RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCSK9 (Homo sapiens)

Ensembl gene IDs: ENSG00000169174

Ensembl transcript IDs: ENST00000302118.5, ENST00000490692.1, ENST00000673662.1, ENST00000673726.1, ENST00000673903.1, ENST00000673913.1

Found 614 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCACTGGTTGGGCTaGCCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTCC +
Preference number: 1 (lower is better)
Translates to: EAWMLASLWPTHWLG*PRGLSTGGLWVPRS
Trigger: GGACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR CCA 90 bp GATGCTGGCCTCCCTGTGGCCCACGCACTGGTTGGGCTGACCTCGTaGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTC +
Preference number: 1 (lower is better)
Translates to: DAGLPVAHALVGLTS*PQHRRLVGAKVLHL
Trigger: GAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR TCA 90 bp GAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCAGAGTGAGTaGGTTCCAGGCAAGGAGGCTGCCCCACTCAAGGGCCAGGCCAGC +
Preference number: 1 (lower is better)
Translates to: ELPGTSTWGGGTQSE*VPGKEAAPLKGQAS
Trigger: GCTGGCCTGGCCCTTGAGTGGGGCAGCCTCCTTGCCTGGAACTCACTCACTCTGGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CCA 90 bp AGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCACTGGTTaGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAA +
Preference number: 1 (lower is better)
Translates to: SRKRGCWPPCGPRTG*ADLVASAQAACGCQ
Trigger: TTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR CCA 90 bp CTTTGCATTCCAGACCTGGGGCATGGCAGCAGGAAGCGTGGATGCTaGCCTCCCTGTGGCCCACGCACTGGTTGGGCTGACCTCGTGGCC +
Preference number: 1 (lower is better)
Translates to: LCIPDLGHGSRKRGC*PPCGPRTGWADLVA
Trigger: GGCCACGAGGTCAGCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR CCA 90 bp CTGAGGGGCCGGGATTCCATGCTCCTTGACTTTGCATTCCAGACCTaGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: LRGRDSMLLDFAFQT*GMAAGSVDAGLPVA
Trigger: GGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCCCGGCCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR TCA 90 bp AGGCCACGGTCACCTGCTCCTGAGGGGCCGGGATTCCATGCTCCTTaGCTTTGCATTCCAGACCTGGGGCATGGCAGCAGGAAGCGTGGA +
Preference number: 1 (lower is better)
Translates to: RPRSPAPEGPGFHAP*LCIPDLGHGSRKRG
Trigger: TCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCCCGGCCCCTCAGGAGCAGGTGACCGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR GCA 90 bp GCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATaGCTTAGAAGCATCTCCGCCAGGCCAGTGAATCAGGCCTGGGTG +
Preference number: 1 (lower is better)
Translates to: AGAQGGTVVGPLPRP*LRSISARPVNQAWV
Trigger: CACCCAGGCCTGATTCACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR TCA 90 bp CACATTGGGAGCAGCTGGCAGCACCCGAGCACAGCTCGACCTGTTTaGATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCAC +
Preference number: 1 (lower is better)
Translates to: HIGSSWQHPSTARPV*MVKCPTVREGASWH
Trigger: GTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCTGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR TCA 90 bp TTCAGAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTaGGCTTGGCAGGCACGCCCCCTCTGGTTCCAGGTTTCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: FRASPICVSGSVPAV*AWQARPLWFQVSSS
Trigger: AGAGGAAGAAACCTGGAACCAGAGGGGGCGTGCCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CCA 90 bp AAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCTCCAGCCTCTaGCTAGATGCCATCCAGAAAGCTAAGCCTCCATTAATCAGGGAG +
Preference number: 1 (lower is better)
Translates to: KAQPVTTRGAPVSSL*LDAIQKAKPPLIRE
Trigger: CTCCCTGATTAATGGAGGCTTAGCTTTCTGGATGGCATCTAGCCAGAGGCTGGAGACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR GCA 90 bp GCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGGCATCGTTCTaGCATCACTCACCGAGCTTCCTGGTCTGTGTTCCCCTTCCCAGC +
Preference number: 1 (lower is better)
Translates to: AWVITEKVPCLQASF*HHSPSFLVCVPLPS
Trigger: GCTGGGAAGGGGAACACAGACCAGGAAGCTCGGTGAGTGATGGCAGAACGATGCCTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR GCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATaGCTGCAGGCATCGTTCTGCCATCACTCACCGAGCTTCCTGGTC +
Preference number: 1 (lower is better)
Translates to: ARPVNQAWVITEKVP*LQASFCHHSPSFLV
Trigger: GACCAGGAAGCTCGGTGAGTGATGGCAGAACGATGCCTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CCA 90 bp CGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGAATCAGGCCTaGGTGATAACGGAAAAAGTTCCATGCCTGCAGGCATCGTTCTGC +
Preference number: 1 (lower is better)
Translates to: RPCLRSISARPVNQA*VITEKVPCLQASFC
Trigger: GCAGAACGATGCCTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CCA 90 bp ACATTCTCGAAGTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTaGTCACTCTGTATGCTGGTGTCTAGGAGATACACCTCCACCAGG +
Preference number: 1 (lower is better)
Translates to: TFSKSVTMTLPSISR*SLCMLVSRRYTSTR
Trigger: CCTGGTGGAGGTGTATCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGACTTCGAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
3UTR CCA 90 bp TTCCATGCCTGCAGGCATCGTTCTGCCATCACTCACCGAGCTTCCTaGTCTGTGTTCCCCTTCCCAGCCTCACTGTTACCCGTAAAAATG +
Preference number: 1 (lower is better)
Translates to: FHACRHRSAITHRAS*SVFPFPASLLPVKM
Trigger: CATTTTTACGGGTAACAGTGAGGCTGGGAAGGGGAACACAGACCAGGAAGCTCGGTGAGTGATGGCAGAACGATGCCTGCAGGCATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR TCA 90 bp CTATCCATGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTaGATGCCTGGCACGGAACAAGAGCTCAATAAAAGTCATTCTGCC +
Preference number: 1 (lower is better)
Translates to: LSMGRILPPWWRPED*MPGTEQELNKSHSA
Trigger: GGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCATGGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR GCA 90 bp CTGGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCACTCAGGCGGCTTGTGGGTaGCAAGGTCCTCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: LGHGSRKRGCWPPCGPRTQAACG*QGPPPP
Trigger: GGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTG...AGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR-3UTR CCA 90 bp GACCTGGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCAGCACAGGCGGCTTGTaGGTGCCAAGGTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: DLGHGSRKRGCWPPCGPRSTGGL*VPRSST
Trigger: GGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGCT...GCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR-3UTR GCA 90 bp CTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACACACCTCCACCAGGCTaGCTCCGTCTCCGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LSVEAGPVLLGHILEVGDTPPPG*LRLRSS
Trigger: GCTGGAGCGGAGACGGAGGCAGCCTGGTGGAGGTGT...GTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
3UTR-3UTR TCA 90 bp AATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGCTCAGCCCCAGCCCTTaGCCCTCCCCAGACACCCAT +
Preference number: 2 (lower is better)
Translates to: NGEMPHSEGGSFLAPPPGLSPSP*PSPDTH
Trigger: ATGGGTGTCTGGGGAGGGTCAAGGGCTGGGGCTGAG...CCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGCCTCGTGCCAGGCCATaGAGGGCTGAGAGAGGGACA +
Preference number: 2 (lower is better)
Translates to: VVGPLPRPCLRSISARPVPRARP*RAERGT
Trigger: TGTCCCTCTCTCAGCCCTCCATGGCCTGGCACGAGG...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCACCTGGCACCTCCACCTaGGGAGGAGGCACCCAGAGT +
Preference number: 2 (lower is better)
Translates to: EGQLLALSPDHALEASPPPGTST*GGGTQS
Trigger: ACTCTGGGTGCCTCCTCCCCAGGTGGAGGTGCCAGG...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp CTGCTCCTGAGGGGCCGGGATTCCATGCTCCTTGACTTTGCATTCCAGACCTGGGGCCCACGCACTGGTTaGGCTGACCTCGTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: LLLRGRDSMLLDFAFQTWGPRTG*ADLVAS
Trigger: TGAGGCCACGAGGTCAGCCCAACCAGTGCGTGGGCC...CCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCCCGGCCCCTCAGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR-3UTR GCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAAACGATGTTTGTCCCTaGAGCCCCTACCGCCCCCTC +
Preference number: 2 (lower is better)
Translates to: EGQLLALSPDHALEASPPNDVCP*SPYRPL
Trigger: GAGGGGGCGGTAGGGGCTGCAGGGACAAACATCGTT...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCACACATTGGGAGCAGCTaGCAGCACCCGAGCACAGCT +
Preference number: 2 (lower is better)
Translates to: EGQLLALSPDHALEASPPHIGSS*QHPSTA
Trigger: AGCTGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTG...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CAA 90 bp GCACATTGGGAGCAGCTGGCAGCACCCGAGCACAGCTCGACCTGTTaGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: AHWEQLAAPEHSSTC*NGEMPHSEGGSFLA
Trigger: TGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCTGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR TCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGCTCAGCCCCAGCCCTTaGCCCTCCCCAGACACCCAT +
Preference number: 2 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQLSPSP*PSPDTH
Trigger: ATGGGTGTCTGGGGAGGGTCAAGGGCTGGGGCTGAG...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR TCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGGTGGAGCGGGTTGGCTaGGACAGTGCATGCACCACT +
Preference number: 2 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRVERVG*DSACTT
Trigger: AGTGGTGCATGCACTGTCTCAGCCAACCCGCTCCAC...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR GCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGAACGATGTTTGTCCCTaGAGCCCCTACCGCCCCCTC +
Preference number: 2 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRNDVCP*SPYRPL
Trigger: GAGGGGGCGGTAGGGGCTGCAGGGACAAACATCGTT...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGCCTGGCACCTCCACCTaGGGAGGAGGCACCCAGAGT +
Preference number: 2 (lower is better)
Translates to: ESCLLGGDLRIECLARNKPGTST*GGGTQS
Trigger: ACTCTGGGTGCCTCCTCCCCAGGTGGAGGTGCCAGG...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCAGGGAGGGAGCTTCCTaGCACCTCCACCTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTREGAS*HLHLGR
Trigger: CCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCT...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGAGGGAGGGAGCTTCCTaGCACCTCCACCTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: ESCLLGGDLRIECLARNKREGAS*HLHLGR
Trigger: CCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCT...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGCCCGCAGGCCACCTTTaGGTGTTGCTAGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRPAGHL*VLLAQP
Trigger: AGGCTGTGCTAGCAACACCCAAAGGTGGCCTGCGGG...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CAA 90 bp AAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTaGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCA +
Preference number: 2 (lower is better)
Translates to: KCLLAWVGLVLKEGQ*LALSPDHALEASPP
Trigger: TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR GCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCGACCTGAGGATTGAATaGCTGGCACGGAACAAGAGC +
Preference number: 2 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVDLRIE*LARNKS
Trigger: GCTCTTGTTCCGTGCCAGGCATTCAATCCTCAGGTC...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CAA 90 bp AGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTaGGCAGGCACGCCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAA +
Preference number: 2 (lower is better)
Translates to: SQPNLRFWLSSCCVS*AGTPPLVPGFFLCE
Trigger: TTCACAGAGGAAGAAACCTGGAACCAGAGGGGGCGTGCCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR TCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTACAGTTAGCTGGAGATaGGGGCCATCAGCACCTTTC +
Preference number: 2 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPTVSWR*GPSAPF
Trigger: GAAAGGTGCTGATGGCCCTCATCTCCAGCTAACTGT...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR GCA 90 bp CTGTCACACTTGCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACAGGTGGTCACTCTGTATaGTGGTGTCTAGGAGATACA +
Preference number: 2 (lower is better)
Translates to: LSHLLACLWKRVPSSSGTGGHSV*WCLGDT
Trigger: TGTATCTCCTAGACACCAGCATACAGAGTGACCACC...TGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAAGTGTGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
3UTR-3UTR TCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGACAGCTCGACCTGTTTaGATGGTGAAATGCCCCACA +
Preference number: 2 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRTARPV*MVKCPT
Trigger: TGTGGGGCATTTCACCATTCAAACAGGTCGAGCTGT...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR TCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGAGGTTTCTTCCTCTGTaGAGTAGGGGTGCGAATGTG +
Preference number: 2 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRRFLPL*SRGANV
Trigger: CACATTCGCACCCCTACTTCACAGAGGAAGAAACCT...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp CCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCTGCCCTCGATTGGTCACTCTGTATGCTaGTGTCTAGGAGATACACCT +
Preference number: 2 (lower is better)
Translates to: PSSSGTFSKSVTMTLPSIGHSVC*CLGDTP
Trigger: AGGTGTATCTCCTAGACACCAGCATACAGAGTGACC...AATCGAGGGCAGGGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
3UTR-3UTR TCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGGGCACCCAGAGTGAGTaGGTTCCAGGCAAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLGTQSE*VPGKEA
Trigger: AGCCTCCTTGCCTGGAACTCACTCACTCTGGGTGCC...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR TCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGTGGAGACCTGAGGATTaGATGCCTGGCACGGAACAA +
Preference number: 2 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQWRPED*MPGTEQ
Trigger: TTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCA...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CAA 90 bp AACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATaGGGAGCAGCTGGCAGCACCCGAGCACAGCTCGACCTGTTTGAA +
Preference number: 2 (lower is better)
Translates to: NKSSIKVILPTDIGT*GAAGSTRAQLDLFE
Trigger: TTCAAACAGGTCGAGCTGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR TCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGAGGTTTCTTCCTCTGTaGAGTAGGGGTGCGAATGTG +
Preference number: 2 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQRFLPL*SRGANV
Trigger: CACATTCGCACCCCTACTTCACAGAGGAAGAAACCT...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGCCTGTCTCCAGCCTCTaGCTAGATGCCATCCAGAAA +
Preference number: 2 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLPVSSL*LDAIQK
Trigger: TTTCTGGATGGCATCTAGCCAGAGGCTGGAGACAGG...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR GCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGACCTGAGGATTGAATaGCTGGCACGGAACAAGAGC +
Preference number: 2 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKEDLRIE*LARNKS
Trigger: GCTCTTGTTCCGTGCCAGGCATTCAATCCTCAGGTC...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGCCTGTCTCCAGCCTCTaGCTAGATGCCATCCAGAAA +
Preference number: 2 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKEPVSSL*LDAIQK
Trigger: TTTCTGGATGGCATCTAGCCAGAGGCTGGAGACAGG...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR TCA 72 bp ATGCTGGCCTCCCTGTGGCCCACGCACTGGTTGGGCTaGCCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTG +
Preference number: 3 (lower is better)
Translates to: MLASLWPTHWLG*PRGLSTGGLWV
Trigger: CACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR GCA 72 bp GCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTaGCAAGGTCCTCCACCTCCCAGTGGGAGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: ADLVASAQAACG*QGPPPPSGSCS
Trigger: GCTGCAGCTCCCACTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR CCA 72 bp CCAGACCTGGGGCATGGCAGCAGGAAGCGTGGATGCTaGCCTCCCTGTGGCCCACGCACTGGTTGGGCTGAC +
Preference number: 3 (lower is better)
Translates to: PDLGHGSRKRGC*PPCGPRTGWAD
Trigger: GTCAGCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR-3UTR CAA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCCCCGCAGGCCACCTTaGGGTGTTGCTAGCACAGCC +
Preference number: 3 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCPRRPP*GVASTA
Trigger: GGCTGTGCTAGCAACACCCAAAGGTGGCCTGCGGGG...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR TCA 72 bp GGCACCTCCACCTGGGGAGGAGGCACCCAGAGTGAGTaGGTTCCAGGCAAGGAGGCTGCCCCACTCAAGGGC +
Preference number: 3 (lower is better)
Translates to: GTSTWGGGTQSE*VPGKEAAPLKG
Trigger: GCCCTTGAGTGGGGCAGCCTCCTTGCCTGGAACTCACTCACTCTGGGTGCCTCCTCCCCAGGTGGAGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR GCA 72 bp ATTCCAGACCTGGGGCATGGCAGCAGGAAGCGTGGATaGTGGCCTCCCTGTGGCCCACGCACTGGTTGGGCT +
Preference number: 3 (lower is better)
Translates to: IPDLGHGSRKRG*WPPCGPRTGWA
Trigger: AGCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR CCA 72 bp TTGCATTCCAGACCTGGGGCATGGCAGCAGGAAGCGTaGATGCTGGCCTCCCTGTGGCCCACGCACTGGTTG +
Preference number: 3 (lower is better)
Translates to: LHSRPGAWQQEA*MLASLWPTHWL
Trigger: CAACCAGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR CCA 72 bp GTGCGAATGTGTACCCTGCCGGGTAGTGGAGCGGGTTaGCTGAGACAGTGCATGCACCACTGCACACTGCCG +
Preference number: 3 (lower is better)
Translates to: VRMCTLPGSGAG*LRQCMHHCTLP
Trigger: CGGCAGTGTGCAGTGGTGCATGCACTGTCTCAGCCAACCCGCTCCACTACCCGGCAGGGTACACATTCGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CAA 90 bp TCCTTGACTTTGCATTCCAGACCTGGGGCATGGCAGCAGGAAGCGTGGATGCTGCTCAGCACAGGCGGCTaGTGGGTGCCAAGGTCCTCC +
Preference number: 3 (lower is better)
Translates to: SLTLHSRPGAWQQEAWMLLSTGG*WVPRSS
Trigger: GGAGGACCTTGGCACCCACAAGCCGCCTGTGCTGAG...CAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAAGTCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR TCA 72 bp GAATGTGTACCCTGCCGGGTAGTGGAGCGGGTTGGCTaGGACAGTGCATGCACCACTGCACACTGCCGAGTC +
Preference number: 3 (lower is better)
Translates to: ECVPCRVVERVG*DSACTTAHCRV
Trigger: GACTCGGCAGTGTGCAGTGGTGCATGCACTGTCTCAGCCAACCCGCTCCACTACCCGGCAGGGTACACATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR GCA 72 bp CAGAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTaGTGTGTGAGCTTGGCAGGCACGCCCCCTCTGGTT +
Preference number: 3 (lower is better)
Translates to: QSQPNLRFWLSS*CVSLAGTPPLV
Trigger: AACCAGAGGGGGCGTGCCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR TCA 72 bp AGCAGCTGGCAGCACCCGAGCACAGCTCGACCTGTTTaGATGGTGAAATGCCCCACAGTGAGGGAGGGAGCT +
Preference number: 3 (lower is better)
Translates to: SSWQHPSTARPV*MVKCPTVREGA
Trigger: AGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCTGTGCTCGGGTGCTGCCAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR TCA 72 bp AGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTaGGCTTGGCAGGCACGCCCCCTCTGGTTCCAGGTT +
Preference number: 3 (lower is better)
Translates to: SPICVSGSVPAV*AWQARPLWFQV
Trigger: AACCTGGAACCAGAGGGGGCGTGCCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR GCA 72 bp CCCTACCGCCCCCTCCCCTATCCATGGGAAGAATCCTaGCTCCTTGGTGGAGACCTGAGGATTGAATGCCTG +
Preference number: 3 (lower is better)
Translates to: PYRPLPYPWEES*LLGGDLRIECL
Trigger: CAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCATGGATAGGGGAGGGGGCGGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR GCA 72 bp CAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATaGCTTAGAAGCATCTCCGCCAGGCCAGTGAATCAG +
Preference number: 3 (lower is better)
Translates to: QGGTVVGPLPRP*LRSISARPVNQ
Trigger: CTGATTCACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CCA 72 bp GAGGCTTGGCTTCAGAGCCAGCCCAATCTGCGTTTCTaGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGCACG +
Preference number: 3 (lower is better)
Translates to: EAWLQSQPNLRF*LSSCCVSLAGT
Trigger: CGTGCCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTCTGAAGCCAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CCA 72 bp CGGGATTCCATGCTCCTTGACTTTGCATTCCAGACCTaGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTC +
Preference number: 3 (lower is better)
Translates to: RDSMLLDFAFQT*GMAAGSVDAGL
Trigger: GAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR CCA 72 bp CCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTaGTGTCTAGGAGATACACCTCCACCAGGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: PCPRFPGGHSVC*CLGDTPPPGCL
Trigger: GAGGCAGCCTGGTGGAGGTGTATCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
3UTR CCA 72 bp CCTGTGACCACCAGGGGCGCACCTGTCTCCAGCCTCTaGCTAGATGCCATCCAGAAAGCTAAGCCTCCATTA +
Preference number: 3 (lower is better)
Translates to: PVTTRGAPVSSL*LDAIQKAKPPL
Trigger: TAATGGAGGCTTAGCTTTCTGGATGGCATCTAGCCAGAGGCTGGAGACAGGTGCGCCCCTGGTGGTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CCA 72 bp TGCAGGCATCGTTCTGCCATCACTCACCGAGCTTCCTaGTCTGTGTTCCCCTTCCCAGCCTCACTGTTACCC +
Preference number: 3 (lower is better)
Translates to: CRHRSAITHRAS*SVFPFPASLLP
Trigger: GGGTAACAGTGAGGCTGGGAAGGGGAACACAGACCAGGAAGCTCGGTGAGTGATGGCAGAACGATGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR-3UTR CAA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGCACAGCTCGACCTGTTaGAATGGTGAAATGCCCCAC +
Preference number: 3 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRHSSTC*NGEMPH
