CTTCCGGCGAAAGCAGCCCCAGGAGGCAGCTGTTTG...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTCACCTCCACGGAGCTaGCCGCCCACTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVSPPRS*PPTPGH
Trigger: ATGCCCTGGAGTGGGCGGCCAGCTCCGTGGAGGTGA...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCTGGGGACTTCTCTTCTAGTCCTGGGCTGCTGTaGGATGATCCATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: EHLGVRYDCSLPSGDFSSSPGLL*DDPSSV
Trigger: CACTGAAGATGGATCATCCCACAGCAGCCCAGGACT...AGAAGAGAAGTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATCAGAAAGAAGCCTGGTaGGCGAGCATGGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDQKEAW*ASMAYS
Trigger: TGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTG...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGTGTTTCTTTTCCCACTaGTTGCCAGGAAGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGCFFSH*LPGSLE
Trigger: CTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACA...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTTGTTTCTTTTCCCACTaGTTGCCAGGAAGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVCFFSH*LPGSLE
Trigger: CTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACA...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
3UTR CAA 72 bp GATATGGTGACGACTATTCAGGCACACATCTCTTCCTaGGGTCCTACCACAGTCATCTCCTCCAATATGCAG +
Preference number: 4 (lower is better)
Translates to: DMVTTIQAHISS*GPTTVISSNMQ
Trigger: CTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCCGAAGTAGGACGAGTTaGGGTAGCCGTGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLIRSRTS*GSRGPR
Trigger: CCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCG...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp ACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGGAGATGCTTGATACATaGGGGGTCAGAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: THLFLGSYHSHLLQYAVMEMLDT*GVRKKP
Trigger: AGGCTTCTTTCTGACCCCTCATGTATCAAGCATCTC...CATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp AGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTAAGCTTGGAGATATGGTaGCGACTATTCAGGCACACA +
Preference number: 4 (lower is better)
Translates to: RKRMANSSRCQGRASLFLSLEIW*RLFRHT
Trigger: TGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCT...TAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCGAGGTCCAAAGTGCTaGTGGAGAAAATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSRGPKC*WRKWAT
Trigger: TGTGGCCCATTTTCTCCAGCAGCACTTTGGACCTCG...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGGACTCAGCCACAGAGTaGTGGGTCATGTTAACAAAG +
Preference number: 4 (lower is better)
Translates to: HLFLGSYHSHLLQYAVMLDSATE*WVMLTK
Trigger: CTTTGTTAACATGACCCAGCACTCTGTGGCTGAGTC...CAACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTCTGACTGGCCATAGCTaGCCCGCAGGACAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPLTGHS*PAGQQK
Trigger: TTTCTGCTGTCCTGCGGGCCAGCTATGGCCAGTCAG...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTTCATCAATGGGCGGGTaGAAGCCTGCAAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVSSMGG*KPAKVK
Trigger: CTTAACCTTTGCAGGCTTCCACCCGCCCATTGATGA...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGGAAAAGCTTAGGGTCTaGGAAACCGAAGTAGGACGA +
Preference number: 4 (lower is better)
Translates to: THLFLGSYHSHLLQYAVMEKLRV*ETEVGR
Trigger: TCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTC...CATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATATGATCCATCTTCAGTaGGGGATGAAAGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDMIHLQ*GMKVPR
Trigger: CCTGGGAACTTTCATCCCCCACTGAAGATGGATCAT...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTCAGAAAGAAGCCTGGTaGGCGAGCATGGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVQKEAW*ASMAYS
Trigger: TGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTG...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp AGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTAGGTTGCCAGGAAGCTTaGAGATATGGTGACGACTAT +
Preference number: 4 (lower is better)
Translates to: RKRMANSSRCQGRASLFLGCQEA*RYGDDY
Trigger: ATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACC...TAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGTGTTTCTTTTCCCACTaGTTGCCAGGAAGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: HLFLGSYHSHLLQYAVMLCFFSH*LPGSLE
Trigger: CTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACA...CAACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCACTCAGCTGTCTGCACTaGGTAATAGGAACGGAACAG +
Preference number: 4 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPLSCLH*VIGTEQ
Trigger: CTGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAG...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACAGTAACCAGGAGCTATaGTCATTTCTTAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GAKEELPSSYSLACFFSHSNQEL*SFLRFS
Trigger: AGAAAACCTAAGAAATGATCATAGCTCCTGGTTACT...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCTTGGAGATGGTaGCTAGGGAGTTCTGAACTA +
Preference number: 4 (lower is better)
Translates to: MFLFPLVARKLGDMVTTIQAWRW*LGSSEL
Trigger: TAGTTCAGAACTCCCTAGTCACCATCTCCAAGCCTG...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTTCTAGGGGTAAGATATaGCTGCTCTCTACCATCTGG +
Preference number: 4 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVSRGKI*LLSTIW
Trigger: CCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGA...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCATACCAGGCTAACCTCTaGAGAATCCTACCCCAACAC +
Preference number: 4 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPYQANL*RILPQH
Trigger: GTGTTGGGGTAGGATTCTTCAGAGGTTAGCCTGGTA...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAAACCCGAGGTCCAAAGTaGTGCTGGAGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKTRGPK*CWRKWA
Trigger: GGCCCATTTTCTCCAGCAGCACTTTGGACCTCGGGT...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAAAGCTTGACGAAGTCCTaGATGTGCAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKSLTKS*MCRLRE
Trigger: CTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCT...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAATTCCCCTCTGTGCTGTaGAGGGTCACAGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKFPSVL*RVTEVT
Trigger: AGTGACCTCTGTGACCCTGCACAGCACAGAGGGGAA...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCCTCTGTGCTGTaGAGGGTCACAGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLIFPSVL*RVTEVT
Trigger: AGTGACCTCTGTGACCCTGCACAGCACAGAGGGGAA...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCGGGCTTTCCCCTCTGTaGTGTGCAGGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVGLSPL*CAGSQR
Trigger: CCTCTGTGACCCTGCACAGCACAGAGGGGAAAGCCC...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATCCTTCTTCTTTCTTCTaGTGGGATGAACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDPSSFF*WDEHLG
Trigger: CCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTTCTACTGCAAGGCCACATTCTTaGCAGCCACGGCCATCACCT +
Preference number: 4 (lower is better)
Translates to: TVTRSYDHFLGFLIFPSTARPHS*QPRPSP
Trigger: AGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGC...AGTAGAAGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGGTTGCCAGGAAGCTTaGAGATATGGTGACGACTAT +
Preference number: 4 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVGCQEA*RYGDDY
