RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCSK5 (Homo sapiens)

Ensembl gene IDs: ENSG00000099139

Ensembl transcript IDs: ENST00000376752.8, ENST00000376767.7, ENST00000424854.6, ENST00000455778.1, ENST00000545128.5, ENST00000673745.1, ENST00000674117.1

Found 1191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTATGATGCACCTTCTCTTTTCTTCCCTTATCTCAAGTAGGTCCTaGGCAGCCCAGCCCAGGTGGTCTCTTCTGCTCACCAGGGGTGGC +
Preference number: 1 (lower is better)
Translates to: AMMHLLFSSLISSRS*AAQPRWSLLLTRGG
Trigger: GCCACCCCTGGTGAGCAGAAGAGACCACCTGGGCTGGGCTGCTCAGGACCTACTTGAGATAAGGGAAGAAAAGAGAAGGTGCATCATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR GCA 90 bp TTATCTCAAGTAGGTCCTGAGCAGCCCAGCCCAGGTGGTCTCTTCTaGTCACCAGGGGTGGCCTGGAGTCAATTGATAAGAGCCCTCTTT +
Preference number: 1 (lower is better)
Translates to: LSQVGPEQPSPGGLF*SPGVAWSQLIRALF
Trigger: AAAGAGGGCTCTTATCAATTGACTCCAGGCCACCCCTGGTGAGCAGAAGAGACCACCTGGGCTGGGCTGCTCAGGACCTACTTGAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR TCA 90 bp TGCGGAGGAACTAGGGCCTGGGGTGACCTCATGGCTCCTCAGCTATaGTGCACCTTCTCTTTTCTTCCCTTATCTCAAGTAGGTCCTGAG +
Preference number: 1 (lower is better)
Translates to: CGGTRAWGDLMAPQL*CTFSFLPLSQVGPE
Trigger: CTCAGGACCTACTTGAGATAAGGGAAGAAAAGAGAAGGTGCATCATAGCTGAGGAGCCATGAGGTCACCCCAGGCCCTAGTTCCTCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR TCA 90 bp AGTTATTTCTTTCTCGCTGGGCTTGCTCTGCCTTTAGAATTGTTGTaGCTCTGGATTCCTGCGGAGGAACTAGGGCCTGGGGTGACCTCA +
Preference number: 1 (lower is better)
Translates to: SYFFLAGLALPLELL*LWIPAEELGPGVTS
Trigger: TGAGGTCACCCCAGGCCCTAGTTCCTCCGCAGGAATCCAGAGTCACAACAATTCTAAAGGCAGAGCAAGCCCAGCGAGAAAGAAATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR GCA 90 bp CAGTATTTCCGCGACGTGCACCTGCATGGTCAGTGGGAAATGGAATaGACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGT +
Preference number: 1 (lower is better)
Translates to: QYFRDVHLHGQWEME*TLVDPNEFCCHVDG
Trigger: ACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTGCACGTCGCGGAAATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR GCA 90 bp AGAGTGCAGTTCCTGGAAATTCAGTTATTTCTTTCTCGCTGGGCTTaGTCTGCCTTTAGAATTGTTGTGACTCTGGATTCCTGCGGAGGA +
Preference number: 1 (lower is better)
Translates to: RVQFLEIQLFLSRWA*SAFRIVVTLDSCGG
Trigger: TCCTCCGCAGGAATCCAGAGTCACAACAATTCTAAAGGCAGAGCAAGCCCAGCGAGAAAGAAATAACTGAATTTCCAGGAACTGCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATaGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTG +
Preference number: 1 (lower is better)
Translates to: QHLLSKALRSMKPAR*LVTCKANEVTNEAL
Trigger: CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
3UTR CCA 90 bp GTCCATCTGTCCATCACCAATTTGACTATACAGAGCAATCCCATTTaGCGAACTGCGTGTAAAATAACCCAATCTACAATGGAAAAGCCA +
Preference number: 1 (lower is better)
Translates to: VHLSITNLTIQSNPI*RTACKITQSTMEKP
Trigger: TGGCTTTTCCATTGTAGATTGGGTTATTTTACACGCAGTTCGCCAAATGGGATTGCTCTGTATAGTCAAATTGGTGATGGACAGATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR CCA 90 bp ATGACAGAGACTTTCTGGCCAAGAAAGCCTAATGTACTTACTAGCTaGCTCTTTCCAGAGACTGTTTGTCAACCCTGTTTTAAGAGCTTT +
Preference number: 1 (lower is better)
Translates to: MTETFWPRKPNVLTS*LFPETVCQPCFKSF
Trigger: AAAGCTCTTAAAACAGGGTTGACAAACAGTCTCTGGAAAGAGCCAGCTAGTAAGTACATTAGGCTTTCTTGGCCAGAAAGTCTCTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR GCA 90 bp TCGTGCCTCAAATATTATGGGCTGATTCAGTTAAATAGATTTCTTTaGAGGCAAATTCGGTTTTGCCATCTGCTTGACCTTGCTTTAGGC +
Preference number: 1 (lower is better)
Translates to: SCLKYYGLIQLNRFL*RQIRFCHLLDLALG
Trigger: GCCTAAAGCAAGGTCAAGCAGATGGCAAAACCGAATTTGCCTGCAAAGAAATCTATTTAACTGAATCAGCCCATAATATTTGAGGCACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR CCA 90 bp CCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTaGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTTG +
Preference number: 1 (lower is better)
Translates to: PTSFCIARALLCVTI*TKTVLSCMNPRIHL
