RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCTP (Homo sapiens)

Ensembl gene IDs: ENSG00000141179

Ensembl transcript IDs: ENST00000268896.10, ENST00000325214.10, ENST00000417982.6, ENST00000571489.5, ENST00000572536.1, ENST00000573500.5, ENST00000576183.5, ENST00000576221.1

Found 534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACCCGGATCACCCCAGACCTCTCGCCAAGCTGAGGCATGGAGGTaGTCCGGGCCAGGATCACATGGATCTTCCTCCCTTCCATGTCCA +
Preference number: 1 (lower is better)
Translates to: SPGSPQTSRQAEAWR*SGPGSHGSSSLPCP
Trigger: TGGACATGGAAGGGAGGAAGATCCATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTCTGGGGTGATCCGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR TCA 90 bp TGCTTGTATTGCTTCACCCGGATCACCCCAGACCTCTCGCCAAGCTaGGGCATGGAGGTGCTCCGGGCCAGGATCACATGGATCTTCCTC +
Preference number: 1 (lower is better)
Translates to: CLYCFTRITPDLSPS*GMEVLRARITWIFL
Trigger: GAGGAAGATCCATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR CCA 90 bp GTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAGCAGACGAGTGAGCTGGATGTCAGG +
Preference number: 1 (lower is better)
Translates to: VCPILNCRRRQPSPG*GERERKQTSELDVR
Trigger: CCTGACATCCAGCTCACTCGTCTGCTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR TCA 90 bp GTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACT +
Preference number: 1 (lower is better)
Translates to: VVVCRPLKTETAGEG*TVVGALPETLPGGT
Trigger: AGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGTTTCTGTCTTCAGAGGCCTACACACTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR TCA 90 bp GGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGCTCTaGACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAA +
Preference number: 1 (lower is better)
Translates to: GHWHVIQFGCTESQL*TKCHFQQPLPSWKK
Trigger: TTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR CCA 90 bp GAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATTaGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTT +
Preference number: 1 (lower is better)
Translates to: ETLPGGTSRWHFQRH*VVALPETSTHGCNV
Trigger: AACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR GCA 90 bp AAGACTTCCCCTCCTAATAGTAAGCAAGCAAAGGTTTCCCTAGTCTaGCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCCCAGGATGG +
Preference number: 1 (lower is better)
Translates to: KTSPPNSKQAKVSLV*PILNCRRRQPSPGW
Trigger: CCATCCTGGGCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGCTTGCTTACTATTAGGAGGGGAAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR GCA 90 bp CAGTTCTCTTTCTTAGGTTTTCTTGAGGTAGTTCTGACAGGCTCTTaGCATGTCTTTCAAGAAGTTAGGAACTCCATTCTTGGCGGCCCA +
Preference number: 1 (lower is better)
Translates to: QFSFLGFLEVVLTGS*HVFQEVRNSILGGP
Trigger: TGGGCCGCCAAGAATGGAGTTCCTAACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACTACCTCAAGAAAACCTAAGAAAGAGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR CCA 90 bp CTTCCAGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATaGATGCAATGTTCCCAGTTCTCTTTCTTAGGTTTTCTTGAGGTA +
Preference number: 1 (lower is better)
Translates to: LPETLGGCTSRDINP*MQCSQFSFLGFLEV
Trigger: TACCTCAAGAAAACCTAAGAAAGAGAACTGGGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417982.6
ENST00000576183.5
3UTR TCA 90 bp AGGCCTCTGATACTTCTCCAAATGGTCTGGCATCATAACAGCTACTaGTCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATCA +
Preference number: 1 (lower is better)
Translates to: RPLILLQMVWHHNSY*SSTSRNEERLTGLS
Trigger: TGATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTATGATGCCAGACCATTTGGAGAAGTATCAGAGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR TCA 90 bp ATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTaGTACTTCTCCAAATGGTCTGGCATCATAACAGCTACTGATCCT +
Preference number: 1 (lower is better)
Translates to: MRKNVVVILCVRSGL*YFSKWSGIITATDP
Trigger: AGGATCAGTAGCTGTTATGATGCCAGACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR CCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATaGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAA +
Preference number: 1 (lower is better)
Translates to: MQSLRGTGSLSPSDI*KREIIHFLMDDEEK
Trigger: TTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR TCA 90 bp AAGGAAATGAGACTGTCATTTCTATGTCTTCACAGTGGTCACTCTTaGTTCTTTGGGATGTGGCAGAAGGTAAACAATGTTGGCTTTAGG +
Preference number: 1 (lower is better)
Translates to: KEMRLSFLCLHSGHS*FFGMWQKVNNVGFR
Trigger: CCTAAAGCCAACATTGTTTACCTTCTGCCACATCCCAAAGAATCAAGAGTGACCACTGTGAAGACATAGAAATGACAGTCTCATTTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR GCA 90 bp CAGTTCTCTTTCTTAGGTTTTCTTGAGGTAGTTCTGACAGGCTCTTaGCATGTCTTTCAAGAAGTTAGGAACTCCATTCTGCAAAGGAAA +
Preference number: 1 (lower is better)
Translates to: QFSFLGFLEVVLTGS*HVFQEVRNSILQRK
Trigger: TTTCCTTTGCAGAATGGAGTTCCTAACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACTACCTCAAGAAAACCTAAGAAAGAGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR CCA 90 bp CCATTCTGCAAAGGAAATGAGACTGTCATTTCTATGTCTTCACAGTaGTCACTCTTGATTCTTTGGGATGTGGCAGAAGGTAAACAATGT +
Preference number: 1 (lower is better)
Translates to: PFCKGNETVISMSSQ*SLLILWDVAEGKQC
Trigger: ACATTGTTTACCTTCTGCCACATCCCAAAGAATCAAGAGTGACCACTGTGAAGACATAGAAATGACAGTCTCATTTCCTTTGCAGAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR TCA 90 bp AATCAAGGTTCAGTATCATTATACACAGTGATTAAAATTTTTCCCTaGGATCATCAAGGCTGTGCCTTTGACATAGAAATACCTTACCCT +
Preference number: 1 (lower is better)
Translates to: NQGSVSLYTVIKIFP*DHQGCAFDIEIPYP
Trigger: AGGGTAAGGTATTTCTATGTCAAAGGCACAGCCTTGATGATCTCAGGGAAAAATTTTAATCACTGTGTATAATGATACTGAACCTTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR CCA 90 bp GGATCAAGGAGCAGGATATATTATTATTTAGTTAATGTTGAGCACTaGGCAAGACTTTTCCTAAATATTGTCTTATTTACTCCCCCTCTA +
Preference number: 1 (lower is better)
Translates to: GSRSRIYYYLVNVEH*ARLFLNIVLFTPPL
Trigger: TAGAGGGGGAGTAAATAAGACAATATTTAGGAAAAGTCTTGCCCAGTGCTCAACATTAACTAAATAATAATATATCCTGCTCCTTGATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR CAA 90 bp GCTCCCCTTCTTGCCGTCACTCTCGATCGCCAGGCTCTGCTTGTATaGCTTCACCCGGATCACCCCAGACCTCTCGCCAAGCTGAGGCAT +
Preference number: 2 (lower is better)
Translates to: APLLAVTLDRQALLV*LHPDHPRPLAKLRH
Trigger: ATGCCTCAGCTTGGCGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGAGAGTGACGGCAAGAAGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR TCA 90 bp AGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: SSPSQAGRNHKLQKSQPATAGEG*TVVGAL
Trigger: AAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGT...GGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp ACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCACAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: TKCHFQQPLPSWKKSQAAQPSPG*GERERK
Trigger: CTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTG...TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp TGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCCAGAGACACTTCCAGGTaGCACTTCCAGGTGGCACTT +
Preference number: 2 (lower is better)
Translates to: WWVLFQRHFQVALPGGTSRDTSR*HFQVAL
Trigger: AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCT...GGAAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp GAACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: ERNATSSSPSQAGRNHKLTAGEG*TVVGAL
Trigger: AAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGT...CAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp AGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCCAGTTTGGGTGCACTaGAAGTCAGCTCTGAACGAA +
Preference number: 2 (lower is better)
Translates to: SSPSQAGRNHKLQKSQPAPVWVH*KSALNE
Trigger: TTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGG...GGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp AGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCTGAACAGTGGTGGGTaGTCTTCCAGAGACACTTCC +
Preference number: 2 (lower is better)
Translates to: SGGCSSRDTSRWHFQVALLNSGG*SSRDTS
Trigger: GGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAG...AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp ACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAGGGAAGGCTGAACAGTaGTGGGTGCTCTTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: TKCHFQQPLPSWKKSQAAGKAEQ*WVLFQR
Trigger: TCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCC...TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp CATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGCAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: HKANGHWHVIQFGCTESQQPSPG*GERERK
Trigger: CTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTG...CTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp AGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCTCGATCGCCAGGCTCTaGTTGTATTGCTTCACCCGG +
Preference number: 2 (lower is better)
Translates to: SQPAQIVILKFCCVPPPTSIARL*LYCFTR
Trigger: CCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGA...GGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR CCA 90 bp GTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCGTGTTCCCAGCAGACGAGTGAGCTaGATGTCAGGCAAACATGCT +
Preference number: 2 (lower is better)
Translates to: VPPPTHPRKIAQWNDRVPSRRVS*MSGKHA
Trigger: AGCATGTTTGCCTGACATCCAGCTCACTCGTCTGCT...GGGAACACGATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp GAACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAGCCCCTCCCAAGCTaGAAGAAATCACAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: ERNATSSSPSQAGRNHKLQPLPS*KKSQAA
Trigger: TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTG...CAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCGCCAAGCTGAGGCATaGAGGTGCTCCGGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGRQAEA*RCSGPG
Trigger: TCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCG...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR CAA 90 bp AGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGT +
Preference number: 2 (lower is better)
Translates to: RDTSRWHFQVALPET*GGCTSRDINPWMQC
Trigger: ACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp AGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCAAGGTTTCCCTAGTCTaGCCCATATTGAACTGTAGA +
Preference number: 2 (lower is better)
Translates to: SSPSQAGRNHKLQKSQPAKVSLV*PILNCR
Trigger: TCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT...GGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCAAGGCTGAACAGTGGTaGGTGCTCTTCCAGAGACAC +
Preference number: 2 (lower is better)
Translates to: SQPAQIVILKFCCVPPPTKAEQW*VLFQRH
Trigger: GTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTT...GGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp CAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGTTTCCGGGAAGGCTGAACAGTaGTGGGTGCTCTTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: QSIFAFASCHSHLDASVSGKAEQ*WVLFQR
Trigger: TCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCC...GGAAACTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp CACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGAGACATTGGGTGGTTaGACTTCCAGAGACATCAAC +
Preference number: 2 (lower is better)
Translates to: HFQQPLPSWKKSQAAKEPETLGG*TSRDIN
Trigger: GTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC...TGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp ATGCACAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGGAAGAAATCACAAGCTaGAAAAGAGCCAGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: MHKASLLLLAATAILTPQEEITS*KRASPP
Trigger: GGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTC...CTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp ATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGGCTGAGGCATGGAGGTaGTCCGGGCCAGGATCACAT +
Preference number: 2 (lower is better)
Translates to: MDDEEKCGCHIMCPVRPLAEAWR*SGPGSH
Trigger: ATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGC...CAGAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR CCA 90 bp GTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCGTGTTCCCAGAGACATCAACCCATaGATGCAATGTTCCCAGTTC +
Preference number: 2 (lower is better)
Translates to: VPPPTHPRKIAQWNDRVPRDINP*MQCSQF
Trigger: GAACTGGGAACATTGCATCCATGGGTTGATGTCTCT...GGGAACACGATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp GAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCAGAGACACTTCCAGGTaGCACTTCCAGGTGGCACTT +
Preference number: 2 (lower is better)
Translates to: ETLGGCTSRDINPWMQCSRDTSR*HFQVAL
Trigger: AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCT...GGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp GAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCAAGGCTGAACAGTGGTaGGTGCTCTTCCAGAGACAC +
Preference number: 2 (lower is better)
Translates to: ETLGGCTSRDINPWMQCSKAEQW*VLFQRH
Trigger: GTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTT...GGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGGGGAAGGCTGAACAGTaGTGGGTGCTCTTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: SLISSTKHKANGHWHVIQGKAEQ*WVLFQR
Trigger: TCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCC...CTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCAGCAGACGAGTGAGCTaGATGTCAGGCAAACATGCT +
Preference number: 2 (lower is better)
Translates to: SQPAQIVILKFCCVPPPTSRRVS*MSGKHA
Trigger: AGCATGTTTGCCTGACATCCAGCTCACTCGTCTGCT...GGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATCAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: KTYWIITSNPSLISSTKHQPSPG*GERERK
Trigger: CTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTG...ATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: KLQKSQPAQIVILKFCCVQPSPG*GERERK
Trigger: CTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTG...GACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGAAGCCAGGACGGAATTTaGCCACCCGGGTTATCGAAG +
Preference number: 2 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRSQDGI*PPGLSK
Trigger: CTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCT...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR CAA 90 bp GCTCCACAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGTTaGGGTGCACTGAAAGTCAGCTCTGAACGAAATGCCACTTCCAGC +
Preference number: 2 (lower is better)
Translates to: APQSIRQMDIGTSSS*GALKVSSERNATSS
Trigger: GCTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTGTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR CAA 90 bp AGGAACTCCATTCTTGGCGGCCCAGTTAATGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAAGTAATACATGAAAACTTTGCTCCC +
Preference number: 2 (lower is better)
Translates to: RNSILGGPVNEPGRN*ATRVIEVIHENFAP
Trigger: GGGAGCAAAGTTTTCATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGGGCCGCCAAGAATGGAGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR TCA 90 bp ACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCACTTAGGCAGAATTCCTaGGAAAAAGGTGCAGAGTCA +
Preference number: 2 (lower is better)
Translates to: TKCHFQQPLPSWKKSQAALRQNS*EKGAES
Trigger: TGACTCTGCACCTTTTTCTCAGGAATTCTGCCTAAG...TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp ACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCGACCTCTCGCCAAGCTaGGGCATGGAGGTGCTCCGG +
Preference number: 2 (lower is better)
Translates to: TNSLRYPTLINPILWLYIDLSPS*GMEVLR
Trigger: CCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTC...GATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR GCA 90 bp AGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGGAAGAAATCACAAGCTaGAAAAGAGCCAGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: SLISSTKHKANGHWHVIQEEITS*KRASPP
Trigger: GGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTC...CTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGAGAAGAAATCACAAGCTaGAAAAGAGCCAGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKREEITS*KRASPP
Trigger: GGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTC...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCTTTGCTTTTGCTAGCTaGCACAGCCATCTTGACGCC +
Preference number: 2 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPFAFAS*HSHLDA
Trigger: GGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAA...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp CATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGCAGCCCCTCCCAAGCTaGAAGAAATCACAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: HKANGHWHVIQFGCTESQQPLPS*KKSQAA
Trigger: TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTG...CTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp AAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: KCGCHIMCPVRPLILLQMTAGEG*TVVGAL
Trigger: AAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGT...CATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp ATGCACAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGGATCGTGTTCCCTACTaGAGACTTCCCCTCCTAATA +
Preference number: 2 (lower is better)
Translates to: MHKASLLLLAATAILTPQDRVPY*RLPLLI
Trigger: TATTAGGAGGGGAAGTCTTCAGTAGGGAACACGATC...CTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp CAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCATACTGAAAGTCAGCTCTaGACGAAATGCCACTTCCAG +
Preference number: 2 (lower is better)
Translates to: QPAQIVILKFCCVPPPTHTESQL*TKCHFQ
Trigger: CTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGT...ATGGGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp CTTCCAGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAAACTGAAAGTCAGCTCTaGACGAAATGCCACTTCCAG +
Preference number: 2 (lower is better)
Translates to: LPETLGGCTSRDINPWMQTESQL*TKCHFQ
Trigger: CTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGT...TTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGACACAGTGGTCACTCTTaGTTCTTTGGGATGTGGCAG +
Preference number: 2 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRHSGHS*FFGMWQ
Trigger: CTGCCACATCCCAAAGAATCAAGAGTGACCACTGTG...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR GCA 90 bp GAGGTAGTTCTGACAGGCTCTTGCCATGTCTTTCAAGAAGTTAGGAACTCCATTCTTTGCTCCCCTTCTTaGCGTCACTCTCGATCGCCA +
Preference number: 2 (lower is better)
Translates to: EVVLTGSCHVFQEVRNSILCSPS*RHSRSP
Trigger: TGGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAG...AATGGAGTTCCTAACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR CCA 90 bp GCAAAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCAGAGACATCAACCCATaGATGCAATGTTCCCAGTTC +
Preference number: 2 (lower is better)
Translates to: AKVSLVCPILNCRRRQPSRDINP*MQCSQF
Trigger: GAACTGGGAACATTGCATCCATGGGTTGATGTCTCT...GCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGAGAGACACTTCCAGGTaGCACTTCCAGGTGGCACTT +
Preference number: 2 (lower is better)
Translates to: TSNPSLISSTKHKANGHWRDTSR*HFQVAL
Trigger: AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCT...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCTAGEG*TVVGAL
Trigger: AAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGT...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp CTCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTAAGGAAGCAGACGAGTaGGCTGGATGTCAGGCAAAC +
Preference number: 2 (lower is better)
Translates to: LMDDEEKCGCHIMCPVRPKEADE*AGCQAN
Trigger: GTTTGCCTGACATCCAGCTCACTCGTCTGCTTCCTT...AGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTGATCGTGTTCCCTACTaGAGACTTCCCCTCCTAATA +
Preference number: 2 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSDRVPY*RLPLLI
Trigger: TATTAGGAGGGGAAGTCTTCAGTAGGGAACACGATC...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGCCAGTTTGGGTGCACTaGAAGTCAGCTCTGAACGAA +
Preference number: 2 (lower is better)
Translates to: TSNPSLISSTKHKANGHWPVWVH*KSALNE