Trigger: GTGGGGCATTTCACCATTCAAACAGGTCGAGCTGTG...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CCA 72 bp AAGTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTaGTCACTCTGTATGCTGGTGTCTAGGAGATACACC +
Preference number: 3 (lower is better)
Translates to: KSVTMTLPSISR*SLCMLVSRRYT
Trigger: GGTGTATCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
3UTR-3UTR CAA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGCACAGCTCGACCTGTTaGAATGGTGAAATGCCCCAC +
Preference number: 3 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQHSSTC*NGEMPH
Trigger: GTGGGGCATTTCACCATTCAAACAGGTCGAGCTGTG...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR TCA 72 bp TCACTGTTACCCGTAAAAATGAGGAGCCCAGCCGGGTaGAGTAAGAAGAGGCTTGGCTTCAGAGCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: SLLPVKMRSPAG*SKKRLGFRASP
Trigger: TGGGCTGGCTCTGAAGCCAAGCCTCTTCTTACTTCACCCGGCTGGGCTCCTCATTTTTACGGGTAACAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR GCA 72 bp GTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATaGCTGCAGGCATCGTTCTGCCATCACTCACCGAGC +
Preference number: 3 (lower is better)
Translates to: VNQAWVITEKVP*LQASFCHHSPS
Trigger: GCTCGGTGAGTGATGGCAGAACGATGCCTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR GCA 72 bp AGGCAACAGAGAGGACAGACCCAAAAGATAAATGTCTaGTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGAC +
Preference number: 3 (lower is better)
Translates to: RQQRGQTQKINV*LLGWGWCSRRD
Trigger: GTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGTCCTCTCTGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR TCA 72 bp ATCCATGGGAAGAATCCTGCCTCCTTGGTGGAGACCTaGGGATTGAATGCCTGGCACGGAACAAGAGCTCAA +
Preference number: 3 (lower is better)
Translates to: IHGKNPASLVET*GLNAWHGTRAQ
Trigger: TTGAGCTCTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCACGCCGGCGGCGCCTTaGGCCTTGCGGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPTPAAP*ALRWGG
Trigger: TCCTCCCCACCGCAAGGCTCAAGGCGCCGCCGGCGT...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR GCA 90 bp GCACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGTGGGAGCTGCAGCCCCCTTGGGCCTCCATaGGCTCGCCCCGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: AQAACGCQGPPPPSGSCSPLGPP*ARPAAS
Trigger: GGAAGCGGCGGGGCGAGCGCATGGAGGCCCAAGGGG...GCTGCAGCTCCCACTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp GCACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGTGGGAGCTGCAGCCTGCCCCATGGGTGCTaGGGGGCAGGGCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: AQAACGCQGPPPPSGSCSLPHGC*GAGRPP
Trigger: TGGTGGCCGCCCTGCCCCCCAGCACCCATGGGGCAG...GCTGCAGCTCCCACTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCCCCTTGGGCCTCCATaGGCTCGCCCCGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCPLGPP*ARPAAS
Trigger: GGAAGCGGCGGGGCGAGCGCATGGAGGCCCAAGGGG...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGCAGCAGCTCCTCATCTaGGGCGCAGCGGGCGACGGC +
Preference number: 4 (lower is better)
Translates to: PRGLSTGGLWVPRSSTSQQQLLI*GAAGDG
Trigger: GCCGTCGCCCGCTGCGCCCCAGATGAGGAGCTGCTG...CTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR TCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCCGGCATCCCGGCCGCTaGCCACCCCTGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVRHPGR*PPLPGG
Trigger: CCCACCTGGCAGGGGTGGTCAGCGGCCGGGATGCCG...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CTGTCACACTTGCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACAGCTGGGAGCCGCTGCTaGAACGACGCGTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LSHLLACLWKRVPSSSGTAGSRC*NDASRP
Trigger: GGGCCGGGACGCGTCGTTGCAGCAGCGGCTCCCAGC...TGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAAGTGTGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGCCCCTTGGGCCTCCATaGGCTCGCCCCGCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPPLGPP*ARPAAS
Trigger: GGAAGCGGCGGGGCGAGCGCATGGAGGCCCAAGGGG...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GCACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGTGGGAGCTGCAGCGGGCGGCCACCAGGTTaGGGGTCAGTACCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: AQAACGCQGPPPPSGSCSGRPPG*GSVPAG
Trigger: ACCAGCGGGTACTGACCCCCAACCTGGTGGCCGCCC...GCTGCAGCTCCCACTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CTGGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCACTACCAGCTTGCCCCCTTaGGCCTCCATGCGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LGHGSRKRGCWPPCGPRTTSLPP*ASMRSP
Trigger: GGGCGAGCGCATGGAGGCCCAAGGGGGCAAGCTGGT...AGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCACGTGGCCCTGTTGGTaGCAGTGGACACGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPTWPCW*QWTRVP
Trigger: GGGGACCCGTGTCCACTGCCACCAACAGGGCCACGT...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCATGCTGGCCTCCCTGTaGCCCACGCACTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPMLASL*PTHWLG
Trigger: GCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCAT...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCTCCAGGCTCAGACCCTaGACTGAACGGCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCSRLRP*TERRRP
Trigger: CGGGCGCCGCCGTTCAGTTCAGGGTCTGAGCCTGGA...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR TCA 90 bp AAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCTGACGCCGGCGGCGCCTTaGGCCTTGCGGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KRVPSSSGTFSKSVTMTLTPAAP*ALRWGG
Trigger: TCCTCCCCACCGCAAGGCTCAAGGCGCCGCCGGCGT...CAGGGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTCGGCATCCCGGCCGCTaGCCACCCCTGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPRHPGR*PPLPGG
Trigger: CCCACCTGGCAGGGGTGGTCAGCGGCCGGGATGCCG...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCACGGCGGCGCCCGCCTaGAACCATGAGCGCCTCGAC +
Preference number: 4 (lower is better)
Translates to: AGLSVEAGPVLLGHILEVTAAPA*NHERLD
Trigger: GTCGAGGCGCTCATGGTTGCAGGCGGGCGCCGCCGT...GACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGGCTGGGAGCCGCTGCTaGAACGACGCGTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGAGSRC*NDASRP
Trigger: GGGCCGGGACGCGTCGTTGCAGCAGCGGCTCCCAGC...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR GCA 90 bp CACGCACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCCAGGCGGCTTGTGGGTaGCAAGGTCCTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: HALVGLTSWPQHRRLVGAQAACG*QGPPPP
Trigger: GGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTG...GGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp CACGCACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCTCCCAGGGAGGGCACTaGAGCCAGTCAGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HALVGLTSWPQHRRLVGASQGGH*SQSGSS
Trigger: GCTGGACCCTGACTGGCTGCAGTGCCCTCCCTGGGA...GGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAAGCTCCTGGGAGGCCTaGGCCAGGTGCCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTSSWEA*ARCRLR
Trigger: CCGGAGCCGGCACCTGGCGCAGGCCTCCCAGGAGCT...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTGCCCTCGCCAGGCGCTaGCAGGCGGCGTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCALARR*QAALRT
Trigger: CGTCCTCAACGCCGCCTGCCAGCGCCTGGCGAGGGC...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCGCCCTCGCCAGGCGCTaGCAGGCGGCGTTGAGGACG +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVALARR*QAALRT
Trigger: CGTCCTCAACGCCGCCTGCCAGCGCCTGGCGAGGGC...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGCTGCCCCATGGGTGCTaGGGGGCAGGGCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGLPHGC*GAGRPP
Trigger: TGGTGGCCGCCCTGCCCCCCAGCACCCATGGGGCAG...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCCTGCCCCATGGGTGCTaGGGGGCAGGGCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVLPHGC*GAGRPP
Trigger: TGGTGGCCGCCCTGCCCCCCAGCACCCATGGGGCAG...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCGCTGGTGGAGCTGTGTaGACGCTGCAGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPAGGAV*TLQLAW
Trigger: CCAGGCCAACTGCAGCGTCCACACAGCTCCACCAGC...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GCAGCCAGTCAGGGTCCAGCCCTCCTCGCAGGCCACGGTCACCTGCTCCTGAGGGTTGGGCTGACCTCGTaGCCTCAGCACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: AASQGPALLAGHGHLLLRVGLTS*PQHRRL
Trigger: AAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAAC...CCTCAGGAGCAGGTGACCGTGGCCTGCGAGGAGGGCTGGACCCTGACTGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CCAGACCTGGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCAATGCTGGCCTCCCTGTaGCCCACGCACTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PDLGHGSRKRGCWPPCGPMLASL*PTHWLG
Trigger: GCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCAT...TGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CTGGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCACTAGGAAGCGTGGATGCTaGCCTCCCTGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: LGHGSRKRGCWPPCGPRTRKRGC*PPCGPR
Trigger: GCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCT...AGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR TCA 90 bp TGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCGCTCAGACCCTGAACTaGACGGCGGCGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: WKRVPSSSGTFSKSVTMTAQTLN*TAAPAC
Trigger: GCAGGCGGGCGCCGCCGTTCAGTTCAGGGTCTGAGC...GGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp CACTTGCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGTCCAGGCTCAGACCCTaGACTGAACGGCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: HLLACLWKRVPSSSGTFSSRLRP*TERRRP
Trigger: CGGGCGCCGCCGTTCAGTTCAGGGTCTGAGCCTGGA...CGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAAGTTGCCGGCAGCGGTaGCCAGCACGACCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTSCRQR*PARPQP
Trigger: GGGCTGGGGTCGTGCTGGTCACCGCTGCCGGCAACT...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GCACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGTGGGAGCTGCAGCACGCACTGGTTGGGCTaGCCTCGTGGCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: AQAACGCQGPPPPSGSCSTHWLG*PRGLST
Trigger: TGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGT...GCTGCAGCTCCCACTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCACGGCGGCGCCCGCCTaGAACCATGAGCGCCTCGAC +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVTAAPA*NHERLD
Trigger: GTCGAGGCGCTCATGGTTGCAGGCGGGCGCCGCCGT...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR GCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCGGAGCTGGGAGCCGCTaGTGCAACGACGCGTCCCGG +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVGAGSR*CNDASR
Trigger: CCGGGACGCGTCGTTGCAGCAGCGGCTCCCAGCTCC...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR GCA 90 bp GCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCTGCCGGCCAGGGGAGAGGTTaGTGTCCTGGCGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: AGPVLLGHILEVGDHDPAGQGRG*CPGEET
Trigger: GGTCTCCTCGCCAGGACAGCAACCTCTCCCCTGGCC...GGCAGGGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp CTGTCACACTTGCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACAGGTTCCGTGCTCGGGTaGTTCGGCCAGGCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LSHLLACLWKRVPSSSGTGSVLG*FGQAVL
Trigger: GAGGACGGCCTGGCCGAAGCACCCGAGCACGGAACC...TGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAAGTGTGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCGGACACGGGTCCCCATaGTGGCCTCAGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCGHGSP*WPQLVE
Trigger: CTCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCC...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp TGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCACTGGTTGGGCAGCAGGAAGCGTGGATaGTGGCCTCCCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WQQEAWMLASLWPTHWLGSRKRG*WPPCGP
Trigger: TGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCT...GCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCGCAGGCTGCGCATGCTaGCACCCTTGGCCACGCCGG +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVAGCAC*HPWPRR
Trigger: CCGGCGTGGCCAAGGGTGCCAGCATGCGCAGCCTGC...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACACAGCAGCTCCTCATCTaGGGCGCAGCGGGCGACGGC +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTQQLLI*GAAGDG
Trigger: GCCGTCGCCCGCTGCGCCCCAGATGAGGAGCTGCTG...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGTGGGAGCTGCAGCCACGCTGCAGTTGGCCTaGGGTAGCAGGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: HRRLVGAKVLHLPVGAAATLQLA*GSRQHL
Trigger: CAGGTGCTGCCTGCTACCCCAGGCCAACTGCAGCGT...GGCTGCAGCTCCCACTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CTGGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCACTGCTGGTGGAGCTGTGTaGACGCTGCAGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGHGSRKRGCWPPCGPRTAGGAV*TLQLAW
Trigger: CCAGGCCAACTGCAGCGTCCACACAGCTCCACCAGC...AGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CCACGCACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCCCTGTTGGTGGCAGTaGACACGGGTCCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: PRTGWADLVASAQAACGCPCWWQ*TRVPML
Trigger: CAGCATGGGGACCCGTGTCCACTGCCACCAACAGGG...GCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCCCCGCAGGCCACCTTTaGGTGTTGCTAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPPAGHL*VLLAQP
Trigger: AGGCTGTGCTAGCAACACCCAAAGGTGGCCTGCGGG...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCGCCAGGTGGGTGCCATaGCTGTCACACTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCARWVP*LSHLLA
Trigger: GGCCAGCAAGTGTGACAGTCATGGCACCCACCTGGC...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp ACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTACGGTCACCTGCTCCTaGGGGGCCGGGATTCCATGC +
Preference number: 4 (lower is better)
Translates to: TGWADLVASAQAACGCQGTVTCS*GAGIPC
Trigger: GCATGGAATCCCGGCCCCTCAGGAGCAGGTGACCGT...ACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGGGTTCCGTGCTCGGGTaGTTCGGCCAGGCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVGSVLG*FGQAVL
Trigger: GAGGACGGCCTGGCCGAAGCACCCGAGCACGGAACC...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR GCA 90 bp AGCCAGTCAGGGTCCAGCCCTCCTCGCAGGCCACGGTCACCTGCTCCTGAGGGGGTCCTGCAAAACAGCTaGCAACCTGCCCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: SQSGSSPPRRPRSPAPEGVLQNS*QPAPWV
Trigger: CACCCATGGGGCAGGTTGGCAGCTGTTTTGCAGGAC...CCCCTCAGGAGCAGGTGACCGTGGCCTGCGAGGAGGGCTGGACCCTGACTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp CCTGACTACACACGTGTTGTCTACGGCGTAGGCCCCCAGGACGTGGGAGGTCCCGGACACGGGTCCCCATaGTGGCCTCAGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PDYTRVVYGVGPQDVGGPGHGSP*WPQLVE
Trigger: CTCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCC...GGGACCTCCCACGTCCTGGGGGCCTACGCCGTAGACAACACGTGTGTAGTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp CTGTCACACTTGCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACAACACCTCCACCAGGCTaGCTCCGTCTCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSHLLACLWKRVPSSSGTTPPPG*LRLRSS
Trigger: GCTGGAGCGGAGACGGAGGCAGCCTGGTGGAGGTGT...TGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAAGTGTGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGCGCAGCGGTGGAAGGTaGCTGTGGTTCCGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPRSGGR*LWFRAR
Trigger: CCGAGCACGGAACCACAGCCACCTTCCACCGCTGCG...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CCA 90 bp CTGTCACACTTGCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACACGCAGCGGTGGAAGGTaGCTGTGGTTCCGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LSHLLACLWKRVPSSSGTRSGGR*LWFRAR
Trigger: CCGAGCACGGAACCACAGCCACCTTCCACCGCTGCG...TGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAAGTGTGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACGTGGCCCTGTTGGTaGCAGTGGACACGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPTWPCW*QWTRVP
Trigger: GGGGACCCGTGTCCACTGCCACCAACAGGGCCACGT...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTACGTGGCCCTGTTGGTaGCAGTGGACACGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TGWADLVASAQAACGCQGTWPCW*QWTRVP
Trigger: GGGGACCCGTGTCCACTGCCACCAACAGGGCCACGT...ACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCAGGACGTGGCCCTGTTaGTGGCAGTGGACACGGGTC +
Preference number: 4 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCRTWPC*WQWTRV
Trigger: GACCCGTGTCCACTGCCACCAACAGGGCCACGTCCT...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCAGCACAGGCGGCTTGTaGGTGCCAAGGTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCSTGGL*VPRSST
Trigger: GGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGCT...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAGGCTCCGGCAGCAGATaGCAACGGCTGTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTGSGSR*QRLSRP
Trigger: GGGCCGTGACAGCCGTTGCCATCTGCTGCCGGAGCC...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCTTGCTTGGGTGGGGCTaGTGCTCAAGGAGGGACAGT +
Preference number: 4 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPLLGWG*CSRRDS
Trigger: ACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGGCTCAGACCCTGAACTaGACGGCGGCGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRAQTLN*TAAPAC
Trigger: GCAGGCGGGCGCCGCCGTTCAGTTCAGGGTCTGAGC...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR TCA 90 bp GCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGCCAGGTGGGTGCCATaGCTGTCACACTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AGLSVEAGPVLLGHILEVARWVP*LSHLLA
Trigger: GGCCAGCAAGTGTGACAGTCATGGCACCCACCTGGC...GACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACACCTTCCCTTGGCAGTTaGGCACGCGCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTPSLGS*ARAGCA
Trigger: TGCGCAGCCTGCGCGTGCTCAACTGCCAAGGGAAGG...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGCCTTCCCTTGGCAGTTaGGCACGCGCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVPSLGS*ARAGCA
Trigger: TGCGCAGCCTGCGCGTGCTCAACTGCCAAGGGAAGG...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTTCAACTCGGCCAGGGTaGGCTCCGGCTCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCSTRPG*APARQT
Trigger: TGTCTGCCGAGCCGGAGCTCACCCTGGCCGAGTTGA...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCTCAACTCGGCCAGGGTaGGCTCCGGCTCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVSTRPG*APARQT
Trigger: TGTCTGCCGAGCCGGAGCTCACCCTGGCCGAGTTGA...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp AGCCAGTCAGGGTCCAGCCCTCCTCGCAGGCCACGGTCACCTGCTCCTGAGGGGAGGCCCCGAGTGTGCTaGCCATACAGTCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SQSGSSPPRRPRSPAPEGRPRVC*PYSPAK
Trigger: TTTTGCAGGACTGTATGGTCAGCACACTCGGGGCCT...CCCCTCAGGAGCAGGTGACCGTGGCCTGCGAGGAGGGCTGGACCCTGACTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR TCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTCTCAGCCCCAGCCCTTaGCCCTCCCCAGACACCCAT +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCLSPSP*PSPDTH
Trigger: ATGGGTGTCTGGGGAGGGTCAAGGGCTGGGGCTGAG...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCCTCAGCCCCAGCCCTTaGCCCTCCCCAGACACCCAT +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVLSPSP*PSPDTH
Trigger: ATGGGTGTCTGGGGAGGGTCAAGGGCTGGGGCTGAG...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GCACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGTGGGAGCTGCAGCGAGCTAGGAAACCTGTaGGGACGTGGCCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: AQAACGCQGPPPPSGSCSELGNL*GRGPVG
Trigger: ACCAACAGGGCCACGTCCTCACAGGTTTCCTAGCTC...GCTGCAGCTCCCACTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp TGCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGCGCCTTGAGCCTTaGGGTGGGGAGGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: CWPVCGSGSRPPRAHSRSRRLEP*GGEDCA
Trigger: TGCACAGTCCTCCCCACCGCAAGGCTCAAGGCGCCG...ACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp CTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACGTGGCTGTGGTTCCGTaGTCGGGTGCTTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSVEAGPVLLGHILEVGDVAVVP*SGASAR
Trigger: CCTGGCCGAAGCACCCGAGCACGGAACCACAGCCAC...GTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp GCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCTGCCCCCCTGCCAGGTGGGTaGCATGACTGTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: AGPVLLGHILEVGDHDPAPLPGG*HDCHTC
Trigger: GCAAGTGTGACAGTCATGGCACCCACCTGGCAGGGG...GGCAGGGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGCAGGCGGCTTGTGGGTaGCAAGGTCCTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGQAACG*QGPPPP
Trigger: GGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTG...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGTCCCAGGGAGGGCACTaGAGCCAGTCAGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGSQGGH*SQSGSS
Trigger: GCTGGACCCTGACTGGCTGCAGTGCCCTCCCTGGGA...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCGTGCCCTTCCCTTaGCAGTTGAGCACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPTVPFP*QLSTRR
Trigger: CCTGCGCGTGCTCAACTGCCAAGGGAAGGGCACGGT...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCGTCACCGGCTGGTCTTaGGCATTGGTGGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCVTGWS*ALVAPT