Trigger: ATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACC...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp GAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCTGGGGACTTCTCTTCTTGTTTCTTTTCCCACTaGTTGCCAGGAAGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EHLGVRYDCSLPSGDFSSCFFSH*LPGSLE
Trigger: CTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACA...AGAAGAGAAGTCCCCAGATGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGCTGCTCTCTACCATCTaGGGACTTCTCTTCTTTATA +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGLLSTI*GLLFFI
Trigger: TATAAAGAAGAGAAGTCCCCAGATGGTAGAGAGCAG...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCCATAGTGCTGCTTGTTaGCTGAGATGGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFHSAAC*LRWWPS
Trigger: GCTTGGCCACCATCTCAGTCAACAAGCAGCACTATG...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTCATAGTGCTGCTTGTTaGCTGAGATGGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPHSAAC*LRWWPS
Trigger: GCTTGGCCACCATCTCAGTCAACAAGCAGCACTATG...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTAGCTTGGAGATATGGTaGCGACTATTCAGGCACACA +
Preference number: 4 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSSLEIW*RLFRHT
Trigger: TGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCT...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAACGAGGTCCAAAGTGCTaGTGGAGAAAATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKRGPKC*WRKWAT
Trigger: TGTGGCCCATTTTCTCCAGCAGCACTTTGGACCTCG...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCATATTCAGTCCTGGGCTaGTGTGGGATGATCCATCTT +
Preference number: 4 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPYSVLG*CGMIHL
Trigger: AAGATGGATCATCCCACAGCAGCCCAGGACTGAATA...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGGCATTCCTCAATCTTTaGATAAGGAAGAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGAFLNL*IRKRMA
Trigger: AGCCATTCTCTTCCTTATGCAAAGATTGAGGAATGC...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAATTCTCATACGCCACCTaGTACAGGGCTTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKFSYAT*YRAFPS
Trigger: AGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAA...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCCCTGCACGTCATCAATaGGCGGGTGGAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVPARHQ*AGGSLQ
Trigger: TTGCAGGCTTCCACCCGCCCATTGATGACGTGCAGG...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTGCTGCTCTCTACCATCTaGGGACTTCTCTTCTTTATA +
Preference number: 4 (lower is better)
Translates to: HLFLGSYHSHLLQYAVMLLLSTI*GLLFFI
Trigger: TATAAAGAAGAGAAGTCCCCAGATGGTAGAGAGCAG...CAACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATTCTTCTTTCTTCTGCTaGGATGAACATCTAGGGGTA +
Preference number: 4 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDSSFFC*DEHLGV
Trigger: TACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGA...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTCTCAGCTGTCTGCACTaGGTAATAGGAACGGAACAG +
Preference number: 4 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPLSCLH*VIGTEQ
Trigger: CTGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAG...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTCTCACAGTTCAGTCTTaGCCTTGTGCATCAAATCTT +
Preference number: 4 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVLTVQS*PCASNL
Trigger: AAGATTTGATGCACAAGGTCAAGACTGAACTGTGAG...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTAGAAGTCAGAGCTGTTaGCTACCTCATTCTCATACG +
Preference number: 4 (lower is better)
Translates to: MFLFPLVARKLGDMVTTIRSQSC*LPHSHT
Trigger: CGTATGAGAATGAGGTAGGCAACAGCTCTGACTTCT...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCATCTTTTCCCACTGGTTaGCAGGAAGCTTGGAGATAT +
Preference number: 4 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPSFPTG*QEAWRY
Trigger: ATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGA...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTCACAGAGGTCACTGTaGCATGGATCACATTGGCCT +
Preference number: 4 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFSQRSL*HGSHWP
Trigger: AGGCCAATGTGATCCATGCCACAGTGACCTCTGTGA...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCCTCCCGTAGTCTTCTaGTTTCTAGCTAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: MFLFPLVARKLGDMVTTIPPVVF*FLAKKP
Trigger: TGGTTTCTTAGCTAGAAACCAGAAGACTACGGGAGG...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATAGTAACCAGGAGCTATaGTCATTTCTTAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDSNQEL*SFLRFS
Trigger: AGAAAACCTAAGAAATGATCATAGCTCCTGGTTACT...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCCTGCAAAGGTTAAGTTaGTGCTGCTGTTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLILQRLS*CCCCPG
Trigger: ACCTGGACAACAGCAGCAGCAACTTAACCTTTGCAG...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAATCAGCCACAGAGTGCTaGGTCATGTTAACAAAGGTG +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKSATEC*VMLTKV
Trigger: CACCTTTGTTAACATGACCCAGCACTCTGTGGCTGA...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000274569.9
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCCTCAGCTGTCTGCACTaGGTAATAGGAACGGAACAG +
Preference number: 4 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVLSCLH*VIGTEQ
Trigger: CTGTTCCGTTCCTATTACTCAGTGCAGACAGCTGAG...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTCTTTTCCCACTGGTTaGCAGGAAGCTTGGAGATAT +
Preference number: 4 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFSFPTG*QEAWRY
Trigger: ATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGA...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAACCTTCTTCTTTCTTCTaGTGGGATGAACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKPSSFF*WDEHLG
Trigger: CCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAACCTCCCGTAGTCTTCTaGTTTCTAGCTAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKPPVVF*FLAKKP
Trigger: TGGTTTCTTAGCTAGAAACCAGAAGACTACGGGAGG...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTCTCACAGTTCAGTCTTaGCCTTGTGCATCAAATCTT +
Preference number: 4 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPLTVQS*PCASNL
Trigger: AAGATTTGATGCACAAGGTCAAGACTGAACTGTGAG...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR TCA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCCTCACAGTTCAGTCTTaGCCTTGTGCATCAAATCTT +
Preference number: 4 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLILTVQS*PCASNL
Trigger: AAGATTTGATGCACAAGGTCAAGACTGAACTGTGAG...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCGAAAAGCTTAGGGTCTaGGAAACCGAAGTAGGACGA +
Preference number: 4 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVEKLRV*ETEVGR
Trigger: TCGTCCTACTTCGGTTTCCCAGACCCTAAGCTTTTC...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CCA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCATGATCCATCTTCAGTaGGGGATGAAAGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVMIHLQ*GMKVPR
Trigger: CCTGGGAACTTTCATCCCCCACTGAAGATGGATCAT...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTTCTACTGGCAAACCTGAAAACTaGTGCCTACTATACTTTCGT +
Preference number: 4 (lower is better)
Translates to: TVTRSYDHFLGFLIFPSTGKPEN*CLLYFR
Trigger: ACGAAAGTATAGTAGGCAGCAGTTTTCAGGTTTGCC...AGTAGAAGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514349.1