Trigger: TTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGG...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp TTTGTTGTGTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCGTAAAATGCAAAGCTTaGGAGGTACAGGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: FVVSLRPPIPVKLHNGMIVKCKA*EVQAAF
Trigger: AAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTAC...GATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGACACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp ATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGCTGAACAGTGGTGGGTaGTCTTCCAGAGACACTTCC +
Preference number: 2 (lower is better)
Translates to: MDDEEKCGCHIMCPVRPLLNSGG*SSRDTS
Trigger: GGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAG...CAGAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp TCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCGAAGAAATCACAAGCTaGAAAAGAGCCAGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: SWMMRKNVVVILCVRSGLEEITS*KRASPP
Trigger: GGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTC...GAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGACATCATAACAGCTACTaGTCCTCCACAAGTAGGAAC +
Preference number: 2 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRHHNSY*SSTSRN
Trigger: GTTCCTACTTGTGGAGGATCAGTAGCTGTTATGATG...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp GGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCTGGCAGCCTTTCCCCCAGTaGCATATGGAAAAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: GCHIMCPVRPLILLQMVWQPFPQ*HMEKRN
Trigger: ATTTCTCTTTTCCATATGTCACTGGGGGAAAGGCTG...CCAGACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTCAGCCTTTCCCCCAGTaGCATATGGAAAAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSQPFPQ*HMEKRN
Trigger: ATTTCTCTTTTCCATATGTCACTGGGGGAAAGGCTG...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp CATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGGTAAAATGCAAAGCTTaGGAGGTACAGGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: HKANGHWHVIQFGCTESQVKCKA*EVQAAF
Trigger: AAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTAC...CTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp AGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCATTAAAATTTTTCCCTaGGATCATCAAGGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: SQPAQIVILKFCCVPPPTIKIFP*DHQGCA
Trigger: GGCACAGCCTTGATGATCTCAGGGAAAAATTTTAAT...GGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp GACGCCTCAGTTTCCAGTAAAATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCTTTCTTAGGTTTTCTTaGGGTAGTTCTGACAGGCTC +
Preference number: 2 (lower is better)
Translates to: DASVSSKMQSLRGTGSLSFLRFS*GSSDRL
Trigger: GAGCCTGTCAGAACTACCTCAAGAAAACCTAAGAAA...GGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACTGGAAACTGAGGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp CAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCATACATCAACCCATGGATaGAATGTTCCCAGTTCTCTT +
Preference number: 2 (lower is better)
Translates to: QPAQIVILKFCCVPPPTHTSTHG*NVPSSL
Trigger: AAGAGAACTGGGAACATTGCATCCATGGGTTGATGT...ATGGGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp CAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGTTTCCACATCAACCCATGGATaGAATGTTCCCAGTTCTCTT +
Preference number: 2 (lower is better)
Translates to: QSIFAFASCHSHLDASVSTSTHG*NVPSSL
Trigger: AAGAGAACTGGGAACATTGCATCCATGGGTTGATGT...GGAAACTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp CACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTCTGAACAGTGGTGGGTaGTCTTCCAGAGACACTTCC +
Preference number: 2 (lower is better)
Translates to: HKLQKSQPAQIVILKFCCLNSGG*SSRDTS
Trigger: GGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAG...ACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp ATAACAGCTACTGATCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATAGAGACACTTCCAGGTaGCACTTCCAGGTGGCACTT +
Preference number: 2 (lower is better)
Translates to: ITATDPPQVGTRKDLLDYRDTSR*HFQVAL
Trigger: AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCT...ATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCCGTAAAATTGCACAATaGAATGATCGTGTTCCCTAC +
Preference number: 2 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPRKIAQ*NDRVPY
Trigger: GTAGGGAACACGATCATTCCATTGTGCAATTTTACG...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp CATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGCACAAGAAATGGGCTTaGGCTGGATTGTTACATTCT +
Preference number: 2 (lower is better)
Translates to: HKANGHWHVIQFGCTESQHKKWA*AGLLHS
Trigger: AGAATGTAACAATCCAGCCCAAGCCCATTTCTTGTG...CTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR TCA 90 bp AGGAAAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAAGATCGTGTTCCCTACTaGAGACTTCCCCTCCTAATA +
Preference number: 2 (lower is better)
Translates to: RKDLLDYHLKSQPNQLHKDRVPY*RLPLLI
Trigger: TATTAGGAGGGGAAGTCTTCAGTAGGGAACACGATC...TTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGAATTGCACAATGGAATaGTCGTGTTCCCTACTGAAG +
Preference number: 2 (lower is better)
Translates to: TSNPSLISSTKHKANGHWNCTME*SCSLLK
Trigger: CTTCAGTAGGGAACACGATCATTCCATTGTGCAATT...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp AAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATACTGAAAGTCAGCTCTaGACGAAATGCCACTTCCAG +
Preference number: 2 (lower is better)
Translates to: KTYWIITSNPSLISSTKHTESQL*TKCHFQ
Trigger: CTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGT...ATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTAATTTTACCTGGCTGTaGACTGTTATCCCTTCTACA +
Preference number: 2 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSNFTWL*TVIPST
Trigger: TGTAGAAGGGATAACAGTTCACAGCCAGGTAAAATT...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGAAGGTTTCCCTAGTCTaGCCCATATTGAACTGTAGA +
Preference number: 2 (lower is better)
Translates to: TSNPSLISSTKHKANGHWKVSLV*PILNCR
Trigger: TCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp AGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCTTTTTCACAAGGCTATaGACAAAGCATCTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: SQPAQIVILKFCCVPPPTFFTRL*TKHLCF
Trigger: AAAGCAAAGATGCTTTGTGCATAGCCTTGTGAAAAA...GGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAGCAAGAGACATCAACCCATaGATGCAATGTTCCCAGTTC +
Preference number: 2 (lower is better)
Translates to: NMLRKDVVVCRPLKTETARDINP*MQCSQF
Trigger: GAACTGGGAACATTGCATCCATGGGTTGATGTCTCT...TGCTGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCAAGGCTGAACAGTGGTaGGTGCTCTTCCAGAGACAC +
Preference number: 2 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVKAEQW*VLFQRH
Trigger: GTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTT...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTGGGAAGGCTGAACAGTaGTGGGTGCTCTTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: RYPTLINPILWLYILNFCGKAEQ*WVLFQR
Trigger: TCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCC...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTAGCAGACGAGTGAGCTaGATGTCAGGCAAACATGCT +
Preference number: 2 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCSRRVS*MSGKHA
Trigger: AGCATGTTTGCCTGACATCCAGCTCACTCGTCTGCT...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTaGCACGTCATCCAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: KTYWIITSNPSLISSTKHKANGH*HVIQFG
Trigger: CCCAAACTGGATGACGTGCCAATGTCCATTTGCCTT...ATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AAAATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAACGAGGAAAGACTTACTaGATTATCACCTCAAATCCC +
Preference number: 2 (lower is better)
Translates to: KMQSLRGTGSLSPSDIWKRGKTY*IITSNP
Trigger: GGGATTTGAGGTGATAATCCAGTAAGTCTTTCCTCG...TTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTCTATGTCTTCACAGTaGTCACTCTTGATTCTTTGG +
Preference number: 2 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSSMSSQ*SLLILW
Trigger: CCAAAGAATCAAGAGTGACCACTGTGAAGACATAGA...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR TCA 90 bp TCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATGTCCGGTCAGGCCTCTaGTACTTCTCCAAATGGTCT +
Preference number: 2 (lower is better)
Translates to: SSQKENKQSEVSHINKSHVRSGL*YFSKWS
Trigger: AGACCATTTGGAGAAGTATCAGAGGCCTGACCGGAC...ATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTAGGCTCTGCTTGTATTaGTTCACCCGGATCACCCCA +
Preference number: 2 (lower is better)
Translates to: RYPTLINPILWLYILNFCRLCLY*FTRITP
Trigger: TGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCT...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR CCA 90 bp TCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATCAGCCCCTCCCAAGCTaGAAGAAATCACAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: SSQKENKQSEVSHINKSHQPLPS*KKSQAA
Trigger: TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTG...ATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCGAGGAAAGACTTACTaGATTATCACCTCAAATCCC +
Preference number: 2 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGRGKTY*IITSNP
Trigger: GGGATTTGAGGTGATAATCCAGTAAGTCTTTCCTCG...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGAGTTAATGTTGAGCACTaGGCAAGACTTTTCCTAAAT +
Preference number: 2 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRVNVEH*ARLFLN
Trigger: ATTTAGGAAAAGTCTTGCCCAGTGCTCAACATTAAC...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR TCA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTCCAGTTTGGGTGCACTaGAAGTCAGCTCTGAACGAA +
Preference number: 2 (lower is better)
Translates to: RYPTLINPILWLYILNFCPVWVH*KSALNE
Trigger: TTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGG...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTAATTTTACCTGGCTGTaGACTGTTATCCCTTCTACA +
Preference number: 2 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGNFTWL*TVIPST
Trigger: TGTAGAAGGGATAACAGTTCACAGCCAGGTAAAATT...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp CACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTACATCAACCCATGGATaGAATGTTCCCAGTTCTCTT +
Preference number: 2 (lower is better)
Translates to: HKLQKSQPAQIVILKFCCTSTHG*NVPSSL
Trigger: AAGAGAACTGGGAACATTGCATCCATGGGTTGATGT...ACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp ACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCGAGACATTGGGTGGTTaGACTTCCAGAGACATCAAC +
Preference number: 2 (lower is better)
Translates to: TNSLRYPTLINPILWLYIETLGG*TSRDIN
Trigger: GTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC...GATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp ATAACAGCTACTGATCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATAGAGACATCAACCCATaGATGCAATGTTCCCAGTTC +
Preference number: 2 (lower is better)
Translates to: ITATDPPQVGTRKDLLDYRDINP*MQCSQF
Trigger: GAACTGGGAACATTGCATCCATGGGTTGATGTCTCT...ATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCTCCAGAGACATTGGGTaGTTGCACTTCCAGAGACAT +
Preference number: 2 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVSRDIG*LHFQRH
Trigger: ATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGA...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATCGAGGAAAGACTTACTaGATTATCACCTCAAATCCC +
Preference number: 2 (lower is better)
Translates to: KTYWIITSNPSLISSTKHRGKTY*IITSNP
Trigger: GGGATTTGAGGTGATAATCCAGTAAGTCTTTCCTCG...ATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCGAAAATGGTAAGGATTaGGGATCAAGGAGCAGGATA +
Preference number: 2 (lower is better)
Translates to: KLQKSQPAQIVILKFCCVENGKD*GSRSRI
Trigger: TATCCTGCTCCTTGATCCCCAATCCTTACCATTTTC...GACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR TCA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCCATCATAACAGCTACTaGTCCTCCACAAGTAGGAAC +
Preference number: 2 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVHHNSY*SSTSRN
Trigger: GTTCCTACTTGTGGAGGATCAGTAGCTGTTATGATG...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp AAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGTAAAATGCAAAGCTTaGGAGGTACAGGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: KQSEVSHINKSHSVALHPVKCKA*EVQAAF
Trigger: AAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTAC...AGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCGTAAAATGCAAAGCTTaGGAGGTACAGGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVVKCKA*EVQAAF
Trigger: AAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTAC...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp ATAACAGCTACTGATCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATAAGGTTTCCCTAGTCTaGCCCATATTGAACTGTAGA +
Preference number: 2 (lower is better)
Translates to: ITATDPPQVGTRKDLLDYKVSLV*PILNCR
Trigger: TCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT...ATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp AAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATACTCCAAAGTTGATGTaGTTTTTCACTCTTCCAAGG +
Preference number: 2 (lower is better)
Translates to: KTYWIITSNPSLISSTKHTPKLM*FFTLPR
Trigger: CCTTGGAAGAGTGAAAAAGCACATCAACTTTGGAGT...ATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR TCA 90 bp AAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTAATTGCACAATGGAATaGTCGTGTTCCCTACTGAAG +
Preference number: 2 (lower is better)
Translates to: KQSEVSHINKSHSVALHPNCTME*SCSLLK
Trigger: CTTCAGTAGGGAACACGATCATTCCATTGTGCAATT...AGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp TCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTTTTTCACAAGGCTATaGACAAAGCATCTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: SWMMRKNVVVILCVRSGLFFTRL*TKHLCF
Trigger: AAAGCAAAGATGCTTTGTGCATAGCCTTGTGAAAAA...GAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR GCA 90 bp CTCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTTTTTTCACAAGGCTATaGACAAAGCATCTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: LMDDEEKCGCHIMCPVRPFFTRL*TKHLCF
Trigger: AAAGCAAAGATGCTTTGTGCATAGCCTTGTGAAAAA...AGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR TCA 90 bp TTTCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCTTTCTTAGGTTTTCTTaGGGTAGTTCTGACAGGCTC +
Preference number: 2 (lower is better)
Translates to: FLPRKKTNSLRYPTLINPFLRFS*GSSDRL
Trigger: GAGCCTGTCAGAACTACCTCAAGAAAACCTAAGAAA...GGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CCA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTGAAATGGGCTTGGGCTaGATTGTTACATTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: RYPTLINPILWLYILNFCEMGLG*IVTFFQ
Trigger: TTGGAAGAATGTAACAATCCAGCCCAAGCCCATTTC...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR CCA 90 bp TCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCACTCTTGATTCTTTaGGATGTGGCAGAAGGTAAA +
Preference number: 2 (lower is better)
Translates to: SSQKENKQSEVSHINKSHSLLIL*DVAEGK
Trigger: TTTACCTTCTGCCACATCCCAAAGAATCAAGAGTGA...ATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR TCA 72 bp TGCTTCACCCGGATCACCCCAGACCTCTCGCCAAGCTaGGGCATGGAGGTGCTCCGGGCCAGGATCACATGG +
Preference number: 3 (lower is better)
Translates to: CFTRITPDLSPS*GMEVLRARITW
Trigger: CCATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTCTGGGGTGATCCGGGTGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR CCA 72 bp CCCGGATCACCCCAGACCTCTCGCCAAGCTGAGGCATaGAGGTGCTCCGGGCCAGGATCACATGGATCTTCC +
Preference number: 3 (lower is better)
Translates to: PGSPQTSRQAEA*RCSGPGSHGSS
Trigger: GGAAGATCCATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTCTGGGGTGATCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR GCA 72 bp TCACCCCAGACCTCTCGCCAAGCTGAGGCATGGAGGTaGTCCGGGCCAGGATCACATGGATCTTCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: SPQTSRQAEAWR*SGPGSHGSSSL
Trigger: AAGGGAGGAAGATCCATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTCTGGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR GCA 72 bp TTGCCGTCACTCTCGATCGCCAGGCTCTGCTTGTATTaGTTCACCCGGATCACCCCAGACCTCTCGCCAAGC +
Preference number: 3 (lower is better)
Translates to: LPSLSIARLCLY*FTRITPDLSPS
Trigger: GCTTGGCGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGAGAGTGACGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR GCA 72 bp CTCCCCTTCTTGCCGTCACTCTCGATCGCCAGGCTCTaGTTGTATTGCTTCACCCGGATCACCCCAGACCTC +
Preference number: 3 (lower is better)
Translates to: LPFLPSLSIARL*LYCFTRITPDL
Trigger: GAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGAGAGTGACGGCAAGAAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR TCA 72 bp CACGTCATCCAGTTTGGGTGCACTGAAAGTCAGCTCTaGACGAAATGCCACTTCCAGCAGCCCCTCCCAAGC +
Preference number: 3 (lower is better)
Translates to: HVIQFGCTESQL*TKCHFQQPLPS
Trigger: GCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGATGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR CCA 72 bp CCAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATTaGGTGGTTGCACTTCCAGAGACATCAACCCATGGA +
Preference number: 3 (lower is better)
Translates to: PGGTSRWHFQRH*VVALPETSTHG
Trigger: TCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR CCA 72 bp ATATTGAACTGTAGAAGAAGGCAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAGCAGACGAGTGAGCTG +
Preference number: 3 (lower is better)
Translates to: ILNCRRRQPSPG*GERERKQTSEL
Trigger: CAGCTCACTCGTCTGCTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTGCCTTCTTCTACAGTTCAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp AAACAGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGA +
Preference number: 3 (lower is better)
Translates to: KQQGKAEQWWVLFQRHFQALPET*GGCTSR
Trigger: TCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGC...CTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp ACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAGCTGCCACAGCCATCTaGACGCCTCAGTTTCCAGTA +
Preference number: 3 (lower is better)
Translates to: TKCHFQQPLPSWKKSQAAAATAI*TPQFPV
Trigger: TACTGGAAACTGAGGCGTCAAGATGGCTGTGGCAGC...TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR TCA 72 bp TGTAGGCCTCTGAAGACAGAAACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTTCCAGAGACACTTCCA +
Preference number: 3 (lower is better)
Translates to: CRPLKTETAGEG*TVVGALPETLP
Trigger: TGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGTTTCTGTCTTCAGAGGCCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp CACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGA +
Preference number: 3 (lower is better)
Translates to: HFQQPLPSWKKSQAAKEPALPET*GGCTSR
Trigger: TCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGC...TGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp CTTCCAGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAAACTTTGCTCCCCTTCTaGCCGTCACTCTCGATCGCC +
Preference number: 3 (lower is better)
Translates to: LPETLGGCTSRDINPWMQTLLPF*PSLSIA
Trigger: GGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAGT...TTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR CAA 90 bp CAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGTTTCCGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAA +
Preference number: 3 (lower is better)
Translates to: QSIFAFASCHSHLDASVSEPGRN*ATRVIE
Trigger: TTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTC...GGAAACTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR CAA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGA +
Preference number: 3 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSALPET*GGCTSR
Trigger: TCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGC...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp CAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAATCGCCAGGCTCTGCTaGTATTGCTTCACCCGGATC +
Preference number: 3 (lower is better)