Trigger: AGTTGGGGCCACCAATGCCCAAGACCAGCCGGTGAC...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGGGCGGCCACCAGGTTaGGGGTCAGTACCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPGRPPG*GSVPAG
Trigger: ACCAGCGGGTACTGACCCCCAACCTGGTGGCCGCCC...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GACCTGGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCCACTCCTGGAGAAACTaGAGCAGCTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DLGHGSRKRGCWPPCGPRHSWRN*SSSAAP
Trigger: AGGAGCTGCTGAGCTGCTCCAGTTTCTCCAGGAGTG...GCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp ACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTCCCCCAAAAGCGTTGTaGGCCCGGCAGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TGWADLVASAQAACGCQGPPKAL*ARQTSL
Trigger: CAAGCTGGTCTGCCGGGCCCACAACGCTTTTGGGGG...ACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CCACGCACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCGTAGCAGGCAGCACCTaGCAATGGCGTAGACACCCT +
Preference number: 4 (lower is better)
Translates to: PRTGWADLVASAQAACGCVAGST*QWRRHP
Trigger: AGGGTGTCTACGCCATTGCCAGGTGCTGCCTGCTAC...GCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CCTGACTACACACGTGTTGTCTACGGCGTAGGCCCCCAGGACGTGGGAGGTCCCTGTGGACGCTGCAGTTaGCCTGGGGTAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PDYTRVVYGVGPQDVGGPCGRCS*PGVAGS
Trigger: GCTGCCTGCTACCCCAGGCCAACTGCAGCGTCCACA...GGGACCTCCCACGTCCTGGGGGCCTACGCCGTAGACAACACGTGTGTAGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGGCTGGTGGAGCTGTGTaGACGCTGCAGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPAGGAV*TLQLAW
Trigger: CCAGGCCAACTGCAGCGTCCACACAGCTCCACCAGC...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGGGCCCACGCACTGGTTaGGCTGACCTCGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGGPRTG*ADLVAS
Trigger: TGAGGCCACGAGGTCAGCCCAACCAGTGCGTGGGCC...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCTTCGCTGGTGCTGCCTGTAGTGCTGACGTCCCGGCTCCTGACTACACACGTGGGCCCACGCACTGGTTaGGCTGACCTCGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PSLVLPVVLTSRLLTTHVGPRTG*ADLVAS
Trigger: TGAGGCCACGAGGTCAGCCCAACCAGTGCGTGGGCC...CACGTGTGTAGTCAGGAGCCGGGACGTCAGCACTACAGGCAGCACCAGCGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAAGGAAGCGTGGATGCTaGCCTCCCTGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTRKRGC*PPCGPR
Trigger: GCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCT...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTTGGCAGCAGGAAGCGTaGATGCTGGCCTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TGWADLVASAQAACGCQGWQQEA*MLASLW
Trigger: CCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCA...ACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGTGTCACTGGAGCTCCTaGGAGGCCTGCGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGCHWSS*EACARC
Trigger: GCACCTGGCGCAGGCCTCCCAGGAGCTCCAGTGACA...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACATGTCACTGGAGCTCCTaGGAGGCCTGCGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTCHWSS*EACARC
Trigger: GCACCTGGCGCAGGCCTCCCAGGAGCTCCAGTGACA...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCGGATGGGGCTGTCACTaGAGCTCCTGGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVGWGCH*SSWEAC
Trigger: GCAGGCCTCCCAGGAGCTCCAGTGACAGCCCCATCC...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAGGATGGGGCTGTCACTaGAGCTCCTGGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTGWGCH*SSWEAC
Trigger: GCAGGCCTCCCAGGAGCTCCAGTGACAGCCCCATCC...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCCCAGACACCCATCCTaGGATGGGGCTGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCPRHPS*DGAVTG
Trigger: TCCAGTGACAGCCCCATCCCAGGATGGGTGTCTGGG...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACACCTGGCACCTCCACCTaGGGAGGAGGCACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTPGTST*GGGTQS
Trigger: ACTCTGGGTGCCTCCTCCCCAGGTGGAGGTGCCAGG...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAAGGGAGGGAGCTTCCTaGCACCTCCACCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTREGAS*HLHLGR
Trigger: CCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCT...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCTGCCCTCGATTGGGTGCTTGACGCCTaGGGCGCGCAGATCACGCCA +
Preference number: 4 (lower is better)
Translates to: PVLLGHILEVGDHDPALDWVLDA*GAQITP
Trigger: TGGCGTGATCTGCGCGCCCCAGGCGTCAAGCACCCA...ATCGAGGGCAGGGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAGGACTGTGCAGGAGCTaGAGTTCAGGAGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTGLCRS*SSGAGR
Trigger: GCGCCCTGCTCCTGAACTTCAGCTCCTGCACAGTCC...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR TCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGCGCTGGAGGCACCAATaGTGTCCTCCCCTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVRWRHQ*CPPLGQ
Trigger: TTGCCCCAGGGGAGGACATCATTGGTGCCTCCAGCG...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGGAGCTGCAGCCTGTaGGGACGTGGCCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPGSCSL*GRGPVG
Trigger: ACCAACAGGGCCACGTCCTCACAGGCTGCAGCTCCC...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCTCAGTTCCTGCTGTGTaGGCTTGGCAGGCACGCCCC +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVSVPAV*AWQARP
Trigger: GGGGCGTGCCTGCCAAGCTCACACAGCAGGAACTGA...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp AGCCAGTCAGGGTCCAGCCCTCCTCGCAGGCCACGGTCACCTGCTCCTGAGGGGAAGCCAGCTCAGATGTaGAATGCTGGGATGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SQSGSSPPRRPRSPAPEGKPAQM*NAGMLR
Trigger: ACGGAGCATCCCAGCATTTCACATCTGAGCTGGCTT...CCCCTCAGGAGCAGGTGACCGTGGCCTGCGAGGAGGGCTGGACCCTGACTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp AATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGTGGCTGTGGTTCCGTaGTCGGGTGCTTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NGEMPHSEGGSFLAPPPGVAVVP*SGASAR
Trigger: CCTGGCCGAAGCACCCGAGCACGGAACCACAGCCAC...CCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR GCA 90 bp GTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGCAGGCGGCGGGCAGTaGGCTCTGACTGCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VGDHDPALDFPVVTLYAGAGGGQ*ALTARG
Trigger: ACCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGC...ACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp ACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTGAGCTGTGTGGACGCTaGAGTTGGCCTGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: TGWADLVASAQAACGCQGELCGR*SWPGVA
Trigger: TGCTACCCCAGGCCAACTGCAGCGTCCACACAGCTC...ACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGACACGGGTCCCCATaGTGGCCTCAGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPGHGSP*WPQLVE
Trigger: CTCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCC...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGCAGGAAGCGTGGATaGTGGCCTCCCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGSRKRG*WPPCGP
Trigger: TGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCT...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CCACGCACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCGGGGCCGGGATTCCATaGTCCTTGACTTTGCATTCC +
Preference number: 4 (lower is better)
Translates to: PRTGWADLVASAQAACGCGAGIP*SLTLHS
Trigger: GGAATGCAAAGTCAAGGAGCATGGAATCCCGGCCCC...GCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp AATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGTCCCAGGGAGGGCACTaGAGCCAGTCAGGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NGEMPHSEGGSFLAPPPGSQGGH*SQSGSS
Trigger: GCTGGACCCTGACTGGCTGCAGTGCCCTCCCTGGGA...CCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AGCCAGTCAGGGTCCAGCCCTCCTCGCAGGCCACGGTCACCTGCTCCTGAGGGGTGTGAAATGCTGGGATaGTCCGTCTCCAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SQSGSSPPRRPRSPAPEGCEMLG*SVSSAH
Trigger: ATGGGCACTGGAGACGGAGCATCCCAGCATTTCACA...CCCCTCAGGAGCAGGTGACCGTGGCCTGCGAGGAGGGCTGGACCCTGACTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp TGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGGCGCCTCGACGTCGCTaGGGAAACCTTCTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: WPVCGSGSRPPRAHSRSRAPRRR*GNLLGC
Trigger: ACACCCTAGAAGGTTTCCGCAGCGACGTCGAGGCGC...CCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGATCCTGGCAGTGCTCTaGTCGCCCTTCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGILAVL*SPFLGL
Trigger: GAGGCCGAGGAAGGGCGAGCAGAGCACTGCCAGGAT...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS-3UTR CCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGGCCAGTCTCACTGCCTaGCTCACTCCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPASLTA*LTPPGS
Trigger: TGAGCCTGGAGGAGTGAGCCAGGCAGTGAGACTGGC...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CCA 90 bp TGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGGAGAGGTTGCTGTCCTaGCGAGGAGACCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: WPVCGSGSRPPRAHSRSRERLLS*RGDLEA
Trigger: GGCCTCTAGGTCTCCTCGCCAGGACAGCAACCTCTC...CCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTACCTCCACGGATCCTTaGCGCAGCGGTGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCTSTDP*RSGGRW
Trigger: CCACCTTCCACCGCTGCGCCAAGGATCCGTGGAGGT...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCTTGCTGGCCTGTCTGTaGAAGCGGGTCCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVLLACL*KRVPSS
Trigger: GGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAA...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTCCCAGGGTCACCGGCTaGTCTTGGGCATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPPRVTG*SWALVA
Trigger: GGCCACCAATGCCCAAGACCAGCCGGTGACCCTGGG...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCCCCCCAAAAGCGTTGTaGGCCCGGCAGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVPPKAL*ARQTSL
Trigger: CAAGCTGGTCTGCCGGGCCCACAACGCTTTTGGGGG...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGGGCAGCACCTGGCAATaGCGTAGACACCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVGSTWQ*RRHPHP
Trigger: GGGGTGAGGGTGTCTACGCCATTGCCAGGTGCTGCC...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GGCCACGGTCACCTGCTCCTGAGGGGCCGGGATTCCATGCTCCTTGACTTTGCAGGCAGCACCTGGCAATaGCGTAGACACCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: GHGHLLLRGRDSMLLDFAGSTWQ*RRHPHP
Trigger: GGGGTGAGGGTGTCTACGCCATTGCCAGGTGCTGCC...TGCAAAGTCAAGGAGCATGGAATCCCGGCCCCTCAGGAGCAGGTGACCGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp CCTTCGCTGGTGCTGCCTGTAGTGCTGACGTCCCGGCTCCTGACTACACACGTGAGGACGTGGCCCTGTTaGTGGCAGTGGACACGGGTC +
Preference number: 4 (lower is better)
Translates to: PSLVLPVVLTSRLLTTHVRTWPC*WQWTRV
Trigger: GACCCGTGTCCACTGCCACCAACAGGGCCACGTCCT...CACGTGTGTAGTCAGGAGCCGGGACGTCAGCACTACAGGCAGCACCAGCGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCTGGCAGCAGGAAGCGTaGATGCTGGCCTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVWQQEA*MLASLW
Trigger: CCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCA...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTCCTCGTGCCAGGCCATaGAGGGCTGAGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCPRARP*RAERGT
Trigger: TGTCCCTCTCTCAGCCCTCCATGGCCTGGCACGAGG...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCCCTGTCTCCAGCCTCTaGCTAGATGCCATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPPVSSL*LDAIQK
Trigger: TTTCTGGATGGCATCTAGCCAGAGGCTGGAGACAGG...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCACTGGTTGGGCTGACAAACCTGTGAGGACGTaGCCCTGTTGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SRKRGCWPPCGPRTGWADKPVRT*PCWWQW
Trigger: CCACTGCCACCAACAGGGCCACGTCCTCACAGGTTT...GTCAGCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR TCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCCAGGAGCAGGGCGCGTaGAGGGGCGCGCGGAATCCT +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTQEQGA*RGARNP
Trigger: AGGATTCCGCGCGCCCCTTCACGCGCCCTGCTCCTG...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR TCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGAGTTGCCGGCAGCGGTaGCCAGCACGACCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQSCRQR*PARPQP
Trigger: GGGCTGGGGTCGTGCTGGTCACCGCTGCCGGCAACT...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAACGCACTGGTTGGGCTaGCCTCGTGGCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPTHWLG*PRGLST
Trigger: TGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGT...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp AATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGTCAGTTCCTGCTGTGTaGGCTTGGCAGGCACGCCCC +
Preference number: 4 (lower is better)
Translates to: NGEMPHSEGGSFLAPPPGSVPAV*AWQARP
Trigger: GGGGCGTGCCTGCCAAGCTCACACAGCAGGAACTGA...CCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAGCACCACCACGTAGGTaGCAGGCAACCTCCACGGAT +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTAPPRR*QATSTD
Trigger: ATCCGTGGAGGTTGCCTGGCACCTACGTGGTGGTGC...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGGTCCTGCAAAACAGCTaGCAACCTGCCCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPVLQNS*QPAPWV
Trigger: CACCCATGGGGCAGGTTGGCAGCTGTTTTGCAGGAC...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCCTGACCATACAGTCCTaGAAAACAGCTGCCAACCTG +
Preference number: 4 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPLTIQS*KTAANL
Trigger: CAGGTTGGCAGCTGTTTTGCAGGACTGTATGGTCAG...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGGAGGCCTGCGCCAGGTaGCGGCTCCGGCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQEACAR*RLRQQM
Trigger: CATCTGCTGCCGGAGCCGGCACCTGGCGCAGGCCTC...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTCCTCCACGGATCCTGTaGCGCGGCGAGGCAGAAACT +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPPPRIL*RGEAET
Trigger: AGTTTCTGCCTCGCCGCGGCACAGGATCCGTGGAGG...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS-3UTR CCA 90 bp GAAGTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGCGCGGAATCCTGGCTaGGAGCTGGGAGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: EVGDHDPALDFPVVTLYAARNPG*ELGAAA
Trigger: AGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGC...AGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGGGCGCGCGGAATCCTaGCTGGGAGCTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLGRAES*LGAGSR
Trigger: GCGGCTCCCAGCTCCCAGCCAGGATTCCGCGCGCCC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTGAGAGGTTGCTGTCCTaGCGAGGAGACCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCERLLS*RGDLEA
Trigger: GGCCTCTAGGTCTCCTCGCCAGGACAGCAACCTCTC...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CCA 90 bp AATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGATCCGCCCGGTACCGTaGAGGGGTAATCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NGEMPHSEGGSFLAPPPGIRPVP*RGNPLQ
Trigger: CTGGAGCGGATTACCCCTCCACGGTACCGGGCGGAT...CCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAATCCGCCCGGTACCGTaGAGGGGTAATCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPIRPVP*RGNPLQ
Trigger: CTGGAGCGGATTACCCCTCCACGGTACCGGGCGGAT...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCTGCCCTCGGACTGTCACACTTGCTaGCCTGTCTGTGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: VPSSSGTFSKSVTMTLPSDCHTC*PVCGSG
Trigger: CCCGCTTCCACAGACAGGCCAGCAAGTGTGACAGTC...CGAGGGCAGGGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGGCATGCTGGCACCCTTaGCCACGCCGGCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQACWHP*PRRHPG
Trigger: GCCGGGATGCCGGCGTGGCCAAGGGTGCCAGCATGC...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCGCAGGCTGCGCATGCTaGCACCCTTGGCCACGCCGG +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTAGCAC*HPWPRR
Trigger: CCGGCGTGGCCAAGGGTGCCAGCATGCGCAGCCTGC...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACACACAGCGGCCAAAGTTaGTCCCCAAAGTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTHSGQS*SPKSPG
Trigger: CCCTGGGGACTTTGGGGACCAACTTTGGCCGCTGTG...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGGCAATGCCAGCCACGTaGGCAGCAGCCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVAMPAT*AAACDV
Trigger: GACATCACAGGCTGCTGCCCACGTGGCTGGCATTGC...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGGCAATGCCAGCCACGTaGGCAGCAGCCTGTGATGTC +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGAMPAT*AAACDV
Trigger: GACATCACAGGCTGCTGCCCACGTGGCTGGCATTGC...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGCATGCTGGCCTCAGCTaGTGGAGCTGTGTGGACGCT +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGHAGLS*WSCVDA
Trigger: AGCGTCCACACAGCTCCACCAGCTGAGGCCAGCATG...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGCCCTGTTGGTGGCAGTaGACACGGGTCCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: NGEMPHSEGGSFLAPPPGPCWWQ*TRVPML
Trigger: CAGCATGGGGACCCGTGTCCACTGCCACCAACAGGG...CCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTTGGGCTGACCTCGTaGCCTCAGCACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPVGLTS*PQHRRL
Trigger: AAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAAC...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCTCCAGACCTGGGGCATaGCAGCAGGAAGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVSRPGA*QQEAWM
Trigger: CATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGA...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGGGCTCCGGCAGCAGATaGCAACGGCTGTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: WEESCLLGGDLRIECLARGSGSR*QRLSRP
Trigger: GGGCCGTGACAGCCGTTGCCATCTGCTGCCGGAGCC...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGAGGGAGGGAGCTTCCTaGCACCTCCACCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRREGAS*HLHLGR
Trigger: CCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCT...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGCACATTGGGAGCAGCTaGCAGCACCCGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVHIGSS*QHPSTA
Trigger: AGCTGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTG...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCCACATTGGGAGCAGCTaGCAGCACCCGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVHIGSS*QHPSTA
Trigger: AGCTGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTG...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGCGGACATCGGCACATTaGGAGCAGCTGGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: NGEMPHSEGGSFLAPPPGRTSAH*EQLAAP
Trigger: GGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCG...CCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGCCCGCAGGCCACCTTTaGGTGTTGCTAGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGPAGHL*VLLAQP
Trigger: AGGCTGTGCTAGCAACACCCAAAGGTGGCCTGCGGG...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGAGGAGGGACAGTTGTTaGCCCTCTCCCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVRRDSC*PSPPTM
Trigger: CATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCT...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCAGGAGGGACAGTTGTTaGCCCTCTCCCCCGACCATG +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVRRDSC*PSPPTM
Trigger: CATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCT...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTCTGCGCCAGCGGAAATaGCCTGGCCCTGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: VTMTLPSISRWSLCMLVSLRQRK*PGPGTP
Trigger: CGGGGTTCCAGGGCCAGGCCATTTCCGCTGGCGCAG...AGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp GTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGGACTGTGCAGGAGCTaGAGTTCAGGAGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: VGDHDPALDFPVVTLYAGGLCRS*SSGAGR
Trigger: GCGCCCTGCTCCTGAACTTCAGCTCCTGCACAGTCC...ACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp ATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTAGGAGAGCGGGCAGTGCGCTCTaGCTGCGAGAGGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: MTLPSISRWSLCMLVSRRAGSAL*LREVGL
Trigger: GAGACCCACCTCTCGCAGTCAGAGCGCACTGCCCGC...TCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCGGGCAGTGCGCTCTaGCTGCGAGAGGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLAGSAL*LREVGL
Trigger: GAGACCCACCTCTCGCAGTCAGAGCGCACTGCCCGC...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCTGGCAGGCGGCGTTaGGGACGCGGCTGTACCCAC +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLAGRRR*GRGCTH
Trigger: GTGGGTACAGCCGCGTCCTCAACGCCGCCTGCCAGC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGGCACCCAGAGTGAGTaGGTTCCAGGCAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPGTQSE*VPGKEA
Trigger: AGCCTCCTTGCCTGGAACTCACTCACTCTGGGTGCC...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCCCAAGGCACAGCCTGTaGCCACCAGGGGCGCACCTG +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTPRHSL*PPGAHL
Trigger: CAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGG...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp TGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTAGGAGATACACCTGCCCGCCTGCAACCATaGGCGCCTCGACGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: CPRFPGGHSVCWCLGDTPARLQP*APRRRC
Trigger: GCAGCGACGTCGAGGCGCTCATGGTTGCAGGCGGGC...AGGTGTATCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCAGGCGGCGGGCAGTaGGCTCTGACTGCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLAGGGQ*ALTARG
