RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCSK6 (Homo sapiens)

Ensembl gene IDs: ENSG00000140479

Ensembl transcript IDs: ENST00000331826.12, ENST00000398185.6, ENST00000557794.5, ENST00000558154.2, ENST00000558433.5, ENST00000558864.5, ENST00000558951.5, ENST00000559417.2, ENST00000559430.1, ENST00000559499.1, ENST00000559605.1, ENST00000560785.1, ENST00000560902.5, ENST00000611716.5, ENST00000611967.4, ENST00000615296.4, ENST00000618548.4, ENST00000619160.4, ENST00000622483.4, ENST00000632686.1, ENST00000676494.1, ENST00000676598.1, ENST00000677364.1, ENST00000677528.1, ENST00000677962.1, ENST00000677996.1, ENST00000678381.1, ENST00000678918.1, ENST00000679007.1

Found 2410 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGAGTGCCTGCCCTCTGTGGGCAGCTA +
Preference number: 1 (lower is better)
Translates to: GAAPETDSGRQSGGR*TDGWMGVPALCGQL
Trigger: TAGCTGCCCACAGAGGGCAGGCACTCCCATCCATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
3UTR CCA 90 bp CCGTCCCCAGACTGCTCAGTGGCAGGCAACGAGCAGGTAGACTGCTaGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: PSPDCSVAGNEQVDC*PFVTCEDGPGFASW
Trigger: CCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCCTGCCACTGAGCAGTCTGGGGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR TCA 90 bp GCTGCTCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGG +
Preference number: 1 (lower is better)
Translates to: AAPGEIKLSGAGRRS*NRLWPTVWRKVDGW
Trigger: CCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
3UTR TCA 90 bp GGCACCCTTACCCGGCCAGGAGGCACGTGCGGCAGCAGAACTGAATaGAGAGCTTCCGTTCGCACAGCCGGTTGGACTTCACCATCTCGC +
Preference number: 1 (lower is better)
Translates to: GTLTRPGGTCGSRTE*RASVRTAGWTSPSR
Trigger: GCGAGATGGTGAAGTCCAACCGGCTGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCACGTGCCTCCTGGCCGGGTAAGGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR GCA 90 bp CTCCTTAAGAGCCACCACCCACCTGGCTTGGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTG +
Preference number: 1 (lower is better)
Translates to: LLKSHHPPGLGAQRC*SWGDKAVRCRAPLL
Trigger: CAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTCTTAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 90 bp CACCTCCTTAAGAGCCACCACCCACCTGGCTTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTC +
Preference number: 1 (lower is better)
Translates to: HLLKSHHPPGLGAQR*CSWGDKAVRCRAPL
Trigger: GAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTCTTAAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR TCA 90 bp GCTAGGCACCCTTACCCGGCCAGGAGGCACGTGCGGCAGCAGAACTaGATGAAGAGCTTCCGTTCGCACAGCCGGTTGGACTTCACCATC +
Preference number: 1 (lower is better)
Translates to: ARHPYPARRHVRQQN*MKSFRSHSRLDFTI
Trigger: GATGGTGAAGTCCAACCGGCTGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCACGTGCCTCCTGGCCGGGTAAGGGTGCCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR GCA 90 bp AAACCGTCCCCAGACTGCTCAGTGGCAGGCAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGC +
Preference number: 1 (lower is better)
Translates to: KPSPDCSVAGNEQVD*WPFVTCEDGPGFAS
Trigger: GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR TCA 90 bp AGTGGCAGGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTaGGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTA +
Preference number: 1 (lower is better)
Translates to: SGRQRAGRLLALCHM*GWPRVRQLGRGDLL
Trigger: TAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCCTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR TCA 90 bp GGCCATGGAGAGAAGGGCAGTGCTGCCGTACAGAGAGGGTCCAGGTaGCATTTAATGCCGGCTCCAGCTTTCCCAAGGCTCTGCTGCACC +
Preference number: 1 (lower is better)
Translates to: GHGEKGSAAVQRGSR*HLMPAPAFPRLCCT
Trigger: GGTGCAGCAGAGCCTTGGGAAAGCTGGAGCCGGCATTAAATGTCACCTGGACCCTCTCTGTACGGCAGCACTGCCCTTCTCTCCATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 90 bp TTGGGTGCTCAGAGATGCTGCTCCTGGGGAGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAG +
Preference number: 1 (lower is better)
Translates to: LGAQRCCSWGDKAVR*RAPLLKQTLADSLE
Trigger: CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 90 bp TGTCCCATCAACTGGAGAAGGCGGCCATGGAGAGAAGGGCAGTGCTaGCGTACAGAGAGGGTCCAGGTGACATTTAATGCCGGCTCCAGC +
Preference number: 1 (lower is better)
Translates to: CPINWRRRPWREGQC*RTERVQVTFNAGSS
Trigger: GCTGGAGCCGGCATTAAATGTCACCTGGACCCTCTCTGTACGGCAGCACTGCCCTTCTCTCCATGGCCGCCTTCTCCAGTTGATGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR TCA 90 bp GCTCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTGCGATCTaGACCTGGGTCTATCCAGCATTACTCATGCCCCTTCCACCTCAT +
Preference number: 1 (lower is better)
Translates to: AHPACTQPVSGRAAI*TWVYPALLMPLPPH
Trigger: ATGAGGTGGAAGGGGCATGAGTAATGCTGGATAGACCCAGGTTCAGATCGCAGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR GCA 90 bp TTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTaGCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCA +
Preference number: 1 (lower is better)
Translates to: LAIGVPFGWPQNASC*LSSEGSASGRGGRS
Trigger: TGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 90 bp TCAACCAGCTCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTaGGATCTGAACCTGGGTCTATCCAGCATTACTCATGCCCCTTCC +
Preference number: 1 (lower is better)
Translates to: STSSPGMHAASKWES*DLNLGLSSITHAPS
Trigger: GGAAGGGGCATGAGTAATGCTGGATAGACCCAGGTTCAGATCGCAGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGAGCTGGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR CCA 90 bp TTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATaGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACC +
Preference number: 1 (lower is better)
Translates to: FSDYRQCKGCMLSAT*AGTSRVVHQWGVST
Trigger: GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
3UTR CCA 90 bp GGGCAAGCCCGGCATCTCTTCTGGGTAGAAGCCCTCACCACAGGCTaGCACACACTTCCAGTCGTGGAAGTGGAAGTTTTTCGCACAGTG +
Preference number: 1 (lower is better)
Translates to: GQARHLFWVEALTTG*HTLPVVEVEVFRTV
Trigger: CACTGTGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGCTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 90 bp GCTGGAGGTCTTGTCATTTGTCCCATCAACTGGAGAAGGCGGCCATaGAGAGAAGGGCAGTGCTGCCGTACAGAGAGGGTCCAGGTGACA +
Preference number: 1 (lower is better)
Translates to: AGGLVICPINWRRRP*REGQCCRTERVQVT
Trigger: TGTCACCTGGACCCTCTCTGTACGGCAGCACTGCCCTTCTCTCCATGGCCGCCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 90 bp CTCCTGAAGACACAGACAGAACACGGTAACAAGGAGAGCTCGGCTTaGTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGC +
Preference number: 1 (lower is better)
Translates to: LLKTQTEHGNKESSA*SKESAAGDRIFWSG
Trigger: GCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTGTGTCTTCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CCA 90 bp CTTCACTGCCTCACACGCACAACTCTGGTCAATTGGTGCTTGTGGTaGCCAGCTGTTGGGTTGTGTGACTTGCCCTGCCTTCTGAGAGCT +
Preference number: 1 (lower is better)
Translates to: LHCLTRTTLVNWCLW*PAVGLCDLPCLLRA
Trigger: AGCTCTCAGAAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR TCA 90 bp TGCTTGCACGCACACGCATTCATGCAGTCAATCAACAACTGTTTGTaGGCCATGTCCAAAGTGCTGAGCCTCTGGGGGCGGGAGCTGAGA +
Preference number: 1 (lower is better)
Translates to: CLHAHAFMQSINNCL*AMSKVLSLWGRELR
Trigger: TCTCAGCTCCCGCCCCCAGAGGCTCAGCACTTTGGACATGGCTCACAAACAGTTGTTGATTGACTGCATGAATGCGTGTGCGTGCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR GCA 90 bp CTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACCTTCGACACACTTTGTG +
Preference number: 1 (lower is better)
Translates to: LCEARLTPATVPAGA*TAQAVLVTPSTHFV
Trigger: CACAAAGTGTGTCGAAGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 90 bp CACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCTCCTGGGGAGATAAAGCTGTCAGGT +
Preference number: 1 (lower is better)
Translates to: HHFRNTSLRATTHLA*VLRDAAPGEIKLSG
Trigger: ACCTGACAGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CCA 90 bp TTCCTTCACTGCCTCACACGCACAACTCTGGTCAATTGGTGCTTGTaGTGGCCAGCTGTTGGGTTGTGTGACTTGCCCTGCCTTCTGAGA +
Preference number: 1 (lower is better)
Translates to: FLHCLTRTTLVNWCL*WPAVGLCDLPCLLR
Trigger: TCTCAGAAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 90 bp CACTTATTCCTTCACTGCCTCACACGCACAACTCTGGTCAATTGGTaGTTGTGGTGGCCAGCTGTTGGGTTGTGTGACTTGCCCTGCCTT +
Preference number: 1 (lower is better)
Translates to: HLFLHCLTRTTLVNW*LWWPAVGLCDLPCL
Trigger: AAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAGGAATAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 90 bp TTTTACCTGGAAGATGCTGGAGGTCTTGTCATTTGTCCCATCAACTaGAGAAGGCGGCCATGGAGAGAAGGGCAGTGCTGCCGTACAGAG +
Preference number: 1 (lower is better)
Translates to: FYLEDAGGLVICPIN*RRRPWREGQCCRTE
Trigger: CTCTGTACGGCAGCACTGCCCTTCTCTCCATGGCCGCCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTCCAGGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 90 bp ACACACTTATTCCTTCACTGCCTCACACGCACAACTCTGGTCAATTaGTGCTTGTGGTGGCCAGCTGTTGGGTTGTGTGACTTGCCCTGC +
Preference number: 1 (lower is better)
Translates to: THLFLHCLTRTTLVN*CLWWPAVGLCDLPC
Trigger: GCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAGGAATAAGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 90 bp CCTCAAACCTATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAGCAGGTAGACTGCTGGCCCTTTGTC +
Preference number: 1 (lower is better)
Translates to: PQTYLIYSLTKPSPD*SVAGNEQVDCWPFV
Trigger: GACAAAGGGCCAGCAGTCTACCTGCTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATAGGTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 90 bp TTTAACCCAAAACATGGTTTCTCTGATTATCGACAGTGCAAAGGATaGATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCAC +
Preference number: 1 (lower is better)
Translates to: FNPKHGFSDYRQCKG*MLSATWAGTSRVVH
Trigger: GTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATGTTTTGGGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
3UTR GCA 90 bp GTGGGAGAGCTGCGATCTGAACCTGGGTCTATCCAGCATTACTCATaGCCCTTCCACCTCATTCCTAAGGTCACAGAGTCACAAAAGCTC +
Preference number: 1 (lower is better)
Translates to: VGELRSEPGSIQHYS*PFHLIPKVTESQKL
Trigger: GAGCTTTTGTGACTCTGTGACCTTAGGAATGAGGTGGAAGGGGCATGAGTAATGCTGGATAGACCCAGGTTCAGATCGCAGCTCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR TCA 90 bp GCTGGCACACACTTCCAGTCGTGGAAGTGGAAGTTTTTCGCACAGTaGATGCACTCTTCTCTGCCTGGCCCTTGTTTTGCCCTTGCATTT +
Preference number: 1 (lower is better)
Translates to: AGTHFQSWKWKFFAQ*MHSSLPGPCFALAF
Trigger: AAATGCAAGGGCAAAACAAGGGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGTGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 90 bp AATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATaGCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCATTC +
Preference number: 1 (lower is better)
Translates to: NQTHLSILGRTWLPE*RTMQATGMPKRTSF
Trigger: GAATGAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR GCA 90 bp GGGCAAGGGGTTGAATGTTCATCCCAAACACACTTATTCCTTCACTaGCTCACACGCACAACTCTGGTCAATTGGTGCTTGTGGTGGCCA +
Preference number: 1 (lower is better)
Translates to: GQGVECSSQTHLFLH*LTRTTLVNWCLWWP
Trigger: TGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAGGAATAAGTGTGTTTGGGATGAACATTCAACCCCTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 90 bp CATCCCAAACACACTTATTCCTTCACTGCCTCACACGCACAACTCTaGTCAATTGGTGCTTGTGGTGGCCAGCTGTTGGGTTGTGTGACT +
Preference number: 1 (lower is better)
Translates to: HPKHTYSFTASHAQL*SIGACGGQLLGCVT
Trigger: AGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAGGAATAAGTGTGTTTGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 90 bp ACTGAACACACCCAACCAACTAGCATCCTCGTAAGAACAGGACATTaGCACATTCCAGAAGCCCTCCTCCTGTCTTCATCTAGTCACCAC +
Preference number: 1 (lower is better)
Translates to: TEHTQPTSILVRTGH*HIPEALLLSSSSHH
Trigger: GTGGTGACTAGATGAAGACAGGAGGAGGGCTTCTGGAATGTGGCAATGTCCTGTTCTTACGAGGATGCTAGTTGGTTGGGTGTGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR GCA 90 bp TGTTCGAAAATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTaGCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTA +
Preference number: 1 (lower is better)
Translates to: CSKIKHTYLFWGEPG*QNAEPCRQQECPSV
Trigger: TACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATTTTCGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR GCA 90 bp CACATTCCAGAAGCCCTCCTCCTGTCTTCATCTAGTCACCACCCTTaGCCCAAGGGTAACCATTATCCTGCCATCTTGTATAGATTTGCT +
Preference number: 1 (lower is better)
Translates to: HIPEALLLSSSSHHP*PKGNHYPAILYRFA
Trigger: AGCAAATCTATACAAGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGACAGGAGGAGGGCTTCTGGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR CCA 90 bp CAAATGTTCGAAAATCAAACACACTTATCTATTCTGGGGCGAACCTaGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAG +
Preference number: 1 (lower is better)
Translates to: QMFENQTHLSILGRT*LPECRTMQATGMPK
Trigger: CTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATTTTCGAACATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR CCA 90 bp ACCCAGAAAGTTGGCCTGAGGGGTTGGATTTGTACCAGTTTTACCTaGAAGATGCTGGAGGTCTTGTCATTTGTCCCATCAACTGGAGAA +
Preference number: 1 (lower is better)
Translates to: TQKVGLRGWICTSFT*KMLEVLSFVPSTGE
Trigger: TTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTCCAGGTAAAACTGGTACAAATCCAACCCCTCAGGCCAACTTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 90 bp AGCGCCTTTCTTTTCTGCTTTGGTCTTGAAGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAA +
Preference number: 1 (lower is better)
Translates to: SAFLFCFGLEDSVNL*SQKLLQSQSCGFPE
Trigger: TTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCAGAAAAGAAAGGCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CCA 90 bp GGTAATAAAGTCAAATGTTCGAAAATCAAACACACTTATCTATTCTaGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACAG +
Preference number: 1 (lower is better)
Translates to: GNKVKCSKIKHTYLF*GEPGCQNAEPCRQQ
Trigger: CTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATTTTCGAACATTTGACTTTATTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR GCA 90 bp TGGAACTTTTTGACAACAGTGTGTATGGTGACTGTTTGGAGAGTGTaGCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACT +
Preference number: 1 (lower is better)
Translates to: WNFLTTVCMVTVWRV*QVLQLCFQGSGSDT
Trigger: AGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACACACTGTTGTCAAAAAGTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR TCA 90 bp TTGGAATTGGACTTTCTAAGCCACTGCTGCAGTTTCAGAAGTAGCTaGCTATGTAGAAATAGATACTCCGGCCCCAGTGGTCATACATTT +
Preference number: 1 (lower is better)
Translates to: LELDFLSHCCSFRSS*LCRNRYSGPSGHTF
Trigger: AAATGTATGACCACTGGGGCCGGAGTATCTATTTCTACATAGTCAGCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTCCAATTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR TCA 90 bp GAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTaGTACTCTATAATTGCACTTTCCAGAAATGAGAGTTTAGTGACA +
Preference number: 1 (lower is better)
Translates to: ESVPSSSALFPRKWE*YSIIALSRNESLVT
Trigger: TGTCACTAAACTCTCATTTCTGGAAAGTGCAATTATAGAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR GCA 90 bp AATGAGAGTTTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTaGTTTAAATCTGTCTTCCTTTCTAGCATCAAGCACAGGATAGAT +
Preference number: 1 (lower is better)
Translates to: NESLVTNLKAGTEGM*FKSVFLSSIKHRID
Trigger: ATCTATCCTGTGCTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAAACTCTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR TCA 90 bp TGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGCACAGGATAGATTaGGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTTAGA +
Preference number: 1 (lower is better)
Translates to: CFKSVFLSSIKHRID*AIEHRLQNLNSYLR
Trigger: TCTAAGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGCTTGATGCTAGAAAGGAAGACAGATTTAAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR CCA 90 bp GTTTCATTTTGTGTGCCGTGGAAAGAAATACAGGCTCCTGTGCCATaGGATGTTAACTCTTTTATTAATTTAGGGTTAACATTGTACTTG +
Preference number: 1 (lower is better)
Translates to: VSFCVPWKEIQAPVP*DVNSFINLGLTLYL
Trigger: CAAGTACAATGTTAACCCTAAATTAATAAAAGAGTTAACATCCCATGGCACAGGAGCCTGTATTTCTTTCCACGGCACACAAAATGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR GCA 90 bp GCCTGCCCTCTGTGGGCAGCTAGGCACCCTTACCCGGCCAGGAGGCACGTGCGGATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 2 (lower is better)
Translates to: ACPLWAARHPYPARRHVRMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...CCGCACGTGCCTCCTGGCCGGGTAAGGGTGCCTAGCTGCCCACAGAGGGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAGCACGGGGAGAAGAGTaGTGTGTGATGCCAAGCGCC +
Preference number: 2 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRARGEE*CVMPSA
Trigger: GGCGCTTGGCATCACACATCACTCTTCTCCCCGTGC...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAAGGTCCCCAGCTGTGTaGAGCCCGTCTTACACCTGC +
Preference number: 2 (lower is better)
Translates to: EDGPGFASWAGEIYYTAARSPAV*SPSYTC
Trigger: GCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCT...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 2 (lower is better)
Translates to: TEHGNKESSACSKESAAGAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 2 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 2 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCCCATGTCCAAAGTGCTaGGCCTCTGGGGGCGGGAGC +
Preference number: 2 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLPCPKC*ASGGGS
Trigger: GCTCCCGCCCCCAGAGGCTCAGCACTTTGGACATGG...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR-3UTR TCA 90 bp CCCAGGACTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTCCCCTCCTGTGACCCTGTaGGGTAGGGGACATCACTGG +
Preference number: 2 (lower is better)
Translates to: PRTDPRAAVYTAKSPGLSPPVTL*GRGHHW
Trigger: CCAGTGATGTCCCCTACCTCACAGGGTCACAGGAGG...GGAGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAGTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR-3UTR GCA 90 bp GCCACATTCCAGAAGCCCTCCTCCTGTCTTCATCTAGTCACCACCCTTGCCCCACCTGCCCCCTGTCCCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: ATFQKPSSCLHLVTTLAPPAPCP*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGGACAGGGGGCAGG...TGGGGCAAGGGTGGTGACTAGATGAAGACAGGAGGAGGGCTTCTGGAATGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR TCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGCCCTTTGTCACATGTaGGGATGGCCCAGGGTTCGC +
Preference number: 2 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLALCHM*GWPRVR
Trigger: GCGAACCCTGGGCCATCCTCACATGTGACAAAGGGC...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 2 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCAGGTGGACGGATGGATaGATGGGAGTGCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASRWTDG*MGVPAL
Trigger: GAGGGCAGGCACTCCCATCCATCCATCCGTCCACCT...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCGAGCCACCACCCACCTaGCTTGGGTGCTCAGAGATG +
Preference number: 2 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASEPPPT*LGCSEM
Trigger: CATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTC...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAACCAGGGTTCGCCAGCTaGGCCGGGGAGATTTACTAC +
Preference number: 2 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKPGFAS*AGEIYY
Trigger: GTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGG...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 2 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGCACGGGGAGAAGAGTaGTGTGTGATGCCAAGCGCC +
Preference number: 2 (lower is better)
Translates to: TEHGNKESSACSKESAAGARGEE*CVMPSA
Trigger: GGCGCTTGGCATCACACATCACTCTTCTCCCCGTGC...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGGCCCTTTGTCACATGTaGGGATGGCCCAGGGTTCGC +
Preference number: 2 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSALCHM*GWPRVR
Trigger: GCGAACCCTGGGCCATCCTCACATGTGACAAAGGGC...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 2 (lower is better)
Translates to: HGNKESSACSKESAAGDRMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 2 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAG +
Preference number: 2 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKKPSPD*SVAGNE
Trigger: CTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTAGGTGGACGGATGGATaGATGGGAGTGCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSRWTDG*MGVPAL
Trigger: GAGGGCAGGCACTCCCATCCATCCATCCGTCCACCT...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGAGGTGGACGGATGGATaGATGGGAGTGCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRRWTDG*MGVPAL
Trigger: GAGGGCAGGCACTCCCATCCATCCATCCGTCCACCT...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCT +
Preference number: 2 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLTTHLA*VLRDAA
Trigger: AGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGT...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTGAGCCACCACCCACCTaGCTTGGGTGCTCAGAGATG +
Preference number: 2 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASEPPPT*LGCSEM
Trigger: CATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTC...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTATCCACCAATGGGGTGTaGGCACCTTGCTATTCTGCT +
Preference number: 2 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVSTNGV*APCYSA
Trigger: AGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGA...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
3UTR-3UTR GCA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 2 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCT +
Preference number: 2 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKGAQRC*SWGDKA
Trigger: AGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACC...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGCCCACCTGGCTTGGGTaGTCAGAGATGCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKPTWLG*SEMLLL
Trigger: CAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGG...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTCCCACCTGGCTTGGGTaGTCAGAGATGCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PQNASCCLSSEGSASGRGPTWLG*SEMLLL
Trigger: CAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGG...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCAAGGAGAGCTCGGCTTaGTCAAAGGAGAGCGCTGCG +
Preference number: 2 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLKESSA*SKESAA
Trigger: CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTT...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGAATGCACTCTTCTCTaGCTGGCCCTTGTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKECTLL*LALVLP
Trigger: GGGCAAAACAAGGGCCAGGCAGAGAAGAGTGCATTC...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTAGGTGGACGGATGGATaGATGGGAGTGCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: PQNASCCLSSEGSASGRGRWTDG*MGVPAL
Trigger: GAGGGCAGGCACTCCCATCCATCCATCCGTCCACCT...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACAGGAAGGTGGACGGATaGATGGATGGGAGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYRKVDG*MDGSAC
Trigger: GCAGGCACTCCCATCCATCCATCCGTCCACCTTCCT...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCT +
Preference number: 2 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTTTHLA*VLRDAA
Trigger: AGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGT...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCT +
Preference number: 2 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASTTHLA*VLRDAA
Trigger: AGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGT...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGCCAGGGTTCGCCAGCTaGGCCGGGGAGATTTACTAC +
Preference number: 2 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKPGFAS*AGEIYY
Trigger: GTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGG...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGAGCAGGTAGACTGCTaGCCCTTTGTCACATGTGAG +
Preference number: 2 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKEQVDC*PFVTCE
Trigger: CTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTC...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGGTTCGCACAGCCGGTTaGACTTCACCATCTCGCAGA +
Preference number: 2 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARVRTAG*TSPSRR
Trigger: TCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR CAA 90 bp CGCACAACTCTGGTCAATTGGTGCTTGTGGTGGCCAGCTGTTGGGTaGTGTGACTTGCCCTGCCTTCTGAGAGCTGCACACTGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: RTTLVNWCLWWPAVG*CDLPCLLRAAHCSP
Trigger: AGGGGAGCAGTGTGCAGCTCTCAGAAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR TCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACAGTGCGGCAGCAGAACTaGATGAAGAGCTTCCGTTCG +
Preference number: 2 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTVRQQN*MKSFRS
Trigger: CGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCAC...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAG +
Preference number: 2 (lower is better)
Translates to: TFWLATECLLLPLLRRLCKPSPD*SVAGNE
Trigger: CTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAG +
Preference number: 2 (lower is better)
Translates to: PQNASCCLSSEGSASGRGKPSPD*SVAGNE
Trigger: CTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGTGGCTGGCCACAGAATaGCTCCTGTTGCCTCTCCTC +
Preference number: 2 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKWLATE*LLLPLL
Trigger: GAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCA...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GCCACATTCCAGAAGCCCTCCTCCTGTCTTCATCTAGTCACCACCCTTGCCCCAGGAATCTCGGCTCACTaGAACCTCCGCCTCATGAGG +
Preference number: 2 (lower is better)
Translates to: ATFQKPSSCLHLVTTLAPGISAH*NLRLMR
Trigger: CCTCATGAGGCGGAGGTTGCAGTGAGCCGAGATTCC...TGGGGCAAGGGTGGTGACTAGATGAAGACAGGAGGAGGGCTTCTGGAATGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR CCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGA +
Preference number: 2 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTQSGGR*TDGWMG
Trigger: TCCCATCCATCCATCCGTCCACCTTCCTCCAGACTG...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: QTEHGNKESSACSKESAAALLHV*LVMQEV
Trigger: GACCTCCTGCATCACCAACCACACGTGCAGCAACGC...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTGGCAGCAGAACTGAATaGAGAGCTTCCGTTCGCACA +
Preference number: 2 (lower is better)
Translates to: ARLAQRRALRGIESSGLAGSRTE*RASVRT
Trigger: TGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCC...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTCAGAATGCCTCCTGTTaGCTCTCCTCAGAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: ARLAQRRALRGIESSGLAQNASC*LSSEGS
Trigger: AGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTG...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCCTTCGACACACTTTGTaGGGCAAGCCCGGCATCTCT +
Preference number: 2 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVALRHTL*GKPGIS
Trigger: AGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAG...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR GCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCT +
Preference number: 2 (lower is better)
Translates to: PQNASCCLSSEGSASGRGGAQRC*SWGDKA
Trigger: AGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACC...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACATTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAA +
Preference number: 2 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTLGAQR*CSWGDK
Trigger: TTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAA...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 2 (lower is better)
Translates to: TEHGNKESSACSKESAAGNEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCTCCTCAGAAGGCTCTaGATCAGGTCGAGGTGGTCG +
Preference number: 2 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPLLRRL*IRSRWS
Trigger: CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAG...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTCAGAATGCCTCCTGTTaGCTCTCCTCAGAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: PQNASCCLSSEGSASGRGQNASC*LSSEGS
Trigger: AGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTG...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGATGGCTGGCCACAGAATaGCTCCTGTTGCCTCTCCTC +
Preference number: 2 (lower is better)
Translates to: GSLQLTGDKANALSSNRGWLATE*LLLPLL
Trigger: GAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCA...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAATACTCCGGCCCCAGTaGTCATACATTTTATGCCCT +
Preference number: 2 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAILRPQ*SYILCP
Trigger: AGGGCATAAAATGTATGACCACTGGGGCCGGAGTAT...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCT +
Preference number: 2 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAGAQRC*SWGDKA
Trigger: AGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACC...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 2 (lower is better)
Translates to: RLAQRRALRGIESSGLALNEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTTTGTTCAGAGGAATTaGTTGGCCATCGGGGTACCT +
Preference number: 2 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLFVQRN*LAIGVP
Trigger: AGGTACCCCGATGGCCAAGCAATTCCTCTGAACAAA...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGGAGCCACCACCCACCTaGCTTGGGTGCTCAGAGATG +
Preference number: 2 (lower is better)
Translates to: KQHLGSLQLTGDKANALSEPPPT*LGCSEM
Trigger: CATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTC...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKDSVNL*SQKLLQ
Trigger: TTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATC...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGACACACTTCCAGTCGTaGAAGTGGAAGTTTTTCGCA +
Preference number: 2 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLTHFQS*KWKFFA
Trigger: TGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGT...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CAA 90 bp TTATTCCTTCACTGCCTCACACGCACAACTCTGGTCAATTGGTGCTaGTGGTGGCCAGCTGTTGGGTTGTGTGACTTGCCCTGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: LFLHCLTRTTLVNWC*WWPAVGLCDLPCLL
Trigger: CAGAAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAGGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR TCA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGATCTTATTTATAGTCTaGCCAAACCGTCCCCAGACT +
Preference number: 2 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARILFIV*PNRPQT
Trigger: AGTCTGGGGACGGTTTGGTCAGACTATAAATAAGAT...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp ATGAAGTTTCAACCAGCTCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTAAAAGCTCAGGCACGTaGCCTGTGTGCTCAAACAGA +
Preference number: 2 (lower is better)
Translates to: MKFQPAHPACTQPVSGRAKSSGT*PVCSNR
Trigger: TCTGTTTGAGCACACAGGTCACGTGCCTGAGCTTTT...AGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGAGCTGGTTGAAACTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR-3UTR GCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACCCCACCTGGCTTGGGTaGTCAGAGATGCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNPTWLG*SEMLLL
Trigger: CAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGG...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 2 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNANEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCT +
Preference number: 2 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKTTHLA*VLRDAA
Trigger: AGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGT...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACGAGCCACCACCCACCTaGCTTGGGTGCTCAGAGATG +
Preference number: 2 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNEPPPT*LGCSEM
Trigger: CATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTC...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGATACTCCGGCCCCAGTaGTCATACATTTTATGCCCT +
Preference number: 2 (lower is better)
Translates to: RLAQRRALRGIESSGLALILRPQ*SYILCP
Trigger: AGGGCATAAAATGTATGACCACTGGGGCCGGAGTAT...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACGGGGTACCTTTTGGCTaGCCACAGAATGCCTCCTGT +
Preference number: 2 (lower is better)
Translates to: HLGSLQLTGDKANALSSNGVPFG*PQNASC
Trigger: ACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCC...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACGCACTCTTCTCTGCCTaGCCCTTGTTTTGCCCTTGC +
Preference number: 2 (lower is better)
Translates to: HLGSLQLTGDKANALSSNALFSA*PLFCPC
Trigger: GCAAGGGCAAAACAAGGGCCAGGCAGAGAAGAGTGC...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR GCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGGACTTTCTAAGCCACTaGTGCAGTTTCAGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKDFLSH*CSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTTGCTGAGCCATCACACCTaGCCCGGTCACTGCAACTTT +
Preference number: 2 (lower is better)
Translates to: SSSSHHPCPKGNHYPAILLSHHT*PGHCNF
Trigger: AAAGTTGCAGTGACCGGGGCAGGTGTGATGGCTCAG...CAAGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCTTTAAACAAGGTTCATaGTTGCACGCACACGCATTC +
Preference number: 2 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLFKQGS*LHAHAF
Trigger: GAATGCGTGTGCGTGCAAGCATGAACCTTGTTTAAA...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR-3UTR GCA 90 bp ATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGACTGTTTGGAGAGTGTaGCAAGTTCTTCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: IYSGANLAARMPNHAGNRTVWRV*QVLQLC
Trigger: ACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGT...CCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR-3UTR CCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCT +
Preference number: 2 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNTTHLA*VLRDAA
Trigger: AGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGT...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACAGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTDSVNL*SQKLLQ
Trigger: TTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATC...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACGAGCAGGTAGACTGCTaGCCCTTTGTCACATGTGAG +
Preference number: 2 (lower is better)
Translates to: HLGSLQLTGDKANALSSNEQVDC*PFVTCE
Trigger: CTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTC...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CAA 90 bp GCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTaGGAATTGGACTTTCTAAGCCACTGCTGCAGTTTCAGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: AQRRALRGIESSGLA*ELDFLSHCCSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTCCAATTCCAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CAA 90 bp CTTTACATTTTGTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTaGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: LYILFRGIAWPSGYL*AGHRMPPVASPQKA
Trigger: AGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAATGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CAA 90 bp GGATTTGTACCAGTTTTACCTGGAAGATGCTGGAGGTCTTGTCATTaGTCCCATCAACTGGAGAAGGCGGCCATGGAGAGAAGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: GFVPVLPGRCWRSCH*SHQLEKAAMERRAV
Trigger: CACTGCCCTTCTCTCCATGGCCGCCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTCCAGGTAAAACTGGTACAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR TCA 90 bp ATCCTCGTAAGAACAGGACATTGCCACATTCCAGAAGCCCTCCTCCTGTCTTCATTGCCAGGCTGGTCTTaGGCTCCTGACCTAAGAAGT +
Preference number: 2 (lower is better)
Translates to: ILVRTGHCHIPEALLLSSLPGWS*APDLRS
Trigger: ACTTCTTAGGTCAGGAGCTCAAGACCAGCCTGGCAA...TGAAGACAGGAGGAGGGCTTCTGGAATGTGGCAATGTCCTGTTCTTACGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR TCA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCTCTGGGGGCGGGAGCTaGGAGATCCAGCTCTGGACT +
Preference number: 2 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFSGGGS*EIQLWT
Trigger: AGTCCAGAGCTGGATCTCTCAGCTCCCGCCCCCAGA...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR GCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCT +
Preference number: 2 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKGAQRC*SWGDKA
Trigger: AGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACC...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCCCACCTGGCTTGGGTaGTCAGAGATGCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSPTWLG*SEMLLL
Trigger: CAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGG...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCGACTTTCTAAGCCACTaGTGCAGTTTCAGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNADFLSH*CSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GGACGAGCCTCTAAGACACTAAGACATGAAGTTTCAACCAGCTCACCCGGCATGAGTAAGTGGGAGAGCTaGGATCTGAACCTGGGTCTA +
Preference number: 2 (lower is better)
Translates to: GRASKTLRHEVSTSSPGMSKWES*DLNLGL
Trigger: TAGACCCAGGTTCAGATCGCAGCTCTCCCACTTACT...CATGCCGGGTGAGCTGGTTGAAACTTCATGTCTTAGTGTCTTAGAGGCTCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR-3UTR CCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGATTCAGAGGAATTGCTTaGCCATCGGGGTACCTTTTG +
Preference number: 2 (lower is better)
Translates to: GSLQLTGDKANALSSNRGFRGIA*PSGYLL
Trigger: CAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACGTTCGCACAGCCGGTTaGACTTCACCATCTCGCAGA +
Preference number: 2 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNVRTAG*TSPSRR
Trigger: TCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp TGTCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTAACATGAGGTTCAAGTaGTTCTCGTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: CLHLVTTLAPRVTIILPSNMRFK*FSCLSL
Trigger: GAGGCTGAGGCACGAGAATCACTTGAACCTCATGTT...AGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR GCA 90 bp CAAAGGATTCCTAGCAAGTACAAGCTTCTGACTTCACAGAGAGGCCATGGTAAAAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAG +
Preference number: 2 (lower is better)
Translates to: QRIPSKYKLLTSQRGHGKKPSPD*SVAGNE
Trigger: CTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT...TTTACCATGGCCTCTCTGTGAAGTCAGAAGCTTGTACTTGCTAGGAATCCTTTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR GCA 90 bp ATCCTCGTAAGAACAGGACATTGCCACATTCCAGAAGCCCTCCTCCTGTCTTCATCTCCCCCACTGCTCTaGAGAGCAGCTCTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: ILVRTGHCHIPEALLLSSSPPLL*RAALFK
Trigger: TTTGAAAAGAGCTGCTCTGCAGAGCAGTGGGGGAGA...TGAAGACAGGAGGAGGGCTTCTGGAATGTGGCAATGTCCTGTTCTTACGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR CCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNADSVNL*SQKLLQ
Trigger: TTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATC...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp TTTTACCTGGAAGATGCTGGAGGTCTTGTCATTTGTCCCATCAACTGGAGAAGGCATCGGGGTACCTTTTaGCTGGCCACAGAATGCCTC +
Preference number: 2 (lower is better)
Translates to: FYLEDAGGLVICPINWRRHRGTF*LATECL
Trigger: GAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATG...CCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTCCAGGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGAAAGTGCTGAGCCTCTaGGGGCGGGAGCTGAGAGAT +
Preference number: 2 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEKVLSL*GRELRD
Trigger: ATCTCTCAGCTCCCGCCCCCAGAGGCTCAGCACTTT...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR CAA 90 bp CTAACGTGGTCTGAAGGGGTCTCTTTGCCCAGTGACATTCTGGGGTaGGGATCTGGGATTTCCTCCATTGCTTCCTTACATCAACATTTG +
Preference number: 2 (lower is better)
Translates to: LTWSEGVSLPSDILG*GSGISSIASLHQHL
Trigger: CAAATGTTGATGTAAGGAAGCAATGGAGGAAATCCCAGATCCCAACCCCAGAATGTCACTGGGCAAAGAGACCCCTTCAGACCACGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR GCA 90 bp TCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTTGAGGCGCTCGCCACCATaGCTGGCTGATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: SSSSHHPCPKGNHYPAILRRSPP*LADFYI
Trigger: AATATAAAAATCAGCCAGGCATGGTGGCGAGCGCCT...CAAGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR CCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTTCAGAGGAATTGCTTaGCCATCGGGGTACCTTTTG +
Preference number: 2 (lower is better)
Translates to: KQHLGSLQLTGDKANALSFRGIA*PSGYLL
Trigger: CAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp TGTCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTCTTCCCCCTGTGGCTTaGGTTTTCACTCTCTTAATG +
Preference number: 2 (lower is better)
Translates to: CLHLVTTLAPRVTIILPSLPPVA*VFTLLM
Trigger: CATTAAGAGAGTGAAAACCCAAGCCACAGGGGGAAG...AGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR TCA 90 bp ATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCAAAGCACAGGATAGATTaGGCCATCGAACACAGATTG +
Preference number: 2 (lower is better)
Translates to: IKHTYLFWGEPGCQNAEPKHRID*AIEHRL
Trigger: CAATCTGTGTTCGATGGCTCAATCTATCCTGTGCTT...TGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR-3UTR TCA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGCAACAGTGTGTATGGTaGCTGTTTGGAGAGTGTGCC +
Preference number: 2 (lower is better)
Translates to: KRTSFLKLRANLGKGFQEQQCVW*LFGECA
Trigger: GGCACACTCTCCAAACAGTCACCATACACACTGTTG...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR-3UTR GCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCT +
Preference number: 2 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYGAQRC*SWGDKA
Trigger: AGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACC...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAGACTTTCTAAGCCACTaGTGCAGTTTCAGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKDFLSH*CSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTC +
Preference number: 2 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANVPAGA*TAQAVL
Trigger: GAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAAC...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGCAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGA +
Preference number: 2 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKQSGGR*TDGWMG
Trigger: TCCCATCCATCCATCCGTCCACCTTCCTCCAGACTG...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCCAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGA +
Preference number: 2 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRAQSGGR*TDGWMG
Trigger: TCCCATCCATCCATCCGTCCACCTTCCTCCAGACTG...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAGTTTGTCGGAAGACTaGAGCCAACAAGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPSLSED*SQQAAF
Trigger: AAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACT...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGTTAACAATGCATGGCTaGCTTTACATTTTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKLTMHG*LYILFR
Trigger: TCTGAACAAAATGTAAAGCCAGCCATGCATTGTTAA...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTTTAACAATGCATGGCTaGCTTTACATTTTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: PQNASCCLSSEGSASGRGLTMHG*LYILFR
Trigger: TCTGAACAAAATGTAAAGCCAGCCATGCATTGTTAA...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp GGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATCCAGGAGGGAATGGGGAGTaGCTGCTTCATGGGTATGGG +
Preference number: 2 (lower is better)
Translates to: GQVLYYFIYMKCPGEANPGGNGE*LLHGYG
Trigger: CCCATACCCATGAAGCAGCCACTCCCCATTCCCTCC...TGGATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
3UTR-3UTR CCA 90 bp GACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGAGGGGAGGAGGGAATaGGGAGTGGCTGCTTCATGG +
Preference number: 2 (lower is better)
Translates to: DTKGQVLYYFIYMKCPGEEGRRE*GVAASW
Trigger: CCATGAAGCAGCCACTCCCCATTCCCTCCTCCCCTC...CTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
3UTR CAA 90 bp AGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTaGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGC +
Preference number: 2 (lower is better)
Translates to: SSGLPKAAKVLNVVA*VICPSAVFHRDYQS
Trigger: GCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
3UTR-3UTR TCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAATCTTATTTATAGTCTaGCCAAACCGTCCCCAGACT +
Preference number: 2 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKILFIV*PNRPQT
Trigger: AGTCTGGGGACGGTTTGGTCAGACTATAAATAAGAT...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGGTGCGGCAGCAGAACTaGATGAAGAGCTTCCGTTCG +
Preference number: 2 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGVRQQN*MKSFRS
Trigger: CGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCAC...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GGAGCCAACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTATTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAA +
Preference number: 2 (lower is better)
Translates to: GANKQHLRGYHHFRNTSLLGAQR*CSWGDK
Trigger: TTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAA...TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAACAAGGTTCATGCTTaGACGCACACGCATTCATGC +
Preference number: 2 (lower is better)
Translates to: KRTSFLKLRANLGKGFQENKVHA*THTHSC
Trigger: GCATGAATGCGTGTGCGTGCAAGCATGAACCTTGTT...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR CAA 90 bp TTGTTCCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTaGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACC +
Preference number: 2 (lower is better)
Translates to: LFLLVCRKTGANKQH*RGYHHFRNTSLRAT
Trigger: GGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATGAGAAGAGTGATGTGTaGTGCCAAGCGCCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYEKSDV*CQAPFF
Trigger: AAAGAAAGGCGCTTGGCATCACACATCACTCTTCTC...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR TCA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCGCCCTTTGTCACATGTaGGGATGGCCCAGGGTTCGC +
Preference number: 2 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSALCHM*GWPRVR
Trigger: GCGAACCCTGGGCCATCCTCACATGTGACAAAGGGC...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 2 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKNEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TGTCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTGTTTTCCAAAGTGGTTaGCAACTTAAACTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: CLHLVTTLAPRVTIILPSVFQSG*QLKLLA
Trigger: AGCAAGGAGTTTAAGTTGGCAACCACTTTGGAAAAC...AGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR GCA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACAGCCCGTCTTACACCTaGTACAGTTCCTGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYSPSYT*YSSCWS
Trigger: GCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCT...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp TTTAGAGGAATGATAAGAGCTCAGGGTATGGGGCATGCTGATGGAGAAGGAAAGTCAAACAGACCAAACTaGTGTCTTCACACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: FRGMIRAQGMGHADGEGKSNRPN*CLHTAG
Trigger: ACCTGCTGTGTGAAGACAGCAGTTTGGTCTGTTTGA...CTTTCCTTCTCCATCAGCATGCCCCATACCCTGAGCTCTTATCATTCCTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR-3UTR GCA 90 bp ATTTTTAGAGGAATGATAAGAGCTCAGGGTATGGGGCATGCTGATGGAGAAGGACATTTCGGAAGAATCTaGTGGGTGCATTCCTCATGC +
Preference number: 2 (lower is better)
Translates to: IFRGMIRAQGMGHADGEGHFGRI*WVHSSC
Trigger: GCATGAGGAATGCACCCAGCAGATTCTTCCGAAATG...TCCTTCTCCATCAGCATGCCCCATACCCTGAGCTCTTATCATTCCTCTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR-3UTR CCA 90 bp GGAGCCAACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAATACTCCGGCCCCAGTaGTCATACATTTTATGCCCT +
Preference number: 2 (lower is better)
Translates to: GANKQHLRGYHHFRNTSLILRPQ*SYILCP
Trigger: AGGGCATAAAATGTATGACCACTGGGGCCGGAGTAT...TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCCATCGGGGTACCTTTTaGCTGGCCACAGAATGCCTC +
Preference number: 2 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSHRGTF*LATECL
Trigger: GAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATG...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGAAACGAGGAGAGTTTTaGGGAAAGGCGTCACTGTCA +
Preference number: 2 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEKRGEF*GKASLS
Trigger: TGACAGTGACGCCTTTCCCCAAAACTCTCCTCGTTT...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR GCA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAAGGAGAGCTCGGCTTaGTCAAAGGAGAGCGCTGCG +
Preference number: 2 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSKESSA*SKESAA
Trigger: CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTT...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp GACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGGAATGGGGAGTGGCTaGTTCATGGGTATGGGGTTT +
Preference number: 2 (lower is better)
Translates to: DTKGQVLYYFIYMKCPGEGMGSG*FMGMGF
Trigger: AAACCCCATACCCATGAAGCAGCCACTCCCCATTCC...CTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558154.2
3UTR-3UTR GCA 90 bp GTGAAAGAAGCCAGACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAAAGTGGATTAGAGGTTaGCAGGAGCTGGGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: VKEARHKRPGVVLFHLYEKWIRG*QELGGE
Trigger: CTCCCCTCCCAGCTCCTGGCAACCTCTAATCCACTT...TTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTCTGGCTTCTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558154.2
3UTR-3UTR CCA 90 bp GGAGCCAACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGTTTGTCGGAAGACTaGAGCCAACAAGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: GANKQHLRGYHHFRNTSLSLSED*SQQAAF
Trigger: AAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACT...TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp TACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGCTCTGTATGGTGACTGTTTaGAGAGTGTGCCAAGTTCTT +
Preference number: 2 (lower is better)
Translates to: YLIPKTEGKSGKGVSRELCMVTV*RVCQVL
Trigger: AAGAACTTGGCACACTCTCCAAACAGTCACCATACA...GAGCTCTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR CAA 90 bp GGGTTAAAAATGGAACTTTTTGACAACAGTGTGTATGGTGACTGTTaGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: GLKMELFDNSVYGDC*ESVPSSSALFPRKW
Trigger: CCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACACACTGTTGTCAAAAAGTTCCATTTTTAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR TCA 90 bp TACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGCTCTGGCTAGCAATAAAATaGGAACAGTTATGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: YLIPKTEGKSGKGVSRELWLAIK*EQLCSW
Trigger: CCAAGAGCATAACTGTTCTCATTTTATTGCTAGCCA...GAGCTCTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR-3UTR TCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGCCAAGGAAGTGGGAGTaGTACTCTATAATTGCACTT +
Preference number: 2 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEPRKWE*YSIIAL
Trigger: AAGTGCAATTATAGAGTATCACTCCCACTTCCTTGG...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR GCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCTTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAA +
Preference number: 2 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSLGAQR*CSWGDK
Trigger: TTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAA...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 2 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSNEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGACTTTCTAAGCCACTaGTGCAGTTTCAGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANDFLSH*CSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp CAAGTGTCCAAATATGTGAGGGCCTCTGCTTCTGAACTAGCTGTTCTTTTCCATTACTCCCTGCTAGAATaGAGACAGAACACAGAATCA +
Preference number: 2 (lower is better)
Translates to: QVSKYVRASASELAVLFHYSLLE*RQNTES
Trigger: TGATTCTGTGTTCTGTCTGCATTCTAGCAGGGAGTA...ATGGAAAAGAACAGCTAGTTCAGAAGCAGAGGCCCTCACATATTTGGACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR GCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTACGCACACGCATTCATaGAGTCAATCAACAACTGTT +
Preference number: 2 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLTHTHS*SQSTTV
Trigger: AACAGTTGTTGATTGACTGCATGAATGCGTGTGCGT...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CCA 90 bp CACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCGGAGTGGCTGCTTCATaGGTATGGGGTTTCTTTTTG +
Preference number: 2 (lower is better)
Translates to: HKRPGVVLFHLYEMSRRGGVAAS*VWGFFL
Trigger: CAAAAAGAAACCCCATACCCATGAAGCAGCCACTCC...GCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558154.2
3UTR-3UTR CCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGTGTATGGTGACTGTTTaGAGAGTGTGCCAAGTTCTT +
Preference number: 2 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPECMVTV*RVCQVL
Trigger: AAGAACTTGGCACACTCTCCAAACAGTCACCATACA...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR TCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTATCAACAACTGTTTGTaGGCCATGTCCAAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSINNCL*AMSKVL
Trigger: CAGCACTTTGGACATGGCTCACAAACAGTTGTTGAT...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANDSVNL*SQKLLQ
Trigger: TTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATC...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKDSVNL*SQKLLQ
Trigger: TTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATC...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CAA 90 bp AACCGACTAAACAATACTGTGATTCATAAATGTGCACAGCAGCAGTaGGTTGCATTTCTCCCCGAGATAAGTGGGGATACATACTTCTTT +
Preference number: 2 (lower is better)
Translates to: NRLNNTVIHKCAQQQ*VAFLPEISGDTYFF
Trigger: AAAGAAGTATGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATTGTTTAGTCGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR TCA 90 bp GGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATCCAGTGCTGACGTTTACATaGCATCGTGGATGTACTAAA +
Preference number: 2 (lower is better)
Translates to: GQVLYYFIYMKCPGEANPVLTFT*HRGCTK
Trigger: TTTAGTACATCCACGATGTCATGTAAACGTCAGCAC...TGGATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
3UTR-3UTR TCA 90 bp GTCATCTTTTTGTTATGCTTTCTACTGGAGATACAGAACCGACTAAACAATACTCAACAGTGTGTATGGTaGCTGTTTGGAGAGTGTGCC +
Preference number: 2 (lower is better)
Translates to: VIFLLCFLLEIQNRLNNTQQCVW*LFGECA
Trigger: GGCACACTCTCCAAACAGTCACCATACACACTGTTG...AGTATTGTTTAGTCGGTTCTGTATCTCCAGTAGAAAGCATAACAAAAAGATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR TCA 90 bp GTCATCTTTTTGTTATGCTTTCTACTGGAGATACAGAACCGACTAAACAATACTACTGTCACGGCCCCGTaGAAGAGAAAAGGAGGTAAA +
Preference number: 2 (lower is better)
Translates to: VIFLLCFLLEIQNRLNNTTVTAP*KRKGGK
Trigger: TTTACCTCCTTTTCTCTTTCACGGGGCCGTGACAGT...AGTATTGTTTAGTCGGTTCTGTATCTCCAGTAGAAAGCATAACAAAAAGATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR CAA 90 bp AAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTaGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTC +
Preference number: 2 (lower is better)
Translates to: KFTWNYTGPKIAKTI*RKNHQVGGLALSYF
Trigger: GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
3UTR CAA 90 bp GTGAAAAGTGTGTTTCTAAACCAGACCATTTTGCTAAGAACTTTATaGGGACAACTGGCAGAACTAGAATTCAGTCAGAGGGTTGATGGT +
Preference number: 2 (lower is better)
Translates to: VKSVFLNQTILLRTL*GQLAELEFSQRVDG
Trigger: ACCATCAACCCTCTGACTGAATTCTAGTTCTGCCAGTTGTCCCAATAAAGTTCTTAGCAAAATGGTCTGGTTTAGAAACACACTTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR CAA 90 bp GCTTCTGAACTAGCTGTTCTTTTCCATGGGTTTAGTCAGCTATCCTaGCAGAATACAAGCTTTAGAAAAAGACTTGGTATTTGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: ASELAVLFHGFSQLS*QNTSFRKRLGICPS
Trigger: TGAGGGACAAATACCAAGTCTTTTTCTAAAGCTTGTATTCTGCAAGGATAGCTGACTAAACCCATGGAAAAGAACAGCTAGTTCAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR TCA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACATCTTATTTATAGTCTaGCCAAACCGTCCCCAGACT +
Preference number: 2 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYILFIV*PNRPQT
Trigger: AGTCTGGGGACGGTTTGGTCAGACTATAAATAAGAT...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR GCA 90 bp CAAGTGTCCAAATATGTGAGGGCCTCTGCTTCTGAACTAGCTGTTCTTTTCCATTTAGTCAGCTATCCTTaGAGAATACAAGCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: QVSKYVRASASELAVLFHLVSYP*RIQALE
Trigger: TTCTAAAGCTTGTATTCTGCAAGGATAGCTGACTAA...ATGGAAAAGAACAGCTAGTTCAGAAGCAGAGGCCCTCACATATTTGGACACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR GCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGGGTAAAGAGATTGACTaGAATATTAATGCAAATGGG +
Preference number: 2 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEGKEID*NINANG
Trigger: CCCATTTGCATTAATATTGCAGTCAATCTCTTTACC...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CCA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCTTCAGAGGAATTGCTTaGCCATCGGGGTACCTTTTG +
Preference number: 2 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSFRGIA*PSGYLL
Trigger: CAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CAA 90 bp TCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTaGTATAGATTTGCTTTATCTAGTTTTGTATTTATGCAAATGAAG +
Preference number: 2 (lower is better)
Translates to: SSHHPCPKGNHYPAI*YRFALSSFVFMQMK
Trigger: CTTCATTTGCATAAATACAAAACTAGATAAAGCAAATCTATACAAGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR CAA 90 bp TACTCTATAATTGCACTTTCCAGAAATGAGAGTTTAGTGACAAACTaGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: YSIIALSRNESLVTN*KAGTEGMCFKSVFL
Trigger: AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAAACTCTCATTTCTGGAAAGTGCAATTATAGAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR TCA 90 bp GTCATCTTTTTGTTATGCTTTCTACTGGAGATACAGAACCGACTAAACAATACTATCAACAACTGTTTGTaGGCCATGTCCAAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: VIFLLCFLLEIQNRLNNTINNCL*AMSKVL
Trigger: CAGCACTTTGGACATGGCTCACAAACAGTTGTTGAT...AGTATTGTTTAGTCGGTTCTGTATCTCCAGTAGAAAGCATAACAAAAAGATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR GCA 90 bp GTCATCTTTTTGTTATGCTTTCTACTGGAGATACAGAACCGACTAAACAATACTACTGTTTGGAGAGTGTaGCAAGTTCTTCAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: VIFLLCFLLEIQNRLNNTTVWRV*QVLQLC
Trigger: ACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGT...AGTATTGTTTAGTCGGTTCTGTATCTCCAGTAGAAAGCATAACAAAAAGATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CCA 90 bp AACCAGACCATTTTGCTAAGAACTTTATTGGGACAACTGGCAGAACTAGAATTCGCACTATTGACATTTTaGTCTGGACAGTTCTTTGTC +
Preference number: 2 (lower is better)
Translates to: NQTILLRTLLGQLAELEFALLTF*SGQFFV
Trigger: GACAAAGAACTGTCCAGACCAAAATGTCAATAGTGC...GAATTCTAGTTCTGCCAGTTGTCCCAATAAAGTTCTTAGCAAAATGGTCTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR CAA 90 bp ACATTTATTGAGGCACTCTTTAATTTCAGCAGCATCCTGCAGATTTaGTGTCAAGGCCTTGTATATCCTTTACTAGATTGTCTAGATATT +
Preference number: 2 (lower is better)
Translates to: TFIEALFNFSSILQI*CQGLVYPLLDCLDI
Trigger: AATATCTAGACAATCTAGTAAAGGATATACAAGGCCTTGACACAAAATCTGCAGGATGCTGCTGAAATTAAAGAGTGCCTCAATAAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR CAA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTGCTGCACGTGTGGTaGGTGATGCAGGAGGTCCCC +
Preference number: 3 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRLLHVW*VMQEVP
Trigger: GGGGACCTCCTGCATCACCAACCACACGTGCAGCAA...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR TCA 72 bp CAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTaGGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGA +
Preference number: 3 (lower is better)
Translates to: QRAGRLLALCHM*GWPRVRQLGRG
Trigger: TCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGCACCACCCACCTGGCTaGGGTGCTCAGAGATGCTGC +
Preference number: 3 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARHHPPG*GAQRCC
Trigger: GCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTG...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACACCACCCACCTGGCTaGGGTGCTCAGAGATGCTGC +
Preference number: 3 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAHHPPG*GAQRCC
Trigger: GCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTG...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR TCA 72 bp CCTTACCCGGCCAGGAGGCACGTGCGGCAGCAGAACTaGATGAAGAGCTTCCGTTCGCACAGCCGGTTGGAC +
Preference number: 3 (lower is better)
Translates to: PYPARRHVRQQN*MKSFRSHSRLD
Trigger: GTCCAACCGGCTGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCACGTGCCTCCTGGCCGGGTAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp AGCCACCACCCACCTGGCTTGGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCG +
Preference number: 3 (lower is better)
Translates to: SHHPPGLGAQRC*SWGDKAVRCRA
Trigger: CGCCCTGCACCTGACAGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTCACCACCCACCTGGCTaGGGTGCTCAGAGATGCTGC +
Preference number: 3 (lower is better)
Translates to: ARLAQRRALRGIESSGLAHHPPG*GAQRCC
Trigger: GCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTG...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR TCA 72 bp GGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACAGTCTGGAGGAAGGTG +
Preference number: 3 (lower is better)
Translates to: GEIKLSGAGRRS*NRLWPTVWRKV
Trigger: CACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
3UTR TCA 72 bp ACCCGGCCAGGAGGCACGTGCGGCAGCAGAACTGAATaGAGAGCTTCCGTTCGCACAGCCGGTTGGACTTCA +
Preference number: 3 (lower is better)
Translates to: TRPGGTCGSRTE*RASVRTAGWTS
Trigger: TGAAGTCCAACCGGCTGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCACGTGCCTCCTGGCCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp CCAGACTGCTCAGTGGCAGGCAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGTGAGGATGGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: PDCSVAGNEQVD*WPFVTCEDGPG
Trigger: CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCCTGCCACTGAGCAGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp AAGAGCCACCACCCACCTGGCTTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAAGCTGTCAGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: KSHHPPGLGAQR*CSWGDKAVRCR
Trigger: CCTGCACCTGACAGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp TTGTGGTGGCCAGCTGTTGGGTTGTGTGACTTGCCCTaGCTTCTGAGAGCTGCACACTGCTCCCCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: LWWPAVGLCDLP*LLRAAHCSPPL
Trigger: CAGAGGAGGGGAGCAGTGTGCAGCTCTCAGAAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 72 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATaGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGT +
Preference number: 3 (lower is better)
Translates to: YRQCKGCMLSAT*AGTSRVVHQWG
Trigger: ACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
3UTR-3UTR CAA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTCAAGGAGAGCTCGGCTaGCTCAAAGGAGAGCGCTGC +
Preference number: 3 (lower is better)
Translates to: PQNASCCLSSEGSASGRGQGELG*LKGERC
Trigger: GCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTG...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCCCATCGGGGTACCTTTaGGCTGGCCACAGAATGCCT +
Preference number: 3 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVAPSGYL*AGHRMP
Trigger: AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGG...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp GTGACAGATGGAAGGGGCCCCTACATCTGGAGAGGCTCTAGAACCTCCTCCCAGAATGTCTCGTCAGCGTaGCTGCACGTGTGGTTGGTG +
Preference number: 3 (lower is better)
Translates to: VTDGRGPYIWRGSRTSSQNVSSA*LHVWLV
Trigger: CACCAACCACACGTGCAGCAACGCTGACGAGACATT...CTGGGAGGAGGTTCTAGAGCCTCTCCAGATGTAGGGGCCCCTTCCATCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR TCA 72 bp TCATGCATCATCTCACTGACCCCTCCTGTGACCCTGTaGGGTAGGGGACATCACTGGCCTGGACGAGCCTCT +
Preference number: 3 (lower is better)
Translates to: SCIISLTPPVTL*GRGHHWPGRAS
Trigger: AGAGGCTCGTCCAGGCCAGTGATGTCCCCTACCTCACAGGGTCACAGGAGGGGTCAGTGAGATGATGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR GCA 72 bp GGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTaGCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGT +
Preference number: 3 (lower is better)
Translates to: GVPFGWPQNASC*LSSEGSASGRG
Trigger: ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp TTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATaGAGGCAACAGGAATGCCCAAGCGTACCTCATTCC +
Preference number: 3 (lower is better)
Translates to: FWGEPGCQNAEP*RQQECPSVPHS
Trigger: GGAATGAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR GCA 72 bp CTGCACACTGCTCCCCTCCTCTGCTGCAGAGCTCCCTaGAGCCATATTCTGCTGCACAAGCCTGTCCTTGTA +
Preference number: 3 (lower is better)
Translates to: LHTAPLLCCRAP*SHILLHKPVLV
Trigger: TACAAGGACAGGCTTGTGCAGCAGAATATGGCTGCAGGGAGCTCTGCAGCAGAGGAGGGGAGCAGTGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 72 bp TCGACACACTTTGTGGGGCAAGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACAGGCTGGCACACACTT +
Preference number: 3 (lower is better)
Translates to: STHFVGQARHLF*VEALTTGWHTL
Trigger: AAGTGTGTGCCAGCCTGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR TCA 72 bp CAATTGGTGCTTGTGGTGGCCAGCTGTTGGGTTGTGTaGCTTGCCCTGCCTTCTGAGAGCTGCACACTGCTC +
Preference number: 3 (lower is better)
Translates to: QLVLVVASCWVV*LALPSESCTLL
Trigger: GAGCAGTGTGCAGCTCTCAGAAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 72 bp GCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACCTTCGACA +
Preference number: 3 (lower is better)
Translates to: ARLTPATVPAGA*TAQAVLVTPST
Trigger: TGTCGAAGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 72 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTaGGCCGGGGAGATTTACTACACAGCCGCAGAAAAG +
Preference number: 3 (lower is better)
Translates to: FVTCEDGPGFAS*AGEIYYTAAEK
Trigger: CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CCA 72 bp ATCTCGCAGAATGTCTCGTCAGCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTCCCCAGCTGTGTGAAG +
Preference number: 3 (lower is better)
Translates to: ISQNVSSALLHV*LVMQEVPSCVK
Trigger: CTTCACACAGCTGGGGACCTCCTGCATCACCAACCACACGTGCAGCAACGCTGACGAGACATTCTGCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR CCA 72 bp TGCCTCACACGCACAACTCTGGTCAATTGGTGCTTGTaGTGGCCAGCTGTTGGGTTGTGTGACTTGCCCTGC +
Preference number: 3 (lower is better)
Translates to: CLTRTTLVNWCL*WPAVGLCDLPC
Trigger: GCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTCACCACCCACCTGGCTaGGGTGCTCAGAGATGCTGC +
Preference number: 3 (lower is better)
Translates to: RGYHHFRNTSLRATTHLAHHPPG*GAQRCC
Trigger: GCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTG...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR TCA 72 bp GCATGCACGCAGCCAGTAAGTGGGAGAGCTGCGATCTaGACCTGGGTCTATCCAGCATTACTCATGCCCCTT +
Preference number: 3 (lower is better)
Translates to: ACTQPVSGRAAI*TWVYPALLMPL
Trigger: AAGGGGCATGAGTAATGCTGGATAGACCCAGGTTCAGATCGCAGCTCTCCCACTTACTGGCTGCGTGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR GCA 72 bp TCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTaGGATCTGAACCTGGGTCTATCCAGCATTACTCAT +
Preference number: 3 (lower is better)
Translates to: SPGMHAASKWES*DLNLGLSSITH
Trigger: ATGAGTAATGCTGGATAGACCCAGGTTCAGATCGCAGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR CCA 72 bp CAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTaGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAA +
Preference number: 3 (lower is better)
Translates to: QRNCLAIGVPFG*PQNASCCLSSE
Trigger: TTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CCA 72 bp TGTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTaGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: CSEELLGHRGTF*LATECLLLPLL
Trigger: GAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CCA 72 bp GAAGATGCTGGAGGTCTTGTCATTTGTCCCATCAACTaGAGAAGGCGGCCATGGAGAGAAGGGCAGTGCTGC +
Preference number: 3 (lower is better)
Translates to: EDAGGLVICPIN*RRRPWREGQCC
Trigger: GCAGCACTGCCCTTCTCTCCATGGCCGCCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 72 bp CTCACACGCACAACTCTGGTCAATTGGTGCTTGTGGTaGCCAGCTGTTGGGTTGTGTGACTTGCCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LTRTTLVNWCLW*PAVGLCDLPCL
Trigger: AAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGTTTTGTTCAGAGGAATaGCTTGGCCATCGGGGTACC +
Preference number: 3 (lower is better)
Translates to: RLAQRRALRGIESSGLALFCSEE*LGHRGT
Trigger: GGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAA...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCAGTTTAGTGACAAACTaGAAAGCCGGCACAGAAGGC +
Preference number: 3 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLSLVTN*KAGTEG
Trigger: GCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAAACT...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR TCA 72 bp CTGATGACACAGGGAGAGTACCCATGTAAGGCAGGCTaGCCAAGTCCTGTCCCTGGGAAAAGAAGAGCCAAG +
Preference number: 3 (lower is better)
Translates to: LMTQGEYPCKAG*PSPVPGKRRAK
Trigger: CTTGGCTCTTCTTTTCCCAGGGACAGGACTTGGTCAGCCTGCCTTACATGGGTACTCTCCCTGTGTCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 72 bp ACACAGACAGAACACGGTAACAAGGAGAGCTCGGCTTaGTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTC +
Preference number: 3 (lower is better)
Translates to: TQTEHGNKESSA*SKESAAGDRIF
Trigger: GAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp CTTCACTGCCTCACACGCACAACTCTGGTCAATTGGTaGTTGTGGTGGCCAGCTGTTGGGTTGTGTGACTTG +
Preference number: 3 (lower is better)
Translates to: LHCLTRTTLVNW*LWWPAVGLCDL
Trigger: CAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 72 bp CGGCATCTCTTCTGGGTAGAAGCCCTCACCACAGGCTaGCACACACTTCCAGTCGTGGAAGTGGAAGTTTTT +
Preference number: 3 (lower is better)
Translates to: RHLFWVEALTTG*HTLPVVEVEVF
Trigger: AAAAACTTCCACTTCCACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGCTTCTACCCAGAAGAGATGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 72 bp CGTGGTCTGAAGGGGTCTCTTTGCCCAGTGACATTCTaGGGTTGGGATCTGGGATTTCCTCCATTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: RGLKGSLCPVTF*GWDLGFPPLLP
Trigger: AGGAAGCAATGGAGGAAATCCCAGATCCCAACCCCAGAATGTCACTGGGCAAAGAGACCCCTTCAGACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 72 bp TTCCTTCACTGCCTCACACGCACAACTCTGGTCAATTaGTGCTTGTGGTGGCCAGCTGTTGGGTTGTGTGAC +
Preference number: 3 (lower is better)
Translates to: FLHCLTRTTLVN*CLWWPAVGLCD