CDS-3UTR TCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAATGCATCAAATCTTTTTaGTCAATCTTGTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKCIKSF*SILSRS
Trigger: GGACCTAGACAAGATTGATCAAAAAGATTTGATGCA...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR GCA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAAAAACCTGAAAACTGCTaGCTACTATACTTTCGTTTC +
Preference number: 4 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKKPENC*LLYFRF
Trigger: GAAACGAAAGTATAGTAGGCAGCAGTTTTCAGGTTT...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514349.1
CDS-3UTR TCA 90 bp ACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTTCTACTTGCATCAAATCTTTTTaGTCAATCTTGTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: TVTRSYDHFLGFLIFPSTCIKSF*SILSRS
Trigger: GGACCTAGACAAGATTGATCAAAAAGATTTGATGCA...AGTAGAAGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS CCA 90 bp CACATGAGGTGGGCATTGTACACGGCTGGCTGCAGATGGCTGCGGTaGAGGGCTGGCTGCCTCCTTCAGAGGGGGCCTTGTTCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: HMRWALYTAGCRWLR*RAGCLLQRGPCSAL
Trigger: GAGAGCAGAACAAGGCCCCCTCTGAAGGAGGCAGCCAGCCCTCCACCGCAGCCATCTGCAGCCAGCCGTGTACAATGCCCACCTCATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS GCA 90 bp GTGGCCAAGCGGCCACCCACGGTTCCCTTCTCGTACACGTCGATCTaGACCCGAGGTCCAAAGTGCTGCTGGAGAAAATGGGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: VAKRPPTVPFSYTSI*TRGPKCCWRKWATA
Trigger: TGCTGTGGCCCATTTTCTCCAGCAGCACTTTGGACCTCGGGTGCAGATCGACGTGTACGAGAAGGGAACCGTGGGTGGCCGCTTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000274569.9
ENST00000503240.5
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCCTCAGCCCCAGCAGCTaGACGAAGTCCTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: EEVQQVPVSLLQHEVLPALSPSS*TKSCMC
Trigger: GCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGAG...GGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCTCAGCCCCAGCAGCTaGACGAAGTCCTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: EAWWASMAYSVLGCCGMILSPSS*TKSCMC
Trigger: GCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGAG...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GTTGTAAGCCAGCAAGGCCACATTCTTGGCAGCCACGGCCATCACCTCCACGGAAGCAAGGCCACATTCTaGGCAGCCACGGCCATCACC +
Preference number: 5 (lower is better)
Translates to: VVSQQGHILGSHGHHLHGSKATF*AATAIT
Trigger: GGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCT...TCCGTGGAGGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCTGGCTTACAAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCAGCAAGGCCACATTCTaGGCAGCCACGGCCATCACC +
Preference number: 5 (lower is better)
Translates to: EAWWASMAYSVLGCCGMISKATF*AATAIT
Trigger: GGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCT...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS TCA 90 bp GGAAGCAGGGAGCACCTTCAGGAGGGACTTTGGGGAAAGGTGGAGTaGCAGCTTGGTGAACAGGGAGGGAACAGACCACTTGCCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GSREHLQEGLWGKVE*QLGEQGGNRPLALH
Trigger: GTGGAGGGCAAGTGGTCTGTTCCCTCCCTGTTCACCAAGCTGTCACTCCACCTTTCCCCAAAGTCCCTCCTGAAGGTGCTCCCTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 90 bp AGGCTGGAAGCAGGGAGCACCTTCAGGAGGGACTTTGGGGAAAGGTaGAGTGACAGCTTGGTGAACAGGGAGGGAACAGACCACTTGCCC +
Preference number: 5 (lower is better)
Translates to: RLEAGSTFRRDFGER*SDSLVNREGTDHLP
Trigger: GGGCAAGTGGTCTGTTCCCTCCCTGTTCACCAAGCTGTCACTCCACCTTTCCCCAAAGTCCCTCCTGAAGGTGCTCCCTGCTTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 90 bp TGCCTGGGAGGCCCACCAGGAACCCATCACTTCCTCTACATGGAGTaGTGGCAGAAGAGGCTGGTCATGTTCCCTGGCACCTGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: CLGGPPGTHHFLYME*WQKRLVMFPGTCSL
Trigger: CAGAGAACAGGTGCCAGGGAACATGACCAGCCTCTTCTGCCACCACTCCATGTAGAGGAAGTGATGGGTTCCTGGTGGGCCTCCCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 90 bp CTGGAGTCCTTGTGCAGGAAGGCTTTTTGCCTGACCACCTGCCCCTaGGTTATAGTGCCTGGGAGGCCCACCAGGAACCCATCACTTCCT +
Preference number: 5 (lower is better)
Translates to: LESLCRKAFCLTTCP*VIVPGRPTRNPSLP
Trigger: AGGAAGTGATGGGTTCCTGGTGGGCCTCCCAGGCACTATAACCCAGGGGCAGGTGGTCAGGCAAAAAGCCTTCCTGCACAAGGACTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS-3UTR CAA 90 bp AGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCTCAGCCCCAGCAGCTaGACGAAGTCCTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: RRKRFSRYQSVSSSMKCSLSPSS*TKSCMC
Trigger: GCACATGCAGGACTTCGTCAAGCTGCTGGGGCTGAG...GGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp CAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCGTCACCTGGAGATGCTaGATACATGAGGGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: QSVSSSMKCSPPKMALLPVTWRC*IHEGSE
Trigger: TTCTGACCCCTCATGTATCAAGCATCTCCAGGTGAC...GGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS GCA 90 bp ATAGAGCTGGAGTCCTTGTGCAGGAAGGCTTTTTGCCTGACCACCTaGCCCTGGGTTATAGTGCCTGGGAGGCCCACCAGGAACCCATCA +
Preference number: 5 (lower is better)
Translates to: IELESLCRKAFCLTT*PWVIVPGRPTRNPS
Trigger: TGATGGGTTCCTGGTGGGCCTCCCAGGCACTATAACCCAGGGGCAGGTGGTCAGGCAAAAAGCCTTCCTGCACAAGGACTCCAGCTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS-3UTR CAA 90 bp AAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGGTGGCATGGATCACATaGGCCTTGGTGAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KRFSRYQSVSSSMKCSPPVAWIT*ALVSFS
Trigger: GCTGAAGCTCACCAAGGCCAATGTGATCCATGCCAC...CGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp GAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCGTGGCATGGATCACATaGGCCTTGGTGAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: EAWWASMAYSVLGCCGMIVAWIT*ALVSFS
Trigger: GCTGAAGCTCACCAAGGCCAATGTGATCCATGCCAC...GATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp CAGTCAGTCTCCTCCAGCATGAAGTGCTCCCCGCCGAAGATGGCGCTCCTGCCCCAATATGCAGTGATGTaGACAGGCTTGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: QSVSSSMKCSPPKMALLPQYAVM*TGLEMV
Trigger: CACCATCTCCAAGCCTGTCAACATCACTGCATATTG...GGGCAGGAGCGCCATCTTCGGCGGGGAGCACTTCATGCTGGAGGAGACTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp GCTGATGCCATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTGCTCCATCCAGCAGCTaGACGAAGTCCTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: ADAIVPPEAEEVQQVPVSAPSSS*TKSCMC
Trigger: GCACATGCAGGACTTCGTCAAGCTGCTGGATGGAGC...ACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTATGGCATCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS CCA 90 bp TATAGTGCCTGGGAGGCCCACCAGGAACCCATCACTTCCTCTACATaGAGTGGTGGCAGAAGAGGCTGGTCATGTTCCCTGGCACCTGTT +
Preference number: 5 (lower is better)
Translates to: YSAWEAHQEPITSST*SGGRRGWSCSLAPV
Trigger: AACAGGTGCCAGGGAACATGACCAGCCTCTTCTGCCACCACTCCATGTAGAGGAAGTGATGGGTTCCTGGTGGGCCTCCCAGGCACTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS-3UTR CAA 90 bp TCTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTCACAGTGGATCACATTGGCCTaGGTGAGCTTCAGCAAACCG +
Preference number: 5 (lower is better)
Translates to: SHTPPGTGLSPLCCAGSQWITLA*VSFSKP
Trigger: CGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCA...CTGTGACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCAGCAAGGCCACATTCTaGGCAGCCACGGCCATCACC +
Preference number: 5 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSSKATF*AATAIT