Translates to: QSIRQMDIGTSSSLGALKIARLC*YCFTRI
Trigger: GATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGAT...TTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR TCA 72 bp AAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTaGAAGTCAGCTCTGAACGAAATGCCACTTCCAGCA +
Preference number: 3 (lower is better)
Translates to: KWTLARHPVWVH*KSALNEMPLPA
Trigger: TGCTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR GCA 72 bp CCTCCTAATAGTAAGCAAGCAAAGGTTTCCCTAGTCTaGCCCATATTGAACTGTAGAAGAAGGCAGCCCAGC +
Preference number: 3 (lower is better)
Translates to: PPNSKQAKVSLV*PILNCRRRQPS
Trigger: GCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGCTTGCTTACTATTAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp GACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGCTCTGAACGAAATCCCATCCCCGTAAAATaGCACAATGGAATGATCGTG +
Preference number: 3 (lower is better)
Translates to: DIGTSSSLGALKVSSERNPIPVK*HNGMIV
Trigger: CACGATCATTCCATTGTGCAATTTTACGGGGATGGG...ATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp AAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGCTGCCACAGCCATCTaGACGCCTCAGTTTCCAGTA +
Preference number: 3 (lower is better)
Translates to: KCGCHIMCPVRPLILLQMAATAI*TPQFPV
Trigger: TACTGGAAACTGAGGCGTCAAGATGGCTGTGGCAGC...CATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGAAAAGCATCTTTGCTTTaGCTAGCTGCCACAGCCATC +
Preference number: 3 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRKASLL*LAATAI
Trigger: GATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTT...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp CAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGTTTCCATGCACAAAGCATCTTaGCTTTTGCTAGCTGCCACA +
Preference number: 3 (lower is better)
Translates to: QSIFAFASCHSHLDASVSMHKAS*LLLAAT
Trigger: TGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT...GGAAACTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp ATAACAGCTACTGATCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATCAGGCTCTGCTTGTATaGCTTCACCCGGATCACCCC +
Preference number: 3 (lower is better)
Translates to: ITATDPPQVGTRKDLLDYQALLV*LHPDHP
Trigger: GGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTG...ATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR-3UTR CAA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGAATGCACAAAGCATCTTaGCTTTTGCTAGCTGCCACA +
Preference number: 3 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRMHKAS*LLLAAT
Trigger: TGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR GCA 72 bp CAAGGCTATGCACAAAGCATCTTTGCTTTTGCTAGCTaGCACAGCCATCTTGACGCCTCAGTTTCCAGTAAA +
Preference number: 3 (lower is better)
Translates to: QGYAQSIFAFAS*HSHLDASVSSK
Trigger: TTTACTGGAAACTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCATAGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR CCA 72 bp CTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTaGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAG +
Preference number: 3 (lower is better)
Translates to: LISSTKHKANGH*HVIQFGCTESQ
Trigger: CTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCTAGTCTGCCCCATATaGAACTGTAGAAGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGLVCPI*NCRRRQ
Trigger: CTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAG...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp GCAAACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACACCCATCCCCGTAAAATaGCACAATGGAATGATCGTG +
Preference number: 3 (lower is better)
Translates to: ANMLRKDVVVCRPLKTETPIPVK*HNGMIV
Trigger: CACGATCATTCCATTGTGCAATTTTACGGGGATGGG...TGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp ACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCGGCACGTCATCCAGTTaGGGTGCACTGAAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: TNSLRYPTLINPILWLYIGTSSS*GALKVS
Trigger: GCTGACTTTCAGTGCACCCAAACTGGATGACGTGCC...GATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp TCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCAAAGCATCTTTGCTTTaGCTAGCTGCCACAGCCATC +
Preference number: 3 (lower is better)
Translates to: SWMMRKNVVVILCVRSGLKASLL*LAATAI
Trigger: GATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTT...GAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp GGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCTGGAGCCAGGATTTGAAATaGCGTCTGTTTGACTCCAAA +
Preference number: 3 (lower is better)
Translates to: GCHIMCPVRPLILLQMVWSQDLK*RLFDSK
Trigger: TTTGGAGTCAAACAGACGCAATTTCAAATCCTGGCT...CCAGACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR CAA 90 bp AAAATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAACACAAGAAATGGGCTaGGGCTGGATTGTTACATTC +
Preference number: 3 (lower is better)
Translates to: KMQSLRGTGSLSPSDIWKTQEMG*GWIVTF
Trigger: GAATGTAACAATCCAGCCCAAGCCCATTTCTTGTGT...TTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR CAA 90 bp ATGCACAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGCAACAGGAACTTCTGTaGCAAAAAGGCCTTATATGT +
Preference number: 3 (lower is better)
Translates to: MHKASLLLLAATAILTPQQQELL*QKGLIC
Trigger: ACATATAAGGCCTTTTTGCAACAGAAGTTCCTGTTG...CTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR TCA 72 bp GCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTaGCATATGGAAAAGAGAAATCATCCATTTCCTCAT +
Preference number: 3 (lower is better)
Translates to: AKLERYRQPFPQ*HMEKRNHPFPH
Trigger: ATGAGGAAATGGATGATTTCTCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTGGCACGTCATCCAGTTaGGGTGCACTGAAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: RYPTLINPILWLYILNFCGTSSS*GALKVS
Trigger: GCTGACTTTCAGTGCACCCAAACTGGATGACGTGCC...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR TCA 72 bp AATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTaGTACTTCTCCAAATGGTCTGGCATCATAACAGCT +
Preference number: 3 (lower is better)
Translates to: NVVVILCVRSGL*YFSKWSGIITA
Trigger: AGCTGTTATGATGCCAGACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR CCA 72 bp ACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATaGATGCAATGTTCCCAGTTCTCTTTCTTAGGTTTT +
Preference number: 3 (lower is better)
Translates to: TLGGCTSRDINP*MQCSQFSFLGF
Trigger: AAAACCTAAGAAAGAGAACTGGGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp AAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGA +
Preference number: 3 (lower is better)
Translates to: KTNSLRYPTLINPILWLYALPET*GGCTSR
Trigger: TCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGC...GTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp AGGAAAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAAAGTAAAATGCAAAGCTaGAGAGGTACAGGCAGCCTT +
Preference number: 3 (lower is better)
Translates to: RKDLLDYHLKSQPNQLHKSKMQS*RGTGSL
Trigger: AAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACT...TTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp AAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGATGCACAAAGCATCTTaGCTTTTGCTAGCTGCCACA +
Preference number: 3 (lower is better)
Translates to: KCGCHIMCPVRPLILLQMMHKAS*LLLAAT
Trigger: TGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT...CATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp GCAAACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACACTTCCAAGGAATCTGTaGAGCTCTCTAGTAGTAGAT +
Preference number: 3 (lower is better)
Translates to: ANMLRKDVVVCRPLKTETLPRNL*SSLVVD
Trigger: ATCTACTACTAGAGAGCTCAACAGATTCCTTGGAAG...TGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR TCA 72 bp CGTAAAATTGCACAATGGAATGATCGTGTTCCCTACTaGAGACTTCCCCTCCTAATAGTAAGCAAGCAAAGG +
Preference number: 3 (lower is better)
Translates to: RKIAQWNDRVPY*RLPLLIVSKQR
Trigger: CCTTTGCTTGCTTACTATTAGGAGGGGAAGTCTTCAGTAGGGAACACGATCATTCCATTGTGCAATTTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR TCA 72 bp ATACTTCTCCAAATGGTCTGGCATCATAACAGCTACTaGTCCTCCACAAGTAGGAACGAGGAAAGACTTACT +
Preference number: 3 (lower is better)
Translates to: ILLQMVWHHNSY*SSTSRNEERLT
Trigger: AGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTATGATGCCAGACCATTTGGAGAAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR TCA 72 bp GATGCAATGTTCCCAGTTCTCTTTCTTAGGTTTTCTTaGGGTAGTTCTGACAGGCTCTTGCCATGTCTTTCA +
Preference number: 3 (lower is better)
Translates to: DAMFPVLFLRFS*GSSDRLLPCLS
Trigger: TGAAAGACATGGCAAGAGCCTGTCAGAACTACCTCAAGAAAACCTAAGAAAGAGAACTGGGAACATTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp AAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTCCCATCCCCGTAAAATaGCACAATGGAATGATCGTG +
Preference number: 3 (lower is better)
Translates to: KQSEVSHINKSHSVALHPPIPVK*HNGMIV
Trigger: CACGATCATTCCATTGTGCAATTTTACGGGGATGGG...AGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp ACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCAAAGCATCTTTGCTTTaGCTAGCTGCCACAGCCATC +
Preference number: 3 (lower is better)
Translates to: TNSLRYPTLINPILWLYIKASLL*LAATAI
Trigger: GATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTT...GATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTAGTTCTGACAGGCTCTaGCCATGTCTTTCAAGAAGT +
Preference number: 3 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCSSDRL*PCLSRS
Trigger: ACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACT...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417982.6
ENST00000576183.5
3UTR-3UTR CAA 90 bp TCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATCCCATCCCCGTAAAATaGCACAATGGAATGATCGTG +
Preference number: 3 (lower is better)
Translates to: SSQKENKQSEVSHINKSHPIPVK*HNGMIV
Trigger: CACGATCATTCCATTGTGCAATTTTACGGGGATGGG...ATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR GCA 72 bp CTTGCCATGTCTTTCAAGAAGTTAGGAACTCCATTCTaGAAAGGAAATGAGACTGTCATTTCTATGTCTTCA +
Preference number: 3 (lower is better)
Translates to: LAMSFKKLGTPF*KGNETVISMSS
Trigger: TGAAGACATAGAAATGACAGTCTCATTTCCTTTGCAGAATGGAGTTCCTAACTTCTTGAAAGACATGGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR-3UTR CAA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTTGTTTGACTCCAAAGTaGATGTGCTTTTTCACTCTT +
Preference number: 3 (lower is better)
Translates to: RYPTLINPILWLYILNFCCLTPK*MCFFTL
Trigger: AAGAGTGAAAAAGCACATCAACTTTGGAGTCAAACA...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp AGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGGCCAGAGCGGGCTGCTaGAGCTCGGCGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRGRLNSGGCSSRDTSRWARAGC*SSAQAS
Trigger: GGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGC...CCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp TGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCCGACCTCTCGCCAAGCTaGGGCATGGAGGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: WWVLFQRHFQVALPGGTSDLSPS*GMEVLR
Trigger: CCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTC...GGAAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp TGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCCAGAGACCTCTCGCCAAGCTaGGGCATGGAGGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: WVLFQRHFQVALPGGTSRDLSPS*GMEVLR
Trigger: CCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTC...TCTGGAAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TCCAGTTTGGGTGCACTGAAAGTCAGCTCTGAACGAAATGCCACTTCCAGCAGCGCCAGAGCGGGCTGCTaGAGCTCGGCGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSLGALKVSSERNATSSSARAGC*SSAQAS
Trigger: GGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGC...GCTGCTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp CAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATTGGGTGGTTGCACTTCCAGTGCACGGCAGTCACTTaGAGGCACCGCCCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: QVALPGGTSRDIGWLHFQCTAVT*RHRPCA
Trigger: AGCGCAGGGGCGGTGCCTCCAAGTGACTGCCGTGCA...CTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325214.10
ENST00000417982.6
CDS-3UTR CCA 90 bp CAGGATCACATGGATCTTCCTCCCTTCCATGTCCAGGTCTCGCCGCTGCCGAAGGGTCCTCCAGCGGGTTaGCCGCTACCTTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QDHMDLPPFHVQVSPLPKGPPAG*PLPCPA
Trigger: TGCTGGACAAGGTAGCGGCCAACCCGCTGGAGGACC...CTTCGGCAGCGGCGAGACCTGGACATGGAAGGGAGGAAGATCCATGTGATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR TCA 90 bp AGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGGCAGCCGGTAGATGCTaGTGCCCGAGGTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: SRGRLNSGGCSSRDTSRWAAGRC*CPRSPL
Trigger: TAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGC...CCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
3UTR CAA 72 bp CTTGCCGTCACTCTCGATCGCCAGGCTCTGCTTGTATaGCTTCACCCGGATCACCCCAGACCTCTCGCCAAG +
Preference number: 4 (lower is better)
Translates to: LAVTLDRQALLV*LHPDHPRPLAK
Trigger: CTTGGCGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGAGAGTGACGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR CAA 72 bp CCCTTCTTGCCGTCACTCTCGATCGCCAGGCTCTGCTaGTATTGCTTCACCCGGATCACCCCAGACCTCTCG +
Preference number: 4 (lower is better)
Translates to: PFLPSLSIARLC*YCFTRITPDLS
Trigger: CGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGAGAGTGACGGCAAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR CCA 90 bp AGGATCACATGGATCTTCCTCCCTTCCATGTCCAGGTCTCGCCGCTGCCGAAGGAGCCAGGACGGAATTTaGCCACCCGGGTTATCGAAG +
Preference number: 4 (lower is better)
Translates to: RITWIFLPSMSRSRRCRRSQDGI*PPGLSK
Trigger: CTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCT...CCTTCGGCAGCGGCGAGACCTGGACATGGAAGGGAGGAAGATCCATGTGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR CCA 90 bp AGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGGGGAAGGCTGAACAGTaGTGGGTGCTCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SRGRLNSGGCSSRDTSRWGKAEQ*WVLFQR
Trigger: TCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCC...CCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCTGAGGCATGGAGGTaGTCCGGGCCAGGATCACAT +
Preference number: 4 (lower is better)
Translates to: HFQQPLPSWKKSQAAKEPAEAWR*SGPGSH
Trigger: ATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGC...TGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCTGAACAGTGGTGGGTaGTCTTCCAGAGACACTTCC +
Preference number: 4 (lower is better)
Translates to: SSPSQAGRNHKLQKSQPALNSGG*SSRDTS
Trigger: GGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAG...GGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp GACGCCTCAGTTTCCAGTAAAATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCGCCAAGCTGAGGCATaGAGGTGCTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DASVSSKMQSLRGTGSLSRQAEA*RCSGPG
Trigger: TCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCG...GGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACTGGAAACTGAGGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TCCAGTTTGGGTGCACTGAAAGTCAGCTCTGAACGAAATGCCACTTCCAGCAGCCAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSLGALKVSSERNATSSSQPSPG*GERERK
Trigger: CTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTG...GCTGCTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCGACCTCTCGCCAAGCTaGGGCATGGAGGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RDIGWLHFQRHQPMDAMFDLSPS*GMEVLR
Trigger: CCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTC...GAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp GCAAAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCCAGGCCTCCCAGAACTaGTCCTCCGAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: AKVSLVCPILNCRRRQPSQASQN*SSEKLP
Trigger: CGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTG...GCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATTGGGTGGTTGCACTTCCAGCTGAACAGTGGTGGGTaGTCTTCCAGAGACACTTCC +
Preference number: 4 (lower is better)
Translates to: QVALPGGTSRDIGWLHFQLNSGG*SSRDTS
Trigger: GGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAG...CTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTGAAGAAATCACAAGCTaGAAAAGAGCCAGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SGGCSSRDTSRWHFQVALEEITS*KRASPP
Trigger: GGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTC...AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp TGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCCTTTGCTTTTGCTAGCTaGCACAGCCATCTTGACGCC +
Preference number: 4 (lower is better)
Translates to: WWVLFQRHFQVALPGGTSFAFAS*HSHLDA
Trigger: GGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAA...GGAAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TTTGTTGTGTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCCAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FVVSLRPPIPVKLHNGMIQPSPG*GERERK
Trigger: CTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTG...GATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGACACAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TCTGCTTGTATTGCTTCACCCGGATCACCCCAGACCTCTCGCCAAGCTGAGGCACAGCCCCTCCCAAGCTaGAAGAAATCACAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SACIASPGSPQTSRQAEAQPLPS*KKSQAA
Trigger: TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTG...TGCCTCAGCTTGGCGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417982.6
3UTR CAA 72 bp TCCAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGAGACATCAACCCATGG +
Preference number: 4 (lower is better)
Translates to: SRWHFQVALPET*GGCTSRDINPW
Trigger: CCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGACCTCTCGCCAAGCTaGGGCATGGAGGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: QSIRQMDIGTSSSLGALKDLSPS*GMEVLR
Trigger: CCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTC...TTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCCCAACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KVSLVCPILNCRRRQPSPTAGEG*TVVGAL
Trigger: AAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGT...TGGGCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCACTGAAAGTCAGCTCTaGACGAAATGCCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSPSQAGRNHKLQKSQPATESQL*TKCHFQ
Trigger: CTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGT...GGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCGGCGGAGCTCCTTCCTaGGCCGGAGAAGACGCGCCC +
Preference number: 4 (lower is better)
Translates to: KLQKSQPAQIVILKFCCVGGAPS*AGEDAP
Trigger: GGGCGCGTCTTCTCCGGCTCAGGAAGGAGCTCCGCC...GACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR TCA 90 bp AGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCACAGTGGTCACTCTTaGTTCTTTGGGATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SGGCSSRDTSRWHFQVALHSGHS*FFGMWQ
Trigger: CTGCCACATCCCAAAGAATCAAGAGTGACCACTGTG...AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR GCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCCAGGCCTCCCAGAACTaGTCCTCCGAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPQASQN*SSEKLP
Trigger: CGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTG...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp GAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCGCTGAGGCATGGAGGTaGTCCGGGCCAGGATCACAT +
Preference number: 4 (lower is better)
Translates to: ETLGGCTSRDINPWMQCSAEAWR*SGPGSH
Trigger: ATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGC...GGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCATCGATCGCCAGGCTCTaGTTGTATTGCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: HFQQPLPSWKKSQAAKEPSIARL*LYCFTR
Trigger: CCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGA...TGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTGCCAGAGCGGGCTGCTaGAGCTCGGCGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCARAGC*SSAQAS