Trigger: GTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACACAGAATGCCTCCTGTaGCCTCTCCTCAGAAGGCTC +
Preference number: 3 (lower is better)
Translates to: HLGSLQLTGDKANALSSNTECLL*PLLRRL
Trigger: GAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGT...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp GCTCCCTGCAGCCATATTCTGCTGCACAAGCCTGTCCTTGTAGCCACAGCTGATTTTTGTTCAGAGGAATaGCTTGGCCATCGGGGTACC +
Preference number: 3 (lower is better)
Translates to: APCSHILLHKPVLVATADFCSEE*LGHRGT
Trigger: GGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAA...ATCAGCTGTGGCTACAAGGACAGGCTTGTGCAGCAGAATATGGCTGCAGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCGGCTGGCTTTACATTTaGTTCAGAGGAATTGCTTGG +
Preference number: 3 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLGWLYI*FRGIAW
Trigger: CCAAGCAATTCCTCTGAACAAAATGTAAAGCCAGCC...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp GTGACAGATGGAAGGGGCCCCTACATCTGGAGAGGCTCTAGAACCTCCTCCCAGCCCTATTCAAGGGAATaGATCAAGCAGATCTGTGCA +
Preference number: 3 (lower is better)
Translates to: VTDGRGPYIWRGSRTSSQPYSRE*IKQICA
Trigger: TGCACAGATCTGCTTGATCAATTCCCTTGAATAGGG...CTGGGAGGAGGTTCTAGAGCCTCTCCAGATGTAGGGGCCCCTTCCATCTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCTGCCTGGCCCTTGTTTaGCCCTTGCATTTTAATGCT +
Preference number: 3 (lower is better)
Translates to: TFWLATECLLLPLLRRLCCLALV*PLHFNA
Trigger: AGCATTAAAATGCAAGGGCAAAACAAGGGCCAGGCA...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTTTCTCTGCCTGGCCCTaGTTTTGCCCTTGCATTTTA +
Preference number: 3 (lower is better)
Translates to: PQNASCCLSSEGSASGRGFSAWP*FCPCIL
Trigger: TAAAATGCAAGGGCAAAACAAGGGCCAGGCAGAGAA...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACCGTTCGCACAGCCGGTaGGACTTCACCATCTCGCAG +
Preference number: 3 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNRSHSR*DFTISQ
Trigger: CTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACG...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR CCA 72 bp CACACTTATTCCTTCACTGCCTCACACGCACAACTCTaGTCAATTGGTGCTTGTGGTGGCCAGCTGTTGGGT +
Preference number: 3 (lower is better)
Translates to: HTYSFTASHAQL*SIGACGGQLLG
Trigger: ACCCAACAGCTGGCCACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAGGAATAAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCACCACCCACCTGGCTaGGGTGCTCAGAGATGCTGC +
Preference number: 3 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSHHPPG*GAQRCC
Trigger: GCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTG...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACAGCCAACAAGCAGCATTaGAGAGGATATCACCATTTT +
Preference number: 3 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTANKQH*RGYHHF
Trigger: AAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGC...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGTTTGTTCCTGTTAGTTaGTCGGAAGACTGGAGCCAA +
Preference number: 3 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKFVPVS*SEDWSQ
Trigger: TTGGCTCCAGTCTTCCGACAAACTAACAGGAACAAA...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp TTTTACCTGGAAGATGCTGGAGGTCTTGTCATTTGTCCCATCAACTGGAGAAGGCAAGGAGAGCTCGGCTaGCTCAAAGGAGAGCGCTGC +
Preference number: 3 (lower is better)
Translates to: FYLEDAGGLVICPINWRRQGELG*LKGERC
Trigger: GCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTG...CCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTCCAGGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp GCCCAAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCATGTGCACAGCAGCAGTaGGTTGCATTTCTCCCCGAG +
Preference number: 3 (lower is better)
Translates to: AQAYLIPKTEGKSGKGVSCAQQQ*VAFLPE
Trigger: CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACA...TGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR-3UTR CAA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCTTGCTGCACGTGTGGTaGGTGATGCAGGAGGTCCCC +
Preference number: 3 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSLLHVW*VMQEVP
Trigger: GGGGACCTCCTGCATCACCAACCACACGTGCAGCAA...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAGCAGGTAGACTGCTGG +
Preference number: 3 (lower is better)
Translates to: YLIYSLTKPSPD*SVAGNEQVDCW
Trigger: CCAGCAGTCTACCTGCTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp GAAGCCCTCCTCCTGTCTTCATCTAGTCACCACCCTTaGCCCAAGGGTAACCATTATCCTGCCATCTTGTAT +
Preference number: 3 (lower is better)
Translates to: EALLLSSSSHHP*PKGNHYPAILY
Trigger: ATACAAGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGACAGGAGGAGGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR GCA 72 bp ATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTaGCAGAATGCCGAACCATGCAGGCAACAGGAATGC +
Preference number: 3 (lower is better)
Translates to: IKHTYLFWGEPG*QNAEPCRQQEC
Trigger: GCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR GCA 72 bp TCCAGTCGTGGAAGTGGAAGTTTTTCGCACAGTGAATaGACTCTTCTCTGCCTGGCCCTTGTTTTGCCCTTG +
Preference number: 3 (lower is better)
Translates to: SSRGSGSFSHSE*TLLCLALVLPL
Trigger: CAAGGGCAAAACAAGGGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAAACTTCCACTTCCACGACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 72 bp CTGCGATCTGAACCTGGGTCTATCCAGCATTACTCATaGCCCTTCCACCTCATTCCTAAGGTCACAGAGTCA +
Preference number: 3 (lower is better)
Translates to: LRSEPGSIQHYS*PFHLIPKVTES
Trigger: TGACTCTGTGACCTTAGGAATGAGGTGGAAGGGGCATGAGTAATGCTGGATAGACCCAGGTTCAGATCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR CCA 72 bp CTGAAGGGGTCTCTTTGCCCAGTGACATTCTGGGGTTaGGATCTGGGATTTCCTCCATTGCTTCCTTACATC +
Preference number: 3 (lower is better)
Translates to: LKGSLCPVTFWG*DLGFPPLLPYI
Trigger: GATGTAAGGAAGCAATGGAGGAAATCCCAGATCCCAACCCCAGAATGTCACTGGGCAAAGAGACCCCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCGCCAACAAGCAGCATTaGAGAGGATATCACCATTTT +
Preference number: 3 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAANKQH*RGYHHF
Trigger: AAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGC...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTTTTGTTCAGAGGAATaGCTTGGCCATCGGGGTACC +
Preference number: 3 (lower is better)
Translates to: KQHLGSLQLTGDKANALSFCSEE*LGHRGT
Trigger: GGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAA...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCCTTGTTTTGCCCTaGCATTTTAATGCTGCAATA +
Preference number: 3 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVALVLP*HFNAAI
Trigger: TATTGCAGCATTAAAATGCAAGGGCAAAACAAGGGC...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR TCA 72 bp AACCTCCGCCTCATGAGGAATAACATGAGGTTCAAGTaGTTCTCGTGCCTCAGCCTCTCAAGTAGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: NLRLMRNNMRFK*FSCLSLSSSWD
Trigger: ATCCCAGCTACTTGAGAGGCTGAGGCACGAGAATCACTTGAACCTCATGTTATTCCTCATGAGGCGGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR CCA 72 bp GAAAATCAAACACACTTATCTATTCTGGGGCGAACCTaGCTGCCAGAATGCCGAACCATGCAGGCAACAGGA +
Preference number: 3 (lower is better)
Translates to: ENQTHLSILGRT*LPECRTMQATG
Trigger: TCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR CCA 72 bp GCCAAGAAACAGACCCAGAAAGTTGGCCTGAGGGGTTaGATTTGTACCAGTTTTACCTGGAAGATGCTGGAG +
Preference number: 3 (lower is better)
Translates to: AKKQTQKVGLRG*ICTSFTWKMLE
Trigger: CTCCAGCATCTTCCAGGTAAAACTGGTACAAATCCAACCCCTCAGGCCAACTTTCTGGGTCTGTTTCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp GCCACATTCCAGAAGCCCTCCTCCTGTCTTCATCTAGTCACCACCCTTGCCCCACGCTGTGAGAAACTTTaGCCTACTCCAAAATTATAT +
Preference number: 3 (lower is better)
Translates to: ATFQKPSSCLHLVTTLAPRCEKL*PTPKLY
Trigger: ATATAATTTTGGAGTAGGCAAAAGTTTCTCACAGCG...TGGGGCAAGGGTGGTGACTAGATGAAGACAGGAGGAGGGCTTCTGGAATGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR TCA 72 bp CCCATATGGATATTTGGTGGACCCAGCACCATTTATTaGAAAGACCATCTTCTCCCCCACTGCTCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: PIWIFGGPSTIY*KDHLLPHCSAE
Trigger: CTCTGCAGAGCAGTGGGGGAGAAGATGGTCTTTTCAATAAATGGTGCTGGGTCCACCAAATATCCATATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR TCA 72 bp CTTGCAGCCAAAGGATTCCTAGCAAGTACAAGCTTCTaGCTTCACAGAGAGGCCATGGTAAACATCCCAAGG +
Preference number: 3 (lower is better)
Translates to: LAAKGFLASTSF*LHREAMVNIPR
Trigger: CCTTGGGATGTTTACCATGGCCTCTCTGTGAAGTCAGAAGCTTGTACTTGCTAGGAATCCTTTGGCTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR GCA 72 bp TTTAACCCAAAACATGGTTTCTCTGATTATCGACAGTaGAAAGGATGCATGCTGAGCGCGACATGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: FNPKHGFSDYRQ*KGCMLSATWAG
Trigger: CCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATGTTTTGGGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
3UTR-3UTR CAA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCATTTGTTCCTGTTAGTTaGTCGGAAGACTGGAGCCAA +
Preference number: 3 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPFVPVS*SEDWSQ
Trigger: TTGGCTCCAGTCTTCCGACAAACTAACAGGAACAAA...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAGGCTGGCTTTACATTTaGTTCAGAGGAATTGCTTGG +
Preference number: 3 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPGWLYI*FRGIAW
Trigger: CCAAGCAATTCCTCTGAACAAAATGTAAAGCCAGCC...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAGTTTAGTGACAAACTaGAAAGCCGGCACAGAAGGC +
Preference number: 3 (lower is better)
Translates to: VYGDCLESVPSSSALFPRSLVTN*KAGTEG
Trigger: GCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAAACT...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CAA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTAGATTACCAAAGCTCTaGTTCAATCTGCCACCGGAA +
Preference number: 3 (lower is better)
Translates to: LPKAAKVLNVVALVICPSRLPKL*FNLPPE
Trigger: TTCCGGTGGCAGATTGAACAAGAGCTTTGGTAATCT...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
3UTR-3UTR CAA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGGTGTATGGTGACTGTTaGGAGAGTGTGCCAAGTTCT +
Preference number: 3 (lower is better)
Translates to: KRTSFLKLRANLGKGFQEVYGDC*ESVPSS
Trigger: AGAACTTGGCACACTCTCCAAACAGTCACCATACAC...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR TCA 72 bp GACTTTCTAAGCCACTGCTGCAGTTTCAGAAGTAGCTaGCTATGTAGAAATAGATACTCCGGCCCCAGTGGT +
Preference number: 3 (lower is better)
Translates to: DFLSHCCSFRSS*LCRNRYSGPSG
Trigger: ACCACTGGGGCCGGAGTATCTATTTCTACATAGTCAGCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp TTGACAACAGTGTGTATGGTGACTGTTTGGAGAGTGTaGCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGG +
Preference number: 3 (lower is better)
Translates to: LTTVCMVTVWRV*QVLQLCFQGSG
Trigger: CCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACACACTGTTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR CCA 72 bp GTCAAATGTTCGAAAATCAAACACACTTATCTATTCTaGGGCGAACCTGGCTGCCAGAATGCCGAACCATGC +
Preference number: 3 (lower is better)
Translates to: VKCSKIKHTYLF*GEPGCQNAEPC
Trigger: GCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATTTTCGAACATTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
3UTR CCA 72 bp CACTTGGTCAGCACTCATGTTTCATTTTGTGTGCCGTaGAAAGAAATACAGGCTCCTGTGCCATGGGATGTT +
Preference number: 3 (lower is better)
Translates to: HLVSTHVSFCVP*KEIQAPVPWDV
Trigger: AACATCCCATGGCACAGGAGCCTGTATTTCTTTCCACGGCACACAAAATGAAACATGAGTGCTGACCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTGCCAACAAGCAGCATTaGAGAGGATATCACCATTTT +
Preference number: 3 (lower is better)
Translates to: KLMVPEAAPKPELWIPRIANKQH*RGYHHF
Trigger: AAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGC...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTAAACAAGGTTCATGCTaGCACGCACACGCATTCATG +
Preference number: 3 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLKQGSC*HAHAFM
Trigger: CATGAATGCGTGTGCGTGCAAGCATGAACCTTGTTT...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CAA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGGTGTATGGTGACTGTTaGGAGAGTGTGCCAAGTTCT +
Preference number: 3 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEVYGDC*ESVPSS
Trigger: AGAACTTGGCACACTCTCCAAACAGTCACCATACAC...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CAA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCCGTTCGCACAGCCGGTaGGACTTCACCATCTCGCAG +
Preference number: 3 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSRSHSR*DFTISQ
Trigger: CTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACG...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
3UTR TCA 72 bp ACAGAATCAGCCTGTGAGATTCGTGTCAAAGATGCATaGCTTGACTCAAAACGTGAGGAACCCTCAGACAAG +
Preference number: 3 (lower is better)
Translates to: TESACEIRVKDA*LDSKREEPSDK
Trigger: CTTGTCTGAGGGTTCCTCACGTTTTGAGTCAAGTCATGCATCTTTGACACGAATCTCACAGGCTGATTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR GCA 72 bp GTTGAATGTTCATCCCAAACACACTTATTCCTTCACTaGCTCACACGCACAACTCTGGTCAATTGGTGCTTG +
Preference number: 3 (lower is better)
Translates to: VECSSQTHLFLH*LTRTTLVNWCL
Trigger: CAAGCACCAATTGACCAGAGTTGTGCGTGTGAGGCAGTGAAGGAATAAGTGTGTTTGGGATGAACATTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CCA 72 bp AGACAAGTGCACAGCGAAGGGCAGCCTACAAATAACTaGCCTATAGTCTTTAAAAGCTTCCACATCATGAGG +
Preference number: 3 (lower is better)
Translates to: RQVHSEGQPTNN*PIVFKSFHIMR
Trigger: CCTCATGATGTGGAAGCTTTTAAAGACTATAGGCCAGTTATTTGTAGGCTGCCCTTCGCTGTGCACTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR CAA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCTTTGTTCCTGTTAGTTaGTCGGAAGACTGGAGCCAA +
Preference number: 3 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSFVPVS*SEDWSQ
Trigger: TTGGCTCCAGTCTTCCGACAAACTAACAGGAACAAA...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp AAATGCCTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTATTTTGTTCAGAGGAATaGCTTGGCCATCGGGGTACC +
Preference number: 3 (lower is better)
Translates to: KCLHRFGRINPTVSCRLVFCSEE*LGHRGT
Trigger: GGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAA...TACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp TTAAACAAGGTTCATGCTTGCACGCACACGCATTCATaGAGTCAATCAACAACTGTTTGTGAGCCATGTCCA +
Preference number: 3 (lower is better)
Translates to: LNKVHACTHTHS*SQSTTVCEPCP
Trigger: TGGACATGGCTCACAAACAGTTGTTGATTGACTGCATGAATGCGTGTGCGTGCAAGCATGAACCTTGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CAA 90 bp TGGGCATATTATAGCCCTACATTTATTGAGGCACTCTTTAATTTCAGCAGCATCAGAGCTGGTTTTAACTaGGGGCCCTTCTGTTGCTGT +
Preference number: 3 (lower is better)
Translates to: WAYYSPTFIEALFNFSSIRAGFN*GPFCCC
Trigger: ACAGCAACAGAAGGGCCCCAAGTTAAAACCAGCTCT...GATGCTGCTGAAATTAAAGAGTGCCTCAATAAATGTAGGGCTATAATATGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR CAA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTAAACAAGGTTCATGCTaGCACGCACACGCATTCATG +
Preference number: 3 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSKQGSC*HAHAFM
Trigger: CATGAATGCGTGTGCGTGCAAGCATGAACCTTGTTT...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CAA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCAAGCACAGGATAGATaGAGCCATCGAACACAGATT +
Preference number: 3 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFQAQDR*SHRTQI
Trigger: AATCTGTGTTCGATGGCTCAATCTATCCTGTGCTTG...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR GCA 72 bp AGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTaGAGTATTTCACAGAGATTACCAAAGCTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: SSKCGGFGHLSL*SISQRLPKLLF
Trigger: GAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATTTAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
3UTR GCA 72 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTaGTTTAAATCTGTCTTCCTTTCTAGCATCAAGCAC +
Preference number: 3 (lower is better)
Translates to: LVTNLKAGTEGM*FKSVFLSSIKH
Trigger: GTGCTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CAA 90 bp GGAGCCAACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTATTCCCAGAATTCATTTaGTTCCTGTTAGTTTGTCGG +
Preference number: 3 (lower is better)
Translates to: GANKQHLRGYHHFRNTSLFPEFI*FLLVCR
Trigger: CCGACAAACTAACAGGAACAAAATGAATTCTGGGAA...TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR TCA 72 bp GTCTTTAAAAGCTTCCACATCATGAGGCAAGGAGACTaGGGAACTGTTCCAGATGGAAGAACATTAAAGAGA +
Preference number: 3 (lower is better)
Translates to: VFKSFHIMRQGD*GTVPDGRTLKR
Trigger: TCTCTTTAATGTTCTTCCATCTGGAACAGTTCCTCAGTCTCCTTGCCTCATGATGTGGAAGCTTTTAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR TCA 72 bp GCATCACTTCATAGCCCGGAAGAAAACTCTAACCAATaGTCGTTAACATCACCAATAATGGAACAGATCGTG +
Preference number: 3 (lower is better)
Translates to: ASLHSPEENSNQ*SLTSPIMEQIV
Trigger: CACGATCTGTTCCATTATTGGTGATGTTAACGATCATTGGTTAGAGTTTTCTTCCGGGCTATGAAGTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR TCA 72 bp TCTGTCTTCCTTTCTAGCATCAAGCACAGGATAGATTaGGCCATCGAACACAGATTGCAAAATCTCAACTCT +
Preference number: 3 (lower is better)
Translates to: SVFLSSIKHRID*AIEHRLQNLNS
Trigger: AGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGCTTGATGCTAGAAAGGAAGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR TCA 72 bp CCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTaGTACTCTATAATTGCACTTTCCAGAAATGAGAGT +
Preference number: 3 (lower is better)
Translates to: PSSSALFPRKWE*YSIIALSRNES
Trigger: ACTCTCATTTCTGGAAAGTGCAATTATAGAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR-3UTR CAA 90 bp AAATGCCTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAGCCAACAAGCAGCATTaGAGAGGATATCACCATTTT +
Preference number: 3 (lower is better)
Translates to: KCLHRFGRINPTVSCRLVANKQH*RGYHHF
Trigger: AAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGC...TACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR-3UTR CAA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATTTCCCAGAATTCATTTaGTTCCTGTTAGTTTGTCGG +
Preference number: 3 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANFPEFI*FLLVCR
Trigger: CCGACAAACTAACAGGAACAAAATGAATTCTGGGAA...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CCA 72 bp TGTGTGCCGTGGAAAGAAATACAGGCTCCTGTGCCATaGGATGTTAACTCTTTTATTAATTTAGGGTTAACA +
Preference number: 3 (lower is better)
Translates to: CVPWKEIQAPVP*DVNSFINLGLT
Trigger: TGTTAACCCTAAATTAATAAAAGAGTTAACATCCCATGGCACAGGAGCCTGTATTTCTTTCCACGGCACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR-3UTR CAA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCTTTGTTCCTGTTAGTTaGTCGGAAGACTGGAGCCAA +
Preference number: 3 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSFVPVS*SEDWSQ
Trigger: TTGGCTCCAGTCTTCCGACAAACTAACAGGAACAAA...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR GCA 72 bp CATTTATTGAGGCACTCTTTAATTTCAGCAGCATCCTaGAGATTTTGTGTCAAGGCCTTGTATATCCTTTAC +
Preference number: 3 (lower is better)
Translates to: HLLRHSLISAAS*RFCVKALYILY
Trigger: GTAAAGGATATACAAGGCCTTGACACAAAATCTGCAGGATGCTGCTGAAATTAAAGAGTGCCTCAATAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR-3UTR CAA 90 bp TGGGCATATTATAGCCCTACATTTATTGAGGCACTCTTTAATTTCAGCAGCATCCAACTTACTCTCAAATaGGGAGGGAATTTCTTTGTA +
Preference number: 3 (lower is better)
Translates to: WAYYSPTFIEALFNFSSIQLTLK*GGNFFV
Trigger: TACAAAGAAATTCCCTCCCAATTTGAGAGTAAGTTG...GATGCTGCTGAAATTAAAGAGTGCCTCAATAAATGTAGGGCTATAATATGCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAGCACCGCCCAGTGGTTaGTGTAGACGGGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRAPPSG*CRRGAA
Trigger: CGCCGCGCCCCGTCTACACCAACCACTGGGCGGTGC...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACAAGTTGAGGTACCCGTaGGCCGCCGCCACGCGGTCC +
Preference number: 4 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHKLRYP*AAATRS
Trigger: GGACCGCGTGGCGGCGGCGCACGGGTACCTCAACTT...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGCCCGTCCACCGTCTTaGCGTCGTCGTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGARPPS*RRRPAP
Trigger: GGGGGCCGGACGACGACGGCAAGACGGTGGACGGGC...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGCCCGTCCACCGTCTTaGCGTCGTCGTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVARPPS*RRRPAP
Trigger: GGGGGCCGGACGACGACGGCAAGACGGTGGACGGGC...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCAGCCCGTCCACCGTCTTaGCGTCGTCGTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPARPPS*RRRPAP
Trigger: GGGGGCCGGACGACGACGGCAAGACGGTGGACGGGC...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCCTCCAGCTCTGGGGCTaGGAGCTCCAGCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: LSATWAGTSRVVHQWGVSLQLWG*ELQHPR
Trigger: TCGCGGATGCTGGAGCTCTCAGCCCCAGAGCTGGAG...GCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCCTGCCCTCTGTGGGCAGCTAGGCACCCTTACCCGGCCAGGAGGCACGTGCGGGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ACPLWAARHPYPARRHVRATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...CCGCACGTGCCTCCTGGCCGGGTAAGGGTGCCTAGCTGCCCACAGAGGGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCCATGGGGGCAGAGACTaGGGTCCCAGTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LSATWAGTSRVVHQWGVSHGGRD*GPSVAI
Trigger: GATGGCCACACTGGGACCTCAGTCTCTGCCCCCATG...GCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCATGGGGGCAGAGACTaGGGTCCCAGTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHHGGRD*GPSVAI
Trigger: GATGGCCACACTGGGACCTCAGTCTCTGCCCCCATG...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: HAERDMGRDVPRSPPMGCLEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...ACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTSSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTCCAGCTCTGGGGCTaGGAGCTCCAGCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLLQLWG*ELQHPR
Trigger: TCGCGGATGCTGGAGCTCTCAGCCCCAGAGCTGGAG...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 4 (lower is better)
Translates to: AVRCRAPLLKQTLADSLEAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAAAGTTGAGGTACCCGTaGGCCGCCGCCACGCGGTCC +
Preference number: 4 (lower is better)
Translates to: QRMHAERDMGRDVPRSPPKLRYP*AAATRS
Trigger: GGACCGCGTGGCGGCGGCGCACGGGTACCTCAACTT...TGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTGCCCGTCCACCGTCTTaGCGTCGTCGTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSARPPS*RRRPAP
Trigger: GGGGGCCGGACGACGACGGCAAGACGGTGGACGGGC...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLTRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGANLAARMPNHAGNRNATRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...GGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCTRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTGGACACAGCTGCCTaGCGTTCCCCGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLLDTAA*RSPPGG
Trigger: TCCTCCTGGCGGGGAACGGCAGGCAGCTGTGTCCAG...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGGGCCCCTGGGGAAGATaGTGCCAGACTCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVGPWGR*CQTLPS
Trigger: GGAGGGCAGAGTCTGGCAGCATCTTCCCCAGGGGCC...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCATGCCCAGACGAAAATaGAGCCCAGGCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTMPRRK*SPGPAG
Trigger: GCCGGCAGGGCCTGGGCTCCATTTTCGTCTGGGCAT...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HAERDMGRDVPRSPPMGCPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...ACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCCCTCGACCACATCTGTaGCATCGCCGTCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: LSATWAGTSRVVHQWGVSPRPHL*HRRPAC
Trigger: GCATGCTGGACGGCGATGTCACAGATGTGGTCGAGG...GCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGACTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGLEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAAGGTCCCCAGCTGTGTaGAGCCCGTCTTACACCTGC +
Preference number: 4 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRRSPAV*SPSYTC
Trigger: GCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCT...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAGCCCTTTGTCACATGTaGGGATGGCCCAGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRALCHM*GWPRVR
Trigger: GCGAACCCTGGGCCATCCTCACATGTGACAAAGGGC...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPTRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGCGGCAAGACAGGCACTaGGTCGCAGCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GCMLSATWAGTSRVVHQWRQDRH*VAALLE
Trigger: CTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCG...CCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGCGGCAAGACAGGCACTaGGTCGCAGCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRRQDRH*VAALLE
Trigger: CTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCG...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGTTTGCTGGACACAGCTaGCTGCCGTTCCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLFAGHS*LPFPAR
Trigger: CCTGGCGGGGAACGGCAGGCAGCTGTGTCCAGCAAA...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTCCCTGGGGAAGATGCTaGCAGACTCTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HAERDMGRDVPRSPPMGCPWGRC*QTLPSR
Trigger: CCTGGAGGGCAGAGTCTGGCAGCATCTTCCCCAGGG...ACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGGCACCGCCCAGTGGTTaGTGTAGACGGGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRAPPSG*CRRGAA
Trigger: CGCCGCGCCCCGTCTACACCAACCACTGGGCGGTGC...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGATGCCCAGACGAAAATaGAGCCCAGGCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLMPRRK*SPGPAG
Trigger: GCCGGCAGGGCCTGGGCTCCATTTTCGTCTGGGCAT...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCT +
Preference number: 4 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRASQLC*SRSHTP
Trigger: AGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGC...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCT +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAASQLC*SRSHTP
Trigger: AGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGC...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCGCCCTCACCACAGGCTaGCACACACTTCCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTALTTG*HTLPVV
Trigger: CACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGC...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGCCCTCCCCGGCCCCTaGGGAAGATGCTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRALPGP*GRCCQT
Trigger: AGTCTGGCAGCATCTTCCCCAGGGGCCGGGGAGGGC...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTATCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVSSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAATCCGCGAGCGGGACTaGTGGGCACTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGIRERD*WALKVW
Trigger: CCACACCTTCAGTGCCCATCAGTCCCGCTCGCGGAT...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGACTCCAGCTCTGGGGCTaGGAGCTCCAGCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGLQLWG*ELQHPR
Trigger: TCGCGGATGCTGGAGCTCTCAGCCCCAGAGCTGGAG...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAACTCCAGCTCTGGGGCTaGGAGCTCCAGCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKLQLWG*ELQHPR
Trigger: TCGCGGATGCTGGAGCTCTCAGCCCCAGAGCTGGAG...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCCAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTQVPQV*WHSPHL
Trigger: CAGATGTGGGGAATGCCATCACACCTGCGGAACCTG...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 4 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCACTGTCCACAGTGGGGTaGTGCAACATGCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: QRMHAERDMGRDVPRSPPLSTVG*CNMPSP
Trigger: CGGGGAGGGCATGTTGCATCACCCCACTGTGGACAG...TGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTACTGTCCACAGTGGGGTaGTGCAACATGCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVLSTVG*CNMPSP
Trigger: CGGGGAGGGCATGTTGCATCACCCCACTGTGGACAG...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGCAAAGGATGCATGCTaGGCGCGACATGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GCMLSATWAGTSRVVHQWAKDAC*ARHGQG
Trigger: TCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGC...CCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTCCGGACCCCCCTCCTGTGACCCTGTaGGGTAGGGGACATCACTGG +
Preference number: 4 (lower is better)
Translates to: LTPGLPFTLQSHLGSPDPPPVTL*GRGHHW
Trigger: CCAGTGATGTCCCCTACCTCACAGGGTCACAGGAGG...GGGGTCCGGAGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACAAGTTGAGGTACCCGTaGGCCGCCGCCACGCGGTCC +
Preference number: 4 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYKLRYP*AAATRS
Trigger: GGACCGCGTGGCGGCGGCGCACGGGTACCTCAACTT...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCTRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: QTEHGNKESSACSKESAATRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGACTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCGCGACAGCGTCTTGCTaGTGTGTCCCCAAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTATASC*CVPKVA
Trigger: GGCTACTTTGGGGACACAGCAGCAAGACGCTGTCGC...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAACGGCAAGACAGGCACTaGGTCGCAGCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEERQDRH*VAALLE
Trigger: CTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCG...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGCTCACAGTCAGGAATaGAGCTGCCCCGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: AVRCRAPLLKQTLADSLEAHSQE*SCPVQG
Trigger: GCCTTGCACGGGGCAGCTGCATTCCTGACTGTGAGC...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCTTTGCTGGACACAGCTaGCTGCCGTTCCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVFAGHS*LPFPAR
Trigger: CCTGGCGGGGAACGGCAGGCAGCTGTGTCCAGCAAA...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCCCATCTTATCCCGCTaGTGCACGGTGTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLPILSR*CTVSAH
Trigger: GTGGGCAGACACCGTGCAGCAGCGGGATAAGATGGG...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGATGCCCAGACGAAAATaGAGCCCAGGCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKMPRRK*SPGPAG
Trigger: GCCGGCAGGGCCTGGGCTCCATTTTCGTCTGGGCAT...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATATGCCCAGACGAAAATaGAGCCCAGGCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDMPRRK*SPGPAG
Trigger: GCCGGCAGGGCCTGGGCTCCATTTTCGTCTGGGCAT...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACTGGGCACTGAAGGTGTaGTACGGGTGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHWALKV*YGCSAV
Trigger: CACAGCAGAGCACCCGTACCACACCTTCAGTGCCCA...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTCAGGAACTTCCACCTaGGAGGGTGACAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRSGTST*EGDRAA
Trigger: GGCTGCCCTGTCACCCTCCCAGGTGGAAGTTCCTGA...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGTCAGGAACTTCCACCTaGGAGGGTGACAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AVRCRAPLLKQTLADSLESGTST*EGDRAA
Trigger: GGCTGCCCTGTCACCCTCCCAGGTGGAAGTTCCTGA...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCT +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVASQLC*SRSHTP
Trigger: AGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGC...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGCACTCTTCTCTGCCTaGCCCCACGCAGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEEALFSA*PHAGSA
Trigger: TGCGGAACCTGCGTGGGGCCAGGCAGAGAAGAGTGC...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
CDS-3UTR CCA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGGCCCTCACCACAGGCTaGCACACACTTCCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRALTTG*HTLPVV
Trigger: CACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGC...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
CDS-3UTR CCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTARHLF*VEALTT
Trigger: TGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGC...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGGTGGACGGATGGATaGATGGGAGTGCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWRWTDG*MGVPAL
Trigger: GAGGGCAGGCACTCCCATCCATCCATCCGTCCACCT...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACGGGGCCAGGTCAGGGTaGTTTCTCTCTATGCCATCA +
Preference number: 4 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHGARSG*FLSMPS
Trigger: TGATGGCATAGAGAGAAATCACCCTGACCTGGCCCC...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCCTCGACCACATCTGTaGCATCGCCGTCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVPRPHL*HRRPAC
Trigger: GCATGCTGGACGGCGATGTCACAGATGTGGTCGAGG...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTACCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACATGGGGGCAGAGACTaGGGTCCCAGTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAHGGRD*GPSVAI
Trigger: GATGGCCACACTGGGACCTCAGTCTCTGCCCCCATG...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPLEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAATCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKSSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGGTDGH*RCGTGA
Trigger: AGCACCCGTACCACACCTTCAGTGCCCATCAGTCCC...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACACTCCAGCTCTGGGGCTaGGAGCTCCAGCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTLQLWG*ELQHPR
Trigger: TCGCGGATGCTGGAGCTCTCAGCCCCAGAGCTGGAG...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGCTCCAGCTCTGGGGCTaGGAGCTCCAGCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSLQLWG*ELQHPR
Trigger: TCGCGGATGCTGGAGCTCTCAGCCCCAGAGCTGGAG...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGCAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWQVPQV*WHSPHL
Trigger: CAGATGTGGGGAATGCCATCACACCTGCGGAACCTG...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAAGGTCCCCAGCTGTGTaGAGCCCGTCTTACACCTGC +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGRSPAV*SPSYTC
Trigger: GCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCT...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAAGGTCCCCAGCTGTGTaGAGCCCGTCTTACACCTGC +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGRSPAV*SPSYTC
Trigger: GCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCT...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGGCCGCCCAGCACTTaGACCGCCCAGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGGPPST*TAQWLV
Trigger: CACCAACCACTGGGCGGTGCAAGTGCTGGGCGGCCC...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGGGGCCGCCCAGCACTTaGACCGCCCAGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKGPPST*TAQWLV
Trigger: CACCAACCACTGGGCGGTGCAAGTGCTGGGCGGCCC...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGAAGTTGAGGTACCCGTaGGCCGCCGCCACGCGGTCC +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALKLRYP*AAATRS
Trigger: GGACCGCGTGGCGGCGGCGCACGGGTACCTCAACTT...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGTTGCAAGTTGAGGTACCCGTaGGCCGCCGCCACGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VRTAGWTSPSRRMSRQRCKLRYP*AAATRS
Trigger: GGACCGCGTGGCGGCGGCGCACGGGTACCTCAACTT...GCAACGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677528.1
CDS-3UTR GCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCGCCCCTCTTCCACGCTaGCTGGACATTCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTAPLPR*LDIHFR
Trigger: TCGGAAATGAATGTCCAGGCAGCGTGGAAGAGGGGC...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCATCGCCGTCCAGCATaGGGATGCCTCCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHHRRPA*GCLLFW
Trigger: CCAAAATAGGAGGCATCCGCATGCTGGACGGCGATG...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGATGGAGCCCAGGCCCTaGCGGCCCTTTTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLMEPRP*RPFLMP
Trigger: TGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCAT...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGCCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGCCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: GCMLSATWAGTSRVVHQWPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...CCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTCCGGCGACAGCGTCTTaGTGCTGTGTCCCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: HAERDMGRDVPRSPPMGCPATAS*CCVPKV
Trigger: TACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGG...ACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCACCGGCGACAGCGTCTTaGTGCTGTGTCCCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAPATAS*CCVPKV
Trigger: TACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGG...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEETASQL*WSRSHT
Trigger: GGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGT...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGCGGCAAGACAGGCACTaGGTCGCAGCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARRQDRH*VAALLE
Trigger: CTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCG...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCCGGCAAGACAGGCACTaGGTCGCAGCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCRQDRH*VAALLE
Trigger: CTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCG...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCAGCTCACAGTCAGGAATaGAGCTGCCCCGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPAHSQE*SCPVQG
Trigger: GCCTTGCACGGGGCAGCTGCATTCCTGACTGTGAGC...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGCTCACAGTCAGGAATaGAGCTGCCCCGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGAHSQE*SCPVQG
Trigger: GCCTTGCACGGGGCAGCTGCATTCCTGACTGTGAGC...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAG +
Preference number: 4 (lower is better)
Translates to: AVRCRAPLLKQTLADSLEKPSPD*SVAGNE
Trigger: CTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCACTCCTCAGAAGGCTCTaGATCAGGTCGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAALLRRL*IRSRWS
Trigger: CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAG...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGGGCCCCTGGGGAAGATaGTGCCAGACTCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPGPWGR*CQTLPS
Trigger: GGAGGGCAGAGTCTGGCAGCATCTTCCCCAGGGGCC...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCCCATCTTATCCCGCTaGTGCACGGTGTCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVPILSR*CTVSAH
Trigger: GTGGGCAGACACCGTGCAGCAGCGGGATAAGATGGG...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCCGACAGTGCAAAGGATaGATGCTGAGCGCGACATGG +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTRQCKG*MLSATW
Trigger: CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAGCTCCCCTCCTCTGCTaGAGAGCTCCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAAPLLC*RAPCSH
Trigger: ATGGCTGCAGGGAGCTCTGCAGCAGAGGAGGGGAGC...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp TTCCCAGGACTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTACTCCTGGAGAAGCCTaGCTCGCGCCCAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FPGLTPGLPFTLQSHLGSTPGEA*LAPRQG
Trigger: TCCCTGCCTGGGCGCGAGGCAGGCTTCTCCAGGAGT...AGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAGTCCTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCCTCTTCCACGCTGCCTaGACATTCATTTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTLFHAA*TFISDR
Trigger: CCGGTCGGAAATGAATGTCCAGGCAGCGTGGAAGAG...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCGTCCGGCCCCCAGCTaGCACTGTAAATGTCGATGT +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLRPAPS*HCKCRC
Trigger: ACATCGACATTTACAGTGCCAGCTGGGGGCCGGACG...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCATCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKASLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFSLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATCTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDLRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCATGGGCACTGAAGGTGTaGTACGGGTGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAWALKV*YGCSAV
Trigger: CACAGCAGAGCACCCGTACCACACCTTCAGTGCCCA...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTATCAGGAACTTCCACCTaGGAGGGTGACAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVSGTST*EGDRAA
Trigger: GGCTGCCCTGTCACCCTCCCAGGTGGAAGTTCCTGA...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGCTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: GCMLSATWAGTSRVVHQWLPRLK*TQFKHW
Trigger: CCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAG...CCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGCTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWLPRLK*TQFKHW
Trigger: CCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAG...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGTCTCACACCCCTTGTaGCACCGGCGACAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEEVSHPL*HRRQRL
Trigger: AAGACGCTGTCGCCGGTGCCACAAGGGGTGTGAGAC...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCGCACTCTTCTCTGCCTaGCCCCACGCAGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCALFSA*PHAGSA
Trigger: TGCGGAACCTGCGTGGGGCCAGGCAGAGAAGAGTGC...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGAGCCACCACCCACCTaGCTTGGGTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGEPPPT*LGCSEM
Trigger: CATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTC...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCGCCCTCCCCGGCCCCTaGGGAAGATGCTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPIALPGP*GRCCQT
Trigger: AGTCTGGCAGCATCTTCCCCAGGGGCCGGGGAGGGC...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGGCTCCTGTCCACAGTaGGGTGATGCAACATGCCCT +
Preference number: 4 (lower is better)
Translates to: HAERDMGRDVPRSPPMGCGSCPQ*GDATCP
Trigger: AGGGCATGTTGCATCACCCCACTGTGGACAGGAGCC...ACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGGGCTCCTGTCCACAGTaGGGTGATGCAACATGCCCT +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVGSCPQ*GDATCP
Trigger: AGGGCATGTTGCATCACCCCACTGTGGACAGGAGCC...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCATGCTGAGCGCGACATaGGCAGGGACGTCCCGCGTA +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCMLSAT*AGTSRV
Trigger: TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVTKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GCMLSATWAGTSRVVHQWTKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...CCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGGGCCAGGTCAGGGTaGTTTCTCTCTATGCCATCA +
Preference number: 4 (lower is better)
Translates to: GCMLSATWAGTSRVVHQWGARSG*FLSMPS
Trigger: TGATGGCATAGAGAGAAATCACCCTGACCTGGCCCC...CCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGCCTCGACCACATCTGTaGCATCGCCGTCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARPRPHL*HRRPAC
Trigger: GCATGCTGGACGGCGATGTCACAGATGTGGTCGAGG...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGACCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGCATGGGGGCAGAGACTaGGGTCCCAGTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRHGGRD*GPSVAI
Trigger: GATGGCCACACTGGGACCTCAGTCTCTGCCCCCATG...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACATCCGCGAGCGGGACTaGTGGGCACTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYIRERD*WALKVW
Trigger: CCACACCTTCAGTGCCCATCAGTCCCGCTCGCGGAT...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCCGCGAGCGGGACTaGTGGGCACTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPIRERD*WALKVW
Trigger: CCACACCTTCAGTGCCCATCAGTCCCGCTCGCGGAT...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGATCCGCGAGCGGGACTaGTGGGCACTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLIRERD*WALKVW
Trigger: CCACACCTTCAGTGCCCATCAGTCCCGCTCGCGGAT...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTCTCCAGCTCTGGGGCTaGGAGCTCCAGCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGLQLWG*ELQHPR
Trigger: TCGCGGATGCTGGAGCTCTCAGCCCCAGAGCTGGAG...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGACAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGQVPQV*WHSPHL
Trigger: CAGATGTGGGGAATGCCATCACACCTGCGGAACCTG...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAAGGTCCCCAGCTGTGTaGAGCCCGTCTTACACCTGC +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKARSPAV*SPSYTC
Trigger: GCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCT...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGTGCGGCAGCAGAACTaGATGAAGAGCTTCCGTTCG +
Preference number: 4 (lower is better)
Translates to: AVRCRAPLLKQTLADSLEVRQQN*MKSFRS
Trigger: CGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCAC...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGGCCCCTCTTCCACGCTaGCTGGACATTCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWAPLPR*LDIHFR
Trigger: TCGGAAATGAATGTCCAGGCAGCGTGGAAGAGGGGC...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCACATCGCCGTCCAGCATaGGGATGCCTCCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAHRRPA*GCLLFW
Trigger: CCAAAATAGGAGGCATCCGCATGCTGGACGGCGATG...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGGATGCCCAGCGACTTTaGCTCGACCACATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRDAQRL*LDHICD
Trigger: GTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATC...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGCCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARPYSKA*LASRPG
Trigger: GCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGG...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTACCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLPYSKA*LASRPG
Trigger: GCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGG...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCCCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCPYSKA*LASRPG
Trigger: GCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGG...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVVQALV*IGAITA
Trigger: GGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAAC...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKTASQL*WSRSHT
Trigger: GGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGT...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCGCTCACAGTCAGGAATaGAGCTGCCCCGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCAHSQE*SCPVQG
Trigger: GCCTTGCACGGGGCAGCTGCATTCCTGACTGTGAGC...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAGCTCACAGTCAGGAATaGAGCTGCCCCGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGAHSQE*SCPVQG
Trigger: GCCTTGCACGGGGCAGCTGCATTCCTGACTGTGAGC...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAGCTCACAGTCAGGAATaGAGCTGCCCCGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAAHSQE*SCPVQG
Trigger: GCCTTGCACGGGGCAGCTGCATTCCTGACTGTGAGC...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGAATGCACTCTTCTCTaGCTGGCCCCACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDECTLL*LAPRRF
Trigger: GAACCTGCGTGGGGCCAGGCAGAGAAGAGTGCATTC...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
CDS-3UTR GCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCAGAATGCACTCTTCTCTaGCTGGCCCCACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPECTLL*LAPRRF
Trigger: GAACCTGCGTGGGGCCAGGCAGAGAAGAGTGCATTC...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWVPAGA*TAQAVL
Trigger: GAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAAC...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGCCCACCTGGCTTGGGTaGTCAGAGATGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLPTWLG*SEMLLL
Trigger: CAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGG...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACCCACCTGGCTTGGGTaGTCAGAGATGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAPTWLG*SEMLLL
Trigger: CAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGG...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAAAGGAGAGCTCGGCTTaGTCAAAGGAGAGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGKESSA*SKESAA
Trigger: CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTT...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGATGGCTGGCCACAGAATaGCTCCTGTTGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGWLATE*LLLPLL
Trigger: GAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCA...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCCCCTGGGGAAGATGCTaGCAGACTCTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPPWGRC*QTLPSR
Trigger: CCTGGAGGGCAGAGTCTGGCAGCATCTTCCCCAGGG...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCCTGCTGCACGGTGTCTaGCCACAGCAGGGACCCAAC +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPLLHGV*PQQGPN
Trigger: GTTGGGTCCCTGCTGTGGGCAGACACCGTGCAGCAG...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCATCTTATCCCGCTGCTaGACGGTGTCTGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVILSRC*TVSAHS
Trigger: GCTGTGGGCAGACACCGTGCAGCAGCGGGATAAGAT...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTACTGCTCCCCTCCTCTaGTGCAGAGCTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ARLAQRRALRGIESSGLATAPLL*CRAPCS
Trigger: GCTGCAGGGAGCTCTGCAGCAGAGGAGGGGAGCAGT...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp GTGACAGATGGAAGGGGCCCCTACATCTGGAGAGGCTCTAGAACCTCCTCCCAGTCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: VTDGRGPYIWRGSRTSSQSLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...CTGGGAGGAGGTTCTAGAGCCTCTCCAGATGTAGGGGCCCCTTCCATCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: ARLAQRRALRGIESSGLASLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAATGGGCACTGAAGGTGTaGTACGGGTGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEEWALKV*YGCSAV
Trigger: CACAGCAGAGCACCCGTACCACACCTTCAGTGCCCA...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTTQFKH*SALGPS
Trigger: TGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGT...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHTQFKH*SALGPS
Trigger: TGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGT...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGLPRLK*TQFKHW
Trigger: CCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAG...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCT +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRASQLC*SRSHTP
Trigger: AGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGC...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCT +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLASQLC*SRSHTP
Trigger: AGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGC...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGGCCCTCACCACAGGCTaGCACACACTTCCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGALTTG*HTLPVV
Trigger: CACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGC...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTAGCCCTCACCACAGGCTaGCACACACTTCCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLALTTG*HTLPVV
Trigger: CACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGC...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGCCCTCACCACAGGCTaGCACACACTTCCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLALTTG*HTLPVV
Trigger: CACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGC...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
CDS-3UTR CCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGCTTCGACACACTTTGTaGGGCAAGCCCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVLRHTL*GKPGIS
Trigger: AGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAG...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGGTTCGCACAGCCGGTTaGACTTCACCATCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWVRTAG*TSPSRR
Trigger: TCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGAGCCACCACCCACCTaGCTTGGGTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKEPPPT*LGCSEM
Trigger: CATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTC...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAGAGCCACCACCCACCTaGCTTGGGTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAEPPPT*LGCSEM
Trigger: CATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTC...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGGAGCCACCACCCACCTaGCTTGGGTGCTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: RVRQLGRGDLLHSRRKAREPPPT*LGCSEM
Trigger: CATCTCTGAGCACCCAAGCCAGGTGGGTGGTGGCTC...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATGCTGAGCGCGACATaGGCAGGGACGTCCCGCGTA +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPMLSAT*AGTSRV
Trigger: TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGCAGCTCGGATTTGCTaGTATCTGGGCTCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAAARIC*YLGSRV
Trigger: GACCCTAGAGCCCAGATACCAGCAAATCCGAGCTGC...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp TTCCCAGGACTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTATGGCCTGTGACTCCTaGAGAAGCCTGCCTCGCGCC +
Preference number: 4 (lower is better)
Translates to: FPGLTPGLPFTLQSHLGSMACDS*RSLPRA
Trigger: GGCGCGAGGCAGGCTTCTCCAGGAGTCACAGGCCAT...AGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAGTCCTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR TCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGCCTCGACCACATCTGTaGCATCGCCGTCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSPRPHL*HRRPAC
Trigger: GCATGCTGGACGGCGATGTCACAGATGTGGTCGAGG...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACGATGTAGTTGGGTCTaGTGCCCAGCGACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPRCSWV*CPATLP
Trigger: AGGCAAAGTCGCTGGGCATCAGACCCAACTACATCG...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVASSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAQVPQV*WHSPHL
Trigger: CAGATGTGGGGAATGCCATCACACCTGCGGAACCTG...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACAAGGTCCCCAGCTGTGTaGAGCCCGTCTTACACCTGC +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTRSPAV*SPSYTC
Trigger: GCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCT...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGAGGTCCCCAGCTGTGTaGAGCCCGTCTTACACCTGC +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSRSPAV*SPSYTC
Trigger: GCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCT...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGGCCCTTTGTCACATGTaGGGATGGCCCAGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRALCHM*GWPRVR
Trigger: GCGAACCCTGGGCCATCCTCACATGTGACAAAGGGC...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATCCATGTAAGGCAGGCTaGCCAAGTCCTGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDPCKAG*PSPVPG
Trigger: CCCAGGGACAGGACTTGGTCAGCCTGCCTTACATGG...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp GGACGAGCCTCTAAGACACTAAGACATGAAGTTTCAACCAGCTCACCCGGCATGGCTGCCCGGCAGCGGTaGCACCCCAGAGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: GRASKTLRHEVSTSSPGMAARQR*HPRGTG
Trigger: GCCTGTTCCTCTGGGGTGTCACCGCTGCCGGGCAGC...CATGCCGGGTGAGCTGGTTGAAACTTCATGTCTTAGTGTCTTAGAGGCTCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR TCA 90 bp CTGCCGTTTACACTGCAAAGTCACCTGGGCTCTCCGGACCCCACTGCCTCCACTGGGAGAGCTGCGATCTaGACCTGGGTCTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPFTLQSHLGSPDPTASTGRAAI*TWVYPA
Trigger: TGCTGGATAGACCCAGGTTCAGATCGCAGCTCTCCC...AGTGGAGGCAGTGGGGTCCGGAGAGCCCAGGTGACTTTGCAGTGTAAACGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGCCCCTCTTCCACGCTaGCTGGACATTCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKAPLPR*LDIHFR
Trigger: TCGGAAATGAATGTCCAGGCAGCGTGGAAGAGGGGC...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGCCCCTCTTCCACGCTaGCTGGACATTCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGAPLPR*LDIHFR
Trigger: TCGGAAATGAATGTCCAGGCAGCGTGGAAGAGGGGC...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCAGCCCCTCTTCCACGCTaGCTGGACATTCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPAPLPR*LDIHFR
Trigger: TCGGAAATGAATGTCCAGGCAGCGTGGAAGAGGGGC...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCCGTCCAGCATGCGGATaGCTCCTATTTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTRPACG*LLFWHC
Trigger: ACAATGCCAAAATAGGAGGCATCCGCATGCTGGACG...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTACATCGCCGTCCAGCATaGGGATGCCTCCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVHRRPA*GCLLFW
Trigger: CCAAAATAGGAGGCATCCGCATGCTGGACGGCGATG...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGATGCCCAGCGACTTTaGCTCGACCACATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKDAQRL*LDHICD
Trigger: GTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATC...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGCCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TEHGNKESSACSKESAAGPYSKA*LASRPG
Trigger: GCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGG...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGATGGAGCCCAGGCCCTaGCGGCCCTTTTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLMEPRP*RPFLMP
Trigger: TGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCAT...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAACCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCCCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTACTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCATCTTTCAACTTCCCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAASFNFP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGA...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVVQALV*IGAITA
Trigger: GGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAAC...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEEVQALV*IGAITA
Trigger: GGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAAC...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGVQALV*IGAITA
Trigger: GGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAAC...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAGCGACAGCGTCTTGCTaGTGTGTCCCCAAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGATASC*CVPKVA
Trigger: GGCTACTTTGGGGACACAGCAGCAAGACGCTGTCGC...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCGCGACAGCGTCTTGCTaGTGTGTCCCCAAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFATASC*CVPKVA
Trigger: GGCTACTTTGGGGACACAGCAGCAAGACGCTGTCGC...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCCCGGCGACAGCGTCTTaGTGCTGTGTCCCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCPATAS*CCVPKV
Trigger: TACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGG...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: TEHGNKESSACSKESAAGTASQL*WSRSHT
Trigger: GGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGT...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: QEVPSCVKPVLHLLQFLLTASQL*WSRSHT
Trigger: GGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGT...CAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGGAATGCACTCTTCTCTaGCTGGCCCCACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGECTLL*LAPRRF
Trigger: GAACCTGCGTGGGGCCAGGCAGAGAAGAGTGCATTC...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
CDS-3UTR GCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTTTCGCACAGTGAATaGACTCTTCTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTFSHSE*TLLCLA
Trigger: GGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAA...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAAGCCCGTCTTACACCTaGTACAGTTCCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGSPSYT*YSSCWS
Trigger: GCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCT...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACACCCACCTGGCTTGGGTaGTCAGAGATGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTPTWLG*SEMLLL
Trigger: CAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGG...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAG +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAKPSPD*SVAGNE
Trigger: CTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAG +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLKPSPD*SVAGNE
Trigger: CTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAAAGGAGAGCTCGGCTTaGTCAAAGGAGAGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAKESSA*SKESAA
Trigger: CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTT...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGCTGGCCACAGAATaGCTCCTGTTGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASWLATE*LLLPLL
Trigger: GAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCA...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCCTGCTGCACGGTGTCTaGCCACAGCAGGGACCCAAC +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPILLHGV*PQQGPN
Trigger: GTTGGGTCCCTGCTGTGGGCAGACACCGTGCAGCAG...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCATCTTATCCCGCTGCTaGACGGTGTCTGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRILSRC*TVSAHS
Trigger: GCTGTGGGCAGACACCGTGCAGCAGCGGGATAAGAT...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCGACAGTGCAAAGGATaGATGCTGAGCGCGACATGG +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVRQCKG*MLSATW
Trigger: CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTGACAGATGGAAGGGGCCCCTACATCTGGAGAGGCTCTAGAACCTCCTCCCAGCTGAGAGCTGCACACTaGTCCCCTCCTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VTDGRGPYIWRGSRTSSQLRAAH*SPPLLQ
Trigger: CTGCAGCAGAGGAGGGGAGCAGTGTGCAGCTCTCAG...CTGGGAGGAGGTTCTAGAGCCTCTCCAGATGTAGGGGCCCCTTCCATCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGTCCAGGTTTCCAATCTaGCCCAAGTTGAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVSRFPI*PKLRYP
Trigger: CGGGTACCTCAACTTGGGCCAGATTGGAAACCTGGA...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp CAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCACTCTTCCACGCTGCCTaGACATTCATTTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: QRMHAERDMGRDVPRSPPLFHAA*TFISDR
Trigger: CCGGTCGGAAATGAATGTCCAGGCAGCGTGGAAGAG...TGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCCGTCCGGCCCCCAGCTaGCACTGTAAATGTCGATGT +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFRPAPS*HCKCRC
Trigger: ACATCGACATTTACAGTGCCAGCTGGGGGCCGGACG...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGATGCCCAGACGAAAATaGAGCCCAGGCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALMPRRK*SPGPAG
Trigger: GCCGGCAGGGCCTGGGCTCCATTTTCGTCTGGGCAT...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTTCAGGAACTTCCACCTaGGAGGGTGACAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSSGTST*EGDRAA
Trigger: GGCTGCCCTGTCACCCTCCCAGGTGGAAGTTCCTGA...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCTCAGGAACTTCCACCTaGGAGGGTGACAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPSGTST*EGDRAA
Trigger: GGCTGCCCTGTCACCCTCCCAGGTGGAAGTTCCTGA...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGTCAGGAACTTCCACCTaGGAGGGTGACAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLSGTST*EGDRAA
Trigger: GGCTGCCCTGTCACCCTCCCAGGTGGAAGTTCCTGA...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATCACCACACTCCGGATaGCACACACTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRSPHSG*HTLVCK
Trigger: TTTACAGACCAGTGTGTGCCATCCGGAGTGTGGTGA...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000677364.1
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAACTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKLPRLK*TQFKHW
Trigger: CCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAG...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCGTCTCACACCCCTTGTaGCACCGGCGACAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPVSHPL*HRRQRL
Trigger: AAGACGCTGTCGCCGGTGCCACAAGGGGTGTGAGAC...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCT +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCASQLC*SRSHTP
Trigger: AGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGC...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGCACTCTTCTCTGCCTaGCCCCACGCAGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGALFSA*PHAGSA
Trigger: TGCGGAACCTGCGTGGGGCCAGGCAGAGAAGAGTGC...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
CDS-3UTR CCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCGCACTCTTCTCTGCCTaGCCCCACGCAGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVAALFSA*PHAGSA
Trigger: TGCGGAACCTGCGTGGGGCCAGGCAGAGAAGAGTGC...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
CDS-3UTR CCA 90 bp GATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCGCACTCTTCTCTGCCTaGCCCCACGCAGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: DYRQCKGCMLSATWAGTSALFSA*PHAGSA
Trigger: TGCGGAACCTGCGTGGGGCCAGGCAGAGAAGAGTGC...GGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGCCCTCACCACAGGCTaGCACACACTTCCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: TEHGNKESSACSKESAAGALTTG*HTLPVV
Trigger: CACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGC...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACTTCGACACACTTTGTaGGGCAAGCCCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGLRHTL*GKPGIS
Trigger: AGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAG...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
CDS-3UTR CCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAGCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAALLHV*LVMQEV
Trigger: GACCTCCTGCATCACCAACCACACGTGCAGCAACGC...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGAGGAAGGTGGACGGATaGATGGATGGGAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLRKVDG*MDGSAC
Trigger: GCAGGCACTCCCATCCATCCATCCGTCCACCTTCCT...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAAGGAAGGTGGACGGATaGATGGATGGGAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGRKVDG*MDGSAC
Trigger: GCAGGCACTCCCATCCATCCATCCGTCCACCTTCCT...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGTTHLA*VLRDAA
Trigger: AGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGT...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCCCAGGGTTCGCCAGCTaGGCCGGGGAGATTTACTAC +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLPGFAS*AGEIYY
Trigger: GTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGG...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATCATCGGGGTACCTTTTaGCTGGCCACAGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDHRGTF*LATECL
Trigger: GAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATG...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACAGCAGCTCTGTAAATaGGCTCCTGTCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPQQLCK*APVHSG
Trigger: CCCACTGTGGACAGGAGCCCATTTACAGAGCTGCTG...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATCAAGGTCGGTCTCATaGGCGGGGCAAGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGSRSVS*AGQGVE
Trigger: TTCAACCCCTTGCCCCGCCCATGAGACCGACCTTGA...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGCACTCTTCTCTGCCTaGCCCTTGTTTTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGALFSA*PLFCPC
Trigger: GCAAGGGCAAAACAAGGGCCAGGCAGAGAAGAGTGC...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CAA 72 bp TGGTGCTTGTGGTGGCCAGCTGTTGGGTTGTGTGACTaGCCCTGCCTTCTGAGAGCTGCACACTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: WCLWWPAVGLCD*PCLLRAAHCSP
Trigger: AGGGGAGCAGTGTGCAGCTCTCAGAAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp ATCTGCTGGGTGCATTCCTCATGCATCATCTCACTGACCCCTCCTGTGACCCTGCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: ICWVHSSCIISLTPPVTLPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...CAGGGTCACAGGAGGGGTCAGTGAGATGATGCATGAGGAATGCACCCAGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR TCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAGGGGCCAGGTCAGGGTaGTTTCTCTCTATGCCATCA +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGGARSG*FLSMPS
Trigger: TGATGGCATAGAGAGAAATCACCCTGACCTGGCCCC...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGGTAGGAATTGTTTGCTaGAGCAGCAACTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVVGIVC*SSNFSR
Trigger: GCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTAC...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCCCTCGACCACATCTGTaGCATCGCCGTCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVAPRPHL*HRRPAC
Trigger: GCATGCTGGACGGCGATGTCACAGATGTGGTCGAGG...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTCCTCGACCACATCTGTaGCATCGCCGTCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGPRPHL*HRRPAC
Trigger: GCATGCTGGACGGCGATGTCACAGATGTGGTCGAGG...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCCCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCCATGGGGGCAGAGACTaGGGTCCCAGTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAHGGRD*GPSVAI
Trigger: GATGGCCACACTGGGACCTCAGTCTCTGCCCCCATG...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGGTDGH*RCGTGA
Trigger: AGCACCCGTACCACACCTTCAGTGCCCATCAGTCCC...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKGTDGH*RCGTGA
Trigger: AGCACCCGTACCACACCTTCAGTGCCCATCAGTCCC...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGCAGCAGAACTGAATaGAGAGCTTCCGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDGSRTE*RASVRT
Trigger: TGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCC...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGGTGCGGCAGCAGAACTaGATGAAGAGCTTCCGTTCG +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGVRQQN*MKSFRS
Trigger: CGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCAC...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGCACGGGGAGAAGAGTaGTGTGTGATGCCAAGCGCC +
Preference number: 4 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHARGEE*CVMPSA
Trigger: GGCGCTTGGCATCACACATCACTCTTCTCCCCGTGC...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCGCACGGGGAGAAGAGTaGTGTGTGATGCCAAGCGCC +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCARGEE*CVMPSA
Trigger: GGCGCTTGGCATCACACATCACTCTTCTCCCCGTGC...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGTTGCGCCCTTTGTCACATGTaGGGATGGCCCAGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: VRTAGWTSPSRRMSRQRCALCHM*GWPRVR
Trigger: GCGAACCCTGGGCCATCCTCACATGTGACAAAGGGC...GCAACGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCAAATATGCATCCAGTaGACAAAGGGACGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLQICIQ*TKGRRP
Trigger: GGGCCTTCGTCCCTTTGTTCACTGGATGCATATTTG...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp ACTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTCCGGACCCGGGTATGGGGCATGCTaGTGGAGAAGGAAAGAGACA +