Trigger: GGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCT...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGCACACATCTCTTCCTaGGGTCCTACCACAGTCATC +
Preference number: 5 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHAHISS*GPTTVI
Trigger: GATGACTGTGGTAGGACCCAAGGAAGAGATGTGTGC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS TCA 90 bp ACCTGTTCTCTGACTGTGGCGGGCCTGTCCCACCTAAAGGGAGTGTaGAGGTATGGAATCCTTCTAGGCCTGGCTTCACATCACGGCTGT +
Preference number: 5 (lower is better)
Translates to: TCSLTVAGLSHLKGV*RYGILLGLASHHGC
Trigger: ACAGCCGTGATGTGAAGCCAGGCCTAGAAGGATTCCATACCTTCACACTCCCTTTAGGTGGGACAGGCCCGCCACAGTCAGAGAACAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS TCA 90 bp CAAGTTCCTTCCCCTCTCTTGTTTCTGTTGCTCCATCCAGCAGCTTaGCGAAGTCCTGCATGTGCAGGCTCAGGGAGTGGAAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: QVPSPLLFLLLHPAA*RSPACAGSGSGRRQ
Trigger: CTGCCTCCTTCCACTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCTGCTGGATGGAGCAACAGAAACAAGAGAGGGGAAGGAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS-3UTR CAA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATGAACAAACCAGCTTATaGCCTCCTTCCACAGACCAC +
Preference number: 5 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHEQTSL*PPSTDH
Trigger: GTGGTCTGTGGAAGGAGGCAATAAGCTGGTTTGTTC...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGTGGCATGGATCACATaGGCCTTGGTGAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GEHGLFSPGLLWDDPSSVVAWIT*ALVSFS
Trigger: GCTGAAGCTCACCAAGGCCAATGTGATCCATGCCAC...CACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATTTGACAGGGCAGATGTaGTCCAGAGTGCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHLTGQM*SRVQKK
Trigger: CTTCTTCTGCACTCTGGACAACATCTGCCCTGTCAA...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp AGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCATGAAGTGCTCCAAGCTGGCAGAGATGTaGACAGGGCAGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: RRKRFSRYQSVSSSMKCSKLAEM*TGQMLS
Trigger: GGACAACATCTGCCCTGTCAACATCTCTGCCAGCTT...GGAGCACTTCATGCTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGAAGCTGGCAGAGATGTaGACAGGGCAGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRKLAEM*TGQMLS
Trigger: GGACAACATCTGCCCTGTCAACATCTCTGCCAGCTT...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGGTCCGAAAGAGGGGCTaGGGGGACTGGACTCGCCAA +
Preference number: 5 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGVRKRG*GDWTRQ
Trigger: TTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGAC...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGGTGATGTTGACAGGCTaGGAGATGGTGACTAGGGAG +
Preference number: 5 (lower is better)
Translates to: VLGCCGMIHLQWGMKVPRVMLTG*EMVTRE
Trigger: CTCCCTAGTCACCATCTCCAAGCCTGTCAACATCAC...CCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp AGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTAGTCCGAAAGAGGGGCTaGGGGGACTGGACTCGCCAA +
Preference number: 5 (lower is better)
Translates to: RKRMANSSRCQGRASLFLVRKRG*GDWTRQ
Trigger: TTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGAC...TAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGAGCAAGGCCACATTCTaGGCAGCCACGGCCATCACC +
Preference number: 5 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGSKATF*AATAIT
Trigger: GGTGATGGCCGTGGCTGCCAAGAATGTGGCCTTGCT...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp AATAGGAACGGAACAGGGTCTTTAGCTGGGTCCGAAAGAGGGGCTTGGGGGACTGTGATGTTGACAGGCTaGGAGATGGTGACTAGGGAG +
Preference number: 5 (lower is better)
Translates to: NRNGTGSLAGSERGAWGTVMLTG*EMVTRE
Trigger: CTCCCTAGTCACCATCTCCAAGCCTGTCAACATCAC...AGTCCCCCAAGCCCCTCTTTCGGACCCAGCTAAAGACCCTGTTCCGTTCCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp GGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGTGATGTTGACAGGCTaGGAGATGGTGACTAGGGAG +
Preference number: 5 (lower is better)
Translates to: GEHGLFSPGLLWDDPSSVVMLTG*EMVTRE
Trigger: CTCCCTAGTCACCATCTCCAAGCCTGTCAACATCAC...CACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGGGATGATCCATCCTCACAGTTCAGTCTaGACCTTGTGCATCAAATCT +
Preference number: 5 (lower is better)
Translates to: AWWASMAYSVLGCCGMIHPHSSV*TLCIKS
Trigger: AGATTTGATGCACAAGGTCAAGACTGAACTGTGAGG...ATGGATCATCCCACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GGGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTGTAGGTTGCCTCAATaGATTGTCCATTGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: GSERSLVGEHGLFSPGLLCRLPQ*IVHCGS
Trigger: ACTCCCACAATGGACAATCAATTGAGGCAACCTACA...CAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ATAGTGCCACCAGAGGCGGAAGAGGTTCAGCAGGTACCAGTCAGTCTCCTCCAGCAATATGCAGTGATGTaGACAGGCTTGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: IVPPEAEEVQQVPVSLLQQYAVM*TGLEMV
Trigger: CACCATCTCCAAGCCTGTCAACATCACTGCATATTG...CTGGAGGAGACTGACTGGTACCTGCTGAACCTCTTCCGCCTCTGGTGGCACTAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp CCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTCCCAGGCTCAATATGCAGTGATGTaGACAGGCTTGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: PGLLWDDPSSVGDESSQAQYAVM*TGLEMV
Trigger: CACCATCTCCAAGCCTGTCAACATCACTGCATATTG...AGCCTGGGAACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GGTCAGAAAGAAGCCTGGTGGGCGAGCATGGCTTATTCAGTCCTGGGCTGCTGTTTCTTTTCCCACTGGTaGCCAGGAAGCTTGGAGATA +
Preference number: 5 (lower is better)
Translates to: GQKEAWWASMAYSVLGCCFFSHW*PGSLEI
Trigger: TATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAA...ACAGCAGCCCAGGACTGAATAAGCCATGCTCGCCCACCAGGCTTCTTTCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp CTCATTCTCATACGCCACCTGGTACAGGGCTTTCCCCTCTGTGCTGTGCAGGGTTTCTTTTCCCACTGGTaGCCAGGAAGCTTGGAGATA +
Preference number: 5 (lower is better)
Translates to: LILIRHLVQGFPLCAVQGFFSHW*PGSLEI
Trigger: TATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAA...ACCCTGCACAGCACAGAGGGGAAAGCCCTGTACCAGGTGGCGTATGAGAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS GCA 90 bp AGACCATTACTGGACCAAATACGGCCATTCCTCATGCCAGGGGCTTaGTCTGAGCCTGCACTGAATTGTGCTGGCTCAATTCAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: RPLLDQIRPFLMPGA*SEPALNCAGSIQQG
Trigger: TCCTTGCTGAATTGAGCCAGCACAATTCAGTGCAGGCTCAGAGCAAGCCCCTGGCATGAGGAATGGCCGTATTTGGTCCAGTAATGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 90 bp GGAAATTCAGATTTTATCCCAGAATGTCCAGGGGGTGACAGCCACTaGGCTTGTTTGGAGATGGTGGCCTTGGGCACTGAGATCACTTGG +
Preference number: 5 (lower is better)
Translates to: GNSDFIPECPGGDSH*ACLEMVALGTEITW
Trigger: CCAAGTGATCTCAGTGCCCAAGGCCACCATCTCCAAACAAGCCCAGTGGCTGTCACCCCCTGGACATTCTGGGATAAAATCTGAATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS-3UTR CAA 90 bp GTCTGGGAAACCGAAGTAGGACGAGTTGAGGTAGCCGTGGACCAAGGAGACGACTCTGTGGTAAGGATGTaGGCAAAGGGGAAAAGCTTA +
Preference number: 5 (lower is better)
Translates to: VWETEVGRVEVAVDQGDDSVVRM*AKGKSL
Trigger: TAAGCTTTTCCCCTTTGCCAACATCCTTACCACAGA...GTCGTCTCCTTGGTCCACGGCTACCTCAACTCGTCCTACTTCGGTTTCCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp CTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGACAGGGCAGATGTaGTCCAGAGTGCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LPSSYSLACFFSHWLPGSLTGQM*SRVQKK
Trigger: CTTCTTCTGCACTCTGGACAACATCTGCCCTGTCAA...GCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp CCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCAAGCTGGCAGAGATGTaGACAGGGCAGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: PLVARKLGDMVTTIQAHIKLAEM*TGQMLS