Trigger: GGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGC...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp ACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTCTTGCCAGAGCGGGCTGCTaGAGCTCGGCGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TCTHFSVSTKTQLLFSCLARAGC*SSAQAS
Trigger: GGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGC...AAGACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR CCA 90 bp CACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAAGCCAGGACGGAATTTaGCCACCCGGGTTATCGAAG +
Preference number: 4 (lower is better)
Translates to: HFQQPLPSWKKSQAAKEPSQDGI*PPGLSK
Trigger: CTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCT...TGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp CAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATTGGGTGGTTGCACTTCCAGAGCAGACGAGTGAGCTaGATGTCAGGCAAACATGCT +
Preference number: 4 (lower is better)
Translates to: QVALPGGTSRDIGWLHFQSRRVS*MSGKHA
Trigger: AGCATGTTTGCCTGACATCCAGCTCACTCGTCTGCT...CTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp GACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGCTCTGAACGAAATCAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: DIGTSSSLGALKVSSERNQPSPG*GERERK
Trigger: CTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTG...ATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp CCAGTTAATGAGCCAGGACGGAATTTGGCCACCCGGGTTATCGAAGTAATACATCAGCCCAGCCCAGGATaGGGGGAGCGAGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PVNEPGRNLATRVIEVIHQPSPG*GERERK
Trigger: CTTCCTTTCTCGCTCCCCCCATCCTGGGCTGGGCTG...ATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR TCA 90 bp CAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGTTTCCACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: QSIFAFASCHSHLDASVSTAGEG*TVVGAL
Trigger: AAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGT...GGAAACTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATTGGGTGGTTGCACTTCCAGGATCGTGTTCCCTACTaGAGACTTCCCCTCCTAATA +
Preference number: 4 (lower is better)
Translates to: QVALPGGTSRDIGWLHFQDRVPY*RLPLLI
Trigger: TATTAGGAGGGGAAGTCTTCAGTAGGGAACACGATC...CTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CAGGATCACATGGATCTTCCTCCCTTCCATGTCCAGGTCTCGCCGCTGCCGAAGGTAAAATGCAAAGCTTaGGAGGTACAGGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: QDHMDLPPFHVQVSPLPKVKCKA*EVQAAF
Trigger: AAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTAC...CTTCGGCAGCGGCGAGACCTGGACATGGAAGGGAGGAAGATCCATGTGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR GCA 90 bp CAGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCAGGCCTCCCAGAACTaGTCCTCCGAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: QRHWVVALPETSTHGCNVQASQN*SSEKLP
Trigger: CGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTG...AACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGGCTGAGGCATGGAGGTaGTCCGGGCCAGGATCACAT +
Preference number: 4 (lower is better)
Translates to: SLISSTKHKANGHWHVIQAEAWR*SGPGSH
Trigger: ATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGC...CTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCATCAACTCCCCTGGATCTaGACGGCAGTCACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QPAQIVILKFCCVPPPTHQLPWI*TAVTWR
Trigger: CCTCCAAGTGACTGCCGTGCAGATCCAGGGGAGTTG...ATGGGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325214.10
ENST00000417982.6
CDS-3UTR CCA 90 bp AACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAGCACGCCAAGCTGAGGCATaGAGGTGCTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NMLRKDVVVCRPLKTETARQAEA*RCSGPG
Trigger: TCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCG...TGCTGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp ATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGCGCCAAGCTGAGGCATaGAGGTGCTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: MDDEEKCGCHIMCPVRPLRQAEA*RCSGPG
Trigger: TCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCG...CAGAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp GCAAAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCAGCCAGGACGGAATTTaGCCACCCGGGTTATCGAAG +
Preference number: 4 (lower is better)
Translates to: AKVSLVCPILNCRRRQPSSQDGI*PPGLSK
Trigger: CTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCT...GCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp CACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCACAGCCCCTCCCAAGCTaGAAGAAATCACAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: HFQQPLPSWKKSQAAKEPQPLPS*KKSQAA
Trigger: TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTG...TGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RDIGWLHFQRHQPMDAMFTAGEG*TVVGAL
Trigger: AAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGT...GAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCAATTGCACAATGGAATaGTCGTGTTCCCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: SSPSQAGRNHKLQKSQPANCTME*SCSLLK
Trigger: CTTCAGTAGGGAACACGATCATTCCATTGTGCAATT...GGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CCAGTTAATGAGCCAGGACGGAATTTGGCCACCCGGGTTATCGAAGTAATACATGAGGCTGAACTCCTGTaGCCTTCCAACTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PVNEPGRNLATRVIEVIHEAELL*PSNSPG
Trigger: TCCAGGGGAGTTGGAAGGTCACAGGAGTTCAGCCTC...ATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR TCA 90 bp CACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGCTAGCTCCAGAGCTTaGGACAGGGTCCGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: HKLQKSQPAQIVILKFCCASSRA*DRVRAE
Trigger: CTCCGCCCGGACCCTGTCTCAAGCTCTGGAGCTAGC...ACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR GCA 90 bp TCCAGTTTGGGTGCACTGAAAGTCAGCTCTGAACGAAATGCCACTTCCAGCAGCAGGCTCTGCTTGTATTaGTTCACCCGGATCACCCCA +
Preference number: 4 (lower is better)
Translates to: SSLGALKVSSERNATSSSRLCLY*FTRITP
Trigger: TGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCT...GCTGCTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCTCGATCGCCAGGCTCTaGTTGTATTGCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPSIARL*LYCFTR
Trigger: CCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGA...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCCTTTGCTCCCCTTCTTaGCGTCACTCTCGATCGCCA +
Preference number: 4 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPLCSPS*RHSRSP
Trigger: TGGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAG...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp GAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCCTTTGCTCCCCTTCTTaGCGTCACTCTCGATCGCCA +
Preference number: 4 (lower is better)
Translates to: ETLGGCTSRDINPWMQCSLCSPS*RHSRSP
Trigger: TGGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAG...GGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCTGAACAGTGGTGGGTaGTCTTCCAGAGACACTTCC +
Preference number: 4 (lower is better)
Translates to: SQPAQIVILKFCCVPPPTLNSGG*SSRDTS
Trigger: GGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAG...GGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTCAACTCCCCTGGATCTaGACGGCAGTCACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSQLPWI*TAVTWR
Trigger: CCTCCAAGTGACTGCCGTGCAGATCCAGGGGAGTTG...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325214.10
ENST00000417982.6
CDS-3UTR CCA 90 bp AAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCCCAAAGGCTGAACAGTGGTaGGTGCTCTTCCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: KVSLVCPILNCRRRQPSPKAEQW*VLFQRH
Trigger: GTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTT...TGGGCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCCGAAATGGGCTTGGGCTaGATTGTTACATTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: WWVLFQRHFQVALPGGTSEMGLG*IVTFFQ
Trigger: TTGGAAGAATGTAACAATCCAGCCCAAGCCCATTTC...GGAAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR TCA 90 bp GATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTGACCTCTCGCCAAGCTaGGGCATGGAGGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: DTCTHFSVSTKTQLLFSCDLSPS*GMEVLR
Trigger: CCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTC...ACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR TCA 90 bp CAAGCAAAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAAGGAAGCAGACGAGTaGGCTGGATGTCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: QAKVSLVCPILNCRRRQPKEADE*AGCQAN
Trigger: GTTTGCCTGACATCCAGCTCACTCGTCTGCTTCCTT...GGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ATGCACAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGAAGGAAGCAGACGAGTaGGCTGGATGTCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: MHKASLLLLAATAILTPQKEADE*AGCQAN
Trigger: GTTTGCCTGACATCCAGCTCACTCGTCTGCTTCCTT...CTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGTTTCCAAGGAAGCAGACGAGTaGGCTGGATGTCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: QSIFAFASCHSHLDASVSKEADE*AGCQAN
Trigger: GTTTGCCTGACATCCAGCTCACTCGTCTGCTTCCTT...GGAAACTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GAACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGGATCGTGTTCCCTACTaGAGACTTCCCCTCCTAATA +
Preference number: 4 (lower is better)
Translates to: ERNATSSSPSQAGRNHKLDRVPY*RLPLLI
Trigger: TATTAGGAGGGGAAGTCTTCAGTAGGGAACACGATC...CAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CAGGATCACATGGATCTTCCTCCCTTCCATGTCCAGGTCTCGCCGCTGCCGAAGAATTTTACCTGGCTGTaGACTGTTATCCCTTCTACA +
Preference number: 4 (lower is better)
Translates to: QDHMDLPPFHVQVSPLPKNFTWL*TVIPST
Trigger: TGTAGAAGGGATAACAGTTCACAGCCAGGTAAAATT...CTTCGGCAGCGGCGAGACCTGGACATGGAAGGGAGGAAGATCCATGTGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR TCA 90 bp AGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCATTAAAATTTTTCCCTaGGATCATCAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSPSQAGRNHKLQKSQPAIKIFP*DHQGCA
Trigger: GGCACAGCCTTGATGATCTCAGGGAAAAATTTTAAT...GGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCAGGCTCTGCTTGTATTaGTTCACCCGGATCACCCCA +
Preference number: 4 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPRLCLY*FTRITP
Trigger: TGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCT...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGACTTTGCTCCCCTTCTTaGCGTCACTCTCGATCGCCA +
Preference number: 4 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRLCSPS*RHSRSP
Trigger: TGGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAG...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATTGGGTGGTTGCACTTCCAGACATCAACCCATGGATaGAATGTTCCCAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QVALPGGTSRDIGWLHFQTSTHG*NVPSSL
Trigger: AAGAGAACTGGGAACATTGCATCCATGGGTTGATGT...CTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCATCTGAACAGTGGTGGGTaGTCTTCCAGAGACACTTCC +
Preference number: 4 (lower is better)
Translates to: QPAQIVILKFCCVPPPTHLNSGG*SSRDTS
Trigger: GGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAG...ATGGGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CATGGATCTTCCTCCCTTCCATGTCCAGGTCTCGCCGCTGCCGAAGGTAGACATAAGGTTTCCCTAGTCTaGCCCATATTGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: HGSSSLPCPGLAAAEGRHKVSLV*PILNCR
Trigger: TCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT...ATGTCTACCTTCGGCAGCGGCGAGACCTGGACATGGAAGGGAGGAAGATCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR GCA 90 bp CAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGTTTCCGAAGAAATCACAAGCTaGAAAAGAGCCAGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: QSIFAFASCHSHLDASVSEEITS*KRASPP
Trigger: GGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTC...GGAAACTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCGATACAAACTACCACTaGAGTTCCCTCCCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPDTNYH*SSLPWR
Trigger: CCGCCAAGGGAGGGAACTGCAGTGGTAGTTTGTATC...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp ACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTCTTCGCCAAGCTGAGGCATaGAGGTGCTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TCTHFSVSTKTQLLFSCLRQAEA*RCSGPG
Trigger: TCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCG...AAGACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR CCA 90 bp CAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGTTTCCAGAGACACTTCCAGGTaGCACTTCCAGGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: QSIFAFASCHSHLDASVSRDTSR*HFQVAL
Trigger: AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCT...GGAAACTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TTTGTTGTGTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCAAGGCTGAACAGTGGTaGGTGCTCTTCCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: FVVSLRPPIPVKLHNGMIKAEQW*VLFQRH
Trigger: GTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTT...GATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGACACAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCCCGTAAAATTGCACAATaGAATGATCGTGTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: WWVLFQRHFQVALPGGTSRKIAQ*NDRVPY
Trigger: GTAGGGAACACGATCATTCCATTGTGCAATTTTACG...GGAAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTACCTTCCAACTCCCCTaGATCTGCACGGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSTFQLP*ICTAVT
Trigger: AGTGACTGCCGTGCAGATCCAGGGGAGTTGGAAGGT...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325214.10
ENST00000417982.6
CDS-3UTR TCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCGACCTCTCGCCAAGCTaGGGCATGGAGGTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFDLSPS*GMEVLR
Trigger: CCGGAGCACCTCCATGCCTCAGCTTGGCGAGAGGTC...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR TCA 90 bp AGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCTATCGAAGTAATACATaGAAACTTTGCTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSPSQAGRNHKLQKSQPAYRSNT*KLCSPS
Trigger: AGAAGGGGAGCAAAGTTTTCATGTATTACTTCGATA...GGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCCCAGTTTGGGTGCACTaGAAGTCAGCTCTGAACGAA +
Preference number: 4 (lower is better)
Translates to: ETLGGCTSRDINPWMQCSPVWVH*KSALNE
Trigger: TTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGG...GGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGTAAAATGCAAAGCTTaGGAGGTACAGGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HFQQPLPSWKKSQAAKEPVKCKA*EVQAAF
Trigger: AAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTAC...TGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp TCTGCTTGTATTGCTTCACCCGGATCACCCCAGACCTCTCGCCAAGCTGAGGCAATTAAAATTTTTCCCTaGGATCATCAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SACIASPGSPQTSRQAEAIKIFP*DHQGCA
Trigger: GGCACAGCCTTGATGATCTCAGGGAAAAATTTTAAT...TGCCTCAGCTTGGCGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR GCA 90 bp AAACAGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGACATCAACCCATGGATaGAATGTTCCCAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KQQGKAEQWWVLFQRHFQTSTHG*NVPSSL
Trigger: AAGAGAACTGGGAACATTGCATCCATGGGTTGATGT...CTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCCGCCAAGCTGAGGCATaGAGGTGCTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFRQAEA*RCSGPG
Trigger: TCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCG...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR CCA 90 bp AAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCCCATCCAGAGACATTGGGTaGTTGCACTTCCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: KVSLVCPILNCRRRQPSPSRDIG*LHFQRH
Trigger: ATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGA...TGGGCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGAGAGACACTTCCAGGTaGCACTTCCAGGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: SLISSTKHKANGHWHVIQRDTSR*HFQVAL
Trigger: AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCT...CTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AAAATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAGGGAAGGCTGAACAGTaGTGGGTGCTCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KMQSLRGTGSLSPSDIWKGKAEQ*WVLFQR
Trigger: TCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCC...TTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp GACGCCTCAGTTTCCAGTAAAATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCAGCAGACGAGTGAGCTaGATGTCAGGCAAACATGCT +
Preference number: 4 (lower is better)
Translates to: DASVSSKMQSLRGTGSLSSRRVS*MSGKHA
Trigger: AGCATGTTTGCCTGACATCCAGCTCACTCGTCTGCT...GGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACTGGAAACTGAGGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCTGCACGGCAGTCACTTaGAGGCACCGCCCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVCTAVT*RHRPCA
Trigger: AGCGCAGGGGCGGTGCCTCCAAGTGACTGCCGTGCA...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325214.10
ENST00000417982.6
3UTR CAA 72 bp TTTGTTGTGTCCCTCCGCCCACCCATCCCCGTAAAATaGCACAATGGAATGATCGTGTTCCCTACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: FVVSLRPPIPVK*HNGMIVFPTED
Trigger: GTCTTCAGTAGGGAACACGATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGACACAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTGCAGCCGGTAGATGCTaGTGCCCGAGGTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCAAGRC*CPRSPL
Trigger: TAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGC...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTGCAGCCGGTAGATGCTaGTGCCCGAGGTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: DTCTHFSVSTKTQLLFSCAAGRC*CPRSPL
Trigger: TAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGC...ACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR TCA 90 bp CACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCATTTCTTAGGTTTTCTTaGGGTAGTTCTGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: HFQQPLPSWKKSQAAKEPFLRFS*GSSDRL
Trigger: GAGCCTGTCAGAACTACCTCAAGAAAACCTAAGAAA...TGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCACAGCAGGGGAAGGCTaGACAGTGGTGGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KLQKSQPAQIVILKFCCVTAGEG*TVVGAL
Trigger: AAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGT...GACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCCAGTTTGGGTGCACTaGAAGTCAGCTCTGAACGAA +
Preference number: 4 (lower is better)
Translates to: RDIGWLHFQRHQPMDAMFPVWVH*KSALNE
Trigger: TTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGG...GAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCCGGTCAGGCCTCTaGTACTTCTCCAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: QSIRQMDIGTSSSLGALKVRSGL*YFSKWS
Trigger: AGACCATTTGGAGAAGTATCAGAGGCCTGACCGGAC...TTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCCGCTTGGTTCTGCTCTaGTTGGCCGGGTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFRLVLL*LAGCGG
Trigger: GCCACCACACCCGGCCAATCAGAGCAGAACCAAGCG...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572536.1
CDS-3UTR GCA 90 bp AAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACGTCTCCACTAGGAGCTaGCAGTCGGCCCCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KTNSLRYPTLINPILWLYVSTRS*QSAPAR
Trigger: TCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGAC...GTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTGCTGAGGCATGGAGGTaGTCCGGGCCAGGATCACAT +
Preference number: 4 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCAEAWR*SGPGSH
Trigger: ATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGC...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp GATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTGCTGAGGCATGGAGGTaGTCCGGGCCAGGATCACAT +
Preference number: 4 (lower is better)
Translates to: DTCTHFSVSTKTQLLFSCAEAWR*SGPGSH
Trigger: ATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGC...ACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR GCA 90 bp CAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAAGGCTCTGCTTGTATTaGTTCACCCGGATCACCCCA +