Trigger: CAAGTGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR TCA 90 bp ACTAAAAACAAAGAAGGAAAGATGTCAAACCTCAATACACAAGCATaGGCCTTCTTTTCATTGCAGGCCACACAGAGGAACACCACAATT +
Preference number: 1 (lower is better)
Translates to: TKNKEGKMSNLNTQA*AFFSLQATQRNTTI
Trigger: AATTGTGGTGTTCCTCTGTGTGGCCTGCAATGAAAAGAAGGCTCATGCTTGTGTATTGAGGTTTGACATCTTTCCTTCTTTGTTTTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR GCA 90 bp GAAAGATGTCAAACCTCAATACACAAGCATGAGCCTTCTTTTCATTaGAGGCCACACAGAGGAACACCACAATTTTTCTTAGTATTGAAG +
Preference number: 1 (lower is better)
Translates to: ERCQTSIHKHEPSFH*RPHRGTPQFFLVLK
Trigger: CTTCAATACTAAGAAAAATTGTGGTGTTCCTCTGTGTGGCCTGCAATGAAAAGAAGGCTCATGCTTGTGTATTGAGGTTTGACATCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 90 bp TCAAATTTTGGCATCAAATGCTTTGGTCATACAATACTGTCTCTGTaGTTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGG +
Preference number: 1 (lower is better)
Translates to: SNFGIKCFGHTILSL*FWLFSTKHPVIKGR
Trigger: CCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAACCACAGAGACAGTATTGTATGACCAAAGCATTTGATGCCAAAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR GCA 90 bp GCAGGAAATCAAATCATTACTTTAACGTCAAATTTTGGCATCAAATaGTTTGGTCATACAATACTGTCTCTGTGGTTCTGGCTGTTTAGC +
Preference number: 1 (lower is better)
Translates to: AGNQIITLTSNFGIK*FGHTILSLWFWLFS
Trigger: GCTAAACAGCCAGAACCACAGAGACAGTATTGTATGACCAAAGCATTTGATGCCAAAATTTGACGTTAAAGTAATGATTTGATTTCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR GCA 90 bp CAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCATCAGTTCACCATCTCCCTaGACAAACTTGAGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: QGSWISLSSSMYLCILSISSPSP*TNLRER
Trigger: TCTCTCTCTCAAGTTTGTGCAGGGAGATGGTGAACT...GATGGACAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCTCACAGGCATGCCTaGGAGTGGAATGGTGGTGTT +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAHRHA*EWNGGV
Trigger: AACACCACCATTCCACTCTCAGGCATGCCTGTGAGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCAGGTGGTCTCTTCTaGTCACCAGGGGTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPGGLF*SPGVAW
Trigger: CCAGGCCACCCCTGGTGAGCAGAAGAGACCACCTGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTTGTCATTTCCCCCAATaGTGGACTCAAGCATGCAAG +
Preference number: 2 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLCHFPQ*WTQACK
Trigger: CTTGCATGCTTGAGTCCACCATTGGGGGAAATGACA...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGCAGCCCAGCCCAGGTaGTCTCTTCTGCTCACCAGG +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTAAQPR*SLLLTR
Trigger: CCTGGTGAGCAGAAGAGACCACCTGGGCTGGGCTGC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCAGTGCTGGAAGGCTaGTCAGCAGCTAGAGTACAG +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAVLEG*SAARVQ
Trigger: CTGTACTCTAGCTGCTGACCAGCCTTCCAGCACTGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACATAGTGATGAGCAGTaGTGGAAGGCTGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTHSDEQ*WKAGQQ
Trigger: CTGCTGACCAGCCTTCCAGCACTGCTCATCACTATG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATTTCCCCCAATGGTaGACTCAAGCATGCAAGAGC +
Preference number: 2 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCHFPQW*TQACKS
Trigger: GCTCTTGCATGCTTGAGTCCACCATTGGGGGAAATG...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTGAATTTCAGGGGAGCTaGATCAGCCTCAGCTCATCT +
Preference number: 2 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCEFQGS*ISLSSS
Trigger: AGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCATGAAGCCTGCAAGATaGCTGGTCACTTGTAAAGCA +
Preference number: 2 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSMKPAR*LVTCKA
Trigger: TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCAT...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCACCAGGGGTGGCCTaGAGTCAATTGATAAGAGCC +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSPGVA*SQLIRA
Trigger: GGCTCTTATCAATTGACTCCAGGCCACCCCTGGTGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGAGGAACTAGGGCCTaGGGTGACCTCATGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGGTRA*GDLMAP