Trigger: GGACAACATCTGCCCTGTCAACATCTCTGCCAGCTT...GATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCAGTCCGAAAGAGGGGCTaGGGGGACTGGACTCGCCAA +
Preference number: 5 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPVRKRG*GDWTRQ
Trigger: TTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGAC...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp TTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACGCTGTAGTTCACACTTaGTATCCTCCTGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FPLVARKLGDMVTTIQAHAVVHT*YPPALV
Trigger: CACCAGCGCAGGAGGATACAAAGTGTGAACTACAGC...GTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514349.1
CDS CCA 90 bp CTAGCTCCTTACAGCCATCCTGCACTCTGCAACTTGACAGAGCAGTaGACTCCTAAACACAGACAGAGCTGCTATGACTTGTTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: LAPYSHPALCNLTEQ*TPKHRQSCYDLFLP
Trigger: GGGAAGGAACAAGTCATAGCAGCTCTGTCTGTGTTTAGGAGTCCACTGCTCTGTCAAGTTGCAGAGTGCAGGATGGCTGTAAGGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS-3UTR CAA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTTGGATCACATTGGCCTaGGTGAGCTTCAGCAAACCG +
Preference number: 5 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVWITLA*VSFSKP
Trigger: CGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCA...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp CACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTGGCATGGATCACATaGGCCTTGGTGAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: HTSLPWVLPQSSPPICSDVAWIT*ALVSFS
Trigger: GCTGAAGCTCACCAAGGCCAATGTGATCCATGCCAC...ATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp CTCCACCCACATCTGCAGCCTCAGGAAGCTGATGCCATAGTGCCACCAGAGGCGATGTTTTCTTGTAGGTaGCCTCAATTGATTGTCCAT +
Preference number: 5 (lower is better)
Translates to: LHPHLQPQEADAIVPPEAMFSCR*PQLIVH
Trigger: ATGGACAATCAATTGAGGCAACCTACAAGAAAACAT...CGCCTCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGCAGATGTGGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS-3UTR CAA 90 bp GCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGTTCTTTTCCCACTGGTaGCCAGGAAGCTTGGAGATA +
Preference number: 5 (lower is better)
Translates to: ASLFLQPRMFLFPLVARKFFSHW*PGSLEI
Trigger: TATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAA...CTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS GCA 90 bp GATCACTTGGAAGTTATCCTAGCTCCTTACAGCCATCCTGCACTCTaGAACTTGACAGAGCAGTGGACTCCTAAACACAGACAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: DHLEVILAPYSHPAL*NLTEQWTPKHRQSC
Trigger: GCAGCTCTGTCTGTGTTTAGGAGTCCACTGCTCTGTCAAGTTGCAGAGTGCAGGATGGCTGTAAGGAGCTAGGATAACTTCCAAGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS-3UTR CAA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCGTCCGAAAGAGGGGCTaGGGGGACTGGACTCGCCAA +
Preference number: 5 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFVRKRG*GDWTRQ
Trigger: TTGGCGAGTCCAGTCCCCCAAGCCCCTCTTTCGGAC...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp GGTGCCAAGGAAGAGCTTCCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACCCTCACAGTTCAGTCTaGACCTTGTGCATCAAATCT +
Preference number: 5 (lower is better)
Translates to: GAKEELPSSYSLACFFSHPHSSV*TLCIKS
Trigger: AGATTTGATGCACAAGGTCAAGACTGAACTGTGAGG...GTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGGAAGCTCTTCCTTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp TATTCAGTCCTGGGCTGCTGTGGGATGATCCATCTTCAGTGGGGGATGAAAGTTGTCACCTGGAGATGCTaGATACATGAGGGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: YSVLGCCGMIHLQWGMKVVTWRC*IHEGSE
Trigger: TTCTGACCCCTCATGTATCAAGCATCTCCAGGTGAC...AACTTTCATCCCCCACTGAAGATGGATCATCCCACAGCAGCCCAGGACTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp CCCTCTTCCTACAGCCTCGCATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGTGTAGGTTGCCTCAATaGATTGTCCATTGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: PSSYSLACFFSHWLPGSLCRLPQ*IVHCGS
Trigger: ACTCCCACAATGGACAATCAATTGAGGCAACCTACA...CAAGCTTCCTGGCAACCAGTGGGAAAAGAAACATGCGAGGCTGTAGGAAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS CCA 90 bp AGGCTCATGTCCTGTCGCTCTATCACTCATGCAATCTCACTAGCATaGATTGGAACCATCGATGGATTTCCTGACTGGCTGGCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: RLMSCRSITHAISLA*IGTIDGFPDWLAFE
Trigger: TTCAAAGGCCAGCCAGTCAGGAAATCCATCGATGGTTCCAATCCATGCTAGTGAGATTGCATGAGTGATAGAGCGACAGGACATGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS-3UTR CAA 90 bp AGGAAGAGAATGGCTAATTCCTCTAGGTGCCAAGGAAGAGCTTCCCTCTTCCTAGTCACCTGGAGATGCTaGATACATGAGGGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: RKRMANSSRCQGRASLFLVTWRC*IHEGSE
Trigger: TTCTGACCCCTCATGTATCAAGCATCTCCAGGTGAC...TAGGAAGAGGGAAGCTCTTCCTTGGCACCTAGAGGAATTAGCCATTCTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp TTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACTGTAGGTTGCCTCAATaGATTGTCCATTGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: FPLVARKLGDMVTTIQAHCRLPQ*IVHCGS
Trigger: ACTCCCACAATGGACAATCAATTGAGGCAACCTACA...GTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTAAGCTGGCAGAGATGTaGACAGGGCAGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: MFLFPLVARKLGDMVTTIKLAEM*TGQMLS
Trigger: GGACAACATCTGCCCTGTCAACATCTCTGCCAGCTT...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp TCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTCTACCAGTGATGTTGACAGGCTaGGAGATGGTGACTAGGGAG +
Preference number: 5 (lower is better)
Translates to: SFFCWDEHLGVRYDCSLPVMLTG*EMVTRE
Trigger: CTCCCTAGTCACCATCTCCAAGCCTGTCAACATCAC...TGGTAGAGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS TCA 90 bp AGGCAGCAAATTGAAAGGGAAAGAAACTGGCCTAGGAGTCAAACCTaGGTTCTAATCCCGGCTCTGCAACTAACTCACTGTGTAACCTCA +
Preference number: 5 (lower is better)
Translates to: RQQIERERNWPRSQT*VLIPALQLTHCVTS
Trigger: TGAGGTTACACAGTGAGTTAGTTGCAGAGCCGGGATTAGAACTCAGGTTTGACTCCTAGGCCAGTTTCTTTCCCTTTCAATTTGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503240.5
CDS GCA 90 bp CAGAACATGAGAGTGAGAGGCTGTAGTTCACACTTTGTATCCTCCTaGGCTGGTGGTTCCCAGGTGCTTAAATTTCCTAGGCTTATAACA +
Preference number: 5 (lower is better)
Translates to: QNMRVRGCSSHFVSS*AGGSQVLKFPRLIT
Trigger: TGTTATAAGCCTAGGAAATTTAAGCACCTGGGAACCACCAGCGCAGGAGGATACAAAGTGTGAACTACAGCCTCTCACTCTCATGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000514349.1
CDS CCA 90 bp CTCAGGTCCCCTCCAAGACTTGGGGCCCTCTTGATGCAAATGGACTaGTCCATTAAAGGAAACACAAATGCTATGGTTTGTTCATTTGTG +
Preference number: 5 (lower is better)
Translates to: LRSPPRLGALLMQMD*SIKGNTNAMVCSFV
Trigger: CACAAATGAACAAACCATAGCATTTGTGTTTCCTTTAATGGACCAGTCCATTTGCATCAAGAGGGCCCCAAGTCTTGGAGGGGACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS-3UTR CAA 90 bp ATGTTTCTTTTCCCACTGGTTGCCAGGAAGCTTGGAGATATGGTGACGACTATTTTGACAGGGCAGATGTaGTCCAGAGTGCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: MFLFPLVARKLGDMVTTILTGQM*SRVQKK
Trigger: CTTCTTCTGCACTCTGGACAACATCTGCCCTGTCAA...AATAGTCGTCACCATATCTCCAAGCTTCCTGGCAACCAGTGGGAAAAGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ACACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGCCTCACAGTTCAGTCTaGACCTTGTGCATCAAATCT +
Preference number: 5 (lower is better)