Preference number: 4 (lower is better)
Translates to: QSIRQMDIGTSSSLGALKRLCLY*FTRITP
Trigger: TGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCT...TTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CAGTGGTCACTCTTGATTCTTTGGGATGTGGCAGAAGGTAAACAATGTTGGCTTTCGATCGCCAGGCTCTaGTTGTATTGCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: QWSLLILWDVAEGKQCWLSIARL*LYCFTR
Trigger: CCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGA...AAGCCAACATTGTTTACCTTCTGCCACATCCCAAAGAATCAAGAGTGACCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp AAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACCGCCAAGCTGAGGCATaGAGGTGCTCCGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KTNSLRYPTLINPILWLYRQAEA*RCSGPG
Trigger: TCCTGGCCCGGAGCACCTCCATGCCTCAGCTTGGCG...GTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTAGCCAGGACGGAATTTaGCCACCCGGGTTATCGAAG +
Preference number: 4 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGSQDGI*PPGLSK
Trigger: CTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCT...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCTCCAGAGACATTGGGTaGTTGCACTTCCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPSRDIG*LHFQRH
Trigger: ATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGA...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTAGCAGACGAGTGAGCTaGATGTCAGGCAAACATGCT +
Preference number: 4 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSSRRVS*MSGKHA
Trigger: AGCATGTTTGCCTGACATCCAGCTCACTCGTCTGCT...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp GCAAACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAACCTTCCAACTCCCCTaGATCTGCACGGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: ANMLRKDVVVCRPLKTETTFQLP*ICTAVT
Trigger: AGTGACTGCCGTGCAGATCCAGGGGAGTTGGAAGGT...TGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325214.10
ENST00000417982.6
CDS-3UTR CCA 90 bp CACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCACACAAGAAATGGGCTTaGGCTGGATTGTTACATTCT +
Preference number: 4 (lower is better)
Translates to: HFQQPLPSWKKSQAAKEPHKKWA*AGLLHS
Trigger: AGAATGTAACAATCCAGCCCAAGCCCATTTCTTGTG...TGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576183.5
3UTR CAA 72 bp AGCATAAGGCAAATGGACATTGGCACGTCATCCAGTTaGGGTGCACTGAAAGTCAGCTCTGAACGAAATGCC +
Preference number: 4 (lower is better)
Translates to: SIRQMDIGTSSS*GALKVSSERNA
Trigger: GGCATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
3UTR CAA 72 bp ATTCTTGGCGGCCCAGTTAATGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAAGTAATACATGAAAAC +
Preference number: 4 (lower is better)
Translates to: ILGGPVNEPGRN*ATRVIEVIHEN
Trigger: GTTTTCATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGGGCCGCCAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR TCA 90 bp AAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCCCATTTCTTAGGTTTTCTTaGGGTAGTTCTGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: KVSLVCPILNCRRRQPSPFLRFS*GSSDRL
Trigger: GAGCCTGTCAGAACTACCTCAAGAAAACCTAAGAAA...TGGGCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCTGGGATCGTGTTCCCTACTaGAGACTTCCCCTCCTAATA +
Preference number: 4 (lower is better)
Translates to: GCHIMCPVRPLILLQMVWDRVPY*RLPLLI
Trigger: TATTAGGAGGGGAAGTCTTCAGTAGGGAACACGATC...CCAGACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CAAGCAAAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCCATCATAACAGCTACTaGTCCTCCACAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: QAKVSLVCPILNCRRRQPHHNSY*SSTSRN
Trigger: GTTCCTACTTGTGGAGGATCAGTAGCTGTTATGATG...GGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GCAAACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAGTCCGGTCAGGCCTCTaGTACTTCTCCAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: ANMLRKDVVVCRPLKTETVRSGL*YFSKWS
Trigger: AGACCATTTGGAGAAGTATCAGAGGCCTGACCGGAC...TGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CTCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTGTCCGGTCAGGCCTCTaGTACTTCTCCAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: LMDDEEKCGCHIMCPVRPVRSGL*YFSKWS
Trigger: AGACCATTTGGAGAAGTATCAGAGGCCTGACCGGAC...AGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ATGCACAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGCTTAGGCAGAATTCCTaGGAAAAAGGTGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: MHKASLLLLAATAILTPQLRQNS*EKGAES
Trigger: TGACTCTGCACCTTTTTCTCAGGAATTCTGCCTAAG...CTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCATCTTAGGCAGAATTCCTaGGAAAAAGGTGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: QPAQIVILKFCCVPPPTHLRQNS*EKGAES
Trigger: TGACTCTGCACCTTTTTCTCAGGAATTCTGCCTAAG...ATGGGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCTCAAGGCTGTGCCTTTaGCATAGAAATACCTTACCC +
Preference number: 4 (lower is better)
Translates to: ETLGGCTSRDINPWMQCSSRLCL*HRNTLP
Trigger: GGGTAAGGTATTTCTATGTCAAAGGCACAGCCTTGA...GGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTGAGGCTGAACTCCTGTaGCCTTCCAACTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCEAELL*PSNSPG
Trigger: TCCAGGGGAGTTGGAAGGTCACAGGAGTTCAGCCTC...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325214.10
ENST00000417982.6
CDS-3UTR TCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCGGCCAGTGGATTGCTTaGGGTCAGGAGCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFGQWIA*GQELKA
Trigger: GGCCTTGAGCTCCTGACCTCAAGCAATCCACTGGCC...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572536.1
CDS-3UTR GCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCCAGGCCTCCCAGAACTaGTCCTCCGAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFQASQN*SSEKLP
Trigger: CGGAAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTG...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR GCA 90 bp AGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCCACAGTCTCTCCGTTaGATTCTTGTTCATAGAGTT +
Preference number: 4 (lower is better)
Translates to: SQPAQIVILKFCCVPPPTPQSLR*ILVHRV
Trigger: AACTCTATGAACAAGAATGCAACGGAGAGACTGTGG...GGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCGCTGAGGCATGGAGGTaGTCCGGGCCAGGATCACAT +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFAEAWR*SGPGSH
Trigger: ATGTGATCCTGGCCCGGAGCACCTCCATGCCTCAGC...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR GCA 90 bp CTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTAGGCTCTGCTTGTATTaGTTCACCCGGATCACCCCA +
Preference number: 4 (lower is better)
Translates to: LQKSQPAQIVILKFCCVPRLCLY*FTRITP
Trigger: TGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCT...AGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TTTGTTGTGTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCAGAGACATCAACCCATaGATGCAATGTTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: FVVSLRPPIPVKLHNGMIRDINP*MQCSQF
Trigger: GAACTGGGAACATTGCATCCATGGGTTGATGTCTCT...GATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGACACAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp CATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGTCCAGAGACATTGGGTaGTTGCACTTCCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: HKANGHWHVIQFGCTESQSRDIG*LHFQRH
Trigger: ATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGA...CTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTAGAGACACTTCCAGGTaGCACTTCCAGGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGRDTSR*HFQVAL
Trigger: AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCT...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCAGCCCCTCCCAAGCTaGAAGAAATCACAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGQPLPS*KKSQAA
Trigger: TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTG...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGAAAGGCAAATGGACATTaGCACGTCATCCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRKANGH*HVIQFG
Trigger: CCCAAACTGGATGACGTGCCAATGTCCATTTGCCTT...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCCCACGAGGAAAGACTTACTaGATTATCACCTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: KVSLVCPILNCRRRQPSPRGKTY*IITSNP
Trigger: GGGATTTGAGGTGATAATCCAGTAAGTCTTTCCTCG...TGGGCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTATAAATCCCATTCTGTaGCTTTACATCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: SGGCSSRDTSRWHFQVALINPIL*LYILNF
Trigger: GAAATTCAGGATGTAAAGCCACAGAATGGGATTTAT...AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp CAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCATAGGATACGTCTCTGTTaGACATGGGAAAAGGGTACT +
Preference number: 4 (lower is better)
Translates to: QPAQIVILKFCCVPPPTHRIRLC*TWEKGT
Trigger: AGTACCCTTTTCCCATGTCCAACAGAGACGTATCCT...ATGGGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR CCA 90 bp GTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCGTGTTCCCGTTAATGTTGAGCACTaGGCAAGACTTTTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: VPPPTHPRKIAQWNDRVPVNVEH*ARLFLN
Trigger: ATTTAGGAAAAGTCTTGCCCAGTGCTCAACATTAAC...GGGAACACGATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp GCAAAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCGAAAATGGTAAGGATTaGGGATCAAGGAGCAGGATA +
Preference number: 4 (lower is better)
Translates to: AKVSLVCPILNCRRRQPSENGKD*GSRSRI
Trigger: TATCCTGCTCCTTGATCCCCAATCCTTACCATTTTC...GCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp AAACAGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGAATAGGCTCCCTAACTaGATTTCAACAGAATGTTGT +
Preference number: 4 (lower is better)
Translates to: KQQGKAEQWWVLFQRHFQNRLPN*ISTECC
Trigger: ACAACATTCTGTTGAAATCCAGTTAGGGAGCCTATT...CTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR TCA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTGCAGCCGGTAGATGCTaGTGCCCGAGGTCTCCACTA +
Preference number: 4 (lower is better)
Translates to: RYPTLINPILWLYILNFCAAGRC*CPRSPL
Trigger: TAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGC...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAGCACCAGTTTGGGTGCACTaGAAGTCAGCTCTGAACGAA +
Preference number: 4 (lower is better)
Translates to: NMLRKDVVVCRPLKTETAPVWVH*KSALNE
Trigger: TTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGG...TGCTGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCCGGTCAGGCCTCTaGTACTTCTCCAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: KCGCHIMCPVRPLILLQMVRSGL*YFSKWS
Trigger: AGACCATTTGGAGAAGTATCAGAGGCCTGACCGGAC...CATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGACAGCCTTTCCCCCAGTaGCATATGGAAAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRQPFPQ*HMEKRN
Trigger: ATTTCTCTTTTCCATATGTCACTGGGGGAAAGGCTG...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCTGGTCAAGGCTGTGCCTTTaGCATAGAAATACCTTACCC +
Preference number: 4 (lower is better)
Translates to: GCHIMCPVRPLILLQMVWSRLCL*HRNTLP
Trigger: GGGTAAGGTATTTCTATGTCAAAGGCACAGCCTTGA...CCAGACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp GATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTCTTTGCTCCCCTTCTTaGCGTCACTCTCGATCGCCA +
Preference number: 4 (lower is better)
Translates to: DTCTHFSVSTKTQLLFSCLCSPS*RHSRSP
Trigger: TGGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAG...ACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR GCA 90 bp AAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCGAAGAAATCACAAGCTaGAAAAGAGCCAGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: KLQKSQPAQIVILKFCCVEEITS*KRASPP
Trigger: GGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTC...GACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTTTTGCTTTTGCTAGCTaGCACAGCCATCTTGACGCC +
Preference number: 4 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGFAFAS*HSHLDA
Trigger: GGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAA...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AAACAGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGTTTTTCACAAGGCTATaGACAAAGCATCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KQQGKAEQWWVLFQRHFQFFTRL*TKHLCF
Trigger: AAAGCAAAGATGCTTTGTGCATAGCCTTGTGAAAAA...CTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCCTTCCCGCTTGGTTCTaGTCTGATTGGCCGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFLPAWF*SDWPGV
Trigger: CACACCCGGCCAATCAGAGCAGAACCAAGCGGGAAG...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572536.1
CDS-3UTR GCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCCTTCCCGCTTGGTTCTaGTCTGATTCTTGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFLPAWF*SDSWRP
Trigger: GGGCCGCCAAGAATCAGAGCAGAACCAAGCGGGAAG...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR CCA 90 bp TTTGTTGTGTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCAGACATAGTCTCTGTTaGACATGGGAAAAGGGTACT +
Preference number: 4 (lower is better)
Translates to: FVVSLRPPIPVKLHNGMIRHSLC*TWEKGT
Trigger: AGTACCCTTTTCCCATGTCCAACAGAGACTATGTCT...GATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGACACAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000576183.5
CDS-3UTR CCA 90 bp GATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTAGCCAGGACGGAATTTaGCCACCCGGGTTATCGAAG +
Preference number: 4 (lower is better)
Translates to: DTCTHFSVSTKTQLLFSCSQDGI*PPGLSK
Trigger: CTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCT...ACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR CCA 90 bp CACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTAAGGCTGAACAGTGGTaGGTGCTCTTCCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: HKLQKSQPAQIVILKFCCKAEQW*VLFQRH
Trigger: GTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTT...ACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp GCAAAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCCGTAAAATTGCACAATaGAATGATCGTGTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: AKVSLVCPILNCRRRQPSRKIAQ*NDRVPY
Trigger: GTAGGGAACACGATCATTCCATTGTGCAATTTTACG...GCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATCAGCCCCTCCCAAGCTaGAAGAAATCACAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KTYWIITSNPSLISSTKHQPLPS*KKSQAA
Trigger: TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTG...ATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTAAGGAAGCAGACGAGTaGGCTGGATGTCAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCKEADE*AGCQAN
Trigger: GTTTGCCTGACATCCAGCTCACTCGTCTGCTTCCTT...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTGATCGTGTTCCCTACTaGAGACTTCCCCTCCTAATA +
Preference number: 4 (lower is better)
Translates to: LQKSQPAQIVILKFCCVPDRVPY*RLPLLI
Trigger: TATTAGGAGGGGAAGTCTTCAGTAGGGAACACGATC...AGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCTGGAATTGCACAATGGAATaGTCGTGTTCCCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: GCHIMCPVRPLILLQMVWNCTME*SCSLLK
Trigger: CTTCAGTAGGGAACACGATCATTCCATTGTGCAATT...CCAGACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGACTGAAAGTCAGCTCTaGACGAAATGCCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: MDDEEKCGCHIMCPVRPLTESQL*TKCHFQ
Trigger: CTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGT...CAGAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGCATCATAACAGCTACTaGTCCTCCACAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: TSNPSLISSTKHKANGHWHHNSY*SSTSRN
Trigger: GTTCCTACTTGTGGAGGATCAGTAGCTGTTATGATG...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGCAGCCTTTCCCCCAGTaGCATATGGAAAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: TSNPSLISSTKHKANGHWQPFPQ*HMEKRN
Trigger: ATTTCTCTTTTCCATATGTCACTGGGGGAAAGGCTG...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGGTAAAATGCAAAGCTTaGGAGGTACAGGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TSNPSLISSTKHKANGHWVKCKA*EVQAAF
Trigger: AAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTAC...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCAATTTTACCTGGCTGTaGACTGTTATCCCTTCTACA +
Preference number: 4 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPNFTWL*TVIPST
Trigger: TGTAGAAGGGATAACAGTTCACAGCCAGGTAAAATT...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CAGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCACAGTCTCTCCGTTaGATTCTTGTTCATAGAGTT +
Preference number: 4 (lower is better)
Translates to: QRHWVVALPETSTHGCNVPQSLR*ILVHRV
Trigger: AACTCTATGAACAAGAATGCAACGGAGAGACTGTGG...AACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCGATCGCCAGGCTCTaGTTGTATTGCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFSIARL*LYCFTR
Trigger: CCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGA...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR GCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCCTTTGCTCCCCTTCTTaGCGTCACTCTCGATCGCCA +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFLCSPS*RHSRSP
Trigger: TGGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAG...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR GCA 90 bp GGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCTGGACATCAACCCATGGATaGAATGTTCCCAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GCHIMCPVRPLILLQMVWTSTHG*NVPSSL
Trigger: AAGAGAACTGGGAACATTGCATCCATGGGTTGATGT...CCAGACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CCAGTTAATGAGCCAGGACGGAATTTGGCCACCCGGGTTATCGAAGTAATACATACATCAACCCATGGATaGAATGTTCCCAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PVNEPGRNLATRVIEVIHTSTHG*NVPSSL
Trigger: AAGAGAACTGGGAACATTGCATCCATGGGTTGATGT...ATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR GCA 90 bp CTCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTGAGACATTGGGTGGTTaGACTTCCAGAGACATCAAC +
Preference number: 4 (lower is better)
Translates to: LMDDEEKCGCHIMCPVRPETLGG*TSRDIN
Trigger: GTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC...AGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTGAGACATTGGGTGGTTaGACTTCCAGAGACATCAAC +
Preference number: 4 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGETLGG*TSRDIN
Trigger: GTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGGAAAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAATTTGCTTTTGCTAGCTaGCACAGCCATCTTGACGCC +
Preference number: 4 (lower is better)
Translates to: RKDLLDYHLKSQPNQLHKFAFAS*HSHLDA
Trigger: GGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAA...TTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTTTTGCTTTTGCTAGCTaGCACAGCCATCTTGACGCC +
Preference number: 4 (lower is better)
Translates to: HKLQKSQPAQIVILKFCCFAFAS*HSHLDA
Trigger: GGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAA...ACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp GAACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGTTTTTCACAAGGCTATaGACAAAGCATCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ERNATSSSPSQAGRNHKLFFTRL*TKHLCF
Trigger: AAAGCAAAGATGCTTTGTGCATAGCCTTGTGAAAAA...CAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCAGCCAGGACGGAATTTaGCCACCCGGGTTATCGAAG +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFSQDGI*PPGLSK
Trigger: CTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCT...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR CCA 90 bp CAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAAGAGACATCAACCCATaGATGCAATGTTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QSIRQMDIGTSSSLGALKRDINP*MQCSQF
Trigger: GAACTGGGAACATTGCATCCATGGGTTGATGTCTCT...TTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAGCAAAGGCAAATGGACATTaGCACGTCATCCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: NMLRKDVVVCRPLKTETAKANGH*HVIQFG