Trigger: ACCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGC...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp TGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCCAGGTTCCACGGGATaGTCTGGGCAAAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: WKRVPSSSGTFSKSVTMTPGSTG*SGQRQR
Trigger: CCTCTGTCTTTGCCCAGAGCATCCCGTGGAACCTGG...GGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCGGTGGTCACTCTGTATaGTGGTGTCTAGGAGATACA +
Preference number: 4 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPGGHSV*WCLGDT
Trigger: TGTATCTCCTAGACACCAGCATACAGAGTGACCACC...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCACCCCTGCCAGGTGGGTaGCATGACTGTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPPLPGG*HDCHTC
Trigger: GCAAGTGTGACAGTCATGGCACCCACCTGGCAGGGG...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCAGACAGCATCATGGCTaGAATGCCAGCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVRQHHG*NASHVG
Trigger: GCCCACGTGGCTGGCATTGCAGCCATGATGCTGTCT...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGACAGCATCATGGCTaGAATGCCAGCCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGRQHHG*NASHVG
Trigger: GCCCACGTGGCTGGCATTGCAGCCATGATGCTGTCT...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CTGGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCACGCACTCTGACCATACAGTCCTaGAAAACAGCTGCCAACCTG +
Preference number: 4 (lower is better)
Translates to: LGHGSRKRGCWPPCGPRTLTIQS*KTAANL
Trigger: CAGGTTGGCAGCTGTTTTGCAGGACTGTATGGTCAG...AGTGCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGCCCGGCAGACCAGCTTaGCCCCTTGGGCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLPGRPA*PLGPPC
Trigger: GCATGGAGGCCCAAGGGGGCAAGCTGGTCTGCCGGG...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGCCCGGCAGACCAGCTTaGCCCCTTGGGCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQPGRPA*PLGPPC
Trigger: GCATGGAGGCCCAAGGGGGCAAGCTGGTCTGCCGGG...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp ATTCCATGCTCCTTGACTTTGCATTCCAGACCTGGGGCATGGCAGCAGGAAGCGCCCGGCAGACCAGCTTaGCCCCTTGGGCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: IPCSLTLHSRPGAWQQEAPGRPA*PLGPPC
Trigger: GCATGGAGGCCCAAGGGGGCAAGCTGGTCTGCCGGG...CGCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR GCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGAGCAGGAAGCGTGGATaGTGGCCTCCCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRSRKRG*WPPCGP
Trigger: TGGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCT...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTAACGATGTTTGTCCCTaGAGCCCCTACCGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPNDVCP*SPYRPL
Trigger: GAGGGGGCGGTAGGGGCTGCAGGGACAAACATCGTT...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCGCGCGGAATCCTGGCTaGGAGCTGGGAGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTARNPG*ELGAAA
Trigger: AGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGC...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGCAGCAGCAGCAGCAGTaGCAGCGGCCACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLQQQQQ*QRPPGP
Trigger: CGGTCCTGGTGGCCGCTGCCACTGCTGCTGCTGCTG...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CCA 90 bp CCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTAGGAGATACACAGCAGCAGCAGCAGTaGCAGCGGCCACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: PCPRFPGGHSVCWCLGDTQQQQQ*QRPPGP
Trigger: CGGTCCTGGTGGCCGCTGCCACTGCTGCTGCTGCTG...TGTATCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTGACTGTCACACTTGCTaGCCTGTCTGTGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCDCHTC*PVCGSG
Trigger: CCCGCTTCCACAGACAGGCCAGCAAGTGTGACAGTC...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCACCGGCTGGTCTTaGGCATTGGTGGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPVTGWS*ALVAPT
Trigger: AGTTGGGGCCACCAATGCCCAAGACCAGCCGGTGAC...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGGGGCGGCCACCAGGTTaGGGGTCAGTACCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: ESCLLGGDLRIECLARNKGRPPG*GSVPAG
Trigger: ACCAGCGGGTACTGACCCCCAACCTGGTGGCCGCCC...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGACCAGCTTGCCCCCTTaGGCCTCCATGCGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLTSLPP*ASMRSP
Trigger: GGGCGAGCGCATGGAGGCCCAAGGGGGCAAGCTGGT...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGACCAGCTTGCCCCCTTaGGCCTCCATGCGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: ESCLLGGDLRIECLARNKTSLPP*ASMRSP
Trigger: GGGCGAGCGCATGGAGGCCCAAGGGGGCAAGCTGGT...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGCCCCCAAAAGCGTTGTaGGCCCGGCAGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRPPKAL*ARQTSL
Trigger: CAAGCTGGTCTGCCGGGCCCACAACGCTTTTGGGGG...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTGTAGCAGGCAGCACCTaGCAATGGCGTAGACACCCT +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCVAGST*QWRRHP
Trigger: AGGGTGTCTACGCCATTGCCAGGTGCTGCCTGCTAC...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGTGTGGACGCTGCAGTTaGCCTGGGGTAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRCGRCS*PGVAGS
Trigger: GCTGCCTGCTACCCCAGGCCAACTGCAGCGTCCACA...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAGGAAGCGTGGATGCTaGCCTCCCTGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: WEESCLLGGDLRIECLARRKRGC*PPCGPR
Trigger: GCGTGGGCCACAGGGAGGCCAGCATCCACGCTTCCT...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TCCAGACCTGGGGCATGGCAGCAGGAAGCGTGGATGCTGGCCTCCCTGTGGCCCTCAGATGTGAAATGCTaGGATGCTCCGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SRPGAWQQEAWMLASLWPSDVKC*DAPSPV
Trigger: CACTGGAGACGGAGCATCCCAGCATTTCACATCTGA...GGGCCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp TTCGCTGGTGCTGCCTGTAGTGCTGACGTCCCGGCTCCTGACTACACACGTGTTGTGGGAGCTGCAGCCTaGGGCAGAGGAAAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FAGAACSADVPAPDYTRVVGAAA*GRGKPA
Trigger: AGCTGGCTTTCCTCTGCCCCAGGCTGCAGCTCCCAC...AACACGTGTGTAGTCAGGAGCCGGGACGTCAGCACTACAGGCAGCACCAGCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
3UTR CAA 72 bp GCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTaGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: AWVGLVLKEGQL*ALSPDHALEAS
Trigger: AGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
3UTR CAA 72 bp CTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTaGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LAWVGLVLKEGQ*LALSPDHALEA
Trigger: TGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCGGGCAGTGCGCTCTaGCTGCGAGAGGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLAGSAL*LREVGL
Trigger: GAGACCCACCTCTCGCAGTCAGAGCGCACTGCCCGC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GAAGTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTCATGCAGGATCTTGGTaGGGTATCCCCGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EVGDHDPALDFPVVTLYAHAGSW*GIPGGQ
Trigger: CTGCCCGCCGGGGATACCTCACCAAGATCCTGCATG...AGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGCATGCAGGATCTTGGTaGGGTATCCCCGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WEESCLLGGDLRIECLARHAGSW*GIPGGQ
Trigger: CTGCCCGCCGGGGATACCTCACCAAGATCCTGCATG...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGCCCCGAGTGTGCTaGCCATACAGTCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGRPRVC*PYSPAK
Trigger: TTTTGCAGGACTGTATGGTCAGCACACTCGGGGCCT...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGACGGTCACCTGCTCCTaGGGGGCCGGGATTCCATGC +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLTVTCS*GAGIPC
Trigger: GCATGGAATCCCGGCCCCTCAGGAGCAGGTGACCGT...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGTGGAGACCTGAGGATTaGATGCCTGGCACGGAACAA +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPWRPED*MPGTEQ
Trigger: TTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCA...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGTCCTTGGTGGAGACCTaGGGATTGAATGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVSLVET*GLNAWH
Trigger: GTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGA...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGGGCCAGGGGAGAGGTTaGTGTCCTGGCGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLGQGRG*CPGEET
Trigger: GGTCTCCTCGCCAGGACAGCAACCTCTCCCCTGGCC...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR GCA 90 bp CGGTGGTCACTCTGTATGCTGGTGTCTAGGAGATACACCTCCACCAGGCTGCCTGCAGTGCGCTCTGACTaGGAGAGGTGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RWSLCMLVSRRYTSTRLPAVRSD*ERWVSS
Trigger: GGAGGAGACCCACCTCTCGCAGTCAGAGCGCACTGC...AGGCAGCCTGGTGGAGGTGTATCTCCTAGACACCAGCATACAGAGTGACCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGGCCGCTGACCACCCCTaGCAGGTGGGTGCCATGACT +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLAADHP*QVGAMT
Trigger: AGTCATGGCACCCACCTGGCAGGGGTGGTCAGCGGC...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCAAGTGGATCAGTCTCTaGCTCAACTCGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVKWISL*LNSARV
Trigger: CACCCTGGCCGAGTTGAGGCAGAGACTGATCCACTT...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGCAGGCGGCTTGTGGGTaGCAAGGTCCTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQQAACG*QGPPPP
Trigger: GGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTG...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGAGCTCCTGGGAGGCCTaGGCCAGGTGCCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLSSWEA*ARCRLR
Trigger: CCGGAGCCGGCACCTGGCGCAGGCCTCCCAGGAGCT...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGCTGCAGGCATCGTTCTaGCATCACTCACCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVLQASF*HHSPSF
Trigger: GAAGCTCGGTGAGTGATGGCAGAACGATGCCTGCAG...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTCTGCAGGCATCGTTCTaGCATCACTCACCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCLQASF*HHSPSF
Trigger: GAAGCTCGGTGAGTGATGGCAGAACGATGCCTGCAG...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACACCCTCGATTTCCCGGTaGTCACTCTGTATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTPSISR*SLCMLV
Trigger: CACCAGCATACAGAGTGACCACCGGGAAATCGAGGG...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTAGGTTGCTGGCCTGTCTGTaGAAGCGGGTCCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TMTLPSISRWSLCMLVSRLLACL*KRVPSS
Trigger: GGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAA...CCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGCCCAGGGTCACCGGCTaGTCTTGGGCATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ESCLLGGDLRIECLARNKPRVTG*SWALVA
Trigger: GGCCACCAATGCCCAAGACCAGCCGGTGACCCTGGG...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTCGGCAGACAGCATCATaGCTGCAATGCCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPRQTAS*LQCQPR
Trigger: ACGTGGCTGGCATTGCAGCCATGATGCTGTCTGCCG...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGCACTCCTGGAGAAACTaGAGCAGCTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVHSWRN*SSSAAP
Trigger: AGGAGCTGCTGAGCTGCTCCAGTTTCTCCAGGAGTG...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TTCGCTGGTGCTGCCTGTAGTGCTGACGTCCCGGCTCCTGACTACACACGTGTTCATGCTGGCCTCAGCTaGTGGAGCTGTGTGGACGCT +
Preference number: 4 (lower is better)
Translates to: FAGAACSADVPAPDYTRVHAGLS*WSCVDA
Trigger: AGCGTCCACACAGCTCCACCAGCTGAGGCCAGCATG...AACACGTGTGTAGTCAGGAGCCGGGACGTCAGCACTACAGGCAGCACCAGCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGATGCTGGCCTCCCTGTaGCCCACGCACTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLMLASL*PTHWLG
Trigger: GCCCAACCAGTGCGTGGGCCACAGGGAGGCCAGCAT...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CTGCTCCTGAGGGGCCGGGATTCCATGCTCCTTGACTTTGCATTCCAGACCTGGTCCAGACCTGGGGCATaGCAGCAGGAAGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: LLLRGRDSMLLDFAFQTWSRPGA*QQEAWM
Trigger: CATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGA...CCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCCCGGCCCCTCAGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp TCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCTGCCCTCGATTTCCCGGAAACCTTCTAGGGTGTaGGTGCTTGACGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSGTFSKSVTMTLPSISRKPSRV*VLDAWG
Trigger: GCCCCAGGCGTCAAGCACCCACACCCTAGAAGGTTT...CCGGGAAATCGAGGGCAGGGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR TCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGCGCTGGAGGCACCAATaGTGTCCTCCCCTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: ESCLLGGDLRIECLARNKRWRHQ*CPPLGQ
Trigger: TTGCCCCAGGGGAGGACATCATTGGTGCCTCCAGCG...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGGGAGCTGCAGCCTGTaGGGACGTGGCCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLGSCSL*GRGPVG
Trigger: ACCAACAGGGCCACGTCCTCACAGGCTGCAGCTCCC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCACGCACTGGTTGGGCTaGCCTCGTGGCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTTHWLG*PRGLST
Trigger: TGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGT...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGACGGTCACCTGCTCCTaGGGGGCCGGGATTCCATGC +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLTVTCS*GAGIPC
Trigger: GCATGGAATCCCGGCCCCTCAGGAGCAGGTGACCGT...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTTGGAGACCTGAGGATTaGATGCCTGGCACGGAACAA +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCWRPED*MPGTEQ
Trigger: TTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCA...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GAAGTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGCACCACCACGTAGGTaGCAGGCAACCTCCACGGAT +
Preference number: 4 (lower is better)
Translates to: EVGDHDPALDFPVVTLYAAPPRR*QATSTD
Trigger: ATCCGTGGAGGTTGCCTGGCACCTACGTGGTGGTGC...AGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGCAGGCGGCGGGCAGTaGGCTCTGACTGCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKEAGGGQ*ALTARG
Trigger: ACCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGC...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCTGCATGACTGTCACACTTaGTGGCCTGTCTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KRVPSSSGTFSKSVTMTLHDCHT*WPVCGS
Trigger: GCTTCCACAGACAGGCCAGCAAGTGTGACAGTCATG...CAGGGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCCATGACTGTCACACTTaGTGGCCTGTCTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVHDCHT*WPVCGS
Trigger: GCTTCCACAGACAGGCCAGCAAGTGTGACAGTCATG...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCGCTGACCACCCCTaGCAGGTGGGTGCCATGACT +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLAADHP*QVGAMT
Trigger: AGTCATGGCACCCACCTGGCAGGGGTGGTCAGCGGC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAACACAAAGCAGGTGCTaGAGTCGCTGGAGGCACCAA +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPTQSRC*SRWRHQ
Trigger: TTGGTGCCTCCAGCGACTGCAGCACCTGCTTTGTGT...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGGCATCATGGCTGCAATaGCAGCCACGTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WEESCLLGGDLRIECLARASWLQ*QPRGQQ
Trigger: CTGCTGCCCACGTGGCTGGCATTGCAGCCATGATGC...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCACCATGGGAAGAATCCTaGCTCCTTGGTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPPWEES*LLGGDL
Trigger: CAGGTCTCCACCAAGGAGGCAGGATTCTTCCCATGG...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp TGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTAGGAGATACACCTCTTCTAGGGTGTGGGTaGTTGACGCCTGGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: CPRFPGGHSVCWCLGDTPLLGCG*LTPGAR
Trigger: GCGCGCCCCAGGCGTCAAGCACCCACACCCTAGAAG...AGGTGTATCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp GAAGTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGGAAGGTGGCTGTaGTTCCGTGCTCGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: EVGDHDPALDFPVVTLYAGGRWL*FRARVL
Trigger: AAGCACCCGAGCACGGAACCACAGCCACCTTCCACC...AGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp ATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTAGGAGAACCTCCACGGATCCTTaGCGCAGCGGTGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: MTLPSISRWSLCMLVSRRTSTDP*RSGGRW
Trigger: CCACCTTCCACCGCTGCGCCAAGGATCCGTGGAGGT...TCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGTCTGACTGCGAGAGGTaGGTCTCCTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRSDCER*VSSFST
Trigger: GGTGCTGAAGGAGGAGACCCACCTCTCGCAGTCAGA...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCTGCCCTCGCCAGGAAGAAGGCCATaGAAGACATGCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: VPSSSGTFSKSVTMTLPSPGRRP*KTCRIL
Trigger: CAAGATCCTGCATGTCTTCCATGGCCTTCTTCCTGG...CGAGGGCAGGGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp ATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTAGGAGAATCCGCCCGGTACCGTaGAGGGGTAATCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: MTLPSISRWSLCMLVSRRIRPVP*RGNPLQ
Trigger: CTGGAGCGGATTACCCCTCCACGGTACCGGGCGGAT...TCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGTTGCTGGCCTGTCTGTaGAAGCGGGTCCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQLLACL*KRVPSS
Trigger: GGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAA...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGGACTGTCACACTTGCTaGCCTGTCTGTGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRDCHTC*PVCGSG
Trigger: CCCGCTTCCACAGACAGGCCAGCAAGTGTGACAGTC...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGGCATGCTGGCACCCTTaGCCACGCCGGCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLACWHP*PRRHPG
Trigger: GCCGGGATGCCGGCGTGGCCAAGGGTGCCAGCATGC...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGACCGTGCCCTTCCCTTaGCAGTTGAGCACGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ESCLLGGDLRIECLARNKTVPFP*QLSTRR
Trigger: CCTGCGCGTGCTCAACTGCCAAGGGAAGGGCACGGT...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGGGCAGCACCTGGCAATaGCGTAGACACCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLGSTWQ*RRHPHP
Trigger: GGGGTGAGGGTGTCTACGCCATTGCCAGGTGCTGCC...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGACGCTGCAGTTGGCCTaGGGTAGCAGGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQTLQLA*GSRQHL
Trigger: CAGGTGCTGCCTGCTACCCCAGGCCAACTGCAGCGT...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGTGTGGACGCTGCAGTTaGCCTGGGGTAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ESCLLGGDLRIECLARNKCGRCS*PGVAGS
Trigger: GCTGCCTGCTACCCCAGGCCAACTGCAGCGTCCACA...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGCATGCTGGCCTCAGCTaGTGGAGCTGTGTGGACGCT +
Preference number: 4 (lower is better)
Translates to: WEESCLLGGDLRIECLARHAGLS*WSCVDA
Trigger: AGCGTCCACACAGCTCCACCAGCTGAGGCCAGCATG...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGCCCTGTTGGTGGCAGTaGACACGGGTCCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLPCWWQ*TRVPML
Trigger: CAGCATGGGGACCCGTGTCCACTGCCACCAACAGGG...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGAGCACAGGCGGCTTGTaGGTGCCAAGGTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQSTGGL*VPRSST
Trigger: GGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGCT...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ATTCCATGCTCCTTGACTTTGCATTCCAGACCTGGGGCATGGCAGCAGGAAGCGAGCACAGGCGGCTTGTaGGTGCCAAGGTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: IPCSLTLHSRPGAWQQEASTGGL*VPRSST
Trigger: GGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGCT...CGCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGGTTGGGCTGACCTCGTaGCCTCAGCACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLVGLTS*PQHRRL
Trigger: AAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAAC...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGGCCCACGCACTGGTTaGGCTGACCTCGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLGPRTG*ADLVAS
Trigger: TGAGGCCACGAGGTCAGCCCAACCAGTGCGTGGGCC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGTGGCAGCAGGAAGCGTaGATGCTGGCCTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQWQQEA*MLASLW
Trigger: CCACAGGGAGGCCAGCATCCACGCTTCCTGCTGCCA...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGCCTCGTGCCAGGCCATaGAGGGCTGAGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQPRARP*RAERGT
Trigger: TGTCCCTCTCTCAGCCCTCCATGGCCTGGCACGAGG...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCCGGACATCGGCACATTaGGAGCAGCTGGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTRTSAH*EQLAAP
Trigger: GGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCG...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGAGGCCCCGAGTGTGCTaGCCATACAGTCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRRPRVC*PYSPAK
Trigger: TTTTGCAGGACTGTATGGTCAGCACACTCGGGGCCT...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAGGATTCCATGCTCCTTaGCTTTGCATTCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTGFHAP*LCIPDL
Trigger: CAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCC...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp CCTTCGCTGGTGCTGCCTGTAGTGCTGACGTCCCGGCTCCTGACTACACACGTGGGATTCCATGCTCCTTaGCTTTGCATTCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: PSLVLPVVLTSRLLTTHVGFHAP*LCIPDL