Translates to: THLFLGSYHSHLLQYAVMPHSSV*TLCIKS
Trigger: AGATTTGATGCACAAGGTCAAGACTGAACTGTGAGG...CATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp CCTTCTTCTTTCTTCTGCTGGGATGAACATCTAGGGGTAAGATATGACTGCTCTGTCACCTGGAGATGCTaGATACATGAGGGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: PSSFFCWDEHLGVRYDCSVTWRC*IHEGSE
Trigger: TTCTGACCCCTCATGTATCAAGCATCTCCAGGTGAC...AGAGCAGTCATATCTTACCCCTAGATGTTCATCCCAGCAGAAGAAAGAAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ACTAGGTACTTCAAATCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTGGATCACATTGGCCTaGGTGAGCTTCAGCAAACCG +
Preference number: 5 (lower is better)
Translates to: TRYFKSIKSTVTRSYDHFWITLA*VSFSKP
Trigger: CGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCA...GAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGATTTGAAGTACCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAATGGATCACATTGGCCTaGGTGAGCTTCAGCAAACCG +
Preference number: 5 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKWITLA*VSFSKP
Trigger: CGGTTTGCTGAAGCTCACCAAGGCCAATGTGATCCA...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTTCTGTGGTAAGGATGTaGGCAAAGGGGAAAAGCTTA +
Preference number: 5 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVSVVRM*AKGKSL
Trigger: TAAGCTTTTCCCCTTTGCCAACATCCTTACCACAGA...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTCCTCACAGTTCAGTCTaGACCTTGTGCATCAAATCT +
Preference number: 5 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVPHSSV*TLCIKS
Trigger: AGATTTGATGCACAAGGTCAAGACTGAACTGTGAGG...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp AAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTGCACACATCTCTTCCTaGGGTCCTACCACAGTCATC +
Preference number: 5 (lower is better)
Translates to: KSTVTRSYDHFLGFLIFPAHISS*GPTTVI
Trigger: GATGACTGTGGTAGGACCCAAGGAAGAGATGTGTGC...AGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAAGCACACATCTCTTCCTaGGGTCCTACCACAGTCATC +
Preference number: 5 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKAHISS*GPTTVI
Trigger: GATGACTGTGGTAGGACCCAAGGAAGAGATGTGTGC...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS GCA 90 bp ATCTGTAAGACCACCTGTAGCATCACTTCTGAGAAGCAGAGTTTCTaGATCAAACAGAACGTGTATTGGACAGATGCTGCTGGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: ICKTTCSITSEKQSF*IKQNVYWTDAAGFE
Trigger: TTCAAACCCAGCAGCATCTGTCCAATACACGTTCTGTTTGATGCAGAAACTCTGCTTCTCAGAAGTGATGCTACAGGTGGTCTTACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS GCA 90 bp ACACACACTGCTCTCCACTTTAACAATACACTGTATCTTGGAGATTaGCCTGTATCTGGGCATAAAGACTTCCCCATTCTGACTGCTGAA +
Preference number: 5 (lower is better)
Translates to: THTALHFNNTLYLGD*PVSGHKDFPILTAE
Trigger: TTCAGCAGTCAGAATGGGGAAGTCTTTATGCCCAGATACAGGGCAATCTCCAAGATACAGTGTATTGTTAAAGTGGAGAGCAGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS GCA 90 bp ATGAGGACAACAAAGTTTGCAAATGAGTGGTCCACAGGCTGCATCTaGCCTGCAGAAGTGTTTCATTTGGCTTACAAGATGAATTGGTTG +
Preference number: 5 (lower is better)
Translates to: MRTTKFANEWSTGCI*PAEVFHLAYKMNWL
Trigger: CAACCAATTCATCTTGTAAGCCAAATGAAACACTTCTGCAGGGCAGATGCAGCCTGTGGACCACTCATTTGCAAACTTTGTTGTCCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS-3UTR CAA 90 bp CAGGAAGCTTGGAGATATGGTGACGACTATTCAGGCACACATCTCTTCCTTGGGATGTTTTCTTGTAGGTaGCCTCAATTGATTGTCCAT +
Preference number: 5 (lower is better)
Translates to: QEAWRYGDDYSGTHLFLGMFSCR*PQLIVH
Trigger: ATGGACAATCAATTGAGGCAACCTACAAGAAAACAT...CCCAAGGAAGAGATGTGTGCCTGAATAGTCGTCACCATATCTCCAAGCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS TCA 90 bp AAACTGAAAAGATTTCACACACGACTCTGGATTTCCAGCTTCTTCTaGAAAGTGAGTAGATCTAGCCACATGAGGTGGGCATTGTACACG +
Preference number: 5 (lower is better)
Translates to: KLKRFHTRLWISSFF*KVSRSSHMRWALYT
Trigger: CGTGTACAATGCCCACCTCATGTGGCTAGATCTACTCACTTTTCAGAAGAAGCTGGAAATCCAGAGTCGTGTGTGAAATCTTTTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 90 bp GAATTGTTAAAAGTTACTGACCAGTTCTGTTCAGTGATCAGTGTTTaGAAACCAGGCCTTAATCCAGGGATTGGCAAACTACAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: ELLKVTDQFCSVISV*KPGLNPGIGKLQPA
Trigger: TGCAGGCTGTAGTTTGCCAATCCCTGGATTAAGGCCTGGTTTCCAAACACTGATCACTGAACAGAACTGGTCAGTAACTTTTAACAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503240.5
CDS-3UTR CAA 90 bp TCCATCAAGTCCACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCCAATATGCAGTGATGTaGACAGGCTTGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SIKSTVTRSYDHFLGFLIQYAVM*TGLEMV
Trigger: CACCATCTCCAAGCCTGTCAACATCACTGCATATTG...GATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGTGGACTTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ACATCTCTTCCTTGGGTCCTACCACAGTCATCTCCTCCAATATGCAGTGATGTTATGTTTTCTTGTAGGTaGCCTCAATTGATTGTCCAT +
Preference number: 5 (lower is better)
Translates to: TSLPWVLPQSSPPICSDVMFSCR*PQLIVH
Trigger: ATGGACAATCAATTGAGGCAACCTACAAGAAAACAT...AACATCACTGCATATTGGAGGAGATGACTGTGGTAGGACCCAAGGAAGAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp ACAGTAACCAGGAGCTATGATCATTTCTTAGGTTTTCTGATCTTCCCTTCTACTTCTGTGGTAAGGATGTaGGCAAAGGGGAAAAGCTTA +
Preference number: 5 (lower is better)
Translates to: TVTRSYDHFLGFLIFPSTSVVRM*AKGKSL
Trigger: TAAGCTTTTCCCCTTTGCCAACATCCTTACCACAGA...AGTAGAAGGGAAGATCAGAAAACCTAAGAAATGATCATAGCTCCTGGTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS-3UTR CAA 90 bp AACAGTAATAAAATAAGACTCATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTCTGTGGTAAGGATGTaGGCAAAGGGGAAAAGCTTA +
Preference number: 5 (lower is better)
Translates to: NSNKIRLIVLCLIFPPVVSVVRM*AKGKSL
Trigger: TAAGCTTTTCCCCTTTGCCAACATCCTTACCACAGA...GACTACGGGAGGGAATATAAGGCAGAGAACTATGAGTCTTATTTTATTACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS TCA 90 bp ATCTTGGAGATTGCCCTGTATCTGGGCATAAAGACTTCCCCATTCTaGCTGCTGAACAGCCTATTGTGTAGTTATACAATAATTTGTTTA +
Preference number: 5 (lower is better)
Translates to: ILEIALYLGIKTSPF*LLNSLLCSYTIICL
Trigger: TAAACAAATTATTGTATAACTACACAATAGGCTGTTCAGCAGTCAGAATGGGGAAGTCTTTATGCCCAGATACAGGGCAATCTCCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS GCA 90 bp ATTACAAACAATGCTGTAGTGAATAACTTGGTATCTATGCTACTTTaGACATCTGTAAGACCACCTGTAGCATCACTTCTGAGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: ITNNAVVNNLVSMLL*TSVRPPVASLLRSR
Trigger: TCTGCTTCTCAGAAGTGATGCTACAGGTGGTCTTACAGATGTGCAAAGTAGCATAGATACCAAGTTATTCACTACAGCATTGTTTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS-3UTR CAA 90 bp ATAGTTCTCTGCCTTATATTCCCTCCCGTAGTCTTCTGGTTTCTAGCTAAGAAAATGTTTTCTTGTAGGTaGCCTCAATTGATTGTCCAT +
Preference number: 5 (lower is better)
Translates to: IVLCLIFPPVVFWFLAKKMFSCR*PQLIVH
Trigger: ATGGACAATCAATTGAGGCAACCTACAAGAAAACAT...TTTCTTAGCTAGAAACCAGAAGACTACGGGAGGGAATATAAGGCAGAGAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000274569.9
ENST00000505669.5
ENST00000511945.5
ENST00000514349.1
CDS TCA 90 bp TTTCATTTGGCTTACAAGATGAATTGGTTGCAAATGTTGAAAAACTaGAAAGATTTCACACACGACTCTGGATTTCCAGCTTCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: FHLAYKMNWLQMLKN*KDFTHDSGFPASSE
Trigger: TTCAGAAGAAGCTGGAAATCCAGAGTCGTGTGTGAAATCTTTTCAGTTTTTCAACATTTGCAACCAATTCATCTTGTAAGCCAAATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CAA 72 bp CAGCCCCAACCACCGCGCGTCCTTCCCGCACCGATTTaGCCCGGCGGGGCATCTCCGCCAGCAGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: QPQPPRVLPAPI*PGGASPPAAAA