Trigger: CCCAAACTGGATGACGTGCCAATGTCCATTTGCCTT...TGCTGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp CTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTAAGGCAAATGGACATTaGCACGTCATCCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LQKSQPAQIVILKFCCVPKANGH*HVIQFG
Trigger: CCCAAACTGGATGACGTGCCAATGTCCATTTGCCTT...AGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp GACGCCTCAGTTTCCAGTAAAATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCTCACTCTTGATTCTTTaGGATGTGGCAGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: DASVSSKMQSLRGTGSLSSLLIL*DVAEGK
Trigger: TTTACCTTCTGCCACATCCCAAAGAATCAAGAGTGA...GGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACTGGAAACTGAGGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCTCTATGTCTTCACAGTaGTCACTCTTGATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPSMSSQ*SLLILW
Trigger: CCAAAGAATCAAGAGTGACCACTGTGAAGACATAGA...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTGGTTCTGCTCTGATTaGCCGGGTGTGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFWFCSD*PGVVAH
Trigger: ATGAGCCACCACACCCGGCCAATCAGAGCAGAACCA...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572536.1
CDS-3UTR CCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCTGAGCTTCCCGCTTaGTTCTGCTCTGATTGGCCG +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFSELPA*FCSDWP
Trigger: CGGCCAATCAGAGCAGAACCAAGCGGGAAGCTCAGA...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572536.1
CDS-3UTR TCA 90 bp AAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCTATCGAAGTAATACATaGAAACTTTGCTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KSQPAQIVILKFCCVPPPYRSNT*KLCSPS
Trigger: AGAAGGGGAGCAAAGTTTTCATGTATTACTTCGATA...GGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTACTGAAAGTCAGCTCTaGACGAAATGCCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: HKLQKSQPAQIVILKFCCTESQL*TKCHFQ
Trigger: CTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGT...ACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CAGTGGTCACTCTTGATTCTTTGGGATGTGGCAGAAGGTAAACAATGTTGGCTTCATCATAACAGCTACTaGTCCTCCACAAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: QWSLLILWDVAEGKQCWLHHNSY*SSTSRN
Trigger: GTTCCTACTTGTGGAGGATCAGTAGCTGTTATGATG...AAGCCAACATTGTTTACCTTCTGCCACATCCCAAAGAATCAAGAGTGACCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR TCA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTCAGCCTTTCCCCCAGTaGCATATGGAAAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGQPFPQ*HMEKRN
Trigger: ATTTCTCTTTTCCATATGTCACTGGGGGAAAGGCTG...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGGTAAAATGCAAAGCTTaGGAGGTACAGGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: MDDEEKCGCHIMCPVRPLVKCKA*EVQAAF
Trigger: AAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTAC...CAGAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GCAAACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACACTTAGGCAGAATTCCTaGGAAAAAGGTGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: ANMLRKDVVVCRPLKTETLRQNS*EKGAES
Trigger: TGACTCTGCACCTTTTTCTCAGGAATTCTGCCTAAG...TGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCAGGCTCTGCTTGTATTaGTTCACCCGGATCACCCCA +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFRLCLY*FTRITP
Trigger: TGGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCT...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR GCA 90 bp AAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACTCGATCGCCAGGCTCTaGTTGTATTGCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: KTNSLRYPTLINPILWLYSIARL*LYCFTR
Trigger: CCGGGTGAAGCAATACAAGCAGAGCCTGGCGATCGA...GTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACCTTTGCTCCCCTTCTTaGCGTCACTCTCGATCGCCA +
Preference number: 4 (lower is better)
Translates to: KTNSLRYPTLINPILWLYLCSPS*RHSRSP
Trigger: TGGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAG...GTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCACTCCAAAGTTGATGTaGTTTTTCACTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RDIGWLHFQRHQPMDAMFTPKLM*FFTLPR
Trigger: CCTTGGAAGAGTGAAAAAGCACATCAACTTTGGAGT...GAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp AAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGTCCAGAGACATTGGGTaGTTGCACTTCCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: KCGCHIMCPVRPLILLQMSRDIG*LHFQRH
Trigger: ATGTCTCTGGAAGTGCAACCACCCAATGTCTCTGGA...CATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCAGAGACACTTCCAGGTaGCACTTCCAGGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVRDTSR*HFQVAL
Trigger: AAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCT...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATGGGAAGGCTGAACAGTaGTGGGTGCTCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSQKENKQSEVSHINKSHGKAEQ*WVLFQR
Trigger: TCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCC...ATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGACGTAAAATTGCACAATaGAATGATCGTGTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRRKIAQ*NDRVPY
Trigger: GTAGGGAACACGATCATTCCATTGTGCAATTTTACG...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTCGTAAAATTGCACAATaGAATGATCGTGTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSRKIAQ*NDRVPY
Trigger: GTAGGGAACACGATCATTCCATTGTGCAATTTTACG...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGTATCGAAGTAATACATaGAAACTTTGCTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: HKANGHWHVIQFGCTESQYRSNT*KLCSPS
Trigger: AGAAGGGGAGCAAAGTTTTCATGTATTACTTCGATA...CTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GAGGTAGTTCTGACAGGCTCTTGCCATGTCTTTCAAGAAGTTAGGAACTCCATTAATTGCACAATGGAATaGTCGTGTTCCCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: EVVLTGSCHVFQEVRNSINCTME*SCSLLK
Trigger: CTTCAGTAGGGAACACGATCATTCCATTGTGCAATT...AATGGAGTTCCTAACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACTACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCCCAGTTTGGGTGCACTaGAAGTCAGCTCTGAACGAA +
Preference number: 4 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVPVWVH*KSALNE
Trigger: TTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGG...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCTTAGGCAGAATTCCTaGGAAAAAGGTGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: KLQKSQPAQIVILKFCCVLRQNS*EKGAES
Trigger: TGACTCTGCACCTTTTTCTCAGGAATTCTGCCTAAG...GACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp ATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGCCACAGTCTCTCCGTTaGATTCTTGTTCATAGAGTT +
Preference number: 4 (lower is better)
Translates to: MDDEEKCGCHIMCPVRPLPQSLR*ILVHRV
Trigger: AACTCTATGAACAAGAATGCAACGGAGAGACTGTGG...CAGAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CTCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTAAGGTTTCCCTAGTCTaGCCCATATTGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: LMDDEEKCGCHIMCPVRPKVSLV*PILNCR
Trigger: TCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT...AGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTAAGGTTTCCCTAGTCTaGCCCATATTGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: LQKSQPAQIVILKFCCVPKVSLV*PILNCR
Trigger: TCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT...AGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACGAAGAAATCACAAGCTaGAAAAGAGCCAGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: KTNSLRYPTLINPILWLYEEITS*KRASPP
Trigger: GGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTC...GTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGTTAGGAACTCCATTCTaGAAAGGAAATGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: TSNPSLISSTKHKANGHWLGTPF*KGNETV
Trigger: GACAGTCTCATTTCCTTTGCAGAATGGAGTTCCTAA...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp ATAACAGCTACTGATCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATAGCGCCACAAGCTTGTaGAAAGGATACGTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ITATDPPQVGTRKDLLDYSATSL*KGYVSV
Trigger: AACAGAGACGTATCCTTTCCACAAGCTTGTGGCGCT...ATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR CCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCTGAGCTTCCCGCTTaGTTCTGCTCTGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFSELPA*FCSDSW
Trigger: CCAAGAATCAGAGCAGAACCAAGCGGGAAGCTCAGA...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR TCA 90 bp AAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGTTTCTTAGGTTTTCTTaGGGTAGTTCTGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: KCGCHIMCPVRPLILLQMFLRFS*GSSDRL
Trigger: GAGCCTGTCAGAACTACCTCAAGAAAACCTAAGAAA...CATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCACTGAAAGTCAGCTCTaGACGAAATGCCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: TNSLRYPTLINPILWLYITESQL*TKCHFQ
Trigger: CTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGT...GATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp CTCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTAATTTTACCTGGCTGTaGACTGTTATCCCTTCTACA +
Preference number: 4 (lower is better)
Translates to: LMDDEEKCGCHIMCPVRPNFTWL*TVIPST
Trigger: TGTAGAAGGGATAACAGTTCACAGCCAGGTAAAATT...AGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATCCACAGTCTCTCCGTTaGATTCTTGTTCATAGAGTT +
Preference number: 4 (lower is better)
Translates to: KTYWIITSNPSLISSTKHPQSLR*ILVHRV
Trigger: AACTCTATGAACAAGAATGCAACGGAGAGACTGTGG...ATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGCGAGGAAAGACTTACTaGATTATCACCTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: KCGCHIMCPVRPLILLQMRGKTY*IITSNP
Trigger: GGGATTTGAGGTGATAATCCAGTAAGTCTTTCCTCG...CATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp CAGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTATAAATCCCATTCTGTaGCTTTACATCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: QRHWVVALPETSTHGCNVINPIL*LYILNF
Trigger: GAAATTCAGGATGTAAAGCCACAGAATGGGATTTAT...AACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCTCAAGGCTGTGCCTTTaGCATAGAAATACCTTACCC +
Preference number: 4 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVSRLCL*HRNTLP
Trigger: GGGTAAGGTATTTCTATGTCAAAGGCACAGCCTTGA...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp ACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTCTTCCACAGTCTCTCCGTTaGATTCTTGTTCATAGAGTT +
Preference number: 4 (lower is better)
Translates to: TCTHFSVSTKTQLLFSCLPQSLR*ILVHRV
Trigger: AACTCTATGAACAAGAATGCAACGGAGAGACTGTGG...AAGACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR GCA 90 bp TTTCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCGAGACATTGGGTGGTTaGACTTCCAGAGACATCAAC +
Preference number: 4 (lower is better)
Translates to: FLPRKKTNSLRYPTLINPETLGG*TSRDIN
Trigger: GTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC...GGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGTTTTTCACAAGGCTATaGACAAAGCATCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: TSNPSLISSTKHKANGHWFFTRL*TKHLCF
Trigger: AAAGCAAAGATGCTTTGTGCATAGCCTTGTGAAAAA...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp AGGACAAAAGTAAGACCAGTCAACAGGAACTTCTGTTGCAAAAAGGCCTTATATAGAGACATCAACCCATaGATGCAATGTTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RTKVRPVNRNFCCKKALYRDINP*MQCSQF
Trigger: GAACTGGGAACATTGCATCCATGGGTTGATGTCTCT...ATATAAGGCCTTTTTGCAACAGAAGTTCCTGTTGACTGGTCTTACTTTTGTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CCA 90 bp TTTCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCAAGGCAAATGGACATTaGCACGTCATCCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FLPRKKTNSLRYPTLINPKANGH*HVIQFG
Trigger: CCCAAACTGGATGACGTGCCAATGTCCATTTGCCTT...GGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp ATAACAGCTACTGATCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATCGAGGAAAGACTTACTaGATTATCACCTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: ITATDPPQVGTRKDLLDYRGKTY*IITSNP
Trigger: GGGATTTGAGGTGATAATCCAGTAAGTCTTTCCTCG...ATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp TTTCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCCAGCCTTTCCCCCAGTaGCATATGGAAAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: FLPRKKTNSLRYPTLINPQPFPQ*HMEKRN
Trigger: ATTTCTCTTTTCCATATGTCACTGGGGGAAAGGCTG...GGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ATAACAGCTACTGATCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATAATTTTACCTGGCTGTaGACTGTTATCCCTTCTACA +
Preference number: 4 (lower is better)
Translates to: ITATDPPQVGTRKDLLDYNFTWL*TVIPST
Trigger: TGTAGAAGGGATAACAGTTCACAGCCAGGTAAAATT...ATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTTCAAGGCTGTGCCTTTaGCATAGAAATACCTTACCC +
Preference number: 4 (lower is better)
Translates to: RYPTLINPILWLYILNFCSRLCL*HRNTLP
Trigger: GGGTAAGGTATTTCTATGTCAAAGGCACAGCCTTGA...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp CTCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTAACAGGAACTTCTGTTaGAAAAAGGCCTTATATGTT +
Preference number: 4 (lower is better)
Translates to: LMDDEEKCGCHIMCPVRPNRNFC*KKALYV
Trigger: AACATATAAGGCCTTTTTGCAACAGAAGTTCCTGTT...AGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR GCA 90 bp GATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTTTCCACTCAATCTATTaGAGAATGTTTGGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: DTCTHFSVSTKTQLLFSCFHSIY*RMFGFA
Trigger: GGCAAACCCAAACATTCTGCAATAGATTGAGTGGAA...ACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR TCA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTTTTCTTAGGTTTTCTTaGGGTAGTTCTGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: RYPTLINPILWLYILNFCFLRFS*GSSDRL
Trigger: GAGCCTGTCAGAACTACCTCAAGAAAACCTAAGAAA...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp ACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCATTAAAATTTTTCCCTaGGATCATCAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TNSLRYPTLINPILWLYIIKIFP*DHQGCA
Trigger: GGCACAGCCTTGATGATCTCAGGGAAAAATTTTAAT...GATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACAAGGTTTCCCTAGTCTaGCCCATATTGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: KTNSLRYPTLINPILWLYKVSLV*PILNCR
Trigger: TCTACAGTTCAATATGGGGCAGACTAGGGAAACCTT...GTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTTCCACTCAATCTATTaGAGAATGTTTGGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFFHSIY*RMFGFA
Trigger: GGCAAACCCAAACATTCTGCAATAGATTGAGTGGAA...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR CCA 90 bp AGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTGAATTTCTGTCGAGGAAAGACTTACTaGATTATCACCTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: RYPTLINPILWLYILNFCRGKTY*IITSNP
Trigger: GGGATTTGAGGTGATAATCCAGTAAGTCTTTCCTCG...ACAGAAATTCAGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCTTTGTTTTCTGTAATCTaGGTCCATATAGATGTCTGC +
Preference number: 4 (lower is better)
Translates to: KQSEVSHINKSHSVALHPLFSVI*VHIDVC
Trigger: GCAGACATCTATATGGACTCAGATTACAGAAAACAA...AGGATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR TCA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTATCGAAGTAATACATaGAAACTTTGCTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFYRSNT*KLCSPS
Trigger: AGAAGGGGAGCAAAGTTTTCATGTATTACTTCGATA...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR TCA 90 bp AGGACAAAAGTAAGACCAGTCAACAGGAACTTCTGTTGCAAAAAGGCCTTATATTATCGAAGTAATACATaGAAACTTTGCTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RTKVRPVNRNFCCKKALYYRSNT*KLCSPS
Trigger: AGAAGGGGAGCAAAGTTTTCATGTATTACTTCGATA...ATATAAGGCCTTTTTGCAACAGAAGTTCCTGTTGACTGGTCTTACTTTTGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR TCA 90 bp TTTCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTAAAATTTTTCCCTaGGATCATCAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FLPRKKTNSLRYPTLINPIKIFP*DHQGCA
Trigger: GGCACAGCCTTGATGATCTCAGGGAAAAATTTTAAT...GGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR GCA 90 bp ATAACAGCTACTGATCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATTTTTTCACAAGGCTATaGACAAAGCATCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ITATDPPQVGTRKDLLDYFFTRL*TKHLCF
Trigger: AAAGCAAAGATGCTTTGTGCATAGCCTTGTGAAAAA...ATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATATAAATCCCATTCTGTaGCTTTACATCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: SSQKENKQSEVSHINKSHINPIL*LYILNF
Trigger: GAAATTCAGGATGTAAAGCCACAGAATGGGATTTAT...ATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CCA 90 bp TTTCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATAAATCCCATTCTGTaGCTTTACATCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: FLPRKKTNSLRYPTLINPINPIL*LYILNF
Trigger: GAAATTCAGGATGTAAAGCCACAGAATGGGATTTAT...GGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS GCA 90 bp GAGGTCTCCACTAGGAGCTGCCAGTCGGCCCCGGCCAGAGCGGGCTaGTGGAGCTCGGCGCAGGCCTCCCAGAACTGCTCCTCCGAGAAG +
Preference number: 5 (lower is better)
Translates to: EVSTRSCQSAPARAG*WSSAQASQNCSSEK
Trigger: CTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000573500.5
ENST00000576183.5
CDS CCA 90 bp GTCTCCACTAGGAGCTGCCAGTCGGCCCCGGCCAGAGCGGGCTGCTaGAGCTCGGCGCAGGCCTCCCAGAACTGCTCCTCCGAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: VSTRSCQSAPARAGC*SSAQASQNCSSEKL
Trigger: AAGCTTCTCGGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000573500.5
ENST00000576183.5
CDS TCA 90 bp CCTCCAGCGGGTTGGCCGCTACCTTGTCCAGCAGCCGGTAGATGCTaGTGCCCGAGGTCTCCACTAGGAGCTGCCAGTCGGCCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: PPAGWPLPCPAAGRC*CPRSPLGAASRPRP
Trigger: TGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGTAGCGGCCAACCCGCTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS TCA 90 bp ACGGCAGTCACTTGGAGGCACCGCCCCTGCGCTAGCTCCAGAGCTTaGGACAGGGTCCGGGCGGAGCTCCTTCCTGAGCCGGAGAAGACG +
Preference number: 5 (lower is better)
Translates to: TAVTWRHRPCASSRA*DRVRAELLPEPEKT
Trigger: CGTCTTCTCCGGCTCAGGAAGGAGCTCCGCCCGGACCCTGTCTCAAGCTCTGGAGCTAGCGCAGGGGCGGTGCCTCCAAGTGACTGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR CAA 90 bp AGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAA +
Preference number: 5 (lower is better)
Translates to: SRGRLNSGGCSSRDTSRWEPGRN*ATRVIE
Trigger: TTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTC...CCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS TCA 90 bp TATACTCATAAAGTCCAGTCTTCTTGTCCAGCAGCCGGTAGATGCTaGTGCCCGAGGTCTCCACTAGGAGCTGCCAGTCGGCCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: YTHKVQSSCPAAGRC*CPRSPLGAASRPRP
Trigger: TGGCCGGGGCCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGAAGACTGGACTTTATGAGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000573500.5
ENST00000576183.5
CDS-3UTR CAA 90 bp TCTGCTTGTATTGCTTCACCCGGATCACCCCAGACCTCTCGCCAAGCTGAGGCAACTTTGCTCCCCTTCTaGCCGTCACTCTCGATCGCC +
Preference number: 5 (lower is better)
Translates to: SACIASPGSPQTSRQAEATLLPF*PSLSIA
Trigger: GGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAGT...TGCCTCAGCTTGGCGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR CAA 90 bp AGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCGCTGCCACAGCCATCTaGACGCCTCAGTTTCCAGTA +
Preference number: 5 (lower is better)
Translates to: SSPSQAGRNHKLQKSQPAAATAI*TPQFPV
Trigger: TACTGGAAACTGAGGCGTCAAGATGGCTGTGGCAGC...GGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGGCTGCCACAGCCATCTaGACGCCTCAGTTTCCAGTA +
Preference number: 5 (lower is better)
Translates to: SRGRLNSGGCSSRDTSRWAATAI*TPQFPV
Trigger: TACTGGAAACTGAGGCGTCAAGATGGCTGTGGCAGC...CCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCTGCACGGCAGTCACTaGGAGGCACCGCCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: RDIGWLHFQRHQPMDAMFLHGSH*EAPPLR