Trigger: AGGAGCCATGAGGTCACCCCAGGCCCTAGTTCCTCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGAGGAACTAGGGCCTaGGGTGACCTCATGGCTCCT +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTGGTRA*GDLMAP
Trigger: AGGAGCCATGAGGTCACCCCAGGCCCTAGTTCCTCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAGTGATGAGCAGTGCTaGAAGGCTGGTCAGCAGCTA +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSDEQC*KAGQQL
Trigger: TAGCTGCTGACCAGCCTTCCAGCACTGCTCATCACT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTGACTCTGGATTCCTaGGGAGGAACTAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVTLDS*GGTRAW
Trigger: CCAGGCCCTAGTTCCTCCGCAGGAATCCAGAGTCAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCTCACAGGCATGCCTaGGAGTGGAATGGTGGTGTT +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTAHRHA*EWNGGV
Trigger: AACACCACCATTCCACTCTCAGGCATGCCTGTGAGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAATTCGATGTCTTAGCTaGTGTCTCCCAGGCGAAAAG +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTIRCLS*CLPGEK
Trigger: CTTTTCGCCTGGGAGACATCAGCTAAGACATCGAAT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGAGTCCACGGTTTTGTaGTGGGTTGTTGATGAAGGA +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTESTVL*WVVDEG
Trigger: TCCTTCATCAACAACCCATCACAAAACCGTGGACTC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCTGGGGTGACCTCATaGCTCCTCAGCTATGATGCA +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPGVTS*LLSYDA
Trigger: TGCATCATAGCTGAGGAGCCATGAGGTCACCCCAGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCAGTGCTGGAAGGCTaGTCAGCAGCTAGAGTACAG +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTAVLEG*SAARVQ
Trigger: CTGTACTCTAGCTGCTGACCAGCCTTCCAGCACTGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTTTCTCGCTGGGCTTaGTCTGCCTTTAGAATTGTT +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLSRWA*SAFRIV
Trigger: AACAATTCTAAAGGCAGAGCAAGCCCAGCGAGAAAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACATAGTGATGAGCAGTaGTGGAAGGCTGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHSDEQ*WKAGQQ
Trigger: CTGCTGACCAGCCTTCCAGCACTGCTCATCACTATG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAACTCACACATCAGCCTaGTGTGGGGATAAAACCAAA +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTTHTSA*CGDKTK
Trigger: TTTGGTTTTATCCCCACACCAGGCTGATGTGTGAGT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAGTGATGAGCAGTGCTaGAAGGCTGGTCAGCAGCTA +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSDEQC*KAGQQL
Trigger: TAGCTGCTGACCAGCCTTCCAGCACTGCTCATCACT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTAGGCAAATTCGGTTTTaGCATCTGCTTGACCTTGCT +
Preference number: 2 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSRQIRF*HLLDLA
Trigger: AGCAAGGTCAAGCAGATGGCAAAACCGAATTTGCCT...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR TCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTATCCATGTTTCACTGTaGAATACCATGGCAAACGAC +
Preference number: 2 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSIHVSL*NTMAND
Trigger: GTCGTTTGCCATGGTATTTCACAGTGAAACATGGAT...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCTTTAGAATTGTTGTaGCTCTGGATTCCTGCGGAG +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTPLELL*LWIPAE
Trigger: CTCCGCAGGAATCCAGAGTCACAACAATTCTAAAGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATTCGATGTCTTAGCTaGTGTCTCCCAGGCGAAAAG +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTIRCLS*CLPGEK
Trigger: CTTTTCGCCTGGGAGACATCAGCTAAGACATCGAAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTAGCACCAAGAGATTGTaGAGGGTCTACAAAGTTAAC +
Preference number: 2 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSSTKRL*RVYKVN
Trigger: GTTAACTTTGTAGACCCTGCACAATCTCTTGGTGCT...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATGGCTCCTCAGCTATaGTGCACCTTCTCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTMAPQL*CTFSFL