Preference number: 4 (lower is better)
Translates to: TDPRAAVYTAKSPGLSGPGYGAC*WRRKET
Trigger: TGTCTCTTTCCTTCTCCATCAGCATGCCCCATACCC...GGGTCCGGAGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp CTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: LSATWAGTSRVVHQWGVSRCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...GCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGCGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTCCCGCACAACGAGTaGCGTGTTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHLPHNE*RVYFHC
Trigger: GCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACACGCTATGCCCACGATaGAGTAGGAATTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHTLCPR*SRNCLL
Trigger: CAGCAAACAATTCCTACTGCATCGTGGGCATAGCGT...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGCGTCCAGCATGCGGATaGCTCCTATTTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWRPACG*LLFWHC
Trigger: ACAATGCCAAAATAGGAGGCATCCGCATGCTGGACG...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGCGTCCAGCATGCGGATaGCTCCTATTTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVRPACG*LLFWHC
Trigger: ACAATGCCAAAATAGGAGGCATCCGCATGCTGGACG...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGCATCGCCGTCCAGCATaGGGATGCCTCCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGHRRPA*GCLLFW
Trigger: CCAAAATAGGAGGCATCCGCATGCTGGACGGCGATG...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTAGATGCCCAGCGACTTTaGCTCGACCACATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLDAQRL*LDHICD
Trigger: GTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATC...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCGCCCGTCCACCGTCTTaGCGTCGTCGTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: WTSKGSQSSKCGGFGHLSARPPS*RRRPAP
Trigger: GGGGGCCGGACGACGACGGCAAGACGGTGGACGGGC...GGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGCCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QTEHGNKESSACSKESAAPYSKA*LASRPG
Trigger: GCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGG...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGATGGAGCCCAGGCCCTaGCGGCCCTTTTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: TEHGNKESSACSKESAAGMEPRP*RPFLMP
Trigger: TGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCAT...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCATGGAGCCCAGGCCCTaGCGGCCCTTTTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLMEPRP*RPFLMP
Trigger: TGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCAT...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGCACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGCCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSTRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QEVPSCVKPVLHLLQFLLGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...CAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ARLAQRRALRGIESSGLALASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTATCTTTCAACTTCCCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVSFNFP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGA...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAG +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGVVRVL*CAIQYE
Trigger: CTCATACTGTATGGCACAGCAGAGCACCCGTACCAC...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAG +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGVVRVL*CAIQYE
Trigger: CTCATACTGTATGGCACAGCAGAGCACCCGTACCAC...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCAAAGGTGTGGTACGGGTaGTCTGCTGTGCCATACAGT +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPKVWYG*SAVPYS
Trigger: ACTGTATGGCACAGCAGAGCACCCGTACCACACCTT...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAAAGGTGTGGTACGGGTaGTCTGCTGTGCCATACAGT +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGKVWYG*SAVPYS
Trigger: ACTGTATGGCACAGCAGAGCACCCGTACCACACCTT...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCGACAGCGTCTTGCTaGTGTGTCCCCAAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLATASC*CVPKVA
Trigger: GGCTACTTTGGGGACACAGCAGCAAGACGCTGTCGC...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTGCGACAGCGTCTTGCTaGTGTGTCCCCAAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSATASC*CVPKVA
Trigger: GGCTACTTTGGGGACACAGCAGCAAGACGCTGTCGC...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACAGCGACAGCGTCTTGCTaGTGTGTCCCCAAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTATASC*CVPKVA
Trigger: GGCTACTTTGGGGACACAGCAGCAAGACGCTGTCGC...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGCCGGCGACAGCGTCTTaGTGCTGTGTCCCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRPATAS*CCVPKV
Trigger: TACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGG...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGACCGGCGACAGCGTCTTaGTGCTGTGTCCCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRPATAS*CCVPKV
Trigger: TACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGG...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGCCGGCGACAGCGTCTTaGTGCTGTGTCCCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLPATAS*CCVPKV
Trigger: TACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGG...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGCCGGCGACAGCGTCTTaGTGCTGTGTCCCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: TEHGNKESSACSKESAAGPATAS*CCVPKV
Trigger: TACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGG...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALTASQL*WSRSHT
Trigger: GGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGT...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCTASQL*WSRSHT
Trigger: GGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: DYRQCKGCMLSATWAGTSTASQL*WSRSHT
Trigger: GGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGT...GGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAAATGCAGCTGCCCCGTaGAAGGCTGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAANAAAP*KAESFF
Trigger: AAAGAAGGATTCAGCCTTGCACGGGGCAGCTGCATT...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCGAATGCACTCTTCTCTaGCTGGCCCCACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPECTLL*LAPRRF
Trigger: GAACCTGCGTGGGGCCAGGCAGAGAAGAGTGCATTC...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVAMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGTTGCATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: VRTAGWTSPSRRMSRQRCMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...GCAACGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: QTEHGNKESSACSKESAAMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGCCCACCTGGCTTGGGTaGTCAGAGATGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALPTWLG*SEMLLL
Trigger: CAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGG...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCTCCTCAGAAGGCTCTaGATCAGGTCGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASLLRRL*IRSRWS
Trigger: CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAG...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGCTCCTCAGAAGGCTCTaGATCAGGTCGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSLLRRL*IRSRWS
Trigger: CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAG...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACTGCCTTCTGAGAGCTaGACACTGCTCCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTLPSES*TLLPSS
Trigger: AGAGGAGGGGAGCAGTGTGCAGCTCTCAGAAGGCAG...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCGCACCGCCCAGTGGTTaGTGTAGACGGGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPAPPSG*CRRGAA
Trigger: CGCCGCGCCCCGTCTACACCAACCACTGGGCGGTGC...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTATCCAGGTTTCCAATCTaGCCCAAGTTGAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVSRFPI*PKLRYP
Trigger: CGGGTACCTCAACTTGGGCCAGATTGGAAACCTGGA...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTATGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp ACTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTCCGGACCCTGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TDPRAAVYTAKSPGLSGPWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...GGGTCCGGAGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAACTCTTCCACGCTGCCTaGACATTCATTTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKLFHAA*TFISDR
Trigger: CCGGTCGGAAATGAATGTCCAGGCAGCGTGGAAGAG...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp CTGCCGTTTACACTGCAAAGTCACCTGGGCTCTCCGGACCCCACTGCCTCCACTCTCTTCCACGCTGCCTaGACATTCATTTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: LPFTLQSHLGSPDPTASTLFHAA*TFISDR
Trigger: CCGGTCGGAAATGAATGTCCAGGCAGCGTGGAAGAG...AGTGGAGGCAGTGGGGTCCGGAGAGCCCAGGTGACTTTGCAGTGTAAACGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp CTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCGGATGCCTCCTATTTTaGCATTGTACGCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: LSATWAGTSRVVHQWGVSGCLLF*HCTLCP
Trigger: TGGGCATAGCGTACAATGCCAAAATAGGAGGCATCC...GCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCCGTCCGGCCCCCAGCTaGCACTGTAAATGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLRPAPS*HCKCRC
Trigger: ACATCGACATTTACAGTGCCAGCTGGGGGCCGGACG...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGCGTCCGGCCCCCAGCTaGCACTGTAAATGTCGATGT +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSRPAPS*HCKCRC
Trigger: ACATCGACATTTACAGTGCCAGCTGGGGGCCGGACG...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp CAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCATTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: QRMHAERDMGRDVPRSPPFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...TGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPIGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: AVRCRAPLLKQTLADSLEVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGTCACCACACTCCGGATaGCACACACTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVSPHSG*HTLVCK
Trigger: TTTACAGACCAGTGTGTGCCATCCGGAGTGTGGTGA...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622483.4
CDS-3UTR CCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDTQFKH*SALGPS
Trigger: TGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGT...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCCTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPLPRLK*TQFKHW
Trigger: CCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAG...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGCTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: QEVPSCVKPVLHLLQFLLLPRLK*TQFKHW
Trigger: CCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAG...CAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCGTCTCACACCCCTTGTaGCACCGGCGACAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVAVSHPL*HRRQRL
Trigger: AAGACGCTGTCGCCGGTGCCACAAGGGGTGTGAGAC...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCGTCTCACACCCCTTGTaGCACCGGCGACAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPIVSHPL*HRRQRL
Trigger: AAGACGCTGTCGCCGGTGCCACAAGGGGTGTGAGAC...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGTGATGCAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTGTCTCACACCCCTTGTaGCACCGGCGACAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: GDAGGPQLCEARLTPATVVSHPL*HRRQRL
Trigger: AAGACGCTGTCGCCGGTGCCACAAGGGGTGTGAGAC...AACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTGCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCT +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTASQLC*SRSHTP
Trigger: AGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGC...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGTCAAAGTAGGTGCCTaGCTCACAGTCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: AVRCRAPLLKQTLADSLEVKVGA*LTVRNA
Trigger: TGCATTCCTGACTGTGAGCCAGGCACCTACTTTGAC...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSARHLF*VEALTT
Trigger: TGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGC...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSARHLF*VEALTT
Trigger: TGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGC...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
CDS-3UTR CCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLARHLF*VEALTT
Trigger: TGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGC...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGCTTCGACACACTTTGTaGGGCAAGCCCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLLRHTL*GKPGIS
Trigger: AGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAG...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
CDS-3UTR CCA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATGCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDALLHV*LVMQEV
Trigger: GACCTCCTGCATCACCAACCACACGTGCAGCAACGC...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATCACACGCACAACTCTaGTCAATTGGTGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRSHAQL*SIGACG
Trigger: ACCACAAGCACCAATTGACCAGAGTTGTGCGTGTGA...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTCAATCTGGCCCAAGTTaGGGTACCCGTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFQSGPS*GTRAPP
Trigger: CGGCGGCGCACGGGTACCTCAACTTGGGCCAGATTG...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGCCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCCTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTGTDGH*RCGTGA
Trigger: AGCACCCGTACCACACCTTCAGTGCCCATCAGTCCC...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp TCAAGGTCGGTCTCATGGGCGGGGCAAGGGGTTGAATGTTCATCCCAAACACACGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SRSVSWAGQGVECSSQTHGTDGH*RCGTGA
Trigger: AGCACCCGTACCACACCTTCAGTGCCCATCAGTCCC...GTGTGTTTGGGATGAACATTCAACCCCTTGCCCCGCCCATGAGACCGACCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTATCCGCGAGCGGGACTaGTGGGCACTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPIRERD*WALKVW
Trigger: CCACACCTTCAGTGCCCATCAGTCCCGCTCGCGGAT...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATGCCCCGTGCAAGGCTaGATCCTTCTTTACAGACAG +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGCPVQG*ILLYRQ
Trigger: CTGTCTGTAAAGAAGGATTCAGCCTTGCACGGGGCA...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAACATCTGATCAGCTCTaGGTCAAAGTAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QRMHAERDMGRDVPRSPPTSDQL*VKVGAW
Trigger: CCAGGCACCTACTTTGACTCAGAGCTGATCAGATGT...TGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCAGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPGIPHI*SALSQS
Trigger: ACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCC...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVGIPHI*SALSQS
Trigger: ACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCC...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDGIPHI*SALSQS
Trigger: ACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCC...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEEGIPHI*SALSQS
Trigger: ACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCC...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTCAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGQVPQV*WHSPHL
Trigger: CAGATGTGGGGAATGCCATCACACCTGCGGAACCTG...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: DYRQCKGCMLSATWAGTSQVPQV*WHSPHL
Trigger: CAGATGTGGGGAATGCCATCACACCTGCGGAACCTG...GGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAATGGGAAGTGATGGATaGTTAACAATGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRMGSDG*LTMHGW
Trigger: CCAGCCATGCATTGTTAATCATCCATCACTTCCCAT...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATCCACCAATGGGGTGTaGGCACCTTGCTATTCTGCT +
Preference number: 4 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLSTNGV*APCYSA
Trigger: AGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGA...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTCCACCAATGGGGTGTaGGCACCTTGCTATTCTGCT +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCSTNGV*APCYSA
Trigger: AGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGA...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCCAGAGAGGGTCCAGGTaGCATTTAATGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLQRGSR*HLMPAP
Trigger: TGGAGCCGGCATTAAATGTCACCTGGACCCTCTCTG...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTGGCGGGGCAAGGGGTTaGATGTTCATCCCAAACACA +
Preference number: 4 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASGGARG*MFIPNT
Trigger: TGTGTTTGGGATGAACATTCAACCCCTTGCCCCGCC...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCGGGCCGCCCAGCACTTaGACCGCCCAGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GECAKFFSSVSKEVGVILGPPST*TAQWLV
Trigger: CACCAACCACTGGGCGGTGCAAGTGCTGGGCGGCCC...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTCCGGACCCCAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: LTPGLPFTLQSHLGSPDPRCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...GGGGTCCGGAGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGACGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAGCCCCTCTTCCACGCTaGCTGGACATTCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRAPLPR*LDIHFR
Trigger: TCGGAAATGAATGTCCAGGCAGCGTGGAAGAGGGGC...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLMGHNH*RSRRSW
Trigger: CCAGCTACGACGTGAACGGCAATGATTATGACCCAT...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGCTATGCCCACGATaGAGTAGGAATTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWTLCPR*SRNCLL
Trigger: CAGCAAACAATTCCTACTGCATCGTGGGCATAGCGT...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTTGGCATTGTACGCTATaGCCACGATGCAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: HAERDMGRDVPRSPPMGCWHCTL*PRCSRN
Trigger: ATTCCTACTGCATCGTGGGCATAGCGTACAATGCCA...ACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCCATCGCCGTCCAGCATaGGGATGCCTCCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLHRRPA*GCLLFW
Trigger: CCAAAATAGGAGGCATCCGCATGCTGGACGGCGATG...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCATCGCCGTCCAGCATaGGGATGCCTCCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASHRRPA*GCLLFW
Trigger: CCAAAATAGGAGGCATCCGCATGCTGGACGGCGATG...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCATGGAGCCCAGGCCCTaGCGGCCCTTTTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPIMEPRP*RPFLMP
Trigger: TGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCAT...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNTRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QRMHAERDMGRDVPRSPPISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...TGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATCTTTCAACTTCCCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGSFNFP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGA...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCTCTTTCAACTTCCCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRSFNFP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGA...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAATCTTTCAACTTCCCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKSFNFP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGA...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAG +
Preference number: 4 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRVVRVL*CAIQYE
Trigger: CTCATACTGTATGGCACAGCAGAGCACCCGTACCAC...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAG +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLVVRVL*CAIQYE
Trigger: CTCATACTGTATGGCACAGCAGAGCACCCGTACCAC...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACAGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTVQALV*IGAITA
Trigger: GGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAAC...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGGCGACAGCGTCTTGCTaGTGTGTCCCCAAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALATASC*CVPKVA
Trigger: GGCTACTTTGGGGACACAGCAGCAAGACGCTGTCGC...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAAATGCAGCTGCCCCGTaGAAGGCTGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGNAAAP*KAESFF
Trigger: AAAGAAGGATTCAGCCTTGCACGGGGCAGCTGCATT...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAATTTTCGCACAGTGAATaGACTCTTCTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEEFSHSE*TLLCLA
Trigger: GGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAA...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
CDS-3UTR GCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRVPAGA*TAQAVL
Trigger: GAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAAC...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAAGCCCGTCTTACACCTaGTACAGTTCCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTSPSYT*YSSCWS
Trigger: GCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCT...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKGAQRC*SWGDKA
Trigger: AGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACC...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASGAQRC*SWGDKA
Trigger: AGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACC...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAATTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEELGAQR*CSWGDK
Trigger: TTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAA...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGGCTAACGTGGTCTGAAGGGGTCTCTTTGCCCAGTGACATTCTGGGGTTGGGACCCACCTGGCTTGGGTaGTCAGAGATGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLTWSEGVSLPSDILGLGPTWLG*SEMLLL
Trigger: CAGGAGCAGCATCTCTGAGCACCCAAGCCAGGTGGG...TCCCAACCCCAGAATGTCACTGGGCAAAGAGACCCCTTCAGACCACGTTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAG +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKKPSPD*SVAGNE
Trigger: CTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGCAGAATGCCTCCTGTTaGCTCTCCTCAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLQNASC*LSSEGS
Trigger: AGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTG...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCACTGGACACAGCTGCCTaGCGTTCCCCGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GFSDYRQCKGCMLSATWALDTAA*RSPPGG
Trigger: TCCTCCTGGCGGGGAACGGCAGGCAGCTGTGTCCAG...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGCTCCAGGCACTCCTTTaGTGGACACAGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTLQALL*WTQLPA
Trigger: GGCAGGCAGCTGTGTCCAGCAAAGGAGTGCCTGGAG...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTAGCACCTTGCTATTCTaGTTCCCATCTTATCCCGCT +
Preference number: 4 (lower is better)
Translates to: HAERDMGRDVPRSPPMGCSTLLF*FPSYPA
Trigger: AGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCT...ACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TTTCAACCAGCTCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTGCGATCCTCTCCGGACCCCACTaGCTCCACTTGCAAAATGAC +
Preference number: 4 (lower is better)
Translates to: FQPAHPACTQPVSGRAAILSGPH*LHLQND
Trigger: GTCATTTTGCAAGTGGAGGCAGTGGGGTCCGGAGAG...GATCGCAGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGAGCTGGTTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCTGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATCTCTTCCACGCTGCCTaGACATTCATTTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDLFHAA*TFISDR
Trigger: CCGGTCGGAAATGAATGTCCAGGCAGCGTGGAAGAG...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGTCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKSLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGATCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGSLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCACCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: QRMHAERDMGRDVPRSPPPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...TGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTACCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGTGGGCACTGAAGGTGTaGTACGGGTGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: QTEHGNKESSACSKESAAWALKV*YGCSAV
Trigger: CACAGCAGAGCACCCGTACCACACCTTCAGTGCCCA...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTGGGCACTGAAGGTGTaGTACGGGTGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVAWALKV*YGCSAV
Trigger: CACAGCAGAGCACCCGTACCACACCTTCAGTGCCCA...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCAATATTAGCAGAGCCTaGGGTGGATTGAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTNISRA*GGLSCV
Trigger: TACACAGCTCAATCCACCCCAGGCTCTGCTAATATT...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622483.4
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAAGCACTGGTCTGCATTaGGGCCATCACAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKSTGLH*GHHSLC
Trigger: ACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCT...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKATQFKH*SALGPS
Trigger: TGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGT...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGTCAAAGTAGGTGCCTaGCTCACAGTCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGVKVGA*LTVRNA
Trigger: TGCATTCCTGACTGTGAGCCAGGCACCTACTTTGAC...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGACTTCGACACACTTTGTaGGGCAAGCCCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRLRHTL*GKPGIS
Trigger: AGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAG...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp CAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGCTTCGACACACTTTGTaGGGCAAGCCCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: QEVPSCVKPVLHLLQFLLLRHTL*GKPGIS
Trigger: AGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAG...CAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGGTTCGCACAGCCGGTTaGACTTCACCATCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRVRTAG*TSPSRR
Trigger: TCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGA +
Preference number: 4 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASQSGGR*TDGWMG
Trigger: TCCCATCCATCCATCCGTCCACCTTCCTCCAGACTG...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGA +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSQSGGR*TDGWMG
Trigger: TCCCATCCATCCATCCGTCCACCTTCCTCCAGACTG...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAGAGCAGGTAGACTGCTaGCCCTTTGTCACATGTGAG +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGEQVDC*PFVTCE
Trigger: CTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTC...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAGAGCAGGTAGACTGCTaGCCCTTTGTCACATGTGAG +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAEQVDC*PFVTCE
Trigger: CTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTC...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGGGGTACCTTTTGGCTaGCCACAGAATGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLGVPFG*PQNASC
Trigger: ACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCC...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCATCGGGGTACCTTTTaGCTGGCCACAGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASHRGTF*LATECL
Trigger: GAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATG...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGCGTAGTCCACCAATaGGGTGTGAGCACCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPRVVHQ*GVSTLL
Trigger: TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCG...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCCGCGTAGTCCACCAATaGGGTGTGAGCACCTTGCTA +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPRVVHQ*GVSTLL
Trigger: TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCG...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALTKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp TTCCGTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: FRSHSRLDFTISQNVSSATKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...CGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677528.1
CDS-3UTR TCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCGTAGGAATTGTTTGCTaGAGCAGCAACTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCVGIVC*SSNFSR
Trigger: GCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTAC...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp ACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACCTCGACCACATCTGTaGCATCGCCGTCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: TYLFWGEPGCQNAEPCRQPRPHL*HRRPAC
Trigger: GCATGCTGGACGGCGATGTCACAGATGTGGTCGAGG...TTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATCGATGTAGTTGGGTCTaGTGCCCAGCGACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHRCSWV*CPATLP
Trigger: AGGCAAAGTCGCTGGGCATCAGACCCAACTACATCG...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp AAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGAGGCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: KSKEMVSGLEVARSWEGRLEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...CCTCCCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGACTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPGTDGH*RCGTGA
Trigger: AGCACCCGTACCACACCTTCAGTGCCCATCAGTCCC...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTCTCCAGCTCTGGGGCTaGGAGCTCCAGCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: RGYHHFRNTSLRATTHLALQLWG*ELQHPR
Trigger: TCGCGGATGCTGGAGCTCTCAGCCCCAGAGCTGGAG...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTGCCCCGTGCAAGGCTaGATCCTTCTTTACAGACAG +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSCPVQG*ILLYRQ
Trigger: CTGTCTGTAAAGAAGGATTCAGCCTTGCACGGGGCA...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GTGACAGATGGAAGGGGCCCCTACATCTGGAGAGGCTCTAGAACCTCCTCCCAGTGCCCCGTGCAAGGCTaGATCCTTCTTTACAGACAG +
Preference number: 4 (lower is better)
Translates to: VTDGRGPYIWRGSRTSSQCPVQG*ILLYRQ
Trigger: CTGTCTGTAAAGAAGGATTCAGCCTTGCACGGGGCA...CTGGGAGGAGGTTCTAGAGCCTCTCCAGATGTAGGGGCCCCTTCCATCTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCACATCTGATCAGCTCTaGGTCAAAGTAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFTSDQL*VKVGAW
Trigger: CCAGGCACCTACTTTGACTCAGAGCTGATCAGATGT...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGGCAGCAGAACTGAATaGAGAGCTTCCGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLGSRTE*RASVRT
Trigger: TGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCC...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCGTGCGGCAGCAGAACTaGATGAAGAGCTTCCGTTCG +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCVRQQN*MKSFRS
Trigger: CGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCAC...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGATCTCCAGCTCACAGGTaGCAAGGCAAATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRSPAHR*QGKCTV
Trigger: GACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGA...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ATGAAGTTTCAACCAGCTCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTGAGAAGCCGGGGAGATaGGGCGAGGTGACGTACTTA +
Preference number: 4 (lower is better)
Translates to: MKFQPAHPACTQPVSGRAEKPGR*GEVTYL
Trigger: TAAGTACGTCACCTCGCCTCATCTCCCCGGCTTCTC...AGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGAGCTGGTTGAAACTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp TGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCAAGTTGAGGTACCCGTaGGCCGCCGCCACGCGGTCC +
Preference number: 4 (lower is better)
Translates to: WTSKGSQSSKCGGFGHLSKLRYP*AAATRS
Trigger: GGACCGCGTGGCGGCGGCGCACGGGTACCTCAACTT...GGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGRCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEERCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDMGHNH*RSRRSW
Trigger: CCAGCTACGACGTGAACGGCAATGATTATGACCCAT...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATCTCCCGCACAACGAGTaGCGTGTTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDLPHNE*RVYFHC
Trigger: GCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAATGGCATTGTACGCTATaGCCACGATGCAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEEWHCTL*PRCSRN
Trigger: ATTCCTACTGCATCGTGGGCATAGCGTACAATGCCA...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTATGGCATTGTACGCTATaGCCACGATGCAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVWHCTL*PRCSRN
Trigger: ATTCCTACTGCATCGTGGGCATAGCGTACAATGCCA...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCGATGCCCAGCGACTTTaGCTCGACCACATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: DYRQCKGCMLSATWAGTSDAQRL*LDHICD
Trigger: GTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATC...GGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGGCCCGTCCACCGTCTTaGCGTCGTCGTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKARPPS*RRRPAP
Trigger: GGGGGCCGGACGACGACGGCAAGACGGTGGACGGGC...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASCCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCTGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SGANLAARMPNHAGNRNACCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...GGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGCCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: AVRCRAPLLKQTLADSLEIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTVVRST*TKGMLF
Trigger: AAAGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398185.6
CDS-3UTR GCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTCTTTCAACTTCCCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSSFNFP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGA...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGAAGGTGTGGTACGGGTaGTCTGCTGTGCCATACAGT +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLKVWYG*SAVPYS
Trigger: ACTGTATGGCACAGCAGAGCACCCGTACCACACCTT...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAAAGGTGTGGTACGGGTaGTCTGCTGTGCCATACAGT +
Preference number: 4 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTKVWYG*SAVPYS
Trigger: ACTGTATGGCACAGCAGAGCACCCGTACCACACCTT...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGATCAGCATAAAATCCTaGAGGACAGAGGGTCACACA +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWISIKS*RTEGHT
Trigger: TGTGTGACCCTCTGTCCTGCAGGATTTTATGCTGAT...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGCTGAGTCAAAGTAGGTaGCTGGCTCACAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLLSQSR*LAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAG...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHVPAGA*TAQAVL
Trigger: GAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAAC...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCAGCCCGTCTTACACCTaGTACAGTTCCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVASPSYT*YSSCWS
Trigger: GCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCT...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCAGCCCGTCTTACACCTaGTACAGTTCCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCSPSYT*YSSCWS
Trigger: GCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGTTGCGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: VRTAGWTSPSRRMSRQRCDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...GCAACGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSGAQRC*SWGDKA
Trigger: AGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACC...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCCTCCTCAGAAGGCTCTaGATCAGGTCGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNALLRRL*IRSRWS
Trigger: CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAG...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTTCTGATTATCGACAGTaGAAAGGATGCATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HAERDMGRDVPRSPPMGCSDYRQ*KGCMLS
Trigger: GCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA...ACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACATTGTGTGACTTGCCCTaGCTTCTGAGAGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTLCDLP*LLRAAH
Trigger: GTGTGCAGCTCTCAGAAGGCAGGGCAAGTCACACAA...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp GTGACAGATGGAAGGGGCCCCTACATCTGGAGAGGCTCTAGAACCTCCTCCCAGGCAATCTTGGCTCACTaGAGCTTCACCTCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VTDGRGPYIWRGSRTSSQAILAH*SFTSWV
Trigger: AACCCAGGAGGTGAAGCTGCAGTGAGCCAAGATTGC...CTGGGAGGAGGTTCTAGAGCCTCTCCAGATGTAGGGGCCCCTTCCATCTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGCCTGGCCCTTGTTTTaGCCTTGCATTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGAWPLF*PCILML
Trigger: CAGCATTAAAATGCAAGGGCAAAACAAGGGCCAGGC...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATGAATGCACTCTTCTCTaGCTGGCCCTTGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDECTLL*LALVLP
Trigger: GGGCAAAACAAGGGCCAGGCAGAGAAGAGTGCATTC...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGGATGCCTCCTATTTTaGCATTGTACGCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKGCLLF*HCTLCP
Trigger: TGGGCATAGCGTACAATGCCAAAATAGGAGGCATCC...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFSLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACATTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGTHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGAATATTAGCAGAGCCTaGGGTGGATTGAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRNISRA*GGLSCV
Trigger: TACACAGCTCAATCCACCCCAGGCTCTGCTAATATT...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000677364.1
CDS-3UTR CCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATCACCACACTCCGGATaGCACACACTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGSPHSG*HTLVCK
Trigger: TTTACAGACCAGTGTGTGCCATCCGGAGTGTGGTGA...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000677364.1
CDS-3UTR CCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGAGCACTGGTCTGCATTaGGGCCATCACAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: TEHGNKESSACSKESAAGSTGLH*GHHSLC
Trigger: ACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCT...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGAGCACTGGTCTGCATTaGGGCCATCACAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPSTGLH*GHHSLC
Trigger: ACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCT...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATAGCACTGGTCTGCATTaGGGCCATCACAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDSTGLH*GHHSLC
Trigger: ACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCT...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLTQFKH*SALGPS
Trigger: TGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGT...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTCTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVLPRLK*TQFKHW
Trigger: CCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAG...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTAGTCAAAGTAGGTGCCTaGCTCACAGTCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLVKVGA*LTVRNA
Trigger: TGCATTCCTGACTGTGAGCCAGGCACCTACTTTGAC...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGACACACTTCCAGTCGTaGAAGTGGAAGTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: GCMLSATWAGTSRVVHQWTHFQS*KWKFFA
Trigger: TGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGT...CCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCTTCGACACACTTTGTaGGGCAAGCCCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: DYRQCKGCMLSATWAGTSLRHTL*GKPGIS
Trigger: AGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAG...GGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCGTTCGCACAGCCGGTTaGACTTCACCATCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVAVRTAG*TSPSRR
Trigger: TCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGTTCGCACAGCCGGTTaGACTTCACCATCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGVRTAG*TSPSRR
Trigger: TCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGCAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGA +
Preference number: 4 (lower is better)
Translates to: QTEHGNKESSACSKESAAQSGGR*TDGWMG
Trigger: TCCCATCCATCCATCCGTCCACCTTCCTCCAGACTG...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGTTTGTCGGAAGACTaGAGCCAACAAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWSLSED*SQQAAF
Trigger: AAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACT...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCGAGCAGGTAGACTGCTaGCCCTTTGTCACATGTGAG +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLEQVDC*PFVTCE
Trigger: CTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTC...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAATACTCCGGCCCCAGTaGTCATACATTTTATGCCCT +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGILRPQ*SYILCP
Trigger: AGGGCATAAAATGTATGACCACTGGGGCCGGAGTAT...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGGGGGTACCTTTTGGCTaGCCACAGAATGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALGVPFG*PQNASC
Trigger: ACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCC...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGAGGAGGAGGTTGCCAGGAGCTaGGAGGGGAGGAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: IQRNGKWIRGCQELGGEEEVARS*EGRREW
Trigger: CCATTCCCTCCTCCCCTCCCAGCTCCTGGCAACCTC...CTCCTCCCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGCCAGTGAGGCTAACGTaGTCTGAAGGGGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSPVRLT*SEGVSL
Trigger: CAAAGAGACCCCTTCAGACCACGTTAGCCTCACTGG...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGTTGGCCTGAGGGGTTaGATTTGTACCAGTTTTACC +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGVGLRG*ICTSFT
Trigger: GGTAAAACTGGTACAAATCCAACCCCTCAGGCCAAC...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCCTCGGGAGGCCAGGCTaGAGTACAGTGGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNALGRPG*STVVQS
Trigger: AGATTGCACCACTGTACTCCAGCCTGGCCTCCCGAG...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CAA 72 bp CTGGTCAATTGGTGCTTGTGGTGGCCAGCTGTTGGGTaGTGTGACTTGCCCTGCCTTCTGAGAGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: LVNWCLWWPAVG*CDLPCLLRAAH
Trigger: GTGTGCAGCTCTCAGAAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCACCACAAGCACCAATTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACACAATCTGGCCCAAGTTaGGGTACCCGTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTQSGPS*GTRAPP
Trigger: CGGCGGCGCACGGGTACCTCAACTTGGGCCAGATTG...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTGTAGGAATTGTTTGCTaGAGCAGCAACTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ARLAQRRALRGIESSGLAVGIVC*SSNFSR
Trigger: GCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTAC...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACAGTAGGAATTGTTTGCTaGAGCAGCAACTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTVGIVC*SSNFSR
Trigger: GCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTAC...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGGTAGGAATTGTTTGCTaGAGCAGCAACTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRVGIVC*SSNFSR
Trigger: GCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTAC...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCCGATGTAGTTGGGTCTaGTGCCCAGCGACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNARCSWV*CPATLP
Trigger: AGGCAAAGTCGCTGGGCATCAGACCCAACTACATCG...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp TGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: WTSKGSQSSKCGGFGHLSLEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...GGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNLEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGGCAAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: RQIQRNGKWIRGCQELGGSSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...CCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp ACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGTGGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: TFWSGQFFVMGAAVHCRVGTDGH*RCGTGA
Trigger: AGCACCCGTACCACACCTTCAGTGCCCATCAGTCCC...CACCCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR TCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGATCCGCGAGCGGGACTaGTGGGCACTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWIRERD*WALKVW
Trigger: CCACACCTTCAGTGCCCATCAGTCCCGCTCGCGGAT...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGTGCCCCGTGCAAGGCTaGATCCTTCTTTACAGACAG +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKCPVQG*ILLYRQ
Trigger: CTGTCTGTAAAGAAGGATTCAGCCTTGCACGGGGCA...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTGCCCCGTGCAAGGCTaGATCCTTCTTTACAGACAG +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVACPVQG*ILLYRQ
Trigger: CTGTCTGTAAAGAAGGATTCAGCCTTGCACGGGGCA...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATACATCTGATCAGCTCTaGGTCAAAGTAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDTSDQL*VKVGAW
Trigger: CCAGGCACCTACTTTGACTCAGAGCTGATCAGATGT...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRGIPHI*SALSQS
Trigger: ACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCC...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCGCAGGGCGCCGCTCCTaGAACAGACTCTGGCCGACA +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSAGRRS*NRLWPT
Trigger: TGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGC...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGGAGAAGAGTGATGTGTaGTGCCAAGCGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RVRQLGRGDLLHSRRKAREKSDV*CQAPFF
Trigger: AAAGAAAGGCGCTTGGCATCACACATCACTCTTCTC...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAGAGAAGAGTGATGTGTaGTGCCAAGCGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAEKSDV*CQAPFF
Trigger: AAAGAAAGGCGCTTGGCATCACACATCACTCTTCTC...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTGCACGGGGAGAAGAGTaGTGTGTGATGCCAAGCGCC +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFARGEE*CVMPSA
Trigger: GGCGCTTGGCATCACACATCACTCTTCTCCCCGTGC...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATCTGGGGGCGGGAGCTaGGAGATCCAGCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: IKHTYLFWGEPGCQNAEPSGGGS*EIQLWT
Trigger: AGTCCAGAGCTGGATCTCTCAGCTCCCGCCCCCAGA...TGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGCAAAGGATGCATGCTaGGCGCGACATGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GFSDYRQCKGCMLSATWAAKDAC*ARHGQG
Trigger: TCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGC...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGGTCTCTTTGCCCAGTaGCATTCTGGGGTTGGGATC +
Preference number: 4 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVGLFAQ*HSGVGI
Trigger: GATCCCAACCCCAGAATGTCACTGGGCAAAGAGACC...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp TACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGCTCAAGTTGAGGTACCCGTaGGCCGCCGCCACGCGGTCC +
Preference number: 4 (lower is better)
Translates to: YLIPKTEGKSGKGVSRELKLRYP*AAATRS
Trigger: GGACCGCGTGGCGGCGGCGCACGGGTACCTCAACTT...GAGCTCTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASRCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKRCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCRCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGMGHNH*RSRRSW
Trigger: CCAGCTACGACGTGAACGGCAATGATTATGACCCAT...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCCTCCCGCACAACGAGTaGCGTGTTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASLPHNE*RVYFHC
Trigger: GCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGACACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACCACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCTGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPCCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAAGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TYLFWGEPGCQNAEPCRQGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...TTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCAATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAG +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKVVRVL*CAIQYE
Trigger: CTCATACTGTATGGCACAGCAGAGCACCCGTACCAC...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATAAGGTGTGGTACGGGTaGTCTGCTGTGCCATACAGT +
Preference number: 4 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHKVWYG*SAVPYS
Trigger: ACTGTATGGCACAGCAGAGCACCCGTACCACACCTT...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACC +
Preference number: 4 (lower is better)
Translates to: GFSDYRQCKGCMLSATWATASQL*WSRSHT
Trigger: GGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGT...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCACGGCAAGACAGGCACTaGGTCGCAGCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPRQDRH*VAALLE
Trigger: CTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCG...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCATCAGCATAAAATCCTaGAGGACAGAGGGTCACACA +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVISIKS*RTEGHT
Trigger: TGTGTGACCCTCTGTCCTGCAGGATTTTATGCTGAT...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAATCAGCATAAAATCCTaGAGGACAGAGGGTCACACA +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGISIKS*RTEGHT
Trigger: TGTGTGACCCTCTGTCCTGCAGGATTTTATGCTGAT...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGAATGCAGCTGCCCCGTaGAAGGCTGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPNAAAP*KAESFF
Trigger: AAAGAAGGATTCAGCCTTGCACGGGGCAGCTGCATT...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGAATGCAGCTGCCCCGTaGAAGGCTGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QEVPSCVKPVLHLLQFLLNAAAP*KAESFF
Trigger: AAAGAAGGATTCAGCCTTGCACGGGGCAGCTGCATT...CAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGAGTCAAAGTAGGTaGCTGGCTCACAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSLSQSR*LAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAG...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCCTGAGTCAAAGTAGGTaGCTGGCTCACAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPLSQSR*LAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAG...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACATTTTCGCACAGTGAATaGACTCTTCTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTFSHSE*TLLCLA
Trigger: GGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAA...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR GCA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVVPAGA*TAQAVL
Trigger: GAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAAC...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTATGGATGGGAGTGCCTaGCCTCTGTGGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFMDGSA*PLWAAR
Trigger: CCTAGCTGCCCACAGAGGGCAGGCACTCCCATCCAT...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTTTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASLGAQR*CSWGDK
Trigger: TTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAA...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 4 (lower is better)
Translates to: ARLAQRRALRGIESSGLANEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCCAGAATGCCTCCTGTTaGCTCTCCTCAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCQNASC*LSSEGS
Trigger: AGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTG...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCTCTGATTATCGACAGTaGAAAGGATGCATGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVSDYRQ*KGCMLS
Trigger: GCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTTTCAACTTCCCGCTaGAGCAGTGACACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSLSTSR*SSDTGS
Trigger: ACTTCCTGTGTCACTGCTGCAGCGGGAAGTTGAAAG...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632686.1
CDS-3UTR GCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTAAACATCCCAAGGAGTaGATCAGCCATGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASKHPKE*ISHGFR
Trigger: CCTGAACCCATGGCTGATGCACTCCTTGGGATGTTT...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGATGCGTTTCCTTTACTTaGAGCCAAAGGATTCCTAGC +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGCVSFT*SQRIPS
Trigger: GCTAGGAATCCTTTGGCTGCAAGTAAAGGAAACGCA...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp GAACCTGGGTCTATCCAGCATTACTCATGCCCCTTCCACCTCATTCCTAAGGTCACACCCATTTCTAGCTaGCCGGCAGCGGTGACACCC +
Preference number: 4 (lower is better)
Translates to: EPGSIQHYSCPFHLIPKVTPISS*PAAVTP
Trigger: GGGTGTCACCGCTGCCGGGCAGCTAGAAATGGGTGT...GACCTTAGGAATGAGGTGGAAGGGGCATGAGTAATGCTGGATAGACCCAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp TTCCCAGGACTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTTGGGTGCATTCCTCATaGATCATCTCACTGACCCCT +
Preference number: 4 (lower is better)
Translates to: FPGLTPGLPFTLQSHLGSWVHSS*IISLTP
Trigger: AGGGGTCAGTGAGATGATGCATGAGGAATGCACCCA...AGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAGTCCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCTGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAACGTTCACGTCGTAGCTaGCGTAGGAATCATAATTTG +
Preference number: 4 (lower is better)
Translates to: VRCRAPLLKQTLADSLEERSRRS*RRNHNL
Trigger: CAAATTATGATTCCTACGCCAGCTACGACGTGAACG...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCGGATGCCTCCTATTTTaGCATTGTACGCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFGCLLF*HCTLCP
Trigger: TGGGCATAGCGTACAATGCCAAAATAGGAGGCATCC...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSSLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSSLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGTCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWSLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPTHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACAACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTTHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCACTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GFSDYRQCKGCMLSATWALRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGACCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: TEHGNKESSACSKESAAGVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGATGGGCACTGAAGGTGTaGTACGGGTGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGWALKV*YGCSAV
Trigger: CACAGCAGAGCACCCGTACCACACCTTCAGTGCCCA...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGTCAAAGTAGGTGCCTaGCTCACAGTCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLVKVGA*LTVRNA
Trigger: TGCATTCCTGACTGTGAGCCAGGCACCTACTTTGAC...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCGTCAAAGTAGGTGCCTaGCTCACAGTCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPVKVGA*LTVRNA
Trigger: TGCATTCCTGACTGTGAGCCAGGCACCTACTTTGAC...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTGTCAAAGTAGGTGCCTaGCTCACAGTCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSVKVGA*LTVRNA
Trigger: TGCATTCCTGACTGTGAGCCAGGCACCTACTTTGAC...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGGCACTCTTCTCTGCCTaGCCCCACGCAGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSALFSA*PHAGSA
Trigger: TGCGGAACCTGCGTGGGGCCAGGCAGAGAAGAGTGC...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
CDS-3UTR CCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGALLHV*LVMQEV
Trigger: GACCTCCTGCATCACCAACCACACGTGCAGCAACGC...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAATACTCCGGCCCCAGTaGTCATACATTTTATGCCCT +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGILRPQ*SYILCP
Trigger: AGGGCATAAAATGTATGACCACTGGGGCCGGAGTAT...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGTTCAGAGGAATTGCTTaGCCATCGGGGTACCTTTTG +
Preference number: 4 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARFRGIA*PSGYLL
Trigger: CAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGCAGCAGCTCTGTAAATaGGCTCCTGTCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTQQLCK*APVHSG
Trigger: CCCACTGTGGACAGGAGCCCATTTACAGAGCTGCTG...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGGAGTGCATCAGCCATaGGTTCAGGGATTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHGVHQP*VQGFQP
Trigger: TGGCTGAAATCCCTGAACCCATGGCTGATGCACTCC...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGATTACCTGGAAGATGCTaGAGGTCTTGTCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGLPGRC*RSCHLS
Trigger: GGACAAATGACAAGACCTCCAGCATCTTCCAGGTAA...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGATGTACCAGTTTTACCTaGAAGATGCTGGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGCTSFT*KMLEVL
Trigger: CAAGACCTCCAGCATCTTCCAGGTAAAACTGGTACA...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp TTCCGTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGTGCAGCTTCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FRSHSRLDFTISQNVSSACSFTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGAAGCTGCA...CGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGGGGCCAGGTCAGGGTaGTTTCTCTCTATGCCATCA +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGGARSG*FLSMPS
Trigger: TGATGGCATAGAGAGAAATCACCCTGACCTGGCCCC...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGTAGGAATTGTTTGCTaGAGCAGCAACTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGVGIVC*SSNFSR
Trigger: GCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTAC...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGACGATGTAGTTGGGTCTaGTGCCCAGCGACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGRCSWV*CPATLP
Trigger: AGGCAAAGTCGCTGGGCATCAGACCCAACTACATCG...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACCCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTCTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPGTDGH*RCGTGA
Trigger: AGCACCCGTACCACACCTTCAGTGCCCATCAGTCCC...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWGTDGH*RCGTGA
Trigger: AGCACCCGTACCACACCTTCAGTGCCCATCAGTCCC...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp GGTGATGCAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTACATCTGATCAGCTCTaGGTCAAAGTAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GDAGGPQLCEARLTPATVTSDQL*VKVGAW
Trigger: CCAGGCACCTACTTTGACTCAGAGCTGATCAGATGT...AACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTGCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGTCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTAGGTCCCCAGCTGTGTaGAGCCCGTCTTACACCTGC +
Preference number: 4 (lower is better)
Translates to: CLHLVTTLAPRVTIILPSRSPAV*SPSYTC
Trigger: GCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCT...AGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR TCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTGAGAAGAGTGATGTGTaGTGCCAAGCGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ARLAQRRALRGIESSGLAEKSDV*CQAPFF
Trigger: AAAGAAAGGCGCTTGGCATCACACATCACTCTTCTC...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGGAGAAGAGTGATGTGTaGTGCCAAGCGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSEKSDV*CQAPFF
Trigger: AAAGAAAGGCGCTTGGCATCACACATCACTCTTCTC...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCCAAATATGCATCCAGTaGACAAAGGGACGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPIQICIQ*TKGRRP
Trigger: GGGCCTTCGTCCCTTTGTTCACTGGATGCATATTTG...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp TTCCGTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGGCAAGTACAAGCTTCTaGCTTCACAGAGAGGCCATG +
Preference number: 4 (lower is better)
Translates to: FRSHSRLDFTISQNVSSAASTSF*LHREAM
Trigger: CATGGCCTCTCTGTGAAGTCAGAAGCTTGTACTTGC...CGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACGGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGCGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLMGHNH*RSRRSW
Trigger: CCAGCTACGACGTGAACGGCAATGATTATGACCCAT...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTCCCGCACAACGAGTaGCGTGTTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSLPHNE*RVYFHC
Trigger: GCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCCTCCCGCACAACGAGTaGCGTGTTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLLPHNE*RVYFHC
Trigger: GCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAACGCTATGCCCACGATaGAGTAGGAATTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRTLCPR*SRNCLL
Trigger: CAGCAAACAATTCCTACTGCATCGTGGGCATAGCGT...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCACGCTATGCCCACGATaGAGTAGGAATTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPTLCPR*SRNCLL
Trigger: CAGCAAACAATTCCTACTGCATCGTGGGCATAGCGT...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGTTGCCGTCCAGCATGCGGATaGCTCCTATTTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: VRTAGWTSPSRRMSRQRCRPACG*LLFWHC
Trigger: ACAATGCCAAAATAGGAGGCATCCGCATGCTGGACG...GCAACGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677528.1
CDS-3UTR GCA 90 bp GATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCTGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DYRQCKGCMLSATWAGTSCCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...GGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTCCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFTRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HLGSLQLTGDKANALSSNGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGTGATGCAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GDAGGPQLCEARLTPATVISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...AACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTGCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAG +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTVVRVL*CAIQYE
Trigger: CTCATACTGTATGGCACAGCAGAGCACCCGTACCAC...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGAAGGTGTGGTACGGGTaGTCTGCTGTGCCATACAGT +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTKVWYG*SAVPYS
Trigger: ACTGTATGGCACAGCAGAGCACCCGTACCACACCTT...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACCGGCAAGACAGGCACTaGGTCGCAGCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNRQDRH*VAALLE
Trigger: CTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCG...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCAATGCAGCTGCCCCGTaGAAGGCTGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCNAAAP*KAESFF
Trigger: AAAGAAGGATTCAGCCTTGCACGGGGCAGCTGCATT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCCTGAGTCAAAGTAGGTaGCTGGCTCACAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCLSQSR*LAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAG...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTTTTTCGCACAGTGAATaGACTCTTCTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGFSHSE*TLLCLA
Trigger: GGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAA...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR GCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCTTTTCGCACAGTGAATaGACTCTTCTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPIFSHSE*TLLCLA
Trigger: GGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAA...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TTCCGTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGTTTTCGCACAGTGAATaGACTCTTCTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FRSHSRLDFTISQNVSSAFSHSE*TLLCLA
Trigger: GGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAA...CGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKNEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAAGGAGAGCTCGGCTTaGTCAAAGGAGAGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: HLGSLQLTGDKANALSSNKESSA*SKESAA
Trigger: CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTT...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTTGTTCAGAGGAATTaGTTGGCCATCGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSFVQRN*LAIGVP
Trigger: AGGTACCCCGATGGCCAAGCAATTCCTCTGAACAAA...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTTTGTTCAGAGGAATTaGTTGGCCATCGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYFVQRN*LAIGVP
Trigger: AGGTACCCCGATGGCCAAGCAATTCCTCTGAACAAA...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACATTTGTTCAGAGGAATTaGTTGGCCATCGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTFVQRN*LAIGVP
Trigger: AGGTACCCCGATGGCCAAGCAATTCCTCTGAACAAA...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTTGAGAAGTGATTTCCCCTaGCCCCTGTCCCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SSSSHHPCPKGNHYPAILRSDFP*PLSLPR
Trigger: CCGAGGCAGGGACAGGGGGCAGGGGAAATCACTTCT...CAAGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCAACAAGGTTCATGCTTaGACGCACACGCATTCATGC +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLNKVHA*THTHSC
Trigger: GCATGAATGCGTGTGCGTGCAAGCATGAACCTTGTT...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGCTCCAGGCACTCCTTTaGTGGACACAGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWLQALL*WTQLPA
Trigger: GGCAGGCAGCTGTGTCCAGCAAAGGAGTGCCTGGAG...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TTCCCAGGACTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTCATTTCGGAAGAATCTaGTGGGTGCATTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: FPGLTPGLPFTLQSHLGSHFGRI*WVHSSC
Trigger: GCATGAGGAATGCACCCAGCAGATTCTTCCGAAATG...AGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAGTCCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTGCACCGCCCAGTGGTTaGTGTAGACGGGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSAPPSG*CRRGAA
Trigger: CGCCGCGCCCCGTCTACACCAACCACTGGGCGGTGC...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAGTAGGAATCATAATTTaGGGCCAGGTCAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAVGIII*GQVRVI
Trigger: AATCACCCTGACCTGGCCCCAAATTATGATTCCTAC...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCGTAGGAATCATAATTTaGGGCCAGGTCAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFVGIII*GQVRVI
Trigger: AATCACCCTGACCTGGCCCCAAATTATGATTCCTAC...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGACGTTCACGTCGTAGCTaGCGTAGGAATCATAATTTG +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGRSRRS*RRNHNL
Trigger: CAAATTATGATTCCTACGCCAGCTACGACGTGAACG...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCCGTTCACGTCGTAGCTaGCGTAGGAATCATAATTTG +
Preference number: 4 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRRSRRS*RRNHNL
Trigger: CAAATTATGATTCCTACGCCAGCTACGACGTGAACG...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGGATGCCTCCTATTTTaGCATTGTACGCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLGCLLF*HCTLCP
Trigger: TGGGCATAGCGTACAATGCCAAAATAGGAGGCATCC...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCTCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCSLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCAAGGTCGGTCTCATGGGCGGGGCAAGGGGTTGAATGTTCATCCCAAACACACTTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: SRSVSWAGQGVECSSQTHFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...GTGTGTTTGGGATGAACATTCAACCCCTTGCCCCGCCCATGAGACCGACCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPITHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCCTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPLRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGCTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWLRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp AAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGAGGGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: KSKEMVSGLEVARSWEGRGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...CCTCCCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPIWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGTGTGGGCACTGAAGGTGTaGTACGGGTGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TFWSGQFFVMGAAVHCRVWALKV*YGCSAV
Trigger: CACAGCAGAGCACCCGTACCACACCTTCAGTGCCCA...CACCCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CCA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTTCAGGAACTTCCACCTaGGAGGGTGACAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RGYHHFRNTSLRATTHLASGTST*EGDRAA
Trigger: GGCTGCCCTGTCACCCTCCCAGGTGGAAGTTCCTGA...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAAATATTAGCAGAGCCTaGGGTGGATTGAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKANISRA*GGLSCV
Trigger: TACACAGCTCAATCCACCCCAGGCTCTGCTAATATT...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000677364.1
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAGTCTCACACCCCTTGTaGCACCGGCGACAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKVSHPL*HRRQRL
Trigger: AAGACGCTGTCGCCGGTGCCACAAGGGGTGTGAGAC...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGGTCTCACACCCCTTGTaGCACCGGCGACAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSVSHPL*HRRQRL
Trigger: AAGACGCTGTCGCCGGTGCCACAAGGGGTGTGAGAC...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCGTCAAAGTAGGTGCCTaGCTCACAGTCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCVKVGA*LTVRNA
Trigger: TGCATTCCTGACTGTGAGCCAGGCACCTACTTTGAC...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCACACACTTCCAGTCGTaGAAGTGGAAGTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCTHFQS*KWKFFA
Trigger: TGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGT...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFARHLF*VEALTT
Trigger: TGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGC...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: GFSDYRQCKGCMLSATWAARHLF*VEALTT
Trigger: TGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGC...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTGTTCGCACAGCCGGTTaGACTTCACCATCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPVRTAG*TSPSRR
Trigger: TCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAGGTGGACGGATGGATaGATGGGAGTGCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPRWTDG*MGVPAL
Trigger: GAGGGCAGGCACTCCCATCCATCCATCCGTCCACCT...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTAGGAAGGTGGACGGATaGATGGATGGGAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFRKVDG*MDGSAC