Trigger: CAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCC...CACGTGTGTAGTCAGGAGCCGGGACGTCAGCACTACAGGCAGCACCAGCGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR TCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGGCACCCAGAGTGAGTaGGTTCCAGGCAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLGTQSE*VPGKEA
Trigger: AGCCTCCTTGCCTGGAACTCACTCACTCTGGGTGCC...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGGTGGAGCGGGTTGGCTaGGACAGTGCATGCACCACT +
Preference number: 4 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQVERVG*DSACTT
Trigger: AGTGGTGCATGCACTGTCTCAGCCAACCCGCTCCAC...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGGTGGAGCGGGTTGGCTaGGACAGTGCATGCACCACT +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQVERVG*DSACTT
Trigger: AGTGGTGCATGCACTGTCTCAGCCAACCCGCTCCAC...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGTTTCTTCCTCTGTaGAGTAGGGGTGCGAATGTG +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGRFLPL*SRGANV
Trigger: CACATTCGCACCCCTACTTCACAGAGGAAGAAACCT...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCAGTGCGCTCTGACTaGGAGAGGTGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLAVRSD*ERWVSS
Trigger: GGAGGAGACCCACCTCTCGCAGTCAGAGCGCACTGC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CACTTGCTGGCCTGTCTGTGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAGGCCATGGAAGACATaGAGGATCTTGGTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: HLLACLWKRVPSSSGTFSRPWKT*RILVRY
Trigger: ATACCTCACCAAGATCCTGCATGTCTTCCATGGCCT...CGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCACAGACAGGCCAGCAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCCCCCTGCCAGGTGGGTaGCATGACTGTCACACTTGC +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTPLPGG*HDCHTC
Trigger: GCAAGTGTGACAGTCATGGCACCCACCTGGCAGGGG...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGGCATCATGGCTGCAATaGCAGCCACGTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLASWLQ*QPRGQQ
Trigger: CTGCTGCCCACGTGGCTGGCATTGCAGCCATGATGC...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACACTGACCATACAGTCCTaGAAAACAGCTGCCAACCTG +
Preference number: 4 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTLTIQS*KTAANL
Trigger: CAGGTTGGCAGCTGTTTTGCAGGACTGTATGGTCAG...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGAGCTGTGTGGACGCTaGAGTTGGCCTGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLELCGR*SWPGVA
Trigger: TGCTACCCCAGGCCAACTGCAGCGTCCACACAGCTC...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCGAGCTGTGTGGACGCTaGAGTTGGCCTGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTELCGR*SWPGVA
Trigger: TGCTACCCCAGGCCAACTGCAGCGTCCACACAGCTC...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGACCTGAGGATTGAATaGCTGGCACGGAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: NGEMPHSEGGSFLAPPPGDLRIE*LARNKS
Trigger: GCTCTTGTTCCGTGCCAGGCATTCAATCCTCAGGTC...CCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGAAAAAGTTCCATGCCTaGAGGCATCGTTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPKKFHA*RHRSAI
Trigger: GATGGCAGAACGATGCCTGCAGGCATGGAACTTTTT...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGCCTCTCCCCCGACCATaGCTTAGAAGCATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLPLPRP*LRSISA
Trigger: GGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGG...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GGCCACGGTCACCTGCTCCTGAGGGGCCGGGATTCCATGCTCCTTGACTTTGCAAGCTCAGATGTGAAATaGTGGGATGCTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GHGHLLLRGRDSMLLDFASSDVK*WDAPSP
Trigger: TGGAGACGGAGCATCCCAGCATTTCACATCTGAGCT...TGCAAAGTCAAGGAGCATGGAATCCCGGCCCCTCAGGAGCAGGTGACCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGGGTGGAAGGTGGCTGTaGTTCCGTGCTCGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQGGRWL*FRARVL
Trigger: AAGCACCCGAGCACGGAACCACAGCCACCTTCCACC...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CCA 90 bp GTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTTCTGACTGCGAGAGGTaGGTCTCCTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: VTMTLPSISRWSLCMLVSSDCER*VSSFST
Trigger: GGTGCTGAAGGAGGAGACCCACCTCTCGCAGTCAGA...AGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGTTCCACGGGATGCTCTaGGCAAAGACAGAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRFHGML*AKTEES
Trigger: GGACTCCTCTGTCTTTGCCCAGAGCATCCCGTGGAA...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGACAGGCTGGACCAGCTaGCTTTTCCGAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGTGWTS*LFRINS
Trigger: GGAGTTTATTCGGAAAAGCCAGCTGGTCCAGCCTGT...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAAATGATGTCCTCCCCTaGGGCAAAGAGGTCCACACA +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPNDVLP*GKEVHT
Trigger: TGTGTGGACCTCTTTGCCCCAGGGGAGGACATCATT...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGTCTTTGGCAGAGAAGTaGATCAGTCTCTGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPSLAEK*ISLCLN
Trigger: GTTGAGGCAGAGACTGATCCACTTCTCTGCCAAAGA...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGGTAGCAGGCAGCACCTaGCAATGGCGTAGACACCCT +
Preference number: 4 (lower is better)
Translates to: WEESCLLGGDLRIECLARVAGST*QWRRHP
Trigger: AGGGTGTCTACGCCATTGCCAGGTGCTGCCTGCTAC...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGACGCTGCAGTTGGCCTaGGGTAGCAGGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLTLQLA*GSRQHL
Trigger: CAGGTGCTGCCTGCTACCCCAGGCCAACTGCAGCGT...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGAGGACGTGGCCCTGTTaGTGGCAGTGGACACGGGTC +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLRTWPC*WQWTRV
Trigger: GACCCGTGTCCACTGCCACCAACAGGGCCACGTCCT...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGTCCAGACCTGGGGCATaGCAGCAGGAAGCGTGGATG +
Preference number: 4 (lower is better)
Translates to: ESCLLGGDLRIECLARNKSRPGA*QQEAWM
Trigger: CATCCACGCTTCCTGCTGCCATGCCCCAGGTCTGGA...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CTGCTCCTGAGGGGCCGGGATTCCATGCTCCTTGACTTTGCATTCCAGACCTGGTTTGCATTCCAGACCTaGGGCATGGCAGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLLRGRDSMLLDFAFQTWFAFQT*GMAAGS
Trigger: GCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAA...CCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCCCGGCCCCTCAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGACACCCATCCTGGGATaGGGCTGTCACTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQTPILG*GCHWSS
Trigger: GGAGCTCCAGTGACAGCCCCATCCCAGGATGGGTGT...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGCCCAGACACCCATCCTaGGATGGGGCTGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLPRHPS*DGAVTG
Trigger: TCCAGTGACAGCCCCATCCCAGGATGGGTGTCTGGG...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGCCTGTCTCCAGCCTCTaGCTAGATGCCATCCAGAAA +
Preference number: 4 (lower is better)
Translates to: NGEMPHSEGGSFLAPPPGPVSSL*LDAIQK
Trigger: TTTCTGGATGGCATCTAGCCAGAGGCTGGAGACAGG...CCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGCTGGGCAGGATATCCTaGCAGTGCTCTGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLLGRIS*QCSARP
Trigger: AGGGCGAGCAGAGCACTGCCAGGATATCCTGCCCAG...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS-3UTR TCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGCATGCAGGATCTTGGTaGGGTATCCCCGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKEHAGSW*GIPGGQ
Trigger: CTGCCCGCCGGGGATACCTCACCAAGATCCTGCATG...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAACAGCTCGACCTGTTTaGATGGTGAAATGCCCCACA +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPTARPV*MVKCPT
Trigger: TGTGGGGCATTTCACCATTCAAACAGGTCGAGCTGT...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTAGGTTTCTTCCTCTGTaGAGTAGGGGTGCGAATGTG +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPRFLPL*SRGANV
Trigger: CACATTCGCACCCCTACTTCACAGAGGAAGAAACCT...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGCGGCGCCTTGAGCCTTaGGGTGGGGAGGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLRRLEP*GGEDCA
Trigger: TGCACAGTCCTCCCCACCGCAAGGCTCAAGGCGCCG...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR GCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCACCACCACGTAGGTaGCAGGCAACCTCCACGGAT +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLAPPRR*QATSTD
Trigger: ATCCGTGGAGGTTGCCTGGCACCTACGTGGTGGTGC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGAGGCCATGGAAGACATaGAGGATCTTGGTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVRPWKT*RILVRY
Trigger: ATACCTCACCAAGATCCTGCATGTCTTCCATGGCCT...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTGGTGGTCACTCTGTATaGTGGTGTCTAGGAGATACA +
Preference number: 4 (lower is better)
Translates to: HTAESVLGDGSPQATFGCGGHSV*WCLGDT
Trigger: TGTATCTCCTAGACACCAGCATACAGAGTGACCACC...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGGTGACACAAAGCAGGTaGTGCAGTCGCTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ESCLLGGDLRIECLARNKVTQSR*CSRWRH
Trigger: GTGCCTCCAGCGACTGCAGCACCTGCTTTGTGTCAC...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAAGTGGATCAGTCTCTaGCTCAACTCGGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: WEESCLLGGDLRIECLARKWISL*LNSARV
Trigger: CACCCTGGCCGAGTTGAGGCAGAGACTGATCCACTT...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGTCCTGCAAAACAGCTaGCAACCTGCCCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLVLQNS*QPAPWV
Trigger: CACCCATGGGGCAGGTTGGCAGCTGTTTTGCAGGAC...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp ATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAAAAAGTTCCATGCCTaGAGGCATCGTTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: MVKCPTVREGASWHLHLGKKFHA*RHRSAI
Trigger: GATGGCAGAACGATGCCTGCAGGCATGGAACTTTTT...CCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTACGGAAAAAGTTCCATaGCTGCAGGCATCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPTEKVP*LQASFC
Trigger: GCAGAACGATGCCTGCAGGCATGGAACTTTTTCCGT...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGCCTCTCCCCCGACCATaGCTTAGAAGCATCTCCGCC +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLPLPRP*LRSISA
Trigger: GGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGG...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTAGGAGATACACCTGCCAGTCTCACTGCCTaGCTCACTCCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: CPRFPGGHSVCWCLGDTPASLTA*LTPPGS
Trigger: TGAGCCTGGAGGAGTGAGCCAGGCAGTGAGACTGGC...AGGTGTATCTCCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCTCTGACTGCGAGAGGTaGGTCTCCTCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTSDCER*VSSFST
Trigger: GGTGCTGAAGGAGGAGACCCACCTCTCGCAGTCAGA...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CGGTGGTCACTCTGTATGCTGGTGTCTAGGAGATACACCTCCACCAGGCTGCCTTTCCACGGGATGCTCTaGGCAAAGACAGAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RWSLCMLVSRRYTSTRLPFHGML*AKTEES
Trigger: GGACTCCTCTGTCTTTGCCCAGAGCATCCCGTGGAA...AGGCAGCCTGGTGGAGGTGTATCTCCTAGACACCAGCATACAGAGTGACCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGGGTCACTCTGTATGCTaGTGTCTAGGAGATACACCT +
Preference number: 4 (lower is better)
Translates to: VVGPLPRPCLRSISARPVGHSVC*CLGDTP
Trigger: AGGTGTATCTCCTAGACACCAGCATACAGAGTGACC...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGCCCTCGATTTCCCGGTaGTCACTCTGTATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WEESCLLGGDLRIECLARPSISR*SLCMLV
Trigger: CACCAGCATACAGAGTGACCACCGGGAAATCGAGGG...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTCCCTCGATTTCCCGGTaGTCACTCTGTATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VTMTLPSISRWSLCMLVSPSISR*SLCMLV
Trigger: CACCAGCATACAGAGTGACCACCGGGAAATCGAGGG...AGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGTTGCTTGGGTGGGGCTaGTGCTCAAGGAGGGACAGT +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQLLGWG*CSRRDS
Trigger: ACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGCGGCGAGGCAGAAACTaGGAAATCTGGGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRRRGRN*EIWAGY
Trigger: ATATCCTGCCCAGATTTCCCAGTTTCTGCCTCGCCG...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
3UTR CAA 72 bp TCAATAAAAGTCATTCTGCCCACGGACATCGGCACATaGGGAGCAGCTGGCAGCACCCGAGCACAGCTCGAC +
Preference number: 4 (lower is better)
Translates to: SIKVILPTDIGT*GAAGSTRAQLD
Trigger: GTCGAGCTGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGGCCAGGTGGGTGCCATaGCTGTCACACTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLARWVP*LSHLLA
Trigger: GGCCAGCAAGTGTGACAGTCATGGCACCCACCTGGC...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCACACAAAGCAGGTGCTaGAGTCGCTGGAGGCACCAA +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTTQSRC*SRWRHQ
Trigger: TTGGTGCCTCCAGCGACTGCAGCACCTGCTTTGTGT...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGGGGGCCGGGATTCCATaGTCCTTGACTTTGCATTCC +
Preference number: 4 (lower is better)
Translates to: ESCLLGGDLRIECLARNKGAGIP*SLTLHS
Trigger: GGAATGCAAAGTCAAGGAGCATGGAATCCCGGCCCC...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGTTCCACGGGATGCTCTaGGCAAAGACAGAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLFHGML*AKTEES
Trigger: GGACTCCTCTGTCTTTGCCCAGAGCATCCCGTGGAA...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCATCTTTGGCAGAGAAGTaGATCAGTCTCTGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: EGQLLALSPDHALEASPPSLAEK*ISLCLN
Trigger: GTTGAGGCAGAGACTGATCCACTTCTCTGCCAAAGA...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGCACTCCTGGAGAAACTaGAGCAGCTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLHSWRN*SSSAAP
Trigger: AGGAGCTGCTGAGCTGCTCCAGTTTCTCCAGGAGTG...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGTTTGCATTCCAGACCTaGGGCATGGCAGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQFAFQT*GMAAGS
Trigger: GCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAA...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGTTTGCATTCCAGACCTaGGGCATGGCAGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQFAFQT*GMAAGS
Trigger: GCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAA...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGACACCCATCCTGGGATaGGGCTGTCACTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKETPILG*GCHWSS
Trigger: GGAGCTCCAGTGACAGCCCCATCCCAGGATGGGTGT...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGACAGTTAGCTGGAGATaGGGGCCATCAGCACCTTTC +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLTVSWR*GPSAPF
Trigger: GAAAGGTGCTGATGGCCCTCATCTCCAGCTAACTGT...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp TCGGTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGGGTGGTCACTCTGTATaGTGGTGTCTAGGAGATACA +
Preference number: 4 (lower is better)
Translates to: SVTMTLPSISRWSLCMLVGGHSV*WCLGDT
Trigger: TGTATCTCCTAGACACCAGCATACAGAGTGACCACC...CACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR GCA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGGGGCCGGGATTCCATaGTCCTTGACTTTGCATTCC +
Preference number: 4 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLGAGIP*SLTLHS
Trigger: GGAATGCAAAGTCAAGGAGCATGGAATCCCGGCCCC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGGACCTGAGGATTGAATaGCTGGCACGGAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLDLRIE*LARNKS
Trigger: GCTCTTGTTCCGTGCCAGGCATTCAATCCTCAGGTC...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGCGGCAGACAGCATCATaGCTGCAATGCCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKERQTAS*LQCQPR
Trigger: ACGTGGCTGGCATTGCAGCCATGATGCTGTCTGCCG...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTCCAGTGAATCAGGCCTaGGTGATAACGGAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPPVNQA*VITEKV
Trigger: AACTTTTTCCGTTATCACCCAGGCCTGATTCACTGG...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCACAGCTCGACCTGTTTaGATGGTGAAATGCCCCACA +
Preference number: 4 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTTARPV*MVKCPT
Trigger: TGTGGGGCATTTCACCATTCAAACAGGTCGAGCTGT...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGTCCTTGGTGGAGACCTaGGGATTGAATGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKESLVET*GLNAWH
Trigger: GTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGA...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGCCAGGTTCCACGGGATaGTCTGGGCAAAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLPGSTG*SGQRQR
Trigger: CCTCTGTCTTTGCCCAGAGCATCCCGTGGAACCTGG...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGGTGACACAAAGCAGGTaGTGCAGTCGCTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLVTQSR*CSRWRH
Trigger: GTGCCTCCAGCGACTGCAGCACCTGCTTTGTGTCAC...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGACGGAAAAAGTTCCATaGCTGCAGGCATCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLTEKVP*LQASFC
Trigger: GCAGAACGATGCCTGCAGGCATGGAACTTTTTCCGT...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGAGGATATCCTGGCAGTaGTCTGCTCGCCCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLRISWQ*SARPSS
Trigger: CGAGGAAGGGCGAGCAGAGCACTGCCAGGATATCCT...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS-3UTR CCA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGCCAGGAAGAAGGCCATaGAAGACATGCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLPGRRP*KTCRIL
Trigger: CAAGATCCTGCATGTCTTCCATGGCCTTCTTCCTGG...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp TCGAAGTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGGGTCACTCTGTATGCTaGTGTCTAGGAGATACACCT +
Preference number: 4 (lower is better)
Translates to: SKSVTMTLPSISRWSLCMGHSVC*CLGDTP
Trigger: AGGTGTATCTCCTAGACACCAGCATACAGAGTGACC...CATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGACTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CCA 90 bp AGCTCGACCTGTTTGAATGGTGAAATGCCCCACAGTGAGGGAGGGAGCTTCCTGACAGGCTGGACCAGCTaGCTTTTCCGAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: SSTCLNGEMPHSEGGSFLTGWTS*LFRINS
Trigger: GGAGTTTATTCGGAAAAGCCAGCTGGTCCAGCCTGT...CAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCATTCAAACAGGTCGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR TCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGACAGTTAGCTGGAGATaGGGGCCATCAGCACCTTTC +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKETVSWR*GPSAPF
Trigger: GAAAGGTGCTGATGGCCCTCATCTCCAGCTAACTGT...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGAGGCCATGGAAGACATaGAGGATCTTGGTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQRPWKT*RILVRY
Trigger: ATACCTCACCAAGATCCTGCATGTCTTCCATGGCCT...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGCATGACTGTCACACTTaGTGGCCTGTCTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKEHDCHT*WPVCGS
Trigger: GCTTCCACAGACAGGCCAGCAAGTGTGACAGTCATG...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR GCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGCCATGGGAAGAATCCTaGCTCCTTGGTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLPWEES*LLGGDL
Trigger: CAGGTCTCCACCAAGGAGGCAGGATTCTTCCCATGG...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGAATGATGTCCTCCCCTaGGGCAAAGAGGTCCACACA +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKENDVLP*GKEVHT
Trigger: TGTGTGGACCTCTTTGCCCCAGGGGAGGACATCATT...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGAGAAACTGGGAAATCTaGGCAGGATATCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQRNWEI*AGYPGS
Trigger: ACTGCCAGGATATCCTGCCCAGATTTCCCAGTTTCT...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS-3UTR TCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGATTCCATGCTCCTTaGCTTTGCATTCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKEGFHAP*LCIPDL
Trigger: CAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCC...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp ACAGACCCAAAAGATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGCCAGGAAGAAGGCCATaGAAGACATGCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: TDPKDKCLLAWVGLVLKEPGRRP*KTCRIL
Trigger: CAAGATCCTGCATGTCTTCCATGGCCTTCTTCCTGG...CTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATCTTTTGGGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGGGTCACTCTGTATGCTaGTGTCTAGGAGATACACCT +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLGHSVC*CLGDTP
Trigger: AGGTGTATCTCCTAGACACCAGCATACAGAGTGACC...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CCA 90 bp GCACGGAACAAGAGCTCAATAAAAGTCATTCTGCCCACGGACATCGGCACATTGCCAGTGAATCAGGCCTaGGTGATAACGGAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: ARNKSSIKVILPTDIGTLPVNQA*VITEKV
Trigger: AACTTTTTCCGTTATCACCCAGGCCTGATTCACTGG...CAATGTGCCGATGTCCGTGGGCAGAATGACTTTTATTGAGCTCTTGTTCCGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS CCA 90 bp AGGAGCAGGGCGCGTGAAGGGGCGCGCGGAATCCTGGCTGGGAGCTaGGAGCCGCTGCTGCAACGACGCGTCCCGGCCCGCCCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: RSRAREGARGILAGS*EPLLQRRVPARPSQ
Trigger: CTGGCTCGGGCGGGCCGGGACGCGTCGTTGCAGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGCGCCCCTTCACGCGCCCTGCTCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 90 bp CGCGTGAAGGGGCGCGCGGAATCCTGGCTGGGAGCTGGGAGCCGCTaGTGCAACGACGCGTCCCGGCCCGCCCGAGCCAGTCTCACTGCC +