Trigger: AAGAAAAGAGAAGGTGCATCATAGCTGAGGAGCCAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAATGGCTCCTCAGCTATaGTGCACCTTCTCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTMAPQL*CTFSFL
Trigger: AAGAAAAGAGAAGGTGCATCATAGCTGAGGAGCCAT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTACCCAGAAAATCATaGGAGTGCAGTTCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTVPRKS*ECSSWK
Trigger: TTTCCAGGAACTGCACTCTCATGATTTTCTGGGTAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTACCCAGAAAATCATaGGAGTGCAGTTCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVPRKS*ECSSWK
Trigger: TTTCCAGGAACTGCACTCTCATGATTTTCTGGGTAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTTTCTCGCTGGGCTTaGTCTGCCTTTAGAATTGTT +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTLSRWA*SAFRIV
Trigger: AACAATTCTAAAGGCAGAGCAAGCCCAGCGAGAAAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTaGATGAATCCAAGAATACAC +
Preference number: 2 (lower is better)
Translates to: LPTSFCIARALLCVTIWTKTVLS*MNPRIH
Trigger: GTGTATTCTTGGATTCATGCAACTGAGGACAGTTTT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTGCCAACATCATTTTaGATAGCAAGAGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTLPTSF*IARALL
Trigger: GAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTAGAGTACAGCTTGTaGGCAGCATATTGGGATTTT +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLEYSL*AAYWDF
Trigger: AAAATCCCAATATGCTGCTCACAAGCTGTACTCTAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTAAAAGGGTACAATCATaGCACCCATATTCAATTTCC +
Preference number: 2 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSKRVQS*HPYSIS
Trigger: GGAAATTGAATATGGGTGGCATGATTGTACCCTTTT...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTTGGCATCAAATGCTTTaGTCATACAATACTGTCTCT +
Preference number: 2 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSWHQML*SYNTVS
Trigger: AGAGACAGTATTGTATGACCAAAGCATTTGATGCCA...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CCA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATCACTGTGAAATACCATaGCAAACGACACTAAACACA +
Preference number: 2 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYHCEIP*QTTLNT
Trigger: TGTGTTTAGTGTCGTTTGCCATGGTATTTCACAGTG...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTATTTCTTTCTCGCTaGGCTTGCTCTGCCTTTAGA +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLFLSR*ACSAFR
Trigger: TCTAAAGGCAGAGCAAGCCCAGCGAGAAAGAAATAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTCTGTGTTACAATCTaGACAAAAACTGTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTLCVTI*TKTVLS
Trigger: ACTGAGGACAGTTTTTGTCCAGATTGTAACACAGAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR GCA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATATTTTTGTCTATGTATaGTCTCGCGATGTTTTGGAA +
Preference number: 2 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYIFVYV*SRDVLE
Trigger: TTCCAAAACATCGCGAGAGCATACATAGACAAAAAT...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAAAACTGTCCTCAGTTaGATGAATCCAAGAATACAC +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTKTVLS*MNPRIH
Trigger: GTGTATTCTTGGATTCATGCAACTGAGGACAGTTTT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTCTGGTTGGACTCATaGTTAAAGAAGACAAATAGA +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFWLDS*LKKTNR
Trigger: TCTATTTGTCTTCTTTAACCATGAGTCCAACCAGAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTCTGGTTGGACTCATaGTTAAAGAAGACAAATAGA +
Preference number: 2 (lower is better)
Translates to: SISSTACKVYFDKEICKTFWLDS*LKKTNR
Trigger: TCTATTTGTCTTCTTTAACCATGAGTCCAACCAGAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACATTCTTACATATTCTaGTTGGACTCATGGTTAAAG +
Preference number: 2 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHSYIF*LDSWLK
Trigger: CTTTAACCATGAGTCCAACCAGAATATGTAAGAATG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACATTCTTACATATTCTaGTTGGACTCATGGTTAAAG +
Preference number: 2 (lower is better)
Translates to: NASEFYPCSSITVEQELLHSYIF*LDSWLK