Trigger: GCAGGCACTCCCATCCATCCATCCGTCCACCTTCCT...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAACCAGGGTTCGCCAGCTaGGCCGGGGAGATTTACTAC +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKPGFAS*AGEIYY
Trigger: GTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGG...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGCCAGGGTTCGCCAGCTaGGCCGGGGAGATTTACTAC +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSPGFAS*AGEIYY
Trigger: GTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGG...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGACATCGGGGTACCTTTTaGCTGGCCACAGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGHRGTF*LATECL
Trigger: GAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATG...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGGGAGCAGGACAATATaGAGAAAGACGAGGTCGAAA +
Preference number: 4 (lower is better)
Translates to: TEHGNKESSACSKESAAGGSRTI*RKTRSK
Trigger: TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCC...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTGGGAGCAGGACAATATaGAGAAAGACGAGGTCGAAA +
Preference number: 4 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSGSRTI*RKTRSK
Trigger: TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCC...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCACAACTCTGGTCAATTaGTGCTTGTGGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCTTLVN*CLWWPA
Trigger: AGCTGGCCACCACAAGCACCAATTGACCAGAGTTGT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp TTCCCAGGACTGACCCCAGGGCTGCCGTTTACACTGCAAAGTCACCTGGGCTCTTTCGGAAGAATCTGCTaGGTGCATTCCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: FPGLTPGLPFTLQSHLGSFGRIC*VHSSCI
Trigger: GATGCATGAGGAATGCACCCAGCAGATTCTTCCGAA...AGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCCCTGGGGTCAGTCCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCAGCTAGCCTACGCTTaGGTGACGCTGGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHQLAYA*VTLARG
Trigger: GCCTCGGGCCAGCGTCACCCAAGCGTAGGCTAGCTG...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CAA 72 bp TTGTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTaGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LFRGIAWPSGYL*AGHRMPPVASP
Trigger: AGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KRTSFLKLRANLGKGFQEPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCACGATGTAGTTGGGTCTaGTGCCCAGCGACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GFSDYRQCKGCMLSATWARCSWV*CPATLP
Trigger: AGGCAAAGTCGCTGGGCATCAGACCCAACTACATCG...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPELEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSLEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: QTEHGNKESSACSKESAAKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: KRTSFLKLRANLGKGFQESSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp TTTTACCTGGAAGATGCTGGAGGTCTTGTCATTTGTCCCATCAACTGGAGAAGGTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: FYLEDAGGLVICPINWRRSSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...CCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTCCAGGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGACTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGGCAGCAGAACTGAATaGAGAGCTTCCGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGGSRTE*RASVRT
Trigger: TGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCC...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAACCTATTCAAGGGAATTaGTCAAGCAGATCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKPIQGN*SSRSVH
Trigger: ATGCACAGATCTGCTTGATCAATTCCCTTGAATAGG...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGCCATGTCCAAAGTGCTaGGCCTCTGGGGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEPCPKC*ASGGGS
Trigger: GCTCCCGCCCCCAGAGGCTCAGCACTTTGGACATGG...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTCCATGTCCAAAGTGCTaGGCCTCTGGGGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLPCPKC*ASGGGS
Trigger: GCTCCCGCCCCCAGAGGCTCAGCACTTTGGACATGG...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp TTCCGTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGCCCTCCCTGAAATTCTaGATCCACTCTGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: FRSHSRLDFTISQNVSSAPSLKF*IHSGFS
Trigger: TGAGAATCCAGAGTGGATTCAGAATTTCAGGGAGGG...CGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGATGCTGCACCCCTCCCTaGAATTCTGAATCCACTCTG +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGCCTPP*NSESTL
Trigger: CAGAGTGGATTCAGAATTTCAGGGAGGGGTGCAGCA...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACACTTGCCCTGCCTTCTaGGAGCTGCACACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNTCPAF*ELHTAP
Trigger: GGGAGCAGTGTGCAGCTCTCAGAAGGCAGGGCAAGT...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp CACCTGGGCTCTCCGGACCCCACTGCCTCCACTTGCAAAATGACAGTGACACAAGGAGATGAGGCGAGGTaGCGTACTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: HLGSPDPTASTCKMTVTQGDEAR*RTYFHC
Trigger: GCAATGAAAATAAGTACGTCACCTCGCCTCATCTCC...TTGTGTCACTGTCATTTTGCAAGTGGAGGCAGTGGGGTCCGGAGAGCCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPIMGHNH*RSRRSW
Trigger: CCAGCTACGACGTGAACGGCAATGATTATGACCCAT...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATCGTGTTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDRVYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAACACG...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCCTCCCGCACAACGAGTaGCGTGTTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPILPHNE*RVYFHC
Trigger: GCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGCTCCCGCACAACGAGTaGCGTGTTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALLPHNE*RVYFHC
Trigger: GCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCTGGCATTGTACGCTATaGCCACGATGCAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCWHCTL*PRCSRN
Trigger: ATTCCTACTGCATCGTGGGCATAGCGTACAATGCCA...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGTGGCATTGTACGCTATaGCCACGATGCAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALWHCTL*PRCSRN
Trigger: ATTCCTACTGCATCGTGGGCATAGCGTACAATGCCA...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCCGTCCAGCATGCGGATaGCTCCTATTTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNARPACG*LLFWHC
Trigger: ACAATGCCAAAATAGGAGGCATCCGCATGCTGGACG...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACGCCCGTCCACCGTCTTaGCGTCGTCGTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYARPPS*RRRPAP
Trigger: GGGGGCCGGACGACGACGGCAAGACGGTGGACGGGC...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGPYSKA*LASRPG
Trigger: GCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGG...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCATGGAGCCCAGGCCCTaGCGGCCCTTTTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPMEPRP*RPFLMP
Trigger: TGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCAT...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AGGCAAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: RQIQRNGKWIRGCQELGGATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...CCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AGGCAAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RQIQRNGKWIRGCQELGGVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...CCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GECAKFFSSVSKEVGVILVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp GGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATCCAACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GQVLYYFIYMKCPGEANPTRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...TGGATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GECAKFFSSVSKEVGVILGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp GTGACAGATGGAAGGGGCCCCTACATCTGGAGAGGCTCTAGAACCTCCTCCCAGATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: VTDGRGPYIWRGSRTSSQIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...CTGGGAGGAGGTTCTAGAGCCTCTCCAGATGTAGGGGCCCCTTCCATCTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGTCTTTCAACTTCCCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGSFNFP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGA...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGATCAGCATAAAATCCTaGAGGACAGAGGGTCACACA +
Preference number: 4 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSISIKS*RTEGHT
Trigger: TGTGTGACCCTCTGTCCTGCAGGATTTTATGCTGAT...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGATCAGCATAAAATCCTaGAGGACAGAGGGTCACACA +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLISIKS*RTEGHT
Trigger: TGTGTGACCCTCTGTCCTGCAGGATTTTATGCTGAT...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAGACTTTCTAAGCCACTaGTGCAGTTTCAGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HGNKESSACSKESAAGDRDFLSH*CSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGGACTTTCTAAGCCACTaGTGCAGTTTCAGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QEVPSCVKPVLHLLQFLLDFLSH*CSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC...CAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTAAGGAGAGCTCGGCTTaGTCAAAGGAGAGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: RGYHHFRNTSLRATTHLAKESSA*SKESAA
Trigger: CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTT...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTGGCTGGCCACAGAATaGCTCCTGTTGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSWLATE*LLLPLL
Trigger: GAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCA...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCATGGCTGGCCACAGAATaGCTCCTGTTGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPWLATE*LLLPLL
Trigger: GAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCA...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGTGGGGGCTGCTGTGCATTaGAGGGTGCTTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: TFWSGQFFVMGAAVHCRVGAAVH*RVLSSI
Trigger: AATGCTGCTAAGCACCCTGCAATGCACAGCAGCCCC...CACCCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558864.5
ENST00000558951.5
CDS-3UTR GCA 90 bp TTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCCCTGCCCCCTGTCCCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FHFFWPEFLNLGTIDILVPAPCP*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGGACAGGGGGCAGG...GACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCAGCACCTTGCTATTCTaGTTCCCATCTTATCCCGCT +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPISTLLF*FPSYPA
Trigger: AGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCT...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTGCACCGCCCAGTGGTTaGTGTAGACGGGGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSAPPSG*CRRGAA
Trigger: CGCCGCGCCCCGTCTACACCAACCACTGGGCGGTGC...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CATGCCCCTTCCACCTCATTCCTAAGGTCACAGAGTCACAAAAGCTCAGGCACGTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HAPSTSFLRSQSHKSSGTFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...CGTGCCTGAGCTTTTGTGACTCTGTGACCTTAGGAATGAGGTGGAAGGGGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTCTCTTCCACGCTGCCTaGACATTCATTTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFLFHAA*TFISDR
Trigger: CCGGTCGGAAATGAATGTCCAGGCAGCGTGGAAGAG...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTGTAGGAATCATAATTTaGGGCCAGGTCAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: ARLAQRRALRGIESSGLAVGIII*GQVRVI
Trigger: AATCACCCTGACCTGGCCCCAAATTATGATTCCTAC...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCCGTTCACGTCGTAGCTaGCGTAGGAATCATAATTTG +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPRSRRS*RRNHNL
Trigger: CAAATTATGATTCCTACGCCAGCTACGACGTGAACG...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: QRMHAERDMGRDVPRSPPIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...TGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGATGCCCAGACGAAAATaGAGCCCAGGCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KRTSFLKLRANLGKGFQEMPRRK*SPGPAG
Trigger: GCCGGCAGGGCCTGGGCTCCATTTTCGTCTGGGCAT...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGATTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGTCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: KRTSFLKLRANLGKGFQESLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCT +
Preference number: 4 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHASQLC*SRSHTP
Trigger: AGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGC...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGCACTTTTTACAGCTTaGGTGGCATTTAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGALFTA*VAFKAI
Trigger: AATTGCCTTAAATGCCACCCAAGCTGTAAAAAGTGC...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGACACACTTCCAGTCGTaGAAGTGGAAGTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLTHFQS*KWKFFA
Trigger: TGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGT...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
CDS-3UTR CCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACGCCCTCACCACAGGCTaGCACACACTTCCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNALTTG*HTLPVV
Trigger: CACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGC...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSARHLF*VEALTT
Trigger: TGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGC...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGGCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSALLHV*LVMQEV
Trigger: GACCTCCTGCATCACCAACCACACGTGCAGCAACGC...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAGCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKALLHV*LVMQEV
Trigger: GACCTCCTGCATCACCAACCACACGTGCAGCAACGC...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCAGGTGGACGGATGGATaGATGGGAGTGCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSRWTDG*MGVPAL
Trigger: GAGGGCAGGCACTCCCATCCATCCATCCGTCCACCT...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPTTHLA*VLRDAA
Trigger: AGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGT...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAAGTTTGTCGGAAGACTaGAGCCAACAAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTSLSED*SQQAAF
Trigger: AAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACT...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKDSVNL*SQKLLQ
Trigger: TTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATC...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGCAGGTAGACTGCTaGCCCTTTGTCACATGTGAG +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGEQVDC*PFVTCE
Trigger: CTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTC...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGATACTCCGGCCCCAGTaGTCATACATTTTATGCCCT +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKILRPQ*SYILCP
Trigger: AGGGCATAAAATGTATGACCACTGGGGCCGGAGTAT...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCAAAGTGCTGAGCCTCTaGGGGCGGGAGCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPKVLSL*GRELRD
Trigger: ATCTCTCAGCTCCCGCCCCCAGAGGCTCAGCACTTT...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCATTCTGGGGCGAACCTaGCTGCCAGAATGCCGAACC +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPILGRT*LPECRT
Trigger: GGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAAT...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGACCAAGTCCTGTCCCTaGGAAAAGAAGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKTKSCP*EKKSQE
Trigger: TTCTTGGCTCTTCTTTTCCCAGGGACAGGACTTGGT...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTACTGTAAGCTCTCAGTaGGCAGCTCGGATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPTVSSQ*AARICW
Trigger: CCAGCAAATCCGAGCTGCCCACTGAGAGCTTACAGT...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCAATCTGGCCCAAGTTaGGGTACCCGTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFQSGPS*GTRAPP
Trigger: CGGCGGCGCACGGGTACCTCAACTTGGGCCAGATTG...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATCAATCTGGCCCAAGTTaGGGTACCCGTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANQSGPS*GTRAPP
Trigger: CGGCGGCGCACGGGTACCTCAACTTGGGCCAGATTG...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GECAKFFSSVSKEVGVILTKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp ACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAAGTAGGAATTGTTTGCTaGAGCAGCAACTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TYLFWGEPGCQNAEPCRQVGIVC*SSNFSR
Trigger: GCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTAC...TTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp TGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACCCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: CPSAVFHRDYQSSCSICHPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...GTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR TCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSLEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSSSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPESSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp ATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGTCTTCTGTGGTCAGTTaGTTTGCAACAGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: IYSGANLAARMPNHAGNRSSVVS*FATGVS
Trigger: TGAGACTCCTGTTGCAAATCAACTGACCACAGAAGA...CCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAACATCTGATCAGCTCTaGGTCAAAGTAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGTSDQL*VKVGAW
Trigger: CCAGGCACCTACTTTGACTCAGAGCTGATCAGATGT...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCCAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSQVPQV*WHSPHL
Trigger: CAGATGTGGGGAATGCCATCACACCTGCGGAACCTG...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACGCACGGGGAGAAGAGTaGTGTGTGATGCCAAGCGCC +
Preference number: 4 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHARGEE*CVMPSA
Trigger: GGCGCTTGGCATCACACATCACTCTTCTCCCCGTGC...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGATCTTATTTATAGTCTaGCCAAACCGTCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLILFIV*PNRPQT
Trigger: AGTCTGGGGACGGTTTGGTCAGACTATAAATAAGAT...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GTGACAGATGGAAGGGGCCCCTACATCTGGAGAGGCTCTAGAACCTCCTCCCAGATCTTATTTATAGTCTaGCCAAACCGTCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: VTDGRGPYIWRGSRTSSQILFIV*PNRPQT
Trigger: AGTCTGGGGACGGTTTGGTCAGACTATAAATAAGAT...CTGGGAGGAGGTTCTAGAGCCTCTCCAGATGTAGGGGCCCCTTCCATCTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATGGGAAGTGATGGATaGTTAACAATGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCMGSDG*LTMHGW
Trigger: CCAGCCATGCATTGTTAATCATCCATCACTTCCCAT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGCCTATTCAAGGGAATTaGTCAAGCAGATCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRPIQGN*SSRSVH
Trigger: ATGCACAGATCTGCTTGATCAATTCCCTTGAATAGG...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTCCTATTCAAGGGAATTaGTCAAGCAGATCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: ARLAQRRALRGIESSGLAPIQGN*SSRSVH
Trigger: ATGCACAGATCTGCTTGATCAATTCCCTTGAATAGG...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTTCTCCAGCTCACAGGTaGCAAGGCAAATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFSPAHR*QGKCTV
Trigger: GACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGA...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CACTGGCCTGGACGAGCCTCTAAGACACTAAGACATGAAGTTTCAACCAGCTCAATGAATTCCCAGGACTaGCCCCAGGGCTGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: HWPGRASKTLRHEVSTSSMNSQD*PQGCRL
Trigger: TAAACGGCAGCCCTGGGGTCAGTCCTGGGAATTCAT...TGAGCTGGTTGAAACTTCATGTCTTAGTGTCTTAGAGGCTCGTCCAGGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp CACTGGCCTGGACGAGCCTCTAAGACACTAAGACATGAAGTTTCAACCAGCTCAGCCCCTCTTCCACGCTaGCTGGACATTCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: HWPGRASKTLRHEVSTSSAPLPR*LDIHFR
Trigger: TCGGAAATGAATGTCCAGGCAGCGTGGAAGAGGGGC...TGAGCTGGTTGAAACTTCATGTCTTAGTGTCTTAGAGGCTCGTCCAGGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCCGTGTTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCRVYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAACACG...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCGATGCCCAGCGACTTTaGCTCGACCACATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: GECAKFFSSVSKEVGVILDAQRL*LDHICD
Trigger: GTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATC...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGGCCCGTCCACCGTCTTaGCGTCGTCGTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILARPPS*RRRPAP
Trigger: GGGGGCCGGACGACGACGGCAAGACGGTGGACGGGC...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACATGGAGCCCAGGCCCTaGCGGCCCTTTTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNMEPRP*RPFLMP
Trigger: TGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCAT...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: WTSKGSQSSKCGGFGHLSPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...GGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACACCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CTATTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LLTFWSGQFFVMGAAVHCLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...GCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR GCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGCCTGCACTAAGGGGATaGTCTTTGCTTCTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGPALRG*SLLLEP
Trigger: TGGCTCTAGAAGCAAAGAGCATCCCCTTAGTGCAGG...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398185.6
CDS-3UTR GCA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAG +
Preference number: 4 (lower is better)
Translates to: HLGSLQLTGDKANALSSNVVRVL*CAIQYE
Trigger: CTCATACTGTATGGCACAGCAGAGCACCCGTACCAC...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTCCGGCGACAGCGTCTTaGTGCTGTGTCCCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: KLMVPEAAPKPELWIPRIPATAS*CCVPKV
Trigger: TACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGG...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGCATAAAATCCTaGAGGACAGAGGGTCACACA +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCISIKS*RTEGHT
Trigger: TGTGTGACCCTCTGTCCTGCAGGATTTTATGCTGAT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGAGCCCGTCTTACACCTaGTACAGTTCCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSSPSYT*YSSCWS
Trigger: GCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCT...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAAGCCCGTCTTACACCTaGTACAGTTCCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKSPSYT*YSSCWS
Trigger: GCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCT...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RGYHHFRNTSLRATTHLADKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGNEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCAAACCGTCCCCAGACTaGTCAGTGGCAGGCAACGAG +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSKPSPD*SVAGNE
Trigger: CTCGTTGCCTGCCACTGAGCAGTCTGGGGACGGTTT...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGACTTTCTAAGCCACTaGTGCAGTTTCAGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHDFLSH*CSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGGACTTTCTAAGCCACTaGTGCAGTTTCAGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALDFLSH*CSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGTCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTGGGGCTGCTGTGCATTaGAGGGTGCTTAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: CLHLVTTLAPRVTIILPSGAAVH*RVLSSI
Trigger: AATGCTGCTAAGCACCCTGCAATGCACAGCAGCCCC...AGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp TCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTTGCTTTGTCATGGGGGCTaGTGTGCATTGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SSSSHHPCPKGNHYPAILLCHGG*CALQGA
Trigger: AGCACCCTGCAATGCACAGCAGCCCCCATGACAAAG...CAAGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCACGCACACGCATTCATaGAGTCAATCAACAACTGTT +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLTHTHS*SQSTTV
Trigger: AACAGTTGTTGATTGACTGCATGAATGCGTGTGCGT...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCGTAGGAATCATAATTTaGGGCCAGGTCAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: VPRSPPMGCEHLAILLPIVGIII*GQVRVI
Trigger: AATCACCCTGACCTGGCCCCAAATTATGATTCCTAC...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGGTAGGAATCATAATTTaGGGCCAGGTCAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKVGIII*GQVRVI
Trigger: AATCACCCTGACCTGGCCCCAAATTATGATTCCTAC...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCCGTTCACGTCGTAGCTaGCGTAGGAATCATAATTTG +
Preference number: 4 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVARSRRS*RRNHNL
Trigger: CAAATTATGATTCCTACGCCAGCTACGACGTGAACG...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACAGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: TEHGNKESSACSKESAAGAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCAGTTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPVYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAAC...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGGATGCCTCCTATTTTaGCATTGTACGCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVGCLLF*HCTLCP
Trigger: TGGGCATAGCGTACAATGCCAAAATAGGAGGCATCC...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTCGTCCGGCCCCCAGCTaGCACTGTAAATGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LPKAAKVLNVVALVICPSRPAPS*HCKCRC
Trigger: ACATCGACATTTACAGTGCCAGCTGGGGGCCGGACG...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTATGCCCAGACGAAAATaGAGCCCAGGCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLMPRRK*SPGPAG
Trigger: GCCGGCAGGGCCTGGGCTCCATTTTCGTCTGGGCAT...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHLRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGAGGTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: KSKEMVSGLEVARSWEGRSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...CCTCCCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCATCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAATCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACGTCTCACACCCCTTGTaGCACCGGCGACAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHVSHPL*HRRQRL
Trigger: AAGACGCTGTCGCCGGTGCCACAAGGGGTGTGAGAC...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGGCACTTTTTACAGCTTaGGTGGCATTTAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGALFTA*VAFKAI
Trigger: AATTGCCTTAAATGCCACCCAAGCTGTAAAAAGTGC...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGCACTTTTTACAGCTTaGGTGGCATTTAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: KAVRCRAPLLKQTLADSLALFTA*VAFKAI
Trigger: AATTGCCTTAAATGCCACCCAAGCTGTAAAAAGTGC...CAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTAGCACTTTTTACAGCTTaGGTGGCATTTAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLALFTA*VAFKAI
Trigger: AATTGCCTTAAATGCCACCCAAGCTGTAAAAAGTGC...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGTCAAAGTAGGTGCCTaGCTCACAGTCAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGVKVGA*LTVRNA
Trigger: TGCATTCCTGACTGTGAGCCAGGCACCTACTTTGAC...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCAGGAAGGTGGACGGATaGATGGATGGGAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSRKVDG*MDGSAC
Trigger: GCAGGCACTCCCATCCATCCATCCGTCCACCTTCCT...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAACAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGA +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKQSGGR*TDGWMG
Trigger: TCCCATCCATCCATCCGTCCACCTTCCTCCAGACTG...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLDSVNL*SQKLLQ
Trigger: TTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATC...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAGGGGTACCTTTTGGCTaGCCACAGAATGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKGVPFG*PQNASC
Trigger: ACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCC...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGGCTAACGTGGTCTGAAGGGGTCTCTTTGCCCAGTGACATTCTGGGGTTGGGATTCAGAGGAATTGCTTaGCCATCGGGGTACCTTTTG +
Preference number: 4 (lower is better)
Translates to: RLTWSEGVSLPSDILGLGFRGIA*PSGYLL
Trigger: CAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA...TCCCAACCCCAGAATGTCACTGGGCAAAGAGACCCCTTCAGACCACGTTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp GCCACATTCCAGAAGCCCTCCTCCTGTCTTCATCTAGTCACCACCCTTGCCCCAATATACTCCCAGGGATaGAATTACTGGGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: ATFQKPSSCLHLVTTLAPIYSQG*NYWVIG
Trigger: CCCTATGACCCAGTAATTCCATCCCTGGGAGTATAT...TGGGGCAAGGGTGGTGACTAGATGAAGACAGGAGGAGGGCTTCTGGAATGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp ATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGGTTCCCTCTCTTCTGTaGTCAGTTGATTTGCAACAG +
Preference number: 4 (lower is better)
Translates to: IYSGANLAARMPNHAGNRVPSLL*SVDLQQ
Trigger: CTGTTGCAAATCAACTGACCACAGAAGAGAGGGAAC...CCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTAAAGTGCTGAGCCTCTaGGGGCGGGAGCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LPKAAKVLNVVALVICPSKVLSL*GRELRD
Trigger: ATCTCTCAGCTCCCGCCCCCAGAGGCTCAGCACTTT...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACATCATTTTGTGTGCCGTaGAAAGAAATACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTSFCVP*KEIQAP
Trigger: AGGAGCCTGTATTTCTTTCCACGGCACACAAAATGA...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp TTTAGAGGAATGATAAGAGCTCAGGGTATGGGGCATGCTGATGGAGAAGGAAAGCACTGCAAAGTCACCTaGGCTCTCCGGACCCCACTG +
Preference number: 4 (lower is better)
Translates to: FRGMIRAQGMGHADGEGKHCKVT*ALRTPL
Trigger: CAGTGGGGTCCGGAGAGCCCAGGTGACTTTGCAGTG...CTTTCCTTCTCCATCAGCATGCCCCATACCCTGAGCTCTTATCATTCCTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR TCA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACACGATGTAGTTGGGTCTaGTGCCCAGCGACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTRCSWV*CPATLP
Trigger: AGGCAAAGTCGCTGGGCATCAGACCCAACTACATCG...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGG +
Preference number: 4 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGLEPRR*CPPPWG
Trigger: CCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAG...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCACTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCATCCGCGAGCGGGACTaGTGGGCACTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRAIRERD*WALKVW
Trigger: CCACACCTTCAGTGCCCATCAGTCCCGCTCGCGGAT...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAATGCCCCGTGCAAGGCTaGATCCTTCTTTACAGACAG +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKCPVQG*ILLYRQ
Trigger: CTGTCTGTAAAGAAGGATTCAGCCTTGCACGGGGCA...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGTGCCCCGTGCAAGGCTaGATCCTTCTTTACAGACAG +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWCPVQG*ILLYRQ
Trigger: CTGTCTGTAAAGAAGGATTCAGCCTTGCACGGGGCA...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR TCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAGGCAGCAGAACTGAATaGAGAGCTTCCGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPGSRTE*RASVRT
Trigger: TGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCC...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACGTGCGGCAGCAGAACTaGATGAAGAGCTTCCGTTCG +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNVRQQN*MKSFRS
Trigger: CGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCAC...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATGCCCTTTGTCACATGTaGGGATGGCCCAGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYALCHM*GWPRVR
Trigger: GCGAACCCTGGGCCATCCTCACATGTGACAAAGGGC...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCTTATTTATAGTCTaGCCAAACCGTCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCILFIV*PNRPQT
Trigger: AGTCTGGGGACGGTTTGGTCAGACTATAAATAAGAT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTATGGGAAGTGATGGATaGTTAACAATGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVMGSDG*LTMHGW
Trigger: CCAGCCATGCATTGTTAATCATCCATCACTTCCCAT...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATCCTATTCAAGGGAATTaGTCAAGCAGATCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHPIQGN*SSRSVH
Trigger: ATGCACAGATCTGCTTGATCAATTCCCTTGAATAGG...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTTCTCCAGCTCACAGGTaGCAAGGCAAATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: RGYHHFRNTSLRATTHLASPAHR*QGKCTV
Trigger: GACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGA...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGGGGGCGGGAGCTaGGAGATCCAGCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: WSSVPLQYFTEITKALVQSGGGS*EIQLWT
Trigger: AGTCCAGAGCTGGATCTCTCAGCTCCCGCCCCCAGA...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR TCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCACCCAGAAAGTTGGCCTaGGGGGTTGGATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPPRKLA*GVGFVP
Trigger: TGGTACAAATCCAACCCCTCAGGCCAACTTTCTGGG...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGGGGCCGCCCAGCACTTaGACCGCCCAGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LQIHMELHGTQNSQNNLEGPPST*TAQWLV
Trigger: CACCAACCACTGGGCGGTGCAAGTGCTGGGCGGCCC...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACGTGTTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTRVYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAACACG...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTGTTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPRVYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAACACG...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAAACGCTATGCCCACGATaGAGTAGGAATTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TYLFWGEPGCQNAEPCRQTLCPR*SRNCLL
Trigger: CAGCAAACAATTCCTACTGCATCGTGGGCATAGCGT...TTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACGATGCCCAGCGACTTTaGCTCGACCACATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNDAQRL*LDHICD
Trigger: GTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATC...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCGCCCGTCCACCGTCTTaGCGTCGTCGTCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSARPPS*RRRPAP
Trigger: GGGGGCCGGACGACGACGGCAAGACGGTGGACGGGC...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSPYSKA*LASRPG
Trigger: GCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGG...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGCCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEPYSKA*LASRPG
Trigger: GCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGG...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACTGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: HLGSLQLTGDKANALSSNCCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACAGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KLMVPEAAPKPELWIPRIVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGACCCGCTGGTCCGAGTaGTCCGCGCAGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILTRWSE*SAQALV
Trigger: GACCAGCGCCTGCGCGGAGCACTCGGACCAGCGGGT...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAAAGGTGTGGTACGGGTaGTCTGCTGTGCCATACAGT +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKKVWYG*SAVPYS
Trigger: ACTGTATGGCACAGCAGAGCACCCGTACCACACCTT...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCATCAGCATAAAATCCTaGAGGACAGAGGGTCACACA +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAISIKS*RTEGHT
Trigger: TGTGTGACCCTCTGTCCTGCAGGATTTTATGCTGAT...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAAATGCAGCTGCCCCGTaGAAGGCTGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GFSDYRQCKGCMLSATWANAAAP*KAESFF
Trigger: AAAGAAGGATTCAGCCTTGCACGGGGCAGCTGCATT...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCGCTCACAGTCAGGAATaGAGCTGCCCCGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSAHSQE*SCPVQG
Trigger: GCCTTGCACGGGGCAGCTGCATTCCTGACTGTGAGC...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTGATAAAGCTGTCAGGTaGAGGGCGCCGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: KLMVPEAAPKPELWIPRIDKAVR*RAPLLK
Trigger: TTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTCCTCAGAAGGCTCTaGATCAGGTCGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHLLRRL*IRSRWS
Trigger: CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAG...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCACAGAATGCCTCCTGTTaGCTCTCCTCAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPQNASC*LSSEGS
Trigger: AGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTG...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCATGGCTGGCCACAGAATaGCTCCTGTTGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISWLATE*LLLPLL
Trigger: GAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCA...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGGCAAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGGAATGGGGAGTGGCTaGTTCATGGGTATGGGGTTT +
Preference number: 4 (lower is better)
Translates to: RQIQRNGKWIRGCQELGGGMGSG*FMGMGF
Trigger: AAACCCCATACCCATGAAGCAGCCACTCCCCATTCC...CCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTACCTGGCTGCCAGAATaGCGAACCATGCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGTWLPE*RTMQAT
Trigger: TGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGT...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTGGGGCGAACCTGGCTaGCAGAATGCCGAACCATGC +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLWGEPG*QNAEPC
Trigger: GCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCA...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp ACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCAAATACAGGCTCCTGTaGCATGGGATGTTAACTCTT +
Preference number: 4 (lower is better)
Translates to: TFWLATECLLLPLLRRLCKYRLL*HGMLTL
Trigger: AAGAGTTAACATCCCATGGCACAGGAGCCTGTATTT...GCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACTGGGCAGCTCGGATTTaGTGGTATCTGGGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNWAARI*WYLGSR
Trigger: CCTAGAGCCCAGATACCAGCAAATCCGAGCTGCCCA...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp CGCCCACCATTTCGGAAGAATCTGCTGGGTGCATTCCTCATGCATCATCTCACTAGTAAGTGGGAGAGCTaGGATCTGAACCTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: RPPFRKNLLGAFLMHHLTSKWES*DLNLGL
Trigger: TAGACCCAGGTTCAGATCGCAGCTCTCCCACTTACT...AGTGAGATGATGCATGAGGAATGCACCCAGCAGATTCTTCCGAAATGGTGGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp ACAAAAACGCCCACCATTTCGGAAGAATCTGCTGGGTGCATTCCTCATGCATCAGGCTGCCGTTTACACTaGAAAGTCACCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TKTPTISEESAGCIPHASGCRLH*KVTWAL
Trigger: GAGAGCCCAGGTGACTTTGCAGTGTAAACGGCAGCC...TGATGCATGAGGAATGCACCCAGCAGATTCTTCCGAAATGGTGGGCGTTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCTCCAGGTTTCCAATCTaGCCCAAGTTGAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: GECAKFFSSVSKEVGVILSRFPI*PKLRYP
Trigger: CGGGTACCTCAACTTGGGCCAGATTGGAAACCTGGA...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAATGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GECAKFFSSVSKEVGVILFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: RLAQRRALRGIESSGLALAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGTTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKVYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAAC...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCGTTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: WAGTSRVVHQWGVSTLLFVYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAAC...GAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCATCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: GFSDYRQCKGCMLSATWASLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: WSSVPLQYFTEITKALVQSLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATCTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYLRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGTTCGAAAATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: CSKIKHTYLFWGEPGCQNGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...ATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATTTTCGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: WTSKGSQSSKCGGFGHLSSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...GGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGAGCACTGGTCTGCATTaGGGCCATCACAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWSTGLH*GHHSLC
Trigger: ACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCT...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAAGCACTGGTCTGCATTaGGGCCATCACAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKSTGLH*GHHSLC
Trigger: ACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCT...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKTQFKH*SALGPS
Trigger: TGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGT...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACGCACTTTTTACAGCTTaGGTGGCATTTAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYALFTA*VAFKAI
Trigger: AATTGCCTTAAATGCCACCCAAGCTGTAAAAAGTGC...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCGCACTTTTTACAGCTTaGGTGGCATTTAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: CLAIGVPFGWPQNASCCLALFTA*VAFKAI
Trigger: AATTGCCTTAAATGCCACCCAAGCTGTAAAAAGTGC...GAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCACACACTTCCAGTCGTaGAAGTGGAAGTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNATHFQS*KWKFFA
Trigger: TGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGT...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp AGGCTAACGTGGTCTGAAGGGGTCTCTTTGCCCAGTGACATTCTGGGGTTGGGAACACACTTCCAGTCGTaGAAGTGGAAGTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: RLTWSEGVSLPSDILGLGTHFQS*KWKFFA
Trigger: TGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGT...TCCCAACCCCAGAATGTCACTGGGCAAAGAGACCCCTTCAGACCACGTTAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCCTTCGACACACTTTGTaGGGCAAGCCCGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSLRHTL*GKPGIS
Trigger: AGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAG...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCCAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGA +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSQSGGR*TDGWMG
Trigger: TCCCATCCATCCATCCGTCCACCTTCCTCCAGACTG...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCAGTTTGTCGGAAGACTaGAGCCAACAAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNASLSED*SQQAAF
Trigger: AAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACT...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QTEHGNKESSACSKESAADSVNL*SQKLLQ
Trigger: TTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATC...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTGAGCAGGTAGACTGCTaGCCCTTTGTCACATGTGAG +
Preference number: 4 (lower is better)
Translates to: RGYHHFRNTSLRATTHLAEQVDC*PFVTCE
Trigger: CTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTC...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGATACTCCGGCCCCAGTaGTCATACATTTTATGCCCT +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGILRPQ*SYILCP
Trigger: AGGGCATAAAATGTATGACCACTGGGGCCGGAGTAT...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGGGAGCAGGACAATATaGAGAAAGACGAGGTCGAAA +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGGSRTI*RKTRSK
Trigger: TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCC...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGGGAGCAGGACAATATaGAGAAAGACGAGGTCGAAA +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGGSRTI*RKTRSK
Trigger: TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCC...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTGGGAGCAGGACAATATaGAGAAAGACGAGGTCGAAA +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPGSRTI*RKTRSK
Trigger: TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCC...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GCCCAAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAGTGCACAGCAGCAGTTaGTTGCATTTCTCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: AQAYLIPKTEGKSGKGVSVHSSS*LHFSPR
Trigger: TCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCAC...TGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp CAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGAGACTCCTGAAGCAGGCTCCTGTGCCATaGGATGTTAACTCTTTTATT +
Preference number: 4 (lower is better)
Translates to: QKALHQVEVVVQAMRLLKQAPVP*DVNSFI
Trigger: AATAAAAGAGTTAACATCCCATGGCACAGGAGCCTG...CTTCAGGAGTCTCATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp ATTTTTAGAGGAATGATAAGAGCTCAGGGTATGGGGCATGCTGATGGAGAAGGAGGGCTGTGCCTGGCATaGCCTGTGACTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: IFRGMIRAQGMGHADGEGGLCLA*PVTPGE
Trigger: TTCTCCAGGAGTCACAGGCCATGCCAGGCACAGCCC...TCCTTCTCCATCAGCATGCCCCATACCCTGAGCTCTTATCATTCCTCTAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR CAA 72 bp CCAGTTTTACCTGGAAGATGCTGGAGGTCTTGTCATTaGTCCCATCAACTGGAGAAGGCGGCCATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PVLPGRCWRSCH*SHQLEKAAMER
Trigger: TCTCTCCATGGCCGCCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTCCAGGTAAAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp TACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGCTCACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: YLIPKTEGKSGKGVSRELTKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...GAGCTCTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCAGGGGCCAGGTCAGGGTaGTTTCTCTCTATGCCATCA +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISGARSG*FLSMPS
Trigger: TGATGGCATAGAGAGAAATCACCCTGACCTGGCCCC...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGGGGGCCAGGTCAGGGTaGTTTCTCTCTATGCCATCA +
Preference number: 4 (lower is better)
Translates to: KRTSFLKLRANLGKGFQEGARSG*FLSMPS
Trigger: TGATGGCATAGAGAGAAATCACCCTGACCTGGCCCC...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp GGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCCTCGACCACATCTGTaGCATCGCCGTCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: GHLSLCSISQRLPKLLFNPRPHL*HRRPAC
Trigger: GCATGCTGGACGGCGATGTCACAGATGTGGTCGAGG...ATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR TCA 90 bp AAGAAAGAACAAGTTATACATGCAGCACAGTTAGGACTCTGTGAAATGTCAGGGCCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: KKEQVIHAAQLGLCEMSGPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...CCCTGACATTTCACAGAGTCCTAACTGTGCTGCATGTATAACTTGTTCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp GGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATCCACATGGGGGCAGAGACTaGGGTCCCAGTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: GQVLYYFIYMKCPGEANPHGGRD*GPSVAI
Trigger: GATGGCCACACTGGGACCTCAGTCTCTGCCCCCATG...TGGATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTCATGGGGGCAGAGACTaGGGTCCCAGTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSHGGRD*GPSVAI
Trigger: GATGGCCACACTGGGACCTCAGTCTCTGCCCCCATG...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTCTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: KLMVPEAAPKPELWIPRILFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TTTGATTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTCTCCAGCTCTGGGGCTaGGAGCTCCAGCATCCGCGA +
Preference number: 4 (lower is better)
Translates to: FDSISFGRNFSTSALLTFLQLWG*ELQHPR
Trigger: TCGCGGATGCTGGAGCTCTCAGCCCCAGAGCTGGAG...AAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR TCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACGGCAGCAGAACTGAATaGAGAGCTTCCGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNGSRTE*RASVRT
Trigger: TGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCC...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTATGGGAAGTGATGGATaGTTAACAATGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPMGSDG*LTMHGW
Trigger: CCAGCCATGCATTGTTAATCATCCATCACTTCCCAT...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACTCTCCAGCTCACAGGTaGCAAGGCAAATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNSPAHR*QGKCTV
Trigger: GACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGA...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTTCTCCAGCTCACAGGTaGCAAGGCAAATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: KLMVPEAAPKPELWIPRISPAHR*QGKCTV
Trigger: GACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGA...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ATCCTCGTAAGAACAGGACATTGCCACATTCCAGAAGCCCTCCTCCTGTCTTCAAACATGAGGTTCAAGTaGTTCTCGTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ILVRTGHCHIPEALLLSSNMRFK*FSCLSL
Trigger: GAGGCTGAGGCACGAGAATCACTTGAACCTCATGTT...TGAAGACAGGAGGAGGGCTTCTGGAATGTGGCAATGTCCTGTTCTTACGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR TCA 90 bp ACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGTGAAAGCTTCCACATCATaGGGCAAGGAGACTGAGGAA +
Preference number: 4 (lower is better)
Translates to: TFWSGQFFVMGAAVHCRVKASTS*GKETEE
Trigger: TTCCTCAGTCTCCTTGCCTCATGATGTGGAAGCTTT...CACCCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAAGTTGAGGTACCCGTaGGCCGCCGCCACGCGGTCC +
Preference number: 4 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILKLRYP*AAATRS
Trigger: GGACCGCGTGGCGGCGGCGCACGGGTACCTCAACTT...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGCGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp AGTAAGTGGGAGAGCTGCGATCTGAACCTGGGTCTATCCAGCATTACTCATGCCATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKWESCDLNLGLSSITHAMGHNH*RSRRSW
Trigger: CCAGCTACGACGTGAACGGCAATGATTATGACCCAT...GGCATGAGTAATGCTGGATAGACCCAGGTTCAGATCGCAGCTCTCCCACTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTTGGCATTGTACGCTATaGCCACGATGCAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFWHCTL*PRCSRN
Trigger: ATTCCTACTGCATCGTGGGCATAGCGTACAATGCCA...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GCCCAAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCACGTCCAGCATGCGGATaGCTCCTATTTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: AQAYLIPKTEGKSGKGVSRPACG*LLFWHC
Trigger: ACAATGCCAAAATAGGAGGCATCCGCATGCTGGACG...TGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCAGATGCCCAGCGACTTTaGCTCGACCACATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISDAQRL*LDHICD
Trigger: GTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATC...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTATGGAGCCCAGGCCCTaGCGGCCCTTTTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLMEPRP*RPFLMP
Trigger: TGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCAT...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCATGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPCCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAACTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: NVVALVICPSAVFHRDYQLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp CTATTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAG +
Preference number: 4 (lower is better)
Translates to: LLTFWSGQFFVMGAAVHCVVRVL*CAIQYE
Trigger: CTCATACTGTATGGCACAGCAGAGCACCCGTACCAC...GCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR GCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCGCTCACAGTCAGGAATaGAGCTGCCCCGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRAAHSQE*SCPVQG
Trigger: GCCTTGCACGGGGCAGCTGCATTCCTGACTGTGAGC...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGCTGAGTCAAAGTAGGTaGCTGGCTCACAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWLSQSR*LAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAG...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp ACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAAACTGTTTGGAGAGTGTaGCAAGTTCTTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: TYLFWGEPGCQNAEPCRQTVWRV*QVLQLC
Trigger: ACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGT...TTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACACAGAATGCCGAACCATaGAGGCAACAGGAATGCCCA +
Preference number: 4 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTQNAEP*RQQECP
Trigger: TGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTG...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACCACTTATTCCTTCACTaGCTCACACGCACAACTCTG +
Preference number: 4 (lower is better)
Translates to: HLGSLQLTGDKANALSSNHLFLH*LTRTTL
Trigger: CAGAGTTGTGCGTGTGAGGCAGTGAAGGAATAAGTG...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp CACCTGGGCTCTCCGGACCCCACTGCCTCCACTTGCAAAATGACAGTGACACAACGTACTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: HLGSPDPTASTCKMTVTQRTYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAGTACG...TTGTGTCACTGTCATTTTGCAAGTGGAGGCAGTGGGGTCCGGAGAGCCCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp AATATTTTTAGAGGAATGATAAGAGCTCAGGGTATGGGGCATGCTGATGGAGAACACAGAAGCTGGCCGTaGCTGAAGGGCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NIFRGMIRAQGMGHADGEHRSWP*LKGCAW
Trigger: CCAGGCACAGCCCTTCAGGCACGGCCAGCTTCTGTG...TTCTCCATCAGCATGCCCCATACCCTGAGCTCTTATCATTCCTCTAAAAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGTGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VYGDCLESVPSSSALFPRWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTTGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTGTAGGAATCATAATTTaGGGCCAGGTCAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPVGIII*GQVRVI
Trigger: AATCACCCTGACCTGGCCCCAAATTATGATTCCTAC...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp ATCTGCTGGGTGCATTCCTCATGCATCATCTCACTGACCCCTCCTGTGACCCTGGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: ICWVHSSCIISLTPPVTLAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...CAGGGTCACAGGAGGGGTCAGTGAGATGATGCATGAGGAATGCACCCAGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCGTCCGGCCCCCAGCTaGCACTGTAAATGTCGATGT +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSRPAPS*HCKCRC
Trigger: ACATCGACATTTACAGTGCCAGCTGGGGGCCGGACG...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp AGGCAAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: RQIQRNGKWIRGCQELGGTHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...CCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp GCCCAAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: AQAYLIPKTEGKSGKGVSTHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...TGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPTHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKTHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATCTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANLRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGGCAAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: RQIQRNGKWIRGCQELGGPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...CCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: RGYHHFRNTSLRATTHLAWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: GECAKFFSSVSKEVGVILVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCTCAGGAACTTCCACCTaGGAGGGTGACAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FHFFWPEFLNLGTIDILVSGTST*EGDRAA
Trigger: GGCTGCCCTGTCACCCTCCCAGGTGGAAGTTCCTGA...GACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCTCAGGAACTTCCACCTaGGAGGGTGACAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRASGTST*EGDRAA
Trigger: GGCTGCCCTGTCACCCTCCCAGGTGGAAGTTCCTGA...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCGCACTTTTTACAGCTTaGGTGGCATTTAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: DYRQCKGCMLSATWAGTSALFTA*VAFKAI
Trigger: AATTGCCTTAAATGCCACCCAAGCTGTAAAAAGTGC...GGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCAGGAAGGTGGACGGATaGATGGATGGGAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSRKVDG*MDGSAC
Trigger: GCAGGCACTCCCATCCATCCATCCGTCCACCTTCCT...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCACAGTCTGGAGGAAGGTaGACGGATGGATGGATGGGA +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISQSGGR*TDGWMG
Trigger: TCCCATCCATCCATCCGTCCACCTTCCTCCAGACTG...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGAGTTTGTCGGAAGACTaGAGCCAACAAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGSLSED*SQQAAF
Trigger: AAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACT...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCATTAACAATGCATGGCTaGCTTTACATTTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKALTMHG*LYILFR
Trigger: TCTGAACAAAATGTAAAGCCAGCCATGCATTGTTAA...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTAACAATGCATGGCTaGCTTTACATTTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGLTMHG*LYILFR
Trigger: TCTGAACAAAATGTAAAGCCAGCCATGCATTGTTAA...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGTTAACAATGCATGGCTaGCTTTACATTTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARLTMHG*LYILFR
Trigger: TCTGAACAAAATGTAAAGCCAGCCATGCATTGTTAA...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACACACACTTATCTATTCTaGGGCGAACCTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTHTYLF*GEPGCQ
Trigger: CTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTG...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCAGGGGCCCCTACATCTaGAGAGGCTCTAGAACCTCC +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSRGPYI*RGSRTS
Trigger: GGAGGTTCTAGAGCCTCTCCAGATGTAGGGGCCCCT...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp ACTGCTGTCTTCACACAGCAGGTCATGGAGACGGTTAGACTTAAGGGTTTCTCTTCCAATCCAGCAGATTaGCTCCTCGCTCCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: TAVFTQQVMETVRLKGFSSNPAD*LLAPSE
Trigger: TTCGGAAGGAGCGAGGAGCCAATCTGCTGGATTGGA...AGAGAAACCCTTAAGTCTAACCGTCTCCATGACCTGCTGTGTGAAGACAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp CTGCCGTTTACACTGCAAAGTCACCTGGGCTCTCCGGACCCCACTGCCTCCACTATATTTCAAGAAAGTTaGAAACAGGAACGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LPFTLQSHLGSPDPTASTIFQES*KQERCL
Trigger: CAGACATCGTTCCTGTTTCCAACTTTCTTGAAATAT...AGTGGAGGCAGTGGGGTCCGGAGAGCCCAGGTGACTTTGCAGTGTAAACGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR CAA 72 bp TCTGAAGGGGTCTCTTTGCCCAGTGACATTCTGGGGTaGGGATCTGGGATTTCCTCCATTGCTTCCTTACAT +
Preference number: 4 (lower is better)
Translates to: SEGVSLPSDILG*GSGISSIASLH
Trigger: ATGTAAGGAAGCAATGGAGGAAATCCCAGATCCCAACCCCAGAATGTCACTGGGCAAAGAGACCCCTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCCCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KTILRKNHQVGGLALSYFPGGPF*GRCEGL
Trigger: GAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGG...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAGGGGCCAGGTCAGGGTaGTTTCTCTCTATGCCATCA +
Preference number: 4 (lower is better)
Translates to: NVVALVICPSAVFHRDYQGARSG*FLSMPS
Trigger: TGATGGCATAGAGAGAAATCACCCTGACCTGGCCCC...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR TCA 90 bp GGAGCCAACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAGGGGCCAGGTCAGGGTaGTTTCTCTCTATGCCATCA +
Preference number: 4 (lower is better)
Translates to: GANKQHLRGYHHFRNTSLGARSG*FLSMPS
Trigger: TGATGGCATAGAGAGAAATCACCCTGACCTGGCCCC...TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGGTAGGAATTGTTTGCTaGAGCAGCAACTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VYGDCLESVPSSSALFPRVGIVC*SSNFSR
Trigger: GCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTAC...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCGATGTAGTTGGGTCTaGTGCCCAGCGACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSRCSWV*CPATLP
Trigger: AGGCAAAGTCGCTGGGCATCAGACCCAACTACATCG...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGCGATGTAGTTGGGTCTaGTGCCCAGCGACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKRCSWV*CPATLP
Trigger: AGGCAAAGTCGCTGGGCATCAGACCCAACTACATCG...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp GATGAAAACATTCTGGAATTAGATAGTGCTGACGTTTACATGACATCGTGGATGCCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: DENILELDSADVYMTSWMPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...CATCCACGATGTCATGTAAACGTCAGCACTATCTAATTCCAGAATGTTTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGCCATCGGTACAGCGCTaGCGCAGATCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: LQIHMELHGTQNSQNNLEPSVQR*RRSVVT
Trigger: CGTCACCACGGATCTGCGTCAGCGCTGTACCGATGG...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACCATGGGGGCAGAGACTaGGGTCCCAGTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYHGGRD*GPSVAI
Trigger: GATGGCCACACTGGGACCTCAGTCTCTGCCCCCATG...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACCATGGGGGCAGAGACTaGGGTCCCAGTGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNHGGRD*GPSVAI
Trigger: GATGGCCACACTGGGACCTCAGTCTCTGCCCCCATG...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYSSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TTTGATTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTATCCGCGAGCGGGACTaGTGGGCACTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: FDSISFGRNFSTSALLTFIRERD*WALKVW
Trigger: CCACACCTTCAGTGCCCATCAGTCCCGCTCGCGGAT...AAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR TCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAGAGAAGAGTGATGTGTaGTGCCAAGCGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPEKSDV*CQAPFF
Trigger: AAAGAAAGGCGCTTGGCATCACACATCACTCTTCTC...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGGCACGGGGAGAAGAGTaGTGTGTGATGCCAAGCGCC +
Preference number: 4 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGARGEE*CVMPSA
Trigger: GGCGCTTGGCATCACACATCACTCTTCTCCCCGTGC...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp ACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACCAAGGAAGTGGGAGTaGTACTCTATAATTGCACTT +
Preference number: 4 (lower is better)
Translates to: TYLFWGEPGCQNAEPCRQPRKWE*YSIIAL
Trigger: AAGTGCAATTATAGAGTATCACTCCCACTTCCTTGG...TTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTACTGTCACGGCCCCGTaGAAGAGAAAAGGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: LPKAAKVLNVVALVICPSTVTAP*KRKGGK
Trigger: TTTACCTCCTTTTCTCTTTCACGGGGCCGTGACAGT...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGACCAGGAGTTTATTTCTaGTTCAGCTGCAAACATGGT +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGPGVYF*FSCKHG
Trigger: ACCATGTTTGCAGCTGAATCAGAAATAAACTCCTGG...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp GTCATCTTTTTGTTATGCTTTCTACTGGAGATACAGAACCGACTAAACAATACTGGGCCGCCCAGCACTTaGACCGCCCAGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VIFLLCFLLEIQNRLNNTGPPST*TAQWLV
Trigger: CACCAACCACTGGGCGGTGCAAGTGCTGGGCGGCCC...AGTATTGTTTAGTCGGTTCTGTATCTCCAGTAGAAAGCATAACAAAAAGATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPRCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGYHHFRNTSLRATTHLAMGHNH*RSRRSW
Trigger: CCAGCTACGACGTGAACGGCAATGATTATGACCCAT...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCCTCCCGCACAACGAGTaGCGTGTTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: GECAKFFSSVSKEVGVILLPHNE*RVYFHC
Trigger: GCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGACGCTATGCCCACGATaGAGTAGGAATTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KQHLGSLQLTGDKANALSTLCPR*SRNCLL
Trigger: CAGCAAACAATTCCTACTGCATCGTGGGCATAGCGT...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACCGGAACACGTGTGATGCCCAGCGACTTTaGCTCGACCACATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VFHRDYQSSCSICHRNTCDAQRL*LDHICD
Trigger: GTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATC...ACACGTGTTCCGGTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGCACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: VYGDCLESVPSSSALFPRHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACATGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTCCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp GGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATCCAGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GQVLYYFIYMKCPGEANPAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...TGGATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTGTCTCAAGATCACCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLVSRSP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGAC...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCCGGCAAGACAGGCACTaGGTCGCAGCTCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSRQDRH*VAALLE
Trigger: CTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCG...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCAATGCAGCTGCCCCGTaGAAGGCTGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSNAAAP*KAESFF
Trigger: AAAGAAGGATTCAGCCTTGCACGGGGCAGCTGCATT...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGAATGCACTCTTCTCTaGCTGGCCCCACGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKECTLL*LAPRRF
Trigger: GAACCTGCGTGGGGCCAGGCAGAGAAGAGTGCATTC...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
CDS-3UTR GCA 90 bp CAAGTGTCCAAATATGTGAGGGCCTCTGCTTCTGAACTAGCTGTTCTTTTCCATAGCCCGTCTTACACCTaGTACAGTTCCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QVSKYVRASASELAVLFHSPSYT*YSSCWS
Trigger: GCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCT...ATGGAAAAGAACAGCTAGTTCAGAAGCAGAGGCCCTCACATATTTGGACACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSLGAQR*CSWGDK
Trigger: TTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAA...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 4 (lower is better)
Translates to: KLMVPEAAPKPELWIPRINEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAATGCCCAAGCGTACCTCGGTAAAGAGATTGACTaGAATATTAATGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: LAARMPNHAGNRNAQAYLGKEID*NINANG
Trigger: CCCATTTGCATTAATATTGCAGTCAATCTCTTTACC...GAGGTACGCTTGGGCATTCCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCACAGCAGCAGTTGGTTaGATTTCTCCCCGAGATAAG +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPTAAVG*ISPRDK
Trigger: CTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGT...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGTGCAGGCAACAGGAATaGCCAAGCGTACCTCATTCC +
Preference number: 4 (lower is better)
Translates to: KRTSFLKLRANLGKGFQECRQQE*PSVPHS
Trigger: GGAATGAGGTACGCTTGGGCATTCCTGTTGCCTGCA...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp GAACCTGGGTCTATCCAGCATTACTCATGCCCCTTCCACCTCATTCCTAAGGTCTCAAACAGACCAAACTaGTGTCTTCACACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: EPGSIQHYSCPFHLIPKVSNRPN*CLHTAG
Trigger: ACCTGCTGTGTGAAGACAGCAGTTTGGTCTGTTTGA...GACCTTAGGAATGAGGTGGAAGGGGCATGAGTAATGCTGGATAGACCCAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCATGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATCTCTTCCACGCTGCCTaGACATTCATTTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYLFHAA*TFISDR
Trigger: CCGGTCGGAAATGAATGTCCAGGCAGCGTGGAAGAG...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAACTCTTCCACGCTGCCTaGACATTCATTTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: NVVALVICPSAVFHRDYQLFHAA*TFISDR
Trigger: CCGGTCGGAAATGAATGTCCAGGCAGCGTGGAAGAG...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGTTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: PQNASCCLSSEGSASGRGVYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAAC...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAGGATGCCTCCTATTTTaGCATTGTACGCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKGCLLF*HCTLCP
Trigger: TGGGCATAGCGTACAATGCCAAAATAGGAGGCATCC...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCTCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: KTILRKNHQVGGLALSYFSLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp CACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCCTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: HKRPGVVLFHLYEMSRRGLRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...GCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTCTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSLRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: WTSKGSQSSKCGGFGHLSWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...GGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CCGCAGAAAAGCACGGGGAGAAGAGTGATGTGTGATGCCAAGCGCCTTTCTTTTAATATTAGCAGAGCCTaGGGTGGATTGAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PQKSTGRRVMCDAKRLSFNISRA*GGLSCV
Trigger: TACACAGCTCAATCCACCCCAGGCTCTGCTAATATT...AAAAGAAAGGCGCTTGGCATCACACATCACTCTTCTCCCCGTGCTTTTCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000677364.1
CDS-3UTR CCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATCTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANLPRLK*TQFKHW
Trigger: CCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAG...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANTTHLA*VLRDAA
Trigger: AGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGT...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGATTCAGTAAACTTATaGTCCCAGAAGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GSLQLTGDKANALSSNRGDSVNL*SQKLLQ
Trigger: TTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATC...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AAATGCCTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTACCAGGGTTCGCCAGCTaGGCCGGGGAGATTTACTAC +
Preference number: 4 (lower is better)
Translates to: KCLHRFGRINPTVSCRLVPGFAS*AGEIYY
Trigger: GTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGG...TACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAGGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAATACTCCGGCCCCAGTaGTCATACATTTTATGCCCT +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPILRPQ*SYILCP
Trigger: AGGGCATAAAATGTATGACCACTGGGGCCGGAGTAT...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCATTCAGAGGAATTGCTTaGCCATCGGGGTACCTTTTG +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPFRGIA*PSGYLL