Trigger: CGCCGCCGCTGCTGGCGGAGATGCCCCGCCGGGCAAAATCGGTGCGGGAAGGACGCGCGGTGGTTGGGGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505669.5
ENST00000511945.5
CDS GCA 72 bp GGCCTTGATGGTCTGGGAAGTCTGAGAAGGGCCCAGTaGTGTCACCAGCCCCAGGGCGCTGGGCACTGGAGC +
Preference number: 6 (lower is better)
Translates to: GLDGLGSLRRAQ*CHQPQGAGHWS
Trigger: GCTCCAGTGCCCAGCGCCCTGGGGCTGGTGACAGCACTGGGCCCTTCTCAGACTTCCCAGACCATCAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503240.5
CDS GCA 72 bp ACGGCTGGCTGCAGATGGCTGCGGTGGAGGGCTGGCTaGCTCCTTCAGAGGGGGCCTTGTTCTGCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: TAGCRWLRWRAG*LLQRGPCSALF
Trigger: GAAGAGAGCAGAACAAGGCCCCCTCTGAAGGAGGCAGCCAGCCCTCCACCGCAGCCATCTGCAGCCAGCCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 72 bp TGGGCATTGTACACGGCTGGCTGCAGATGGCTGCGGTaGAGGGCTGGCTGCCTCCTTCAGAGGGGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: WALYTAGCRWLR*RAGCLLQRGPC
Trigger: ACAAGGCCCCCTCTGAAGGAGGCAGCCAGCCCTCCACCGCAGCCATCTGCAGCCAGCCGTGTACAATGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CAA 90 bp CAGATGGCTGCGGTGGAGGGCTGGCTGCCTCCTTCAGAGGGGGCCTaGTTCTGCTCTCTTCCACCTGCTGATTCACTGACTCGCATCCCA +
Preference number: 6 (lower is better)
Translates to: QMAAVEGWLPPSEGA*FCSLPPADSLTRIP
Trigger: TGGGATGCGAGTCAGTGAATCAGCAGGTGGAAGAGAGCAGAACAAGGCCCCCTCTGAAGGAGGCAGCCAGCCCTCCACCGCAGCCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS GCA 72 bp GAGTCCTTGTGCAGGAAGGCTTTTTGCCTGACCACCTaGCCCTGGGTTATAGTGCCTGGGAGGCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: ESLCRKAFCLTT*PWVIVPGRPTR
Trigger: CCTGGTGGGCCTCCCAGGCACTATAACCCAGGGGCAGGTGGTCAGGCAAAAAGCCTTCCTGCACAAGGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CAA 72 bp GCGGTGGAGGGCTGGCTGCCTCCTTCAGAGGGGGCCTaGTTCTGCTCTCTTCCACCTGCTGATTCACTGACT +
Preference number: 6 (lower is better)
Translates to: AVEGWLPPSEGA*FCSLPPADSLT
Trigger: AGTCAGTGAATCAGCAGGTGGAAGAGAGCAGAACAAGGCCCCCTCTGAAGGAGGCAGCCAGCCCTCCACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS TCA 72 bp TTTCTTCACCCAGCTGGGGCTACGGCCCACCCCTGCTaGCACATCTCCTTCTCCAACAGTGTCGGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: FLHPAGATAHPC*HISFSNSVGSA
Trigger: GGCAGAACCGACACTGTTGGAGAAGGAGATGTGTCAGCAGGGGTGGGCCGTAGCCCCAGCTGGGTGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS GCA 72 bp GAGGGCTGGCTGCCTCCTTCAGAGGGGGCCTTGTTCTaGTCTCTTCCACCTGCTGATTCACTGACTCGCATC +
Preference number: 6 (lower is better)
Translates to: EGWLPPSEGALF*SLPPADSLTRI
Trigger: GATGCGAGTCAGTGAATCAGCAGGTGGAAGAGAGCAGAACAAGGCCCCCTCTGAAGGAGGCAGCCAGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 72 bp GGCCCACCAGGAACCCATCACTTCCTCTACATGGAGTaGTGGCAGAAGAGGCTGGTCATGTTCCCTGGCACC +
Preference number: 6 (lower is better)
Translates to: GPPGTHHFLYME*WQKRLVMFPGT
Trigger: GGTGCCAGGGAACATGACCAGCCTCTTCTGCCACCACTCCATGTAGAGGAAGTGATGGGTTCCTGGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 72 bp TTGTGCAGGAAGGCTTTTTGCCTGACCACCTGCCCCTaGGTTATAGTGCCTGGGAGGCCCACCAGGAACCCA +
Preference number: 6 (lower is better)
Translates to: LCRKAFCLTTCP*VIVPGRPTRNP
Trigger: TGGGTTCCTGGTGGGCCTCCCAGGCACTATAACCCAGGGGCAGGTGGTCAGGCAAAAAGCCTTCCTGCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS GCA 72 bp TCGTACACGTCGATCTGCACCCGAGGTCCAAAGTGCTaGTGGAGAAAATGGGCCACAGCAGAGCCCCCAATC +
Preference number: 6 (lower is better)
Translates to: SYTSICTRGPKC*WRKWATAEPPI
Trigger: GATTGGGGGCTCTGCTGTGGCCCATTTTCTCCAGCAGCACTTTGGACCTCGGGTGCAGATCGACGTGTACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000274569.9
ENST00000503240.5
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
ENST00000514349.1
CDS CCA 72 bp TACACGTCGATCTGCACCCGAGGTCCAAAGTGCTGCTaGAGAAAATGGGCCACAGCAGAGCCCCCAATCCCA +
Preference number: 6 (lower is better)
Translates to: YTSICTRGPKCC*RKWATAEPPIP
Trigger: TGGGATTGGGGGCTCTGCTGTGGCCCATTTTCTCCAGCAGCACTTTGGACCTCGGGTGCAGATCGACGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000274569.9
ENST00000503240.5
ENST00000505669.5
ENST00000510990.6
ENST00000511945.5
ENST00000514349.1
CDS CCA 72 bp GGCGGGCCTGTCCCACCTAAAGGGAGTGTGAAGGTATaGAATCCTTCTAGGCCTGGCTTCACATCACGGCTG +
Preference number: 6 (lower is better)
Translates to: GGPVPPKGSVKV*NPSRPGFTSRL
Trigger: CAGCCGTGATGTGAAGCCAGGCCTAGAAGGATTCCATACCTTCACACTCCCTTTAGGTGGGACAGGCCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 72 bp TGGGAGGCCCACCAGGAACCCATCACTTCCTCTACATaGAGTGGTGGCAGAAGAGGCTGGTCATGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: WEAHQEPITSST*SGGRRGWSCSL
Trigger: CAGGGAACATGACCAGCCTCTTCTGCCACCACTCCATGTAGAGGAAGTGATGGGTTCCTGGTGGGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CAA 90 bp GCAAGTTCCTTCCCCTCTCTTGTTTCTGTTGCTCCATCCAGCAGCTaGACGAAGTCCTGCATGTGCAGGCTCAGGGAGTGGAAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: ASSFPSLVSVAPSSS*TKSCMCRLREWKEA
Trigger: TGCCTCCTTCCACTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCTGCTGGATGGAGCAACAGAAACAAGAGAGGGGAAGGAACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS TCA 72 bp CTGACTGTGGCGGGCCTGTCCCACCTAAAGGGAGTGTaGAGGTATGGAATCCTTCTAGGCCTGGCTTCACAT +
Preference number: 6 (lower is better)
Translates to: LTVAGLSHLKGV*RYGILLGLASH
Trigger: ATGTGAAGCCAGGCCTAGAAGGATTCCATACCTTCACACTCCCTTTAGGTGGGACAGGCCCGCCACAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS TCA 72 bp TCCCCTCTCTTGTTTCTGTTGCTCCATCCAGCAGCTTaGCGAAGTCCTGCATGTGCAGGCTCAGGGAGTGGA +
Preference number: 6 (lower is better)
Translates to: SPLLFLLLHPAA*RSPACAGSGSG
Trigger: TCCACTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCTGCTGGATGGAGCAACAGAAACAAGAGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS CAA 72 bp ACACATAGAGCTGGAGTCCTTGTGCAGGAAGGCTTTTaGCCTGACCACCTGCCCCTGGGTTATAGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: THRAGVLVQEGF*PDHLPLGYSAW
Trigger: CCAGGCACTATAACCCAGGGGCAGGTGGTCAGGCAAAAAGCCTTCCTGCACAAGGACTCCAGCTCTATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CAA 72 bp TTCCCCTCTCTTGTTTCTGTTGCTCCATCCAGCAGCTaGACGAAGTCCTGCATGTGCAGGCTCAGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: FPSLVSVAPSSS*TKSCMCRLREW
Trigger: CCACTCCCTGAGCCTGCACATGCAGGACTTCGTCAAGCTGCTGGATGGAGCAACAGAAACAAGAGAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510990.6
CDS TCA 72 bp TGTAAAATGAGATTGGGCCACATGACCTTCTGGCCTTaGTGGTCTGGGAAGTCTGAGAAGGGCCCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: CKMRLGHMTFWP*WSGKSEKGPVL
Trigger: CAGCACTGGGCCCTTCTCAGACTTCCCAGACCATCAAGGCCAGAAGGTCATGTGGCCCAATCTCATTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503240.5
CDS GCA 72 bp CACCCCCAGGCTCATGTCCTGTCGCTCTATCACTCATaGAATCTCACTAGCATGGATTGGAACCATCGATGG +
Preference number: 6 (lower is better)
Translates to: HPQAHVLSLYHS*NLTSMDWNHRW
Trigger: CCATCGATGGTTCCAATCCATGCTAGTGAGATTGCATGAGTGATAGAGCGACAGGACATGAGCCTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CAA 90 bp GGCCTGGTACTTATAGATCCTAGAAGACACATAGAGCTGGAGTCCTaGTGCAGGAAGGCTTTTTGCCTGACCACCTGCCCCTGGGTTATA +
Preference number: 6 (lower is better)
Translates to: GLVLIDPRRHIELES*CRKAFCLTTCPWVI
Trigger: TATAACCCAGGGGCAGGTGGTCAGGCAAAAAGCCTTCCTGCACAAGGACTCCAGCTCTATGTGTCTTCTAGGATCTATAAGTACCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CAA 72 bp ATCCTAGCTCCTTACAGCCATCCTGCACTCTGCAACTaGACAGAGCAGTGGACTCCTAAACACAGACAGAGC +