Trigger: CTTTAACCATGAGTCCAACCAGAATATGTAAGAATG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR TCA 72 bp GGCAAGACTCCTGTCTCAAGAGCCGAGCTCCCCGAGTaGGCAATTCCTGTCCCTTTTAAGGGCTCACAACTC +
Preference number: 3 (lower is better)
Translates to: GKTPVSRAELPE*AIPVPFKGSQL
Trigger: GAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTCACTCGGGGAGCTCGGCTCTTGAGACAGGAGTCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674117.1
3UTR TCA 72 bp TTTCTCGCTGGGCTTGCTCTGCCTTTAGAATTGTTGTaGCTCTGGATTCCTGCGGAGGAACTAGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: FLAGLALPLELL*LWIPAEELGPG
Trigger: CCCAGGCCCTAGTTCCTCCGCAGGAATCCAGAGTCACAACAATTCTAAAGGCAGAGCAAGCCCAGCGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR GCA 72 bp TGCTCTGCCTTTAGAATTGTTGTGACTCTGGATTCCTaGGGAGGAACTAGGGCCTGGGGTGACCTCATGGCT +
Preference number: 3 (lower is better)
Translates to: CSAFRIVVTLDS*GGTRAWGDLMA
Trigger: AGCCATGAGGTCACCCCAGGCCCTAGTTCCTCCGCAGGAATCCAGAGTCACAACAATTCTAAAGGCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 72 bp ATTCCTGCGGAGGAACTAGGGCCTGGGGTGACCTCATaGCTCCTCAGCTATGATGCACCTTCTCTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: IPAEELGPGVTS*LLSYDAPSLFF
Trigger: GAAGAAAAGAGAAGGTGCATCATAGCTGAGGAGCCATGAGGTCACCCCAGGCCCTAGTTCCTCCGCAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 72 bp GTCTCACTATGTTGTCCAAGGCTGATGTCGAACTCCTaGGCTCAAGAACAGGTGGTGGGTCAGCAATCCTCC +
Preference number: 3 (lower is better)
Translates to: VSLCCPRLMSNS*AQEQVVGQQSS
Trigger: GGAGGATTGCTGACCCACCACCTGTTCTTGAGCCCAGGAGTTCGACATCAGCCTTGGACAACATAGTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 72 bp GTAGTTAAACCAGTATTTCCGCGACGTGCACCTGCATaGTCAGTGGGAAATGGAATGCACGCTGGTAGACCC +
Preference number: 3 (lower is better)
Translates to: VVKPVFPRRAPA*SVGNGMHAGRP
Trigger: GGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTGCACGTCGCGGAAATACTGGTTTAACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR CCA 72 bp TTTCAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATaGGGACCTCAGCATCTACTTCCTAGCTCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: FQGRLFPSLLFG*GPQHLLPSSFP
Trigger: TGGGAAAGAGCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTGGCCTGGAGTCAATaGATAAGAGCCCTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVAWSQ*IRALFS
Trigger: AGAAAAGAGGGCTCTTATCAATTGACTCCAGGCCAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR GCA 72 bp AGGAAGTCTAGAAACAAAAATCATAGTGATGAGCAGTaGTGGAAGGCTGGTCAGCAGCTAGAGTACAGCTTG +
Preference number: 3 (lower is better)
Translates to: RKSRNKNHSDEQ*WKAGQQLEYSL
Trigger: CAAGCTGTACTCTAGCTGCTGACCAGCCTTCCAGCACTGCTCATCACTATGATTTTTGTTTCTAGACTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 72 bp ATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATaGTGGACTCAAGCATGCAAGAGCTTTCTATTTCAT +
Preference number: 3 (lower is better)
Translates to: MPSGPVFCHFPQ*WTQACKSFLFH
Trigger: ATGAAATAGAAAGCTCTTGCATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR CCA 72 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATaGCTGGTCACTTGTAAAGCAAATGAGGTCACCAAT +
Preference number: 3 (lower is better)
Translates to: LSKALRSMKPAR*LVTCKANEVTN
Trigger: ATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
3UTR-3UTR CAA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATGACCTTGCTTTAGGCTaGTGCTTGCATTTGTCCACG +
Preference number: 3 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYDLALG*CLHLST
Trigger: CGTGGACAAATGCAAGCACAAGCCTAAAGCAAGGTC...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR GCA 72 bp GACAAGGAAATCTGTAAGACCCTGCCAACATCATTTTaGATAGCAAGAGCCCTTCTCTGTGTTACAATCTGG +
Preference number: 3 (lower is better)
Translates to: DKEICKTLPTSF*IARALLCVTIW
Trigger: CCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAGGGTCTTACAGATTTCCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR GCA 72 bp ATTGAAGCACAGCTCACCCATCCGTTATGTACCAGCTaGATTCATGCTATAATAGCAGAGCTGAGTGGTTAT +
Preference number: 3 (lower is better)
Translates to: IEAQLTHPLCTS*IHAIIAELSGY