Trigger: CAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAATTCAGAGGAATTGCTTaGCCATCGGGGTACCTTTTG +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKFRGIA*PSGYLL
Trigger: CAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACATTAACAATGCATGGCTaGCTTTACATTTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTLTMHG*LYILFR
Trigger: TCTGAACAAAATGTAAAGCCAGCCATGCATTGTTAA...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTGGATTTGCTGGTATCTaGGCTCTAGGGTCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: RGYHHFRNTSLRATTHLAGFAGI*ALGSKR
Trigger: CCTTTTAGACCCTAGAGCCCAGATACCAGCAAATCC...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACAATCTGGCCCAAGTTaGGGTACCCGTGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPQSGPS*GTRAPP
Trigger: CGGCGGCGCACGGGTACCTCAACTTGGGCCAGATTG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKTKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACCCTCGACCACATCTGTaGCATCGCCGTCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNPRPHL*HRRPAC
Trigger: GCATGCTGGACGGCGATGTCACAGATGTGGTCGAGG...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAACTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: NVVALVICPSAVFHRDYQLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR TCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGTGCGGCAGCAGAACTaGATGAAGAGCTTCCGTTCG +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANVRQQN*MKSFRS
Trigger: CGAACGGAAGCTCTTCATTCAGTTCTGCTGCCGCAC...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGTCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTTTTTCGAGTACGCTGTaGGAAACTTTTGCCTACTCC +
Preference number: 4 (lower is better)
Translates to: CLHLVTTLAPRVTIILPSFSSTL*ETFAYS
Trigger: GGAGTAGGCAAAAGTTTCTCACAGCGTACTCGAAAA...AGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR TCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCATCAACAACTGTTTGTaGGCCATGTCCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPINNCL*AMSKVL
Trigger: CAGCACTTTGGACATGGCTCACAAACAGTTGTTGAT...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGAGCTGTTGGGTTGTGTaGCTTGCCCTGCCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKSCWVV*LALPSE
Trigger: CTCAGAAGGCAGGGCAAGTCACACAACCCAACAGCT...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp TTTAGAGGAATGATAAGAGCTCAGGGTATGGGGCATGCTGATGGAGAAGGAAAGAAAAGCTCAGGCACGTaGCCTGTGTGCTCAAACAGA +
Preference number: 4 (lower is better)
Translates to: FRGMIRAQGMGHADGEGKKSSGT*PVCSNR
Trigger: TCTGTTTGAGCACACAGGTCACGTGCCTGAGCTTTT...CTTTCCTTCTCCATCAGCATGCCCCATACCCTGAGCTCTTATCATTCCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCACGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp TTGCAAAATGACAGTGACACAAAAACGCCCACCATTTCGGAAGAATCTGCTGGGCGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LQNDSDTKTPTISEESAGRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...CCCAGCAGATTCTTCCGAAATGGTGGGCGTTTTTGTGTCACTGTCATTTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR GCA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCGCCCCTCTTCCACGCTaGCTGGACATTCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFAPLPR*LDIHFR
Trigger: TCGGAAATGAATGTCCAGGCAGCGTGGAAGAGGGGC...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGMGHNH*RSRRSW
Trigger: CCAGCTACGACGTGAACGGCAATGATTATGACCCAT...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACACGCTATGCCCACGATaGAGTAGGAATTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNTLCPR*SRNCLL
Trigger: CAGCAAACAATTCCTACTGCATCGTGGGCATAGCGT...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCACGTCCAGCATGCGGATaGCTCCTATTTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISRPACG*LLFWHC
Trigger: ACAATGCCAAAATAGGAGGCATCCGCATGCTGGACG...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp GGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCATCGCCGTCCAGCATaGGGATGCCTCCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: GHLSLCSISQRLPKLLFNHRRPA*GCLLFW
Trigger: CCAAAATAGGAGGCATCCGCATGCTGGACGGCGATG...ATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp GCCAGACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGCCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: ARHKRPGVVLFHLYEMSRPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...CCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp AGGCAAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: RQIQRNGKWIRGCQELGGIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...CCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp TACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGCTCATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: YLIPKTEGKSGKGVSRELISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...GAGCTCTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp TGCACTCTTCTCTGCCTGGCCCTTGTTTTGCCCTTGCATTTTAATGCTGCAATAATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: CTLLCLALVLPLHFNAAIISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...TATTGCAGCATTAAAATGCAAGGGCAAAACAAGGGCCAGGCAGAGAAGAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAG +
Preference number: 4 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYVVRVL*CAIQYE
Trigger: CTCATACTGTATGGCACAGCAGAGCACCCGTACCAC...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRAVQALV*IGAITA
Trigger: GGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAAC...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGATCAGCATAAAATCCTaGAGGACAGAGGGTCACACA +
Preference number: 4 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWISIKS*RTEGHT
Trigger: TGTGTGACCCTCTGTCCTGCAGGATTTTATGCTGAT...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR GCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKVPAGA*TAQAVL
Trigger: GAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAAC...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CTATTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCTCTAGTCACCACCCTTaGCCCAAGGGTAACCATTAT +
Preference number: 4 (lower is better)
Translates to: LLTFWSGQFFVMGAAVHCSSHHP*PKGNHY
Trigger: ATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGA...GCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCATGTTTCATTTTGTGTaGCGTGGAAAGAAATACAGG +
Preference number: 4 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAMFHFV*RGKKYR
Trigger: CCTGTATTTCTTTCCACGGCACACAAAATGAAACAT...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR GCA 90 bp AAATGCCTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAAGAGAAGGGCAGTGCTaGCGTACAGAGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KCLHRFGRINPTVSCRLVREGQC*RTERVQ
Trigger: CTGGACCCTCTCTGTACGGCAGCACTGCCCTTCTCT...TACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp GGAGCCAACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTATTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GANKQHLRGYHHFRNTSLFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTCTTCCACGCTGCCTaGACATTCATTTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFLFHAA*TFISDR
Trigger: CCGGTCGGAAATGAATGTCCAGGCAGCGTGGAAGAG...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp ATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCACGTTCACGTCGTAGCTaGCGTAGGAATCATAATTTG +
Preference number: 4 (lower is better)
Translates to: IKHTYLFWGEPGCQNAEPRSRRS*RRNHNL
Trigger: CAAATTATGATTCCTACGCCAGCTACGACGTGAACG...TGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp CACTGGCCTGGACGAGCCTCTAAGACACTAAGACATGAAGTTTCAACCAGCTCACGTTCACGTCGTAGCTaGCGTAGGAATCATAATTTG +
Preference number: 4 (lower is better)
Translates to: HWPGRASKTLRHEVSTSSRSRRS*RRNHNL
Trigger: CAAATTATGATTCCTACGCCAGCTACGACGTGAACG...TGAGCTGGTTGAAACTTCATGTCTTAGTGTCTTAGAGGCTCGTCCAGGCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TGTTCGAAAATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATTTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: CSKIKHTYLFWGEPGCQNFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...ATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATTTTCGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGTTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATCCAAAGTCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: QVLYYFIYMKCPGEANPKSLAFR*AGRDVF
Trigger: GAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA...CTTTGGATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACCTAAGGGGATGCTCCTaGGTCTCTTGTCCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNLRGCS*VSCPRR
Trigger: CCGCCTCGGACAAGAGACCCAGGAGCATCCCCTTAG...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCTTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: SISFGRNFSTSALLTFWSSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...AGACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CCA 90 bp TTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGAATATTAGCAGAGCCTaGGGTGGATTGAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LTFWSGQFFVMGAAVHCRNISRA*GGLSCV
Trigger: TACACAGCTCAATCCACCCCAGGCTCTGCTAATATT...CCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCATCACCACACTCCGGATaGCACACACTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISSPHSG*HTLVCK
Trigger: TTTACAGACCAGTGTGTGCCATCCGGAGTGTGGTGA...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000677364.1
CDS-3UTR CCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSTQFKH*SALGPS
Trigger: TGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGT...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCGTTCGCACAGCCGGTTaGACTTCACCATCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRAVRTAG*TSPSRR
Trigger: TCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGACCACCCACCTGGCTTaGGTGCTCAGAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGTTHLA*VLRDAA
Trigger: AGCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGT...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACCCAGGGTTCGCCAGCTaGGCCGGGGAGATTTACTAC +
Preference number: 4 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYPGFAS*AGEIYY
Trigger: GTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGG...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGGGGTACCTTTTGGCTaGCCACAGAATGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANGVPFG*PQNASC
Trigger: ACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCC...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCCATCGGGGTACCTTTTaGCTGGCCACAGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRAHRGTF*LATECL
Trigger: GAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATG...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGTGGATCTGCAGTCTCTCTaGCCTAGATTTTTGTGCATA +
Preference number: 4 (lower is better)
Translates to: TFWSGQFFVMGAAVHCRVDLQSL*PRFLCI
Trigger: TATGCACAAAAATCTAGGCCAGAGAGACTGCAGATC...CACCCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTGTGCACAGCAGCAGTTaGTTGCATTTCTCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLVHSSS*LHFSPR
Trigger: TCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCAC...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACTGGAGAAGGCGGCCATaGAGAGAAGGGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYWRRRP*REGQCC
Trigger: GCAGCACTGCCCTTCTCTCCATGGCCGCCTTCTCCA...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp AAATGCCTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: KCLHRFGRINPTVSCRLVTKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...TACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR TCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCATCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCAC +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPSSAWV*DGGANH
Trigger: GTGGTTCGCACCTCCATCTCACACCCACGCCGAGGA...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCGGCAGCAGAACTGAATaGAGAGCTTCCGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRAGSRTE*RASVRT
Trigger: TGTGCGAACGGAAGCTCTTCATTCAGTTCTGCTGCC...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACATGGGAAGTGATGGATaGTTAACAATGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNMGSDG*LTMHGW
Trigger: CCAGCCATGCATTGTTAATCATCCATCACTTCCCAT...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCATTCCCAAGAGCCACTaGCCTTGCTTCTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: HKRPGVVLFHLYEMSRRGIPKSH*PCFSGL
Trigger: CAACCCGGAGAAGCAAGGTCAGTGGCTCTTGGGAAT...GCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp AGGCAAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGTGCTGACGTTTACATaGCATCGTGGATGTACTAAA +
Preference number: 4 (lower is better)
Translates to: RQIQRNGKWIRGCQELGGVLTFT*HRGCTK
Trigger: TTTAGTACATCCACGATGTCATGTAAACGTCAGCAC...CCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTAAGCACAGGATAGATTaGGCCATCGAACACAGATTG +
Preference number: 4 (lower is better)
Translates to: LPKAAKVLNVVALVICPSKHRID*AIEHRL
Trigger: CAATCTGTGTTCGATGGCTCAATCTATCCTGTGCTT...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGCAACAGTGTGTATGGTaGCTGTTTGGAGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKQQCVW*LFGECA
Trigger: GGCACACTCTCCAAACAGTCACCATACACACTGTTG...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp TGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACACTGTCACGGCCCCGTaGAAGAGAAAAGGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: CPSAVFHRDYQSSCSICHTVTAP*KRKGGK
Trigger: TTTACCTCCTTTTCTCTTTCACGGGGCCGTGACAGT...GTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR TCA 90 bp ATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGTAGAGACGTAGTTTaGACACGAAGTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: IKHTYLFWGEPGCQNAEPCRDVV*TRSVSG
Trigger: TCCAGAAACACTTCGTGTTCAAACTACGTCTCTACA...TGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR TCA 90 bp ATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCAACAGTTAGGACTCTGTaGAATGTCAGGGGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: IKHTYLFWGEPGCQNAEPTVRTL*NVRGEK
Trigger: TTTTTCTCCCCTGACATTTCACAGAGTCCTAACTGT...TGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: KRTSFLKLRANLGKGFQERCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGCGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCATGGAGCCCAGGCCCTaGCGGCCCTTTTTAATGCCA +
Preference number: 4 (lower is better)
Translates to: KTILRKNHQVGGLALSYFMEPRP*RPFLMP
Trigger: TGGCATTAAAAAGGGCCGGCAGGGCCTGGGCTCCAT...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp TGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACCACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: CPSAVFHRDYQSSCSICHHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...GTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACGCCACACACATGTGCTaGGATGGCACTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNATHMC*DGTAVH
Trigger: GTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGC...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCCCTGCACTAAGGGGATaGTCCTGGGTCTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: KTILRKNHQVGGLALSYFPALRG*SWVSCP
Trigger: CGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGG...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LQIHMELHGTQNSQNNLEGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp TCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCTTCTTTCAACTTCCCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: SISFGRNFSTSALLTFWSSFNFP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGA...AGACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR GCA 90 bp GGAGCCAACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTACTGAGTCAAAGTAGGTaGCTGGCTCACAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GANKQHLRGYHHFRNTSLLSQSR*LAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAG...TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGVPAGA*TAQAVL
Trigger: GAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAAC...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACGACTTTCTAAGCCACTaGTGCAGTTTCAGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNDFLSH*CSFRSS
Trigger: GCTACTTCTGAAACTGCAGCAGTGGCTTAGAAAGTC...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGCAGAATGCCTCCTGTTaGCTCTCCTCAGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKQNASC*LSSEGS
Trigger: AGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTG...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ATCCTCGTAAGAACAGGACATTGCCACATTCCAGAAGCCCTCCTCCTGTCTTCAACCTGCCCCGGTCACTaGAACTTTTGTTTAACTAAA +
Preference number: 4 (lower is better)
Translates to: ILVRTGHCHIPEALLLSSTCPGH*NFCLTK
Trigger: TTTAGTTAAACAAAAGTTGCAGTGACCGGGGCAGGT...TGAAGACAGGAGGAGGGCTTCTGGAATGTGGCAATGTCCTGTTCTTACGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp AAGTGTGTTTCTAAACCAGACCATTTTGCTAAGAACTTTATTGGGACAACTGGCGGAATCTCGGCTCACTaGAACCTCCGCCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: KCVSKPDHFAKNFIGTTGGISAH*NLRLMR
Trigger: CCTCATGAGGCGGAGGTTGCAGTGAGCCGAGATTCC...GCCAGTTGTCCCAATAAAGTTCTTAGCAAAATGGTCTGGTTTAGAAACACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp CAAGTGTCCAAATATGTGAGGGCCTCTGCTTCTGAACTAGCTGTTCTTTTCCATTCTCCCCCACTGCTCTaGAGAGCAGCTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: QVSKYVRASASELAVLFHSPPLL*RAALFK
Trigger: TTTGAAAAGAGCTGCTCTGCAGAGCAGTGGGGGAGA...ATGGAAAAGAACAGCTAGTTCAGAAGCAGAGGCCCTCACATATTTGGACACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp GCCAGACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAAGTGGATTAGAGGTTaGCAGGAGCTGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ARHKRPGVVLFHLYEMSRKWIRG*QELGGE
Trigger: CTCCCCTCCCAGCTCCTGGCAACCTCTAATCCACTT...CCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp GCCCAAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAGGCACAGAAGGCATGTaGTTTAAATCTGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AQAYLIPKTEGKSGKGVSGTEGM*FKSVFL
Trigger: AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCC...TGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTACTGTTTGGAGAGTGTaGCAAGTTCTTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LPKAAKVLNVVALVICPSTVWRV*QVLQLC
Trigger: ACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGT...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAGTTTTACCTGGAAGATaGTGGAGGTCTTGTCATTTG +
Preference number: 4 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKVLPGR*WRSCHL
Trigger: CAAATGACAAGACCTCCAGCATCTTCCAGGTAAAAC...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTGTTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPVYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAAC...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCCGTCCGGCCCCCAGCTaGCACTGTAAATGTCGATGT +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSRPAPS*HCKCRC
Trigger: ACATCGACATTTACAGTGCCAGCTGGGGGCCGGACG...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCAATGCCCAGACGAAAATaGAGCCCAGGCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPMPRRK*SPGPAG
Trigger: GCCGGCAGGGCCTGGGCTCCATTTTCGTCTGGGCAT...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp TGTTCGAAAATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATTCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: CSKIKHTYLFWGEPGCQNSLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...ATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATTTTCGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp TGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: CPSAVFHRDYQSSCSICHVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...GTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCTGGGCACTGAAGGTGTaGTACGGGTGCTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSWALKV*YGCSAV
Trigger: CACAGCAGAGCACCCGTACCACACCTTCAGTGCCCA...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATAGCACTGGTCTGCATTaGGGCCATCACAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANSTGLH*GHHSLC
Trigger: ACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCT...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKTQFKH*SALGPS
Trigger: TGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGT...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCGCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSALLHV*LVMQEV
Trigger: GACCTCCTGCATCACCAACCACACGTGCAGCAACGC...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCAGGAAGGTGGACGGATaGATGGATGGGAGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSRKVDG*MDGSAC
Trigger: GCAGGCACTCCCATCCATCCATCCGTCCACCTTCCT...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ATAGGAACAGGGACAGAAGTCAAACCATATGTGGTTTTATTCATTGAGGGTATCCCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: IGTGTEVKPYVVLFIEGIPLLHV*LVMQEV
Trigger: GACCTCCTGCATCACCAACCACACGTGCAGCAACGG...GATACCCTCAATGAATAAAACCACATATGGTTTGACTTCTGTCCCTGTTCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp TGGGCATATTATAGCCCTACATTTATTGAGGCACTCTTTAATTTCAGCAGCATCCAGGCTGGAGTACAGTaGCGGAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WAYYSPTFIEALFNFSSIQAGVQ*RNLGSL
Trigger: CAGTGAGCCGAGATTCCGCCACTGTACTCCAGCCTG...GATGCTGCTGAAATTAAAGAGTGCCTCAATAAATGTAGGGCTATAATATGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp GTGAAAGAAGCCAGACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAGAGGGGAGGAGGGAATaGGGAGTGGCTGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: VKEARHKRPGVVLFHLYEEGRRE*GVAASW
Trigger: CCATGAAGCAGCCACTCCCCATTCCCTCCTCCCCTC...TTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTCTGGCTTCTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTGTATGGTGACTGTTTaGAGAGTGTGCCAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: GLPKAAKVLNVVALVICPCMVTV*RVCQVL
Trigger: AAGAACTTGGCACACTCTCCAAACAGTCACCATACA...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGCTCAAACGAGGAGAGTTTTaGGGAAAGGCGTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: YLIPKTEGKSGKGVSRELKRGEF*GKASLS
Trigger: TGACAGTGACGCCTTTCCCCAAAACTCTCCTCGTTT...GAGCTCTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp CAAAGGATTCCTAGCAAGTACAAGCTTCTGACTTCACAGAGAGGCCATGGTAAAATTTGTCCCATCAACTaGAGAAGGCGGCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: QRIPSKYKLLTSQRGHGKICPIN*RRRPWR
Trigger: TCTCCATGGCCGCCTTCTCCAGTTGATGGGACAAAT...TTTACCATGGCCTCTCTGTGAAGTCAGAAGCTTGTACTTGCTAGGAATCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CAA 72 bp GTCCACTTAACACTTGGTCAGCACTCATGTTTCATTTaGTGTGCCGTGGAAAGAAATACAGGCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VHLTLGQHSCFI*CAVERNTGSCA
Trigger: GGCACAGGAGCCTGTATTTCTTTCCACGGCACACAAAATGAAACATGAGTGCTGACCAAGTGTTAAGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR TCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNTKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: NVVALVICPSAVFHRDYQKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR TCA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCCTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: HKRPGVVLFHLYEMSRRGLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...GCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTCTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACATCTGATCAGCTCTaGGTCAAAGTAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRATSDQL*VKVGAW
Trigger: CCAGGCACCTACTTTGACTCAGAGCTGATCAGATGT...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKGIPHI*SALSQS
Trigger: ACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCC...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCATCTTATTTATAGTCTaGCCAAACCGTCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSILFIV*PNRPQT
Trigger: AGTCTGGGGACGGTTTGGTCAGACTATAAATAAGAT...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAACAACAGTGTGTATGGTaGCTGTTTGGAGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: WSSVPLQYFTEITKALVQQQCVW*LFGECA
Trigger: GGCACACTCTCCAAACAGTCACCATACACACTGTTG...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCACGTGTTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPRVYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAACACG...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp TGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACACGCTATGCCCACGATaGAGTAGGAATTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: CPSAVFHRDYQSSCSICHTLCPR*SRNCLL
Trigger: CAGCAAACAATTCCTACTGCATCGTGGGCATAGCGT...GTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGTGGCATTGTACGCTATaGCCACGATGCAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEWHCTL*PRCSRN
Trigger: ATTCCTACTGCATCGTGGGCATAGCGTACAATGCCA...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAACGTCCAGCATGCGGATaGCTCCTATTTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: WSSVPLQYFTEITKALVQRPACG*LLFWHC
Trigger: ACAATGCCAAAATAGGAGGCATCCGCATGCTGGACG...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACCATCGCCGTCCAGCATaGGGATGCCTCCTATTTTGG +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNHRRPA*GCLLFW
Trigger: CCAAAATAGGAGGCATCCGCATGCTGGACGGCGATG...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCGATGCCCAGCGACTTTaGCTCGACCACATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: KTILRKNHQVGGLALSYFDAQRL*LDHICD
Trigger: GTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATC...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPPYSKA*LASRPG
Trigger: GCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp GATGAAAACATTCTGGAATTAGATAGTGCTGACGTTTACATGACATCGTGGATGGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: DENILELDSADVYMTSWMVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...CATCCACGATGTCATGTAAACGTCAGCACTATCTAATTCCAGAATGTTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNVLRWH*CPLLCL
Trigger: GAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCAC...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCAGCGGCCACACACATGTaGTGCGATGGCACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPAATHM*CDGTAV
Trigger: GACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGC...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILVVRST*TKGMLL
Trigger: CAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTAC...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp GTGAAAGAAGCCAGACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VKEARHKRPGVVLFHLYEGVRWR*EPPRAP
Trigger: TGGAGCACGTGGTGGTTCGCACCTCCATCTCACACC...TTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTCTGGCTTCTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp AAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KGQVLYYFIYMKCPGEANLASPG*GPGMAD
Trigger: ATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAG...ATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGAAGGTGTGGTACGGGTaGTCTGCTGTGCCATACAGT +
Preference number: 4 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGKVWYG*SAVPYS
Trigger: ACTGTATGGCACAGCAGAGCACCCGTACCACACCTT...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYVQALV*IGAITA
Trigger: GGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAAC...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCC +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSVQALV*IGAITA
Trigger: GGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAAC...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCCTGAGTCAAAGTAGGTaGCTGGCTCACAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRALSQSR*LAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAG...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATCTGAGTCAAAGTAGGTaGCTGGCTCACAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANLSQSR*LAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAG...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGTTTTCGCACAGTGAATaGACTCTTCTCTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKFSHSE*TLLCLA
Trigger: GGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAA...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR GCA 90 bp AAGTGTGTTTCTAAACCAGACCATTTTGCTAAGAACTTTATTGGGACAACTGGCGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KCVSKPDHFAKNFIGTTGVPAGA*TAQAVL
Trigger: GAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAAC...GCCAGTTGTCCCAATAAAGTTCTTAGCAAAATGGTCTGGTTTAGAAACACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGGGTGCTCAGAGATGCTaGTCCTGGGGAGATAAAGCT +
Preference number: 4 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGGAQRC*SWGDKA
Trigger: AGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACC...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCTTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRALGAQR*CSWGDK
Trigger: TTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAA...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATAACGAGCAGGTAGACTaGTGGCCCTTTGTCACATGT +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANNEQVD*WPFVTC
Trigger: ACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTT...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp GGAGCCAACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTATTTGTTCAGAGGAATTaGTTGGCCATCGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: GANKQHLRGYHHFRNTSLFVQRN*LAIGVP
Trigger: AGGTACCCCGATGGCCAAGCAATTCCTCTGAACAAA...TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATTTTGTTCAGAGGAATTaGTTGGCCATCGGGGTACCT +
Preference number: 4 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYFVQRN*LAIGVP
Trigger: AGGTACCCCGATGGCCAAGCAATTCCTCTGAACAAA...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTTGATTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTCTTTGTCATGGGGGCTaGTGTGCATTGCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FDSISFGRNFSTSALLTFLCHGG*CALQGA
Trigger: AGCACCCTGCAATGCACAGCAGCCCCCATGACAAAG...AAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAATCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558864.5
ENST00000558951.5
CDS-3UTR GCA 90 bp AGAGTGGGGTGGTATCTCTTTACTTTAAAAAGGGAAAGTTGTACAAGTTTCCCTCTGAGCCATCACACCTaGCCCGGTCACTGCAACTTT +
Preference number: 4 (lower is better)
Translates to: RVGWYLFTLKRESCTSFPLSHHT*PGHCNF
Trigger: AAAGTTGCAGTGACCGGGGCAGGTGTGATGGCTCAG...AGGGAAACTTGTACAACTTTCCCTTTTTAAAGTAAAGAGATACCACCCCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp CAAGTGTCCAAATATGTGAGGGCCTCTGCTTCTGAACTAGCTGTTCTTTTCCATAGGCGCTCGCCACCATaGCTGGCTGATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: QVSKYVRASASELAVLFHRRSPP*LADFYI
Trigger: AATATAAAAATCAGCCAGGCATGGTGGCGAGCGCCT...ATGGAAAAGAACAGCTAGTTCAGAAGCAGAGGCCCTCACATATTTGGACACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACAACGCACACGCATTCATaGAGTCAATCAACAACTGTT +
Preference number: 4 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTTHTHS*SQSTTV
Trigger: AACAGTTGTTGATTGACTGCATGAATGCGTGTGCGT...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGAACAAGGTTCATGCTTaGACGCACACGCATTCATGC +
Preference number: 4 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPENKVHA*THTHSC
Trigger: GCATGAATGCGTGTGCGTGCAAGCATGAACCTTGTT...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTTTTAAACAAGGTTCATaGTTGCACGCACACGCATTC +
Preference number: 4 (lower is better)
Translates to: LPKAAKVLNVVALVICPSFKQGS*LHAHAF
Trigger: GAATGCGTGTGCGTGCAAGCATGAACCTTGTTTAAA...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp TGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACACAGCAGCAGTTGGTTaGATTTCTCCCCGAGATAAG +
Preference number: 4 (lower is better)
Translates to: CPSAVFHRDYQSSCSICHTAAVG*ISPRDK
Trigger: CTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGT...GTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp AAGAAAGAACAAGTTATACATGCAGCACAGTTAGGACTCTGTGAAATGTCAGGGTCCAGGTTTCCAATCTaGCCCAAGTTGAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: KKEQVIHAAQLGLCEMSGSRFPI*PKLRYP
Trigger: CGGGTACCTCAACTTGGGCCAGATTGGAAACCTGGA...CCCTGACATTTCACAGAGTCCTAACTGTGCTGCATGTATAACTTGTTCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp ATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCAATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: IKHTYLFWGEPGCQNAEPIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...TGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp CACTGGCCTGGACGAGCCTCTAAGACACTAAGACATGAAGTTTCAACCAGCTCAATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: HWPGRASKTLRHEVSTSSIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...TGAGCTGGTTGAAACTTCATGTCTTAGTGTCTTAGAGGCTCGTCCAGGCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: WSSVPLQYFTEITKALVQSLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRATHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCAGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGT +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPGVGVR*RCEPPR
Trigger: ACGTGGTGGTTCGCACCTCCATCTCACACCCACGCC...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp TCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCTTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SISFGRNFSTSALLTFWSWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...AGACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATT +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNSGLRT*DGRSWI
Trigger: AATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGA...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCAACACACTTCCAGTCGTaGAAGTGGAAGTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISTHFQS*KWKFFA
Trigger: TGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGT...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp AAGTGTGTTTCTAAACCAGACCATTTTGCTAAGAACTTTATTGGGACAACTGGCAGCCTCTCAAGTAGCTaGGATTACAGGCGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: KCVSKPDHFAKNFIGTTGSLSSS*DYRRSP
Trigger: TGGCGAGCGCCTGTAATCCCAGCTACTTGAGAGGCT...GCCAGTTGTCCCAATAAAGTTCTTAGCAAAATGGTCTGGTTTAGAAACACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp AAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATGGAGGGAATGGGGAGTaGCTGCTTCATGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: KGQVLYYFIYMKCPGEANGGNGE*LLHGYG
Trigger: CCCATACCCATGAAGCAGCCACTCCCCATTCCCTCC...ATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGTGACATTCTGGGGTTaGGATCTGGGATTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANVTFWG*DLGFPP
Trigger: TGGAGGAAATCCCAGATCCCAACCCCAGAATGTCAC...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATTGCCCAGTGACATTCTaGGGTTGGGATCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANCPVTF*GWDLGF
Trigger: AAATCCCAGATCCCAACCCCAGAATGTCACTGGGCA...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
3UTR CAA 72 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTaGGTCATCTGTCCCTCTGCAGTATTTCACAGAGAT +
Preference number: 4 (lower is better)
Translates to: LPKAAKVLNVVA*VICPSAVFHRD
Trigger: ATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR TCA 90 bp CAAGTGTCCAAATATGTGAGGGCCTCTGCTTCTGAACTAGCTGTTCTTTTCCATACATCCTTCCAGTTGTaGCAACCCAAAATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QVSKYVRASASELAVLFHTSFQL*QPKMSP
Trigger: TGGAGACATTTTGGGTTGTCACAACTGGAAGGATGT...ATGGAAAAGAACAGCTAGTTCAGAAGCAGAGGCCCTCACATATTTGGACACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR TCA 90 bp AGAGTGGGGTGGTATCTCTTTACTTTAAAAAGGGAAAGTTGTACAAGTTTCCCTTTGCCAGGCTGGTCTTaGGCTCCTGACCTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RVGWYLFTLKRESCTSFPLPGWS*APDLRS
Trigger: ACTTCTTAGGTCAGGAGCTCAAGACCAGCCTGGCAA...AGGGAAACTTGTACAACTTTCCCTTTTTAAAGTAAAGAGATACCACCCCACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR TCA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGATCAACAACTGTTTGTaGGCCATGTCCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKINNCL*AMSKVL
Trigger: CAGCACTTTGGACATGGCTCACAAACAGTTGTTGAT...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGCTGAGTATGTACAGCTaGAGACAGAACTGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: VYGDCLESVPSSSALFPRLSMYS*RQNWLK
Trigger: TTTTAACCAGTTCTGTCTTCAGCTGTACATACTCAG...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGTGGCTAGCAATAAAATaGGAACAGTTATGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VYGDCLESVPSSSALFPRWLAIK*EQLCSW
Trigger: CCAAGAGCATAACTGTTCTCATTTTATTGCTAGCCA...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp TGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACAAGCACAGGATAGATTaGGCCATCGAACACAGATTG +
Preference number: 4 (lower is better)
Translates to: CPSAVFHRDYQSSCSICHKHRID*AIEHRL
Trigger: CAATCTGTGTTCGATGGCTCAATCTATCCTGTGCTT...GTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTAGGTGTGAGGGCCTCTaGTACTCAAGGTTGATCTTT +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSRCEGL*YSRLIF
Trigger: AAAGATCAACCTTGAGTAGCAGAGGCCCTCACACCT...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCGTGTTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGRVYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAACACG...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTCGTGTTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPKAAKVLNVVALVICPSRVYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAACACG...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTGGCATTGTACGCTATaGCCACGATGCAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSWHCTL*PRCSRN
Trigger: ATTCCTACTGCATCGTGGGCATAGCGTACAATGCCA...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATGGCATTGTACGCTATaGCCACGATGCAGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: WSSVPLQYFTEITKALVQWHCTL*PRCSRN
Trigger: ATTCCTACTGCATCGTGGGCATAGCGTACAATGCCA...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp GGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATCCACACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: GQVLYYFIYMKCPGEANPHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...TGGATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: CPSAVFHRDYQSSCSICHIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...GTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR GCA 90 bp CACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HKRPGVVLFHLYEMSRRGISKVH*PSAFSP
Trigger: GGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAAT...GCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGGTCTCAAGATCACCTTaGTTCTCCGGGTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILVSRSP*FSGLRT
Trigger: GGTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGAC...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp TTTGATTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTAAGGTGTGGTACGGGTaGTCTGCTGTGCCATACAGT +
Preference number: 4 (lower is better)
Translates to: FDSISFGRNFSTSALLTFKVWYG*SAVPYS
Trigger: ACTGTATGGCACAGCAGAGCACCCGTACCACACCTT...AAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR GCA 90 bp CTATTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCGTTTTCCAAAGTGGTTaGCAACTTAAACTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLTFWSGQFFVMGAAVHCVFQSG*QLKLLA
Trigger: AGCAAGGAGTTTAAGTTGGCAACCACTTTGGAAAAC...GCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCATGGGATTTCCTCCATTaGTTCCTTACATCAACATTT +
Preference number: 4 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPWDFLH*FLTSTF
Trigger: AAATGTTGATGTAAGGAAGCAATGGAGGAAATCCCA...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCTCCAGGTTTCCAATCTaGCCCAAGTTGAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSSRFPI*PKLRYP
Trigger: CGGGTACCTCAACTTGGGCCAGATTGGAAACCTGGA...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCTGGAGCCATTTCACCTaGGGGTCCATTCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KTILRKNHQVGGLALSYFWSHFT*GSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCA...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KTILRKNHQVGGLALSYFFTSCC*SHFTWG
Trigger: CCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAA...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTGTAGGAATCATAATTTaGGGCCAGGTCAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLVGIII*GQVRVI
Trigger: AATCACCCTGACCTGGCCCCAAATTATGATTCCTAC...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCCACGTAGGAATCATAATTTaGGGCCAGGTCAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: CPSAVFHRDYQSSCSICHVGIII*GQVRVI
Trigger: AATCACCCTGACCTGGCCCCAAATTATGATTCCTAC...GTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp ACTTGCAAAATGACAGTGACACAAAAACGCCCACCATTTCGGAAGAATCTGCTGGTAGGAATCATAATTTaGGGCCAGGTCAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: TCKMTVTQKRPPFRKNLLVGIII*GQVRVI
Trigger: AATCACCCTGACCTGGCCCCAAATTATGATTCCTAC...CAGCAGATTCTTCCGAAATGGTGGGCGTTTTTGTGTCACTGTCATTTTGCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CCA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: KLMVPEAAPKPELWIPRIIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp ATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCAGTTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: IKHTYLFWGEPGCQNAEPVYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAAC...TGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTGGATGCCTCCTATTTTaGCATTGTACGCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSGCLLF*HCTLCP
Trigger: TGGGCATAGCGTACAATGCCAAAATAGGAGGCATCC...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCGGATGCCTCCTATTTTaGCATTGTACGCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFGCLLF*HCTLCP
Trigger: TGGGCATAGCGTACAATGCCAAAATAGGAGGCATCC...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACGTCCGGCCCCCAGCTaGCACTGTAAATGTCGATGT +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPRPAPS*HCKCRC
Trigger: ACATCGACATTTACAGTGCCAGCTGGGGGCCGGACG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp GATGAAAACATTCTGGAATTAGATAGTGCTGACGTTTACATGACATCGTGGATGTTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: DENILELDSADVYMTSWMFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...CATCCACGATGTCATGTAAACGTCAGCACTATCTAATTCCAGAATGTTTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACTTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNFTSRC*TSLQVN
Trigger: GTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAA...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp AAATGCCTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: KCLHRFGRINPTVSCRLVVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...TACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCAGTTTGTCGGAAGACTaGAGCCAACAAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSSLSED*SQQAAF
Trigger: AAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACT...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGTGAAGTATTCCAATCAATaGGCATATTATAGCCCTACA +
Preference number: 4 (lower is better)
Translates to: TFWSGQFFVMGAAVHCRVKYSNQ*AYYSPT
Trigger: TGTAGGGCTATAATATGCCCATTGATTGGAATACTT...CACCCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
3UTR CAA 72 bp CTGTGGATTCCCAGAATTCATTTTGTTCCTGTTAGTTaGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAG +
Preference number: 4 (lower is better)
Translates to: LWIPRIHFVPVS*SEDWSQQAAFE
Trigger: CTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGGAACAAAATGAATTCTGGGAATCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CAA 72 bp TGGAATTACACGGGACCCAAAATAGCCAAAACAATCTaGAGAAAGAACCACCAAGTTGGAGGACTCGCACTT +
Preference number: 4 (lower is better)
Translates to: WNYTGPKIAKTI*RKNHQVGGLAL
Trigger: AAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
3UTR CAA 72 bp ATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATaGACATTTTGGTCTGGACAGTTCTTTGTCATGGGG +
Preference number: 4 (lower is better)
Translates to: ISFGRNFSTSAL*TFWSGQFFVMG
Trigger: CCCCATGACAAAGAACTGTCCAGACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558864.5
ENST00000558951.5
CDS-3UTR TCA 90 bp TATTATTTCCCTCTAAATATTTTTAGAGGAATGATAAGAGCTCAGGGTATGGGGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: YYFPLNIFRGMIRAQGMGTKWGR*SKGPAG
Trigger: ACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGT...CCCCATACCCTGAGCTCTTATCATTCCTCTAAAAATATTTAGAGGGAAATAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR TCA 90 bp TATTATTTCCCTCTAAATATTTTTAGAGGAATGATAAGAGCTCAGGGTATGGGGGGGGCCAGGTCAGGGTaGTTTCTCTCTATGCCATCA +
Preference number: 4 (lower is better)
Translates to: YYFPLNIFRGMIRAQGMGGARSG*FLSMPS
Trigger: TGATGGCATAGAGAGAAATCACCCTGACCTGGCCCC...CCCCATACCCTGAGCTCTTATCATTCCTCTAAAAATATTTAGAGGGAAATAATA
43% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR TCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACGATGTAGTTGGGTCTaGTGCCCAGCGACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPRCSWV*CPATLP
Trigger: AGGCAAAGTCGCTGGGCATCAGACCCAACTACATCG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCACATCTGATCAGCTCTaGGTCAAAGTAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSTSDQL*VKVGAW
Trigger: CCAGGCACCTACTTTGACTCAGAGCTGATCAGATGT...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYGIPHI*SALSQS
Trigger: ACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCC...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp TCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCTACATCCTTCCAGTTGTaGCAACCCAAAATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SISFGRNFSTSALLTFWSTSFQL*QPKMSP
Trigger: TGGAGACATTTTGGGTTGTCACAACTGGAAGGATGT...AGACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558864.5
ENST00000558951.5
CDS-3UTR TCA 90 bp AGAGTGGGGTGGTATCTCTTTACTTTAAAAAGGGAAAGTTGTACAAGTTTCCCTATGAGGCAAGGAGACTaGGGAACTGTTCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: RVGWYLFTLKRESCTSFPMRQGD*GTVPDG
Trigger: TCCATCTGGAACAGTTCCTCAGTCTCCTTGCCTCAT...AGGGAAACTTGTACAACTTTCCCTTTTTAAAGTAAAGAGATACCACCCCACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCCGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: KTILRKNHQVGGLALSYFRFTSC*WSHFTW
Trigger: CCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACG...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp GTCATCTTTTTGTTATGCTTTCTACTGGAGATACAGAACCGACTAAACAATACTGCCCCTCTTCCACGCTaGCTGGACATTCATTTCCGA +
Preference number: 4 (lower is better)
Translates to: VIFLLCFLLEIQNRLNNTAPLPR*LDIHFR
Trigger: TCGGAAATGAATGTCCAGGCAGCGTGGAAGAGGGGC...AGTATTGTTTAGTCGGTTCTGTATCTCCAGTAGAAAGCATAACAAAAAGATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGCACAACGAGAGCTTCTaGGTCCACCAAACCAAATCC +
Preference number: 4 (lower is better)
Translates to: LQIHMELHGTQNSQNNLEHNESF*VHQTKS
Trigger: GGATTTGGTTTGGTGGACGCAGAAGCTCTCGTTGTG...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp GATGAAAACATTCTGGAATTAGATAGTGCTGACGTTTACATGACATCGTGGATGTGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DENILELDSADVYMTSWMCCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...CATCCACGATGTCATGTAAACGTCAGCACTATCTAATTCCAGAATGTTTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR GCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCAATGCAGCTGCCCCGTaGAAGGCTGAATCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSNAAAP*KAESFF
Trigger: AAAGAAGGATTCAGCCTTGCACGGGGCAGCTGCATT...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TTTGATTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTAATGTCTCCAGACGTTaGCAAATGTCCCCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FDSISFGRNFSTSALLTFNVSRR*QMSPLL
Trigger: CAGCAACGGGGACATTTGGCAACGTCTGGAGACATT...AAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp TGGGCATATTATAGCCCTACATTTATTGAGGCACTCTTTAATTTCAGCAGCATCGGGTTTTGTCATGTTTaGCAGGCTGGTCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: WAYYSPTFIEALFNFSSIGFCHV*QAGLEL
Trigger: GAGCTCAAGACCAGCCTGGCAAACATGACAAAACCC...GATGCTGCTGAAATTAAAGAGTGCCTCAATAAATGTAGGGCTATAATATGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp GGAGCCAACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAGTCATTTCTAGTTGGTaGGTTTCCTTTACTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GANKQHLRGYHHFRNTSLVISSW*VSFTCS
Trigger: GCTGCAAGTAAAGGAAACGCACCAACTAGAAATGAC...TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CCA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGTCCAGGTTTCCAATCTaGCCCAAGTTGAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILSRFPI*PKLRYP
Trigger: CGGGTACCTCAACTTGGGCCAGATTGGAAACCTGGA...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAACGTTCACGTCGTAGCTaGCGTAGGAATCATAATTTG +
Preference number: 4 (lower is better)
Translates to: WSSVPLQYFTEITKALVQRSRRS*RRNHNL
Trigger: CAAATTATGATTCCTACGCCAGCTACGACGTGAACG...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp TGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCGTTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: WTSKGSQSSKCGGFGHLSVYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAAC...GGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTGGATGCCTCCTATTTTaGCATTGTACGCTATGCCCA +
Preference number: 4 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSGCLLF*HCTLCP
Trigger: TGGGCATAGCGTACAATGCCAAAATAGGAGGCATCC...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGTCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: LQIHMELHGTQNSQNNLESLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACACACATGTGCTGCGATaGCACTGCTGTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNTHVLR*HCCPLL
Trigger: AAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGT...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp GACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: DTKGQVLYYFIYMKCPGEVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...CTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp TTTGATTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: FDSISFGRNFSTSALLTFVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...AAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTCGAACCTCTCTTCTGTaGTCAGTTGATTTGCAACAG +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSRTSLL*SVDLQQ
Trigger: CTGTTGCAAATCAACTGACCACAGAAGAGAGGTTCG...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACACACTTCCAGTCGTaGAAGTGGAAGTTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRATHFQS*KWKFFA
Trigger: TGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGT...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CCA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCGGGGTACCTTTTGGCTaGCCACAGAATGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSGVPFG*PQNASC
Trigger: ACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCC...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCCATCGGGGTACCTTTTaGCTGGCCACAGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSHRGTF*LATECL
Trigger: GAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATG...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGTTCAGAGGAATTGCTTaGCCATCGGGGTACCTTTTG +
Preference number: 4 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGFRGIA*PSGYLL
Trigger: CAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACGTTCACGTCGTAGCTaGCGTAGGAATCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPRSRRS*RRNPGT
Trigger: GGTACCTGGATTCCTACGCCAGCTACGACGTGAACG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAATGTATGGTGACTGTTTaGAGAGTGTGCCAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: NVVALVICPSAVFHRDYQCMVTV*RVCQVL
Trigger: AAGAACTTGGCACACTCTCCAAACAGTCACCATACA...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTAAACGAGGAGAGTTTTaGGGAAAGGCGTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSKRGEF*GKASLS
Trigger: TGACAGTGACGCCTTTCCCCAAAACTCTCCTCGTTT...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp AATATTTTTAGAGGAATGATAAGAGCTCAGGGTATGGGGCATGCTGATGGAGAATCACACAGCAGGTCATaGAGACGGTTAGACTTAAGG +
Preference number: 4 (lower is better)
Translates to: NIFRGMIRAQGMGHADGESHSRS*RRLDLR
Trigger: CCTTAAGTCTAACCGTCTCCATGACCTGCTGTGTGA...TTCTCCATCAGCATGCCCCATACCCTGAGCTCTTATCATTCCTCTAAAAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678918.1
3UTR CAA 72 bp TTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTaGAGAGGATATCACCATTTTAGGAACACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LVCRKTGANKQH*RGYHHFRNTSL
Trigger: TAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
3UTR CAA 72 bp ATGGAACTTTTTGACAACAGTGTGTATGGTGACTGTTaGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: MELFDNSVYGDC*ESVPSSSALFP
Trigger: TGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACACACTGTTGTCAAAAAGTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR CAA 72 bp AACAATACTGTGATTCATAAATGTGCACAGCAGCAGTaGGTTGCATTTCTCCCCGAGATAAGTGGGGATACA +
Preference number: 4 (lower is better)
Translates to: NNTVIHKCAQQQ*VAFLPEISGDT
Trigger: TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR TCA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGGTAGGAATTGTTTGCTaGAGCAGCAACTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILVGIVC*SSNFSR
Trigger: GCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTAC...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: KTILRKNHQVGGLALSYFKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACTCTTTGCCAGAAGTTaGGACTTGGTTCCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPLFARS*DLVPEG
Trigger: TCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATATCTTATTTATAGTCTaGCCAAACCGTCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANILFIV*PNRPQT
Trigger: AGTCTGGGGACGGTTTGGTCAGACTATAAATAAGAT...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGCCTATTCAAGGGAATTaGTCAAGCAGATCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKPIQGN*SSRSVH
Trigger: ATGCACAGATCTGCTTGATCAATTCCCTTGAATAGG...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp AACCAGACCATTTTGCTAAGAACTTTATTGGGACAACTGGCAGAACTAGAATTCCCCAGCACCATTTATTaGAAAGACCATCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: NQTILLRTLLGQLAELEFPSTIY*KDHLLP
Trigger: GGGGAGAAGATGGTCTTTTCAATAAATGGTGCTGGG...GAATTCTAGTTCTGCCAGTTGTCCCAATAAAGTTCTTAGCAAAATGGTCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR TCA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGTGGCTAGCAATAAAATaGGAACAGTTATGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEWLAIK*EQLCSW
Trigger: CCAAGAGCATAACTGTTCTCATTTTATTGCTAGCCA...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LQIHMELHGTQNSQNNLEMGHNH*RSRRSW
Trigger: CCAGCTACGACGTGAACGGCAATGATTATGACCCAT...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATCGTGTTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYRVYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAACACG...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR GCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACCTCCCGCACAACGAGTaGCGTGTTTATTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNLPHNE*RVYFHC
Trigger: GCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACACGCTATGCCCACGATaGAGTAGGAATTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNTLCPR*SRNCLL
Trigger: CAGCAAACAATTCCTACTGCATCGTGGGCATAGCGT...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp AAATGCCTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATCCAGCAACCTCTTTaGCAGAAGTTGAGACTTGGT +
Preference number: 4 (lower is better)
Translates to: KCLHRFGRINPTVSCRLVIQQPL*QKLRLG
Trigger: ACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGAT...TACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAGGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR GCA 90 bp TCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCTTACTCCCTGCTAGAATaGAGACAGAACACAGAATCA +
Preference number: 4 (lower is better)
Translates to: SISFGRNFSTSALLTFWSYSLLE*RQNTES
Trigger: TGATTCTGTGTTCTGTCTGCATTCTAGCAGGGAGTA...AGACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp AACCAGACCATTTTGCTAAGAACTTTATTGGGACAACTGGCAGAACTAGAATTCGTAAGAACAGGACATTaGCACATTCCAGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: NQTILLRTLLGQLAELEFVRTGH*HIPEAL
Trigger: GAGGGCTTCTGGAATGTGGCAATGTCCTGTTCTTAC...GAATTCTAGTTCTGCCAGTTGTCCCAATAAAGTTCTTAGCAAAATGGTCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCGGCACAGAAGGCATGTaGTTTAAATCTGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFGTEGM*FKSVFL
Trigger: AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCC...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCTCCAGGTTTCCAATCTaGCCCAAGTTGAGGTACCCG +
Preference number: 4 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSSRFPI*PKLRYP
Trigger: CGGGTACCTCAACTTGGGCCAGATTGGAAACCTGGA...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: NVVALVICPSAVFHRDYQIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTGCTGGCATCATATCGTaGAGATGGGTCATAATCATT +
Preference number: 4 (lower is better)
Translates to: IAKTILRKNHQVGGLALSAGIIS*RWVIII
Trigger: AATGATTATGACCCATCTCCACGATATGATGCCAGC...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACGTTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHVYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAAC...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CCA 90 bp AAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATTCCCTCCAGGTTAACTaGCTGTTTGCTTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: KGQVLYYFIYMKCPGEANSLQVN*LFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGA...ATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp AAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: KGQVLYYFIYMKCPGEANWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...ATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp AACCAGACCATTTTGCTAAGAACTTTATTGGGACAACTGGCAGAACTAGAATTCCTTCCCCCTGTGGCTTaGGTTTTCACTCTCTTAATG +
Preference number: 4 (lower is better)
Translates to: NQTILLRTLLGQLAELEFLPPVA*VFTLLM
Trigger: CATTAAGAGAGTGAAAACCCAAGCCACAGGGGGAAG...GAATTCTAGTTCTGCCAGTTGTCCCAATAAAGTTCTTAGCAAAATGGTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp AAGTGTGTTTCTAAACCAGACCATTTTGCTAAGAACTTTATTGGGACAACTGGCAGTATCTTCCCCCTGTaGCTTGGGTTTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: KCVSKPDHFAKNFIGTTGSIFPL*LGFSLS
Trigger: AGAGAGTGAAAACCCAAGCCACAGGGGGAAGATACT...GCCAGTTGTCCCAATAAAGTTCTTAGCAAAATGGTCTGGTTTAGAAACACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp GATGAAAACATTCTGGAATTAGATAGTGCTGACGTTTACATGACATCGTGGATGGGAGTGGCTGCTTCATaGGTATGGGGTTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: DENILELDSADVYMTSWMGVAAS*VWGFFL
Trigger: CAAAAAGAAACCCCATACCCATGAAGCAGCCACTCC...CATCCACGATGTCATGTAAACGTCAGCACTATCTAATTCCAGAATGTTTTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CCA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAATCTCCCCGAGATAAGTaGGGATACATACTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: NVVALVICPSAVFHRDYQSPRDK*GYILLF
Trigger: AAAAAGAAGTATGTATCCCCACTTATCTCGGGGAGA...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp TTTAGAGGAATGATAAGAGCTCAGGGTATGGGGCATGCTGATGGAGAAGGAAAGACTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: FRGMIRAQGMGHADGEGKTYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAGT...CTTTCCTTCTCCATCAGCATGCCCCATACCCTGAGCTCTTATCATTCCTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR TCA 90 bp AAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATAAATGGCTAACTTTATaGCCCGCGCCGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: KGQVLYYFIYMKCPGEANKWLTL*PAPFTF
Trigger: GAAAGTGAACGGCGCGGGTCATAAAGTTAGCCATTT...ATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACTCTTCTGTGGTCAGTTaGTTTGCAACAGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNSSVVS*FATGVS
Trigger: TGAGACTCCTGTTGCAAATCAACTGACCACAGAAGA...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR TCA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGT +
Preference number: 4 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSGIPHI*SALSQS
Trigger: ACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCC...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR TCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTCCAAGGAAGTGGGAGTaGTACTCTATAATTGCACTT +
Preference number: 4 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSPRKWE*YSIIAL
Trigger: AAGTGCAATTATAGAGTATCACTCCCACTTCCTTGG...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR GCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACGTCCAGCATGCGGATaGCTCCTATTTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPRPACG*LLFWHC
Trigger: ACAATGCCAAAATAGGAGGCATCCGCATGCTGGACG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCATGCTGTCCACTTCTTTaGCTCCACAACGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPCCPLL*LHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCA...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR GCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTTTTAAACAAGGTTCATaGTTGCACGCACACGCATTC +
Preference number: 4 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSFKQGS*LHAHAF
Trigger: GAATGCGTGTGCGTGCAAGCATGAACCTTGTTTAAA...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp GTCATCTTTTTGTTATGCTTTCTACTGGAGATACAGAACCGACTAAACAATACTCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VIFLLCFLLEIQNRLNNTPEVET*FPREKP
Trigger: TGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGG...AGTATTGTTTAGTCGGTTCTGTATCTCCAGTAGAAAGCATAACAAAAAGATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCATGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp GTCATCTTTTTGTTATGCTTTCTACTGGAGATACAGAACCGACTAAACAATACTTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: VIFLLCFLLEIQNRLNNTWDGRS*ISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCA...AGTATTGTTTAGTCGGTTCTGTATCTCCAGTAGAAAGCATAACAAAAAGATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCAGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPVADLG*QILDFQ
Trigger: TTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAAC...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCATTAACAATGCATGGCTaGCTTTACATTTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PVSLSEDWSQQAAFERISLTMHG*LYILFR
Trigger: TCTGAACAAAATGTAAAGCCAGCCATGCATTGTTAA...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CCA 90 bp TCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCTGCACTATTGACATTTTaGTCTGGACAGTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SISFGRNFSTSALLTFWSALLTF*SGQFFV
Trigger: GACAAAGAACTGTCCAGACCAAAATGTCAATAGTGC...AGACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000558864.5
ENST00000558951.5
CDS-3UTR CCA 90 bp TGGGCATATTATAGCCCTACATTTATTGAGGCACTCTTTAATTTCAGCAGCATCCCCCATATGGATATTTaGTGGACCCAGCACCATTTA +
Preference number: 4 (lower is better)
Translates to: WAYYSPTFIEALFNFSSIPHMDI*WTQHHL
Trigger: TAAATGGTGCTGGGTCCACCAAATATCCATATGGGG...GATGCTGCTGAAATTAAAGAGTGCCTCAATAAATGTAGGGCTATAATATGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp TTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCATATTTTTCCCCATATaGATATTTGGTGGACCCAGC +
Preference number: 4 (lower is better)
Translates to: FHFFWPEFLNLGTIDILVIFFPI*IFGGPS
Trigger: GCTGGGTCCACCAAATATCCATATGGGGAAAAATAT...GACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp GGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATCCACAAAGAAATGGTAAGTaGATTAGAGGTTGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GQVLYYFIYMKCPGEANPQRNGK*IRGCQE
Trigger: CTCCTGGCAACCTCTAATCCACTTACCATTTCTTTG...TGGATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp AAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCAAATATACAAAAGCTGTCATaGGATTCCCAAGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: KGQVLYYFIYMKCPGEANIQKLS*DSQEPL
Trigger: CAGTGGCTCTTGGGAATCTCATGACAGCTTTTGTAT...ATTTGCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR TCA 90 bp AAGAAAGAACAAGTTATACATGCAGCACAGTTAGGACTCTGTGAAATGTCAGGGCTGAGTATGTACAGCTaGAGACAGAACTGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: KKEQVIHAAQLGLCEMSGLSMYS*RQNWLK
Trigger: TTTTAACCAGTTCTGTCTTCAGCTGTACATACTCAG...CCCTGACATTTCACAGAGTCCTAACTGTGCTGCATGTATAACTTGTTCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR GCA 90 bp AAGAAAGAACAAGTTATACATGCAGCACAGTTAGGACTCTGTGAAATGTCAGGGAGAACAAGTTATACATaGAGCACAGTTAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: KKEQVIHAAQLGLCEMSGRTSYT*STVRTL
Trigger: CAGAGTCCTAACTGTGCTGCATGTATAACTTGTTCT...CCCTGACATTTCACAGAGTCCTAACTGTGCTGCATGTATAACTTGTTCTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CCA 90 bp TCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCTCAGCCTACAAATAACTaGCCTATAGTCTTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: SISFGRNFSTSALLTFWSQPTNN*PIVFKS
Trigger: GCTTTTAAAGACTATAGGCCAGTTATTTGTAGGCTG...AGACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp ATAGGAACAGGGACAGAAGTCAAACCATATGTGGTTTTATTCATTGAGGGTATCCAGGGATGGAATTACTaGGTCATAGGGCTTACTTAT +
Preference number: 4 (lower is better)
Translates to: IGTGTEVKPYVVLFIEGIQGWNY*VIGLTY
Trigger: ATAAGTAAGCCCTATGACCCAGTAATTCCATCCCTG...GATACCCTCAATGAATAAAACCACATATGGTTTGACTTCTGTCCCTGTTCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CCA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTTCTCCCCGAGATAAGTaGGGATACATACTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSSPRDK*GYILLF
Trigger: AAAAAGAAGTATGTATCCCCACTTATCTCGGGGAGA...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
3UTR CAA 72 bp GAGGCACTCTTTAATTTCAGCAGCATCCTGCAGATTTaGTGTCAAGGCCTTGTATATCCTTTACTAGATTGT +
Preference number: 4 (lower is better)
Translates to: EALFNFSSILQI*CQGLVYPLLDC
Trigger: ACAATCTAGTAAAGGATATACAAGGCCTTGACACAAAATCTGCAGGATGCTGCTGAAATTAAAGAGTGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp GGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATGGTAAAGAGATTGACTaGAATATTAATGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: GHLSLCSISQRLPKLLFNGKEID*NINANG
Trigger: CCCATTTGCATTAATATTGCAGTCAATCTCTTTACC...ATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CCA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGATCATATCGTGGAGATaGGTCATAATCATTGCCGTT +
Preference number: 4 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILIISWR*VIIIAV
Trigger: AACGGCAATGATTATGACCCATCTCCACGATATGAT...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGATATACAGACCAATaGAACAGAATCGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILRYTDQ*NRIESV
Trigger: CACACTCTCGATTCTGTTCCATTGGTCTGTATATCT...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp ATAGGAACAGGGACAGAAGTCAAACCATATGTGGTTTTATTCATTGAGGGTATCAGGAACTGTTCCAGATaGAAGAACATTAAAGAGACA +
Preference number: 4 (lower is better)
Translates to: IGTGTEVKPYVVLFIEGIRNCSR*KNIKET
Trigger: TGTCTCTTTAATGTTCTTCCATCTGGAACAGTTCCT...GATACCCTCAATGAATAAAACCACATATGGTTTGACTTCTGTCCCTGTTCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR GCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACGTGTTTATTTTCATTaGTGGCATCATATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPRVYFH*WHHIVE
Trigger: CTCCACGATATGATGCCAGCAATGAAAATAAACACG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CCA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCAGTTTATTTTCATTGCTaGCATCATATCGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPVYFHC*HHIVEM
Trigger: CATCTCCACGATATGATGCCAGCAATGAAAATAAAC...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS CCA 90 bp GGATATCGCAGCTTGGCAGGGTTGGGAGACGCTCCCAGGCCCCGCTaGGGCTGGACGGCCAGACGACAAGGCGGGAGCAGCCGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: GYRSLAGLGDAPRPR*GWTARRQGGSSRPC
Trigger: GCAGGGACGGCTGCTCCCGCCTTGTCGTCTGGCCGTCCAGCCCCAGCGGGGCCTGGGAGCGTCTCCCAACCCTGCCAAGCTGCGATATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAGGCCCGTCCACCGTCTaGCCGTCGTCGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRGPSTV*PSSSGP
Trigger: GGGGCCGGACGACGACGGCAAGACGGTGGACGGGCC...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS TCA 90 bp GCTGGGAGCTCGAGGACGCCACGAGAGCCACATGGGCACCCGGCTTaGCCTTGCACGGCCGCACCCGTGCCTGAGCCCTCATGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: AGSSRTPREPHGHPA*PCTAAPVPEPSWVC
Trigger: GCACACCCATGAGGGCTCAGGCACGGGTGCGGCCGTGCAAGGTCAAGCCGGGTGCCCATGTGGCTCTCGTGGCGTCCTCGAGCTCCCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp CCTGAAGGGCTGTGCCTGGCATGGCCTGTGACTCCTGGAGAAGCCTaGCTCGCGCCCAGGCAGGGAAGATACGCCGGCAGCCACCGCCTC +
Preference number: 5 (lower is better)
Translates to: PEGLCLAWPVTPGEA*LAPRQGRYAGSHRL
Trigger: GAGGCGGTGGCTGCCGGCGTATCTTCCCTGCCTGGGCGCGAGGCAGGCTTCTCCAGGAGTCACAGGCCATGCCAGGCACAGCCCTTCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CAA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCGGCCCGTCCACCGTCTaGCCGTCGTCGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVGPSTV*PSSSGP
Trigger: GGGGCCGGACGACGACGGCAAGACGGTGGACGGGCC...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTAGGCCCGTCCACCGTCTaGCCGTCGTCGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLGPSTV*PSSSGP
Trigger: GGGGCCGGACGACGACGGCAAGACGGTGGACGGGCC...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAGGCCCGTCCACCGTCTaGCCGTCGTCGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGGPSTV*PSSSGP
Trigger: GGGGCCGGACGACGACGGCAAGACGGTGGACGGGCC...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS TCA 90 bp GAGCACTTTGCATGCATCCGGCATGCCCATGGGGGCCCCAGGTCATaGGGAGGTGCAGGGACCTTCCTGCACCTGAGGGTGCCGAGCGGG +
Preference number: 5 (lower is better)
Translates to: EHFACIRHAHGGPRS*GGAGTFLHLRVPSG
Trigger: CCCGCTCGGCACCCTCAGGTGCAGGAAGGTCCCTGCACCTCCTCATGACCTGGGGCCCCCATGGGCATGCCGGATGCATGCAAAGTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS TCA 90 bp GAGCCATGTCCCCTGAGCTGGCCTGTGAGGACAGCACCAGGGCCTTaGATCGCATCCGTCTCCAGGCCCTCTGGGGCAGCCTTGGCACGC +
Preference number: 5 (lower is better)