Preference number: 5 (lower is better)
Translates to: RVKGRAESWLGAGSR*CNDASRPARASLTA
Trigger: GGCAGTGAGACTGGCTCGGGCGGGCCGGGACGCGTCGTTGCAGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGCGCCCCTTCACGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 90 bp GTGAAGGGGCGCGCGGAATCCTGGCTGGGAGCTGGGAGCCGCTGCTaGAACGACGCGTCCCGGCCCGCCCGAGCCAGTCTCACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: VKGRAESWLGAGSRC*NDASRPARASLTAW
Trigger: CCAGGCAGTGAGACTGGCTCGGGCGGGCCGGGACGCGTCGTTGCAGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGCGCCCCTTCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CCA 90 bp ACGGGCGCCCGCGGGACCCAGGAGCAGCAGCAGCAGCAGCAGCAGTaGCAGCGGCCACCAGGACCGCCTGGAGCTGACGGTGCCCATGAG +
Preference number: 5 (lower is better)
Translates to: TGARGTQEQQQQQQQ*QRPPGPPGADGAHE
Trigger: CTCATGGGCACCGTCAGCTCCAGGCGGTCCTGGTGGCCGCTGCCACTGCTGCTGCTGCTGCTGCTGCTCCTGGGTCCCGCGGGCGCCCGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS TCA 90 bp CTGGGGAGTAGAGGCAGGCATCGTCCCGGAAGTTGCCGGCAGCGGTaGCCAGCACGACCCCAGCCCTCGCCAGGCGCTGGCAGGCGGCGT +
Preference number: 5 (lower is better)
Translates to: LGSRGRHRPGSCRQR*PARPQPSPGAGRRR
Trigger: ACGCCGCCTGCCAGCGCCTGGCGAGGGCTGGGGTCGTGCTGGTCACCGCTGCCGGCAACTTCCGGGACGATGCCTGCCTCTACTCCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS GCA 90 bp CTGGGATGGGGCTGTCACTGGAGCTCCTGGGAGGCCTGCGCCAGGTaGCGGCTCCGGCAGCAGATGGCAACGGCTGTCACGGCCCCTTCG +
Preference number: 5 (lower is better)
Translates to: LGWGCHWSSWEACAR*RLRQQMATAVTAPS
Trigger: CGAAGGGGCCGTGACAGCCGTTGCCATCTGCTGCCGGAGCCGGCACCTGGCGCAGGCCTCCCAGGAGCTCCAGTGACAGCCCCATCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS TCA 90 bp GGCTGCGCATGCTGGCACCCTTGGCCACGCCGGCATCCCGGCCGCTaGCCACCCCTGCCAGGTGGGTGCCATGACTGTCACACTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GCACWHPWPRRHPGR*PPLPGGCHDCHTCW
Trigger: CCAGCAAGTGTGACAGTCATGGCACCCACCTGGCAGGGGTGGTCAGCGGCCGGGATGCCGGCGTGGCCAAGGGTGCCAGCATGCGCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS GCA 90 bp GACCTAGAGGCCGTGCGCGGTCCACGCCGGCGGCGCCTTGAGCCTTaGGGTGGGGAGGACTGTGCAGGAGCTGAAGTTCAGGAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: DLEAVRGPRRRRLEP*GGEDCAGAEVQEQG
Trigger: GCCCTGCTCCTGAACTTCAGCTCCTGCACAGTCCTCCCCACCGCAAGGCTCAAGGCGCCGCCGGCGTGGACCGCGCACGGCCTCTAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CCA 90 bp TGCTGCAACGACGCGTCCCGGCCCGCCCGAGCCAGTCTCACTGCCTaGCTCACTCCTCCAGGCTCAGACCCTGAACTGAACGGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: CCNDASRPARASLTA*LTPPGSDPELNGGA
Trigger: GGCGCCGCCGTTCAGTTCAGGGTCTGAGCCTGGAGGAGTGAGCCAGGCAGTGAGACTGGCTCGGGCGGGCCGGGACGCGTCGTTGCAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS-3UTR CAA 90 bp CACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGTGGGAGCTGCAGCCAGGGCGGCCACCAGGTaGGGGGTCAGTACCCGCTGG +
Preference number: 5 (lower is better)
Translates to: HRRLVGAKVLHLPVGAAARAATR*GVSTRW
Trigger: CCAGCGGGTACTGACCCCCAACCTGGTGGCCGCCCT...GGCTGCAGCTCCCACTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CAA 90 bp CACGCACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCGCCCGGCAGACCAGCTaGCCCCCTTGGGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: HALVGLTSWPQHRRLVGAARQTS*PPWASM
Trigger: CATGGAGGCCCAAGGGGGCAAGCTGGTCTGCCGGGC...GGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS TCA 90 bp GGTGGGGAGGACTGTGCAGGAGCTGAAGTTCAGGAGCAGGGCGCGTaGAGGGGCGCGCGGAATCCTGGCTGGGAGCTGGGAGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: GGEDCAGAEVQEQGA*RGARNPGWELGAAA
Trigger: AGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGCGCCCCTTCACGCGCCCTGCTCCTGAACTTCAGCTCCTGCACAGTCCTCCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 90 bp ACATGCAGGATCTTGGTGAGGTATCCCCGGCGGGCAGCCTGGGCCTaGAGGCGGCGGGCAGTGCGCTCTGACTGCGAGAGGTGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TCRILVRYPRRAAWA*RRRAVRSDCERWVS
Trigger: GGAGACCCACCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGCAGGCCCAGGCTGCCCGCCGGGGATACCTCACCAAGATCCTGCATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS GCA 90 bp GCTGGCACCCTTGGCCACGCCGGCATCCCGGCCGCTGACCACCCCTaGCAGGTGGGTGCCATGACTGTCACACTTGCTGGCCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: AGTLGHAGIPAADHP*QVGAMTVTLAGLSV
Trigger: CACAGACAGGCCAGCAAGTGTGACAGTCATGGCACCCACCTGGCAGGGGTGGTCAGCGGCCGGGATGCCGGCGTGGCCAAGGGTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS GCA 90 bp ACACCCATCCTGGGATGGGGCTGTCACTGGAGCTCCTGGGAGGCCTaGGCCAGGTGCCGGCTCCGGCAGCAGATGGCAACGGCTGTCACG +
Preference number: 5 (lower is better)
Translates to: TPILGWGCHWSSWEA*ARCRLRQQMATAVT
Trigger: CGTGACAGCCGTTGCCATCTGCTGCCGGAGCCGGCACCTGGCGCAGGCCTCCCAGGAGCTCCAGTGACAGCCCCATCCCAGGATGGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS-3UTR CAA 90 bp TGGAAGCGGGTCCCGTCCTCCTCGGGCACATTCTCGAAGTCGGTGACCATGACCCACGCCGGCGGCGCCTaGAGCCTTGCGGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: WKRVPSSSGTFSKSVTMTHAGGA*SLAVGR
Trigger: CCTCCCCACCGCAAGGCTCAAGGCGCCGCCGGCGTG...GGTCATGGTCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGCTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CAA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCGTGTGGACGCTGCAGTaGGCCTGGGGTAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPVWTLQ*AWGSRQ
Trigger: CTGCCTGCTACCCCAGGCCAACTGCAGCGTCCACAC...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCCTCAGCACAGGCGGCTaGTGGGTGCCAAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPLSTGG*WVPRSS
Trigger: GGAGGACCTTGGCACCCACAAGCCGCCTGTGCTGAG...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CCCCACAGTGAGGGAGGGAGCTTCCTGGCACCTCCACCTGGGGAGGAGGCACCCCCCCGCAGGCCACCTTaGGGTGTTGCTAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: PHSEGGSFLAPPPGEEAPPRRPP*GVASTA
Trigger: GGCTGTGCTAGCAACACCCAAAGGTGGCCTGCGGGG...GGGTGCCTCCTCCCCAGGTGGAGGTGCCAGGAAGCTCCCTCCCTCACTGTGGGG
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS TCA 90 bp CCGAGCCAGTCTCACTGCCTGGCTCACTCCTCCAGGCTCAGACCCTaGACTGAACGGCGGCGCCCGCCTGCAACCATGAGCGCCTCGACG +
Preference number: 5 (lower is better)
Translates to: PSQSHCLAHSSRLRP*TERRRPPATMSAST
Trigger: CGTCGAGGCGCTCATGGTTGCAGGCGGGCGCCGCCGTTCAGTTCAGGGTCTGAGCCTGGAGGAGTGAGCCAGGCAGTGAGACTGGCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 90 bp CTCCACGGATCCTTGGCGCAGCGGTGGAAGGTGGCTGTGGTTCCGTaGTCGGGTGCTTCGGCCAGGCCGTCCTCCTCGGAACGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: LHGSLAQRWKVAVVP*SGASARPSSSERKA
Trigger: AGCCTTGCGTTCCGAGGAGGACGGCCTGGCCGAAGCACCCGAGCACGGAACCACAGCCACCTTCCACCGCTGCGCCAAGGATCCGTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CCA 90 bp CAGGCAACCTCCACGGATCCTTGGCGCAGCGGTGGAAGGTGGCTGTaGTTCCGTGCTCGGGTGCTTCGGCCAGGCCGTCCTCCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: QATSTDPWRSGGRWL*FRARVLRPGRPPRN
Trigger: GTTCCGAGGAGGACGGCCTGGCCGAAGCACCCGAGCACGGAACCACAGCCACCTTCCACCGCTGCGCCAAGGATCCGTGGAGGTTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CCA 90 bp TGGAAGACATGCAGGATCTTGGTGAGGTATCCCCGGCGGGCAGCCTaGGCCTGCAGGCGGCGGGCAGTGCGCTCTGACTGCGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: WKTCRILVRYPRRAA*ACRRRAVRSDCERW
Trigger: CCACCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGCAGGCCCAGGCTGCCCGCCGGGGATACCTCACCAAGATCCTGCATGTCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS-3UTR CAA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTCGCATGCTGGCACCCTaGGCCACGCCGGCATCCCGG +
Preference number: 5 (lower is better)
Translates to: HTAESVLGDGSPQATFGCRMLAP*ATPASR
Trigger: CCGGGATGCCGGCGTGGCCAAGGGTGCCAGCATGCG...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGGCCCGGCAGACCAGCTaGCCCCCTTGGGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPARQTS*PPWASM
Trigger: CATGGAGGCCCAAGGGGGCAAGCTGGTCTGCCGGGC...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGTCACCCCCAAAAGCGTaGTGGGCCCGGCAGACCAGC +
Preference number: 5 (lower is better)
Translates to: PRGLSTGGLWVPRSSTSQSPPKA*WARQTS
Trigger: GCTGGTCTGCCGGGCCCACAACGCTTTTGGGGGTGA...CTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CAA 90 bp CCACGCACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCGAGGACGTGGCCCTGTaGGTGGCAGTGGACACGGGT +
Preference number: 5 (lower is better)
Translates to: PRTGWADLVASAQAACGCEDVAL*VAVDTG
Trigger: ACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTC...GCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGTGCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS TCA 90 bp CCAGTCTCACTGCCTGGCTCACTCCTCCAGGCTCAGACCCTGAACTaGACGGCGGCGCCCGCCTGCAACCATGAGCGCCTCGACGTCGCT +
Preference number: 5 (lower is better)
Translates to: PVSLPGSLLQAQTLN*TAAPACNHERLDVA
Trigger: AGCGACGTCGAGGCGCTCATGGTTGCAGGCGGGCGCCGCCGTTCAGTTCAGGGTCTGAGCCTGGAGGAGTGAGCCAGGCAGTGAGACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS TCA 90 bp CCAGGAAGCCAGGAAGAAGGCCATGGAAGACATGCAGGATCTTGGTaGGGTATCCCCGGCGGGCAGCCTGGGCCTGCAGGCGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: PGSQEEGHGRHAGSW*GIPGGQPGPAGGGQ
Trigger: CTGCCCGCCGCCTGCAGGCCCAGGCTGCCCGCCGGGGATACCTCACCAAGATCCTGCATGTCTTCCATGGCCTTCTTCCTGGCTTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS TCA 90 bp CCAGGCTCAGACCCTGAACTGAACGGCGGCGCCCGCCTGCAACCATaGGCGCCTCGACGTCGCTGCGGAAACCTTCTAGGGTGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: PGSDPELNGGARLQP*APRRRCGNLLGCGC
Trigger: GCACCCACACCCTAGAAGGTTTCCGCAGCGACGTCGAGGCGCTCATGGTTGCAGGCGGGCGCCGCCGTTCAGTTCAGGGTCTGAGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS GCA 90 bp GCGGCGAGGCAGAAACTGGGAAATCTGGGCAGGATATCCTGGCAGTaGTCTGCTCGCCCTTCCTCGGCCTCCGGGTCTCCCAACCCCGCG +
Preference number: 5 (lower is better)
Translates to: AARQKLGNLGRISWQ*SARPSSASGSPNPA
Trigger: CGCGGGGTTGGGAGACCCGGAGGCCGAGGAAGGGCGAGCAGAGCACTGCCAGGATATCCTGCCCAGATTTCCCAGTTTCTGCCTCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS CCA 90 bp CTTCCCACTCCTGGAGAAACTGGAGCAGCTCAGCAGCTCCTCATCTaGGGCGCAGCGGGCGACGGCTGTGGCCATCCGTGTAGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: LPTPGETGAAQQLLI*GAAGDGCGHPCRPR
Trigger: TCGGGGCCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGATGAGGAGCTGCTGAGCTGCTCCAGTTTCTCCAGGAGTGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
ENST00000673913.1
CDS CCA 90 bp CAGTGGGAGCTGCAGCCTGTGAGGACGTGGCCCTGTTGGTGGCAGTaGACACGGGTCCCCATGCTGGCCTCAGCTGGTGGAGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: QWELQPVRTWPCWWQ*TRVPMLASAGGAVW
Trigger: CCACACAGCTCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTCACAGGCTGCAGCTCCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS CCA 90 bp GCAACCATGAGCGCCTCGACGTCGCTGCGGAAACCTTCTAGGGTGTaGGTGCTTGACGCCTGGGGCGCGCAGATCACGCCACCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: ATMSASTSLRKPSRV*VLDAWGAQITPPEP
Trigger: GGGCTCTGGTGGCGTGATCTGCGCGCCCCAGGCGTCAAGCACCCACACCCTAGAAGGTTTCCGCAGCGACGTCGAGGCGCTCATGGTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CAA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGCGCTGGCAGGCGGCGTaGAGGACGCGGCTGTACCCA +
Preference number: 5 (lower is better)
Translates to: VVGPLPRPCLRSISARPVRWQAA*RTRLYP
Trigger: TGGGTACAGCCGCGTCCTCAACGCCGCCTGCCAGCG...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGGACCAGCTTGCCCCCTaGGGCCTCCATGCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: VVGPLPRPCLRSISARPVDQLAP*GLHALA
Trigger: GGCGAGCGCATGGAGGCCCAAGGGGGCAAGCTGGTC...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTCAGCACAGGCGGCTaGTGGGTGCCAAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCLSTGG*WVPRSS
Trigger: GGAGGACCTTGGCACCCACAAGCCGCCTGTGCTGAG...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS GCA 90 bp CACGGGTCCCCATGCTGGCCTCAGCTGGTGGAGCTGTGTGGACGCTaGAGTTGGCCTGGGGTAGCAGGCAGCACCTGGCAATGGCGTAGA +
Preference number: 5 (lower is better)
Translates to: HGSPCWPQLVELCGR*SWPGVAGSTWQWRR
Trigger: TCTACGCCATTGCCAGGTGCTGCCTGCTACCCCAGGCCAACTGCAGCGTCCACACAGCTCCACCAGCTGAGGCCAGCATGGGGACCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673903.1
ENST00000673913.1
CDS CCA 90 bp CAGTGGACACGGGTCCCCATGCTGGCCTCAGCTGGTGGAGCTGTGTaGACGCTGCAGTTGGCCTGGGGTAGCAGGCAGCACCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: QWTRVPMLASAGGAV*TLQLAWGSRQHLAM
Trigger: CATTGCCAGGTGCTGCCTGCTACCCCAGGCCAACTGCAGCGTCCACACAGCTCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673903.1
ENST00000673913.1
CDS-3UTR CAA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAGCATCGTCCCGGAAGTaGCCGGCAGCGGTGACCAGC +
Preference number: 5 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTASSRK*PAAVTS
Trigger: GCTGGTCACCGCTGCCGGCAACTTCCGGGACGATGC...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTAGGGCGGCCACCAGGTaGGGGGTCAGTACCCGCTGG +
Preference number: 5 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPRAATR*GVSTRW
Trigger: CCAGCGGGTACTGACCCCCAACCTGGTGGCCGCCCT...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGACCAGCTTGCCCCCTaGGGCCTCCATGCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPDQLAP*GLHALA
Trigger: GGCGAGCGCATGGAGGCCCAAGGGGGCAAGCTGGTC...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp ACTGGTTGGGCTGACCTCGTGGCCTCAGCACAGGCGGCTTGTGGGTGCCAAGGTCTCAGCACAGGCGGCTaGTGGGTGCCAAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TGWADLVASAQAACGCQGLSTGG*WVPRSS
Trigger: GGAGGACCTTGGCACCCACAAGCCGCCTGTGCTGAG...ACCTTGGCACCCACAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS GCA 90 bp CTGACTGCGAGAGGTGGGTCTCCTCCTTCAGCACCACCACGTAGGTaGCAGGCAACCTCCACGGATCCTTGGCGCAGCGGTGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LTARGGSPPSAPPRR*QATSTDPWRSGGRW
Trigger: CCACCTTCCACCGCTGCGCCAAGGATCCGTGGAGGTTGCCTGGCACCTACGTGGTGGTGCTGAAGGAGGAGACCCACCTCTCGCAGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 90 bp CTGACTGCGAGAGGTGGGTCTCCTCCTTCAGCACCACCACGTAGGTaGCAGGCAACCTCCACGGATCCTGTGCCGCGGCGAGGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: LTARGGSPPSAPPRR*QATSTDPVPRRGRN
Trigger: GTTTCTGCCTCGCCGCGGCACAGGATCCGTGGAGGTTGCCTGGCACCTACGTGGTGGTGCTGAAGGAGGAGACCCACCTCTCGCAGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS CCA 90 bp TCCCCATGCTGGCCTCAGCTGGTGGAGCTGTGTGGACGCTGCAGTTaGCCTGGGGTAGCAGGCAGCACCTGGCAATGGCGTAGACACCCT +
Preference number: 5 (lower is better)
Translates to: SPCWPQLVELCGRCS*PGVAGSTWQWRRHP
Trigger: AGGGTGTCTACGCCATTGCCAGGTGCTGCCTGCTACCCCAGGCCAACTGCAGCGTCCACACAGCTCCACCAGCTGAGGCCAGCATGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673903.1
ENST00000673913.1
CDS CCA 90 bp TCGACGTCGCTGCGGAAACCTTCTAGGGTGTGGGTGCTTGACGCCTaGGGCGCGCAGATCACGCCACCAGAGCCCCATCGGACGATCCTA +
Preference number: 5 (lower is better)
Translates to: STSLRKPSRVWVLDA*GAQITPPEPHRTIL
Trigger: TAGGATCGTCCGATGGGGCTCTGGTGGCGTGATCTGCGCGCCCCAGGCGTCAAGCACCCACACCCTAGAAGGTTTCCGCAGCGACGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS CCA 90 bp TGTGCCGCGGCGAGGCAGAAACTGGGAAATCTGGGCAGGATATCCTaGCAGTGCTCTGCTCGCCCTTCCTCGGCCTCCGGGTCTCCCAAC +
Preference number: 5 (lower is better)
Translates to: CAAARQKLGNLGRIS*QCSARPSSASGSPN
Trigger: GTTGGGAGACCCGGAGGCCGAGGAAGGGCGAGCAGAGCACTGCCAGGATATCCTGCCCAGATTTCCCAGTTTCTGCCTCGCCGCGGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS-3UTR CAA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGCACGCCGGCGGCGCCTaGAGCCTTGCGGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQHAGGA*SLAVGR
Trigger: CCTCCCCACCGCAAGGCTCAAGGCGCCGCCGGCGTG...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CAA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGAACCTCCACGGATCCTaGGCGCAGCGGTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPNLHGS*AQRWKV
Trigger: CACCTTCCACCGCTGCGCCAAGGATCCGTGGAGGTT...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302118.5
CDS-3UTR CAA 90 bp GGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCGGCTGGTCTTGGGCATaGGTGGCCCCAACTGTGATG +
Preference number: 5 (lower is better)
Translates to: GGAGAQGGTVVGPLPRPCGWSWA*VAPTVM
Trigger: CATCACAGTTGGGGCCACCAATGCCCAAGACCAGCC...GCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACATCACCCCCAAAAGCGTaGTGGGCCCGGCAGACCAGC +
Preference number: 5 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTSPPKA*WARQTS
Trigger: GCTGGTCTGCCGGGCCCACAACGCTTTTGGGGGTGA...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCGTGTGGACGCTGCAGTaGGCCTGGGGTAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVVWTLQ*AWGSRQ
Trigger: CTGCCTGCTACCCCAGGCCAACTGCAGCGTCCACAC...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAGGCCAGTGTCCTGCTGTGTGAGCTaGGCAGGCACGCCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: VVGPLPRPCLRSISARPVSCCVS*AGTPPL
Trigger: CAGAGGGGGCGTGCCTGCCAAGCTCACACAGCAGGA...CACTGGCCTGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS GCA 90 bp CAGGCGGCTTGTGGGTGCCAAGGTCCTCCACCTCCCAGTGGGAGCTaGAGCCTGGGGCAGAGGAAAGCCAGCTCAGATGTGAAATGCTGG +
Preference number: 5 (lower is better)
Translates to: QAACGCQGPPPPSGS*SLGQRKASSDVKCW
Trigger: CCAGCATTTCACATCTGAGCTGGCTTTCCTCTGCCCCAGGCTGCAGCTCCCACTGGGAGGTGGAGGACCTTGGCACCCACAAGCCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS GCA 90 bp GAGGCAGAAACTGGGAAATCTGGGCAGGATATCCTGGCAGTGCTCTaGTCGCCCTTCCTCGGCCTCCGGGTCTCCCAACCCCGCGAACCT +
Preference number: 5 (lower is better)
Translates to: EAETGKSGQDILAVL*SPFLGLRVSQPREP
Trigger: AGGTTCGCGGGGTTGGGAGACCCGGAGGCCGAGGAAGGGCGAGCAGAGCACTGCCAGGATATCCTGCCCAGATTTCCCAGTTTCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS CCA 90 bp ATAAACTCCAGGCCTATGAGGGTGCCGCTAACCGTGCCCTTCCCTTaGCAGTTGAGCACGCGCAGGCTGCGCATGCTGGCACCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: INSRPMRVPLTVPFP*QLSTRRLRMLAPLA
Trigger: GGCCAAGGGTGCCAGCATGCGCAGCCTGCGCGTGCTCAACTGCCAAGGGAAGGGCACGGTTAGCGGCACCCTCATAGGCCTGGAGTTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS CCA 90 bp GCCTGGCCCTGGAACCCCTGCAGCCAGGAAAAGCAGGGCCTCAGGTaGAATCAGAGGGCAGCCCTCTGGGCTGTCAGTCAAACTGCTCCT +
Preference number: 5 (lower is better)
Translates to: AWPWNPCSQEKQGLR*NQRAALWAVSQTAP
Trigger: AGGAGCAGTTTGACTGACAGCCCAGAGGGCTGCCCTCTGATTCCACCTGAGGCCCTGCTTTTCCTGGCTGCAGGGGTTCCAGGGCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 90 bp GACTTCAGGCAGGTTGCTGCTAGCAGAGTCCTGCGCCAGCGGAAATaGCCTGGCCCTGGAACCCCTGCAGCCAGGAAAAGCAGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: DFRQVAASRVLRQRK*PGPGTPAARKSRAS
Trigger: TGAGGCCCTGCTTTTCCTGGCTGCAGGGGTTCCAGGGCCAGGCCATTTCCGCTGGCGCAGGACTCTGCTAGCAGCAACCTGCCTGAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 90 bp GCAAGAGCTAGGAAACCTGTGAGGACGTGGCCCTGTTGGTGGCAGTaGACACGGGTCCCCATGCTGGCCTCAGCTGGTGGAGCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: ARARKPVRTWPCWWQ*TRVPMLASAGGAVW
Trigger: CCACACAGCTCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTCACAGGTTTCCTAGCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS CCA 90 bp ACCTCCACGGATCCTGTGCCGCGGCGAGGCAGAAACTGGGAAATCTaGGCAGGATATCCTGGCAGTGCTCTGCTCGCCCTTCCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: TSTDPVPRRGRNWEI*AGYPGSALLALPRP
Trigger: AGGCCGAGGAAGGGCGAGCAGAGCACTGCCAGGATATCCTGCCCAGATTTCCCAGTTTCTGCCTCGCCGCGGCACAGGATCCGTGGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS-3UTR CAA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAAACCGTGCCCTTCCCTaGGCAGTTGAGCACGCGCAG +
Preference number: 5 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTNRALP*AVEHAQ
Trigger: CTGCGCGTGCTCAACTGCCAAGGGAAGGGCACGGTT...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGACACAGCGGCCAAAGTaGGTCCCCAAAGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPTQRPK*VPKVPR
Trigger: CCTGGGGACTTTGGGGACCAACTTTGGCCGCTGTGT...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CGGGATTCCATGCTCCTTGACTTTGCATTCCAGACCTGGGGCATGGCAGCAGGAGACCAGCTTGCCCCCTaGGGCCTCCATGCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: RDSMLLDFAFQTWGMAAGDQLAP*GLHALA
Trigger: GGCGAGCGCATGGAGGCCCAAGGGGGCAAGCTGGTC...TCCTGCTGCCATGCCCCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAATCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS CCA 90 bp TCTGAGGCAAGAGCTAGGAAACCTGTGAGGACGTGGCCCTGTTGGTaGCAGTGGACACGGGTCCCCATGCTGGCCTCAGCTGGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: SEARARKPVRTWPCW*QWTRVPMLASAGGA
Trigger: AGCTCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTCACAGGTTTCCTAGCTCTTGCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CAA 90 bp TTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCTCTCCCCCGAAGACATGCAGGATCTaGGTGAGGTATCCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: LLGWGWCSRRDSCWPSPPKTCRI*VRYPRR
Trigger: CCGCCGGGGATACCTCACCAAGATCCTGCATGTCTT...CGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGCGCATGCTGGCACCCTaGGCCACGCCGGCATCCCGG +
Preference number: 5 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLRMLAP*ATPASR
Trigger: CCGGGATGCCGGCGTGGCCAAGGGTGCCAGCATGCG...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGCGCTGGCAGGCGGCGTaGAGGACGCGGCTGTACCCA +
Preference number: 5 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLRWQAA*RTRLYP