Trigger: ATAACCACTCAGCTCTGCTATTATAGCATGAATGCAGCTGGTACATAACGGATGGGTGAGCTGTGCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 72 bp CCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTaGACTCAAGCATGCAAGAGCTTTCTATTTCATTTT +
Preference number: 3 (lower is better)
Translates to: PSGPVFCHFPQW*TQACKSFLFHF
Trigger: AAAATGAAATAGAAAGCTCTTGCATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CAA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTTTGGCATCAAATGCTTaGGTCATACAATACTGTCTC +
Preference number: 3 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCLASNA*VIQYCL
Trigger: GAGACAGTATTGTATGACCAAAGCATTTGATGCCAA...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTCCAACTCTTTCTATaGAGAGTCCACGGTTTTGTG +
Preference number: 3 (lower is better)
Translates to: LPTSFCIARALLCVTIWTFQLFL*RVHGFV
Trigger: CACAAAACCGTGGACTCTCAATAGAAAGAGTTGGAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR TCA 72 bp AAAGAAGGAAAGATGTCAAACCTCAATACACAAGCATaGGCCTTCTTTTCATTGCAGGCCACACAGAGGAAC +
Preference number: 3 (lower is better)
Translates to: KEGKMSNLNTQA*AFFSLQATQRN
Trigger: GTTCCTCTGTGTGGCCTGCAATGAAAAGAAGGCTCATGCTTGTGTATTGAGGTTTGACATCTTTCCTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 72 bp ACTTTCTGGCCAAGAAAGCCTAATGTACTTACTAGCTaGCTCTTTCCAGAGACTGTTTGTCAACCCTGTTTT +
Preference number: 3 (lower is better)
Translates to: TFWPRKPNVLTS*LFPETVCQPCF
Trigger: AAAACAGGGTTGACAAACAGTCTCTGGAAAGAGCCAGCTAGTAAGTACATTAGGCTTTCTTGGCCAGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR GCA 72 bp CAAACCTCAATACACAAGCATGAGCCTTCTTTTCATTaGAGGCCACACAGAGGAACACCACAATTTTTCTTA +
Preference number: 3 (lower is better)
Translates to: QTSIHKHEPSFH*RPHRGTPQFFL
Trigger: TAAGAAAAATTGTGGTGTTCCTCTGTGTGGCCTGCAATGAAAAGAAGGCTCATGCTTGTGTATTGAGGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 72 bp GGCATCAAATGCTTTGGTCATACAATACTGTCTCTGTaGTTCTGGCTGTTTAGCACTAAACACCCAGTTATA +
Preference number: 3 (lower is better)
Translates to: GIKCFGHTILSL*FWLFSTKHPVI
Trigger: TATAACTGGGTGTTTAGTGCTAAACAGCCAGAACCACAGAGACAGTATTGTATGACCAAAGCATTTGATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
3UTR CCA 72 bp TTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTaGACAAAAACTGTCCTCAGTTGCATGAATCCAAGA +
Preference number: 3 (lower is better)
Translates to: FCIARALLCVTI*TKTVLSCMNPR
Trigger: TCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCGGTTTTGTGATGGGTaGTTGATGAAGGAAAGCTCT +
Preference number: 3 (lower is better)
Translates to: SISSTACKVYFDKEICKTRFCDG*LMKESS
Trigger: AGAGCTTTCCTTCATCAACAACCCATCACAAAACCG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAACCAACAACTCCTTaGTACCTCCATTATCCCCAA +
Preference number: 3 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKPTTP*YLHYPQ
Trigger: TTGGGGATAATGGAGGTACAAAGGAGTTGTTGGTTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAAGAGCCCTCTTTTCTaGGCCCTTACAAAACAAATT +
Preference number: 3 (lower is better)
Translates to: SISSTACKVYFDKEICKTKSPLF*ALTKQI
Trigger: AATTTGTTTTGTAAGGGCCAAGAAAAGAGGGCTCTT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAGAGCCCTCTTTTCTaGGCCCTTACAAAACAAATT +
Preference number: 3 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKSPLF*ALTKQI
Trigger: AATTTGTTTTGTAAGGGCCAAGAAAAGAGGGCTCTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTTTGTGATGGGTTGTaGATGAAGGAAAGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: SISSTACKVYFDKEICKTFCDGL*MKESSE
Trigger: TTCAGAGCTTTCCTTCATCAACAACCCATCACAAAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTTTGTGATGGGTTGTaGATGAAGGAAAGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFCDGL*MKESSE
Trigger: TTCAGAGCTTTCCTTCATCAACAACCCATCACAAAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR GCA 72 bp TCAGAACGAAACAGCACAGGACAGGGATTTTTACAATaGTCTTCCATACAATGTCTGGAATCTATAGATAAC +
Preference number: 3 (lower is better)
Translates to: SERNSTGQGFLQ*SSIQCLESIDN