Translates to: EPCPLSWPVRTAPGP*IASVSRPSGAALAR
Trigger: GCGTGCCAAGGCTGCCCCAGAGGGCCTGGAGACGGATGCGATTCAAGGCCCTGGTGCTGTCCTCACAGGCCAGCTCAGGGGACATGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 90 bp GCCACATGGGCACCCGGCTTGACCTTGCACGGCCGCACCCGTGCCTaGGCCCTCATGGGTGTGCACCAGTGGTTGGTGGGTGCATCTGTC +
Preference number: 5 (lower is better)
Translates to: ATWAPGLTLHGRTRA*ALMGVHQWLVGASV
Trigger: GACAGATGCACCCACCAACCACTGGTGCACACCCATGAGGGCTCAGGCACGGGTGCGGCCGTGCAAGGTCAAGCCGGGTGCCCATGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp GGTGATAGAACCCGCGGCGGCAAGACAGGCACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACCCCTTGTGGCACCGGCGACAGCGTC +
Preference number: 5 (lower is better)
Translates to: GDRTRGGKTGTASQL*WSRSHTPCGTGDSV
Trigger: GACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCGCCGCGGGTTCTATCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS GCA 90 bp GCAGAGCAGCCCTCTGATGGGGTCTGGTCTCACCACGGACTCCGCTaGTCTGGAGCCCCAGGTGCAGCATCGCTTCAGCCTGGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: AEQPSDGVWSHHGLR*SGAPGAASLQPGWE
Trigger: CTCCCACCCAGGCTGAAGCGATGCTGCACCTGGGGCTCCAGAGCAGCGGAGTCCGTGGTGAGACCAGACCCCATCAGAGGGCTGCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp GAGAGCCACATGGGCACCCGGCTTGACCTTGCACGGCCGCACCCGTaGCTGAGCCCTCATGGGTGTGCACCAGTGGTTGGTGGGTGCATC +
Preference number: 5 (lower is better)
Translates to: ESHMGTRLDLARPHP*LSPHGCAPVVGGCI
Trigger: GATGCACCCACCAACCACTGGTGCACACCCATGAGGGCTCAGGCACGGGTGCGGCCGTGCAAGGTCAAGCCGGGTGCCCATGTGGCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 90 bp CTGACTCCACAGAAGCTGGCCGTGCCTGAAGGGCTGTGCCTGGCATaGCCTGTGACTCCTGGAGAAGCCTGCCTCGCGCCCAGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LTPQKLAVPEGLCLA*PVTPGEACLAPRQG
Trigger: TCCCTGCCTGGGCGCGAGGCAGGCTTCTCCAGGAGTCACAGGCCATGCCAGGCACAGCCCTTCAGGCACGGCCAGCTTCTGTGGAGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS CCA 90 bp GCCAGCAGGGTGACAGCCTTTGCACTTTGGCCAGTGAGTGCGCTGTaGCTGGGAGCTCGAGGACGCCACGAGAGCCACATGGGCACCCGG +
Preference number: 5 (lower is better)
Translates to: ASRVTAFALWPVSAL*LGARGRHESHMGTR
Trigger: CCGGGTGCCCATGTGGCTCTCGTGGCGTCCTCGAGCTCCCAGCCACAGCGCACTCACTGGCCAAAGTGCAAAGGCTGTCACCCTGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGGGTGACAGGGCAGCCTaGGGTGGCTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVGDRAA*GGSSSG
Trigger: CCCAGAGCTGGAGCCACCCAAGGCTGCCCTGTCACC...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCCAGGTCTCACACCCCTaGTGGCACCGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: LSATWAGTSRVVHQWGVSQVSHP*WHRRQR
Trigger: ACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTG...GCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS TCA 90 bp TCAGACACCAGGCCTCCTCGTGGGGCTCTTTGCAGAGCAGCCCTCTaGTGGGGTCTGGTCTCACCACGGACTCCGCTGCTCTGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: SDTRPPRGALCRAAL*WGLVSPRTPLLWSP
Trigger: GGGGCTCCAGAGCAGCGGAGTCCGTGGTGAGACCAGACCCCATCAGAGGGCTGCTCTGCAAAGAGCCCCACGAGGAGGCCTGGTGTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp GGCCGAGTGCTTGAAGGAGCACGTTTCCCATCCTGGGGCCGTGAGTaGACCCCGGCTATGCTGCTGCCTGTCCTGAGTCCAGAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: GRVLEGARFPSWGRE*TPAMLLPVLSPEPG
Trigger: ACCGGGCTCTGGACTCAGGACAGGCAGCAGCATAGCCGGGGTGCACTCACGGCCCCAGGATGGGAAACGTGCTCCTTCAAGCACTCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp ACCACACGGCTCCCAGAGCTGTGTCAGTCTTCTCTCTCCAGCGGCTaGCGGGCTGCGATGGCTGTAGGCTTGGGGTCCAGGCCAGACTCC +
Preference number: 5 (lower is better)
Translates to: TTRLPELCQSSLSSG*RAAMAVGLGSRPDS
Trigger: GGAGTCTGGCCTGGACCCCAAGCCTACAGCCATCGCAGCCCGGCAGCCGCTGGAGAGAGAAGACTGACACAGCTCTGGGAGCCGTGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp GCGGGATGTGGCCCTGGGTGGGGAGGCTGGCCTGACCTTGGCAGGTaGACAGGCTCTGCCTTGTCGTTCAGGTGCAACCACCAACGTAGG +
Preference number: 5 (lower is better)
Translates to: AGCGPGWGGWPDLGR*TGSALSFRCNHQRR
Trigger: CCTACGTTGGTGGTTGCACCTGAACGACAAGGCAGAGCCTGTGCACCTGCCAAGGTCAGGCCAGCCTCCCCACCCAGGGCCACATCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 90 bp AGGAACAGGCTGACTCCACAGAAGCTGGCCGTGCCTGAAGGGCTGTaGCTGGCATGGCCTGTGACTCCTGGAGAAGCCTGCCTCGCGCCC +
Preference number: 5 (lower is better)
Translates to: RNRLTPQKLAVPEGL*LAWPVTPGEACLAP
Trigger: GGGCGCGAGGCAGGCTTCTCCAGGAGTCACAGGCCATGCCAGGCACAGCCCTTCAGGCACGGCCAGCTTCTGTGGAGTCAGCCTGTTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS GCA 90 bp TGGTCGGCAGGAGTGACGCCTGAAGCTACAGCTGGGGTGGACTCCTaGCTACTGCCCACCTGTCCCTCCTACGCTGGGAAACGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: WSAGVTPEATAGVDS*LLPTCPSYAGKRPR
Trigger: CCTGGGCCGTTTCCCAGCGTAGGAGGGACAGGTGGGCAGTAGGCAGGAGTCCACCCCAGCTGTAGCTTCAGGCGTCACTCCTGCCGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 90 bp GATAGAACCCGCGGCGGCAAGACAGGCACTGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCTTGTGGCACCGGCGACAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: DRTRGGKTGTASQLC*SRSHTPCGTGDSVL
Trigger: CAAGACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCGCCGCGGGTTCTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS CCA 90 bp GTGGTGGGAATGGGGATGGATCTCCGCATGCTCAGGACCGCCTGGTaGGGCTGTTGCTGGCCAGGTCTAGGGTGGGGCAGGGACACAGCT +
Preference number: 5 (lower is better)
Translates to: VVGMGMDLRMLRTAW*GCCWPGLGWGRDTA
Trigger: AGCTGTGTCCCTGCCCCACCCTAGACCTGGCCAGCAACAGCCCCACCAGGCGGTCCTGAGCATGCGGAGATCCATCCCCATTCCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 90 bp GCCGCACCCGTGCCTGAGCCCTCATGGGTGTGCACCAGTGGTTGGTaGGTGCATCTGTCACCCAGGCCTTTGGGGAGCCTAGCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: AAPVPEPSWVCTSGW*VHLSPRPLGSLAVS
Trigger: GGACACTGCTAGGCTCCCCAAAGGCCTGGGTGACAGATGCACCCACCAACCACTGGTGCACACCCATGAGGGCTCAGGCACGGGTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 90 bp ACGGCCGCACCCGTGCCTGAGCCCTCATGGGTGTGCACCAGTGGTTaGTGGGTGCATCTGTCACCCAGGCCTTTGGGGAGCCTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: TAAPVPEPSWVCTSG*WVHLSPRPLGSLAV
Trigger: CACTGCTAGGCTCCCCAAAGGCCTGGGTGACAGATGCACCCACCAACCACTGGTGCACACCCATGAGGGCTCAGGCACGGGTGCGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGTGACAGGGCAGCCTaGGGTGGCTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDGDRAA*GGSSSG
Trigger: CCCAGAGCTGGAGCCACCCAAGGCTGCCCTGTCACC...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGCAGGTCTCACACCCCTaGTGGCACCGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRQVSHP*WHRRQR
Trigger: ACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTG...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCACAGGTCTCACACCCCTaGTGGCACCGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAQVSHP*WHRRQR
Trigger: ACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTG...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGGCAGCTAGCCTACGCTaGGGTGACGCTGGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKAASLR*GDAGPR
Trigger: CCTCGGGCCAGCGTCACCCAAGCGTAGGCTAGCTGC...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS TCA 90 bp GTGCACCCCGGCTATGCTGCTGCCTGTCCTGAGTCCAGAGCCCGGTaGCTCGGTCTCCACAGTGCTTGCATCAGCTGCCCACCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: VHPGYAAACPESRAR*LGLHSACISCPPPH
Trigger: ATGGGGAGGTGGGCAGCTGATGCAAGCACTGTGGAGACCGAGTCACCGGGCTCTGGACTCAGGACAGGCAGCAGCATAGCCGGGGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 90 bp CATCCTGGGGCCGTGAGTGCACCCCGGCTATGCTGCTGCCTGTCCTaGGTCCAGAGCCCGGTGACTCGGTCTCCACAGTGCTTGCATCAG +
Preference number: 5 (lower is better)
Translates to: HPGAVSAPRLCCCLS*VQSPVTRSPQCLHQ
Trigger: CTGATGCAAGCACTGTGGAGACCGAGTCACCGGGCTCTGGACTCAGGACAGGCAGCAGCATAGCCGGGGTGCACTCACGGCCCCAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 90 bp GACGACAAGGCGGGAGCAGCCGTCCCTGCGGGTAACAGGCACAGCTaGGCCTCGCTGGGCTCCAGTGTCAGTCTGAGCACTCTAGACAGG +
Preference number: 5 (lower is better)
Translates to: DDKAGAAVPAGNRHS*ASLGSSVSLSTLDR
Trigger: CCTGTCTAGAGTGCTCAGACTGACACTGGAGCCCAGCGAGGCTCAGCTGTGCCTGTTACCCGCAGGGACGGCTGCTCCCGCCTTGTCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp ATGCCTGCTTACCCTCGGGGAGTGGGAGAGATGCCCCACAATTCCTaGCCCTCTCGGACGGTCCTGGCCCAGCCTGCGCAGAGATGGACA +
Preference number: 5 (lower is better)
Translates to: MPAYPRGVGEMPHNS*PSRTVLAQPAQRWT
Trigger: TGTCCATCTCTGCGCAGGCTGGGCCAGGACCGTCCGAGAGGGGCAGGAATTGTGGGGCATCTCTCCCACTCCCCGAGGGTAAGCAGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp CTTGCCGATGCGGGCCGAGTGCTTGAAGGAGCACGTTTCCCATCCTaGGGCCGTGAGTGCACCCCGGCTATGCTGCTGCCTGTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: LADAGRVLEGARFPS*GRECTPAMLLPVLS
Trigger: ACTCAGGACAGGCAGCAGCATAGCCGGGGTGCACTCACGGCCCCAGGATGGGAAACGTGCTCCTTCAAGCACTCGGCCCGCATCGGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp CTGGGGAAGATGCTGCCAGACTCTGCCCTCCAGGCACTCCTTTGCTaGACACAGCTGCCTGCCGTTCCCCGCCAGGAGGACCGTACCTTC +
Preference number: 5 (lower is better)
Translates to: LGKMLPDSALQALLC*TQLPAVPRQEDRTF
Trigger: GAAGGTACGGTCCTCCTGGCGGGGAACGGCAGGCAGCTGTGTCCAGCAAAGGAGTGCCTGGAGGGCAGAGTCTGGCAGCATCTTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS CCA 90 bp GGGATGGATCTCCGCATGCTCAGGACCGCCTGGTGGGGCTGTTGCTaGCCAGGTCTAGGGTGGGGCAGGGACACAGCTAGACAGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GMDLRMLRTAWWGCC*PGLGWGRDTARQCC
Trigger: ACAGCACTGTCTAGCTGTGTCCCTGCCCCACCCTAGACCTGGCCAGCAACAGCCCCACCAGGCGGTCCTGAGCATGCGGAGATCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGACACCTTCGACACACTTaGTGGGGCAAGCCCGGCATC +
Preference number: 5 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRHLRHT*WGKPGI
Trigger: GATGCCGGGCTTGCCCCACAAAGTGTGTCGAAGGTG...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CAA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGACGTTCGCACAGCCGGTaGGACTTCACCATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRRSHSR*DFTISQ
Trigger: CTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACG...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS TCA 90 bp CCCCAGGCCACGGCTGAGGGCTGCTTCATCAGTGAAGAACTGTGGTaGGGAGCGCGCTGCGGTGGACAGCCAGGAGGTTACGGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: PQATAEGCFISEELW*GARCGGQPGGYGLL
Trigger: AAGCAAGCCGTAACCTCCTGGCTGTCCACCGCAGCGCGCTCCTCACCACAGTTCTTCACTGATGAAGCAGCCCTCAGCCGTGGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 90 bp CAGGGCCACCCAATGGTCCACCAGAACGCCACTGCCGCACCTTTATaGCCCGCGCCGTTCACTTTCCAGTCGCTCGCTTTCAGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: QGHPMVHQNATAAPL*PAPFTFQSLAFRWA
Trigger: GGCCCACCTGAAAGCGAGCGACTGGAAAGTGAACGGCGCGGGTCATAAAGGTGCGGCAGTGGCGTTCTGGTGGACCATTGGGTGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677996.1
ENST00000678381.1
CDS TCA 90 bp GACACCCCAGAGGAACAGGCTGACTCCACAGAAGCTGGCCGTGCCTaGAGGGCTGTGCCTGGCATGGCCTGTGACTCCTGGAGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: DTPEEQADSTEAGRA*RAVPGMACDSWRSL
Trigger: CAGGCTTCTCCAGGAGTCACAGGCCATGCCAGGCACAGCCCTTCAGGCACGGCCAGCTTCTGTGGAGTCAGCCTGTTCCTCTGGGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS TCA 90 bp CCCTCTCTCGGGCGCCCTCAGGGAGTGAGTCTTGTGGGCAGTGAGTaGGGCCAGCAGGGTGACAGCCTTTGCACTTTGGCCAGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: PSLGRPQGVSLVGSE*GQQGDSLCTLASEC
Trigger: GCACTCACTGGCCAAAGTGCAAAGGCTGTCACCCTGCTGGCCTCACTCACTGCCCACAAGACTCACTCCCTGAGGGCGCCCGAGAGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp ACCTATATGTGGCCATGCCTGCTTACCCTCGGGGAGTGGGAGAGATaGCCCACAATTCCTGCCCCTCTCGGACGGTCCTGGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: TYMWPCLLTLGEWER*PTIPAPLGRSWPSL
Trigger: CAGGCTGGGCCAGGACCGTCCGAGAGGGGCAGGAATTGTGGGGCATCTCTCCCACTCCCCGAGGGTAAGCAGGCATGGCCACATATAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp GCCAGACTCTGCCCTCCAGGCACTCCTTTGCTGGACACAGCTGCCTaGCGTTCCCCGCCAGGAGGACCGTACCTTCGACACACTTTGTGG +
Preference number: 5 (lower is better)
Translates to: ARLCPPGTPLLDTAA*RSPPGGPYLRHTLW
Trigger: CCACAAAGTGTGTCGAAGGTACGGTCCTCCTGGCGGGGAACGGCAGGCAGCTGTGTCCAGCAAAGGAGTGCCTGGAGGGCAGAGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 90 bp TGGCCTGACCTTGGCAGGTGCACAGGCTCTGCCTTGTCGTTCAGGTaGAACCACCAACGTAGGCTCCGAGGCAAGAAGGGCGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: WPDLGRCTGSALSFR*NHQRRLRGKKGGLG
Trigger: TCCCAGCCCGCCCTTCTTGCCTCGGAGCCTACGTTGGTGGTTGCACCTGAACGACAAGGCAGAGCCTGTGCACCTGCCAAGGTCAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CCA 90 bp TTGTGGGCAGTGAGTGAGGCCAGCAGGGTGACAGCCTTTGCACTTTaGCCAGTGAGTGCGCTGTGGCTGGGAGCTCGAGGACGCCACGAG +
Preference number: 5 (lower is better)
Translates to: LWAVSEASRVTAFAL*PVSALWLGARGRHE
Trigger: CTCGTGGCGTCCTCGAGCTCCCAGCCACAGCGCACTCACTGGCCAAAGTGCAAAGGCTGTCACCCTGCTGGCCTCACTCACTGCCCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp CTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCCGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LSATWAGTSRVVHQWGVSRQRLF*SPQCRY
Trigger: GTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCG...GCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp ACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAAGGCCCGTCCACCGTCTaGCCGTCGTCGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: TYLFWGEPGCQNAEPCRQGPSTV*PSSSGP
Trigger: GGGGCCGGACGACGACGGCAAGACGGTGGACGGGCC...TTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAGGTGACAGGGCAGCCTaGGGTGGCTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: HGNKESSACSKESAAGDRGDRAA*GGSSSG
Trigger: CCCAGAGCTGGAGCCACCCAAGGCTGCCCTGTCACC...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATGGTGACAGGGCAGCCTaGGGTGGCTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDGDRAA*GGSSSG
Trigger: CCCAGAGCTGGAGCCACCCAAGGCTGCCCTGTCACC...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCGGTGACAGGGCAGCCTaGGGTGGCTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPGDRAA*GGSSSG
Trigger: CCCAGAGCTGGAGCCACCCAAGGCTGCCCTGTCACC...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGACCGGCGACAGCGTCTaGCTGCTGTGTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLTGDSV*LLCPQS
Trigger: ACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGGT...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGACCGGCGACAGCGTCTaGCTGCTGTGTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRTGDSV*LLCPQS
Trigger: ACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGGT...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGACAGGTCTCACACCCCTaGTGGCACCGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGQVSHP*WHRRQR
Trigger: ACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTG...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGCACCTTCGACACACTTaGTGGGGCAAGCCCGGCATC +
Preference number: 5 (lower is better)
Translates to: AVRCRAPLLKQTLADSLEHLRHT*WGKPGI
Trigger: GATGCCGGGCTTGCCCCACAAAGTGTGTCGAAGGTG...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
CDS-3UTR CAA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGTTGCTGCACGTGTGGTaGGTGATGCAGGAGGTCCCC +
Preference number: 5 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWLLHVW*VMQEVP
Trigger: GGGGACCTCCTGCATCACCAACCACACGTGCAGCAA...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGTTGCTGCACGTGTGGTaGGTGATGCAGGAGGTCCCC +
Preference number: 5 (lower is better)
Translates to: AVRCRAPLLKQTLADSLELLHVW*VMQEVP
Trigger: GGGGACCTCCTGCATCACCAACCACACGTGCAGCAA...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCACGTTCGCACAGCCGGTaGGACTTCACCATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: EDGPGFASWAGEIYYTAARSHSR*DFTISQ
Trigger: CTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACG...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGCGTTCGCACAGCCGGTaGGACTTCACCATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: AVRCRAPLLKQTLADSLERSHSR*DFTISQ
Trigger: CTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACG...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAACACCACCCACCTGGCTaGGGTGCTCAGAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: VRCRAPLLKQTLADSLEEHHPPG*GAQRCC
Trigger: GCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTG...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGCAAGGAGAGCTCGGCTaGCTCAAAGGAGAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRQGELG*LKGERC
Trigger: GCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTG...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTACCTTCGACACACTTaGTGGGGCAAGCCCGGCATC +
Preference number: 5 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTYLRHT*WGKPGI
Trigger: GATGCCGGGCTTGCCCCACAAAGTGTGTCGAAGGTA...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 90 bp CCAGGTAGATCTGGAGGTCTCCTCGGCGTGGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCAAGTAGACCACCCGCTGGTCCGAGT +
Preference number: 5 (lower is better)
Translates to: PGRSGGLLGVGVRWR*EPPRAPSRPPAGPS
Trigger: ACTCGGACCAGCGGGTGGTCTACTTGGAGCACGTGGTGGTTCGCACCTCCATCTCACACCCACGCCGAGGAGACCTCCAGATCTACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 90 bp TGCTGCCAGACTCTGCCCTCCAGGCACTCCTTTGCTGGACACAGCTaGCTGCCGTTCCCCGCCAGGAGGACCGTACCTTCGACACACTTT +
Preference number: 5 (lower is better)
Translates to: CCQTLPSRHSFAGHS*LPFPARRTVPSTHF
Trigger: AAAGTGTGTCGAAGGTACGGTCCTCCTGGCGGGGAACGGCAGGCAGCTGTGTCCAGCAAAGGAGTGCCTGGAGGGCAGAGTCTGGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 90 bp GAGTGCTCCGCGCAGGCGCTGGTCAGGGCCGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCAGAGATTTGAAAGATGGTTCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ECSAQALVRAVVRST*TKGMLRDLKDGSAG
Trigger: CCCAGCCGAACCATCTTTCAAATCTCTGAGCATCCCCTTAGTGCAGGTGCTGCGGACTACGGCCCTGACCAGCGCCTGCGCGGAGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676598.1
CDS CCA 90 bp GAGTGGGAGAGATGCCCCACAATTCCTGCCCCTCTCGGACGGTCCTaGCCCAGCCTGCGCAGAGATGGACACCAGCCAGGGCTATTTCTA +
Preference number: 5 (lower is better)
Translates to: EWERCPTIPAPLGRS*PSLRRDGHQPGLFL
Trigger: TAGAAATAGCCCTGGCTGGTGTCCATCTCTGCGCAGGCTGGGCCAGGACCGTCCGAGAGGGGCAGGAATTGTGGGGCATCTCTCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS-3UTR CAA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGAATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATGGTGACAGGGCAGCCTaGGGTGGCTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHGDRAA*GGSSSG
Trigger: CCCAGAGCTGGAGCCACCCAAGGCTGCCCTGTCACC...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGTTGCGGTGACAGGGCAGCCTaGGGTGGCTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VRTAGWTSPSRRMSRQRCGDRAA*GGSSSG
Trigger: CCCAGAGCTGGAGCCACCCAAGGCTGCCCTGTCACC...GCAACGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGTGATGCAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTGGTGACAGGGCAGCCTaGGGTGGCTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GDAGGPQLCEARLTPATVGDRAA*GGSSSG
Trigger: CCCAGAGCTGGAGCCACCCAAGGCTGCCCTGTCACC...AACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTGCATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAAAGCACTGGTCTGCATaGGGGCCATCACAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRKHWSA*GPSQPL
Trigger: CAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTT...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGCAGGTCTCACACCCCTaGTGGCACCGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSQVSHP*WHRRQR
Trigger: ACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTG...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATCAGGTCTCACACCCCTaGTGGCACCGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDQVSHP*WHRRQR
Trigger: ACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTG...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAATTGCTGCACGTGTGGTaGGTGATGCAGGAGGTCCCC +
Preference number: 5 (lower is better)
Translates to: VRCRAPLLKQTLADSLEELLHVW*VMQEVP
Trigger: GGGGACCTCCTGCATCACCAACCACACGTGCAGCAA...TTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCAAGGAGAGCTCGGCTaGCTCAAAGGAGAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKQGELG*LKGERC
Trigger: GCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTG...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAACAGAATGCCTCCTGTaGCCTCTCCTCAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRTECLL*PLLRRL
Trigger: GAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGT...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGTACCTTCGACACACTTaGTGGGGCAAGCCCGGCATC +
Preference number: 5 (lower is better)
Translates to: GCMLSATWAGTSRVVHQWYLRHT*WGKPGI
Trigger: GATGCCGGGCTTGCCCCACAAAGTGTGTCGAAGGTA...CCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GCCTGCCCTCTGTGGGCAGCTAGGCACCCTTACCCGGCCAGGAGGCACGTGCGGTGCCTGGCCCTTGTTTaGCCCTTGCATTTTAATGCT +
Preference number: 5 (lower is better)
Translates to: ACPLWAARHPYPARRHVRCLALV*PLHFNA
Trigger: AGCATTAAAATGCAAGGGCAAAACAAGGGCCAGGCA...CCGCACGTGCCTCCTGGCCGGGTAAGGGTGCCTAGCTGCCCACAGAGGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS TCA 90 bp CGAGGGAGAAACCAGGTAGATCTGGAGGTCTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCACCACGTGCTCCAAGTAGACCACCCG +
Preference number: 5 (lower is better)
Translates to: RGRNQVDLEVSSAWV*DGGANHHVLQVDHP
Trigger: CGGGTGGTCTACTTGGAGCACGTGGTGGTTCGCACCTCCATCTCACACCCACGCCGAGGAGACCTCCAGATCTACCTGGTTTCTCCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS TCA 90 bp GGTGGGCATCGCCATCACCATTTCACAGACGGGGACATCGAGGCATaGGATGATCTCAGAGGGAGCACACCTGCCCACTGGCCGTGCCAC +
Preference number: 5 (lower is better)
Translates to: GGHRHHHFTDGDIEA*DDLRGSTPAHWPCH
Trigger: GTGGCACGGCCAGTGGGCAGGTGTGCTCCCTCTGAGATCATCTCATGCCTCGATGTCCCCGTCTGTGAAATGGTGATGGCGATGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560785.1
CDS TCA 90 bp CCCAGGCCTTTGGGGAGCCTAGCAGTGTCCTGTCATCGTGGCCTCTaGGGCCTGGCACATGCGGGGCATAATGGGTGCTCAGGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: PRPLGSLAVSCHRGL*GLAHAGHNGCSGKF
Trigger: AAACTTCCCTGAGCACCCATTATGCCCCGCATGTGCCAGGCCTCAGAGGCCACGATGACAGGACACTGCTAGGCTCCCCAAAGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 90 bp AACTGTCGGCTCTGGCAAAACCCTCTCTCGGGCGCCCTCAGGGAGTaGGTCTTGTGGGCAGTGAGTGAGGCCAGCAGGGTGACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: NCRLWQNPLSGALRE*VLWAVSEASRVTAF
Trigger: AAAGGCTGTCACCCTGCTGGCCTCACTCACTGCCCACAAGACTCACTCCCTGAGGGCGCCCGAGAGAGGGTTTTGCCAGAGCCGACAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp GACCATTGTGCCCTCTACAGAAAGCACTTGCCGATGCGGGCCGAGTaGTTGAAGGAGCACGTTTCCCATCCTGGGGCCGTGAGTGCACCC +
Preference number: 5 (lower is better)
Translates to: DHCALYRKHLPMRAE*LKEHVSHPGAVSAP
Trigger: GGGTGCACTCACGGCCCCAGGATGGGAAACGTGCTCCTTCAAGCACTCGGCCCGCATCGGCAAGTGCTTTCTGTAGAGGGCACAATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp AAGCTCGATTCCTGCAGAGCACTTTGCATGCATCCGGCATGCCCATaGGGGCCCCAGGTCATGAGGAGGTGCAGGGACCTTCCTGCACCT +
Preference number: 5 (lower is better)
Translates to: KLDSCRALCMHPACP*GPQVMRRCRDLPAP
Trigger: AGGTGCAGGAAGGTCCCTGCACCTCCTCATGACCTGGGGCCCCCATGGGCATGCCGGATGCATGCAAAGTGCTCTGCAGGAATCGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS-3UTR CAA 90 bp AGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCCTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SATWAGTSRVVHQWGVSTLLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...GGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: ECLLLPLLRRLCIRSRWSMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...CGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHLGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGACCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: HGNKESSACSKESAAGDRPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: QEVPSCVKPVLHLLQFLLPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...CAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAAGCACTGGTCTGCATaGGGGCCATCACAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVKHWSA*GPSQPL
Trigger: CAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTT...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAAAGCACTGGTCTGCATaGGGGCCATCACAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAKHWSA*GPSQPL
Trigger: CAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTT...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGACACTTCCTGCTGGTCTaGACACTCCCCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGHFLLV*TLPRLK
Trigger: CTTCAGCCTGGGGAGTGTCAAGACCAGCAGGAAGTG...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAACCGGCGACAGCGTCTaGCTGCTGTGTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKTGDSV*LLCPQS
Trigger: ACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGGT...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGACACCTTCGACACACTTaGTGGGGCAAGCCCGGCATC +
Preference number: 5 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGHLRHT*WGKPGI
Trigger: GATGCCGGGCTTGCCCCACAAAGTGTGTCGAAGGTG...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
CDS-3UTR CAA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAATTGCTGCACGTGTGGTaGGTGATGCAGGAGGTCCCC +
Preference number: 5 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKLLHVW*VMQEVP
Trigger: GGGGACCTCCTGCATCACCAACCACACGTGCAGCAA...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACACCACCCACCTGGCTaGGGTGCTCAGAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTHHPPG*GAQRCC
Trigger: GCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTG...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGCACCACCCACCTGGCTaGGGTGCTCAGAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRHHPPG*GAQRCC
Trigger: GCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTG...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS TCA 90 bp GCTCAAGCAGTTCTCGTCACACCTGTGGGAAGATACCGTTCCTGCTaGAGTCTGGGGAAGAGGCTCCACCACTCCGGGCTCCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: AQAVLVTPVGRYRSC*SLGKRLHHSGLPSQ
Trigger: CTGGGAAGGGAGCCCGGAGTGGTGGAGCCTCTTCCCCAGACTTCAGCAGGAACGGTATCTTCCCACAGGTGTGACGAGAACTGCTTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp TCGCTCGCTTTCAGGTGGGCCGGCCGGGATGTCTTCACTAGCAGGTaGTGGACGTCCCTCCAGGTTAACTGGCTGTTTGCTTCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: SLAFRWAGRDVFTSR*WTSLQVNWLFASRA
Trigger: GGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000677996.1
CDS GCA 90 bp GGGATGCTCCTGGGTCTCTTGTCCGAGGCGGCCACACACATGTGCTaGGATGGCACTGCTGTCCACTTCTTTGCCTCCACAACGAGAGCT +
Preference number: 5 (lower is better)
Translates to: GMLLGLLSEAATHMC*DGTAVHFFASTTRA
Trigger: AGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 90 bp CTCGAGCTGACCAGAAGGCTGCTGTCACCTATATGTGGCCATGCCTaGTTACCCTCGGGGAGTGGGAGAGATGCCCCACAATTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LELTRRLLSPICGHA*LPSGSGRDAPQFLP
Trigger: GGGCAGGAATTGTGGGGCATCTCTCCCACTCCCCGAGGGTAAGCAGGCATGGCCACATATAGGTGACAGCAGCCTTCTGGTCAGCTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp AAAGCCAAGCTCGATTCCTGCAGAGCACTTTGCATGCATCCGGCATaGCCATGGGGGCCCCAGGTCATGAGGAGGTGCAGGGACCTTCCT +
Preference number: 5 (lower is better)
Translates to: KAKLDSCRALCMHPA*PWGPQVMRRCRDLP
Trigger: AGGAAGGTCCCTGCACCTCCTCATGACCTGGGGCCCCCATGGGCATGCCGGATGCATGCAAAGTGCTCTGCAGGAATCGAGCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 90 bp TTCCTACACATTCCAGGGCCACCCAATGGTCCACCAGAACGCCACTaGCGCACCTTTATGACCCGCGCCGTTCACTTTCCAGTCGCTCGC +
Preference number: 5 (lower is better)
Translates to: FLHIPGPPNGPPERH*RTFMTRAVHFPVAR
Trigger: GCGAGCGACTGGAAAGTGAACGGCGCGGGTCATAAAGGTGCGGCAGTGGCGTTCTGGTGGACCATTGGGTGGCCCTGGAATGTGTAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677996.1
ENST00000678381.1
CDS CCA 90 bp GCTCCTGGGTCTCTTGTCCGAGGCGGCCACACACATGTGCTGCGATaGCACTGCTGTCCACTTCTTTGCCTCCACAACGAGAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: APGSLVRGGHTHVLR*HCCPLLCLHNESFC
Trigger: GCAGAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 90 bp GAGAAACCAGGTAGATCTGGAGGTCTCCTCGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGTGCTCCAAGTAGACCACCCGCTGGT +
Preference number: 5 (lower is better)
Translates to: EKPGRSGGLLGVGVR*RCEPPRAPSRPPAG
Trigger: ACCAGCGGGTGGTCTACTTGGAGCACGTGGTGGTTCGCACCTCCATCTCACACCCACGCCGAGGAGACCTCCAGATCTACCTGGTTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 90 bp CTCCGCTGCTCTGGAGCCCCAGGTGCAGCATCGCTTCAGCCTGGGTaGGAGGTGGGTTTTATTCCTAGTGTGTCTGAGGATGCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: LRCSGAPGAASLQPG*EVGFIPSVSEDAEP
Trigger: AGGCTCAGCATCCTCAGACACACTAGGAATAAAACCCACCTCCCACCCAGGCTGAAGCGATGCTGCACCTGGGGCTCCAGAGCAGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp CAGTTCTCGTCACACCTGTGGGAAGATACCGTTCCTGCTGAAGTCTaGGGAAGAGGCTCCACCACTCCGGGCTCCCTTCCCAGAACCCTC +
Preference number: 5 (lower is better)
Translates to: QFSSHLWEDTVPAEV*GRGSTTPGSLPRTL
Trigger: GAGGGTTCTGGGAAGGGAGCCCGGAGTGGTGGAGCCTCTTCCCCAGACTTCAGCAGGAACGGTATCTTCCCACAGGTGTGACGAGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp GAGGACAGCACCAGGGCCTTGAATCGCATCCGTCTCCAGGCCCTCTaGGGCAGCCTTGGCACGCCCAACATGACCCACTTCTCTTTAACA +
Preference number: 5 (lower is better)
Translates to: EDSTRALNRIRLQAL*GSLGTPNMTHFSLT
Trigger: TGTTAAAGAGAAGTGGGTCATGTTGGGCGTGCCAAGGCTGCCCCAGAGGGCCTGGAGACGGATGCGATTCAAGGCCCTGGTGCTGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 90 bp GCCATATACGTGGGGTCCCAGGTCAGAGCTCCTGATATCCTCCCTTaGGGTAAACTCAGCCTCATGGGCTCTCTGGGGAGGTGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: AIYVGSQVRAPDILP*GKLSLMGSLGRCQE
Trigger: CTCCTGGCACCTCCCCAGAGAGCCCATGAGGCTGAGTTTACCCCAAGGGAGGATATCAGGAGCTCTGACCTGGGACCCCACGTATATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp CTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCTCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: LSATWAGTSRVVHQWGVSSFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...GCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCATGCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: EDGPGFASWAGEIYYTAACRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGCA...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGTGCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVCRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGCA...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCCGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASRQRLF*SPQCRY
Trigger: GTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCG...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCCTCCTATTTTGGCATaGTACGCTATGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHPPILA*YAMPTM
Trigger: CATCGTGGGCATAGCGTACAATGCCAAAATAGGAGG...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGCTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVLLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCACTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: EDGPGFASWAGEIYYTAALGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: ATWAGTSRVVHQWGVSTLLGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...CAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: QVQGAAPETDSGRQSGGRLGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...CCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATAAGCACTGGTCTGCATaGGGGCCATCACAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDKHWSA*GPSQPL
Trigger: CAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTT...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGCACTTCCTGCTGGTCTaGACACTCCCCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGHFLLV*TLPRLK
Trigger: CTTCAGCCTGGGGAGTGTCAAGACCAGCAGGAAGTG...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCCACTTCCTGCTGGTCTaGACACTCCCCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCHFLLV*TLPRLK
Trigger: CTTCAGCCTGGGGAGTGTCAAGACCAGCAGGAAGTG...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp TATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCCACTTCCTGCTGGTCTaGACACTCCCCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: YRQCKGCMLSATWAGTSRHFLLV*TLPRLK
Trigger: CTTCAGCCTGGGGAGTGTCAAGACCAGCAGGAAGTG...GCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACACTTCCTGCTGGTCTaGACACTCCCCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAHFLLV*TLPRLK
Trigger: CTTCAGCCTGGGGAGTGTCAAGACCAGCAGGAAGTG...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGCACCTTCGACACACTTaGTGGGGCAAGCCCGGCATC +
Preference number: 5 (lower is better)
Translates to: TEHGNKESSACSKESAAGHLRHT*WGKPGI
Trigger: GATGCCGGGCTTGCCCCACAAAGTGTGTCGAAGGTG...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
CDS-3UTR CAA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAAATGTCTCGTCAGCGTaGCTGCACGTGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGNVSSA*LHVWLV
Trigger: CACCAACCACACGTGCAGCAACGCTGACGAGACATT...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACGTTCGCACAGCCGGTaGGACTTCACCATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTRSHSR*DFTISQ
Trigger: CTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACG...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATCGTTCGCACAGCCGGTaGGACTTCACCATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDRSHSR*DFTISQ
Trigger: CTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACG...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGACAGAATGCCTCCTGTaGCCTCTCCTCAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKTECLL*PLLRRL
Trigger: GAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGT...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGACTGGTCAATTGGTGCTaGTGGTGGCCAGCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGLVNWC*WWPAVG
Trigger: CCCAACAGCTGGCCACCACAAGCACCAATTGACCAG...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS TCA 90 bp CCCACACCTGCCCTTGCACATTCTGGTGGCCCAGCCACCAAACCCTaGTGCCCCAGTACAGGTTATGACTTTCCCCACAGACCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: PTPALAHSGGPATKP*CPSTGYDFPHRPSG
Trigger: ACCAGAGGGTCTGTGGGGAAAGTCATAACCTGTACTGGGGCATCAGGGTTTGGTGGCTGGGCCACCAGAATGTGCAAGGGCAGGTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 90 bp GGCTCCGAGGCAAGAAGGGCGGGCTGGGAAGGCTCCTCTCTTCAGTaGCTTGGTCTGGGTCTCACTTCTGCACAGCCCTATCTTACAGGA +
Preference number: 5 (lower is better)
Translates to: GSEARRAGWEGSSLQ*LGLGLTSAQPYLTG
Trigger: TCCTGTAAGATAGGGCTGTGCAGAAGTGAGACCCAGACCAAGTCACTGAAGAGAGGAGCCTTCCCAGCCCGCCCTTCTTGCCTCGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 90 bp AAGGGGATGCTCCTGGGTCTCTTGTCCGAGGCGGCCACACACATGTaGTGCGATGGCACTGCTGTCCACTTCTTTGCCTCCACAACGAGA +
Preference number: 5 (lower is better)
Translates to: KGMLLGLLSEAATHM*CDGTAVHFFASTTR
Trigger: TCTCGTTGTGGAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCATCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 90 bp TGTGGTGAGGAGCGCGCTGCGGTGGACAGCCAGGAGGTTACGGCTTaGTTGCTTCTTCAAATACAACCTCACCCAGCTCAGCAGGATGGC +
Preference number: 5 (lower is better)
Translates to: CGEERAAVDSQEVTA*LLLQIQPHPAQQDG
Trigger: GCCATCCTGCTGAGCTGGGTGAGGTTGTATTTGAAGAAGCAAGCAAGCCGTAACCTCCTGGCTGTCCACCGCAGCGCGCTCCTCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp ACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTaGTTCCCATCTTATCCCGCTGCTGCACGGTGTCTGCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: TSRVVHQWGVSTLLF*FPSYPAAARCLPTA
Trigger: TGCTGTGGGCAGACACCGTGCAGCAGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 90 bp CTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACCCACGCAGGTTCCGCAG +
Preference number: 5 (lower is better)
Translates to: LCEARLTPATVPAGA*TAQAVLVTPTQVPQ
Trigger: CTGCGGAACCTGCGTGGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677528.1
CDS CCA 90 bp CTCGCTTTCAGGTGGGCCGGCCGGGATGTCTTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAACTGGCTGTTTGCTTCTAGAGCCAAG +
Preference number: 5 (lower is better)
Translates to: LAFRWAGRDVFTSRC*TSLQVNWLFASRAK
Trigger: CTTGGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAAGACATCCCGGCCGGCCCACCTGAAAGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000677996.1
CDS CCA 90 bp GGTGACTCTTCGACACACTTTGTGGGGCAAGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACAGGCTGGCACACACTTCCAGTCGTG +
Preference number: 5 (lower is better)
Translates to: GDSSTHFVGQARHLF*VEALTTGWHTLPVV
Trigger: CACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAGAGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557794.5
CDS CCA 90 bp GCTCTGGAGCCCCAGGTGCAGCATCGCTTCAGCCTGGGTGGGAGGTaGGTTTTATTCCTAGTGTGTCTGAGGATGCTGAGCCTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: ALEPQVQHRFSLGGR*VLFLVCLRMLSLEL
Trigger: GAGCTCTAGGCTCAGCATCCTCAGACACACTAGGAATAAAACCCACCTCCCACCCAGGCTGAAGCGATGCTGCACCTGGGGCTCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp ACACACCTGACTCGAGCTGACCAGAAGGCTGCTGTCACCTATATGTaGCCATGCCTGCTTACCCTCGGGGAGTGGGAGAGATGCCCCACA +
Preference number: 5 (lower is better)
Translates to: THLTRADQKAAVTYM*PCLLTLGEWERCPT
Trigger: TGTGGGGCATCTCTCCCACTCCCCGAGGGTAAGCAGGCATGGCCACATATAGGTGACAGCAGCCTTCTGGTCAGCTCGAGTCAGGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp ACCGTACCTTCGACACACTTTGTGGGGCAAGCCCGGCATCTCTTCTaGGTAGAAGCCCTCACCACAGGCTGGCACACACTTCCAGTCGTG +
Preference number: 5 (lower is better)
Translates to: TVPSTHFVGQARHLF*VEALTTGWHTLPVV
Trigger: CACGACTGGAAGTGTGTGCCAGCCTGTGGTGAGGGCTTCTACCCAGAAGAGATGCCGGGCTTGCCCCACAAAGTGTGTCGAAGGTACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS CCA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATaGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCTTATCCCGCT +
Preference number: 5 (lower is better)
Translates to: MLSATWAGTSRVVHQ*GVSTLLFCFPSYPA
Trigger: AGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS CCA 90 bp CAAGGAAACACCCCTCACACCCATGCCTACCCAGCAGACCCGGCATaGGGCAGGTGTGCAGACAAGGTAAGTGTGTGCTGCATGAACAGG +
Preference number: 5 (lower is better)
Translates to: QGNTPHTHAYPADPA*GRCADKVSVCCMNR
Trigger: CCTGTTCATGCAGCACACACTTACCTTGTCTGCACACCTGCCCCATGCCGGGTCTGCTGGGTAGGCATGGGTGTGAGGGGTGTTTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CCA 90 bp AGGAGGGCACACTCATCACAGAAGGGTCAGCCTGAACCGGGCAACTaGCCATATACGTGGGGTCCCAGGTCAGAGCTCCTGATATCCTCC +
Preference number: 5 (lower is better)
Translates to: RRAHSSQKGQPEPGN*PYTWGPRSELLISS
Trigger: GGAGGATATCAGGAGCTCTGACCTGGGACCCCACGTATATGGCCAGTTGCCCGGTTCAGGCTGACCCTTCTGTGATGAGTGTGCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp ATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGTCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: MLSATWAGTSRVVHQWGVSFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...CACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCCGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPRQRLF*SPQCRY
Trigger: GTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCG...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGCCTCCTATTTTGGCATaGTACGCTATGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: AVRCRAPLLKQTLADSLEPPILA*YAMPTM
Trigger: CATCGTGGGCATAGCGTACAATGCCAAAATAGGAGG...CTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCACCTCCTATTTTGGCATaGTACGCTATGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAPPILA*YAMPTM
Trigger: CATCGTGGGCATAGCGTACAATGCCAAAATAGGAGG...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp CAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCACGGATGCCTCCTATTTaGGCATTGTACGCTATGCCC +
Preference number: 5 (lower is better)
Translates to: QRMHAERDMGRDVPRSPPRMPPI*ALYAMP
Trigger: GGGCATAGCGTACAATGCCAAAATAGGAGGCATCCG...TGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCAGGCCCGTCCACCGTCTaGCCGTCGTCGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: PVSLSEDWSQQAAFERISGPSTV*PSSSGP
Trigger: GGGGCCGGACGACGACGGCAAGACGGTGGACGGGCC...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKLGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCTAAGGGGATGCTCTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKLRGCS*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAAGAGCATCCCCTTAG...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398185.6
CDS-3UTR CAA 90 bp GTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCATTCTTTCAACTTCCCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: VQRMHAERDMGRDVPRSPFFQLP*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAA...TGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGATTCTTTCAACTTCCCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGFFQLP*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAA...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTAAAGCACTGGTCTGCATaGGGGCCATCACAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLKHWSA*GPSQPL
Trigger: CAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTT...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCACCGGCGACAGCGTCTaGCTGCTGTGTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: VPRSPPMGCEHLAILLPITGDSV*LLCPQS
Trigger: ACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGGT...GATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCCATCGGGGTACCTTTaGGCTGGCCACAGAATGCCT +
Preference number: 5 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASPSGYL*AGHRMP
Trigger: AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGG...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGCCATCGGGGTACCTTTaGGCTGGCCACAGAATGCCT +
Preference number: 5 (lower is better)
Translates to: TEHGNKESSACSKESAAGPSGYL*AGHRMP
Trigger: AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGG...CCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGTTTTGTTCAGAGGAATaGCTTGGCCATCGGGGTACC +
Preference number: 5 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWFCSEE*LGHRGT
Trigger: GGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAA...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTATGGGGTGTGAGCACCTaGCTATTCTGCTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVWGVST*LFCFPS
Trigger: AGATGGGAAGCAGAATAGCAAGGTGCTCACACCCCA...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS TCA 90 bp CTGGCCCCACGCAGGTTCCGCAGGTGTGATGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGTAGGTGCCTGGCTCACAGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: LAPRRFRRCDGIPHI*SALSQSRCLAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCCATCACACCTGCGGAACCTGCGTGGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677962.1
ENST00000679007.1
CDS TCA 90 bp GCTGGCACACACTTCCAGTCGTGGAAGTGGAAGTTTTTCGCACAGTaGATGCACTCTTCTCTGCCTGGCCCCACGCAGGTTCCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: AGTHFQSWKWKFFAQ*MHSSLPGPTQVPQV
Trigger: CACCTGCGGAACCTGCGTGGGGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGTGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677962.1
ENST00000679007.1
CDS TCA 90 bp TCCAGGCCAGACTCCACCCAGGGATGTGACACACCTGACTCGAGCTaGCCAGAAGGCTGCTGTCACCTATATGTGGCCATGCCTGCTTAC +
Preference number: 5 (lower is better)
Translates to: SRPDSTQGCDTPDSS*PEGCCHLYVAMPAY
Trigger: GTAAGCAGGCATGGCCACATATAGGTGACAGCAGCCTTCTGGTCAGCTCGAGTCAGGTGTGTCACATCCCTGGGTGGAGTCTGGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp CTTGACACTCCCCAGGCTGAAGTGGACGCAGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCCTTTGTCACCACACTCCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: LDTPQAEVDAVQALV*IGAITAFVTTLRMA
Trigger: TGCCATCCGGAGTGTGGTGACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAGTGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000398185.6
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS GCA 90 bp CTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACCCCATCGTCACACCCTC +
Preference number: 5 (lower is better)
Translates to: LCEARLTPATVPAGA*TAQAVLVTPHRHTL
Trigger: GAGGGTGTGACGATGGGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557794.5
CDS GCA 90 bp CTGACTCGAGCTGACCAGAAGGCTGCTGTCACCTATATGTGGCCATaGCTGCTTACCCTCGGGGAGTGGGAGAGATGCCCCACAATTCCT +
Preference number: 5 (lower is better)
Translates to: LTRADQKAAVTYMWP*LLTLGEWERCPTIP
Trigger: AGGAATTGTGGGGCATCTCTCCCACTCCCCGAGGGTAAGCAGGCATGGCCACATATAGGTGACAGCAGCCTTCTGGTCAGCTCGAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp CCGCGAGCGGGACTGATGGGCACTGAAGGTGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAGGCTCCATTCTTTCAACTTCCCGCT +
Preference number: 5 (lower is better)
Translates to: PRAGLMGTEGVVRVL*CAIQYEAPFFQLPA
Trigger: AGCGGGAAGTTGAAAGAATGGAGCCTCATACTGTATGGCACAGCAGAGCACCCGTACCACACCTTCAGTGCCCATCAGTCCCGCTCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632686.1
CDS GCA 90 bp CTGGGAAGGCTCCTCTCTTCAGTGACTTGGTCTGGGTCTCACTTCTaGACAGCCCTATCTTACAGGAGAGGAGACCCAGCGCAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: LGRLLSSVTWSGSHF*TALSYRRGDPAQRP
Trigger: TGGCCTCTGCGCTGGGTCTCCTCTCCTGTAAGATAGGGCTGTGCAGAAGTGAGACCCAGACCAAGTCACTGAAGAGAGGAGCCTTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 90 bp CCAGCAGACCCGGCATGGGGCAGGTGTGCAGACAAGGTAAGTGTGTaGTGCATGAACAGGAGAACACCATGCAGATGCCCCTTAGTGCTG +
Preference number: 5 (lower is better)
Translates to: PADPAWGRCADKVSV*CMNRRTPCRCPLVL
Trigger: CAGCACTAAGGGGCATCTGCATGGTGTTCTCCTGTTCATGCAGCACACACTTACCTTGTCTGCACACCTGCCCCATGCCGGGTCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CCA 90 bp CTGGTCTTGACACTCCCCAGGCTGAAGTGGACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCACAGCCTTTGTCACCACACTCCGGA +
Preference number: 5 (lower is better)
Translates to: LVLTLPRLKWTQFKH*SALGPSQPLSPHSG
Trigger: TCCGGAGTGTGGTGACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAGTGTCAAGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000398185.6
ENST00000559605.1
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS CCA 90 bp ACACTCACGCACTTCCTGCTGGTCTTGACACTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGGTCTGCATTGGGGCCATCACAGCCT +
Preference number: 5 (lower is better)
Translates to: TLTHFLLVLTLPRLK*TQFKHWSALGPSQP
Trigger: AGGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAGTGTCAAGACCAGCAGGAAGTGCGTGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000559605.1
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 90 bp TTCCTGCTGGAGCCTGCACAGCTCAAGCAGTTCTCGTCACACCTGTaGGAAGATACCGTTCCTGCTGAAGTCTGGGGAAGAGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: FLLEPAQLKQFSSHL*EDTVPAEVWGRGST
Trigger: GGTGGAGCCTCTTCCCCAGACTTCAGCAGGAACGGTATCTTCCCACAGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp AGGTTCCCTTGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTCTCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: RFPCFSGLRTWDGRS*ISKVHCPSAFSPQQ
Trigger: CTGCTGGGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS CCA 90 bp CAAGAAGGGCGGGCTGGGAAGGCTCCTCTCTTCAGTGACTTGGTCTaGGTCTCACTTCTGCACAGCCCTATCTTACAGGAGAGGAGACCC +
Preference number: 5 (lower is better)
Translates to: QEGRAGKAPLFSDLV*VSLLHSPILQERRP
Trigger: GGGTCTCCTCTCCTGTAAGATAGGGCTGTGCAGAAGTGAGACCCAGACCAAGTCACTGAAGAGAGGAGCCTTCCCAGCCCGCCCTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CCA 90 bp CGAGGCAAGAAGGGCGGGCTGGGAAGGCTCCTCTCTTCAGTGACTTaGTCTGGGTCTCACTTCTGCACAGCCCTATCTTACAGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: RGKKGGLGRLLSSVT*SGSHFCTALSYRRG
Trigger: TCCTCTCCTGTAAGATAGGGCTGTGCAGAAGTGAGACCCAGACCAAGTCACTGAAGAGAGGAGCCTTCCCAGCCCGCCCTTCTTGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CCA 90 bp AAGGAATTCATGACACCCCTTCCTACACATTCCAGGGCCACCCAATaGTCCACCAGAACGCCACTGCCGCACCTTTATGACCCGCGCCGT +
Preference number: 5 (lower is better)
Translates to: KEFMTPLPTHSRATQ*STRTPLPHLYDPRR
Trigger: ACGGCGCGGGTCATAAAGGTGCGGCAGTGGCGTTCTGGTGGACCATTGGGTGGCCCTGGAATGTGTAGGAAGGGGTGTCATGAATTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677996.1
ENST00000678381.1
CDS CCA 90 bp CGGGACATGCATTACCTGCTGGTCTTGACACTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGGTCTGCATTGGGGCCATCACAGCCT +
Preference number: 5 (lower is better)
Translates to: RDMHYLLVLTLPRLK*TQFKHWSALGPSQP
Trigger: AGGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAGTGTCAAGACCAGCAGGTAATGCATGTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp GCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCCGGATGCCTCCTATTTaGGCATTGTACGCTATGCCC +
Preference number: 5 (lower is better)
Translates to: AGTSRVVHQWGVSTLLFCRMPPI*ALYAMP
Trigger: GGGCATAGCGTACAATGCCAAAATAGGAGGCATCCG...GCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCGATCCAGCAACCTCTTaGCCAGAAGTTGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: QCKGCMLSATWAGTSRVVDPATS*PEVETW
Trigger: CCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATC...GACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp ACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTTTCAACTTCCCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: TWAGTSRVVHQWGVSTLLFFQLP*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAA...TAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp TTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGGTGACAGGGCAGCCTaGGGTGGCTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LTFWSGQFFVMGAAVHCRGDRAA*GGSSSG
Trigger: CCCAGAGCTGGAGCCACCCAAGGCTGCCCTGTCACC...CCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CAA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTAAGCACTGGTCTGCATaGGGGCCATCACAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSKHWSA*GPSQPL
Trigger: CAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTT...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000632686.1
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTACCGGCGACAGCGTCTaGCTGCTGTGTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVTGDSV*LLCPQS
Trigger: ACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGGT...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCACAGGTCTCACACCCCTaGTGGCACCGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: GFSDYRQCKGCMLSATWAQVSHP*WHRRQR
Trigger: ACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTG...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp AGGCTAACGTGGTCTGAAGGGGTCTCTTTGCCCAGTGACATTCTGGGGTTGGGACACCTTCGACACACTTaGTGGGGCAAGCCCGGCATC +
Preference number: 5 (lower is better)
Translates to: RLTWSEGVSLPSDILGLGHLRHT*WGKPGI
Trigger: GATGCCGGGCTTGCCCCACAAAGTGTGTCGAAGGTG...TCCCAACCCCAGAATGTCACTGGGCAAAGAGACCCCTTCAGACCACGTTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp CCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATACAGAATGCCTCCTGTaGCCTCTCCTCAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: PLLKQTLADSLEEGGRMDTECLL*PLLRRL
Trigger: GAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGT...ATCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGACAGAATGCCTCCTGTaGCCTCTCCTCAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLTECLL*PLLRRL
Trigger: GAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGT...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGTTCAGAGGAATTGCTaGGCCATCGGGGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGVQRNC*AIGVPF
Trigger: AAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAGGCTGGCTTTACATTTaGTTCAGAGGAATTGCTTGG +
Preference number: 5 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRGWLYI*FRGIAW
Trigger: CCAAGCAATTCCTCTGAACAAAATGTAAAGCCAGCC...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCCACATTCCAGAAGCCCTCCTCCTGTCTTCATCTAGTCACCACCCTTGCCCCATGCCAAATGTCCCCGTaGCTGCACGTGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ATFQKPSSCLHLVTTLAPCQMSP*LHVWLV
Trigger: CACCAACCACACGTGCAGCAACGGGGACATTTGGCA...TGGGGCAAGGGTGGTGACTAGATGAAGACAGGAGGAGGGCTTCTGGAATGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp GGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGAAAGATGCTGGAGGTCTaGTCATTTGTCCCATCAACT +
Preference number: 5 (lower is better)
Translates to: GPLSHVRMAQGSPAGPGRKMLEV*SFVPST
Trigger: AGTTGATGGGACAAATGACAAGACCTCCAGCATCTT...TCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGACACAACTCTGGTCAATaGGTGCTTGTGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HGNKESSACSKESAAGDRHNSGQ*VLVVAS
Trigger: GCTGGCCACCACAAGCACCAATTGACCAGAGTTGTG...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp TTTCAACCAGCTCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTGCGATCTTCCAATCCAGCAGATaGGCTCCTCGCTCCTTCCGA +
Preference number: 5 (lower is better)
Translates to: FQPAHPACTQPVSGRAAIFQSSR*APRSFR
Trigger: TCGGAAGGAGCGAGGAGCCAATCTGCTGGATTGGAA...GATCGCAGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGAGCTGGTTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS TCA 90 bp GCAGGTTCCGCAGGTGTGATGGCATTCCCCACATCTGATCAGCTCTaGGTCAAAGTAGGTGCCTGGCTCACAGTCAGGAATGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: AGSAGVMAFPTSDQL*VKVGAWLTVRNAAA
Trigger: GGCAGCTGCATTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCCATCACACCTGCGGAACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS TCA 90 bp TTCCCTGACACAGGGGCTGAGTGTCTGCATGTCTTTTCTCCTGTCTaGCCTCACTATTGCCCTGGGAGGGCAGAGACAGCCATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: FPDTGAECLHVFSPV*PHYCPGRAETAMAS
Trigger: ACTGGCCATGGCTGTCTCTGCCCTCCCAGGGCAATAGTGAGGTCAGACAGGAGAAAAGACATGCAGACACTCAGCCCCTGTGTCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 90 bp GCACGGTGTCTGCCCACAGCAGGGACCCAACAAATATGCATCCAGTaGACAAAGGGACGAAGGCCCCTCAGCAGCTCTGTAAATGGGCTC +
Preference number: 5 (lower is better)
Translates to: ARCLPTAGTQQICIQ*TKGRRPLSSSVNGL
Trigger: GAGCCCATTTACAGAGCTGCTGAGGGGCCTTCGTCCCTTTGTTCACTGGATGCATATTTGTTGGGTCCCTGCTGTGGGCAGACACCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS TCA 90 bp GGGCATCAGGACATGGAGGGGCTAAGGATACAACTGGAAAGTCACTaGGTGGTGAGCCACAGGGCTGCGGGACATGCATTACCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: GHQDMEGLRIQLESH*VVSHRAAGHALPAG
Trigger: ACCAGCAGGTAATGCATGTCCCGCAGCCCTGTGGCTCACCACTCAGTGACTTTCCAGTTGTATCCTTAGCCCCTCCATGTCCTGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 90 bp GAGGCCTGGCACATGCGGGGCATAATGGGTGCTCAGGGAAGTTTGTaGAATGAGAATGGACAACAGGGCAGCTGCAGGACTGGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: EAWHMRGIMGAQGSL*NENGQQGSCRTGRE
Trigger: TTCCCTGCCAGTCCTGCAGCTGCCCTGTTGTCCATTCTCATTTCACAAACTTCCCTGAGCACCCATTATGCCCCGCATGTGCCAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 90 bp CTGAGGGTGCGCATGGTTTCCCAAGGGCATCGTGAGGTTCGTATTTaGCTTTTGGAACTGTCGGCTCTGGCAAAACCCTCTCTCGGGCGC +
Preference number: 5 (lower is better)
Translates to: LRVRMVSQGHREVRI*LLELSALAKPSLGR
Trigger: GCGCCCGAGAGAGGGTTTTGCCAGAGCCGACAGTTCCAAAAGTCAAATACGAACCTCACGATGCCCTTGGGAAACCATGCGCACCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp CCGCGAGCGGGACTGATGGGCACTGAAGGTGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAGGCTCCATTCTTTCAACTTCCCTTG +
Preference number: 5 (lower is better)
Translates to: PRAGLMGTEGVVRVL*CAIQYEAPFFQLPL
Trigger: CAAGGGAAGTTGAAAGAATGGAGCCTCATACTGTATGGCACAGCAGAGCACCCGTACCACACCTTCAGTGCCCATCAGTCCCGCTCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398185.6
ENST00000558951.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 90 bp CCGCGAGCGGGACTGATGGGCACTGAAGGTGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAGGCTCCATTCTTTCAACTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PRAGLMGTEGVVRVL*CAIQYEAPFFQLPS
Trigger: AGAGGGAAGTTGAAAGAATGGAGCCTCATACTGTATGGCACAGCAGAGCACCCGTACCACACCTTCAGTGCCCATCAGTCCCGCTCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560902.5
CDS GCA 90 bp GCTGTCATGAGATTCCCAAGAGCCACTGACCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGATCTTGGATTTCCAAGGTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: AVMRFPRATDLASPG*GPGMADLGFPRSTA
Trigger: GGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTCAGTGGCTCTTGGGAATCTCATGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS GCA 90 bp CACCGGAACACGTGTTTTAGTCCAGGTTCCCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGATCTTGGATTTCCAAGGTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: HRNTCFSPGSLASPG*GPGMADLGFPRSTA
Trigger: GGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAACCTGGACTAAAACACGTGTTCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS CCA 90 bp AGATCACCTTGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTCTCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: RSPCFSGLRTWDGRS*ISKVHCPSAFSPQQ
Trigger: CTGCTGGGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611967.4
ENST00000676494.1
CDS CCA 90 bp GCAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: ATGVSRSPCFSGLRT*DGRSWISKVHCPSA
Trigger: GGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611967.4
ENST00000676494.1
CDS CCA 90 bp AACTTCCCTTGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTCTCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: NFPCFSGLRTWDGRS*ISKVHCPSAFSPQQ
Trigger: CTGCTGGGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 90 bp TCCCAAGAGCCACTGACCTTGCTTCTCCGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SQEPLTLLLRVADLG*QILDFQGPLPFSLF
Trigger: GAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTCAGTGGCTCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS CCA 90 bp ATAGGCAGGGCTTGGAGCTTTGTTGTGCTCATGCCTGGGCCTCCCTaGGGGGCAGTTCTTTGCTTTATACAGATGTCCCCTCCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: IGRAWSFVVLMPGPP*GAVLCFIQMSPPCC
Trigger: ACAGCAGGGAGGGGACATCTGTATAAAGCAAAGAACTGCCCCCCAGGGAGGCCCAGGCATGAGCACAACAAAGCTCCAAGCCCTGCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp TCATCACAGAAGGGTCAGCCTGAACCGGGCAACTGGCCATATACGTaGGGTCCCAGGTCAGAGCTCCTGATATCCTCCCTTGGGGTAAAC +
Preference number: 5 (lower is better)
Translates to: SSQKGQPEPGNWPYT*GPRSELLISSLGVN
Trigger: GTTTACCCCAAGGGAGGATATCAGGAGCTCTGACCTGGGACCCCACGTATATGGCCAGTTGCCCGGTTCAGGCTGACCCTTCTGTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 90 bp TGCGCATGGTTTCCCAAGGGCATCGTGAGGTTCGTATTTGACTTTTaGAACTGTCGGCTCTGGCAAAACCCTCTCTCGGGCGCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: CAWFPKGIVRFVFDF*NCRLWQNPLSGALR
Trigger: CCTGAGGGCGCCCGAGAGAGGGTTTTGCCAGAGCCGACAGTTCCAAAAGTCAAATACGAACCTCACGATGCCCTTGGGAAACCATGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCTGCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPCRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGCA...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp ATGAAGTTTCAACCAGCTCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTCGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: MKFQPAHPACTQPVSGRARQRLF*SPQCRY
Trigger: GTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCG...AGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGAGCTGGTTGAAACTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CAA 90 bp CATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTTGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: HAERDMGRDVPRSPPMGCCSRNC*LKQQLL
Trigger: GAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCA...ACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACACGGATGCCTCCTATTTaGGCATTGTACGCTATGCCC +
Preference number: 5 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTRMPPI*ALYAMP
Trigger: GGGCATAGCGTACAATGCCAAAATAGGAGGCATCCG...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp TCCTGGGGAGATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGCTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SWGDKAVRCRAPLLKQTLLLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...CAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATCTCCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCCCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVAPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTCCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: PQNASCCLSSEGSASGRGPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GAGCGCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACTTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: ERDMGRDVPRSPPMGCEHFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...GTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASLGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGTGCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: TFWSGQFFVMGAAVHCRVPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...CACCCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CAA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTCTTTCAACTTCCCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: ARLAQRRALRGIESSGLAFFQLP*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAA...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTAATGTCTCGTCAGCGTaGCTGCACGTGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PQNASCCLSSEGSASGRGNVSSA*LHVWLV
Trigger: CACCAACCACACGTGCAGCAACGCTGACGAGACATT...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGACGTTCGCACAGCCGGTaGGACTTCACCATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: GSLQLTGDKANALSSNRGRSHSR*DFTISQ
Trigger: CTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACG...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCGTTCAGAGGAATTGCTaGGCCATCGGGGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASVQRNC*AIGVPF
Trigger: AAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGGTTCAGAGGAATTGCTaGGCCATCGGGGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARVQRNC*AIGVPF
Trigger: AAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATGGATTTTGTTCAGAGGAATaGCTTGGCCATCGGGGTACC +
Preference number: 5 (lower is better)
Translates to: AAPETDSGRQSGGRWTDGFCSEE*LGHRGT
Trigger: GGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAA...TCCATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGGCTGGCTTTACATTTaGTTCAGAGGAATTGCTTGG +
Preference number: 5 (lower is better)
Translates to: EDGPGFASWAGEIYYTAAGWLYI*FRGIAW
Trigger: CCAAGCAATTCCTCTGAACAAAATGTAAAGCCAGCC...TGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGCCCTATTCAAGGGAATaGATCAAGCAGATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: VQGAAPETDSGRQSGGRWPYSRE*IKQICA
Trigger: TGCACAGATCTGCTTGATCAATTCCCTTGAATAGGG...CCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGTGGAGGTCTTGTCATTaGTCCCATCAACTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GPGFASWAGEIYYTAAEKWRSCH*SHQLEK
Trigger: CTTCTCCAGTTGATGGGACAAATGACAAGACCTCCA...CTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGTTGGGTTGTGTGACTaGCCCTGCCTTCTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: PQNASCCLSSEGSASGRGVGLCD*PCLLRA
Trigger: AGCTCTCAGAAGGCAGGGCAAGTCACACAACCCAAC...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTTGGCCAGCTGTTGGGTaGTGTGACTTGCCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVWPAVG*CDLPCL
Trigger: AAGGCAGGGCAAGTCACACAACCCAACAGCTGGCCA...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp TTTCAACCAGCTCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTGCGATCCCCCACTGCCTCCACTaGCAAAATGACAGTGACACA +
Preference number: 5 (lower is better)
Translates to: FQPAHPACTQPVSGRAAIPHCLH*QNDSDT
Trigger: TGTGTCACTGTCATTTTGCAAGTGGAGGCAGTGGGG...GATCGCAGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGAGCTGGTTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS TCA 90 bp TGTCGCCACAATGCAGGTACCACATGTTGGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGTCACTTCGCACCTGTCTCTTCACCC +
Preference number: 5 (lower is better)
Translates to: CRHNAGTTCWTKWGR*SKGPAGHFAPVSSP
Trigger: GGGTGAAGAGACAGGTGCGAAGTGACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGTCCAACATGTGGTACCTGCATTGTGGCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
ENST00000678918.1
CDS TCA 90 bp TGGCGTAGGAATCCAGGTACCACATGTTGGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGTCACTTCGCACCTGTCTCTTCACCC +
Preference number: 5 (lower is better)
Translates to: WRRNPGTTCWTKWGR*SKGPAGHFAPVSSP
Trigger: GGGTGAAGAGACAGGTGCGAAGTGACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGTCCAACATGTGGTACCTGGATTCCTACGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS TCA 90 bp ACTCACCCACGCAGGTTCCGCAGGTGTGATGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGTAGGTGCCTGGCTCACAGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: THPRRFRRCDGIPHI*SALSQSRCLAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCCATCACACCTGCGGAACCTGCGTGGGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS TCA 90 bp TCACACCCACGCAGGTTCCGCAGGTGTGATGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGTAGGTGCCTGGCTCACAGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: SHPRRFRRCDGIPHI*SALSQSRCLAHSQE
Trigger: TTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCCATCACACCTGCGGAACCTGCGTGGGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677528.1
CDS GCA 90 bp GGGTTGCGGACCTGGGATGGCAGATCTTGGATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCCCAGCAGTGGACAGTCATGAATTCC +
Preference number: 5 (lower is better)
Translates to: GLRTWDGRSWISKVH*PSAFSPQQWTVMNS
Trigger: GGAATTCATGACTGTCCACTGCTGGGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 90 bp CTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACAGACAATGCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: LCEARLTPATVPAGA*TAQAVLVTQTMPLV
Trigger: CACCAGTGGCATTGTCTGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559430.1
CDS GCA 90 bp CTGTGTGAAGCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACCTGTGGGAAGATACCGT +
Preference number: 5 (lower is better)
Translates to: LCEARLTPATVPAGA*TAQAVLVTPVGRYR
Trigger: ACGGTATCTTCCCACAGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGCTTCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 90 bp GGGTGTGAGCACCTTGCTATTCTGCTTCCCATCTTATCCCGCTGCTaGACGGTGTCTGCCCACAGCAGGGACCCAACAAATATGCATCCA +
Preference number: 5 (lower is better)
Translates to: GCEHLAILLPILSRC*TVSAHSRDPTNMHP
Trigger: TGGATGCATATTTGTTGGGTCCCTGCTGTGGGCAGACACCGTGCAGCAGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCTCACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 90 bp ATTGATGTCTCACAATTCTCCCTGGCAGGGGAAGACTGTGGGAGGTaGCCCAGCACCTTAGGTAGGCTCCTGGTTACAAAGGGAGGGCTA +
Preference number: 5 (lower is better)
Translates to: IDVSQFSLAGEDCGR*PSTLGRLLVTKGGL
Trigger: TAGCCCTCCCTTTGTAACCAGGAGCCTACCTAAGGTGCTGGGGCACCTCCCACAGTCTTCCCCTGCCAGGGAGAATTGTGAGACATCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 90 bp GTGAACCCCTTTCAGAGCTGTGTGTATCCACGAGGACACTCTAGATaGTGTTCCTGGGCGGTGCTGGTATCCTGGGTTCCAGATGCCACT +
Preference number: 5 (lower is better)
Translates to: VNPFQSCVYPRGHSR*CSWAVLVSWVPDAT
Trigger: AGTGGCATCTGGAACCCAGGATACCAGCACCGCCCAGGAACAGCATCTAGAGTGTCCTCGTGGATACACACAGCTCTGAAAGGGGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 90 bp AGGCTCCATTCTTTCAACTTCCCTTGCTTCTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: RLHSFNFPCFSGLRT*DGRSWISKVHCPSA
Trigger: GGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAATGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS-3UTR CAA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCCCAATCTGGCCCAAGTaGAGGTACCCGTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSPIWPK*RYPCAA
Trigger: GGCGGCGCACGGGTACCTCAACTTGGGCCAGATTGG...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTTCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASSFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATTGCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHCRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGCA...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPRQRLF*SPQCRY
Trigger: GTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCG...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCCCTCCTATTTTGGCATaGTACGCTATGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPPPILA*YAMPTM
Trigger: CATCGTGGGCATAGCGTACAATGCCAAAATAGGAGG...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGCGGATGCCTCCTATTTaGGCATTGTACGCTATGCCC +
Preference number: 5 (lower is better)
Translates to: RLAQRRALRGIESSGLALRMPPI*ALYAMP
Trigger: GGGCATAGCGTACAATGCCAAAATAGGAGGCATCCG...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTGGCCCGTCCACCGTCTaGCCGTCGTCGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSGPSTV*PSSSGP
Trigger: GGGGCCGGACGACGACGGCAAGACGGTGGACGGGCC...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp GACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: DVPRSPPMGCEHLAILLPRLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...GGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp ACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: TCEDGPGFASWAGEIYYTRLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...TGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCCTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: IAWPSGYLLAGHRMPPVALLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...GGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCCCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGCCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: SDYRQCKGCMLSATWAGTPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...CGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp GCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTGATCCAGCAACCTCTTaGCCAGAAGTTGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: ARLAQRRALRGIESSGLADPATS*PEVETW
Trigger: CCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATC...AGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: QTEHGNKESSACSKESAALGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGACACTTCCTGCTGGTCTaGACACTCCCCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GSLQLTGDKANALSSNRGHFLLV*TLPRLK
Trigger: CTTCAGCCTGGGGAGTGTCAAGACCAGCAGGAAGTG...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTCAGGTCTCACACCCCTaGTGGCACCGGCGACAGCGT +
Preference number: 5 (lower is better)
Translates to: KLMVPEAAPKPELWIPRIQVSHP*WHRRQR
Trigger: ACGCTGTCGCCGGTGCCACAAGGGGTGTGAGACCTG...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTGCCTCTGTTCAGAGGAATTGCTaGGCCATCGGGGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: AWPSGYLLAGHRMPPVASVQRNC*AIGVPF