Trigger: TGGGTACAGCCGCGTCCTCAACGCCGCCTGCCAGCG...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp AAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGTCGGCTGGTCTTGGGCATaGGTGGCCCCAACTGTGATG +
Preference number: 5 (lower is better)
Translates to: KVAQETKAQPVTTRGAPVGWSWA*VAPTVM
Trigger: CATCACAGTTGGGGCCACCAATGCCCAAGACCAGCC...GACAGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GAGCCAGCCCAATCTGCGTTTCTGGCTCAGTTCCTGCTGTGTGAGCTTGGCAGGGGTCACCGGCTGGTCTaGGGCATTGGTGGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: EPAQSAFLAQFLLCELGRGHRLV*GIGGPN
Trigger: GTTGGGGCCACCAATGCCCAAGACCAGCCGGTGACC...CCTGCCAAGCTCACACAGCAGGAACTGAGCCAGAAACGCAGATTGGGCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGAGGGCGGCCACCAGGTaGGGGGTCAGTACCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLRAATR*GVSTRW
Trigger: CCAGCGGGTACTGACCCCCAACCTGGTGGCCGCCCT...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GAGGGACAGTTGTTGGCCCTCTCCCCCGACCATGCCTTAGAAGCATCTCCGCCAACGGACATCGGCACATaGGGAGCAGCTGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: EGQLLALSPDHALEASPPTDIGT*GAAGST
Trigger: GGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGT...TGGCGGAGATGCTTCTAAGGCATGGTCGGGGGAGAGGGCCAACAACTGTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAAAGGAGGGACAGTTGTaGGCCCTCTCCCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTKEGQL*ALSPDH
Trigger: ATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTT...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTCTCAAGGAGGGACAGTaGTTGGCCCTCTCCCCCGAC +
Preference number: 5 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPLKEGQ*LALSPD
Trigger: GTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAG...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CGGTGGTCACTCTGTATGCTGGTGTCTAGGAGATACACCTCCACCAGGCTGCCTCTAGGGTGTGGGTGCTaGACGCCTGGGGCGCGCAGA +
Preference number: 5 (lower is better)
Translates to: RWSLCMLVSRRYTSTRLPLGCGC*TPGARR
Trigger: TCTGCGCGCCCCAGGCGTCAAGCACCCACACCCTAG...AGGCAGCCTGGTGGAGGTGTATCTCCTAGACACCAGCATACAGAGTGACCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS GCA 90 bp CCACTCATCTTCACCAGGAAGCCAGGAAGAAGGCCATGGAAGACATaGAGGATCTTGGTGAGGTATCCCCGGCGGGCAGCCTGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: PLIFTRKPGRRPWKT*RILVRYPRRAAWAC
Trigger: GCAGGCCCAGGCTGCCCGCCGGGGATACCTCACCAAGATCCTGCATGTCTTCCATGGCCTTCTTCCTGGCTTCCTGGTGAAGATGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS GCA 90 bp TGTCTGGCCACCTGCGCTGGCCGGCTCATTTTAGAGACAGGAAGCTaGAGCTCGGACAGGATGTATGTCTGGGCCTCCTGGCTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: CLATCAGRLILETGS*SSDRMYVWASWLQV
Trigger: GACCTGGAGCCAGGAGGCCCAGACATACATCCTGTCCGAGCTGCAGCTTCCTGTCTCTAAAATGAGCCGGCCAGCGCAGGTGGCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS-3UTR CAA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGGCATCGTCCCGGAAGTaGCCGGCAGCGGTGACCAGC +
Preference number: 5 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQASSRK*PAAVTS
Trigger: GCTGGTCACCGCTGCCGGCAACTTCCGGGACGATGC...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGGCCCGGCAGACCAGCTaGCCCCCTTGGGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLARQTS*PPWASM
Trigger: CATGGAGGCCCAAGGGGGCAAGCTGGTCTGCCGGGC...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGGAGGACGTGGCCCTGTaGGTGGCAGTGGACACGGGT +
Preference number: 5 (lower is better)
Translates to: WEESCLLGGDLRIECLAREDVAL*VAVDTG
Trigger: ACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTC...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTGGCCACCTTTGGGTGTaGCTAGCACAGCCTGGCATA +
Preference number: 5 (lower is better)
Translates to: HTAESVLGDGSPQATFGCGHLWV*LAQPGI
Trigger: TATGCCAGGCTGTGCTAGCAACACCCAAAGGTGGCC...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACAGGCCACCTTTGGGTGTaGCTAGCACAGCCTGGCATA +
Preference number: 5 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTGHLWV*LAQPGI
Trigger: TATGCCAGGCTGTGCTAGCAACACCCAAAGGTGGCC...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS TCA 90 bp CTTTGGCAGAGAAGTGGATCAGTCTCTGCCTCAACTCGGCCAGGGTaGGCTCCGGCTCGGCAGACAGCATCATGGCTGCAATGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LWQRSGSVSASTRPG*APARQTASWLQCQP
Trigger: TGGCTGGCATTGCAGCCATGATGCTGTCTGCCGAGCCGGAGCTCACCCTGGCCGAGTTGAGGCAGAGACTGATCCACTTCTCTGCCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS CCA 90 bp AGCAGGTCGCCACTCATCTTCACCAGGAAGCCAGGAAGAAGGCCATaGAAGACATGCAGGATCTTGGTGAGGTATCCCCGGCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SRSPLIFTRKPGRRP*KTCRILVRYPRRAA
Trigger: GGCTGCCCGCCGGGGATACCTCACCAAGATCCTGCATGTCTTCCATGGCCTTCTTCCTGGCTTCCTGGTGAAGATGAGTGGCGACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS-3UTR CAA 90 bp TCGAAGTCGGTGACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGAACCTCCACGGATCCTaGGCGCAGCGGTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SKSVTMTLPSISRWSLCMNLHGS*AQRWKV
Trigger: CACCTTCCACCGCTGCGCCAAGGATCCGTGGAGGTT...CATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGTCACCGACTTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS-3UTR CAA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGGGTCACCGGCTGGTCTaGGGCATTGGTGGCCCCAAC +
Preference number: 5 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQGHRLV*GIGGPN
Trigger: GTTGGGGCCACCAATGCCCAAGACCAGCCGGTGACC...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGTCACCCCCAAAAGCGTaGTGGGCCCGGCAGACCAGC +
Preference number: 5 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQSPPKA*WARQTS
Trigger: GCTGGTCTGCCGGGCCCACAACGCTTTTGGGGGTGA...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp ATTCCATGCTCCTTGACTTTGCATTCCAGACCTGGGGCATGGCAGCAGGAAGCGGTGTGGACGCTGCAGTaGGCCTGGGGTAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: IPCSLTLHSRPGAWQQEAVWTLQ*AWGSRQ
Trigger: CTGCCTGCTACCCCAGGCCAACTGCAGCGTCCACAC...CGCTTCCTGCTGCCATGCCCCAGGTCTGGAATGCAAAGTCAAGGAGCATGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS-3UTR CAA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGGAGGACGTGGCCCTGTaGGTGGCAGTGGACACGGGT +
Preference number: 5 (lower is better)
Translates to: ESCLLGGDLRIECLARNKEDVAL*VAVDTG
Trigger: ACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTC...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS TCA 90 bp CACTCTGTGACACAAAGCAGGTGCTGCAGTCGCTGGAGGCACCAATaGTGTCCTCCCCTGGGGCAAAGAGGTCCACACAGCGGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: HSVTQSRCCSRWRHQ*CPPLGQRGPHSGQS
Trigger: ACTTTGGCCGCTGTGTGGACCTCTTTGCCCCAGGGGAGGACATCATTGGTGCCTCCAGCGACTGCAGCACCTGCTTTGTGTCACAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS GCA 90 bp GGTCACTCTGTATGCTGGTGTCTAGGAGATACACCTCCACCAGGCTaGCTCCGTCTCCGCTCCAGCGCAGGTCTCAGAAACTCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: GHSVCWCLGDTPPPG*LRLRSSAGLRNSQP
Trigger: TGGCTGAGAGTTTCTGAGACCTGCGCTGGAGCGGAGACGGAGGCAGCCTGGTGGAGGTGTATCTCCTAGACACCAGCATACAGAGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS CCA 90 bp AAAGCAGGTGCTGCAGTCGCTGGAGGCACCAATGATGTCCTCCCCTaGGGCAAAGAGGTCCACACAGCGGCCAAAGTTGGTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: KAGAAVAGGTNDVLP*GKEVHTAAKVGPQS
Trigger: ACTTTGGGGACCAACTTTGGCCGCTGTGTGGACCTCTTTGCCCCAGGGGAGGACATCATTGGTGCCTCCAGCGACTGCAGCACCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS CCA 90 bp GAGACAGGAAGCTGCAGCTCGGACAGGATGTATGTCTGGGCCTCCTaGCTCCAGGTCCAAGCGTTCTCCACTCCACAAGATACCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ETGSCSSDRMYVWAS*LQVQAFSTPQDTRR
Trigger: CCTCCTGGTATCTTGTGGAGTGGAGAACGCTTGGACCTGGAGCCAGGAGGCCCAGACATACATCCTGTCCGAGCTGCAGCTTCCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS-3UTR CAA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCAACCGTGCCCTTCCCTaGGCAGTTGAGCACGCGCAG +
Preference number: 5 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTNRALP*AVEHAQ
Trigger: CTGCGCGTGCTCAACTGCCAAGGGAAGGGCACGGTT...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACACACAGCTCGACCTGTTaGAATGGTGAAATGCCCCAC +
Preference number: 5 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTHSSTC*NGEMPH
Trigger: GTGGGGCATTTCACCATTCAAACAGGTCGAGCTGTG...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGTCCTGCTGTGTGAGCTaGGCAGGCACGCCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLSCCVS*AGTPPL
Trigger: CAGAGGGGGCGTGCCTGCCAAGCTCACACAGCAGGA...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GCCAGGCCAGTGAATCAGGCCTGGGTGATAACGGAAAAAGTTCCATGCCTGCAGCTCAAGGAGGGACAGTaGTTGGCCCTCTCCCCCGAC +
Preference number: 5 (lower is better)
Translates to: ARPVNQAWVITEKVPCLQLKEGQ*LALSPD
Trigger: GTCGGGGGAGAGGGCCAACAACTGTCCCTCCTTGAG...CTGCAGGCATGGAACTTTTTCCGTTATCACCCAGGCCTGATTCACTGGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS GCA 90 bp CAGGCCTCATTGATGACATCTTTGGCAGAGAAGTGGATCAGTCTCTaGCTCAACTCGGCCAGGGTGAGCTCCGGCTCGGCAGACAGCATC +
Preference number: 5 (lower is better)
Translates to: QASLMTSLAEKWISL*LNSARVSSGSADSI
Trigger: GATGCTGTCTGCCGAGCCGGAGCTCACCCTGGCCGAGTTGAGGCAGAGACTGATCCACTTCTCTGCCAAAGATGTCATCAATGAGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS GCA 90 bp TCAGTCAAACTGCTCCTGCCCCAGGGTCTCCTGAGTCTTCTGAAGTaGCATCTGAACAGCACCTCTGTGGCCCCCGCAGTGATCCTCCAA +
Preference number: 5 (lower is better)
Translates to: SVKLLLPQGLLSLLK*HLNSTSVAPAVILQ
Trigger: TTGGAGGATCACTGCGGGGGCCACAGAGGTGCTGTTCAGATGGCACTTCAGAAGACTCAGGAGACCCTGGGGCAGGAGCAGTTTGACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 90 bp TCCTCAGGGAACCAGGCCTCATTGATGACATCTTTGGCAGAGAAGTaGATCAGTCTCTGCCTCAACTCGGCCAGGGTGAGCTCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: SSGNQASLMTSLAEK*ISLCLNSARVSSGS
Trigger: CGAGCCGGAGCTCACCCTGGCCGAGTTGAGGCAGAGACTGATCCACTTCTCTGCCAAAGATGTCATCAATGAGGCCTGGTTCCCTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS CCA 90 bp CAGGTGAGCAAGTGTGGGAGGCTCAGGGCGTGTACCCACTTCTTATaGCTTCGGTCACAAATTCCCAGACTCAGCAGCGAAGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: QVSKCGRLRACTHFL*LRSQIPRLSSEGSG
Trigger: CCCAGAGCCTTCGCTGCTGAGTCTGGGAATTTGTGACCGAAGCCATAAGAAGTGGGTACACGCCCTGAGCCTCCCACACTTGCTCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS-3UTR CAA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGACACAGCGGCCAAAGTaGGTCCCCAAAGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLTQRPK*VPKVPR
Trigger: CCTGGGGACTTTGGGGACCAACTTTGGCCGCTGTGT...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GTAAAGGTGGCTCAGGAAACCAAGGCACAGCCTGTGACCACCAGGGGCGCACCTGGGAACCAGGCCTCATaGATGACATCTTTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: VKVAQETKAQPVTTRGAPGNQAS*MTSLAE
Trigger: CTCTGCCAAAGATGTCATCAATGAGGCCTGGTTCCC...AGGTGCGCCCCTGGTGGTCACAGGCTGTGCCTTGGTTTCCTGAGCCACCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GATAAATGTCTGCTTGCTTGGGTGGGGCTGGTGCTCAAGGAGGGACAGTTGTTGACGGACATCGGCACATaGGGAGCAGCTGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: DKCLLAWVGLVLKEGQLLTDIGT*GAAGST
Trigger: GGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGT...CAACAACTGTCCCTCCTTGAGCACCAGCCCCACCCAAGCAAGCAGACATTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGAAGGAGGGACAGTTGTaGGCCCTCTCCCCCGACCAT +
Preference number: 5 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQKEGQL*ALSPDH
Trigger: ATGGTCGGGGGAGAGGGCCAACAACTGTCCCTCCTT...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS GCA 90 bp TTCTCCACTCCACAAGATACCAGGAGGGCTCACGGGGACTGCTTCTaGCTCACACGAGTCACAACCTCAGAGAAAACAGTCACCGAGCGC +
Preference number: 5 (lower is better)
Translates to: FSTPQDTRRAHGDCF*LTRVTTSEKTVTER
Trigger: GCGCTCGGTGACTGTTTTCTCTGAGGTTGTGACTCGTGTGAGGCAGAAGCAGTCCCCGTGAGCCCTCCTGGTATCTTGTGGAGTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS-3UTR CAA 90 bp ACCATGACCCTGCCCTCGATTTCCCGGTGGTCACTCTGTATGCTGGTGTCTAGGAAGACTTCAGGCAGGTaGCTGCTAGCAGAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: TMTLPSISRWSLCMLVSRKTSGR*LLAESC
Trigger: GCAGGACTCTGCTAGCAGCAACCTGCCTGAAGTCTT...CCTAGACACCAGCATACAGAGTGACCACCGGGAAATCGAGGGCAGGGTCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS GCA 90 bp GGTCACTCTGTATGCTGGTGTCTAGGAGATACACCTCCACCAGGCTaGCTCCGTCTTTCCAAGGCGACATTTGTGGGAGAGGAGGGAATG +
Preference number: 5 (lower is better)
Translates to: GHSVCWCLGDTPPPG*LRLSKATFVGEEGM
Trigger: CATTCCCTCCTCTCCCACAAATGTCGCCTTGGAAAGACGGAGGCAGCCTGGTGGAGGTGTATCTCCTAGACACCAGCATACAGAGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 90 bp GAGAAAGTAGGGAGAGCTCACAGATGCCAGGCAGGTCCAGCCTGCTaGATGGAGAAGGGAGAGAGGAAGAAAGGAAGCAAGGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: EKVGRAHRCQAGPAC*MEKGERKKGSKEGS
Trigger: GCTTCCTTCCTTGCTTCCTTTCTTCCTCTCTCCCTTCTCCATCCAGCAGGCTGGACCTGCCTGGCATCTGTGAGCTCTCCCTACTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS-3UTR CAA 90 bp TGGGAAGAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAAGATAAATGTCTGCTaGCTTGGGTGGGGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: WEESCLLGGDLRIECLARKINVC*LGWGWC
Trigger: GCACCAGCCCCACCCAAGCAAGCAGACATTTATCTT...CCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS GCA 90 bp CTGAACAGCACCTCTGTGGCCCCCGCAGTGATCCTCCAAATATGCTaGAGAGTAGAGATTCTCATCTCAGGACAGGTGAGCAAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LNSTSVAPAVILQIC*RVEILISGQVSKCG
Trigger: CCCACACTTGCTCACCTGTCCTGAGATGAGAATCTCTACTCTGCAGCATATTTGGAGGATCACTGCGGGGGCCACAGAGGTGCTGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 90 bp CTCATTTTAGAGACAGGAAGCTGCAGCTCGGACAGGATGTATGTCTaGGCCTCCTGGCTCCAGGTCCAAGCGTTCTCCACTCCACAAGAT +
Preference number: 5 (lower is better)
Translates to: LILETGSCSSDRMYV*ASWLQVQAFSTPQD
Trigger: ATCTTGTGGAGTGGAGAACGCTTGGACCTGGAGCCAGGAGGCCCAGACATACATCCTGTCCGAGCTGCAGCTTCCTGTCTCTAAAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS-3UTR CAA 90 bp CATTCTGCCCACGGACATCGGCACATTGGGAGCAGCTGGCAGCACCCGAGCACATCATTGATGACATCTTaGGCAGAGAAGTGGATCAGT +
Preference number: 5 (lower is better)
Translates to: HSAHGHRHIGSSWQHPSTSLMTS*AEKWIS
Trigger: ACTGATCCACTTCTCTGCCAAAGATGTCATCAATGA...TGTGCTCGGGTGCTGCCAGCTGCTCCCAATGTGCCGATGTCCGTGGGCAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CCATGGAGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGGGGAACCAGGCCTCATaGATGACATCTTTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PWRAERGTSRNHFKAQPQGNQAS*MTSLAE
Trigger: CTCTGCCAAAGATGTCATCAATGAGGCCTGGTTCCC...CTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCTCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp AGGGCTGAGAGAGGGACAAGTCGGAACCATTTTAAAGCTCAGCCCCAGCCCTTGCACAGCTCGACCTGTTaGAATGGTGAAATGCCCCAC +
Preference number: 5 (lower is better)
Translates to: RAERGTSRNHFKAQPQPLHSSTC*NGEMPH
Trigger: GTGGGGCATTTCACCATTCAAACAGGTCGAGCTGTG...CAAGGGCTGGGGCTGAGCTTTAAAATGGTTCCGACTTGTCCCTCTCTCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp GAATCCTGCCTCCTTGGTGGAGACCTGAGGATTGAATGCCTGGCACGGAACAAGAAGATAAATGTCTGCTaGCTTGGGTGGGGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: ESCLLGGDLRIECLARNKKINVC*LGWGWC
Trigger: GCACCAGCCCCACCCAAGCAAGCAGACATTTATCTT...CTTGTTCCGTGCCAGGCATTCAATCCTCAGGTCTCCACCAAGGAGGCAGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CACACTGCCGAGTCAGTCCTAGGTGATGGCTCCCCGCAGGCCACCTTTGGGTGTACAGGTCTAGAAAAGTaGGCTGTAAAAAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: HTAESVLGDGSPQATFGCTGLEK*AVKRQQ
Trigger: CTGTTGCCTTTTTACAGCCAACTTTTCTAGACCTGT...ACACCCAAAGGTGGCCTGCGGGGAGCCATCACCTAGGACTGACTCGGCAGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS TCA 90 bp CTTCATTCTCTCCTCAGGCCAGGTGCATCTAGAGTCTTCCCCGACTaGATTGCCACCTGCAAGTCCCTGCTAGAATGCAGACCGTTTTCC +
Preference number: 5 (lower is better)
Translates to: LHSLLRPGASRVFPD*IATCKSLLECRPFS
Trigger: GGAAAACGGTCTGCATTCTAGCAGGGACTTGCAGGTGGCAATTCAGTCGGGGAAGACTCTAGATGCACCTGGCCTGAGGAGAGAATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673662.1
CDS CCA 90 bp ATGCTGCAGAGTAGAGATTCTCATCTCAGGACAGGTGAGCAAGTGTaGGAGGCTCAGGGCGTGTACCCACTTCTTATGGCTTCGGTCACA +
Preference number: 5 (lower is better)
Translates to: MLQSRDSHLRTGEQV*EAQGVYPLLMASVT
Trigger: TGTGACCGAAGCCATAAGAAGTGGGTACACGCCCTGAGCCTCCCACACTTGCTCACCTGTCCTGAGATGAGAATCTCTACTCTGCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 90 bp ATCATCCCTAACTGGATCAGTTTGGATTCTCCAAGAAGCAGGCACTaGGGTAAAAGCTGCAAGAGACTCACTGGGGGAGTCGCCCATGCA +
Preference number: 5 (lower is better)
Translates to: IIPNWISLDSPRSRH*GKSCKRLTGGVAHA
Trigger: TGCATGGGCGACTCCCCCAGTGAGTCTCTTGCAGCTTTTACCCCAGTGCCTGCTTCTTGGAGAATCCAAACTGATCCAGTTAGGGATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 90 bp TTAAAGACTCAAAGGAGAATAACAGTGATGTCTGGCCACCTGCGCTaGCCGGCTCATTTTAGAGACAGGAAGCTGCAGCTCGGACAGGAT +
Preference number: 5 (lower is better)
Translates to: LKTQRRITVMSGHLR*PAHFRDRKLQLGQD
Trigger: ATCCTGTCCGAGCTGCAGCTTCCTGTCTCTAAAATGAGCCGGCCAGCGCAGGTGGCCAGACATCACTGTTATTCTCCTTTGAGTCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 90 bp ACCGAGCGCCTACCCTACACTTTATCATCCCTAACTGGATCAGTTTaGATTCTCCAAGAAGCAGGCACTGGGGTAAAAGCTGCAAGAGAC +
Preference number: 5 (lower is better)
Translates to: TERLPYTLSSLTGSV*ILQEAGTGVKAARD
Trigger: GTCTCTTGCAGCTTTTACCCCAGTGCCTGCTTCTTGGAGAATCCAAACTGATCCAGTTAGGGATGATAAAGTGTAGGGTAGGCGCTCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS-3UTR CAA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCTCATTGATGACATCTTaGGCAGAGAAGTGGATCAGT +
Preference number: 5 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTSLMTS*AEKWIS
Trigger: ACTGATCCACTTCTCTGCCAAAGATGTCATCAATGA...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS-3UTR CAA 90 bp CCCCCTCTGGTTCCAGGTTTCTTCCTCTGTGAAGTAGGGGTGCGAATGTGTACCACAGGTCTAGAAAAGTaGGCTGTAAAAAGGCAACAG +
Preference number: 5 (lower is better)
Translates to: PPLVPGFFLCEVGVRMCTTGLEK*AVKRQQ
Trigger: CTGTTGCCTTTTTACAGCCAACTTTTCTAGACCTGT...GGTACACATTCGCACCCCTACTTCACAGAGGAAGAAACCTGGAACCAGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS GCA 72 bp GGGCGCGCGGAATCCTGGCTGGGAGCTGGGAGCCGCTaGTGCAACGACGCGTCCCGGCCCGCCCGAGCCAGT +
Preference number: 6 (lower is better)
Translates to: GRAESWLGAGSR*CNDASRPARAS
Trigger: ACTGGCTCGGGCGGGCCGGGACGCGTCGTTGCAGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGCGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CCA 72 bp GCGCGTGAAGGGGCGCGCGGAATCCTGGCTGGGAGCTaGGAGCCGCTGCTGCAACGACGCGTCCCGGCCCGC +
Preference number: 6 (lower is better)
Translates to: AREGARGILAGS*EPLLQRRVPAR
Trigger: GCGGGCCGGGACGCGTCGTTGCAGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGCGCCCCTTCACGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CAA 72 bp ACGACCCCAGCCCTCGCCAGGCGCTGGCAGGCGGCGTaGAGGACGCGGCTGTACCCACCCGCCAGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: TTPALARRWQAA*RTRLYPPARGS
Trigger: GCTGCCCCTGGCGGGTGGGTACAGCCGCGTCCTCAACGCCGCCTGCCAGCGCCTGGCGAGGGCTGGGGTCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS GCA 72 bp CGCGCGGAATCCTGGCTGGGAGCTGGGAGCCGCTGCTaGAACGACGCGTCCCGGCCCGCCCGAGCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: RAESWLGAGSRC*NDASRPARASL
Trigger: GAGACTGGCTCGGGCGGGCCGGGACGCGTCGTTGCAGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CCA 72 bp GCGGTGACCAGCACGACCCCAGCCCTCGCCAGGCGCTaGCAGGCGGCGTTGAGGACGCGGCTGTACCCACCC +
Preference number: 6 (lower is better)
Translates to: AVTSTTPALARR*QAALRTRLYPP
Trigger: GGGTGGGTACAGCCGCGTCCTCAACGCCGCCTGCCAGCGCCTGGCGAGGGCTGGGGTCGTGCTGGTCACCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS CAA 90 bp GTGACCAGCACGACCCCAGCCCTCGCCAGGCGCTGGCAGGCGGCGTaGAGGACGCGGCTGTACCCACCCGCCAGGGGCAGCAGCACCACC +
Preference number: 6 (lower is better)
Translates to: VTSTTPALARRWQAA*RTRLYPPARGSSTT
Trigger: GGTGGTGCTGCTGCCCCTGGCGGGTGGGTACAGCCGCGTCCTCAACGCCGCCTGCCAGCGCCTGGCGAGGGCTGGGGTCGTGCTGGTCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS GCA 72 bp CCCGGCGGGCAGCCTGGGCCTGCAGGCGGCGGGCAGTaGGCTCTGACTGCGAGAGGTGGGTCTCCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: PGGQPGPAGGGQ*ALTARGGSPPS
Trigger: TGAAGGAGGAGACCCACCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGCAGGCCCAGGCTGCCCGCCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS CCA 72 bp GGGAGGCCTGCGCCAGGTGCCGGCTCCGGCAGCAGATaGCAACGGCTGTCACGGCCCCTTCGCTGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: GRPAPGAGSGSR*QRLSRPLRWCC
Trigger: GCAGCACCAGCGAAGGGGCCGTGACAGCCGTTGCCATCTGCTGCCGGAGCCGGCACCTGGCGCAGGCCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS TCA 72 bp AGAGGCAGGCATCGTCCCGGAAGTTGCCGGCAGCGGTaGCCAGCACGACCCCAGCCCTCGCCAGGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: RGRHRPGSCRQR*PARPQPSPGAG
Trigger: GCCAGCGCCTGGCGAGGGCTGGGGTCGTGCTGGTCACCGCTGCCGGCAACTTCCGGGACGATGCCTGCCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS CCA 72 bp TCAGGAGCAGGGCGCGTGAAGGGGCGCGCGGAATCCTaGCTGGGAGCTGGGAGCCGCTGCTGCAACGACGCG +
Preference number: 6 (lower is better)
Translates to: SGAGRVKGRAES*LGAGSRCCNDA