Trigger: GTTATCTATAGATTCCAGACATTGTATGGAAGAGCATTGTAAAAATCCCTGTCCTGTGCTGTTTCGTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674117.1
3UTR-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCTTACATATTCTGGTaGGACTCATGGTTAAAGAAG +
Preference number: 3 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSYIFW*DSWLKK
Trigger: CTTCTTTAACCATGAGTCCAACCAGAATATGTAAGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCTTACATATTCTGGTaGGACTCATGGTTAAAGAAG +
Preference number: 3 (lower is better)
Translates to: SISSTACKVYFDKEICKTSYIFW*DSWLKK
Trigger: CTTCTTTAACCATGAGTCCAACCAGAATATGTAAGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CCA 72 bp CATTACTTTAACGTCAAATTTTGGCATCAAATGCTTTaGTCATACAATACTGTCTCTGTGGTTCTGGCTGTT +
Preference number: 3 (lower is better)
Translates to: HYFNVKFWHQML*SYNTVSVVLAV
Trigger: AACAGCCAGAACCACAGAGACAGTATTGTATGACCAAAGCATTTGATGCCAAAATTTGACGTTAAAGTAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTACCGGGCGCCCCCTCTaGTGGCCCGGGCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLTGRPL*WPGLQT
Trigger: CGTTTGGAGCCCGGGCCAGCAGAGGGGGCGCCCGGT...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGGGCTGCCGGGACCTGTaGTCCCAGCTCTCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILGCRDL*SQLSGP
Trigger: CGGGCCGGAGAGCTGGGAGCACAGGTCCCGGCAGCC...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCCAGCTCTCCGGCCCGTaGGGCGCTCGGCGATGCTCC +
Preference number: 4 (lower is better)
Translates to: QHLLSKALRSMKPARWLVQLSGP*GARRCS
Trigger: GGAGCATCGCCGAGCGCCCCACGGGCCGGAGAGCTG...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTTGGGGCGCTCGGCGATaGTCCCCGGCTCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: LLSKALRSMKPARWLVTCWGARR*SPARTQ
Trigger: CTGCGTCCGAGCCGGGGAGCATCGCCGAGCGCCCCA...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAGGCTCCCCCAGCCCATaGTCCCGGCGCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKALRSMKPARWLVTCKAGSPSP*SRRLAA
Trigger: AGCAGCGAGGCGCCGGGACCATGGGCTGGGGGAGCC...TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCCCAGGGCCAGCGCAATaGTGCCTGCAGCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSPGPAQ*CLQPWG
Trigger: CCCCCATGGCTGCAGGCATCATTGCGCTGGCCCTGG...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGGACCATCCCTGGGGCTaGCGGGACCTGTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILDHPWG*RDLCSQ
Trigger: CTGGGAGCACAGGTCCCGGCAGCCCCAGGGATGGTC...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATCGAGCGCGGCGGAGATaGCCAGCGGGAGCGGTACAG +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANRARRR*PAGAVQ
Trigger: CTGTACCGCTCCCGCTGGTCATCTCCGCCGCGCTCG...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAACCGGGCGCCCCCTCTaGTGGCCCGGGCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTTGRPL*WPGLQT
Trigger: CGTTTGGAGCCCGGGCCAGCAGAGGGGGCGCCCGGT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATCAGGAGGAGGCTGAGTaGGGCGGGCGTCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANQEEAE*GGRPPQ
Trigger: CTGCGGAGGACGCCCGCCCCACTCAGCCTCCTCCTG...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACAGCTCTCCGGCCCGTaGGGCGCTCGGCGATGCTCC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTQLSGP*GARRCS
Trigger: GGAGCATCGCCGAGCGCCCCACGGGCCGGAGAGCTG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCCTCCTAGACCATCCCTaGGGCTGCCGGGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: QHLLSKALRSMKPARWLVLLDHP*GCRDLC
Trigger: GCACAGGTCCCGGCAGCCCCAGGGATGGTCTAGGAG...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCCTGCCCCAGCACAAGTaGCGCAGAAGCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSLPQHK*RRSGGR
Trigger: CCTGCCACCGCTTCTGCGCCACTTGTGCTGGGGCAG...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTAACTTCTCCGGCCTaGGCCGCCCGGCGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLTSPA*AARRAA
Trigger: GGCTGCTCGCCGGGCGGCGCAGGCCGGAGAAGTTAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCTCTCCACACACACGTaGTGCCGGGGAACGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLLSTHT*CRGTVV