Trigger: AAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC...AGAGGCAACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGATTTTGTTCAGAGGAATaGCTTGGCCATCGGGGTACC +
Preference number: 5 (lower is better)
Translates to: HGNKESSACSKESAAGDRFCSEE*LGHRGT
Trigger: GGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAA...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGAGGCTGGCTTTACATTTaGTTCAGAGGAATTGCTTGG +
Preference number: 5 (lower is better)
Translates to: CRAPLLKQTLADSLEEGGGWLYI*FRGIAW
Trigger: CCAAGCAATTCCTCTGAACAAAATGTAAAGCCAGCC...TCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCTGGGGTGTGAGCACCTaGCTATTCTGCTTCCCATCT +
Preference number: 5 (lower is better)
Translates to: DYRQCKGCMLSATWAGTSWGVST*LFCFPS
Trigger: AGATGGGAAGCAGAATAGCAAGGTGCTCACACCCCA...GGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp AGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCACGGCTAATTCAATCACACTaGGCAGCAACCGGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: RVRQLGRGDLLHSRRKARLIQSH*AATGEE
Trigger: CTCTTCACCGGTTGCTGCCAAGTGTGATTGAATTAG...CCGTGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS TCA 90 bp CTGGCACATGCGGGGCATAATGGGTGCTCAGGGAAGTTTGTGAAATaGGAATGGACAACAGGGCAGCTGCAGGACTGGCAGGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LAHAGHNGCSGKFVK*EWTTGQLQDWQGRE
Trigger: TTCTCTTCCCTGCCAGTCCTGCAGCTGCCCTGTTGTCCATTCTCATTTCACAAACTTCCCTGAGCACCCATTATGCCCCGCATGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 90 bp CTGCTGGAAGGTCCTGAGGGTGCGCATGGTTTCCCAAGGGCATCGTaGGGTTCGTATTTGACTTTTGGAACTGTCGGCTCTGGCAAAACC +
Preference number: 5 (lower is better)
Translates to: LLEGPEGAHGFPRAS*GSYLTFGTVGSGKT
Trigger: GGTTTTGCCAGAGCCGACAGTTCCAAAAGTCAAATACGAACCTCACGATGCCCTTGGGAAACCATGCGCACCCTCAGGACCTTCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp ATGGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCTTATCCCGCTaGTGCACGGTGTCTGCCCACAGCAGGGACCCAACAAATATGCAT +
Preference number: 5 (lower is better)
Translates to: MGCEHLAILLPILSR*CTVSAHSRDPTNMH
Trigger: ATGCATATTTGTTGGGTCCCTGCTGTGGGCAGACACCGTGCAGCAGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCTCACACCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 90 bp AAAGTTGGAAACAGGAACGATGTCTGTCAAACACCCATTTCTAGCTaGCCGGCAGCGGTGACACCCCAGAGGAACAGGCTGACTCCACAG +
Preference number: 5 (lower is better)
Translates to: KVGNRNDVCQTPISS*PAAVTPQRNRLTPQ
Trigger: CTGTGGAGTCAGCCTGTTCCTCTGGGGTGTCACCGCTGCCGGGCAGCTAGAAATGGGTGTTTGACAGACATCGTTCCTGTTTCCAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS GCA 90 bp GAGGCTGGAACAGCTGTTTCATTCACTCACTTGCACCAGTCATCATaGTGGGACCAGCCAGCACCTTTGACTTCCACGTGGAGGACAGAG +
Preference number: 5 (lower is better)
Translates to: EAGTAVSFTHLHQSS*WDQPAPLTSTWRTE
Trigger: CTCTGTCCTCCACGTGGAAGTCAAAGGTGCTGGCTGGTCCCAGCATGATGACTGGTGCAAGTGAGTGAATGAAACAGCTGTTCCAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp AAACAAGCATTGCCTTTCATCCAGAGAGACGCCTTCTCCATCTACTaGAGTCCCGCGGATCCCTGTGTCAGGATATCGCAGCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: KQALPFIQRDAFSIY*SPADPCVRISQLGR
Trigger: CCTGCCAAGCTGCGATATCCTGACACAGGGATCCGCGGGACTGCAGTAGATGGAGAAGGCGTCTCTCTGGATGAAAGGCAATGCTTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp TCTTCACTAGCAGGTGCTGGACGTCCCTCCAGGTTAACTGGCTGCTaGAATGACACAACACACCCTAGAGTCCACACAGCTCAACAACGG +
Preference number: 5 (lower is better)
Translates to: SSLAGAGRPSRLTGC*NDTTHPRVHTAQQR
Trigger: CCGTTGTTGAGCTGTGTGGACTCTAGGGTGTGTTGTGTCATTGCAGCAGCCAGTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678381.1
CDS CCA 90 bp AGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: RSLKITLLLRVADLG*QILDFQGPLPFSLF
Trigger: GAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611967.4
ENST00000676494.1
CDS CCA 90 bp GGCTTGCTTGCTTCTTCAAATACAACCTCACCCAGCTCAGCAGGATaGCAGGGGCCTCGGTTTTCCATTGCTCTAACCAGGTTGCCACAC +
Preference number: 5 (lower is better)
Translates to: GLLASSNTTSPSSAG*QGPRFSIALTRLPH
Trigger: GTGTGGCAACCTGGTTAGAGCAATGGAAAACCGAGGCCCCTGCCATCCTGCTGAGCTGGGTGAGGTTGTATTTGAAGAAGCAAGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 90 bp GTTTTAGTCCAGGTTCCCTTGCTTCTCCGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VLVQVPLLLRVADLG*QILDFQGPLPFSLF
Trigger: GAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAACCTGGACTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CAA 90 bp TGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTGGTCGTTCAGGCCATTCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: CCLSSEGSASGRGGRSGHSFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...ATGGCCTGAACGACCACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTGCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNACRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGCA...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp CGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCGTACCGTGTTTATTTTCATaGCTGGCATCATATCGTGGA +
Preference number: 5 (lower is better)
Translates to: RQCKGCMLSATWAGTSRVPCLFS*LASYRG
Trigger: TCCACGATATGATGCCAGCAATGAAAATAAACACGG...TACGCGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGACCGTGTTTATTTTCATaGCTGGCATCATATCGTGGA +
Preference number: 5 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGPCLFS*LASYRG
Trigger: TCCACGATATGATGCCAGCAATGAAAATAAACACGG...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGCSRNC*LKQQLL
Trigger: GAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCA...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp TGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAATGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: WPRVRQLGRGDLLHSRRKCSRNC*LKQQLL
Trigger: GAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCA...TTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCCGGATGCCTCCTATTTaGGCATTGTACGCTATGCCC +
Preference number: 5 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNARMPPI*ALYAMP
Trigger: GGGCATAGCGTACAATGCCAAAATAGGAGGCATCCG...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCGGCCCGTCCACCGTCTaGCCGTCGTCGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: KTILRKNHQVGGLALSYFGPSTV*PSSSGP
Trigger: GGGGCCGGACGACGACGGCAAGACGGTGGACGGGCC...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: RLAQRRALRGIESSGLALRLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTCTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVLLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: VYGDCLESVPSSSALFPRMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp TGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: WTSKGSQSSKCGGFGHLSPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...GGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp AAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCTGTGGATTCCCAGAATTCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: KLMVPEAAPKPELWIPRIPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...AATTCTGGGAATCCACAGCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAACCGGCGACAGCGTCTaGCTGCTGTGTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKTGDSV*LLCPQS
Trigger: ACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGGT...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGTTGCTGCACGTGTGGTaGGTGATGCAGGAGGTCCCC +
Preference number: 5 (lower is better)
Translates to: LTFWSGQFFVMGAAVHCRLLHVW*VMQEVP
Trigger: GGGGACCTCCTGCATCACCAACCACACGTGCAGCAA...CCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAAATGTCTCGTCAGCGTaGCTGCACGTGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GSLQLTGDKANALSSNRGNVSSA*LHVWLV
Trigger: CACCAACCACACGTGCAGCAACGCTGACGAGACATT...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCAACGAGCAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTTGTTCCTGTTAGTTaGTCGGAAGACTGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: GNEQVDCWPFVTCEDGPGFVPVS*SEDWSQ
Trigger: TTGGCTCCAGTCTTCCGACAAACTAACAGGAACAAA...CCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTGCTCGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TTCCGTTCGCACAGCCGGTTGGACTTCACCATCTCGCAGAATGTCTCGTCAGCGTTTTGTTCAGAGGAATaGCTTGGCCATCGGGGTACC +
Preference number: 5 (lower is better)
Translates to: FRSHSRLDFTISQNVSSAFCSEE*LGHRGT
Trigger: GGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAA...CGCTGACGAGACATTCTGCGAGATGGTGAAGTCCAACCGGCTGTGCGAACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CAGGTAGACTGCTGGCCCTTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCCCCTATTCAAGGGAATaGATCAAGCAGATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: QVDCWPFVTCEDGPGFASPYSRE*IKQICA
Trigger: TGCACAGATCTGCTTGATCAATTCCCTTGAATAGGG...GCTGGCGAACCCTGGGCCATCCTCACATGTGACAAAGGGCCAGCAGTCTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCCACATTCCAGAAGCCCTCCTCCTGTCTTCATCTAGTCACCACCCTTGCCCCAAAATGTCTCCAGACGTaGCCAAATGTCCCCGTTGCT +
Preference number: 5 (lower is better)
Translates to: ATFQKPSSCLHLVTTLAPKCLQT*PNVPVA
Trigger: AGCAACGGGGACATTTGGCAACGTCTGGAGACATTT...TGGGGCAAGGGTGGTGACTAGATGAAGACAGGAGGAGGGCTTCTGGAATGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS TCA 90 bp AGAGGCTTGAGATACAAAAGCTGTCATGAGATTCCCAAGAGCCACTaGCCTTGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTTGG +
Preference number: 5 (lower is better)
Translates to: RGLRYKSCHEIPKSH*PCFSGLRTWDGRSW
Trigger: CCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTCAGTGGCTCTTGGGAATCTCATGACAGCTTTTGTATCTCAAGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS TCA 90 bp TTCTGGTGGCCCAGCCACCAAACCCTGATGCCCCAGTACAGGTTATaGCTTTCCCCACAGACCCTCTGGTTTCTCTTACAGACAATGCCA +
Preference number: 5 (lower is better)
Translates to: FWWPSHQTLMPQYRL*LSPQTLWFLLQTMP
Trigger: TGGCATTGTCTGTAAGAGAAACCAGAGGGTCTGTGGGGAAAGTCATAACCTGTACTGGGGCATCAGGGTTTGGTGGCTGGGCCACCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 90 bp ACCTGGGAATCCTTTCTTTTCAAAGCTGGCCCTGCTGGAAGGTCCTaGGGGTGCGCATGGTTTCCCAAGGGCATCGTGAGGTTCGTATTT +
Preference number: 5 (lower is better)
Translates to: TWESFLFKAGPAGRS*GCAWFPKGIVRFVF
Trigger: AAATACGAACCTCACGATGCCCTTGGGAAACCATGCGCACCCTCAGGACCTTCCAGCAGGGCCAGCTTTGAAAAGAAAGGATTCCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp GTTGATTTGCAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGATCTTGGATTTCCAAGGTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: VDLQQESQDHLASPG*GPGMADLGFPRSTA
Trigger: GGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611967.4
ENST00000676494.1
CDS GCA 90 bp CAACCCCAGGCCTGTCTGATGTCTCTCTTCTGTGGTCAGTTGATTTaGAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: QPQACLMSLFCGQLI*NRSLKITLLLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGACATCAGACAGGCCTGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CCA 90 bp CCATTCTTTCAACTTCCCTTGCTTCTCCGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: PFFQLPLLLRVADLG*QILDFQGPLPFSLF
Trigger: GAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 90 bp TTTCAGAGCTGTGTGTATCCACGAGGACACTCTAGATGCTGTTCCTaGGCGGTGCTGGTATCCTGGGTTCCAGATGCCACTCACCATTTC +
Preference number: 5 (lower is better)
Translates to: FQSCVYPRGHSRCCS*AVLVSWVPDATHHF
Trigger: GAAATGGTGAGTGGCATCTGGAACCCAGGATACCAGCACCGCCCAGGAACAGCATCTAGAGTGTCCTCGTGGATACACACAGCTCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 90 bp GCTGGAACAGCTGTTTCATTCACTCACTTGCACCAGTCATCATGCTaGGACCAGCCAGCACCTTTGACTTCCACGTGGAGGACAGAGCAA +
Preference number: 5 (lower is better)
Translates to: AGTAVSFTHLHQSSC*DQPAPLTSTWRTEQ
Trigger: TTGCTCTGTCCTCCACGTGGAAGTCAAAGGTGCTGGCTGGTCCCAGCATGATGACTGGTGCAAGTGAGTGAATGAAACAGCTGTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp GTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTCCAATCTGGCCCAAGTaGAGGTACCCGTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: VTNLKAGTEGMCFKSVFLPIWPK*RYPCAA
Trigger: GGCGGCGCACGGGTACCTCAACTTGGGCCAGATTGG...AAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATCCAATCTGGCCCAAGTaGAGGTACCCGTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYPIWPK*RYPCAA
Trigger: GGCGGCGCACGGGTACCTCAACTTGGGCCAGATTGG...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp ATGAAGTTTCAACCAGCTCACCCGGCATGCACGCAGCCAGTAAGTGGGAGAGCTTCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: MKFQPAHPACTQPVSGRASFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...AGCTCTCCCACTTACTGGCTGCGTGCATGCCGGGTGAGCTGGTTGAAACTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CAA 90 bp AAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: KRTSFLKLRANLGKGFQEPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...CTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp TTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTTTCTTTCAACTTCCCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: FRGIAWPSGYLLAGHRMPFFQLP*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAA...AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTCACTTCCTGCTGGTCTaGACACTCCCCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RGYHHFRNTSLRATTHLAHFLLV*TLPRLK
Trigger: CTTCAGCCTGGGGAGTGTCAAGACCAGCAGGAAGTG...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGATTTGTTCCTGTTAGTTaGTCGGAAGACTGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: HGNKESSACSKESAAGDRFVPVS*SEDWSQ
Trigger: TTGGCTCCAGTCTTCCGACAAACTAACAGGAACAAA...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGAGGAAGGTGGACGGATTTCCCAGAATTCATTTaGTTCCTGTTAGTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: GAAPETDSGRQSGGRWTDFPEFI*FLLVCR
Trigger: CCGACAAACTAACAGGAACAAAATGAATTCTGGGAA...ATCCGTCCACCTTCCTCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCCAGAGCCAAGGAGAGCTCGGCTaGCTCAAAGGAGAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GLEDSVNLWSQKLLQSQSQGELG*LKGERC
Trigger: GCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTG...GCTCTGGCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCACCATCGGGGTACCTTTaGGCTGGCCACAGAATGCCT +
Preference number: 5 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPPSGYL*AGHRMP
Trigger: AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGG...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAACCATCGGGGTACCTTTaGGCTGGCCACAGAATGCCT +
Preference number: 5 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKPSGYL*AGHRMP
Trigger: AGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGG...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTTTTTGTTCAGAGGAATaGCTTGGCCATCGGGGTACC +
Preference number: 5 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVFCSEE*LGHRGT
Trigger: GGTACCCCGATGGCCAAGCAATTCCTCTGAACAAAA...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACAGGAGTTTAGTGACAAACTaGAAAGCCGGCACAGAAGGC +
Preference number: 5 (lower is better)
Translates to: IYSGANLAARMPNHAGNRSLVTN*KAGTEG
Trigger: GCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAAACT...CCTGTTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp AGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTCTGGACACTCATGTTTCATTTaGTGTGCCGTGGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: SCQVQGAAPETDSGRQSGHSCFI*CAVERN
Trigger: ATTTCTTTCCACGGCACACAAAATGAAACATGAGTG...TCCAGACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp TGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGAGTGACATTCTGGGGTaGGGATCTGGGATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: WVLSSSQVTRQMHCRQTGSDILG*GSGISS
Trigger: GGAGGAAATCCCAGATCCCAACCCCAGAATGTCACT...CCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAATGTGGTGGCCAGCTGTaGGGTTGTGTGACTTGCCCT +
Preference number: 5 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKCGGQL*GCVTCP
Trigger: AGGGCAAGTCACACAACCCAACAGCTGGCCACCACA...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS GCA 90 bp GACAAGGTAAGTGTGTGCTGCATGAACAGGAGAACACCATGCAGATaGCCCTTAGTGCTGACAAAGCCAAGCTCGATTCCTGCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: DKVSVCCMNRRTPCR*PLVLTKPSSIPAEH
Trigger: GTGCTCTGCAGGAATCGAGCTTGGCTTTGTCAGCACTAAGGGGCATCTGCATGGTGTTCTCCTGTTCATGCAGCACACACTTACCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 90 bp GCTGTGTGTATCCACGAGGACACTCTAGATGCTGTTCCTGGGCGGTaGTGGTATCCTGGGTTCCAGATGCCACTCACCATTTCTAAAACT +
Preference number: 5 (lower is better)
Translates to: AVCIHEDTLDAVPGR*WYPGFQMPLTISKT
Trigger: AGTTTTAGAAATGGTGAGTGGCATCTGGAACCCAGGATACCAGCACCGCCCAGGAACAGCATCTAGAGTGTCCTCGTGGATACACACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp GCTTCAGGAGTGAATGTCAAACATGATGCCCTTTGTCTTGGTGAGTaGAGTTCTGAGGTTCCTACGTACACAGGTGGAGAGGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: ASGVNVKHDALCLGE*SSEVPTYTGGEAGG
Trigger: GCCTCCAGCCTCTCCACCTGTGTACGTAGGAACCTCAGAACTGCACTCACCAAGACAAAGGGCATCATGTTTGACATTCACTCCTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp ATGTCTTCACTAGCAGGTGCTGGACGTCCCTCCAGGTTAACTGGCTaGTGCAATGACACAACACACCCTAGAGTCCACACAGCTCAACAA +
Preference number: 5 (lower is better)
Translates to: MSSLAGAGRPSRLTG*CNDTTHPRVHTAQQ
Trigger: TTGTTGAGCTGTGTGGACTCTAGGGTGTGTTGTGTCATTGCAGCAGCCAGTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678381.1
CDS CCA 90 bp TGGAAGAAAAACCTCCTCCTCCGAGGTGTGAGTTATGAGAGGGGATaGGGAGTGAGCTCAAGAGTAAAGACTAGTGAGTTGCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: WKKNLLLRGVSYERG*GVSSRVKTSELLAT
Trigger: GGTGGCCAGCAACTCACTAGTCTTTACTCTTGAGCTCACTCCCCATCCCCTCTCATAACTCACACCTCGGAGGAGGAGGTTTTTCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp GGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCCAATCTGGCCCAAGTaGAGGTACCCGTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: GHLSLCSISQRLPKLLFNPIWPK*RYPCAA
Trigger: GGCGGCGCACGGGTACCTCAACTTGGGCCAGATTGG...ATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CAA 90 bp TTTGTCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACCCGTGTTTATTTTCATaGCTGGCATCATATCGTGGA +
Preference number: 5 (lower is better)
Translates to: FVTCEDGPGFASWAGEIYPCLFS*LASYRG
Trigger: TCCACGATATGATGCCAGCAATGAAAATAAACACGG...GTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp TCACATGTGAGGATGGCCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACCGTGTTTATTTTCATaGCTGGCATCATATCGTGGA +
Preference number: 5 (lower is better)
Translates to: SHVRMAQGSPAGPGRFTTPCLFS*LASYRG
Trigger: TCCACGATATGATGCCAGCAATGAAAATAAACACGG...TGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGGCCATCCTCACATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp TTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAGGGACGTCCCGCCGTGTTTATTTTCATaGCTGGCATCATATCGTGGA +
Preference number: 5 (lower is better)
Translates to: LSTVQRMHAERDMGRDVPPCLFS*LASYRG
Trigger: TCCACGATATGATGCCAGCAATGAAAATAAACACGG...CGGGACGTCCCTGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp ACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAACCTCCTATTTTGGCATaGTACGCTATGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: TYLFWGEPGCQNAEPCRQPPILA*YAMPTM
Trigger: CATCGTGGGCATAGCGTACAATGCCAAAATAGGAGG...TTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCGGCCCGTCCACCGTCTaGCCGTCGTCGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSGPSTV*PSSSGP
Trigger: GGGGCCGGACGACGACGGCAAGACGGTGGACGGGCC...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCACCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCCCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GECAKFFSSVSKEVGVILPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp GATAAAGCTGTCAGGTGCAGGGCGCCGCTCCTGAAACAGACTCTGGCCGACAGTTTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: DKAVRCRAPLLKQTLADSFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...ACTGTCGGCCAGAGTCTGTTTCAGGAGCGGCGCCCTGCACCTGACAGCTTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGATTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: HGNKESSACSKESAAGDRFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...TCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGTGCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: TFWSGQFFVMGAAVHCRVLGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...CACCCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CAA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGAAGCACTGGTCTGCATaGGGGCCATCACAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: KQHLGSLQLTGDKANALSKHWSA*GPSQPL
Trigger: CAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTT...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TTTTACCTGGAAGATGCTGGAGGTCTTGTCATTTGTCCCATCAACTGGAGAAGGACCGGCGACAGCGTCTaGCTGCTGTGTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: FYLEDAGGLVICPINWRRTGDSV*LLCPQS
Trigger: ACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGGT...CCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTCCAGGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAAATGTCTCGTCAGCGTaGCTGCACGTGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKNVSSA*LHVWLV
Trigger: CACCAACCACACGTGCAGCAACGCTGACGAGACATT...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CCCAGGGTTCGCCAGCTGGGCCGGGGAGATTTACTACACAGCCGCAGAAAAGCATTCCCAGAATTCATTTaGTTCCTGTTAGTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: PRVRQLGRGDLLHSRRKAFPEFI*FLLVCR
Trigger: CCGACAAACTAACAGGAACAAAATGAATTCTGGGAA...TGCTTTTCTGCGGCTGTGTAGTAAATCTCCCCGGCCCAGCTGGCGAACCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CCTGTTAGTTTGTCGGAAGACTGGAGCCAACAAGCAGCATTTGAGAGGATATCACAAGGAGAGCTCGGCTaGCTCAAAGGAGAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PVSLSEDWSQQAAFERISQGELG*LKGERC
Trigger: GCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTG...TGATATCCTCTCAAATGCTGCTTGTTGGCTCCAGTCTTCCGACAAACTAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCTGGCTACAGAATGCCTCCTGTaGCCTCTCCTCAGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: RGYHHFRNTSLRATTHLATECLL*PLLRRL
Trigger: GAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGT...AGCCAGGTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACAGGGGAGTTCAGAGGAATTGCTaGGCCATCGGGGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: GSLQLTGDKANALSSNRGVQRNC*AIGVPF
Trigger: AAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC...TCCCCTGTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGTCCCTATTCAAGGGAATaGATCAAGCAGATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: PQNASCCLSSEGSASGRGPYSRE*IKQICA
Trigger: TGCACAGATCTGCTTGATCAATTCCCTTGAATAGGG...ACCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCCACAGAATGCCTCCTGTTGCCTCTCCTCAGAAGGCTCTGCATCAGGTCGAGGGCCCTTGTTTTGCCCTaGCATTTTAATGCTGCAATA +
Preference number: 5 (lower is better)
Translates to: ATECLLLPLLRRLCIRSRALVLP*HFNAAI
Trigger: TATTGCAGCATTAAAATGCAAGGGCAAAACAAGGGC...CCTCGACCTGATGCAGAGCCTTCTGAGGAGAGGCAACAGGAGGCATTCTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS GCA 90 bp TGTGCAGACAAGGTAAGTGTGTGCTGCATGAACAGGAGAACACCATaGAGATGCCCCTTAGTGCTGACAAAGCCAAGCTCGATTCCTGCA +
Preference number: 5 (lower is better)
Translates to: CADKVSVCCMNRRTP*RCPLVLTKPSSIPA
Trigger: TGCAGGAATCGAGCTTGGCTTTGTCAGCACTAAGGGGCATCTGCATGGTGTTCTCCTGTTCATGCAGCACACACTTACCTTGTCTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CCA 90 bp GTGTGTATCCACGAGGACACTCTAGATGCTGTTCCTGGGCGGTGCTaGTATCCTGGGTTCCAGATGCCACTCACCATTTCTAAAACTCAT +
Preference number: 5 (lower is better)
Translates to: VCIHEDTLDAVPGRC*YPGFQMPLTISKTH
Trigger: ATGAGTTTTAGAAATGGTGAGTGGCATCTGGAACCCAGGATACCAGCACCGCCCAGGAACAGCATCTAGAGTGTCCTCGTGGATACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp GGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGAAGTGGGAGTGATACTCCGGATGCCTCCTATTTaGGCATTGTACGCTATGCCC +
Preference number: 5 (lower is better)
Translates to: GECAKFFSSVSKEVGVILRMPPI*ALYAMP
Trigger: GGGCATAGCGTACAATGCCAAAATAGGAGGCATCCG...GAGTATCACTCCCACTTCCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCAAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: GFSDYRQCKGCMLSATWARLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp AAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGAGGCTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: KSKEMVSGLEVARSWEGRLLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...CCTCCCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CAA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCACTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPLLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGAGGAGGATCCAGCAACCTCTTaGCCAGAAGTTGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: IQRNGKWIRGCQELGGEEDPATS*PEVETW
Trigger: CCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATC...CTCCTCCCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CAA 90 bp CATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGTCAAACGATCCAGCAACCTCTTaGCCAGAAGTTGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: HLGSLQLTGDKANALSSNDPATS*PEVETW
Trigger: CCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATC...GTTTGACGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CGGCTTGCTCAAAGGAGAGCGCTGCGGGGGATAGAATCTTCTGGTCTGGCTTTGTTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: RLAQRRALRGIESSGLALFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...CAAAGCCAGACCAGAAGATTCTATCCCCCGCAGCGCTCTCCTTTGAGCAAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GCCCAAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCACTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: AQAYLIPKTEGKSGKGVSLGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...TGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATCACCACCCACCTGGCTaGGGTGCTCAGAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANHHPPG*GAQRCC
Trigger: GCAGCATCTCTGAGCACCCAAGCCAGGTGGGTGGTG...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CAGACAGAACACGGTAACAAGGAGAGCTCGGCTTGCTCAAAGGAGAGCGCTGCGGCCAACAAGCAGCATTaGAGAGGATATCACCATTTT +
Preference number: 5 (lower is better)
Translates to: QTEHGNKESSACSKESAAANKQH*RGYHHF
Trigger: AAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGC...CGCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTGTTACCGTGTTCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GTTCAGAGGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTTTGTTCCTGTTAGTTaGTCGGAAGACTGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: VQRNCLAIGVPFGWPQNAFVPVS*SEDWSQ
Trigger: TTGGCTCCAGTCTTCCGACAAACTAACAGGAACAAA...GGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCCTCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATCAAGGAGAGCTCGGCTaGCTCAAAGGAGAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYQGELG*LKGERC
Trigger: GCAGCGCTCTCCTTTGAGCAAGCCGAGCTCTCCTTG...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GGAATTGCTTGGCCATCGGGGTACCTTTTGGCTGGCCACAGAATGCCTCCTGTTCCCTATTCAAGGGAATaGATCAAGCAGATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: GIAWPSGYLLAGHRMPPVPYSRE*IKQICA
Trigger: TGCACAGATCTGCTTGATCAATTCCCTTGAATAGGG...AACAGGAGGCATTCTGTGGCCAGCCAAAAGGTACCCCGATGGCCAAGCAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATGCCGAACCATGCAGGCAAGTGTATGGTGACTGTTaGGAGAGTGTGCCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: TYLFWGEPGCQNAEPCRQVYGDC*ESVPSS
Trigger: AGAACTTGGCACACTCTCCAAACAGTCACCATACAC...TTGCCTGCATGGTTCGGCATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACATGTGCACAGCAGCAGTaGGTTGCATTTCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTCAQQQ*VAFLPE
Trigger: CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACA...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTTGTGCACAGCAGCAGTaGGTTGCATTTCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: LPKAAKVLNVVALVICPSCAQQQ*VAFLPE
Trigger: CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACA...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS TCA 90 bp CTGAATAAGACAGGTTGCCCTGCCCTGTTCTGGGTCCTGAGTTCATaGTCTCCCAACATAGGGCAATATTCAGCCAGAAAAGAGGAGACC +
Preference number: 5 (lower is better)
Translates to: LNKTGCPALFWVLSS*SPNIGQYSARKEET
Trigger: GGTCTCCTCTTTTCTGGCTGAATATTGCCCTATGTTGGGAGATCATGAACTCAGGACCCAGAACAGGGCAGGGCAACCTGTCTTATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557794.5
CDS TCA 90 bp TTTCCCCACAGACCCTCTGGTTTCTCTTACAGACAATGCCACTGGTaGGACGAGAACCAGGGCCGAGCTGAGTCATTTAAAGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: FPHRPSGFSYRQCHW*DENQGRAESFKEMS
Trigger: TGACATCTCTTTAAATGACTCAGCTCGGCCCTGGTTCTCGTCTCACCAGTGGCATTGTCTGTAAGAGAAACCAGAGGGTCTGTGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 90 bp CGGAACACGTGTTTTAGTCCAGGTTCCCTCTCTTCTGTGGTCAGTTaGTTTGCAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTG +
Preference number: 5 (lower is better)
Translates to: RNTCFSPGSLSSVVS*FATGVSRSPCFSGL
Trigger: CAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGGAACCTGGACTAAAACACGTGTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS TCA 90 bp AGGCCTGCCCCTTTGTTTCCTCTGAGGAAACGAAGGCTTCAGGAGTaGATGTCAAACATGATGCCCTTTGTCTTGGTGAGTGCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: RPAPLFPLRKRRLQE*MSNMMPFVLVSAVL
Trigger: CAGAACTGCACTCACCAAGACAAAGGGCATCATGTTTGACATTCACTCCTGAAGCCTTCGTTTCCTCAGAGGAAACAAAGGGGCAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 90 bp AATCGAGAGTGTGGAAACGAACCTCTCTTCTGTGGTCAGTTGATTTaGAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: NRECGNEPLFCGQLI*NRSLKITLLLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGTTCGTTTCCACACTCTCGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331826.12
ENST00000559417.2
CDS-3UTR CAA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGCCAATCTGGCCCAAGTaGAGGTACCCGTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: LQIHMELHGTQNSQNNLEPIWPK*RYPCAA
Trigger: GGCGGCGCACGGGTACCTCAACTTGGGCCAGATTGG...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAATCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKSFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCATCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPSFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGCGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPERQRLF*SPQCRY
Trigger: GTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCG...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATCGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYRQRLF*SPQCRY
Trigger: GTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCG...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAACCTCCTATTTTGGCATaGTACGCTATGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKPPILA*YAMPTM
Trigger: CATCGTGGGCATAGCGTACAATGCCAAAATAGGAGG...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCGGATGCCTCCTATTTaGGCATTGTACGCTATGCCC +
Preference number: 5 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGRMPPI*ALYAMP
Trigger: GGGCATAGCGTACAATGCCAAAATAGGAGGCATCCG...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp AAATCCAAAGAAATGGTAAGTGGATTAGAGGTTGCCAGGAGCTGGGAGGGGAGGAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: KSKEMVSGLEVARSWEGRRLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...CCTCCCCTCCCAGCTCCTGGCAACCTCTAATCCACTTACCATTTCTTTGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CAA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACACTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTLLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp AAGAAAGAACAAGTTATACATGCAGCACAGTTAGGACTCTGTGAAATGTCAGGGATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: KKEQVIHAAQLGLCEMSGMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...CCCTGACATTTCACAGAGTCCTAACTGTGCTGCATGTATAACTTGTTCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp GCCCAAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAGATCCAGCAACCTCTTaGCCAGAAGTTGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: AQAYLIPKTEGKSGKGVSDPATS*PEVETW
Trigger: CCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATC...TGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAAGATCCAGCAACCTCTTaGCCAGAAGTTGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKDPATS*PEVETW
Trigger: CCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATC...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp CTATTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCTTCTTTCAACTTCCCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: LLTFWSGQFFVMGAAVHCFFQLP*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAA...GCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CAA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATTTGCTGCACGTGTGGTaGGTGATGCAGGAGGTCCCC +
Preference number: 5 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANLLHVW*VMQEVP
Trigger: GGGGACCTCCTGCATCACCAACCACACGTGCAGCAA...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AGGCTAACGTGGTCTGAAGGGGTCTCTTTGCCCAGTGACATTCTGGGGTTGGGAGCCAACAAGCAGCATTaGAGAGGATATCACCATTTT +
Preference number: 5 (lower is better)
Translates to: RLTWSEGVSLPSDILGLGANKQH*RGYHHF
Trigger: AAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGC...TCCCAACCCCAGAATGTCACTGGGCAAAGAGACCCCTTCAGACCACGTTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp TTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGAAATGTCTCCAGACGTaGCCAAATGTCCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: LTFWSGQFFVMGAAVHCRKCLQT*PNVPGL
Trigger: CAGACCAGGGACATTTGGCAACGTCTGGAGACATTT...CCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS-3UTR CAA 90 bp GCTCCCTGCAGCCATATTCTGCTGCACAAGCCTGTCCTTGTAGCCACAGCTGATCTGGGATTTCCTCCATaGCTTCCTTACATCAACATT +
Preference number: 5 (lower is better)
Translates to: APCSHILLHKPVLVATADLGFPP*LPYINI
Trigger: AATGTTGATGTAAGGAAGCAATGGAGGAAATCCCAG...ATCAGCTGTGGCTACAAGGACAGGCTTGTGCAGCAGAATATGGCTGCAGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS GCA 90 bp AGCCAACCCACGTCTGAACTTCAGCAAGCCCCTCAGGCTAAGGACTaGATTCCTTGGCAAGGGTTTATTTCACCACCTCTTTGTAAACAA +
Preference number: 5 (lower is better)
Translates to: SQPTSELQQAPQAKD*IPWQGFISPPLCKQ
Trigger: TTGTTTACAAAGAGGTGGTGAAATAAACCCTTGCCAAGGAATGCAGTCCTTAGCCTGAGGGGCTTGCTGAAGTTCAGACGTGGGTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678381.1
CDS CCA 90 bp CGCACAACGAGTGCCGTGTTTATTTTCATTGCTGGCATCATATCGTaGAGATGGGTCATAATCATTGCCGTTCACGTCGTAGCTGGCGTA +
Preference number: 5 (lower is better)
Translates to: RTTSAVFIFIAGIIS*RWVIIIAVHVVAGV
Trigger: TACGCCAGCTACGACGTGAACGGCAATGATTATGACCCATCTCCACGATATGATGCCAGCAATGAAAATAAACACGGCACTCGTTGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS CCA 90 bp TCTGCCACCGGAACACGTGTTTTAGTCCAGGTTCCCTCTCTTCTGTaGTCAGTTGATTTGCAACAGGAGTCTCAAGATCACCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SATGTRVLVQVPSLL*SVDLQQESQDHLAS
Trigger: AGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGGAACCTGGACTAAAACACGTGTTCCGGTGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS CCA 90 bp ACGTCTGAACTTCAGCAAGCCCCTCAGGCTAAGGACTGCATTCCTTaGCAAGGGTTTATTTCACCACCTCTTTGTAAACAAGTTTCCGGC +
Preference number: 5 (lower is better)
Translates to: TSELQQAPQAKDCIP*QGFISPPLCKQVSG
Trigger: GCCGGAAACTTGTTTACAAAGAGGTGGTGAAATAAACCCTTGCCAAGGAATGCAGTCCTTAGCCTGAGGGGCTTGCTGAAGTTCAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678381.1
CDS-3UTR CAA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTTCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGSFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp TTGCAAAATGACAGTGACACAAAAACGCCCACCATTTCGGAAGAATCTGCTGGGTGCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: LQNDSDTKTPTISEESAGCRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGCA...CCCAGCAGATTCTTCCGAAATGGTGGGCGTTTTTGTGTCACTGTCATTTTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CAA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAACGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: WSSVPLQYFTEITKALVQRQRLF*SPQCRY
Trigger: GTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCG...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CAA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGCCTCCTATTTTGGCATaGTACGCTATGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: VYGDCLESVPSSSALFPRPPILA*YAMPTM
Trigger: CATCGTGGGCATAGCGTACAATGCCAAAATAGGAGG...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp ATCCAGCTCTGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: IQLWTSKGSQSSKCGGFGRLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...ACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCAGAGCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNRLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: DTKGQVLYYFIYMKCPGEMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...CTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CAA 90 bp GATGAAAACATTCTGGAATTAGATAGTGCTGACGTTTACATGACATCGTGGATGCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: DENILELDSADVYMTSWMPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...CATCCACGATGTCATGTAAACGTCAGCACTATCTAATTCCAGAATGTTTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CAA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGAGTCTCAAGATCACCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPESLKIT*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACT...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp TGCTTTGGTCTTGAAGATTCAGTAAACTTATGGTCCCAGAAGCTGCTCCAAAGCAAGCACTGGTCTGCATaGGGGCCATCACAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: CFGLEDSVNLWSQKLLQSKHWSA*GPSQPL
Trigger: CAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTT...GCTTTGGAGCAGCTTCTGGGACCATAAGTTTACTGAATCTTCAAGACCAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGACCGGCGACAGCGTCTaGCTGCTGTGTCCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGTGDSV*LLCPQS
Trigger: ACTTTGGGGACACAGCAGCAAGACGCTGTCGCCGGT...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCAGGGTGGTCTGCTTAGGTGTTTaGCCCATTTTTCTATTGGGC +
Preference number: 5 (lower is better)
Translates to: TFWSGQFFVMGAAVHCRVVCLGV*PIFLLG
Trigger: GCCCAATAGAAAAATGGGCAAAACACCTAAGCAGAC...CACCCTGCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp CTATTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCCGTAAGAACAGGACATaGCCACATTCCAGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: LLTFWSGQFFVMGAAVHCRKNRT*PHSRSP
Trigger: AGGGCTTCTGGAATGTGGCAATGTCCTGTTCTTACG...GCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp GGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATTTAGTCCAGGTTCCCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: GHLSLCSISQRLPKLLFNLVQVP*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGGAACCTGGACTAA...ATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CAA 90 bp TTTTACCTGGAAGATGCTGGAGGTCTTGTCATTTGTCCCATCAACTGGAGAAGGTACAGTGGTGCAATCTaGGCTCACTGCAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: FYLEDAGGLVICPINWRRYSGAI*AHCSFT
Trigger: GGTGAAGCTGCAGTGAGCCAAGATTGCACCACTGTA...CCTTCTCCAGTTGATGGGACAAATGACAAGACCTCCAGCATCTTCCAGGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS-3UTR CAA 90 bp CACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCATTCTCTGCCTGGCCCTaGTTTTGCCCTTGCATTTTA +
Preference number: 5 (lower is better)
Translates to: HRHRSFHLKNESSEGQRPFSAWP*FCPCIL
Trigger: TAAAATGCAAGGGCAAAACAAGGGCCAGGCAGAGAA...TGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS TCA 90 bp AACAGAATCGAGAGTGTGGAAACGAACCTCTCTTCTGTGGTCAGTTaGTTTGCAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTG +
Preference number: 5 (lower is better)
Translates to: NRIESVETNLSSVVS*FATGVSRSPCFSGL
Trigger: CAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGTTCGTTTCCACACTCTCGATTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331826.12
ENST00000559417.2
CDS TCA 90 bp GCTGGCACACACTTCCAGTCGTGGAAGTGGAAGTTTTTCGCACAGTaGATGCACTCTTCTCTGCCTGGCCCAATGAATTTAATAGCTGAA +
Preference number: 5 (lower is better)
Translates to: AGTHFQSWKWKFFAQ*MHSSLPGPMNLIAE
Trigger: TTCAGCTATTAAATTCATTGGGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAAACTTCCACTTCCACGACTGGAAGTGTGTGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558433.5
CDS TCA 90 bp GTGGCCAAAGTTATAGAGTATAGGAGACCCCAGACTCTTGTGACCTaGGGGTTCTTCCGTAATGTCACTGTGAGCTTCCGGGATACTTTT +
Preference number: 5 (lower is better)
Translates to: VAKVIEYRRPQTLVT*GFFRNVTVSFRDTF
Trigger: AAAAGTATCCCGGAAGCTCACAGTGACATTACGGAAGAACCCTCAGGTCACAAGAGTCTGGGGTCTCCTATACTCTATAACTTTGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677996.1
ENST00000678381.1
CDS CCA 90 bp ACGAGTGCCGTGTTTATTTTCATTGCTGGCATCATATCGTGGAGATaGGTCATAATCATTGCCGTTCACGTCGTAGCTGGCGTAGGAATC +
Preference number: 5 (lower is better)
Translates to: TSAVFIFIAGIISWR*VIIIAVHVVAGVGI
Trigger: GATTCCTACGCCAGCTACGACGTGAACGGCAATGATTATGACCCATCTCCACGATATGATGCCAGCAATGAAAATAAACACGGCACTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS CCA 90 bp CGAGGTGACGTACTTATTTTCATTGCTGGCATCATATCGTGGAGATaGGTCATAATCATTGCCGTTCACGTCGTAGCTGGCGTAGGAATC +
Preference number: 5 (lower is better)
Translates to: RGDVLIFIAGIISWR*VIIIAVHVVAGVGI
Trigger: GATTCCTACGCCAGCTACGACGTGAACGGCAATGATTATGACCCATCTCCACGATATGATGCCAGCAATGAAAATAAGTACGTCACCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS CCA 90 bp ATGAGGCGAGGTGACGTACTTATTTTCATTGCTGGCATCATATCGTaGAGATGGGTCATAATCATTGCCGTTCACGTCGTAGCTGGCGTA +
Preference number: 5 (lower is better)
Translates to: MRRGDVLIFIAGIIS*RWVIIIAVHVVAGV
Trigger: TACGCCAGCTACGACGTGAACGGCAATGATTATGACCCATCTCCACGATATGATGCCAGCAATGAAAATAAGTACGTCACCTCGCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS CCA 90 bp AGCTCAAGAGTAAAGACTAGTGAGTTGCTGGCCACCTTCATTTGGTaGGGACTTGAGGAAAAGACAAAAGTCCTCATTCTCTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SSRVKTSELLATFIW*GLEEKTKVLILCCP
Trigger: TGGGCAGCAGAGAATGAGGACTTTTGTCTTTTCCTCAAGTCCCCACCAAATGAAGGTGGCCAGCAACTCACTAGTCTTTACTCTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp GGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: GLPKAAKVLNVVALVICPCSRNC*LKQQLL
Trigger: GAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCA...GGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp CATGGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGTGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: HGFSDYRQCKGCMLSATWCSRNC*LKQQLL
Trigger: GAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCA...CCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp CATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCACCACCCACCCTCCTATTTTGGCATaGTACGCTATGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: HLRGYHHFRNTSLRATTHPPILA*YAMPTM
Trigger: CATCGTGGGCATAGCGTACAATGCCAAAATAGGAGG...GTGGGTGGTGGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATCGGATGCCTCCTATTTaGGCATTGTACGCTATGCCC +
Preference number: 5 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYRMPPI*ALYAMP
Trigger: GGGCATAGCGTACAATGCCAAAATAGGAGGCATCCG...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGATGCTCCTGGGTCTCTaGTCCGAGGCGGCCACACAC +
Preference number: 5 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILMLLGL*SEAATH
Trigger: GTGTGTGGCCGCCTCGGACAAGAGACCCAGGAGCAT...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp GGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GHLSLCSISQRLPKLLFNPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...ATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CAA 90 bp GGTTTCTCTGATTATCGACAGTGCAAAGGATGCATGCTGAGCGCGACATGGGCATTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: GFSDYRQCKGCMLSATWAFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...TGCCCATGTCGCGCTCAGCATGCATCCTTTGCACTGTCGATAATCAGAGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS-3UTR CAA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKLGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGCTCTTCTGTGGTCAGTaGATTTGCAACAGGAGTCTC +
Preference number: 5 (lower is better)
Translates to: VYGDCLESVPSSSALFPRLFCGQ*ICNRSL
Trigger: GAGACTCCTGTTGCAAATCAACTGACCACAGAAGAG...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp GACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGCAAGAGCCACTGACCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: DTKGQVLYYFIYMKCPGEQEPLT*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGTCAGTGGCTCTTG...CTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CAA 90 bp GCCCAAGCGTACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCACAAGCACAGGATAGATaGAGCCATCGAACACAGATT +
Preference number: 5 (lower is better)
Translates to: AQAYLIPKTEGKSGKGVSQAQDR*SHRTQI
Trigger: AATCTGTGTTCGATGGCTCAATCTATCCTGTGCTTG...TGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTACGCTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp CTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCTCTGTGTATGGTGACTGTTaGGAGAGTGTGCCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LPKAAKVLNVVALVICPSVYGDC*ESVPSS
Trigger: AGAACTTGGCACACTCTCCAAACAGTCACCATACAC...AGAGGGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp AATACTGTGATTCATAAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGCAAACGAGGAGAGTTTaGGGGAAAGGCGTCACTGTC +
Preference number: 5 (lower is better)
Translates to: NTVIHKCAQQQLVAFLPEQTRRV*GKGVTV
Trigger: GACAGTGACGCCTTTCCCCAAAACTCTCCTCGTTTG...CTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTTATGAATCACAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp TGTTCGAAAATCAAACACACTTATCTATTCTGGGGCGAACCTGGCTGCCAGAATTCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: CSKIKHTYLFWGEPGCQNSFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...ATTCTGGCAGCCAGGTTCGCCCCAGAATAGATAAGTGTGTTTGATTTTCGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp TTAGTGACAAACTTGAAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCTGCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: LVTNLKAGTEGMCFKSVFCRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGCA...GAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATGCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: WSSVPLQYFTEITKALVQCRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGCA...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CAA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACCGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYRQRLF*SPQCRY
Trigger: GTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCG...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACATGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTCSRNC*LKQQLL
Trigger: GAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCA...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTCGGATGCCTCCTATTTaGGCATTGTACGCTATGCCC +
Preference number: 5 (lower is better)
Translates to: IAKTILRKNHQVGGLALSRMPPI*ALYAMP
Trigger: GGGCATAGCGTACAATGCCAAAATAGGAGGCATCCG...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKRLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp GGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GHLSLCSISQRLPKLLFNLLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...ATTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CAA 90 bp CACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAAATGTCCAGGAGAGGCCCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: HKRPGVVLFHLYEMSRRGPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...GCCTCTCCTGGACATTTCATATAGATGAAATAATACAACACCTGGCCTTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CAA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPPCFSG*RTWDGR
Trigger: TCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp AAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCACTGTCGGCCAACAAGCAGCATTaGAGAGGATATCACCATTTT +
Preference number: 5 (lower is better)
Translates to: KQHLGSLQLTGDKANALSANKQH*RGYHHF
Trigger: AAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGC...CGACAGTGCATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS CCA 90 bp ACCAATGGAACAGAATCGAGAGTGTGGAAACGAACCTCTCTTCTGTaGTCAGTTGATTTGCAACAGGAGTCTCAAGATCACCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: TNGTESRVWKRTSLL*SVDLQQESQDHLAS
Trigger: AGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGTTCGTTTCCACACTCTCGATTCTGTTCCATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331826.12
ENST00000559417.2
CDS-3UTR CAA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: IAKTILRKNHQVGGLALSSFHFL*LEPFHL
Trigger: CAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGA...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACCCGTGTTTATTTTCATaGCTGGCATCATATCGTGGA +
Preference number: 5 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNPCLFS*LASYRG
Trigger: TCCACGATATGATGCCAGCAATGAAAATAAACACGG...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp TGGACTTCCAAAGGCAGCCAAAGTTCTAAATGTGGTGGCTTTGGTCATCTGTCCCCGTGTTTATTTTCATaGCTGGCATCATATCGTGGA +
Preference number: 5 (lower is better)
Translates to: WTSKGSQSSKCGGFGHLSPCLFS*LASYRG
Trigger: TCCACGATATGATGCCAGCAATGAAAATAAACACGG...GGACAGATGACCAAAGCCACCACATTTAGAACTTTGGCTGCCTTTGGAAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACACCGTGTTTATTTTCATaGCTGGCATCATATCGTGGA +
Preference number: 5 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTPCLFS*LASYRG
Trigger: TCCACGATATGATGCCAGCAATGAAAATAAACACGG...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp ATAGCCAAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTCCTCCTATTTTGGCATaGTACGCTATGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: IAKTILRKNHQVGGLALSPPILA*YAMPTM
Trigger: CATCGTGGGCATAGCGTACAATGCCAAAATAGGAGG...AGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp TGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGCTCTTGTTCAAGATCCAGCAACCTCTTaGCCAGAAGTTGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: WSSVPLQYFTEITKALVQDPATS*PEVETW
Trigger: CCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATC...TTGAACAAGAGCTTTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CAA 90 bp TATCTTATTTATAGTCTGACCAAACCGTCCCCAGACTGCTCAGTGGCAGGCAACTTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: YLIYSLTKPSPDCSVAGNFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...GTTGCCTGCCACTGAGCAGTCTGGGGACGGTTTGGTCAGACTATAAATAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp GTGTATGGTGACTGTTTGGAGAGTGTGCCAAGTTCTTCAGCTCTGTTTCCAAGGTTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: VYGDCLESVPSSSALFPRFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...CCTTGGAAACAGAGCTGAAGAACTTGGCACACTCTCCAAACAGTCACCATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp TACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGCTCCTGTGGTCAGTTGATTaGCAACAGGAGTCTCAAGAT +
Preference number: 5 (lower is better)
Translates to: YLIPKTEGKSGKGVSRELLWSVD*QQESQD
Trigger: ATCTTGAGACTCCTGTTGCAAATCAACTGACCACAG...GAGCTCTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp AAATGCCTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTATTCTTTCAACTTCCCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: KCLHRFGRINPTVSCRLVFFQLP*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAA...TACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGCACTGTCGTCAAACAGGGGAGCAGGACAATATGGAGAAAGACGAGGTCGAAATTCCCAGAATTCATTTaGTTCCTGTTAGTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: CTVVKQGSRTIWRKTRSKFPEFI*FLLVCR
Trigger: CCGACAAACTAACAGGAACAAAATGAATTCTGGGAA...TTTCGACCTCGTCTTTCTCCATATTGTCCTGCTCCCCTGTTTGACGACAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGTCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTTTGCTAAGAACTTTATaGGGACAACTGGCAGAACTA +
Preference number: 5 (lower is better)
Translates to: CLHLVTTLAPRVTIILPSLLRTL*GQLAEL
Trigger: TAGTTCTGCCAGTTGTCCCAATAAAGTTCTTAGCAA...AGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp TACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGCTCAGATTACCAAAGCTCTaGTTCAATCTGCCACCGGAA +
Preference number: 5 (lower is better)
Translates to: YLIPKTEGKSGKGVSRELRLPKL*FNLPPE
Trigger: TTCCGGTGGCAGATTGAACAAGAGCTTTGGTAATCT...GAGCTCTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp AAAGCCGGCACAGAAGGCATGTGCTTTAAATCTGTCTTCCTTTCTAGCATCAAGAAACAAGGTTCATGCTaGCACGCACACGCATTCATG +
Preference number: 5 (lower is better)
Translates to: KAGTEGMCFKSVFLSSIKKQGSC*HAHAFM
Trigger: CATGAATGCGTGTGCGTGCAAGCATGAACCTTGTTT...CTTGATGCTAGAAAGGAAGACAGATTTAAAGCACATGCCTTCTGTGCCGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGTTTAGTGACAAACTaGAAAGCCGGCACAGAAGGC +
Preference number: 5 (lower is better)
Translates to: NVVALVICPSAVFHRDYQSLVTN*KAGTEG
Trigger: GCCTTCTGTGCCGGCTTTCAAGTTTGTCACTAAACT...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS-3UTR CAA 90 bp GCACAGGATAGATTGAGCCATCGAACACAGATTGCAAAATCTCAACTCTTATCTCAAACGAGGAGAGTTTaGGGGAAAGGCGTCACTGTC +
Preference number: 5 (lower is better)
Translates to: AQDRLSHRTQIAKSQLLSQTRRV*GKGVTV
Trigger: GACAGTGACGCCTTTCCCCAAAACTCTCCTCGTTTG...AGATAAGAGTTGAGATTTTGCAATCTGTGTTCGATGGCTCAATCTATCCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS CCA 90 bp CTCCAGAGGGTTTACTATAATATTTTGGATCAATTCCCATCTGATTaGATTCTTTGCCCACCTCATCCTGGGTCATCTATGAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: LQRVYYNILDQFPSD*ILCPPHPGSSMRTA
Trigger: GGCTGTCCTCATAGATGACCCAGGATGAGGTGGGCAAAGAATCCAATCAGATGGGAATTGATCCAAAATATTATAGTAAACCCTCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS-3UTR CAA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACTGCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYCRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGCA...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGRLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNLGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp ATAAATCCAACTGTGTCATGTAGGCTTGTAATATACACAGACACAGGAGTTTCCTTCTTTCAACTTCCCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: INPTVSCRLVIYTDTGVSFFQLP*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAA...GGAAACTCCTGTGTCTGTGTATATTACAAGCCTACATGACACAGTTGGATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATGGCTGGCTTTACATTTaGTTCAGAGGAATTGCTTGG +
Preference number: 5 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYGWLYI*FRGIAW
Trigger: CCAAGCAATTCCTCTGAACAAAATGTAAAGCCAGCC...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCTTGCCGGAGAATGTCGTaGTTCATAGGAAATACCCAC +
Preference number: 5 (lower is better)
Translates to: SISFGRNFSTSALLTFWSCRRMS*FIGNTH
Trigger: GTGGGTATTTCCTATGAACAACGACATTCTCCGGCA...AGACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp TCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTTGTTTAGTCAGCTATCCTaGCAGAATACAAGCTTTAGA +
Preference number: 5 (lower is better)
Translates to: SSSSHHPCPKGNHYPAILFSQLS*QNTSFR
Trigger: TCTAAAGCTTGTATTCTGCAAGGATAGCTGACTAAA...CAAGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp TCTTCATCTAGTCACCACCCTTGCCCCAAGGGTAACCATTATCCTGCCATCTTGCGCTGTGAGAAACTTTaGCCTACTCCAAAATTATAT +
Preference number: 5 (lower is better)
Translates to: SSSSHHPCPKGNHYPAILRCEKL*PTPKLY
Trigger: ATATAATTTTGGAGTAGGCAAAAGTTTCTCACAGCG...CAAGATGGCAGGATAATGGTTACCCTTGGGGCAAGGGTGGTGACTAGATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp AATGTGGTGGCTTTGGTCATCTGTCCCTCTGCAGTATTTCACAGAGATTACCAAAGATTACCAAAGCTCTaGTTCAATCTGCCACCGGAA +
Preference number: 5 (lower is better)
Translates to: NVVALVICPSAVFHRDYQRLPKL*FNLPPE
Trigger: TTCCGGTGGCAGATTGAACAAGAGCTTTGGTAATCT...TTGGTAATCTCTGTGAAATACTGCAGAGGGACAGATGACCAAAGCCACCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS CCA 90 bp ATTGCTCCTGGCTTAAAGAGAACTATGAGTAAATATTGGTATAGGTaGTGTCTCGGTGTGGCCAAAGTTATAGAGTATAGGAGACCCCAG +
Preference number: 5 (lower is better)
Translates to: IAPGLKRTMSKYWYR*CLGVAKVIEYRRPQ
Trigger: CTGGGGTCTCCTATACTCTATAACTTTGGCCACACCGAGACACCACCTATACCAATATTTACTCATAGTTCTCTTTAAGCCAGGAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677996.1
ENST00000678381.1
CDS CCA 90 bp GCACACGTCATTGCTCCTGGCTTAAAGAGAACTATGAGTAAATATTaGTATAGGTGGTGTCTCGGTGTGGCCAAAGTTATAGAGTATAGG +
Preference number: 5 (lower is better)
Translates to: AHVIAPGLKRTMSKY*YRWCLGVAKVIEYR
Trigger: CCTATACTCTATAACTTTGGCCACACCGAGACACCACCTATACCAATATTTACTCATAGTTCTCTTTAAGCCAGGAGCAATGACGTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677996.1
ENST00000678381.1
CDS-3UTR CAA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATTGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANCSRNC*LKQQLL
Trigger: GAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCA...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAGGTTAACTGGCTGTTaGCTTCTAGAGCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: KTILRKNHQVGGLALSYFRLTGC*LLEPRR
Trigger: TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCT...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPPLCQK*RLGSRG
Trigger: CCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp AATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCAAAACGATCCAGCAACCTCTTaGCCAGAAGTTGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: NLEKEPPSWRTRTFLFQNDPATS*PEVETW
Trigger: CCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATC...GTTTTGAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp GTGAAAGAAGCCAGACACAAAAGGCCAGGTGTTGTATTATTTCATCTATATGAACTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: VKEARHKRPGVVLFHLYELGWQI*DFQGPL
Trigger: CAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAG...TTCATATAGATGAAATAATACAACACCTGGCCTTTTGTGTCTGGCTTCTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CAA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCAAGTCTCAAGATCACCTaGCTTCTCCGGGTTGCGGAC +
Preference number: 5 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPSLKIT*LLRVAD
Trigger: GTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACT...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAATGTCTCGTCAGCGTaGCTGCACGTGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSNVSSA*LHVWLV
Trigger: CACCAACCACACGTGCAGCAACGCTGACGAGACATT...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATGCCAACAAGCAGCATTaGAGAGGATATCACCATTTT +
Preference number: 5 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYANKQH*RGYHHF
Trigger: AAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGC...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AACAAGCAGCATTTGAGAGGATATCACCATTTTAGGAACACCTCCTTAAGAGCCTTTGTTCCTGTTAGTTaGTCGGAAGACTGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: NKQHLRGYHHFRNTSLRAFVPVS*SEDWSQ
Trigger: TTGGCTCCAGTCTTCCGACAAACTAACAGGAACAAA...GGCTCTTAAGGAGGTGTTCCTAAAATGGTGATATCCTCTCAAATGCTGCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGCCCTATTCAAGGGAATaGATCAAGCAGATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: SCRFNKQHLGSLQLTGDKPYSRE*IKQICA
Trigger: TGCACAGATCTGCTTGATCAATTCCCTTGAATAGGG...CTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCTACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TTTGATTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTAGAGCTGGTTTTAACTaGGGGCCCTTCTGTTGCTGT +
Preference number: 5 (lower is better)
Translates to: FDSISFGRNFSTSALLTFRAGFN*GPFCCC
Trigger: ACAGCAACAGAAGGGCCCCAAGTTAAAACCAGCTCT...AAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp CTATTGACATTTTGGTCTGGACAGTTCTTTGTCATGGGGGCTGCTGTGCATTGCCAACTTACTCTCAAATaGGGAGGGAATTTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: LLTFWSGQFFVMGAAVHCQLTLK*GGNFFV
Trigger: TACAAAGAAATTCCCTCCCAATTTGAGAGTAAGTTG...GCAATGCACAGCAGCCCCCATGACAAAGAACTGTCCAGACCAAAATGTCAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp ATCTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGTCCAGGTACCACATGTaGGACCAAATGGGGTCGTTG +
Preference number: 5 (lower is better)
Translates to: IFKFTWNYTGPKIAKTILSRYHM*DQMGSL
Trigger: CAACGACCCCATTTGGTCCAACATGTGGTACCTGGA...CAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp AAATGTGCACAGCAGCAGTTGGTTGCATTTCTCCCCGAGATAAGTGGGGATACAACAAAGGTCATCTTTTaGTTATGCTTTCTACTGGAG +
Preference number: 5 (lower is better)
Translates to: KCAQQQLVAFLPEISGDTTKVIF*LCFLLE
Trigger: CTCCAGTAGAAAGCATAACAAAAAGATGACCTTTGT...TGTATCCCCACTTATCTCGGGGAGAAATGCAACCAACTGCTGCTGTGCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611967.4
ENST00000615296.4
CDS-3UTR CAA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACTGCTGTCCACTTCTTaGCCTCCACAACGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPLLSTS*PPQREL
Trigger: AAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGCTCTTCTGTGGTCAGTaGATTTGCAACAGGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LQIHMELHGTQNSQNNLELFCGQ*ICNRSL
Trigger: GAGACTCCTGTTGCAAATCAACTGACCACAGAAGAG...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp AGATTCAATAAACAACATCTGGGTTCTCTCCAGCTCACAGGTGACAAGGCAAATGCCAACAAGCAGCATTaGAGAGGATATCACCATTTT +
Preference number: 5 (lower is better)
Translates to: RFNKQHLGSLQLTGDKANANKQH*RGYHHF
Trigger: AAAATGGTGATATCCTCTCAAATGCTGCTTGTTGGC...ATTTGCCTTGTCACCTGTGAGCTGGAGAGAACCCAGATGTTGTTTATTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGCAGAGGCCAAATGTATTTCCCAGAATTCATTTaGTTCCTGTTAGTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: TGVSTLKTSLLKGRGQMYFPEFI*FLLVCR
Trigger: CCGACAAACTAACAGGAACAAAATGAATTCTGGGAA...ATACATTTGGCCTCTGCCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGGGCTGGCTTTACATTTaGTTCAGAGGAATTGCTTGG +
Preference number: 5 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGGWLYI*FRGIAW
Trigger: CCAAGCAATTCCTCTGAACAAAATGTAAAGCCAGCC...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp ATAGGAACAGGGACAGAAGTCAAACCATATGTGGTTTTATTCATTGAGGGTATCCTGGTTCTGTATTTTTaGCCCTGTTACACTGGCTGG +
Preference number: 5 (lower is better)
Translates to: IGTGTEVKPYVVLFIEGILVLYF*PCYTGW
Trigger: CCAGCCAGTGTAACAGGGCAAAAAATACAGAACCAG...GATACCCTCAATGAATAAAACCACATATGGTTTGACTTCTGTCCCTGTTCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp TTCCATTTCTTTTGGCCGGAATTTCTCAACCTCGGCACTATTGACATTTTGGTCAGCATCCTGCAGATTTaGTGTCAAGGCCTTGTATAT +
Preference number: 5 (lower is better)
Translates to: FHFFWPEFLNLGTIDILVSILQI*CQGLVY
Trigger: ATATACAAGGCCTTGACACAAAATCTGCAGGATGCT...GACCAAAATGTCAATAGTGCCGAGGTTGAGAAATTCCGGCCAAAAGAAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS-3UTR CAA 90 bp TACCTCATTCCTAAAACTGAGGGCAAATCTGGGAAAGGGGTTTCAAGAGAGCTCACAAAGGTCATCTTTTaGTTATGCTTTCTACTGGAG +
Preference number: 5 (lower is better)
Translates to: YLIPKTEGKSGKGVSRELTKVIF*LCFLLE
Trigger: CTCCAGTAGAAAGCATAACAAAAAGATGACCTTTGT...GAGCTCTCTTGAAACCCCTTTCCCAGATTTGCCCTCAGTTTTAGGAATGAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS-3UTR CAA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACGCCCCTCACCCACTCTaGTTTTCACCTAAGTCATTT +
Preference number: 5 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYAPHPL*FSPKSF
Trigger: AAATGACTTAGGTGAAAACAAGAGTGGGTGAGGGGC...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS GCA 90 bp GTTTACTATAATATTTTGGATCAATTCCCATCTGATTGGATTCTTTaGCCACCTCATCCTGGGTCATCTATGAGGACAGCCTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: VYYNILDQFPSDWIL*PPHPGSSMRTASKI
Trigger: GATTTTGGAGGCTGTCCTCATAGATGACCCAGGATGAGGTGGGCAAAGAATCCAATCAGATGGGAATTGATCCAAAATATTATAGTAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 90 bp TGTGTGCTCAAACAGACCAAACTGCTGTCTTCACACAGCAGGTCATaGAGACGGTTAGACTTAAGGGTTTCTCTTTTAAAATATTTCAAG +
Preference number: 5 (lower is better)
Translates to: CVLKQTKLLSSHSRS*RRLDLRVSLLKYFK
Trigger: CTTGAAATATTTTAAAAGAGAAACCCTTAAGTCTAACCGTCTCCATGACCTGCTGTGTGAAGACAGCAGTTTGGTCTGTTTGAGCACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS-3UTR CAA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGTGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: LQIHMELHGTQNSQNNLECSRNC*LKQQLL
Trigger: GAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCA...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp CTACACAGGTTTGGCAGAATAAATCCAACTGTGTCATGTAGGCTTGTAATATACTGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: LHRFGRINPTVSCRLVIYCSRNC*LKQQLL
Trigger: GAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCA...GTATATTACAAGCCTACATGACACAGTTGGATTTATTCTGCCAAACCTGTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677528.1
CDS-3UTR CAA 90 bp ATTGATTTCTCTTTCAGAGTTGTAGATTCAATAAACAACATCTGGGTTCTCTCCGATCCAGCAACCTCTTaGCCAGAAGTTGAGACTTGG +
Preference number: 5 (lower is better)
Translates to: IDFSFRVVDSINNIWVLSDPATS*PEVETW
Trigger: CCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATC...GGAGAGAACCCAGATGTTGTTTATTGAATCTACAACTCTGAAAGAGAAATCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp TGTAATATACACAGACACAGGAGTTTCCACCTTAAAAACGAGTCTTCTGAAGGGTTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: CNIHRHRSFHLKNESSEGFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...CCCTTCAGAAGACTCGTTTTTAAGGTGGAAACTCCTGTGTCTGTGTATATTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000677364.1
ENST00000677528.1
CDS-3UTR CAA 90 bp AAAACAATCTTGAGAAAGAACCACCAAGTTGGAGGACTCGCACTTTCTTATTTCCTGTGGTCAGTTGATTaGCAACAGGAGTCTCAAGAT +
Preference number: 5 (lower is better)
Translates to: KTILRKNHQVGGLALSYFLWSVD*QQESQD
Trigger: ATCTTGAGACTCCTGTTGCAAATCAACTGACCACAG...GAAATAAGAAAGTGCGAGTCCTCCAACTTGGTGGTTCTTTCTCAAGATTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp GATGAAAACATTCTGGAATTAGATAGTGCTGACGTTTACATGACATCGTGGATGTTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: DENILELDSADVYMTSWMFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...CATCCACGATGTCATGTAAACGTCAGCACTATCTAATTCCAGAATGTTTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS-3UTR CAA 90 bp CTTCAAATTCACATGGAATTACACGGGACCCAAAATAGCCAAAACAATCTTGAGTTTGTAAACCCTTCATaGGAAAGATCCAGCAACCTC +
Preference number: 5 (lower is better)
Translates to: LQIHMELHGTQNSQNNLEFVNPS*ERSSNL
Trigger: GAGGTTGCTGGATCTTTCCAATGAAGGGTTTACAAA...CTCAAGATTGTTTTGGCTATTTTGGGTCCCGTGTAATTCCATGTGAATTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS CCA 90 bp ACAGACAGTACATTTCTCAGGTTCATCCACGCACTTTTTACAGCTTaGGTGGCATTTAAGGCAATTTTTCTGACTTTCATCAGCATAAAA +
Preference number: 5 (lower is better)
Translates to: TDSTFLRFIHALFTA*VAFKAIFLTFISIK
Trigger: TTTTATGCTGATGAAAGTCAGAAAAATTGCCTTAAATGCCACCCAAGCTGTAAAAAGTGCGTGGATGAACCTGAGAAATGTACTGTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS-3UTR CAA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCACCGTGTTTATTTTCATaGCTGGCATCATATCGTGGA +
Preference number: 5 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPPCLFS*LASYRG
Trigger: TCCACGATATGATGCCAGCAATGAAAATAAACACGG...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS-3UTR CAA 90 bp TCCCAAGTTTATGGACTGGAAGACTTAATATTGTTAATGTGGAAATATTCCCCAATAGCCAAAACAATCTaGAGAAAGAACCACCAAGTT +
Preference number: 5 (lower is better)
Translates to: SQVYGLEDLILLMWKYSPIAKTI*RKNHQV
Trigger: AACTTGGTGGTTCTTTCTCAAGATTGTTTTGGCTAT...TGGGGAATATTTCCACATTAACAATATTAAGTCTTCCAGTCCATAAACTTGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS CCA 72 bp GCAGGGTTGGGAGACGCTCCCAGGCCCCGCTGGGGCTaGACGGCCAGACGACAAGGCGGGAGCAGCCGTCCC +
Preference number: 6 (lower is better)
Translates to: AGLGDAPRPRWG*TARRQGGSSRP
Trigger: GGGACGGCTGCTCCCGCCTTGTCGTCTGGCCGTCCAGCCCCAGCGGGGCCTGGGAGCGTCTCCCAACCCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp TCCAGGTTTCCAATCTGGCCCAAGTTGAGGTACCCGTaGGCCGCCGCCACGCGGTCCGCCTCGGCCGGGCCG +
Preference number: 6 (lower is better)
Translates to: SRFPIWPKLRYP*AAATRSASAGP
Trigger: CGGCCCGGCCGAGGCGGACCGCGTGGCGGCGGCGCACGGGTACCTCAACTTGGGCCAGATTGGAAACCTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS CCA 72 bp AGCTTGGCAGGGTTGGGAGACGCTCCCAGGCCCCGCTaGGGCTGGACGGCCAGACGACAAGGCGGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SLAGLGDAPRPR*GWTARRQGGSS
Trigger: GCTGCTCCCGCCTTGTCGTCTGGCCGTCCAGCCCCAGCGGGGCCTGGGAGCGTCTCCCAACCCTGCCAAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp TCGAGGACGCCACGAGAGCCACATGGGCACCCGGCTTaGCCTTGCACGGCCGCACCCGTGCCTGAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: SRTPREPHGHPA*PCTAAPVPEPS
Trigger: TGAGGGCTCAGGCACGGGTGCGGCCGTGCAAGGTCAAGCCGGGTGCCCATGTGGCTCTCGTGGCGTCCTCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp ACCCGCGGCGGCAAGACAGGCACTGCGTCGCAGCTCTaGTGGAGCAGGTCTCACACCCCTTGTGGCACCGGC +
Preference number: 6 (lower is better)
Translates to: TRGGKTGTASQL*WSRSHTPCGTG
Trigger: GCCGGTGCCACAAGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCGCCGCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS CCA 72 bp CGCGGCGGCAAGACAGGCACTGCGTCGCAGCTCTGCTaGAGCAGGTCTCACACCCCTTGTGGCACCGGCGAC +
Preference number: 6 (lower is better)
Translates to: RGGKTGTASQLC*SRSHTPCGTGD
Trigger: GTCGCCGGTGCCACAAGGGGTGTGAGACCTGCTCCAGCAGAGCTGCGACGCAGTGCCTGTCTTGCCGCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS CCA 72 bp TGTGGCTGGGAGCTCGAGGACGCCACGAGAGCCACATaGGCACCCGGCTTGACCTTGCACGGCCGCACCCGT +
Preference number: 6 (lower is better)
Translates to: CGWELEDATRAT*APGLTLHGRTR
Trigger: ACGGGTGCGGCCGTGCAAGGTCAAGCCGGGTGCCCATGTGGCTCTCGTGGCGTCCTCGAGCTCCCAGCCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp GCACCCGGCTTGACCTTGCACGGCCGCACCCGTGCCTaGGCCCTCATGGGTGTGCACCAGTGGTTGGTGGGT +
Preference number: 6 (lower is better)
Translates to: APGLTLHGRTRA*ALMGVHQWLVG
Trigger: ACCCACCAACCACTGGTGCACACCCATGAGGGCTCAGGCACGGGTGCGGCCGTGCAAGGTCAAGCCGGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp TACCCTCGGGGAGTGGGAGAGATGCCCCACAATTCCTaGCCCTCTCGGACGGTCCTGGCCCAGCCTGCGCAG +
Preference number: 6 (lower is better)
Translates to: YPRGVGEMPHNS*PSRTVLAQPAQ
Trigger: CTGCGCAGGCTGGGCCAGGACCGTCCGAGAGGGGCAGGAATTGTGGGGCATCTCTCCCACTCCCCGAGGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp CTGTGCCTGGCATGGCCTGTGACTCCTGGAGAAGCCTaGCTCGCGCCCAGGCAGGGAAGATACGCCGGCAGC +