Trigger: GCGCAGGGGCGGTGCCTCCAAGTGACTGCCGTGCAG...GAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325214.10
ENST00000417982.6
CDS-3UTR CAA 90 bp AAACAGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGACTTTGCTCCCCTTCTaGCCGTCACTCTCGATCGCC +
Preference number: 5 (lower is better)
Translates to: KQQGKAEQWWVLFQRHFQTLLPF*PSLSIA
Trigger: GGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAGT...CTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AGGATCACATGGATCTTCCTCCCTTCCATGTCCAGGTCTCGCCGCTGCCGAAGGGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: RITWIFLPSMSRSRRCRRALPET*GGCTSR
Trigger: TCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGC...CCTTCGGCAGCGGCGAGACCTGGACATGGAAGGGAGGAAGATCCATGTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR CAA 90 bp GAACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCTGCAGTTCCCTCCCTaGGCGGCCCAGTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: ERNATSSSPSQAGRNHKLLQFPP*AAQLMS
Trigger: GCTCATTAACTGGGCCGCCAAGGGAGGGAACTGCAG...CAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CAA 90 bp AGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGGTGGTTAGGAACTCCATTCTaGGCGGCCCAGTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: SRGRLNSGGCSSRDTSRWLGTPF*AAQLMS
Trigger: GCTCATTAACTGGGCCGCCAAGAATGGAGTTCCTAA...CCACCTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
CDS-3UTR CAA 90 bp CTCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGCACGGCAGTCACTaGGAGGCACCGCCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: LMDDEEKCGCHIMCPVRPLHGSH*EAPPLR
Trigger: GCGCAGGGGCGGTGCCTCCAAGTGACTGCCGTGCAG...AGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325214.10
ENST00000417982.6
CDS-3UTR CAA 90 bp TCTGCTTGTATTGCTTCACCCGGATCACCCCAGACCTCTCGCCAAGCTGAGGCAGAAAGCGCCACAAGCTaGTGGAAAGGATACGTCTCT +
Preference number: 5 (lower is better)
Translates to: SACIASPGSPQTSRQAEAESATS*WKGYVS
Trigger: AGAGACGTATCCTTTCCACAAGCTTGTGGCGCTTTC...TGCCTCAGCTTGGCGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS CCA 90 bp GCAGAGTCTATGTCACATGACTGTATCTTGGCTGCAAGGGAGGCCTaGACAGACAGTGTCTGGCTGTTCCCTTGGATAGGTAAGCATCCC +
Preference number: 5 (lower is better)
Translates to: AESMSHDCILAAREA*TDSVWLFPWIGKHP
Trigger: GGGATGCTTACCTATCCAAGGGAACAGCCAGACACTGTCTGTCCAGGCCTCCCTTGCAGCCAAGATACAGTCATGTGACATAGACTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS-3UTR CAA 90 bp CAGGTGGCACTTCCAGGTGGCACTTCCAGAGACATTGGGTGGTTGCACTTCCAGCTAGTCTGCCCCATATaGAACTGTAGAAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: QVALPGGTSRDIGWLHFQLVCPI*NCRRRQ
Trigger: CTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAG...CTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGCCACCTGGAAGTGCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GACGCCTCAGTTTCCAGTAAAATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCATCGCCAGGCTCTGCTaGTATTGCTTCACCCGGATC +
Preference number: 5 (lower is better)
Translates to: DASVSSKMQSLRGTGSLSIARLC*YCFTRI
Trigger: GATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGAT...GGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACTGGAAACTGAGGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp ACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCATTAGGAACTCCATTCTaGGCGGCCCAGTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: TKCHFQQPLPSWKKSQAALGTPF*AAQLMS
Trigger: GCTCATTAACTGGGCCGCCAAGAATGGAGTTCCTAA...TGCAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
CDS-3UTR CAA 90 bp CATGGATCTTCCTCCCTTCCATGTCCAGGTCTCGCCGCTGCCGAAGGTAGACATAGTTCTGACAGGCTCTaGCCATGTCTTTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: HGSSSLPCPGLAAAEGRHSSDRL*PCLSRS
Trigger: ACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACT...ATGTCTACCTTCGGCAGCGGCGAGACCTGGACATGGAAGGGAGGAAGATCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR CAA 90 bp TCCAGTTTGGGTGCACTGAAAGTCAGCTCTGAACGAAATGCCACTTCCAGCAGCGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SSLGALKVSSERNATSSSALPET*GGCTSR
Trigger: TCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGC...GCTGCTGGAAGTGGCATTTCGTTCAGAGCTGACTTTCAGTGCACCCAAACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCATGGCACGTCATCCAGTTaGGGTGCACTGAAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: QPAQIVILKFCCVPPPTHGTSSS*GALKVS
Trigger: GCTGACTTTCAGTGCACCCAAACTGGATGACGTGCC...ATGGGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp TGGGTGCTCTTCCAGAGACACTTCCAGGTGGCACTTCCAGGTGGCACTTCCAGAAGTAAAATGCAAAGCTaGAGAGGTACAGGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: WVLFQRHFQVALPGGTSRSKMQS*RGTGSL
Trigger: AAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACT...TCTGGAAGTGCCACCTGGAAGTGCCACCTGGAAGTGTCTCTGGAAGAGCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCATGCTGCCACAGCCATCTaGACGCCTCAGTTTCCAGTA +
Preference number: 5 (lower is better)
Translates to: QPAQIVILKFCCVPPPTHAATAI*TPQFPV
Trigger: TACTGGAAACTGAGGCGTCAAGATGGCTGTGGCAGC...ATGGGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AAACAGCAGGGGAAGGCTGAACAGTGGTGGGTGCTCTTCCAGAGACACTTCCAGAAAGCATCTTTGCTTTaGCTAGCTGCCACAGCCATC +
Preference number: 5 (lower is better)
Translates to: KQQGKAEQWWVLFQRHFQKASLL*LAATAI
Trigger: GATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTT...CTGGAAGTGTCTCTGGAAGAGCACCCACCACTGTTCAGCCTTCCCCTGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTCGGTCCTCCAGCGGGTaGGCCGCTACCTTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCRSSSG*AATLSS
Trigger: GCTGGACAAGGTAGCGGCCAACCCGCTGGAGGACCG...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS CCA 90 bp GGAAAGCGCCACAAGCTTGTGGAAAGGATACGTCTCTGTTGGACATaGGAAAAGGGTACTTCACTTCCCAGTAGACCACAGTCTCTCCGT +
Preference number: 5 (lower is better)
Translates to: GKRHKLVERIRLCWT*EKGTSLPSRPQSLR
Trigger: ACGGAGAGACTGTGGTCTACTGGGAAGTGAAGTACCCTTTTCCCATGTCCAACAGAGACGTATCCTTTCCACAAGCTTGTGGCGCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS CCA 90 bp ACATGTGGGTCTTATTGGCAGAGTCTATGTCACATGACTGTATCTTaGCTGCAAGGGAGGCCTGGACAGACAGTGTCTGGCTGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: TCGSYWQSLCHMTVS*LQGRPGQTVSGCSL
Trigger: AAGGGAACAGCCAGACACTGTCTGTCCAGGCCTCCCTTGCAGCCAAGATACAGTCATGTGACATAGACTCTGCCAATAAGACCCACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS-3UTR CAA 90 bp CTTCCAAGGAATCTGTTGAGCTCTCTAGTAGTAGATCTTGTGCAAAGCAGGCTGCAGGCTCTGCTTGTATaGCTTCACCCGGATCACCCC +
Preference number: 5 (lower is better)
Translates to: LPRNLLSSLVVDLVQSRLQALLV*LHPDHP
Trigger: GGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTG...CAGCCTGCTTTGCACAAGATCTACTACTAGAGAGCTCAACAGATTCCTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CAA 90 bp CAGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTATCGCCAGGCTCTGCTaGTATTGCTTCACCCGGATC +
Preference number: 5 (lower is better)
Translates to: QRHWVVALPETSTHGCNVIARLC*YCFTRI
Trigger: GATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGAT...AACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp ACCTCAAATCCCAGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGACTTTGCTCCCCTTCTaGCCGTCACTCTCGATCGCC +
Preference number: 5 (lower is better)
Translates to: TSNPSLISSTKHKANGHWTLLPF*PSLSIA
Trigger: GGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAGT...CCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCTGGGATTTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AAAATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAA +
Preference number: 5 (lower is better)
Translates to: KMQSLRGTGSLSPSDIWKEPGRN*ATRVIE
Trigger: TTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTC...TTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCGTGTTCCCAGTTCTGACAGGCTCTaGCCATGTCTTTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: VPPPTHPRKIAQWNDRVPSSDRL*PCLSRS
Trigger: ACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACT...GGGAACACGATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCGTGTTCCCAGTAAAATGCAAAGCTaGAGAGGTACAGGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: VPPPTHPRKIAQWNDRVPSKMQS*RGTGSL
Trigger: AAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACT...GGGAACACGATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GTCCCTCCGCCCACCCATCCCCGTAAAATTGCACAATGGAATGATCGTGTTCCCATGCACAAAGCATCTTaGCTTTTGCTAGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: VPPPTHPRKIAQWNDRVPMHKAS*LLLAAT
Trigger: TGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT...GGGAACACGATCATTCCATTGTGCAATTTTACGGGGATGGGTGGGCGGAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AGCTGGAAGAAATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTGTCTGCCAGTAGAGTaGGTGAGCAGTCCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SWKKSQAAKEPARPNSHSCLPVE*VSSPPE
Trigger: TTCTGGAGGACTGCTCACCAACTCTACTGGCAGACA...AGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATTTCTTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCAGGCTCTGCTTGTATaGCTTCACCCGGATCACCCC +
Preference number: 5 (lower is better)
Translates to: LQKSQPAQIVILKFCCVPQALLV*LHPDHP
Trigger: GGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTG...AGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAA +
Preference number: 5 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGEPGRN*ATRVIE
Trigger: TTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTC...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAGCAGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAA +
Preference number: 5 (lower is better)
Translates to: NMLRKDVVVCRPLKTETAEPGRN*ATRVIE
Trigger: TTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTC...TGCTGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCTTAGGAACTCCATTCTaGGCGGCCCAGTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: ETLGGCTSRDINPWMQCSLGTPF*AAQLMS
Trigger: GCTCATTAACTGGGCCGCCAAGAATGGAGTTCCTAA...GGAACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
CDS-3UTR CAA 90 bp AGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCTAGTCTGCCCCATATaGAACTGTAGAAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: SQPAQIVILKFCCVPPPTLVCPI*NCRRRQ
Trigger: CTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAG...GGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS TCA 90 bp AAATTGAAGCCACATGTGGGTCTTATTGGCAGAGTCTATGTCACATaGCTGTATCTTGGCTGCAAGGGAGGCCTGGACAGACAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: KLKPHVGLIGRVYVT*LYLGCKGGLDRQCL
Trigger: CAGACACTGTCTGTCCAGGCCTCCCTTGCAGCCAAGATACAGTCATGTGACATAGACTCTGCCAATAAGACCCACATGTGGCTTCAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CCA 90 bp ACAGAAGGAAAGCGCCACAAGCTTGTGGAAAGGATACGTCTCTGTTaGACATGGGAAAAGGGTACTTCACTTCCCAGTAGACCACAGTCT +
Preference number: 5 (lower is better)
Translates to: TEGKRHKLVERIRLC*TWEKGTSLPSRPQS
Trigger: AGACTGTGGTCTACTGGGAAGTGAAGTACCCTTTTCCCATGTCCAACAGAGACGTATCCTTTCCACAAGCTTGTGGCGCTTTCCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS-3UTR CAA 90 bp AGGAAAGACTTACTGGATTATCACCTCAAATCCCAGCCTAATCAGCTCCACAAACAGGCTCTGCTTGTATaGCTTCACCCGGATCACCCC +
Preference number: 5 (lower is better)
Translates to: RKDLLDYHLKSQPNQLHKQALLV*LHPDHP
Trigger: GGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTG...TTTGTGGAGCTGATTAGGCTGGGATTTGAGGTGATAATCCAGTAAGTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GAGGTAGTTCTGACAGGCTCTTGCCATGTCTTTCAAGAAGTTAGGAACTCCATTATCGCCAGGCTCTGCTaGTATTGCTTCACCCGGATC +
Preference number: 5 (lower is better)
Translates to: EVVLTGSCHVFQEVRNSIIARLC*YCFTRI
Trigger: GATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGAT...AATGGAGTTCCTAACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp ATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGATACTTCTCCAAATGGTGGCACGTCATCCAGTTaGGGTGCACTGAAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: MWLSYYVSGQASDTSPNGGTSSS*GALKVS
Trigger: GCTGACTTTCAGTGCACCCAAACTGGATGACGTGCC...ACCATTTGGAGAAGTATCAGAGGCCTGACCGGACACATAATATGACAACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTGGCACGTCATCCAGTTaGGGTGCACTGAAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LQKSQPAQIVILKFCCVPGTSSS*GALKVS
Trigger: GCTGACTTTCAGTGCACCCAAACTGGATGACGTGCC...AGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GCAAAGGTTTCCCTAGTCTGCCCCATATTGAACTGTAGAAGAAGGCAGCCCAGCAGTAAAATGCAAAGCTaGAGAGGTACAGGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: AKVSLVCPILNCRRRQPSSKMQS*RGTGSL
Trigger: AAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACT...GCTGGGCTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAGGGAAACCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GCAAACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAGCTGCCACAGCCATCTaGACGCCTCAGTTTCCAGTA +
Preference number: 5 (lower is better)
Translates to: ANMLRKDVVVCRPLKTETAATAI*TPQFPV
Trigger: TACTGGAAACTGAGGCGTCAAGATGGCTGTGGCAGC...TGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp ATGCACAAAGCATCTTTGCTTTTGCTAGCTGCCACAGCCATCTTGACGCCTCAGAAAGCATCTTTGCTTTaGCTAGCTGCCACAGCCATC +
Preference number: 5 (lower is better)
Translates to: MHKASLLLLAATAILTPQKASLL*LAATAI
Trigger: GATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTT...CTGAGGCGTCAAGATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCCATAAGGATACGTCTCTGTaGGACATGGGAAAAGGGTAC +
Preference number: 5 (lower is better)
Translates to: QPAQIVILKFCCVPPPTHKDTSL*DMGKGY
Trigger: GTACCCTTTTCCCATGTCCAACAGAGACGTATCCTT...ATGGGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS TCA 90 bp ACCTCAAGATTGTTCCAGCAAAGCCTAACTGCTGCTTCCACTGGATaGGAACCCAGAGTGAAAGCTGTTGATGTTGGGGAGCAAACATCA +
Preference number: 5 (lower is better)
Translates to: TSRLFQQSLTAASTG*EPRVKAVDVGEQTS
Trigger: TGATGTTTGCTCCCCAACATCAACAGCTTTCACTCTGGGTTCTCATCCAGTGGAAGCAGCAGTTAGGCTTTGCTGGAACAATCTTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS-3UTR CAA 90 bp GAACGAAATGCCACTTCCAGCAGCCCCTCCCAAGCTGGAAGAAATCACAAGCTGCTCTCCGTTGCATTCTaGTTCATAGAGTTCTTTAAC +
Preference number: 5 (lower is better)
Translates to: ERNATSSSPSQAGRNHKLLSVAF*FIEFFN
Trigger: GTTAAAGAACTCTATGAACAAGAATGCAACGGAGAG...CAGCTTGTGATTTCTTCCAGCTTGGGAGGGGCTGCTGGAAGTGGCATTTCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTCAGGCTCTGCTTGTATaGCTTCACCCGGATCACCCC +
Preference number: 5 (lower is better)
Translates to: DTCTHFSVSTKTQLLFSCQALLV*LHPDHP
Trigger: GGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTG...ACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR CAA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTACTTTGCTCCCCTTCTaGCCGTCACTCTCGATCGCC +
Preference number: 5 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCTLLPF*PSLSIA
Trigger: GGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAGT...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTCATGTGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAA +
Preference number: 5 (lower is better)
Translates to: DTCTHFSVSTKTQLLFSCEPGRN*ATRVIE
Trigger: TTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTC...ACATGAGAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR CAA 90 bp ATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCTGGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: MDDEEKCGCHIMCPVRPLALPET*GGCTSR
Trigger: TCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGC...CAGAGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGCTAGTCTGCCCCATATaGAACTGTAGAAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: SLISSTKHKANGHWHVIQLVCPI*NCRRRQ
Trigger: CTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAG...CTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp ATGCAAAGCTTGAGAGGTACAGGCAGCCTTTCCCCCAGTGACATATGGAAAAGACTAGTCTGCCCCATATaGAACTGTAGAAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: MQSLRGTGSLSPSDIWKRLVCPI*NCRRRQ
Trigger: CTGCCTTCTTCTACAGTTCAATATGGGGCAGACTAG...TCTTTTCCATATGTCACTGGGGGAAAGGCTGCCTGTACCTCTCAAGCTTTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CAGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTCCCATCCCCGTAAAATaGCACAATGGAATGATCGTG +
Preference number: 5 (lower is better)
Translates to: QRHWVVALPETSTHGCNVPIPVK*HNGMIV
Trigger: CACGATCATTCCATTGTGCAATTTTACGGGGATGGG...AACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGAAAGCATCTTTGCTTTaGCTAGCTGCCACAGCCATC +
Preference number: 5 (lower is better)
Translates to: HKANGHWHVIQFGCTESQKASLL*LAATAI
Trigger: GATGGCTGTGGCAGCTAGCAAAAGCAAAGATGCTTT...CTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCAGCTCAAGGCCAGCCTaGGCGGCCCAGTTAATGAGC +
Preference number: 5 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFSSRPA*AAQLMS
Trigger: GCTCATTAACTGGGCCGCCAAGGCTGGCCTTGAGCT...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572536.1
CDS TCA 90 bp ACTCAGCAGTTGTTTTCCCTAAAGTCAGATGCCATCACTGGTCACTaGAAAATGGATCTTCCATGCTGCCTGCTTCCTCACATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: TQQLFSLKSDAITGH*KMDLPCCLLPHMAL
Trigger: AAGAGCCATGTGAGGAAGCAGGCAGCATGGAAGATCCATTTTTCAGTGACCAGTGATGGCATCTGACTTTAGGGAAAACAACTGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CCA 90 bp CTGGTCACTGAAAAATGGATCTTCCATGCTGCCTGCTTCCTCACATaGCTCTTTTCCAAATTGAAGCCACATGTGGGTCTTATTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LVTEKWIFHAACFLT*LFSKLKPHVGLIGR
Trigger: TCTGCCAATAAGACCCACATGTGGCTTCAATTTGGAAAAGAGCCATGTGAGGAAGCAGGCAGCATGGAAGATCCATTTTTCAGTGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS-3UTR CAA 90 bp AAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCTGTCTGCCAGTAGAGTaGGTGAGCAGTCCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: KLQKSQPAQIVILKFCCVCLPVE*VSSPPE
Trigger: TTCTGGAGGACTGCTCACCAACTCTACTGGCAGACA...GACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCCAGGCTCTGCTTGTATaGCTTCACCCGGATCACCCC +
Preference number: 5 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFQALLV*LHPDHP
Trigger: GGGGTGATCCGGGTGAAGCAATACAAGCAGAGCCTG...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR CAA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCACTTTGCTCCCCTTCTaGCCGTCACTCTCGATCGCC +
Preference number: 5 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFTLLPF*PSLSIA
Trigger: GGCGATCGAGAGTGACGGCAAGAAGGGGAGCAAAGT...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR CAA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAA +
Preference number: 5 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFEPGRN*ATRVIE
Trigger: TTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTC...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR CAA 90 bp AGCCTAATCAGCTCCACAAAGCATAAGGCAAATGGACATTGGCACGTCATCCAGAGTTCTGACAGGCTCTaGCCATGTCTTTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: SLISSTKHKANGHWHVIQSSDRL*PCLSRS
Trigger: ACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACT...CTGGATGACGTGCCAATGTCCATTTGCCTTATGCTTTGTGGAGCTGATTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CAGAGACATTGGGTGGTTGCACTTCCAGAGACATCAACCCATGGATGCAATGTTATGCACAAAGCATCTTaGCTTTTGCTAGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: QRHWVVALPETSTHGCNVMHKAS*LLLAAT
Trigger: TGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT...AACATTGCATCCATGGGTTGATGTCTCTGGAAGTGCAACCACCCAATGTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CATAAGGCAAATGGACATTGGCACGTCATCCAGTTTGGGTGCACTGAAAGTCAGACACAAGAAATGGGCTaGGGCTGGATTGTTACATTC +
Preference number: 5 (lower is better)
Translates to: HKANGHWHVIQFGCTESQTQEMG*GWIVTF
Trigger: GAATGTAACAATCCAGCCCAAGCCCATTTCTTGTGT...CTGACTTTCAGTGCACCCAAACTGGATGACGTGCCAATGTCCATTTGCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CAA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCAGGCCAGTGGATTGCTaGAGGTCAGGAGCTCAAGGC +