Preference number: 6 (lower is better)
Translates to: ILAPYSHPALCN*TEQWTPKHRQS
Trigger: GCTCTGTCTGTGTTTAGGAGTCCACTGCTCTGTCAAGTTGCAGAGTGCAGGATGGCTGTAAGGAGCTAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS CAA 72 bp CTTATAGATCCTAGAAGACACATAGAGCTGGAGTCCTaGTGCAGGAAGGCTTTTTGCCTGACCACCTGCCCC +
Preference number: 6 (lower is better)
Translates to: LIDPRRHIELES*CRKAFCLTTCP
Trigger: GGGGCAGGTGGTCAGGCAAAAAGCCTTCCTGCACAAGGACTCCAGCTCTATGTGTCTTCTAGGATCTATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS GCA 72 bp AGAGTGAGAGGCTGTAGTTCACACTTTGTATCCTCCTaGGCTGGTGGTTCCCAGGTGCTTAAATTTCCTAGG +
Preference number: 6 (lower is better)
Translates to: RVRGCSSHFVSS*AGGSQVLKFPR
Trigger: CCTAGGAAATTTAAGCACCTGGGAACCACCAGCGCAGGAGGATACAAAGTGTGAACTACAGCCTCTCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000514349.1
CDS CAA 90 bp TTGGAAGTTATCCTAGCTCCTTACAGCCATCCTGCACTCTGCAACTaGACAGAGCAGTGGACTCCTAAACACAGACAGAGCTGCTATGAC +
Preference number: 6 (lower is better)
Translates to: LEVILAPYSHPALCN*TEQWTPKHRQSCYD
Trigger: GTCATAGCAGCTCTGTCTGTGTTTAGGAGTCCACTGCTCTGTCAAGTTGCAGAGTGCAGGATGGCTGTAAGGAGCTAGGATAACTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS GCA 72 bp GAAGTTATCCTAGCTCCTTACAGCCATCCTGCACTCTaGAACTTGACAGAGCAGTGGACTCCTAAACACAGA +
Preference number: 6 (lower is better)
Translates to: EVILAPYSHPAL*NLTEQWTPKHR
Trigger: TCTGTGTTTAGGAGTCCACTGCTCTGTCAAGTTGCAGAGTGCAGGATGGCTGTAAGGAGCTAGGATAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS CCA 72 bp CTAGCATGGATTGGAACCATCGATGGATTTCCTGACTaGCTGGCCTTTGAAATGTTGCCCATTCTAGGGCTT +
Preference number: 6 (lower is better)
Translates to: LAWIGTIDGFPD*LAFEMLPILGL
Trigger: AAGCCCTAGAATGGGCAACATTTCAAAGGCCAGCCAGTCAGGAAATCCATCGATGGTTCCAATCCATGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 72 bp TCCTGTCGCTCTATCACTCATGCAATCTCACTAGCATaGATTGGAACCATCGATGGATTTCCTGACTGGCTG +
Preference number: 6 (lower is better)
Translates to: SCRSITHAISLA*IGTIDGFPDWL
Trigger: CAGCCAGTCAGGAAATCCATCGATGGTTCCAATCCATGCTAGTGAGATTGCATGAGTGATAGAGCGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS TCA 72 bp ATTGAAAGGGAAAGAAACTGGCCTAGGAGTCAAACCTaGGTTCTAATCCCGGCTCTGCAACTAACTCACTGT +
Preference number: 6 (lower is better)
Translates to: IERERNWPRSQT*VLIPALQLTHC
Trigger: ACAGTGAGTTAGTTGCAGAGCCGGGATTAGAACTCAGGTTTGACTCCTAGGCCAGTTTCTTTCCCTTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503240.5
CDS TCA 72 bp AGATTTCACACACGACTCTGGATTTCCAGCTTCTTCTaGAAAGTGAGTAGATCTAGCCACATGAGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: RFHTRLWISSFF*KVSRSSHMRWA
Trigger: TGCCCACCTCATGTGGCTAGATCTACTCACTTTTCAGAAGAAGCTGGAAATCCAGAGTCGTGTGTGAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS TCA 72 bp TCTAGATGGAAAAATGAGGACAACAAAGTTTGCAAATaGGTGGTCCACAGGCTGCATCTGCCCTGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: SRWKNEDNKVCK*VVHRLHLPCRS
Trigger: ACTTCTGCAGGGCAGATGCAGCCTGTGGACCACTCATTTGCAAACTTTGTTGTCCTCATTTTTCCATCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CAA 72 bp TCAAACAGAACGTGTATTGGACAGATGCTGCTGGGTTaGAATCCCACCTCTCGCTGTAATGGCTTTAGCTTA +
Preference number: 6 (lower is better)
Translates to: SNRTCIGQMLLG*NPTSRCNGFSL
Trigger: TAAGCTAAAGCCATTACAGCGAGAGGTGGGATTCAAACCCAGCAGCATCTGTCCAATACACGTTCTGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS GCA 72 bp GCTCTCCACTTTAACAATACACTGTATCTTGGAGATTaGCCTGTATCTGGGCATAAAGACTTCCCCATTCTG +
Preference number: 6 (lower is better)
Translates to: ALHFNNTLYLGD*PVSGHKDFPIL
Trigger: CAGAATGGGGAAGTCTTTATGCCCAGATACAGGGCAATCTCCAAGATACAGTGTATTGTTAAAGTGGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS CAA 72 bp CACACACTGCTCTCCACTTTAACAATACACTGTATCTaGGAGATTGCCCTGTATCTGGGCATAAAGACTTCC +
Preference number: 6 (lower is better)
Translates to: HTLLSTLTIHCI*EIALYLGIKTS
Trigger: GGAAGTCTTTATGCCCAGATACAGGGCAATCTCCAAGATACAGTGTATTGTTAAAGTGGAGAGCAGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS CAA 72 bp GCCCATTCTAGGGCTTCTTTTGTAAACATGTTGAGTTaGGTTATCAATAGGACACGAGATGGAGGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: AHSRASFVNMLS*VINRTRDGGVQ
Trigger: CTGGACACCTCCATCTCGTGTCCTATTGATAACCAAACTCAACATGTTTACAAAAGAAGCCCTAGAATGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CCA 72 bp AAAGTTACTGACCAGTTCTGTTCAGTGATCAGTGTTTaGAAACCAGGCCTTAATCCAGGGATTGGCAAACTA +
Preference number: 6 (lower is better)
Translates to: KVTDQFCSVISV*KPGLNPGIGKL
Trigger: TAGTTTGCCAATCCCTGGATTAAGGCCTGGTTTCCAAACACTGATCACTGAACAGAACTGGTCAGTAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503240.5
CDS CAA 72 bp ACAGCCTGCAGGCCAAATCCAGAAAGATGCCTGTTTTaGCAAACTAGAGTTTTATTGAAACACAGCCATGAT +
Preference number: 6 (lower is better)
Translates to: TACRPNPERCLF*QTRVLLKHSHD
Trigger: ATCATGGCTGTGTTTCAATAAAACTCTAGTTTGCAAAAACAGGCATCTTTCTGGATTTGGCCTGCAGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503240.5
CDS CAA 72 bp AATGTTGCCCATTCTAGGGCTTCTTTTGTAAACATGTaGAGTTTGGTTATCAATAGGACACGAGATGGAGGT +
Preference number: 6 (lower is better)
Translates to: NVAHSRASFVNM*SLVINRTRDGG
Trigger: ACCTCCATCTCGTGTCCTATTGATAACCAAACTCAACATGTTTACAAAAGAAGCCCTAGAATGGGCAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS CAA 90 bp TTTCCTAGGCTTATAACATTTCCAAAAGGAAATCTGCGGACTGAGTaGTCAGTAGAGCTATTAATAAGCAAAGGCAAACCTGAAAACTGC +
Preference number: 6 (lower is better)
Translates to: FPRLITFPKGNLRTE*SVELLISKGKPENC
Trigger: GCAGTTTTCAGGTTTGCCTTTGCTTATTAATAGCTCTACTGACAACTCAGTCCGCAGATTTCCTTTTGGAAATGTTATAAGCCTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000514349.1
CDS TCA 72 bp CGCTGTAATGGCTTTAGCTTAAATCTATACATTTTCTaGGCCTCAGTTGCCTTAAGAGGAGATATAACACTC +
Preference number: 6 (lower is better)
Translates to: RCNGFSLNLYIF*ASVALRGDITL
Trigger: GAGTGTTATATCTCCTCTTAAGGCAACTGAGGCTCAGAAAATGTATAGATTTAAGCTAAAGCCATTACAGCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1
CDS CAA 72 bp CTTATAACATTTCCAAAAGGAAATCTGCGGACTGAGTaGTCAGTAGAGCTATTAATAAGCAAAGGCAAACCT +
Preference number: 6 (lower is better)
Translates to: LITFPKGNLRTE*SVELLISKGKP
Trigger: AGGTTTGCCTTTGCTTATTAATAGCTCTACTGACAACTCAGTCCGCAGATTTCCTTTTGGAAATGTTATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000514349.1
CDS TCA 72 bp GTTGTCAGTAGAGCTATTAATAAGCAAAGGCAAACCTaGAAACTGCTGCCTACTATACTTTCGTTTCATAAA +
Preference number: 6 (lower is better)
Translates to: VVSRAINKQRQT*KLLPTILSFHK
Trigger: TTTATGAAACGAAAGTATAGTAGGCAGCAGTTTTCAGGTTTGCCTTTGCTTATTAATAGCTCTACTGACAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000514349.1
CDS TCA 72 bp AATATCAGAAAGAGAGGTAAGGAAATAAGCTTTGGGTaGCATCTGGAGAATATAAGGAAGAAGTGCTATAAA +
Preference number: 6 (lower is better)
Translates to: NIRKRGKEISFG*HLENIRKKCYK
Trigger: TTTATAGCACTTCTTCCTTATATTCTCCAGATGTCACCCAAAGCTTATTTCCTTACCTCTCTTTCTGATATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507621.1
CDS GCA 72 bp TTAAAGGAAACACAAATGCTATGGTTTGTTCATTTGTaGTGCTTGTTAATAAACAGTAAACAGATGCACTGG +
Preference number: 6 (lower is better)
Translates to: LKETQMLWFVHL*CLLINSKQMHW
Trigger: CCAGTGCATCTGTTTACTGTTTATTAACAAGCAGCACAAATGAACAAACCATAGCATTTGTGTTTCCTTTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503240.5
ENST00000507621.1