Preference number: 6 (lower is better)
Translates to: LCLAWPVTPGEA*LAPRQGRYAGS
Trigger: GCTGCCGGCGTATCTTCCCTGCCTGGGCGCGAGGCAGGCTTCTCCAGGAGTCACAGGCCATGCCAGGCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS CCA 72 bp CAGTCCCGCGGATCCCTGTGTCAGGATATCGCAGCTTaGCAGGGTTGGGAGACGCTCCCAGGCCCCGCTGGG +
Preference number: 6 (lower is better)
Translates to: QSRGSLCQDIAA*QGWETLPGPAG
Trigger: CCCAGCGGGGCCTGGGAGCGTCTCCCAACCCTGCCAAGCTGCGATATCCTGACACAGGGATCCGCGGGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp GGATCTCCGCATGCTCAGGACCGCCTGGTGGGGCTGTaGCTGGCCAGGTCTAGGGTGGGGCAGGGACACAGC +
Preference number: 6 (lower is better)
Translates to: GSPHAQDRLVGL*LARSRVGQGHS
Trigger: GCTGTGTCCCTGCCCCACCCTAGACCTGGCCAGCAACAGCCCCACCAGGCGGTCCTGAGCATGCGGAGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp GCAGTCCCGCGGATCCCTGTGTCAGGATATCGCAGCTaGGCAGGGTTGGGAGACGCTCCCAGGCCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: AVPRIPVSGYRS*AGLGDAPRPRW
Trigger: CCAGCGGGGCCTGGGAGCGTCTCCCAACCCTGCCAAGCTGCGATATCCTGACACAGGGATCCGCGGGACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp GCGGGAGCAGCCGTCCCTGCGGGTAACAGGCACAGCTaGGCCTCGCTGGGCTCCAGTGTCAGTCTGAGCACT +
Preference number: 6 (lower is better)
Translates to: AGAAVPAGNRHS*ASLGSSVSLST
Trigger: AGTGCTCAGACTGACACTGGAGCCCAGCGAGGCTCAGCTGTGCCTGTTACCCGCAGGGACGGCTGCTCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp GCGCAGGCGCTGGTCAGGGCCGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCCTGGGTCTCTTGTCCGAG +
Preference number: 6 (lower is better)
Translates to: AQALVRAVVRST*TKGMLLGLLSE
Trigger: CTCGGACAAGAGACCCAGGAGCATCCCCTTAGTGCAGGTGCTGCGGACTACGGCCCTGACCAGCGCCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000560902.5
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 72 bp GGCCCTGGGTGGGGAGGCTGGCCTGACCTTGGCAGGTaGACAGGCTCTGCCTTGTCGTTCAGGTGCAACCAC +
Preference number: 6 (lower is better)
Translates to: GPGWGGWPDLGR*TGSALSFRCNH
Trigger: GTGGTTGCACCTGAACGACAAGGCAGAGCCTGTGCACCTGCCAAGGTCAGGCCAGCCTCCCCACCCAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp TGCACGGCCGCACCCGTGCCTGAGCCCTCATGGGTGTaGACCAGTGGTTGGTGGGTGCATCTGTCACCCAGG +
Preference number: 6 (lower is better)
Translates to: CTAAPVPEPSWV*TSGWWVHLSPR
Trigger: CCTGGGTGACAGATGCACCCACCAACCACTGGTGCACACCCATGAGGGCTCAGGCACGGGTGCGGCCGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp ATGGGCACCCGGCTTGACCTTGCACGGCCGCACCCGTaGCTGAGCCCTCATGGGTGTGCACCAGTGGTTGGT +
Preference number: 6 (lower is better)
Translates to: MGTRLDLARPHP*LSPHGCAPVVG
Trigger: ACCAACCACTGGTGCACACCCATGAGGGCTCAGGCACGGGTGCGGCCGTGCAAGGTCAAGCCGGGTGCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp GCGGGCCGAGTGCTTGAAGGAGCACGTTTCCCATCCTaGGGCCGTGAGTGCACCCCGGCTATGCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: AGRVLEGARFPS*GRECTPAMLLP
Trigger: AGGCAGCAGCATAGCCGGGGTGCACTCACGGCCCCAGGATGGGAAACGTGCTCCTTCAAGCACTCGGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 72 bp AGATGCCCCACAATTCCTGCCCCTCTCGGACGGTCCTaGCCCAGCCTGCGCAGAGATGGACACCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: RCPTIPAPLGRS*PSLRRDGHQPG
Trigger: CCCTGGCTGGTGTCCATCTCTGCGCAGGCTGGGCCAGGACCGTCCGAGAGGGGCAGGAATTGTGGGGCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 72 bp GGACTCCTGCCTACTGCCCACCTGTCCCTCCTACGCTaGGAAACGGCCCAGGGGACCCCGACAGCTCTGACA +
Preference number: 6 (lower is better)
Translates to: GLLPTAHLSLLR*ETAQGTPTALT
Trigger: TGTCAGAGCTGTCGGGGTCCCCTGGGCCGTTTCCCAGCGTAGGAGGGACAGGTGGGCAGTAGGCAGGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 90 bp AGAGCCATGTCCCCTGAGCTGGCCTGTGAGGACAGCACCAGGGCCTaGAATCGCATCCGTCTCCAGGCCCTCTGGGGCAGCCTTGGCACG +
Preference number: 6 (lower is better)
Translates to: RAMSPELACEDSTRA*NRIRLQALWGSLGT
Trigger: CGTGCCAAGGCTGCCCCAGAGGGCCTGGAGACGGATGCGATTCAAGGCCCTGGTGCTGTCCTCACAGGCCAGCTCAGGGGACATGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp CAGAGGGAGCACACCTGCCCACTGGCCGTGCCACGATaGTGGGCCCTGTTTCCAACAGGCCTAGGCCCACCT +
Preference number: 6 (lower is better)
Translates to: QREHTCPLAVPR*WALFPTGLGPP
Trigger: AGGTGGGCCTAGGCCTGTTGGAAACAGGGCCCATCATCGTGGCACGGCCAGTGGGCAGGTGTGCTCCCTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560785.1
CDS GCA 72 bp CCCTCTGATGGGGTCTGGTCTCACCACGGACTCCGCTaGTCTGGAGCCCCAGGTGCAGCATCGCTTCAGCCT +
Preference number: 6 (lower is better)
Translates to: PSDGVWSHHGLR*SGAPGAASLQP
Trigger: AGGCTGAAGCGATGCTGCACCTGGGGCTCCAGAGCAGCGGAGTCCGTGGTGAGACCAGACCCCATCAGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp TGGCCATGCCTGCTTACCCTCGGGGAGTGGGAGAGATaGCCCACAATTCCTGCCCCTCTCGGACGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: WPCLLTLGEWER*PTIPAPLGRSW
Trigger: CCAGGACCGTCCGAGAGGGGCAGGAATTGTGGGGCATCTCTCCCACTCCCCGAGGGTAAGCAGGCATGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp CTCCCAGAGCTGTGTCAGTCTTCTCTCTCCAGCGGCTaGCGGGCTGCGATGGCTGTAGGCTTGGGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LPELCQSSLSSG*RAAMAVGLGSR
Trigger: CCTGGACCCCAAGCCTACAGCCATCGCAGCCCGGCAGCCGCTGGAGAGAGAAGACTGACACAGCTCTGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp TGCCCTCCAGGCACTCCTTTGCTGGACACAGCTGCCTaGCGTTCCCCGCCAGGAGGACCGTACCTTCGACAC +
Preference number: 6 (lower is better)
Translates to: CPPGTPLLDTAA*RSPPGGPYLRH
Trigger: GTGTCGAAGGTACGGTCCTCCTGGCGGGGAACGGCAGGCAGCTGTGTCCAGCAAAGGAGTGCCTGGAGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 72 bp ACTCTGCCCTCCAGGCACTCCTTTGCTGGACACAGCTaGCTGCCGTTCCCCGCCAGGAGGACCGTACCTTCG +
Preference number: 6 (lower is better)
Translates to: TLPSRHSFAGHS*LPFPARRTVPS
Trigger: CGAAGGTACGGTCCTCCTGGCGGGGAACGGCAGGCAGCTGTGTCCAGCAAAGGAGTGCCTGGAGGGCAGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS CCA 72 bp CCCGCGCCGTTCACTTTCCAGTCGCTCGCTTTCAGGTaGGCCGGCCGGGATGTCTTCACTAGCAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: PAPFTFQSLAFR*AGRDVFTSRCW
Trigger: CCAGCACCTGCTAGTGAAGACATCCCGGCCGGCCCACCTGAAAGCGAGCGACTGGAAAGTGAACGGCGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000677996.1
ENST00000678381.1
CDS CCA 72 bp TATTGCCCTGGGAGGGCAGAGACAGCCATGGCCAGTTaGCAGGAGCAAGCCCAGGATCAGGGGCCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: YCPGRAETAMAS*QEQAQDQGPGL
Trigger: GAGGCCTGGCCCCTGATCCTGGGCTTGCTCCTGCCAACTGGCCATGGCTGTCTCTGCCCTCCCAGGGCAATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 72 bp CCCACGCTCAGACACCAGGCCTCCTCGTGGGGCTCTTaGCAGAGCAGCCCTCTGATGGGGTCTGGTCTCACC +
Preference number: 6 (lower is better)
Translates to: PTLRHQASSWGS*QSSPLMGSGLT
Trigger: GGTGAGACCAGACCCCATCAGAGGGCTGCTCTGCAAAGAGCCCCACGAGGAGGCCTGGTGTCTGAGCGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 90 bp CAGTCTTCTCTCTCCAGCGGCTGCCGGGCTGCGATGGCTGTAGGCTaGGGGTCCAGGCCAGACTCCACCCAGGGATGTGACACACCTGAC +
Preference number: 6 (lower is better)
Translates to: QSSLSSGCRAAMAVG*GSRPDSTQGCDTPD
Trigger: GTCAGGTGTGTCACATCCCTGGGTGGAGTCTGGCCTGGACCCCAAGCCTACAGCCATCGCAGCCCGGCAGCCGCTGGAGAGAGAAGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 72 bp CTCGCAGCTGGCCCAGCGAACGCGGGGCTGTCGTGGTaGCTTGAGGACTTCTCTCCTGCCTTTTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LAAGPANAGLSW*LEDFSPAFSCS
Trigger: GCTGCAGGAAAAGGCAGGAGAGAAGTCCTCAAGTCACCACGACAGCCCCGCGTTCGCTGGGCCAGCTGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp AACTCGCTGTGGTGGGAATGGGGATGGATCTCCGCATaGTCAGGACCGCCTGGTGGGGCTGTTGCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: NSLWWEWGWISA*SGPPGGAVAGQ
Trigger: CTGGCCAGCAACAGCCCCACCAGGCGGTCCTGAGCATGCGGAGATCCATCCCCATTCCCACCACAGCGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp CAGCAGGGTGACAGCCTTTGCACTTTGGCCAGTGAGTaGGCTGTGGCTGGGAGCTCGAGGACGCCACGAGAG +
Preference number: 6 (lower is better)
Translates to: QQGDSLCTLASE*AVAGSSRTPRE
Trigger: CTCTCGTGGCGTCCTCGAGCTCCCAGCCACAGCGCACTCACTGGCCAAAGTGCAAAGGCTGTCACCCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp GAAGATGCTGCCAGACTCTGCCCTCCAGGCACTCCTTaGCTGGACACAGCTGCCTGCCGTTCCCCGCCAGGA +
Preference number: 6 (lower is better)
Translates to: EDAARLCPPGTP*LDTAACRSPPG
Trigger: TCCTGGCGGGGAACGGCAGGCAGCTGTGTCCAGCAAAGGAGTGCCTGGAGGGCAGAGTCTGGCAGCATCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS CAA 90 bp CATTGTGCCCTCTACAGAAAGCACTTGCCGATGCGGGCCGAGTGCTaGAAGGAGCACGTTTCCCATCCTGGGGCCGTGAGTGCACCCCGG +
Preference number: 6 (lower is better)
Translates to: HCALYRKHLPMRAEC*KEHVSHPGAVSAPR
Trigger: CCGGGGTGCACTCACGGCCCCAGGATGGGAAACGTGCTCCTTCAAGCACTCGGCCCGCATCGGCAAGTGCTTTCTGTAGAGGGCACAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp CCCTGCCGGCCCTTTTTAATGCCATACTCGAAAGCCTaGTTAGCCAGTCGGCCGGGCCCGTCCACCGTCTTG +
Preference number: 6 (lower is better)
Translates to: PCRPFLMPYSKA*LASRPGPSTVL
Trigger: CAAGACGGTGGACGGGCCCGGCCGACTGGCTAAGCAGGCTTTCGAGTATGGCATTAAAAAGGGCCGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS GCA 72 bp TCTGGAGGTCTCCTCGGCGTGGGTGTGAGATGGAGGTaGGAACCACCACGTGCTCCAAGTAGACCACCCGCT +
Preference number: 6 (lower is better)
Translates to: SGGLLGVGVRWR*EPPRAPSRPPA
Trigger: AGCGGGTGGTCTACTTGGAGCACGTGGTGGTTCGCACCTCCATCTCACACCCACGCCGAGGAGACCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 72 bp GCGCAGGCGCTGGTCAGGGCCGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCTTTGCTTCTAGAGCCAAG +
Preference number: 6 (lower is better)
Translates to: AQALVRAVVRST*TKGMLFASRAK
Trigger: CTTGGCTCTAGAAGCAAAGAGCATCCCCTTAGTGCAGGTGCTGCGGACTACGGCCCTGACCAGCGCCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398185.6
CDS GCA 72 bp GCCCTCTACAGAAAGCACTTGCCGATGCGGGCCGAGTaGTTGAAGGAGCACGTTTCCCATCCTGGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: ALYRKHLPMRAE*LKEHVSHPGAV
Trigger: CACGGCCCCAGGATGGGAAACGTGCTCCTTCAAGCACTCGGCCCGCATCGGCAAGTGCTTTCTGTAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp CTCGATTCCTGCAGAGCACTTTGCATGCATCCGGCATaGCCATGGGGGCCCCAGGTCATGAGGAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: LDSCRALCMHPA*PWGPQVMRRCR
Trigger: CCTGCACCTCCTCATGACCTGGGGCCCCCATGGGCATGCCGGATGCATGCAAAGTGCTCTGCAGGAATCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp GGAGTGACGCCTGAAGCTACAGCTGGGGTGGACTCCTaGCTACTGCCCACCTGTCCCTCCTACGCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: GVTPEATAGVDS*LLPTCPSYAGK
Trigger: TTTCCCAGCGTAGGAGGGACAGGTGGGCAGTAGGCAGGAGTCCACCCCAGCTGTAGCTTCAGGCGTCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp ACCAGGGCCGAGCTGAGTCATTTAAAGAGATGTCAGTaGTCTGGAGGACCCAGGGGCCCAGTGCCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: TRAELSHLKRCQ*SGGPRGPVPPG
Trigger: GCCTGGGGGCACTGGGCCCCTGGGTCCTCCAGACCACTGACATCTCTTTAAATGACTCAGCTCGGCCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559430.1
ENST00000559499.1
CDS CCA 72 bp ACCCCTCACACCCATGCCTACCCAGCAGACCCGGCATaGGGCAGGTGTGCAGACAAGGTAAGTGTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: TPHTHAYPADPA*GRCADKVSVCC
Trigger: GCAGCACACACTTACCTTGTCTGCACACCTGCCCCATGCCGGGTCTGCTGGGTAGGCATGGGTGTGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CCA 72 bp GTGCCTGAGCCCTCATGGGTGTGCACCAGTGGTTGGTaGGTGCATCTGTCACCCAGGCCTTTGGGGAGCCTA +
Preference number: 6 (lower is better)
Translates to: VPEPSWVCTSGW*VHLSPRPLGSL
Trigger: TAGGCTCCCCAAAGGCCTGGGTGACAGATGCACCCACCAACCACTGGTGCACACCCATGAGGGCTCAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp GTGACAGCCTTTGCACTTTGGCCAGTGAGTGCGCTGTaGCTGGGAGCTCGAGGACGCCACGAGAGCCACATG +
Preference number: 6 (lower is better)
Translates to: VTAFALWPVSAL*LGARGRHESHM
Trigger: CATGTGGCTCTCGTGGCGTCCTCGAGCTCCCAGCCACAGCGCACTCACTGGCCAAAGTGCAAAGGCTGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp GGCTGGCCTGACCTTGGCAGGTGCACAGGCTCTGCCTaGTCGTTCAGGTGCAACCACCAACGTAGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: GWPDLGRCTGSA*SFRCNHQRRLR
Trigger: TCGGAGCCTACGTTGGTGGTTGCACCTGAACGACAAGGCAGAGCCTGTGCACCTGCCAAGGTCAGGCCAGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CAA 72 bp CAGCTGGCCCAGCGAACGCGGGGCTGTCGTGGTGACTaGAGGACTTCTCTCCTGCCTTTTCCTGCAGCGTCT +
Preference number: 6 (lower is better)
Translates to: QLAQRTRGCRGD*RTSLLPFPAAS
Trigger: AGACGCTGCAGGAAAAGGCAGGAGAGAAGTCCTCAAGTCACCACGACAGCCCCGCGTTCGCTGGGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp AGAGCTCCAGCATCCGCGAGCGGGACTGATGGGCACTaGAGGTGTGGTACGGGTGCTCTGCTGTGCCATACA +
Preference number: 6 (lower is better)
Translates to: RAPASASGTDGH*RCGTGALLCHT
Trigger: TGTATGGCACAGCAGAGCACCCGTACCACACCTTCAGTGCCCATCAGTCCCGCTCGCGGATGCTGGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000398185.6
ENST00000558951.5
ENST00000560902.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS TCA 72 bp AGCTGGCCCAGCGAACGCGGGGCTGTCGTGGTGACTTaGGGACTTCTCTCCTGCCTTTTCCTGCAGCGTCTT +
Preference number: 6 (lower is better)
Translates to: SWPSERGAVVVT*GLLSCLFLQRL
Trigger: AAGACGCTGCAGGAAAAGGCAGGAGAGAAGTCCTCAAGTCACCACGACAGCCCCGCGTTCGCTGGGCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp TTGGGGAGCCTAGCAGTGTCCTGTCATCGTGGCCTCTaGGGCCTGGCACATGCGGGGCATAATGGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: LGSLAVSCHRGL*GLAHAGHNGCS
Trigger: TGAGCACCCATTATGCCCCGCATGTGCCAGGCCTCAGAGGCCACGATGACAGGACACTGCTAGGCTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp GCTGACCAGAAGGCTGCTGTCACCTATATGTGGCCATaGCTGCTTACCCTCGGGGAGTGGGAGAGATGCCCC +
Preference number: 6 (lower is better)
Translates to: ADQKAAVTYMWP*LLTLGEWERCP
Trigger: GGGGCATCTCTCCCACTCCCCGAGGGTAAGCAGGCATGGCCACATATAGGTGACAGCAGCCTTCTGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp CTTGGCAGGTGCACAGGCTCTGCCTTGTCGTTCAGGTaGAACCACCAACGTAGGCTCCGAGGCAAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: LGRCTGSALSFR*NHQRRLRGKKG
Trigger: GCCCTTCTTGCCTCGGAGCCTACGTTGGTGGTTGCACCTGAACGACAAGGCAGAGCCTGTGCACCTGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp GCTGACAAAGCCAAGCTCGATTCCTGCAGAGCACTTTaGATGCATCCGGCATGCCCATGGGGGCCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: ADKAKLDSCRAL*MHPACPWGPQV
Trigger: GACCTGGGGCCCCCATGGGCATGCCGGATGCATGCAAAGTGCTCTGCAGGAATCGAGCTTGGCTTTGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp TTCAGGTGGGCCGGCCGGGATGTCTTCACTAGCAGGTaGTGGACGTCCCTCCAGGTTAACTGGCTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: FRWAGRDVFTSR*WTSLQVNWLLQ
Trigger: TTGCAGCAGCCAGTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAAGACATCCCGGCCGGCCCACCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678381.1
CDS CCA 72 bp AATTACCCATTGAGCCCAAAACTCCAGCTCAGCCACTaGGCTCTCGCCTTCCCACCCTCGCAGCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: NYPLSPKLQLSH*ALAFPPSQLAQ
Trigger: CTGGGCCAGCTGCGAGGGTGGGAAGGCGAGAGCCCAGTGGCTGAGCTGGAGTTTTGGGCTCAATGGGTAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 90 bp ACTCGGTCTCCACAGTGCTTGCATCAGCTGCCCACCTCCCCATTGTaGCCAGTTAAGGGTGGAACAGGCCCCATAGGCAGGGCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: TRSPQCLHQLPTSPL*PVKGGTGPIGRAWS
Trigger: GCTCCAAGCCCTGCCTATGGGGCCTGTTCCACCCTTAACTGGCAACAATGGGGAGGTGGGCAGCTGATGCAAGCACTGTGGAGACCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 90 bp GTGACTCGGTCTCCACAGTGCTTGCATCAGCTGCCCACCTCCCCATaGTTGCCAGTTAAGGGTGGAACAGGCCCCATAGGCAGGGCTTGG +
Preference number: 6 (lower is better)
Translates to: VTRSPQCLHQLPTSP*LPVKGGTGPIGRAW
Trigger: CCAAGCCCTGCCTATGGGGCCTGTTCCACCCTTAACTGGCAACAATGGGGAGGTGGGCAGCTGATGCAAGCACTGTGGAGACCGAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 90 bp TGGGCAGGGACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTaGCTATTCTGCTTCCCATCTTATCCCGCTGCTGCACGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: WAGTSRVVHQWGVST*LFCFPSYPAAARCL
Trigger: CAGACACCGTGCAGCAGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS CAA 90 bp ATCTCCAGACAGAATGTTCTAGGATGTCCTCGGAGGAGGACAGCCTaGGGGAGGGTCCTGAAGCAGTGCTCCCAGCTGCTGGTCCGGGTG +
Preference number: 6 (lower is better)
Translates to: ISRQNVLGCPRRRTA*GRVLKQCSQLLVRV
Trigger: CACCCGGACCAGCAGCTGGGAGCACTGCTTCAGGACCCTCCCCAAGGCTGTCCTCCTCCGAGGACATCCTAGAACATTCTGTCTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp CTAAGGGGATGCTCTTTGCTTCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGGCAGAGACTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: LRGCSLLLEPRR*CPPPWGQRLRS
Trigger: GGACCTCAGTCTCTGCCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAGAAGCAAAGAGCATCCCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398185.6
CDS TCA 72 bp GTTCTCGTCACACCTGTGGGAAGATACCGTTCCTGCTaGAGTCTGGGGAAGAGGCTCCACCACTCCGGGCTC +
Preference number: 6 (lower is better)
Translates to: VLVTPVGRYRSC*SLGKRLHHSGL
Trigger: GAGCCCGGAGTGGTGGAGCCTCTTCCCCAGACTTCAGCAGGAACGGTATCTTCCCACAGGTGTGACGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 72 bp CCAATGGTCCACCAGAACGCCACTGCCGCACCTTTATaGCCCGCGCCGTTCACTTTCCAGTCGCTCGCTTTC +
Preference number: 6 (lower is better)
Translates to: PMVHQNATAAPL*PAPFTFQSLAF
Trigger: GAAAGCGAGCGACTGGAAAGTGAACGGCGCGGGTCATAAAGGTGCGGCAGTGGCGTTCTGGTGGACCATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677996.1
ENST00000678381.1
CDS TCA 72 bp ACACAGGAGGGCACACTCATCACAGAAGGGTCAGCCTaGACCGGGCAACTGGCCATATACGTGGGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: TQEGTLITEGSA*TGQLAIYVGSQ
Trigger: CTGGGACCCCACGTATATGGCCAGTTGCCCGGTTCAGGCTGACCCTTCTGTGATGAGTGTGCCCTCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp TTCAGGTGGGCCGGCCGGGATGTCTTCACTAGCAGGTaGTGGACGTCCCTCCAGGTTAACTGGCTGTTTGCT +
Preference number: 6 (lower is better)
Translates to: FRWAGRDVFTSR*WTSLQVNWLFA
Trigger: AGCAAACAGCCAGTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAAGACATCCCGGCCGGCCCACCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000677996.1
CDS GCA 72 bp GTCCGAGGCGGCCACACACATGTGCTGCGATGGCACTaGTGTCCACTTCTTTGCCTCCACAACGAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: VRGGHTHVLRWH*CPLLCLHNESF
Trigger: GAAGCTCTCGTTGTGGAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGCCTCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 72 bp ATTCCAGGGCCACCCAATGGTCCACCAGAACGCCACTaGCGCACCTTTATGACCCGCGCCGTTCACTTTCCA +
Preference number: 6 (lower is better)
Translates to: IPGPPNGPPERH*RTFMTRAVHFP
Trigger: TGGAAAGTGAACGGCGCGGGTCATAAAGGTGCGGCAGTGGCGTTCTGGTGGACCATTGGGTGGCCCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677996.1
ENST00000678381.1
CDS GCA 72 bp GCGCAGGCGCTGGTCAGGGCCGTAGTCCGCAGCACCTaGACTAAGGGGATGCTCAGAGATTTGAAAGATGGT +
Preference number: 6 (lower is better)
Translates to: AQALVRAVVRST*TKGMLRDLKDG
Trigger: ACCATCTTTCAAATCTCTGAGCATCCCCTTAGTGCAGGTGCTGCGGACTACGGCCCTGACCAGCGCCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676598.1
CDS GCA 72 bp GCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACCCACGCAG +
Preference number: 6 (lower is better)
Translates to: ARLTPATVPAGA*TAQAVLVTPTQ
Trigger: CTGCGTGGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677528.1
CDS CCA 72 bp AGGTGGGCCGGCCGGGATGTCTTCACTAGCAGGTGCTaGACGTCCCTCCAGGTTAACTGGCTGTTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RWAGRDVFTSRC*TSLQVNWLFAS
Trigger: AGAAGCAAACAGCCAGTTAACCTGGAGGGACGTCCAGCACCTGCTAGTGAAGACATCCCGGCCGGCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000677996.1
CDS CCA 72 bp GGTAGATCTGGAGGTCTCCTCGGCGTGGGTGTGAGATaGAGGTGCGAACCACCACGTGCTCCAAGTAGACCA +
Preference number: 6 (lower is better)
Translates to: GRSGGLLGVGVR*RCEPPRAPSRP
Trigger: TGGTCTACTTGGAGCACGTGGTGGTTCGCACCTCCATCTCACACCCACGCCGAGGAGACCTCCAGATCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 72 bp GCGACATGGGCAGGGACGTCCCGCGTAGTCCACCAATaGGGTGTGAGCACCTTGCTATTCTGCTTCCCATCT +
Preference number: 6 (lower is better)
Translates to: ATWAGTSRVVHQ*GVSTLLFCFPS
Trigger: AGATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGTCCCTGCCCATGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS CCA 72 bp CACTCATCACAGAAGGGTCAGCCTGAACCGGGCAACTaGCCATATACGTGGGGTCCCAGGTCAGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: HSSQKGQPEPGN*PYTWGPRSELL
Trigger: CAGGAGCTCTGACCTGGGACCCCACGTATATGGCCAGTTGCCCGGTTCAGGCTGACCCTTCTGTGATGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp CTCTACAGAAAGCACTTGCCGATGCGGGCCGAGTGCTaGAAGGAGCACGTTTCCCATCCTGGGGCCGTGAGT +
Preference number: 6 (lower is better)
Translates to: LYRKHLPMRAEC*KEHVSHPGAVS
Trigger: ACTCACGGCCCCAGGATGGGAAACGTGCTCCTTCAAGCACTCGGCCCGCATCGGCAAGTGCTTTCTGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 72 bp CAGAATGTTCTAGGATGTCCTCGGAGGAGGACAGCCTaGGGGAGGGTCCTGAAGCAGTGCTCCCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QNVLGCPRRRTA*GRVLKQCSQLL
Trigger: CAGCAGCTGGGAGCACTGCTTCAGGACCCTCCCCAAGGCTGTCCTCCTCCGAGGACATCCTAGAACATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp GCCACAGGGCTGCGGGACATGCATTACCTGCTGGTCTaGACACTCCCCAGGCTGAAGTGGACGCAGTTCAAG +
Preference number: 6 (lower is better)
Translates to: ATGLRDMHYLLV*TLPRLKWTQFK
Trigger: CTTGAACTGCGTCCACTTCAGCCTGGGGAGTGTCAAGACCAGCAGGTAATGCATGTCCCGCAGCCCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 90 bp CCGAGGCAAGAAGGGCGGGCTGGGAAGGCTCCTCTCTTCAGTGACTaGGTCTGGGTCTCACTTCTGCACAGCCCTATCTTACAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: PRQEGRAGKAPLFSD*VWVSLLHSPILQER
Trigger: CCTCTCCTGTAAGATAGGGCTGTGCAGAAGTGAGACCCAGACCAAGTCACTGAAGAGAGGAGCCTTCCCAGCCCGCCCTTCTTGCCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CAA 90 bp ACACTCCCCAGGCTGAAGTGGACGCAGTTCAAGCACTGGTCTGCATaGGGGCCATCACAGCCTTTGTCACCACACTCCGGATGGCACACA +
Preference number: 6 (lower is better)
Translates to: TLPRLKWTQFKHWSA*GPSQPLSPHSGWHT
Trigger: TGTGTGCCATCCGGAGTGTGGTGACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000398185.6
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS CAA 90 bp CCACTGACCTTGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTCTCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PLTLLLRVADLGWQI*DFQGPLPFSLFSPA
Trigger: TGCTGGGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS CAA 90 bp CAGGTTCCCTTGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTCTCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: QVPLLLRVADLGWQI*DFQGPLPFSLFSPA
Trigger: TGCTGGGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS TCA 72 bp AACCAGGTAGATCTGGAGGTCTCCTCGGCGTGGGTGTaGGATGGAGGTGCGAACCACCACGTGCTCCAAGTA +
Preference number: 6 (lower is better)
Translates to: NQVDLEVSSAWV*DGGANHHVLQV
Trigger: TACTTGGAGCACGTGGTGGTTCGCACCTCCATCTCACACCCACGCCGAGGAGACCTCCAGATCTACCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS TCA 72 bp TCTTCTCTGCCTGGCCCCACGCAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTGATCAGCTCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: SSLPGPTQVPQV*WHSPHLISSES
Trigger: TGACTCAGAGCTGATCAGATGTGGGGAATGCCATCACACCTGCGGAACCTGCGTGGGGCCAGGCAGAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677962.1
ENST00000679007.1
CDS TCA 72 bp TCACCATTTCACAGACGGGGACATCGAGGCATGAGATaGTCTCAGAGGGAGCACACCTGCCCACTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: SPFHRRGHRGMR*SQREHTCPLAV
Trigger: CACGGCCAGTGGGCAGGTGTGCTCCCTCTGAGATCATCTCATGCCTCGATGTCCCCGTCTGTGAAATGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560785.1
CDS TCA 72 bp CAGGCGGTGAACTCACCCACGCAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTGATCAGCTCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: QAVNSPTQVPQV*WHSPHLISSES
Trigger: TGACTCAGAGCTGATCAGATGTGGGGAATGCCATCACACCTGCGGAACCTGCGTGGGTGAGTTCACCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677364.1
CDS TCA 72 bp CCGGCAACTAAATCTTTGCTTCTAGAGCCAAGGCGATaGTGCCCGCCACCATGGGGGCAGAGACTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: PATKSLLLEPRR*CPPPWGQRLRS
Trigger: GGACCTCAGTCTCTGCCCCCATGGTGGCGGGCATCATCGCCTTGGCTCTAGAAGCAAAGATTTAGTTGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678381.1
CDS GCA 72 bp CCCCAGGCTGAAGTGGACGCAGTTCAAGCACTGGTCTaGATTGGGGCCATCACAGCCTTTGTCACCACACTC +
Preference number: 6 (lower is better)
Translates to: PQAEVDAVQALV*IGAITAFVTTL
Trigger: GAGTGTGGTGACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000398185.6
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS GCA 72 bp GCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACCCCATCGT +
Preference number: 6 (lower is better)
Translates to: ARLTPATVPAGA*TAQAVLVTPHR
Trigger: ACGATGGGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557794.5
CDS GCA 72 bp GCGCTGCGGTGGACAGCCAGGAGGTTACGGCTTGCTTaGTTCTTCAAATACAACCTCACCCAGCTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: ALRWTARRLRLA*FFKYNLTQLSR
Trigger: CCTGCTGAGCTGGGTGAGGTTGTATTTGAAGAAGCAAGCAAGCCGTAACCTCCTGGCTGTCCACCGCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp GAGCGCGCTGCGGTGGACAGCCAGGAGGTTACGGCTTaGTTGCTTCTTCAAATACAACCTCACCCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: ERAAVDSQEVTA*LLLQIQPHPAQ
Trigger: CTGAGCTGGGTGAGGTTGTATTTGAAGAAGCAAGCAAGCCGTAACCTCCTGGCTGTCCACCGCAGCGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp GCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: ARLTPATVPAGA*TAQAVLVTPVG
Trigger: TCCCACAGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp GAGCACCTTGCTATTCTGCTTCCCATCTTATCCCGCTaGTGCACGGTGTCTGCCCACAGCAGGGACCCAACA +
Preference number: 6 (lower is better)
Translates to: EHLAILLPILSR*CTVSAHSRDPT
Trigger: TGTTGGGTCCCTGCTGTGGGCAGACACCGTGCAGCAGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 72 bp CCGGCATGGGGCAGGTGTGCAGACAAGGTAAGTGTGTaGTGCATGAACAGGAGAACACCATGCAGATGCCCC +
Preference number: 6 (lower is better)
Translates to: PAWGRCADKVSV*CMNRRTPCRCP
Trigger: GGGGCATCTGCATGGTGTTCTCCTGTTCATGCAGCACACACTTACCTTGTCTGCACACCTGCCCCATGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp CGTTGCCAAATGTCCCCTGGCTTGGGTGCTCAGAGATaGTGCTCCTGGGGAGATAAAGCTGTCAGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RCQMSPGLGAQR*CSWGDKAVRCR
Trigger: CCTGCACCTGACAGCTTTATCTCCCCAGGAGCAGCATCTCTGAGCACCCAAGCCAGGGGACATTTGGCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp TCTCTTGTCCGAGGCGGCCACACACATGTGCTGCGATaGCACTGCTGTCCACTTCTTTGCCTCCACAACGAG +
Preference number: 6 (lower is better)
Translates to: SLVRGGHTHVLR*HCCPLLCLHNE
Trigger: CTCGTTGTGGAGGCAAAGAAGTGGACAGCAGTGCCATCGCAGCACATGTGTGTGGCCGCCTCGGACAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000331826.12
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 72 bp CACTTCCTGCTGGTCTTGACACTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGGTCTGCATTGGGGCCA +
Preference number: 6 (lower is better)
Translates to: HFLLVLTLPRLK*TQFKHWSALGP
Trigger: TGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAGTGTCAAGACCAGCAGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000559605.1
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 72 bp TCCAGACGTTGCCAAATGTCCCCGTTGCTGCACGTGTaGTTGGTGATGCAGGAGGTCCCCAGCTGTGTGAAG +
Preference number: 6 (lower is better)
Translates to: SRRCQMSPLLHV*LVMQEVPSCVK
Trigger: CTTCACACAGCTGGGGACCTCCTGCATCACCAACCACACGTGCAGCAACGGGGACATTTGGCAACGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS CCA 72 bp CCACTGACCTTGCTTCTCCGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: PLTLLLRVADLG*QILDFQGPLPF
Trigger: GAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS CCA 72 bp AGAGACACAGGAAAAGAAGCAGGTATCAGGGATGGCTaGCAGAAGACCATGCCCCAGGCCTGCTTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: RDTGKEAGIRDG*QKTMPQACFRA
Trigger: GGCCCTGAAGCAGGCCTGGGGCATGGTCTTCTGCCAGCCATCCCTGATACCTGCTTCTTTTCCTGTGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560785.1
CDS CCA 72 bp CCCCAGGTGCAGCATCGCTTCAGCCTGGGTGGGAGGTaGGTTTTATTCCTAGTGTGTCTGAGGATGCTGAGC +
Preference number: 6 (lower is better)
Translates to: PQVQHRFSLGGR*VLFLVCLRMLS
Trigger: GCTCAGCATCCTCAGACACACTAGGAATAAAACCCACCTCCCACCCAGGCTGAAGCGATGCTGCACCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 72 bp ACTCGAGCTGACCAGAAGGCTGCTGTCACCTATATGTaGCCATGCCTGCTTACCCTCGGGGAGTGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: TRADQKAAVTYM*PCLLTLGEWER
Trigger: TCTCTCCCACTCCCCGAGGGTAAGCAGGCATGGCCACATATAGGTGACAGCAGCCTTCTGGTCAGCTCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 72 bp CAGGTTCCCTTGCTTCTCCGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: QVPLLLRVADLG*QILDFQGPLPF
Trigger: GAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS CAA 72 bp CGCGCTGCGGTGGACAGCCAGGAGGTTACGGCTTGCTaGCTTCTTCAAATACAACCTCACCCAGCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: RAAVDSQEVTAC*LLQIQPHPAQQ
Trigger: CTGCTGAGCTGGGTGAGGTTGTATTTGAAGAAGCAAGCAAGCCGTAACCTCCTGGCTGTCCACCGCAGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 72 bp GGAGCGCGCTGCGGTGGACAGCCAGGAGGTTACGGCTaGCTTGCTTCTTCAAATACAACCTCACCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: GARCGGQPGGYG*LASSNTTSPSS
Trigger: TGAGCTGGGTGAGGTTGTATTTGAAGAAGCAAGCAAGCCGTAACCTCCTGGCTGTCCACCGCAGCGCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 72 bp TCTGCCACCGGAACACGTGTTTTAGTCCAGGTTCCCTaGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATC +
Preference number: 6 (lower is better)
Translates to: SATGTRVLVQVP*LLRVADLGWQI
Trigger: GATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAACCTGGACTAAAACACGTGTTCCGGTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS CAA 90 bp CAACTTCCCTTGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTCTCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: QLPLLLRVADLGWQI*DFQGPLPFSLFSPA
Trigger: TGCTGGGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CAA 90 bp AATGTCTCCAGACGTTGCCAAATGTCCCCGTTGCTGCACGTGTGGTaGGTGATGCAGGAGGTCCCCAGCTGTGTGAAGCCCGTCTTACAC +
Preference number: 6 (lower is better)
Translates to: NVSRRCQMSPLLHVW*VMQEVPSCVKPVLH
Trigger: GTGTAAGACGGGCTTCACACAGCTGGGGACCTCCTGCATCACCAACCACACGTGCAGCAACGGGGACATTTGGCAACGTCTGGAGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558864.5
CDS TCA 72 bp CCTGTTGCTGGAGCCATTTCACCTGGGGGTCCATTCTaGGGAAGGTGTGAGGGCCTCTGCTACTCAAGGTTG +
Preference number: 6 (lower is better)
Translates to: PVAGAISPGGPF*GRCEGLCYSRL
Trigger: CAACCTTGAGTAGCAGAGGCCCTCACACCTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCAGCAACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
ENST00000678918.1
CDS TCA 72 bp CGCAGGTTCCGCAGGTGTGATGGCATTCCCCACATCTaGTCAGCTCTGAGTCAAAGTAGGTGCCTGGCTCAC +
Preference number: 6 (lower is better)
Translates to: RRFRRCDGIPHI*SALSQSRCLAH
Trigger: GTGAGCCAGGCACCTACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCCATCACACCTGCGGAACCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS TCA 72 bp GCCCTTGCACATTCTGGTGGCCCAGCCACCAAACCCTaGTGCCCCAGTACAGGTTATGACTTTCCCCACAGA +
Preference number: 6 (lower is better)
Translates to: ALAHSGGPATKP*CPSTGYDFPHR
Trigger: TCTGTGGGGAAAGTCATAACCTGTACTGGGGCATCAGGGTTTGGTGGCTGGGCCACCAGAATGTGCAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 72 bp GACTCCACCCAGGGATGTGACACACCTGACTCGAGCTaGCCAGAAGGCTGCTGTCACCTATATGTGGCCATG +
Preference number: 6 (lower is better)
Translates to: DSTQGCDTPDSS*PEGCCHLYVAM
Trigger: CATGGCCACATATAGGTGACAGCAGCCTTCTGGTCAGCTCGAGTCAGGTGTGTCACATCCCTGGGTGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 72 bp TCCTTTCTTTTCAAAGCTGGCCCTGCTGGAAGGTCCTaGGGGTGCGCATGGTTTCCCAAGGGCATCGTGAGG +
Preference number: 6 (lower is better)
Translates to: SFLFKAGPAGRS*GCAWFPKGIVR
Trigger: CCTCACGATGCCCTTGGGAAACCATGCGCACCCTCAGGACCTTCCAGCAGGGCCAGCTTTGAAAAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp GCAGTTCTCGTCACACCCACGCAGGTTCCGCAGGTGTaGTGGCATTCCCCACATCTGATCAGCTCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: AVLVTPTQVPQV*WHSPHLISSES
Trigger: TGACTCAGAGCTGATCAGATGTGGGGAATGCCATCACACCTGCGGAACCTGCGTGGGTGTGACGAGAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677528.1
CDS GCA 72 bp TCCAGTCGTGGAAGTGGAAGTTTTTCGCACAGTGAATaGACTCTTCTCTGCCTGGCCCCACGCAGGTTCCGC +
Preference number: 6 (lower is better)
Translates to: SSRGSGSFSHSE*TLLCLAPRRFR
Trigger: GCGGAACCTGCGTGGGGCCAGGCAGAGAAGAGTGCATTCACTGTGCGAAAAACTTCCACTTCCACGACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677962.1
ENST00000679007.1
CDS GCA 72 bp GGGGCAGTTCTTTGCTTTATACAGATGTCCCCTCCCTaGTGTGTGAAGCCTTCCCACGCTCAGACACCAGGC +
Preference number: 6 (lower is better)
Translates to: GAVLCFIQMSPP*CVKPSHAQTPG
Trigger: GCCTGGTGTCTGAGCGTGGGAAGGCTTCACACAGCAGGGAGGGGACATCTGTATAAAGCAAAGAACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp TCACAATTCTCCCTGGCAGGGGAAGACTGTGGGAGGTaGCCCAGCACCTTAGGTAGGCTCCTGGTTACAAAG +
Preference number: 6 (lower is better)
Translates to: SQFSLAGEDCGR*PSTLGRLLVTK
Trigger: CTTTGTAACCAGGAGCCTACCTAAGGTGCTGGGGCACCTCCCACAGTCTTCCCCTGCCAGGGAGAATTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp AACAGGAACGATGTCTGTCAAACACCCATTTCTAGCTaGCCGGCAGCGGTGACACCCCAGAGGAACAGGCTG +
Preference number: 6 (lower is better)
Translates to: NRNDVCQTPISS*PAAVTPQRNRL
Trigger: CAGCCTGTTCCTCTGGGGTGTCACCGCTGCCGGGCAGCTAGAAATGGGTGTTTGACAGACATCGTTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS GCA 72 bp GCAGGTGCTGGACGTCCCTCCAGGTTAACTGGCTGCTaGAATGACACAACACACCCTAGAGTCCACACAGCT +
Preference number: 6 (lower is better)
Translates to: AGAGRPSRLTGC*NDTTHPRVHTA
Trigger: AGCTGTGTGGACTCTAGGGTGTGTTGTGTCATTGCAGCAGCCAGTTAACCTGGAGGGACGTCCAGCACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678381.1
CDS CCA 72 bp CAACTTCCCTTGCTTCTCCGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: QLPLLLRVADLG*QILDFQGPLPF
Trigger: GAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398185.6
ENST00000558951.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 72 bp ACACTCCCCAGGCTGAAGTGGACGCAGTTCAAGCACTaGTCTGCATTGGGGCCATCACAGCCTTTGTCACCA +
Preference number: 6 (lower is better)
Translates to: TLPRLKWTQFKH*SALGPSQPLSP
Trigger: TGGTGACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000398185.6
ENST00000559605.1
ENST00000560902.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS CCA 72 bp TCTGGAGCCCCAGGTGCAGCATCGCTTCAGCCTGGGTaGGAGGTGGGTTTTATTCCTAGTGTGTCTGAGGAT +
Preference number: 6 (lower is better)
Translates to: SGAPGAASLQPG*EVGFIPSVSED
Trigger: ATCCTCAGACACACTAGGAATAAAACCCACCTCCCACCCAGGCTGAAGCGATGCTGCACCTGGGGCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 72 bp AACAAAGGGACGAAGGCCCCTCAGCAGCTCTGTAAATaGGCTCCTGTCCACAGTGGGGTGATGCAACATGCC +
Preference number: 6 (lower is better)
Translates to: NKGTKAPQQLCK*APVHSGVMQHA
Trigger: GGCATGTTGCATCACCCCACTGTGGACAGGAGCCCATTTACAGAGCTGCTGAGGGGCCTTCGTCCCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS CCA 72 bp ATGACACCCCTTCCTACACATTCCAGGGCCACCCAATaGTCCACCAGAACGCCACTGCCGCACCTTTATGAC +
Preference number: 6 (lower is better)
Translates to: MTPLPTHSRATQ*STRTPLPHLYD
Trigger: GTCATAAAGGTGCGGCAGTGGCGTTCTGGTGGACCATTGGGTGGCCCTGGAATGTGTAGGAAGGGGTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677996.1
ENST00000678381.1
CDS CCA 72 bp CATTACCTGCTGGTCTTGACACTCCCCAGGCTGAAGTaGACGCAGTTCAAGCACTGGTCTGCATTGGGGCCA +
Preference number: 6 (lower is better)
Translates to: HYLLVLTLPRLK*TQFKHWSALGP
Trigger: TGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCACTTCAGCCTGGGGAGTGTCAAGACCAGCAGGTAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp ACGTCCCGCGTAGTCCACCAATGGGGTGTGAGCACCTaGCTATTCTGCTTCCCATCTTATCCCGCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: TSRVVHQWGVST*LFCFPSYPAAA
Trigger: TGCAGCAGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTACGCGGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS CAA 90 bp AAGATCACCTTGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTCTCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: KITLLLRVADLGWQI*DFQGPLPFSLFSPA
Trigger: TGCTGGGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611967.4
ENST00000676494.1
CDS TCA 72 bp CAGGTCCCTTCAAACTCCTCAATGTTGCTCCCACCCTaGATAAGACAGGTTGCCCTGCCCTGTTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: QVPSNSSMLLPP*IRQVALPCSGS
Trigger: GGACCCAGAACAGGGCAGGGCAACCTGTCTTATTCAGGGTGGGAGCAACATTGAGGAGTTTGAAGGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557794.5
CDS TCA 72 bp TTCTTTGCTTTATACAGATGTCCCCTCCCTGCTGTGTaGAGCCTTCCCACGCTCAGACACCAGGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: FFALYRCPLPAV*SLPTLRHQASS
Trigger: CGAGGAGGCCTGGTGTCTGAGCGTGGGAAGGCTTCACACAGCAGGGAGGGGACATCTGTATAAAGCAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp CGCACCTGTCTCTTCACCCTTCGTTTCACTTCCTGTTaGTGGAGCCATTTCACCTGGGGGTCCATTCTGAGG +
Preference number: 6 (lower is better)
Translates to: RTCLFTLRFTSC*WSHFTWGSILR
Trigger: CCTCAGAATGGACCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGAAGGGTGAAGAGACAGGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
ENST00000678918.1
CDS GCA 72 bp ACCTGGGATGGCAGATCTTGGATTTCCAAGGTCCACTaGCCTTCAGCCTTTTCTCCCCAGCAGTGGACAGTC +
Preference number: 6 (lower is better)
Translates to: TWDGRSWISKVH*PSAFSPQQWTV
Trigger: GACTGTCCACTGCTGGGGAGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 72 bp GCCCGTCTTACACCTGCTACAGTTCCTGCTGGAGCCTaGACAGCTCAAGCAGTTCTCGTCACACAGACAATG +
Preference number: 6 (lower is better)
Translates to: ARLTPATVPAGA*TAQAVLVTQTM
Trigger: CATTGTCTGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTCCAGCAGGAACTGTAGCAGGTGTAAGACGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559430.1
CDS GCA 72 bp AGATTCCCAAGAGCCACTGACCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGATCTTGGATTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: RFPRATDLASPG*GPGMADLGFPR
Trigger: CCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTCAGTGGCTCTTGGGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS GCA 72 bp CACCTTGCTATTCTGCTTCCCATCTTATCCCGCTGCTaGACGGTGTCTGCCCACAGCAGGGACCCAACAAAT +
Preference number: 6 (lower is better)
Translates to: HLAILLPILSRC*TVSAHSRDPTN
Trigger: ATTTGTTGGGTCCCTGCTGTGGGCAGACACCGTGCAGCAGCGGGATAAGATGGGAAGCAGAATAGCAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 72 bp GTAGTCCACCAATGGGGTGTGAGCACCTTGCTATTCTaGTTCCCATCTTATCCCGCTGCTGCACGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: VVHQWGVSTLLF*FPSYPAAARCL
Trigger: CAGACACCGTGCAGCAGCGGGATAAGATGGGAAGCAGAATAGCAAGGTGCTCACACCCCATTGGTGGACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619160.4
ENST00000622483.4
CDS GCA 72 bp CTCCTCTCTTCAGTGACTTGGTCTGGGTCTCACTTCTaGACAGCCCTATCTTACAGGAGAGGAGACCCAGCG +
Preference number: 6 (lower is better)
Translates to: LLSSVTWSGSHF*TALSYRRGDPA
Trigger: CGCTGGGTCTCCTCTCCTGTAAGATAGGGCTGTGCAGAAGTGAGACCCAGACCAAGTCACTGAAGAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp ATGCCCCTTAGTGCTGACAAAGCCAAGCTCGATTCCTaGAGAGCACTTTGCATGCATCCGGCATGCCCATGG +
Preference number: 6 (lower is better)
Translates to: MPLSADKAKLDS*RALCMHPACPW
Trigger: CCATGGGCATGCCGGATGCATGCAAAGTGCTCTGCAGGAATCGAGCTTGGCTTTGTCAGCACTAAGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp ATCCACGAGGACACTCTAGATGCTGTTCCTGGGCGGTaGTGGTATCCTGGGTTCCAGATGCCACTCACCATT +
Preference number: 6 (lower is better)
Translates to: IHEDTLDAVPGR*WYPGFQMPLTI
Trigger: AATGGTGAGTGGCATCTGGAACCCAGGATACCAGCACCGCCCAGGAACAGCATCTAGAGTGTCCTCGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp TTGCCTTTCATCCAGAGAGACGCCTTCTCCATCTACTaGAGTCCCGCGGATCCCTGTGTCAGGATATCGCAG +
Preference number: 6 (lower is better)
Translates to: LPFIQRDAFSIY*SPADPCVRISQ
Trigger: CTGCGATATCCTGACACAGGGATCCGCGGGACTGCAGTAGATGGAGAAGGCGTCTCTCTGGATGAAAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp TGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTTaGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTCT +
Preference number: 6 (lower is better)
Translates to: CFSGLRTWDGRS*ISKVHCPSAFS
Trigger: AGAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 72 bp AAGATCACCTTGCTTCTCCGGGTTGCGGACCTGGGATaGCAGATCTTGGATTTCCAAGGTCCACTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: KITLLLRVADLG*QILDFQGPLPF
Trigger: GAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611967.4
ENST00000676494.1
CDS CCA 72 bp GTCTCAAGATCACCTTGCTTCTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATTTCCAAGGTCCACTGC +
Preference number: 6 (lower is better)
Translates to: VSRSPCFSGLRT*DGRSWISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611967.4
ENST00000676494.1
CDS CCA 72 bp GAGCCTGCACAGCTCAAGCAGTTCTCGTCACACCTGTaGGAAGATACCGTTCCTGCTGAAGTCTGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: EPAQLKQFSSHL*EDTVPAEVWGR
Trigger: TCTTCCCCAGACTTCAGCAGGAACGGTATCTTCCCACAGGTGTGACGAGAACTGCTTGAGCTGTGCAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 72 bp CACGAGGACACTCTAGATGCTGTTCCTGGGCGGTGCTaGTATCCTGGGTTCCAGATGCCACTCACCATTTCT +
Preference number: 6 (lower is better)
Translates to: HEDTLDAVPGRC*YPGFQMPLTIS
Trigger: AGAAATGGTGAGTGGCATCTGGAACCCAGGATACCAGCACCGCCCAGGAACAGCATCTAGAGTGTCCTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp TGTGTGTATCCACGAGGACACTCTAGATGCTGTTCCTaGGCGGTGCTGGTATCCTGGGTTCCAGATGCCACT +
Preference number: 6 (lower is better)
Translates to: CVYPRGHSRCCS*AVLVSWVPDAT
Trigger: AGTGGCATCTGGAACCCAGGATACCAGCACCGCCCAGGAACAGCATCTAGAGTGTCCTCGTGGATACACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp TTGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTaGGATTTCCAAGGTCCACTGCCCTTCAGCCTTTTC +
Preference number: 6 (lower is better)
Translates to: LLLRVADLGWQI*DFQGPLPFSLF
Trigger: GAAAAGGCTGAAGGGCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CAA 72 bp TTCAAGCACTGGTCTGCATTGGGGCCATCACAGCCTTaGTCACCACACTCCGGATGGCACACACTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: FKHWSALGPSQP*SPHSGWHTLVC
Trigger: ACAGACCAGTGTGTGCCATCCGGAGTGTGGTGACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000622483.4
ENST00000677364.1
CDS CAA 72 bp GTGTCTGCATGTCTTTTCTCCTGTCTGACCTCACTATaGCCCTGGGAGGGCAGAGACAGCCATGGCCAGTTG +
Preference number: 6 (lower is better)
Translates to: VSACLFSCLTSL*PWEGRDSHGQL
Trigger: CAACTGGCCATGGCTGTCTCTGCCCTCCCAGGGCAATAGTGAGGTCAGACAGGAGAAAAGACATGCAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 90 bp CCAGGGCTATTTCTAATGCAGGGTAAACGTGACCTCAGGGGACGGTaGGTGCACTACAGCCCAAGGGCCACATCCAGCATTTATCCTGGA +
Preference number: 6 (lower is better)
Translates to: PGLFLMQGKRDLRGR*VHYSPRATSSIYPG
Trigger: TCCAGGATAAATGCTGGATGTGGCCCTTGGGCTGTAGTGCACCAACCGTCCCCTGAGGTCACGTTTACCCTGCATTAGAAATAGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 72 bp AATGCAGGTACCACATGTTGGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGTCACTTCGCACCTGTC +
Preference number: 6 (lower is better)
Translates to: NAGTTCWTKWGR*SKGPAGHFAPV
Trigger: GACAGGTGCGAAGTGACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGTCCAACATGTGGTACCTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
ENST00000678918.1
CDS TCA 72 bp AGATACAAAAGCTGTCATGAGATTCCCAAGAGCCACTaGCCTTGCTTCTCCGGGTTGCGGACCTGGGATGGC +
Preference number: 6 (lower is better)
Translates to: RYKSCHEIPKSH*PCFSGLRTWDG
Trigger: GCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTCAGTGGCTCTTGGGAATCTCATGACAGCTTTTGTATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558154.2
CDS TCA 72 bp AATCCAGGTACCACATGTTGGACCAAATGGGGTCGTTaGAGTAAAGGGCCTGCGGGTCACTTCGCACCTGTC +
Preference number: 6 (lower is better)
Translates to: NPGTTCWTKWGR*SKGPAGHFAPV
Trigger: GACAGGTGCGAAGTGACCCGCAGGCCCTTTACTTCAACGACCCCATTTGGTCCAACATGTGGTACCTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS TCA 72 bp AGTAGCTGTGACAGAGGCAGTGTGGCCCCAAAAGCCTaGACGACTGACCATTGTGCCCTCTACAGAAAGCAC +
Preference number: 6 (lower is better)
Translates to: SSCDRGSVAPKA*TTDHCALYRKH
Trigger: GTGCTTTCTGTAGAGGGCACAATGGTCAGTCGTTCAGGCTTTTGGGGCCACACTGCCTCTGTCACAGCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 72 bp TTTTGCTGGGGCACGCAAAGCCCTCTTCACTCGTCTTaGAGTCTCCAGACCTTGCCAGTGTTAGACCCAGTG +
Preference number: 6 (lower is better)
Translates to: FCWGTQSPLHSS*SLQTLPVLDPV
Trigger: CACTGGGTCTAACACTGGCAAGGTCTGGAGACTTCAAGACGAGTGAAGAGGGCTTTGCGTGCCCCAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp GACATGGAGGGGCTAAGGATACAACTGGAAAGTCACTaGGTGGTGAGCCACAGGGCTGCGGGACATGCATTA +
Preference number: 6 (lower is better)
Translates to: DMEGLRIQLESH*VVSHRAAGHAL
Trigger: TAATGCATGTCCCGCAGCCCTGTGGCTCACCACTCAGTGACTTTCCAGTTGTATCCTTAGCCCCTCCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp GGTCCTGAGGGTGCGCATGGTTTCCCAAGGGCATCGTaGGGTTCGTATTTGACTTTTGGAACTGTCGGCTCT +
Preference number: 6 (lower is better)
Translates to: GPEGAHGFPRAS*GSYLTFGTVGS
Trigger: AGAGCCGACAGTTCCAAAAGTCAAATACGAACCTCACGATGCCCTTGGGAAACCATGCGCACCCTCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp AATGTCGATGTAGTTGGGTCTGATGCCCAGCGACTTTaGCTCGACCACATCTGTGACATCGCCGTCCAGCAT +
Preference number: 6 (lower is better)
Translates to: NVDVVGSDAQRL*LDHICDIAVQH
Trigger: ATGCTGGACGGCGATGTCACAGATGTGGTCGAGGCAAAGTCGCTGGGCATCAGACCCAACTACATCGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS GCA 72 bp CAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGATCTTGGATTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: QQESQDHLASPG*GPGMADLGFPR
Trigger: CCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611967.4
ENST00000676494.1
CDS GCA 72 bp GGCTCCATTCTTTCAACTTCCCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGATCTTGGATTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: GSILSTSLASPG*GPGMADLGFPR
Trigger: CCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAATGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398185.6
ENST00000558951.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 72 bp ACGTGTTTTAGTCCAGGTTCCCTTGCTTCTCCGGGTTaGGGACCTGGGATGGCAGATCTTGGATTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: TCFSPGSLASPG*GPGMADLGFPR
Trigger: CCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAACCTGGACTAAAACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS CCA 72 bp TCTTTCAACTTCCCTTGCTTCTCCGGGTTGCGGACCTaGGATGGCAGATCTTGGATTTCCAAGGTCCACTGC +
Preference number: 6 (lower is better)
Translates to: SFNFPCFSGLRT*DGRSWISKVHC
Trigger: GCAGTGGACCTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398185.6
ENST00000558951.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 72 bp GCTTCTTCAAATACAACCTCACCCAGCTCAGCAGGATaGCAGGGGCCTCGGTTTTCCATTGCTCTAACCAGG +
Preference number: 6 (lower is better)
Translates to: ASSNTTSPSSAG*QGPRFSIALTR
Trigger: CCTGGTTAGAGCAATGGAAAACCGAGGCCCCTGCCATCCTGCTGAGCTGGGTGAGGTTGTATTTGAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CCA 72 bp GCTGTTTCATTCACTCACTTGCACCAGTCATCATGCTaGGACCAGCCAGCACCTTTGACTTCCACGTGGAGG +
Preference number: 6 (lower is better)
Translates to: AVSFTHLHQSSC*DQPAPLTSTWR
Trigger: CCTCCACGTGGAAGTCAAAGGTGCTGGCTGGTCCCAGCATGATGACTGGTGCAAGTGAGTGAATGAAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp TCGCACCTGTCTCTTCACCCTTCGTTTCACTTCCTGTaGCTGGAGCCATTTCACCTGGGGGTCCATTCTGAG +
Preference number: 6 (lower is better)
Translates to: SHLSLHPSFHFL*LEPFHLGVHSE
Trigger: CTCAGAATGGACCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGAAGGGTGAAGAGACAGGTGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
ENST00000678918.1
CDS CAA 72 bp GCCTGGACATTCATTTCCGACCGGCAGCGACTGTTCTaGTCGCCACAATGCAGGTACCACATGTTGGACCAA +
Preference number: 6 (lower is better)
Translates to: AWTFISDRQRLF*SPQCRYHMLDQ
Trigger: TTGGTCCAACATGTGGTACCTGCATTGTGGCGACAAGAACAGTCGCTGCCGGTCGGAAATGAATGTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
ENST00000678918.1
CDS CAA 72 bp GCAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGATCTTGGATTTCCAAG +
Preference number: 6 (lower is better)
Translates to: ATGVSRSPCFSG*RTWDGRSWISK
Trigger: CTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331826.12
ENST00000559417.2
ENST00000611967.4
ENST00000676494.1
CDS CAA 72 bp TTTCTAATGCAGGGTAAACGTGACCTCAGGGGACGGTaGGTGCACTACAGCCCAAGGGCCACATCCAGCATT +
Preference number: 6 (lower is better)
Translates to: FLMQGKRDLRGR*VHYSPRATSSI
Trigger: AATGCTGGATGTGGCCCTTGGGCTGTAGTGCACCAACCGTCCCCTGAGGTCACGTTTACCCTGCATTAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 72 bp GTTTTGCTGGGGCACGCAAAGCCCTCTTCACTCGTCTaGAAGTCTCCAGACCTTGCCAGTGTTAGACCCAGT +
Preference number: 6 (lower is better)
Translates to: VLLGHAKPSSLV*KSPDLASVRPS
Trigger: ACTGGGTCTAACACTGGCAAGGTCTGGAGACTTCAAGACGAGTGAAGAGGGCTTTGCGTGCCCCAGCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 90 bp CTTGTTCAATCTGCCACCGGAACACGTGTTTTAGTCCAGGTTCCCTaGCTTCTCCGGGTTGCGGACCTGGGATGGCAGATCTTGGATTTC +
Preference number: 6 (lower is better)
Translates to: LVQSATGTRVLVQVP*LLRVADLGWQILDF
Trigger: GAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAACCTGGACTAAAACACGTGTTCCGGTGGCAGATTGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS CAA 90 bp CCAACCCCAGGCCTGTCTGATGTCTCTCTTCTGTGGTCAGTTGATTaGCAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTGCGGA +
Preference number: 6 (lower is better)
Translates to: PTPGLSDVSLLWSVD*QQESQDHLASPGCG
Trigger: TCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGACATCAGACAGGCCTGGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CAA 90 bp GCAGTTCTGAGGTTCCTACGTACACAGGTGGAGAGGCTGGAGGCCTaGCATAGAACCTGGGAATCCTTTCTTTTCAAAGCTGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: AVLRFLRTQVERLEA*HRTWESFLFKAGPA
Trigger: AGCAGGGCCAGCTTTGAAAAGAAAGGATTCCCAGGTTCTATGCAAGGCCTCCAGCCTCTCCACCTGTGTACGTAGGAACCTCAGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp GCAGGTGTGATGGCATTCCCCACATCTGATCAGCTCTaGGTCAAAGTAGGTGCCTGGCTCACAGTCAGGAAT +
Preference number: 6 (lower is better)
Translates to: AGVMAFPTSDQL*VKVGAWLTVRN
Trigger: ATTCCTGACTGTGAGCCAGGCACCTACTTTGACTCAGAGCTGATCAGATGTGGGGAATGCCATCACACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS TCA 72 bp CACATGCGGGGCATAATGGGTGCTCAGGGAAGTTTGTaGAATGAGAATGGACAACAGGGCAGCTGCAGGACT +
Preference number: 6 (lower is better)
Translates to: HMRGIMGAQGSL*NENGQQGSCRT
Trigger: AGTCCTGCAGCTGCCCTGTTGTCCATTCTCATTTCACAAACTTCCCTGAGCACCCATTATGCCCCGCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp GGACTGATGGGCACTGAAGGTGTGGTACGGGTGCTCTaGTGTGCCATACAGTATGAGGCTCCATTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: GLMGTEGVVRVL*CAIQYEAPFFQ
Trigger: TTGAAAGAATGGAGCCTCATACTGTATGGCACAGCAGAGCACCCGTACCACACCTTCAGTGCCCATCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000398185.6
ENST00000558951.5
ENST00000560902.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS GCA 72 bp ACAGCTGTTTCATTCACTCACTTGCACCAGTCATCATaGTGGGACCAGCCAGCACCTTTGACTTCCACGTGG +
Preference number: 6 (lower is better)
Translates to: TAVSFTHLHQSS*WDQPAPLTSTW
Trigger: CCACGTGGAAGTCAAAGGTGCTGGCTGGTCCCAGCATGATGACTGGTGCAAGTGAGTGAATGAAACAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp CTTCCAGTTGTGACAACCCAAAATGTCTCCAGACGTTaGCAAATGTCCCCTGGCTTGGGTGCTCAGAGATGC +
Preference number: 6 (lower is better)
Translates to: LPVVTTQNVSRR*QMSPGLGAQRC
Trigger: GCATCTCTGAGCACCCAAGCCAGGGGACATTTGGCAACGTCTGGAGACATTTTGGGTTGTCACAACTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp ACCTGTCTCTTCACCCTTCGTTTCACTTCCTGTTGCTaGAGCCATTTCACCTGGGGGTCCATTCTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: TCLFTLRFTSCC*SHFTWGSILRK
Trigger: CTTCCTCAGAATGGACCCCCAGGTGAAATGGCTCCAGCAACAGGAAGTGAAACGAAGGGTGAAGAGACAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
ENST00000678918.1
CDS CCA 72 bp TTTCCCAAGGGCATCGTGAGGTTCGTATTTGACTTTTaGAACTGTCGGCTCTGGCAAAACCCTCTCTCGGGC +
Preference number: 6 (lower is better)
Translates to: FPKGIVRFVFDF*NCRLWQNPLSG
Trigger: GCCCGAGAGAGGGTTTTGCCAGAGCCGACAGTTCCAAAAGTCAAATACGAACCTCACGATGCCCTTGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 72 bp AGGCTCCATTCTTTCAACTTCCCTTGCTTCTCCGGGTaGCGGACCTGGGATGGCAGATCTTGGATTTCCAAG +
Preference number: 6 (lower is better)
Translates to: RLHSFNFPCFSG*RTWDGRSWISK
Trigger: CTTGGAAATCCAAGATCTGCCATCCCAGGTCCGCAACCCGGAGAAGCAAGGGAAGTTGAAAGAATGGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398185.6
ENST00000558951.5
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CAA 90 bp TGGACGCAGTTCAAGCACTGGTCTGCATTGGGGCCATCACAGCCTTaGTCACCACACTCCGGATGGCACACACTGGTCTGTAAAATATTA +
Preference number: 6 (lower is better)
Translates to: WTQFKHWSALGPSQP*SPHSGWHTLVCKIL
Trigger: TAATATTTTACAGACCAGTGTGTGCCATCCGGAGTGTGGTGACAAAGGCTGTGATGGCCCCAATGCAGACCAGTGCTTGAACTGCGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000622483.4
ENST00000677364.1
CDS CAA 90 bp AGGATCCAACCCCAGGCCTGTCTGATGTCTCTCTTCTGTGGTCAGTaGATTTGCAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTT +
Preference number: 6 (lower is better)
Translates to: RIQPQACLMSLFCGQ*ICNRSLKITLLLRV
Trigger: AACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGACATCAGACAGGCCTGGGGTTGGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS TCA 72 bp CTCAAGCAGTTCTCGTCACACAGACAATGCCACTGGTaGGACGAGAACCAGGGCCGAGCTGAGTCATTTAAA +
Preference number: 6 (lower is better)
Translates to: LKQFSSHRQCHW*DENQGRAESFK
Trigger: TTTAAATGACTCAGCTCGGCCCTGGTTCTCGTCTCACCAGTGGCATTGTCTGTGTGACGAGAACTGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559430.1
CDS TCA 72 bp CGCATGGTTTCCCAAGGGCATCGTGAGGTTCGTATTTaGCTTTTGGAACTGTCGGCTCTGGCAAAACCCTCT +
Preference number: 6 (lower is better)
Translates to: RMVSQGHREVRI*LLELSALAKPS
Trigger: AGAGGGTTTTGCCAGAGCCGACAGTTCCAAAAGTCAAATACGAACCTCACGATGCCCTTGGGAAACCATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp TGCTGGCATCATATCGTGGAGATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGGCGTAGGAATCCAGGT +
Preference number: 6 (lower is better)
Translates to: CWHHIVEMGHNH*RSRRSWRRNPG
Trigger: ACCTGGATTCCTACGCCAGCTACGACGTGAACGGCAATGATTATGACCCATCTCCACGATATGATGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS GCA 72 bp AGTGTGTGCTGCATGAACAGGAGAACACCATGCAGATaGCCCTTAGTGCTGACAAAGCCAAGCTCGATTCCT +
Preference number: 6 (lower is better)
Translates to: SVCCMNRRTPCR*PLVLTKPSSIP
Trigger: AGGAATCGAGCTTGGCTTTGTCAGCACTAAGGGGCATCTGCATGGTGTTCTCCTGTTCATGCAGCACACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp AAGGTAAGTGTGTGCTGCATGAACAGGAGAACACCATaGAGATGCCCCTTAGTGCTGACAAAGCCAAGCTCG +
Preference number: 6 (lower is better)
Translates to: KVSVCCMNRRTP*RCPLVLTKPSS
Trigger: CGAGCTTGGCTTTGTCAGCACTAAGGGGCATCTGCATGGTGTTCTCCTGTTCATGCAGCACACACTTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp GGTTCCTACGTACACAGGTGGAGAGGCTGGAGGCCTTaGATAGAACCTGGGAATCCTTTCTTTTCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: GSYVHRWRGWRP*IEPGNPFFSKL
Trigger: CAGCTTTGAAAAGAAAGGATTCCCAGGTTCTATGCAAGGCCTCCAGCCTCTCCACCTGTGTACGTAGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp GAGATGGGTCATAATCATTGCCGTTCACGTCGTAGCTaGCGTAGGAATCATAATTTGGGGCCAGGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: EMGHNHCRSRRS*RRNHNLGPGQG
Trigger: ACCCTGACCTGGCCCCAAATTATGATTCCTACGCCAGCTACGACGTGAACGGCAATGATTATGACCCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
ENST00000678918.1
CDS CCA 72 bp TCAGGAACTTCCACCTCTTTGCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCAGGTAGATCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: SGTSTSLPEVET*FPREKPGRSGG
Trigger: ACCTCCAGATCTACCTGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGGTGGAAGTTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559605.1
CDS CAA 72 bp CATTGTACGCTATGCCCACGATGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTCCCGCACAACGAGTGC +
Preference number: 6 (lower is better)
Translates to: HCTLCPRCSRNC*LKQQLLPHNEC
Trigger: GCACTCGTTGTGCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCATCGTGGGCATAGCGTACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS CAA 72 bp GGATGGGGAGTGAGCTCAAGAGTAAAGACTAGTGAGTaGCTGGCCACCTTCATTTGGTGGGGACTTGAGGAA +
Preference number: 6 (lower is better)
Translates to: GWGVSSRVKTSE*LATFIWWGLEE
Trigger: TTCCTCAAGTCCCCACCAAATGAAGGTGGCCAGCAACTCACTAGTCTTTACTCTTGAGCTCACTCCCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 90 bp GAATCGAGAGTGTGGAAACGAACCTCTCTTCTGTGGTCAGTTGATTaGCAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTGCGGA +
Preference number: 6 (lower is better)
Translates to: ESRVWKRTSLLWSVD*QQESQDHLASPGCG
Trigger: TCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGTTCGTTTCCACACTCTCGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331826.12
ENST00000559417.2
CDS CAA 90 bp ACACGTGTTTTAGTCCAGGTTCCCTCTCTTCTGTGGTCAGTTGATTaGCAACAGGAGTCTCAAGATCACCTTGCTTCTCCGGGTTGCGGA +
Preference number: 6 (lower is better)
Translates to: TRVLVQVPSLLWSVD*QQESQDHLASPGCG
Trigger: TCCGCAACCCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGGAACCTGGACTAAAACACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS CAA 90 bp TTTGTCACCACACTCCGGATGGCACACACCTTAAAGAAACAAGCATaGCCTTTCATCCAGAGAGACGCCTTCTCCATCTACTGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: FVTTLRMAHTLKKQA*PFIQRDAFSIYCSP
Trigger: GGGACTGCAGTAGATGGAGAAGGCGTCTCTCTGGATGAAAGGCAATGCTTGTTTCTTTAAGGTGTGTGCCATCCGGAGTGTGGTGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp TGCTTAGCAGCATTCCTGGCCTCCACCCACTGGATGTaGGTACATCCTTCCAGTTGTGACAACCCAAAATGT +
Preference number: 6 (lower is better)
Translates to: CLAAFLASTHWM*VHPSSCDNPKC
Trigger: ACATTTTGGGTTGTCACAACTGGAAGGATGTACTCACATCCAGTGGGTGGAGGCCAGGAATGCTGCTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558864.5
ENST00000558951.5
ENST00000677962.1
CDS TCA 72 bp AGACCCTCTGGTTTCTCTTACAGACAATGCCACTGGTaGGACGAGAACCAGGGCCGAGCTGAGTCATTTAAA +
Preference number: 6 (lower is better)
Translates to: RPSGFSYRQCHW*DENQGRAESFK
Trigger: TTTAAATGACTCAGCTCGGCCCTGGTTCTCGTCTCACCAGTGGCATTGTCTGTAAGAGAAACCAGAGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS GCA 72 bp GCCTGTCTGATGTCTCTCTTCTGTGGTCAGTTGATTTaGAACAGGAGTCTCAAGATCACCTTGCTTCTCCGG +
Preference number: 6 (lower is better)
Translates to: ACLMSLFCGQLI*NRSLKITLLLR
Trigger: CCGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGACATCAGACAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS GCA 72 bp ACGTCTGAACTTCAGCAAGCCCCTCAGGCTAAGGACTaGATTCCTTGGCAAGGGTTTATTTCACCACCTCTT +
Preference number: 6 (lower is better)
Translates to: TSELQQAPQAKD*IPWQGFISPPL
Trigger: AAGAGGTGGTGAAATAAACCCTTGCCAAGGAATGCAGTCCTTAGCCTGAGGGGCTTGCTGAAGTTCAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678381.1
CDS CCA 72 bp AAAGATCCAGCAACCTCTTTGCCAGAAGTTGAGACTTaGTTCCCGAGGGAGAAACCAGGTAGATCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: KDPATSLPEVET*FPREKPGRSGG
Trigger: ACCTCCAGATCTACCTGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CCA 72 bp GAGATGGGTCATAATCATTGCCGTTCACGTCGTAGCTaGCGTAGGAATCCAGGTACCACATGTTGGACCAAA +
Preference number: 6 (lower is better)
Translates to: EMGHNHCRSRRS*RRNPGTTCWTK
Trigger: TTTGGTCCAACATGTGGTACCTGGATTCCTACGCCAGCTACGACGTGAACGGCAATGATTATGACCCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559417.2
CDS CAA 72 bp GTGTGTCTGAGGATGCTGAGCCTAGAGCTCAAGCCCTaGGTCTGTAATTGTAAATGTGTAAACCCCACAGGC +
Preference number: 6 (lower is better)
Translates to: VCLRMLSLELKP*VCNCKCVNPTG
Trigger: GCCTGTGGGGTTTACACATTTACAATTACAGACCAAGGGCTTGAGCTCTAGGCTCAGCATCCTCAGACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS CAA 72 bp GGCCTGTCTGATGTCTCTCTTCTGTGGTCAGTTGATTaGCAACAGGAGTCTCAAGATCACCTTGCTTCTCCG +
Preference number: 6 (lower is better)
Translates to: GLSDVSLLWSVD*QQESQDHLASP
Trigger: CGGAGAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGACATCAGACAGGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CAA 72 bp CCCCAGGCCTGTCTGATGTCTCTCTTCTGTGGTCAGTaGATTTGCAACAGGAGTCTCAAGATCACCTTGCTT +
Preference number: 6 (lower is better)
Translates to: PQACLMSLFCGQ*ICNRSLKITLL
Trigger: AAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGACATCAGACAGGCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676494.1
CDS CAA 72 bp AGGTTCCTACGTACACAGGTGGAGAGGCTGGAGGCCTaGCATAGAACCTGGGAATCCTTTCTTTTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: RFLRTQVERLEA*HRTWESFLFKA
Trigger: AGCTTTGAAAAGAAAGGATTCCCAGGTTCTATGCAAGGCCTCCAGCCTCTCCACCTGTGTACGTAGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS TCA 72 bp CTCCACCCACTGGATGTGAGTACATCCTTCCAGTTGTaGCAACCCAAAATGTCTCCAGACGTTGCCAAATGT +
Preference number: 6 (lower is better)
Translates to: LHPLDVSTSFQL*QPKMSPDVAKC
Trigger: ACATTTGGCAACGTCTGGAGACATTTTGGGTTGTCACAACTGGAAGGATGTACTCACATCCAGTGGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000558864.5
ENST00000558951.5
ENST00000677962.1
CDS TCA 72 bp ATTGGATTCTTTGCCCACCTCATCCTGGGTCATCTATaGGGACAGCCTCCAAAATCCTCATTTCTCGCACCA +
Preference number: 6 (lower is better)
Translates to: IGFFAHLILGHL*GQPPKSSFLAP
Trigger: TGGTGCGAGAAATGAGGATTTTGGAGGCTGTCCTCATAGATGACCCAGGATGAGGTGGGCAAAGAATCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp AATTTAGGAGTGTGGGTCAGGAAACACGTCCCGCTTTaGTACAGAGTAGAAGTGCTGAGAAGGTCTAGGAGT +
Preference number: 6 (lower is better)
Translates to: NLGVWVRKHVPL*YRVEVLRRSRS
Trigger: ACTCCTAGACCTTCTCAGCACTTCTACTCTGTACCAAAGCGGGACGTGTTTCCTGACCCACACTCCTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679007.1
CDS CAA 72 bp AGGCTCCATTCTTTCAACTTCCCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGGAGAAACCAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: RLHSFNFPLCQK*RLGSRGRNQVD
Trigger: ATCTACCTGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGGGAAGTTGAAAGAATGGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560902.5
CDS CAA 72 bp ACACTCCGGATGGCACACACCTTAAAGAAACAAGCATaGCCTTTCATCCAGAGAGACGCCTTCTCCATCTAC +
Preference number: 6 (lower is better)
Translates to: TLRMAHTLKKQA*PFIQRDAFSIY
Trigger: GTAGATGGAGAAGGCGTCTCTCTGGATGAAAGGCAATGCTTGTTTCTTTAAGGTGTGTGCCATCCGGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CAA 90 bp CTATTTTGGCATTGTACGCTATGCCCACGATGCAGTAGGAATTGTTaGCTGAAGCAGCAACTTCTCCCGCACAACGAGTGCCGTGTTTAT +
Preference number: 6 (lower is better)
Translates to: LFWHCTLCPRCSRNC*LKQQLLPHNECRVY
Trigger: ATAAACACGGCACTCGTTGTGCGGGAGAAGTTGCTGCTTCAGCAAACAATTCCTACTGCATCGTGGGCATAGCGTACAATGCCAAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS TCA 72 bp GAGAGTGTGGAAACGAACCTCTCTTCTGTGGTCAGTTaGTTTGCAACAGGAGTCTCAAGATCACCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: ESVETNLSSVVS*FATGVSRSPCF
Trigger: GAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGTTCGTTTCCACACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331826.12
ENST00000559417.2
CDS GCA 72 bp TGCTGGCATCATATCGTGGAGATGGGTCATAATCATTaGCGTTCACGTCGTAGCTGGCGTAGGAATCATAAT +
Preference number: 6 (lower is better)
Translates to: CWHHIVEMGHNH*RSRRSWRRNHN
Trigger: ATTATGATTCCTACGCCAGCTACGACGTGAACGGCAATGATTATGACCCATCTCCACGATATGATGCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
ENST00000678918.1
CDS CCA 72 bp CTCCCGCACAACGAGTGCCGTGTTTATTTTCATTGCTaGCATCATATCGTGGAGATGGGTCATAATCATTGC +
Preference number: 6 (lower is better)
Translates to: LPHNECRVYFHC*HHIVEMGHNHC
Trigger: GCAATGATTATGACCCATCTCCACGATATGATGCCAGCAATGAAAATAAACACGGCACTCGTTGTGCGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS CCA 72 bp GGAACACGTGTTTTAGTCCAGGTTCCCTCTCTTCTGTaGTCAGTTGATTTGCAACAGGAGTCTCAAGATCAC +
Preference number: 6 (lower is better)
Translates to: GTRVLVQVPSLL*SVDLQQESQDH
Trigger: GTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGGAACCTGGACTAAAACACGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS CCA 72 bp CTTCAGCAAGCCCCTCAGGCTAAGGACTGCATTCCTTaGCAAGGGTTTATTTCACCACCTCTTTGTAAACAA +
Preference number: 6 (lower is better)
Translates to: LQQAPQAKDCIP*QGFISPPLCKQ
Trigger: TTGTTTACAAAGAGGTGGTGAAATAAACCCTTGCCAAGGAATGCAGTCCTTAGCCTGAGGGGCTTGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678381.1
CDS CAA 72 bp TTCATTGGAAAGATCCAGCAACCTCTTTGCCAGAAGTaGAGACTTGGTTCCCGAGGGAGAAACCAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: FIGKIQQPLCQK*RLGSRGRNQVD
Trigger: ATCTACCTGGTTTCTCCCTCGGGAACCAAGTCTCAACTTCTGGCAAAGAGGTTGCTGGATCTTTCCAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000558154.2
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000676494.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000679007.1
CDS CAA 90 bp TTATTCCTAGTGTGTCTGAGGATGCTGAGCCTAGAGCTCAAGCCCTaGGTCTGTAATTGTAAATGTGTAAACCCCACAGGCAAACTCACA +
Preference number: 6 (lower is better)
Translates to: LFLVCLRMLSLELKP*VCNCKCVNPTGKLT
Trigger: TGTGAGTTTGCCTGTGGGGTTTACACATTTACAATTACAGACCAAGGGCTTGAGCTCTAGGCTCAGCATCCTCAGACACACTAGGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559499.1
CDS TCA 72 bp TGTTTTAGTCCAGGTTCCCTCTCTTCTGTGGTCAGTTaGTTTGCAACAGGAGTCTCAAGATCACCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: CFSPGSLSSVVS*FATGVSRSPCF
Trigger: GAAGCAAGGTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGGAACCTGGACTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS TCA 72 bp CCTTTGTTTCCTCTGAGGAAACGAAGGCTTCAGGAGTaGATGTCAAACATGATGCCCTTTGTCTTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: PLFPLRKRRLQE*MSNMMPFVLVS
Trigger: ACTCACCAAGACAAAGGGCATCATGTTTGACATTCACTCCTGAAGCCTTCGTTTCCTCAGAGGAAACAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS GCA 72 bp GTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTaGCACCGGAACACGTGTTTTAGTCCAGGTTCCCTC +
Preference number: 6 (lower is better)
Translates to: VFHRDYQSSCSI*HRNTCFSPGSL
Trigger: GAGGGAACCTGGACTAAAACACGTGTTCCGGTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611967.4
CDS CCA 72 bp GTGTTTATTTTCATTGCTGGCATCATATCGTGGAGATaGGTCATAATCATTGCCGTTCACGTCGTAGCTGGC +
Preference number: 6 (lower is better)
Translates to: VFIFIAGIISWR*VIIIAVHVVAG
Trigger: GCCAGCTACGACGTGAACGGCAATGATTATGACCCATCTCCACGATATGATGCCAGCAATGAAAATAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS CCA 72 bp ACAGAATCGAGAGTGTGGAAACGAACCTCTCTTCTGTaGTCAGTTGATTTGCAACAGGAGTCTCAAGATCAC +
Preference number: 6 (lower is better)
Translates to: TESRVWKRTSLL*SVDLQQESQDH
Trigger: GTGATCTTGAGACTCCTGTTGCAAATCAACTGACCACAGAAGAGAGGTTCGTTTCCACACTCTCGATTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331826.12
ENST00000559417.2
CDS GCA 72 bp CTGGCCCTTTCATTTTTCTCATGGACGAAGAATAACTaGCTCTTGATTGCGCTTCTCTGTCTTGCAATCTGT +
Preference number: 6 (lower is better)
Translates to: LALSFFSWTKNN*LLIALLCLAIC
Trigger: ACAGATTGCAAGACAGAGAAGCGCAATCAAGAGGCAGTTATTCTTCGTCCATGAGAAAAATGAAAGGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557794.5
CDS GCA 72 bp CTTCCAGTTGTGACAACCCAAAATGTCTCCAGACGTTaGCAAATGTCCCTGGTCTGTAAAATATTAGCAGAG +
Preference number: 6 (lower is better)
Translates to: LPVVTTQNVSRR*QMSLVCKILAE
Trigger: CTCTGCTAATATTTTACAGACCAGGGACATTTGGCAACGTCTGGAGACATTTTGGGTTGTCACAACTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558951.5
CDS GCA 72 bp GTATTTCACAGAGATTACCAAAGCTCTTGTTCAATCTaGCACCGGAACACGTGTTTTAGTCCAGGTTCCCTT +
Preference number: 6 (lower is better)
Translates to: VFHRDYQSSCSI*HRNTCFSPGSL
Trigger: AAGGGAACCTGGACTAAAACACGTGTTCCGGTGGCAGATTGAACAAGAGCTTTGGTAATCTCTGTGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615296.4
CDS GCA 72 bp AATATTTTGGATCAATTCCCATCTGATTGGATTCTTTaGCCACCTCATCCTGGGTCATCTATGAGGACAGCC +
Preference number: 6 (lower is better)
Translates to: NILDQFPSDWIL*PPHPGSSMRTA
Trigger: GGCTGTCCTCATAGATGACCCAGGATGAGGTGGGCAAAGAATCCAATCAGATGGGAATTGATCCAAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1
CDS CCA 72 bp AGTGCCGTGTTTATTTTCATTGCTGGCATCATATCGTaGAGATGGGTCATAATCATTGCCGTTCACGTCGTA +
Preference number: 6 (lower is better)
Translates to: SAVFIFIAGIIS*RWVIIIAVHVV
Trigger: TACGACGTGAACGGCAATGATTATGACCCATCTCCACGATATGATGCCAGCAATGAAAATAAACACGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000331826.12
ENST00000398185.6
ENST00000559417.2
ENST00000611716.5
ENST00000611967.4
ENST00000615296.4
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000677528.1
CDS CCA 72 bp AAACAGACCAAACTGCTGTCTTCACACAGCAGGTCATaGAGACGGTTAGACTTAAGGGTTTCTCTTTTAAAA +
Preference number: 6 (lower is better)
Translates to: KQTKLLSSHSRS*RRLDLRVSLLK
Trigger: TTTTAAAAGAGAAACCCTTAAGTCTAACCGTCTCCATGACCTGCTGTGTGAAGACAGCAGTTTGGTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678918.1
CDS CAA 72 bp CTTTCATTTTTCTCATGGACGAAGAATAACTGCCTCTaGATTGCGCTTCTCTGTCTTGCAATCTGTGCTGTT +
Preference number: 6 (lower is better)
Translates to: LSFFSWTKNNCL*IALLCLAICAV
Trigger: AACAGCACAGATTGCAAGACAGAGAAGCGCAATCAAGAGGCAGTTATTCTTCGTCCATGAGAAAAATGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557794.5
CDS TCA 72 bp TTTCATTTTTCTCATGGACGAAGAATAACTGCCTCTTaGTTGCGCTTCTCTGTCTTGCAATCTGTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: FHFSHGRRITAS*LRFSVLQSVLF
Trigger: AAACAGCACAGATTGCAAGACAGAGAAGCGCAATCAAGAGGCAGTTATTCTTCGTCCATGAGAAAAATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557794.5
CDS GCA 72 bp AGGTTCCTTTACATTAAAAGGGCTTGTCAGCATCTATaGTCCCTGAATCTAAGACCAGACAAGAGAAACAAA +
Preference number: 6 (lower is better)
Translates to: RFLYIKRACQHL*SLNLRPDKRNK
Trigger: TTTGTTTCTCTTGTCTGGTCTTAGATTCAGGGAGCATAGATGCTGACAAGCCCTTTTAATGTAAAGGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679007.1
CDS CCA 72 bp ACATTTCTCAGGTTCATCCACGCACTTTTTACAGCTTaGGTGGCATTTAAGGCAATTTTTCTGACTTTCATC +
Preference number: 6 (lower is better)
Translates to: TFLRFIHALFTA*VAFKAIFLTFI
Trigger: GATGAAAGTCAGAAAAATTGCCTTAAATGCCACCCAAGCTGTAAAAAGTGCGTGGATGAACCTGAGAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000398185.6
ENST00000611716.5
ENST00000618548.4
ENST00000619160.4
ENST00000622483.4
ENST00000632686.1
ENST00000676598.1
ENST00000677364.1
ENST00000677528.1
ENST00000677962.1
ENST00000679007.1
CDS CCA 72 bp GTTTACTATAATATTTTGGATCAATTCCCATCTGATTaGATTCTTTGCCCACCTCATCCTGGGTCATCTATG +
Preference number: 6 (lower is better)
Translates to: VYYNILDQFPSD*ILCPPHPGSSM
Trigger: CATAGATGACCCAGGATGAGGTGGGCAAAGAATCCAATCAGATGGGAATTGATCCAAAATATTATAGTAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677962.1