Preference number: 5 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFRPVDC*RSGAQG
Trigger: GCCTTGAGCTCCTGACCTCAAGCAATCCACTGGCCT...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572536.1
CDS-3UTR CAA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCATCGCCAGGCTCTGCTaGTATTGCTTCACCCGGATC +
Preference number: 5 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFIARLC*YCFTRI
Trigger: GATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGAT...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR CAA 90 bp ATAACAGCTACTGATCCTCCACAAGTAGGAACGAGGAAAGACTTACTGGATTATGCACTTCCAGAGACATaGGGTGGTTGCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: ITATDPPQVGTRKDLLDYALPET*GGCTSR
Trigger: TCTGGAAGTGCAACCACCCAATGTCTCTGGAAGTGC...ATAATCCAGTAAGTCTTTCCTCGTTCCTACTTGTGGAGGATCAGTAGCTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CTCATGGATGATGAGGAAAAATGTGGTTGTCATATTATGTGTCCGGTCAGGCCTCCCATCCCCGTAAAATaGCACAATGGAATGATCGTG +
Preference number: 5 (lower is better)
Translates to: LMDDEEKCGCHIMCPVRPPIPVK*HNGMIV
Trigger: CACGATCATTCCATTGTGCAATTTTACGGGGATGGG...AGGCCTGACCGGACACATAATATGACAACCACATTTTTCCTCATCATCCATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTGTCCCTCCGCCCACCTGTTTGACTCCAAAGTaGATGTGCTTTTTCACTCTT +
Preference number: 5 (lower is better)
Translates to: SQPAQIVILKFCCVPPPTCLTPK*MCFFTL
Trigger: AAGAGTGAAAAAGCACATCAACTTTGGAGTCAAACA...GGTGGGCGGAGGGACACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS GCA 90 bp TCCTTCCTCTTCCTTCCACTCAATCTATTGCAGAATGTTTGGGTTTaGCAAAAACTTGATGAGGTCTCTCTGATTCTGAGCTTCCCGCTT +
Preference number: 5 (lower is better)
Translates to: SFLFLPLNLLQNVWV*QKLDEVSLILSFPL
Trigger: AAGCGGGAAGCTCAGAATCAGAGAGACCTCATCAAGTTTTTGGCAAACCCAAACATTCTGCAATAGATTGAGTGGAAGGAAGAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572536.1
ENST00000573500.5
ENST00000576221.1
CDS-3UTR CAA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCTGTCTGCCAGTAGAGTaGGTGAGCAGTCCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVCLPVE*VSSPPE
Trigger: TTCTGGAGGACTGCTCACCAACTCTACTGGCAGACA...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCTGTCTGCCAGTAGAGTaGGTGAGCAGTCCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFCLPVE*VSSPPE
Trigger: TTCTGGAGGACTGCTCACCAACTCTACTGGCAGACA...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS-3UTR CAA 90 bp TCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATATCGCCAGGCTCTGCTaGTATTGCTTCACCCGGATC +
Preference number: 5 (lower is better)
Translates to: SSQKENKQSEVSHINKSHIARLC*YCFTRI
Trigger: GATCCGGGTGAAGCAATACAAGCAGAGCCTGGCGAT...ATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACGGCACGTCATCCAGTTaGGGTGCACTGAAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: KTNSLRYPTLINPILWLYGTSSS*GALKVS
Trigger: GCTGACTTTCAGTGCACCCAAACTGGATGACGTGCC...GTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAGCAAGTAAAATGCAAAGCTaGAGAGGTACAGGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: NMLRKDVVVCRPLKTETASKMQS*RGTGSL
Trigger: AAGGCTGCCTGTACCTCTCAAGCTTTGCATTTTACT...TGCTGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTAGTTCTGACAGGCTCTaGCCATGTCTTTCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: HKLQKSQPAQIVILKFCCSSDRL*PCLSRS
Trigger: ACTTCTTGAAAGACATGGCAAGAGCCTGTCAGAACT...ACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GCAAACATGCTTAGAAAGGATGTGGTAGTGTGTAGGCCTCTGAAGACAGAAACAAGCCAGGATTTGAAATaGCGTCTGTTTGACTCCAAA +
Preference number: 5 (lower is better)
Translates to: ANMLRKDVVVCRPLKTETSQDLK*RLFDSK
Trigger: TTTGGAGTCAAACAGACGCAATTTCAAATCCTGGCT...TGTTTCTGTCTTCAGAGGCCTACACACTACCACATCCTTTCTAAGCATGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS CCA 90 bp ATAATCCTTCCGTCTTACTATTATGTGCAAACAGCAGCCAACTCTTaGAGGGAGATAGCAAAGAAATTTAATGGCATGCACACCCTCTGT +
Preference number: 5 (lower is better)
Translates to: IILPSYYYVQTAANS*REIAKKFNGMHTLC
Trigger: ACAGAGGGTGTGCATGCCATTAAATTTCTTTGCTATCTCCCTCCAAGAGTTGGCTGCTGTTTGCACATAATAGTAAGACGGAAGGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS-3UTR CAA 90 bp ACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATTCTGTGGCTTTACATCCCCATCCCCGTAAAATaGCACAATGGAATGATCGTG +
Preference number: 5 (lower is better)
Translates to: TNSLRYPTLINPILWLYIPIPVK*HNGMIV
Trigger: CACGATCATTCCATTGTGCAATTTTACGGGGATGGG...GATGTAAAGCCACAGAATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp GGAAAAGAGAAATCATCCATTTCCTCATGGATGATGAGGAAAAATGTGGTTGTCCCCATCCCCGTAAAATaGCACAATGGAATGATCGTG +
Preference number: 5 (lower is better)
Translates to: GKEKSSISSWMMRKNVVVPIPVK*HNGMIV
Trigger: CACGATCATTCCATTGTGCAATTTTACGGGGATGGG...GACAACCACATTTTTCCTCATCATCCATGAGGAAATGGATGATTTCTCTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp AATCACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTATGCACAAAGCATCTTaGCTTTTGCTAGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: NHKLQKSQPAQIVILKFCMHKAS*LLLAAT
Trigger: TGTGGCAGCTAGCAAAAGCAAAGATGCTTTGTGCAT...ACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000576183.5
CDS-3UTR CAA 90 bp CACAAGCTGCAAAAGAGCCAGCCCGCCCAAATAGTCATTCTTAAATTTTGTTGTCTTCCAAGGAATCTGTaGAGCTCTCTAGTAGTAGAT +
Preference number: 5 (lower is better)
Translates to: HKLQKSQPAQIVILKFCCLPRNL*SSLVVD
Trigger: ATCTACTACTAGAGAGCTCAACAGATTCCTTGGAAG...ACAACAAAATTTAAGAATGACTATTTGGGCGGGCTGGCTCTTTTGCAGCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS-3UTR CAA 90 bp AGAAATGATACCTGCACCCATTTCAGTGTTTCAACAAAGACTCAGCTTCTTTTCCTTCCACTCAATCTATaGCAGAATGTTTGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: RNDTCTHFSVSTKTQLLFLPLNL*QNVWVC
Trigger: GCAAACCCAAACATTCTGCAATAGATTGAGTGGAAG...GAAAAGAAGCTGAGTCTTTGTTGAAACACTGAAATGGGTGCAGGTATCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000573500.5
CDS-3UTR CAA 90 bp TCTTCCCAGAAAGAAAACAAACAGTCTGAGGTATCCCACATTAATAAATCCCATCAACAGGAACTTCTGTaGCAAAAAGGCCTTATATGT +
Preference number: 5 (lower is better)
Translates to: SSQKENKQSEVSHINKSHQQELL*QKGLIC
Trigger: ACATATAAGGCCTTTTTGCAACAGAAGTTCCTGTTG...ATGGGATTTATTAATGTGGGATACCTCAGACTGTTTGTTTTCTTTCTGGGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS CCA 72 bp AGGAGCTGCCAGTCGGCCCCGGCCAGAGCGGGCTGCTaGAGCTCGGCGCAGGCCTCCCAGAACTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RSCQSAPARAGC*SSAQASQNCSS
Trigger: GGAGGAGCAGTTCTGGGAGGCCTGCGCCGAGCTCCAGCAGCCCGCTCTGGCCGGGGCCGACTGGCAGCTCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268896.10
ENST00000417982.6
ENST00000573500.5
ENST00000576183.5
CDS TCA 72 bp CAGAGCTTGAGACAGGGTCCGGGCGGAGCTCCTTCCTaGGCCGGAGAAGACGCGCCCCTGTCCCTTCCGCGA +
Preference number: 6 (lower is better)
Translates to: QSLRQGPGGAPS*AGEDAPLSLPR
Trigger: TCGCGGAAGGGACAGGGGCGCGTCTTCTCCGGCTCAGGAAGGAGCTCCGCCCGGACCCTGTCTCAAGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS TCA 72 bp ACTTGGAGGCACCGCCCCTGCGCTAGCTCCAGAGCTTaGGACAGGGTCCGGGCGGAGCTCCTTCCTGAGCCG +
Preference number: 6 (lower is better)
Translates to: TWRHRPCASSRA*DRVRAELLPEP
Trigger: CGGCTCAGGAAGGAGCTCCGCCCGGACCCTGTCTCAAGCTCTGGAGCTAGCGCAGGGGCGGTGCCTCCAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS TCA 72 bp GGTTGGCCGCTACCTTGTCCAGCAGCCGGTAGATGCTaGTGCCCGAGGTCTCCACTAGGAGCTGCCAGTCGG +
Preference number: 6 (lower is better)
Translates to: GWPLPCPAAGRC*CPRSPLGAASR
Trigger: CCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGGTAGCGGCCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS TCA 72 bp AAAGTCCAGTCTTCTTGTCCAGCAGCCGGTAGATGCTaGTGCCCGAGGTCTCCACTAGGAGCTGCCAGTCGG +
Preference number: 6 (lower is better)
Translates to: KVQSSCPAAGRC*CPRSPLGAASR
Trigger: CCGACTGGCAGCTCCTAGTGGAGACCTCGGGCATCAGCATCTACCGGCTGCTGGACAAGAAGACTGGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268896.10
ENST00000573500.5
ENST00000576183.5
CDS CCA 72 bp ATCTTGGCTGCAAGGGAGGCCTGGACAGACAGTGTCTaGCTGTTCCCTTGGATAGGTAAGCATCCCACTGCC +
Preference number: 6 (lower is better)
Translates to: ILAAREAWTDSV*LFPWIGKHPTA
Trigger: GGCAGTGGGATGCTTACCTATCCAAGGGAACAGCCAGACACTGTCTGTCCAGGCCTCCCTTGCAGCCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS TCA 72 bp TTCAGGGCTGGGAAAATGAGCAAGACACGGCCATGGTaGCGAATTCAGGGATGGCAGATCTGTCCAGAGTCG +
Preference number: 6 (lower is better)
Translates to: FRAGKMSKTRPW*RIQGWQICPES
Trigger: CGACTCTGGACAGATCTGCCATCCCTGAATTCGTCACCATGGCCGTGTCTTGCTCATTTTCCCAGCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CAA 90 bp GCAGTTCCCTCCCTTGGCGGCCCAGTTAATGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAAGTAATACATGAAAACTTTGCTCCC +
Preference number: 6 (lower is better)
Translates to: AVPSLGGPVNEPGRN*ATRVIEVIHENFAP
Trigger: GGGAGCAAAGTTTTCATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGGGCCGCCAAGGGAGGGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS CAA 90 bp CTCAAGGCCAGCCTTGGCGGCCCAGTTAATGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAAGTAATACATGAAAACTTTGCTCCC +
Preference number: 6 (lower is better)
Translates to: LKASLGGPVNEPGRN*ATRVIEVIHENFAP
Trigger: GGGAGCAAAGTTTTCATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGGGCCGCCAAGGCTGGCCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000576221.1
CDS CCA 72 bp GCCGCTGCCGAAGGTAGACATAGTCTCTGTTGGACATaGGAAAAGGGTACTTCACTTCCCAGTAGACCACAG +
Preference number: 6 (lower is better)
Translates to: AAAEGRHSLCWT*EKGTSLPSRPQ
Trigger: CTGTGGTCTACTGGGAAGTGAAGTACCCTTTTCCCATGTCCAACAGAGACTATGTCTACCTTCGGCAGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000571489.5
ENST00000573500.5
ENST00000576183.5
CDS CCA 72 bp CAAAGCAGGCTGATGGTCCCCATAATGCCAGGCTCCTaGGCAGTCTCTAGTGATACAAACTACCACTGCAGT +
Preference number: 6 (lower is better)
Translates to: QSRLMVPIMPGS*AVSSDTNYHCS
Trigger: ACTGCAGTGGTAGTTTGTATCACTAGAGACTGCCCAGGAGCCTGGCATTATGGGGACCATCAGCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS CCA 72 bp ATGTCACATGACTGTATCTTGGCTGCAAGGGAGGCCTaGACAGACAGTGTCTGGCTGTTCCCTTGGATAGGT +
Preference number: 6 (lower is better)
Translates to: MSHDCILAAREA*TDSVWLFPWIG
Trigger: ACCTATCCAAGGGAACAGCCAGACACTGTCTGTCCAGGCCTCCCTTGCAGCCAAGATACAGTCATGTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CAA 90 bp CACATGTGGGTCTTATTGGCAGAGTCTATGTCACATGACTGTATCTaGGCTGCAAGGGAGGCCTGGACAGACAGTGTCTGGCTGTTCCCT +
Preference number: 6 (lower is better)
Translates to: HMWVLLAESMSHDCI*AAREAWTDSVWLFP
Trigger: AGGGAACAGCCAGACACTGTCTGTCCAGGCCTCCCTTGCAGCCAAGATACAGTCATGTGACATAGACTCTGCCAATAAGACCCACATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS TCA 72 bp CCACATGTGGGTCTTATTGGCAGAGTCTATGTCACATaGCTGTATCTTGGCTGCAAGGGAGGCCTGGACAGA +
Preference number: 6 (lower is better)
Translates to: PHVGLIGRVYVT*LYLGCKGGLDR
Trigger: TCTGTCCAGGCCTCCCTTGCAGCCAAGATACAGTCATGTGACATAGACTCTGCCAATAAGACCCACATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CCA 72 bp TCTTATTGGCAGAGTCTATGTCACATGACTGTATCTTaGCTGCAAGGGAGGCCTGGACAGACAGTGTCTGGC +
Preference number: 6 (lower is better)
Translates to: SYWQSLCHMTVS*LQGRPGQTVSG
Trigger: GCCAGACACTGTCTGTCCAGGCCTCCCTTGCAGCCAAGATACAGTCATGTGACATAGACTCTGCCAATAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CCA 72 bp TTCAGGGCATCACCCTTCCCCTACTTCTCAGCTGCATaGTTTCGCAAGACTGACTCTGCAGTAATTTCAGGG +
Preference number: 6 (lower is better)
Translates to: FRASPFPYFSAA*FRKTDSAVISG
Trigger: CCCTGAAATTACTGCAGAGTCAGTCTTGCGAAACCATGCAGCTGAGAAGTAGGGGAAGGGTGATGCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CAA 72 bp TCCCTTGGCGGCCCAGTTAATGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAAGTAATACATGAAAAC +
Preference number: 6 (lower is better)
Translates to: SLGGPVNEPGRN*ATRVIEVIHEN
Trigger: GTTTTCATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGGGCCGCCAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576183.5
CDS CAA 72 bp AGCCTTGGCGGCCCAGTTAATGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAAGTAATACATGAAAAC +
Preference number: 6 (lower is better)
Translates to: SLGGPVNEPGRN*ATRVIEVIHEN
Trigger: GTTTTCATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGGGCCGCCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572536.1
ENST00000576221.1
CDS CAA 72 bp GTCTTATTGGCAGAGTCTATGTCACATGACTGTATCTaGGCTGCAAGGGAGGCCTGGACAGACAGTGTCTGG +
Preference number: 6 (lower is better)
Translates to: VLLAESMSHDCI*AAREAWTDSVW
Trigger: CCAGACACTGTCTGTCCAGGCCTCCCTTGCAGCCAAGATACAGTCATGTGACATAGACTCTGCCAATAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CAA 90 bp TCTGCTCTGATTCTTGGCGGCCCAGTTAATGAGCCAGGACGGAATTaGGCCACCCGGGTTATCGAAGTAATACATGAAAACTTTGCTCCC +
Preference number: 6 (lower is better)
Translates to: SALILGGPVNEPGRN*ATRVIEVIHENFAP
Trigger: GGGAGCAAAGTTTTCATGTATTACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATTAACTGGGCCGCCAAGAATCAGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573500.5
CDS CAA 72 bp CTCGGATGGACCAGAGTGAGATTTCCAACCTCAAGATaGTTCCAGCAAAGCCTAACTGCTGCTTCCACTGGA +
Preference number: 6 (lower is better)
Translates to: LGWTRVRFPTSR*FQQSLTAASTG
Trigger: TCCAGTGGAAGCAGCAGTTAGGCTTTGCTGGAACAATCTTGAGGTTGGAAATCTCACTCTGGTCCATCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS TCA 72 bp ACAGGAGGAGCCCTCTTCCATCCGCCGCTGCCTCTATaGAATTCCAGCATCATTTTTCTGGTTTTCATTTGG +
Preference number: 6 (lower is better)
Translates to: TGGALFHPPLPL*NSSIIFLVFIW
Trigger: CCAAATGAAAACCAGAAAAATGATGCTGGAATTTCATAGAGGCAGCGGCGGATGGAAGAGGGCTCCTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576221.1
CDS GCA 72 bp TCCAACCTCAAGATTGTTCCAGCAAAGCCTAACTGCTaGTTCCACTGGATGAGAACCCAGAGTGAAAGCTGT +
Preference number: 6 (lower is better)
Translates to: SNLKIVPAKPNC*FHWMRTQSESC
Trigger: ACAGCTTTCACTCTGGGTTCTCATCCAGTGGAAGCAGCAGTTAGGCTTTGCTGGAACAATCTTGAGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CCA 72 bp CACAAGCTTGTGGAAAGGATACGTCTCTGTTGGACATaGGAAAAGGGTACTTCACTTCCCAGTAGACCACAG +
Preference number: 6 (lower is better)
Translates to: HKLVERIRLCWT*EKGTSLPSRPQ
Trigger: CTGTGGTCTACTGGGAAGTGAAGTACCCTTTTCCCATGTCCAACAGAGACGTATCCTTTCCACAAGCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS CCA 72 bp AAGCGCCACAAGCTTGTGGAAAGGATACGTCTCTGTTaGACATGGGAAAAGGGTACTTCACTTCCCAGTAGA +
Preference number: 6 (lower is better)
Translates to: KRHKLVERIRLC*TWEKGTSLPSR
Trigger: TCTACTGGGAAGTGAAGTACCCTTTTCCCATGTCCAACAGAGACGTATCCTTTCCACAAGCTTGTGGCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417982.6
CDS CAA 90 bp GGGATGGCAGATCTGTCCAGAGTCGTAGTTAGTCACTCTAGCAAGTaGAGAGCAAAAAGTGATTTAGTAAAGCTCTCGGATGGACCAGAG +
Preference number: 6 (lower is better)
Translates to: GMADLSRVVVSHSSK*RAKSDLVKLSDGPE
Trigger: CTCTGGTCCATCCGAGAGCTTTACTAAATCACTTTTTGCTCTCAACTTGCTAGAGTGACTAACTACGACTCTGGACAGATCTGCCATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS TCA 72 bp ATGCTGCCTGCTTCCTCACATGGCTCTTTTCCAAATTaGAGCCACATGTGGGTCTTATTGGCAGAGTCTATG +
Preference number: 6 (lower is better)
Translates to: MLPASSHGSFPN*SHMWVLLAESM
Trigger: CATAGACTCTGCCAATAAGACCCACATGTGGCTTCAATTTGGAAAAGAGCCATGTGAGGAAGCAGGCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS TCA 72 bp TTGTTTTCCCTAAAGTCAGATGCCATCACTGGTCACTaGAAAATGGATCTTCCATGCTGCCTGCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: LFSLKSDAITGH*KMDLPCCLLPH
Trigger: GTGAGGAAGCAGGCAGCATGGAAGATCCATTTTTCAGTGACCAGTGATGGCATCTGACTTTAGGGAAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS GCA 72 bp TCACTGGTCACTGAAAAATGGATCTTCCATGCTGCCTaGTTCCTCACATGGCTCTTTTCCAAATTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: SLVTEKWIFHAA*FLTWLFSKLKP
Trigger: TGGCTTCAATTTGGAAAAGAGCCATGTGAGGAAGCAGGCAGCATGGAAGATCCATTTTTCAGTGACCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CCA 72 bp TCAGCAGTTGTTTTCCCTAAAGTCAGATGCCATCACTaGTCACTGAAAAATGGATCTTCCATGCTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: SAVVFPKVRCHH*SLKNGSSMLPA
Trigger: AGCAGGCAGCATGGAAGATCCATTTTTCAGTGACCAGTGATGGCATCTGACTTTAGGGAAAACAACTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CCA 72 bp GCTCTTTTCCAAATTGAAGCCACATGTGGGTCTTATTaGCAGAGTCTATGTCACATGACTGTATCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: ALFQIEATCGSY*QSLCHMTVSWL
Trigger: CAGCCAAGATACAGTCATGTGACATAGACTCTGCCAATAAGACCCACATGTGGCTTCAATTTGGAAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CAA 72 bp CACTTCCCAGTAGACCACAGTCTCTCCGTTGCATTCTaGTTCATAGAGTTCTTTAACATACTGGTCCCATTG +
Preference number: 6 (lower is better)
Translates to: HFPVDHSLSVAF*FIEFFNILVPL
Trigger: CAATGGGACCAGTATGTTAAAGAACTCTATGAACAAGAATGCAACGGAGAGACTGTGGTCTACTGGGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000573500.5
ENST00000576183.5
CDS TCA 72 bp AAAAGTGATTTAGTAAAGCTCTCGGATGGACCAGAGTaGGATTTCCAACCTCAAGATTGTTCCAGCAAAGCC +
Preference number: 6 (lower is better)
Translates to: KSDLVKLSDGPE*DFQPQDCSSKA
Trigger: GGCTTTGCTGGAACAATCTTGAGGTTGGAAATCTCACTCTGGTCCATCCGAGAGCTTTACTAAATCACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS TCA 72 bp TCTCCCATGTTTCTTTGCACTATGCCACAGCTAGGGTaGCCAAATTTCCCTAATAATCCTTCCGTCTTACTA +
Preference number: 6 (lower is better)
Translates to: SPMFLCTMPQLG*PNFPNNPSVLL
Trigger: TAGTAAGACGGAAGGATTATTAGGGAAATTTGGTCACCCTAGCTGTGGCATAGTGCAAAGAAACATGGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS GCA 72 bp TCTTCTGGCAGACATCTTGGCCATGACATAAGAATCTaGCTAGGAATTAGGTCAACACAGAAGAAAACAGAG +
Preference number: 6 (lower is better)
Translates to: SSGRHLGHDIRI*LGIRSTQKKTE
Trigger: CTCTGTTTTCTTCTGTGTTGACCTAATTCCTAGGCAGATTCTTATGTCATGGCCAAGATGTCTGCCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS GCA 72 bp GGTACTTCACTTCCCAGTAGACCACAGTCTCTCCGTTaGATTCTTGTTCATAGAGTTCTAAAGGAAAGCAAA +
Preference number: 6 (lower is better)
Translates to: GTSLPSRPQSLR*ILVHRVLKESK
Trigger: TTTGCTTTCCTTTAGAACTCTATGAACAAGAATGCAACGGAGAGACTGTGGTCTACTGGGAAGTGAAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CCA 72 bp CCGTCTTACTATTATGTGCAAACAGCAGCCAACTCTTaGAGGGAGATAGCAAAGAAATTTAATGGCATGCAC +
Preference number: 6 (lower is better)
Translates to: PSYYYVQTAANS*REIAKKFNGMH
Trigger: GTGCATGCCATTAAATTTCTTTGCTATCTCCCTCCAAGAGTTGGCTGCTGTTTGCACATAATAGTAAGACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CAA 72 bp TGTAATCTGAGTCCATATAGATGTCTGCCAGTAGAGTaGGTGAGCAGTCCTCCAGAACACCAAAGACTTTAT +
Preference number: 6 (lower is better)
Translates to: CNLSPYRCLPVE*VSSPPEHQRLY
Trigger: ATAAAGTCTTTGGTGTTCTGGAGGACTGCTCACCAACTCTACTGGCAGACATCTATATGGACTCAGATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000573500.5
ENST00000576183.5
CDS CAA 72 bp GATCTGTCCAGAGTCGTAGTTAGTCACTCTAGCAAGTaGAGAGCAAAAAGTGATTTAGTAAAGCTCTCGGAT +
Preference number: 6 (lower is better)
Translates to: DLSRVVVSHSSK*RAKSDLVKLSD
Trigger: ATCCGAGAGCTTTACTAAATCACTTTTTGCTCTCAACTTGCTAGAGTGACTAACTACGACTCTGGACAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571489.5
CDS CAA 90 bp ATTGTTTTCTGTAATCTGAGTCCATATAGATGTCTGCCAGTAGAGTaGGTGAGCAGTCCTCCAGAACACCAAAGACTTTATACTCATAAA +
Preference number: 6 (lower is better)
Translates to: IVFCNLSPYRCLPVE*VSSPPEHQRLYTHK
Trigger: TTTATGAGTATAAAGTCTTTGGTGTTCTGGAGGACTGCTCACCAACTCTACTGGCAGACATCTATATGGACTCAGATTACAGAAAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268896.10
ENST00000325214.10
ENST00000417982.6
ENST00000573500.5
ENST00000576183.5
CDS CCA 72 bp AAAAGTAGAATTCTCCTTCCTCTGGGGTTATTCATATaGTTAGAATATAAATCTGGATCTTCTGGCAGACAT +
Preference number: 6 (lower is better)
Translates to: KSRILLPLGLFI*LEYKSGSSGRH
Trigger: ATGTCTGCCAGAAGATCCAGATTTATATTCTAACCATATGAATAACCCCAGAGGAAGGAGAATTCTACTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571489.5