Trigger: CGCGTCGTTGCAGCAGCGGCTCCCAGCTCCCAGCCAGGATTCCGCGCGCCCCTTCACGCGCCCTGCTCCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CAA 90 bp TTCCCTTGGCAGTTGAGCACGCGCAGGCTGCGCATGCTGGCACCCTaGGCCACGCCGGCATCCCGGCCGCTGACCACCCCTGCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: FPWQLSTRRLRMLAP*ATPASRPLTTPARW
Trigger: CCACCTGGCAGGGGTGGTCAGCGGCCGGGATGCCGGCGTGGCCAAGGGTGCCAGCATGCGCAGCCTGCGCGTGCTCAACTGCCAAGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS TCA 72 bp GGCAGCCTGGGCCTGCAGGCGGCGGGCAGTGCGCTCTaGCTGCGAGAGGTGGGTCTCCTCCTTCAGCACCAC +
Preference number: 6 (lower is better)
Translates to: GSLGLQAAGSAL*LREVGLLLQHH
Trigger: GTGGTGCTGAAGGAGGAGACCCACCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGCAGGCCCAGGCTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS TCA 72 bp TGCTGGCACCCTTGGCCACGCCGGCATCCCGGCCGCTaGCCACCCCTGCCAGGTGGGTGCCATGACTGTCAC +
Preference number: 6 (lower is better)
Translates to: CWHPWPRRHPGR*PPLPGGCHDCH
Trigger: GTGACAGTCATGGCACCCACCTGGCAGGGGTGGTCAGCGGCCGGGATGCCGGCGTGGCCAAGGGTGCCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS GCA 72 bp GCCTGGGCCTGCAGGCGGCGGGCAGTGCGCTCTGACTaGGAGAGGTGGGTCTCCTCCTTCAGCACCACCACG +
Preference number: 6 (lower is better)
Translates to: AWACRRRAVRSD*ERWVSSFSTTT
Trigger: CGTGGTGGTGCTGAAGGAGGAGACCCACCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGCAGGCCCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS GCA 72 bp ATCTTGGTGAGGTATCCCCGGCGGGCAGCCTGGGCCTaGAGGCGGCGGGCAGTGCGCTCTGACTGCGAGAGG +
Preference number: 6 (lower is better)
Translates to: ILVRYPRRAAWA*RRRAVRSDCER
Trigger: CCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGCAGGCCCAGGCTGCCCGCCGGGGATACCTCACCAAGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS CCA 72 bp TGCAGGATCTTGGTGAGGTATCCCCGGCGGGCAGCCTaGGCCTGCAGGCGGCGGGCAGTGCGCTCTGACTGC +
Preference number: 6 (lower is better)
Translates to: CRILVRYPRRAA*ACRRRAVRSDC
Trigger: GCAGTCAGAGCGCACTGCCCGCCGCCTGCAGGCCCAGGCTGCCCGCCGGGGATACCTCACCAAGATCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS GCA 72 bp GCAGCGGTGGAAGGTGGCTGTGGTTCCGTGCTCGGGTaGTTCGGCCAGGCCGTCCTCCTCGGAACGCAAGGC +
Preference number: 6 (lower is better)
Translates to: AAVEGGCGSVLG*FGQAVLLGTQG
Trigger: GCCTTGCGTTCCGAGGAGGACGGCCTGGCCGAAGCACCCGAGCACGGAACCACAGCCACCTTCCACCGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 72 bp CTTGGCCACGCCGGCATCCCGGCCGCTGACCACCCCTaGCAGGTGGGTGCCATGACTGTCACACTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: LGHAGIPAADHP*QVGAMTVTLAG
Trigger: GCCAGCAAGTGTGACAGTCATGGCACCCACCTGGCAGGGGTGGTCAGCGGCCGGGATGCCGGCGTGGCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS CAA 90 bp TCCAGGCCTATGAGGGTGCCGCTAACCGTGCCCTTCCCTTGGCAGTaGAGCACGCGCAGGCTGCGCATGCTGGCACCCTTGGCCACGCCG +
Preference number: 6 (lower is better)
Translates to: SRPMRVPLTVPFPWQ*STRRLRMLAPLATP
Trigger: CGGCGTGGCCAAGGGTGCCAGCATGCGCAGCCTGCGCGTGCTCAACTGCCAAGGGAAGGGCACGGTTAGCGGCACCCTCATAGGCCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS TCA 72 bp CTGCCTGGCTCACTCCTCCAGGCTCAGACCCTGAACTaGACGGCGGCGCCCGCCTGCAACCATGAGCGCCTC +
Preference number: 6 (lower is better)
Translates to: LPGSLLQAQTLN*TAAPACNHERL
Trigger: GAGGCGCTCATGGTTGCAGGCGGGCGCCGCCGTTCAGTTCAGGGTCTGAGCCTGGAGGAGTGAGCCAGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 72 bp TCCTTGGCGCAGCGGTGGAAGGTGGCTGTGGTTCCGTaGTCGGGTGCTTCGGCCAGGCCGTCCTCCTCGGAA +
Preference number: 6 (lower is better)
Translates to: SLAQRWKVAVVP*SGASARPSSSE
Trigger: TTCCGAGGAGGACGGCCTGGCCGAAGCACCCGAGCACGGAACCACAGCCACCTTCCACCGCTGCGCCAAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 72 bp CGTGGCCCTGTTGGTGGCAGTGGACACGGGTCCCCATaGTGGCCTCAGCTGGTGGAGCTGTGTGGACGCTGC +
Preference number: 6 (lower is better)
Translates to: RGPVGGSGHGSP*WPQLVELCGRC
Trigger: GCAGCGTCCACACAGCTCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673903.1
ENST00000673913.1
CDS CCA 72 bp GACGCGTCCCGGCCCGCCCGAGCCAGTCTCACTGCCTaGCTCACTCCTCCAGGCTCAGACCCTGAACTGAAC +
Preference number: 6 (lower is better)
Translates to: DASRPARASLTA*LTPPGSDPELN
Trigger: GTTCAGTTCAGGGTCTGAGCCTGGAGGAGTGAGCCAGGCAGTGAGACTGGCTCGGGCGGGCCGGGACGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CCA 72 bp TCCACGGATCCTTGGCGCAGCGGTGGAAGGTGGCTGTaGTTCCGTGCTCGGGTGCTTCGGCCAGGCCGTCCT +
Preference number: 6 (lower is better)
Translates to: STDPWRSGGRWL*FRARVLRPGRP
Trigger: AGGACGGCCTGGCCGAAGCACCCGAGCACGGAACCACAGCCACCTTCCACCGCTGCGCCAAGGATCCGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS CCA 72 bp GCAACCTCCACGGATCCTTGGCGCAGCGGTGGAAGGTaGCTGTGGTTCCGTGCTCGGGTGCTTCGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: ATSTDPWRSGGR*LWFRARVLRPG
Trigger: GCCTGGCCGAAGCACCCGAGCACGGAACCACAGCCACCTTCCACCGCTGCGCCAAGGATCCGTGGAGGTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS TCA 72 bp GACTGTGCAGGAGCTGAAGTTCAGGAGCAGGGCGCGTaGAGGGGCGCGCGGAATCCTGGCTGGGAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: DCAGAEVQEQGA*RGARNPGWELG
Trigger: TCCCAGCTCCCAGCCAGGATTCCGCGCGCCCCTTCACGCGCCCTGCTCCTGAACTTCAGCTCCTGCACAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS TCA 72 bp TCCCGGCCGCTGACCACCCCTGCCAGGTGGGTGCCATaGCTGTCACACTTGCTGGCCTGTCTGTGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: SRPLTTPARWVP*LSHLLACLWKR
Trigger: CCGCTTCCACAGACAGGCCAGCAAGTGTGACAGTCATGGCACCCACCTGGCAGGGGTGGTCAGCGGCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS TCA 72 bp GACCCTGAACTGAACGGCGGCGCCCGCCTGCAACCATaGGCGCCTCGACGTCGCTGCGGAAACCTTCTAGGG +
Preference number: 6 (lower is better)
Translates to: DPELNGGARLQP*APRRRCGNLLG
Trigger: CCCTAGAAGGTTTCCGCAGCGACGTCGAGGCGCTCATGGTTGCAGGCGGGCGCCGCCGTTCAGTTCAGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS GCA 72 bp CCTCGACGTCGCTGCGGAAACCTTCTAGGGTGTGGGTaGTTGACGCCTGGGGCGCGCAGATCACGCCACCAG +
Preference number: 6 (lower is better)
Translates to: PRRRCGNLLGCG*LTPGARRSRHQ
Trigger: CTGGTGGCGTGATCTGCGCGCCCCAGGCGTCAAGCACCCACACCCTAGAAGGTTTCCGCAGCGACGTCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS CCA 72 bp CTGCAGCCTGTGAGGACGTGGCCCTGTTGGTGGCAGTaGACACGGGTCCCCATGCTGGCCTCAGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: LQPVRTWPCWWQ*TRVPMLASAGG
Trigger: TCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTCACAGGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS CCA 72 bp TGGGAGCTGCAGCCTGTGAGGACGTGGCCCTGTTGGTaGCAGTGGACACGGGTCCCCATGCTGGCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: WELQPVRTWPCW*QWTRVPMLASA
Trigger: AGCTGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTCACAGGCTGCAGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS CCA 72 bp CAGTGGGAGCTGCAGCCTGTGAGGACGTGGCCCTGTTaGTGGCAGTGGACACGGGTCCCCATGCTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: QWELQPVRTWPC*WQWTRVPMLAS
Trigger: TGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTCACAGGCTGCAGCTCCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS CCA 72 bp CTGCGGAAACCTTCTAGGGTGTGGGTGCTTGACGCCTaGGGCGCGCAGATCACGCCACCAGAGCCCCATCGG +
Preference number: 6 (lower is better)
Translates to: LRKPSRVWVLDA*GAQITPPEPHR
Trigger: CCGATGGGGCTCTGGTGGCGTGATCTGCGCGCCCCAGGCGTCAAGCACCCACACCCTAGAAGGTTTCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS CCA 72 bp AGCGCCTCGACGTCGCTGCGGAAACCTTCTAGGGTGTaGGTGCTTGACGCCTGGGGCGCGCAGATCACGCCA +
Preference number: 6 (lower is better)
Translates to: SASTSLRKPSRV*VLDAWGAQITP
Trigger: TGGCGTGATCTGCGCGCCCCAGGCGTCAAGCACCCACACCCTAGAAGGTTTCCGCAGCGACGTCGAGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS CAA 72 bp CGACGTCGCTGCGGAAACCTTCTAGGGTGTGGGTGCTaGACGCCTGGGGCGCGCAGATCACGCCACCAGAGC +
Preference number: 6 (lower is better)
Translates to: RRRCGNLLGCGC*TPGARRSRHQS
Trigger: GCTCTGGTGGCGTGATCTGCGCGCCCCAGGCGTCAAGCACCCACACCCTAGAAGGTTTCCGCAGCGACGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS TCA 72 bp TCTCACTGCCTGGCTCACTCCTCCAGGCTCAGACCCTaGACTGAACGGCGGCGCCCGCCTGCAACCATGAGC +
Preference number: 6 (lower is better)
Translates to: SHCLAHSSRLRP*TERRRPPATMS
Trigger: GCTCATGGTTGCAGGCGGGCGCCGCCGTTCAGTTCAGGGTCTGAGCCTGGAGGAGTGAGCCAGGCAGTGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 72 bp AGAGGTGGGTCTCCTCCTTCAGCACCACCACGTAGGTaGCAGGCAACCTCCACGGATCCTGTGCCGCGGCGA +
Preference number: 6 (lower is better)
Translates to: RGGSPPSAPPRR*QATSTDPVPRR
Trigger: TCGCCGCGGCACAGGATCCGTGGAGGTTGCCTGGCACCTACGTGGTGGTGCTGAAGGAGGAGACCCACCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS CCA 72 bp CAGCCTCCATGCGCTCGCCCCGCCGCTTCCCACTCCTaGAGAAACTGGAGCAGCTCAGCAGCTCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: QPPCARPAASHS*RNWSSSAAPHL
Trigger: CAGATGAGGAGCTGCTGAGCTGCTCCAGTTTCTCCAGGAGTGGGAAGCGGCGGGGCGAGCGCATGGAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CAA 72 bp ATGAGGGTGCCGCTAACCGTGCCCTTCCCTTGGCAGTaGAGCACGCGCAGGCTGCGCATGCTGGCACCCTTG +
Preference number: 6 (lower is better)
Translates to: MRVPLTVPFPWQ*STRRLRMLAPL
Trigger: CAAGGGTGCCAGCATGCGCAGCCTGCGCGTGCTCAACTGCCAAGGGAAGGGCACGGTTAGCGGCACCCTCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS CAA 90 bp TTCACCAGGAAGCCAGGAAGAAGGCCATGGAAGACATGCAGGATCTaGGTGAGGTATCCCCGGCGGGCAGCCTGGGCCTGCAGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: FTRKPGRRPWKTCRI*VRYPRRAAWACRRR
Trigger: CCGCCGCCTGCAGGCCCAGGCTGCCCGCCGGGGATACCTCACCAAGATCCTGCATGTCTTCCATGGCCTTCTTCCTGGCTTCCTGGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS TCA 72 bp CAGGAAGAAGGCCATGGAAGACATGCAGGATCTTGGTaGGGTATCCCCGGCGGGCAGCCTGGGCCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: QEEGHGRHAGSW*GIPGGQPGPAG
Trigger: GCCTGCAGGCCCAGGCTGCCCGCCGGGGATACCTCACCAAGATCCTGCATGTCTTCCATGGCCTTCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS GCA 72 bp AGAGGTGGGTCTCCTCCTTCAGCACCACCACGTAGGTaGCAGGCAACCTCCACGGATCCTTGGCGCAGCGGT +
Preference number: 6 (lower is better)
Translates to: RGGSPPSAPPRR*QATSTDPWRSG
Trigger: ACCGCTGCGCCAAGGATCCGTGGAGGTTGCCTGGCACCTACGTGGTGGTGCTGAAGGAGGAGACCCACCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673726.1
CDS GCA 72 bp AGGAAGACTTCAGGCAGGTTGCTGCTAGCAGAGTCCTaGGCCAGCGGAAATGGCCTGGCCCTGGAACCCCGG +
Preference number: 6 (lower is better)
Translates to: RKTSGRLLLAES*ASGNGLALEPR
Trigger: CCGGGGTTCCAGGGCCAGGCCATTTCCGCTGGCGCAGGACTCTGCTAGCAGCAACCTGCCTGAAGTCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS GCA 72 bp ACTGGGAAATCTGGGCAGGATATCCTGGCAGTGCTCTaGTCGCCCTTCCTCGGCCTCCGGGTCTCCCAACCC +
Preference number: 6 (lower is better)
Translates to: TGKSGQDILAVL*SPFLGLRVSQP
Trigger: GGGTTGGGAGACCCGGAGGCCGAGGAAGGGCGAGCAGAGCACTGCCAGGATATCCTGCCCAGATTTCCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS CCA 72 bp AGGAAACCTGTGAGGACGTGGCCCTGTTGGTGGCAGTaGACACGGGTCCCCATGCTGGCCTCAGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: RKPVRTWPCWWQ*TRVPMLASAGG
Trigger: TCCACCAGCTGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTCACAGGTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS CCA 72 bp GCGAGGCAGAAACTGGGAAATCTGGGCAGGATATCCTaGCAGTGCTCTGCTCGCCCTTCCTCGGCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: ARQKLGNLGRIS*QCSARPSSASG
Trigger: CCCGGAGGCCGAGGAAGGGCGAGCAGAGCACTGCCAGGATATCCTGCCCAGATTTCCCAGTTTCTGCCTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS CAA 72 bp CCCAAAGTCCCCAGGGTCACCGGCTGGTCTTGGGCATaGGTGGCCCCAACTGTGATGACCTCGGGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: PKVPRVTGWSWA*VAPTVMTSGAE
Trigger: CTCAGCTCCCGAGGTCATCACAGTTGGGGCCACCAATGCCCAAGACCAGCCGGTGACCCTGGGGACTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS CAA 90 bp AATAAACTCCAGGCCTATGAGGGTGCCGCTAACCGTGCCCTTCCCTaGGCAGTTGAGCACGCGCAGGCTGCGCATGCTGGCACCCTTGGC +
Preference number: 6 (lower is better)
Translates to: NKLQAYEGAANRALP*AVEHAQAAHAGTLG
Trigger: GCCAAGGGTGCCAGCATGCGCAGCCTGCGCGTGCTCAACTGCCAAGGGAAGGGCACGGTTAGCGGCACCCTCATAGGCCTGGAGTTTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS GCA 72 bp TCCCAGACTCAGCAGCGAAGGCTCTGGGAAGAACCCTaGCTCACGTCTTCCGGCTTCTGGTGGCTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SQTQQRRLWEEP*LTSSGFWWLLV
Trigger: CACCAGCAGCCACCAGAAGCCGGAAGACGTGAGGCAGGGTTCTTCCCAGAGCCTTCGCTGCTGAGTCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS GCA 72 bp AGGAAGACTTCAGGCAGGTTGCTGCTAGCAGAGTCCTaGGCCAGCGGAAATGGCCTGGCCCTGGAACCCCTG +
Preference number: 6 (lower is better)
Translates to: RKTSGRLLLAES*ASGNGLALEPL
Trigger: CAGGGGTTCCAGGGCCAGGCCATTTCCGCTGGCGCAGGACTCTGCTAGCAGCAACCTGCCTGAAGTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS GCA 72 bp CAGAAACTGGGAAATCTGGGCAGGATATCCTGGCAGTaGTCTGCTCGCCCTTCCTCGGCCTCCGGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: QKLGNLGRISWQ*SARPSSASGSP
Trigger: GGGAGACCCGGAGGCCGAGGAAGGGCGAGCAGAGCACTGCCAGGATATCCTGCCCAGATTTCCCAGTTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS CCA 72 bp AGAGCTAGGAAACCTGTGAGGACGTGGCCCTGTTGGTaGCAGTGGACACGGGTCCCCATGCTGGCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: RARKPVRTWPCW*QWTRVPMLASA
Trigger: AGCTGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTCACAGGTTTCCTAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS CCA 72 bp GCAAGAGCTAGGAAACCTGTGAGGACGTGGCCCTGTTaGTGGCAGTGGACACGGGTCCCCATGCTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: ARARKPVRTWPC*WQWTRVPMLAS
Trigger: TGAGGCCAGCATGGGGACCCGTGTCCACTGCCACCAACAGGGCCACGTCCTCACAGGTTTCCTAGCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673913.1
CDS CAA 72 bp AAGCCAGGAAGAAGGCCATGGAAGACATGCAGGATCTaGGTGAGGTATCCCCGGCGGGCAGCCTGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: KPGRRPWKTCRI*VRYPRRAAWAC
Trigger: GCAGGCCCAGGCTGCCCGCCGGGGATACCTCACCAAGATCCTGCATGTCTTCCATGGCCTTCTTCCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000673726.1
ENST00000673903.1
CDS TCA 72 bp GACGGCTGTGGCCATCCGTGTAGGCCCCGAGTGTGCTaGCCATACAGTCCTGCAAAACAGCTGCCAACCTGC +
Preference number: 6 (lower is better)
Translates to: DGCGHPCRPRVC*PYSPAKQLPTC
Trigger: GCAGGTTGGCAGCTGTTTTGCAGGACTGTATGGTCAGCACACTCGGGGCCTACACGGATGGCCACAGCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
ENST00000673913.1
CDS CCA 72 bp GATCCTGTGCCGCGGCGAGGCAGAAACTGGGAAATCTaGGCAGGATATCCTGGCAGTGCTCTGCTCGCCCTT +
Preference number: 6 (lower is better)
Translates to: DPVPRRGRNWEI*AGYPGSALLAL
Trigger: AAGGGCGAGCAGAGCACTGCCAGGATATCCTGCCCAGATTTCCCAGTTTCTGCCTCGCCGCGGCACAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS CCA 72 bp ACCTCCACGGATCCTGTGCCGCGGCGAGGCAGAAACTaGGAAATCTGGGCAGGATATCCTGGCAGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: TSTDPVPRRGRN*EIWAGYPGSAL
Trigger: CAGAGCACTGCCAGGATATCCTGCCCAGATTTCCCAGTTTCTGCCTCGCCGCGGCACAGGATCCGTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673903.1
CDS CAA 90 bp GGTCTCAGAAACTCTCAGCCAGGCCAAAGGAAGACTTCAGGCAGGTaGCTGCTAGCAGAGTCCTGCGCCAGCGGAAATGGCCTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: GLRNSQPGQRKTSGR*LLAESCASGNGLAL
Trigger: CAGGGCCAGGCCATTTCCGCTGGCGCAGGACTCTGCTAGCAGCAACCTGCCTGAAGTCTTCCTTTGGCCTGGCTGAGAGTTTCTGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490692.1
ENST00000673726.1
CDS TCA 72 bp ACACAAAGCAGGTGCTGCAGTCGCTGGAGGCACCAATaGTGTCCTCCCCTGGGGCAAAGAGGTCCACACAGC +
Preference number: 6 (lower is better)
Translates to: TQSRCCSRWRHQ*CPPLGQRGPHS
Trigger: GCTGTGTGGACCTCTTTGCCCCAGGGGAGGACATCATTGGTGCCTCCAGCGACTGCAGCACCTGCTTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302118.5
ENST00000673903.1
CDS TCA 72 bp AGAAGTGGATCAGTCTCTGCCTCAACTCGGCCAGGGTaGGCTCCGGCTCGGCAGACAGCATCATGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: RSGSVSASTRPG*APARQTASWLQ
Trigger: TTGCAGCCATGATGCTGTCTGCCGAGCCGGAGCTCACCCTGGCCGAGTTGAGGCAGAGACTGATCCACTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS GCA 72 bp ACCTGCGCTGGCCGGCTCATTTTAGAGACAGGAAGCTaGAGCTCGGACAGGATGTATGTCTGGGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: TCAGRLILETGS*SSDRMYVWASW
Trigger: CCAGGAGGCCCAGACATACATCCTGTCCGAGCTGCAGCTTCCTGTCTCTAAAATGAGCCGGCCAGCGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS GCA 72 bp GTATGCTGGTGTCTAGGAGATACACCTCCACCAGGCTaGCTCCGTCTCCGCTCCAGCGCAGGTCTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: VCWCLGDTPPPG*LRLRSSAGLRN
Trigger: GTTTCTGAGACCTGCGCTGGAGCGGAGACGGAGGCAGCCTGGTGGAGGTGTATCTCCTAGACACCAGCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673726.1
CDS CCA 72 bp GAGACAGGAAGCTGCAGCTCGGACAGGATGTATGTCTaGGCCTCCTGGCTCCAGGTCCAAGCGTTCTCCACT +
Preference number: 6 (lower is better)
Translates to: ETGSCSSDRMYV*ASWLQVQAFST
Trigger: AGTGGAGAACGCTTGGACCTGGAGCCAGGAGGCCCAGACATACATCCTGTCCGAGCTGCAGCTTCCTGTCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 72 bp AGCTGCAGCTCGGACAGGATGTATGTCTGGGCCTCCTaGCTCCAGGTCCAAGCGTTCTCCACTCCACAAGAT +
Preference number: 6 (lower is better)
Translates to: SCSSDRMYVWAS*LQVQAFSTPQD
Trigger: ATCTTGTGGAGTGGAGAACGCTTGGACCTGGAGCCAGGAGGCCCAGACATACATCCTGTCCGAGCTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CAA 72 bp AACTCTCAGCCAGGCCAAAGGAAGACTTCAGGCAGGTaGCTGCTAGCAGAGTCCTGCGCCAGCGGAAATGGC +
Preference number: 6 (lower is better)
Translates to: NSQPGQRKTSGR*LLAESCASGNG
Trigger: GCCATTTCCGCTGGCGCAGGACTCTGCTAGCAGCAACCTGCCTGAAGTCTTCCTTTGGCCTGGCTGAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000490692.1
ENST00000673726.1
CDS CAA 90 bp AGTACCCGCTGGTCCTCAGGGAACCAGGCCTCATTGATGACATCTTaGGCAGAGAAGTGGATCAGTCTCTGCCTCAACTCGGCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: STRWSSGNQASLMTS*AEKWISLCLNSARV
Trigger: CACCCTGGCCGAGTTGAGGCAGAGACTGATCCACTTCTCTGCCAAAGATGTCATCAATGAGGCCTGGTTCCCTGAGGACCAGCGGGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS TCA 72 bp CTCCTCAGGCCAGGTGCATCTAGAGTCTTCCCCGACTaGATTGCCACCTGCAAGTCCCTGCTAGAATGCAGA +
Preference number: 6 (lower is better)
Translates to: LLRPGASRVFPD*IATCKSLLECR
Trigger: TCTGCATTCTAGCAGGGACTTGCAGGTGGCAATTCAGTCGGGGAAGACTCTAGATGCACCTGGCCTGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673662.1
CDS GCA 72 bp GTATGCTGGTGTCTAGGAGATACACCTCCACCAGGCTaGCTCCGTCTTTCCAAGGCGACATTTGTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: VCWCLGDTPPPG*LRLSKATFVGE
Trigger: CTCTCCCACAAATGTCGCCTTGGAAAGACGGAGGCAGCCTGGTGGAGGTGTATCTCCTAGACACCAGCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 72 bp AACCAGGCCTCATTGATGACATCTTTGGCAGAGAAGTaGATCAGTCTCTGCCTCAACTCGGCCAGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: NQASLMTSLAEK*ISLCLNSARVS
Trigger: GCTCACCCTGGCCGAGTTGAGGCAGAGACTGATCCACTTCTCTGCCAAAGATGTCATCAATGAGGCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302118.5
ENST00000490692.1
ENST00000673903.1
CDS CCA 72 bp AAGTGTGGGAGGCTCAGGGCGTGTACCCACTTCTTATaGCTTCGGTCACAAATTCCCAGACTCAGCAGCGAA +
Preference number: 6 (lower is better)
Translates to: KCGRLRACTHFL*LRSQIPRLSSE
Trigger: TTCGCTGCTGAGTCTGGGAATTTGTGACCGAAGCCATAAGAAGTGGGTACACGCCCTGAGCCTCCCACACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 72 bp CAAAGGAGAATAACAGTGATGTCTGGCCACCTGCGCTaGCCGGCTCATTTTAGAGACAGGAAGCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: QRRITVMSGHLR*PAHFRDRKLQL
Trigger: GAGCTGCAGCTTCCTGTCTCTAAAATGAGCCGGCCAGCGCAGGTGGCCAGACATCACTGTTATTCTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 72 bp AGTAGAGATTCTCATCTCAGGACAGGTGAGCAAGTGTaGGAGGCTCAGGGCGTGTACCCACTTCTTATGGCT +
Preference number: 6 (lower is better)
Translates to: SRDSHLRTGEQV*EAQGVYPLLMA
Trigger: AGCCATAAGAAGTGGGTACACGCCCTGAGCCTCCCACACTTGCTCACCTGTCCTGAGATGAGAATCTCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 72 bp CACCGAGCGCCTACCCTACACTTTATCATCCCTAACTaGATCAGTTTGGATTCTCCAAGAAGCAGGCACTGG +
Preference number: 6 (lower is better)
Translates to: HRAPTLHFIIPN*ISLDSPRSRHW
Trigger: CCAGTGCCTGCTTCTTGGAGAATCCAAACTGATCCAGTTAGGGATGATAAAGTGTAGGGTAGGCGCTCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CAA 90 bp CACCGAGCGCCTACCCTACACTTTATCATCCCTAACTGGATCAGTTaGGATTCTCCAAGAAGCAGGCACTGGGGTAAAAGCTGCAAGAGA +
Preference number: 6 (lower is better)
Translates to: HRAPTLHFIIPNWIS*DSPRSRHWGKSCKR
Trigger: TCTCTTGCAGCTTTTACCCCAGTGCCTGCTTCTTGGAGAATCCAAACTGATCCAGTTAGGGATGATAAAGTGTAGGGTAGGCGCTCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CAA 72 bp CCTACCCTACACTTTATCATCCCTAACTGGATCAGTTaGGATTCTCCAAGAAGCAGGCACTGGGGTAAAAGC +
Preference number: 6 (lower is better)
Translates to: PTLHFIIPNWIS*DSPRSRHWGKS
Trigger: GCTTTTACCCCAGTGCCTGCTTCTTGGAGAATCCAAACTGATCCAGTTAGGGATGATAAAGTGTAGGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS CCA 72 bp CTACCCTACACTTTATCATCCCTAACTGGATCAGTTTaGATTCTCCAAGAAGCAGGCACTGGGGTAAAAGCT +
Preference number: 6 (lower is better)
Translates to: LPYTLSSLTGSV*ILQEAGTGVKA
Trigger: AGCTTTTACCCCAGTGCCTGCTTCTTGGAGAATCCAAACTGATCCAGTTAGGGATGATAAAGTGTAGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490692.1
CDS TCA 72 bp TGCCAAGAAGGACCCAAGTCATCCTGCTCCTTCATATaGATATCAATATCTAACAATAATATGAATGTTCAA +
Preference number: 6 (lower is better)
Translates to: CQEGPKSSCSFI*ISISNNNMNVQ
Trigger: TTGAACATTCATATTATTGTTAGATATTGATATTCATATGAAGGAGCAGGATGACTTGGGTCCTTCTTGGCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490692.1