Trigger: GACCACCGTTCCCCGGCAGCACGTGTGTGTGGAGAG...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACAGGAGGAGGCTGAGTaGGGCGGGCGTCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTQEEAE*GGRPPQ
Trigger: CTGCGGAGGACGCCCGCCCCACTCAGCCTCCTCCTG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAATGCTGGCGATACGGTTaGCCTCCGGGAAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LSKALRSMKPARWLVTCKCWRYG*PPGSPR
Trigger: CCGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCA...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTCTGCCCCAGCACAAGTaGCGCAGAAGCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLSKALRSMKPARWLVTCLPQHK*RRSGGR
Trigger: CCTGCCACCGCTTCTGCGCCACTTGTGCTGGGGCAG...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTGGGCCGTGGGCCCTaGCACCCCTTGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVGRGP*HPLQLL
Trigger: CAGGAGCTGCAAGGGGTGCCAGGGCCCACGGCCCAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGACCATCCCTGGGGCTaGCGGGACCTGTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTDHPWG*RDLCSQ
Trigger: CTGGGAGCACAGGTCCCGGCAGCCCCAGGGATGGTC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGGGTTTCGCCCGGCTTaGCTCCCGGACTCTCCGACT +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANGFRPA*LPDSPT
Trigger: AGTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCC...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGGCGTCCTCCGCAGTTaGGTTTCGCCCGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANGVLRS*VSPGLA
Trigger: AGCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCC...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATGCTGGCGATACGGTTaGCCTCCGGGAAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTCWRYG*PPGSPR
Trigger: CCGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTGCGAGGTCAGGTAGATaGCCAGGTCTCCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLARSGR*PGLLSW
Trigger: CCAGGAGAGGAGACCTGGCCATCTACCTGACCTCGC...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGCTGCCGGGACCTGTaGTCCCAGCTCTCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGCRDL*SQLSGP
Trigger: CGGGCCGGAGAGCTGGGAGCACAGGTCCCGGCAGCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGCTGCCGGGACCTGTaGTCCCAGCTCTCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTGCRDL*SQLSGP
Trigger: CGGGCCGGAGAGCTGGGAGCACAGGTCCCGGCAGCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATCTAACTTCTCCGGCCTaGGCCGCCCGGCGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYLTSPA*AARRAA
Trigger: GGCTGCTCGCCGGGCGGCGCAGGCCGGAGAAGTTAG...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAGTCCGTCCACAGTCTTaGCATCATCATCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SKALRSMKPARWLVTCKAVRPQS*HHHPGP
Trigger: GGGGCCCGGATGATGATGGCAAGACTGTGGACGGAC...TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGCGTAGGACTCCCCGCTaGTGTAGGTTGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: PARWLVTCKANEVTNEALRRTPR*CRLWPA
Trigger: CGCTGGCCACAACCTACAGCAGCGGGGAGTCCTACG...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAATCCACACACACGTGCTaGCGGGGAACGGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LSKALRSMKPARWLVTCKSTHTC*RGTVVH
Trigger: GTGGACCACCGTTCCCCGGCAGCACGTGTGTGTGGA...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCGCGACGTGCACCTaGATGGTCAGTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILSATCT*MVSGKW
Trigger: CCATTTCCCACTGACCATGCAGGTGCACGTCGCGGA...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGGTTTCGCCCGGCTTaGCTCCCGGACTCTCCGACT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGFRPA*LPDSPT
Trigger: AGTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTCCTAGACCATCCCTaGGGCTGCCGGGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLLDHP*GCRDLC
Trigger: GCACAGGTCCCGGCAGCCCCAGGGATGGTCTAGGAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATACCCTCGCTCGCTGGCTaGTTCCGCGCACTAAGGGCG +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALIPSLAG*FRALRA
Trigger: CGCCCTTAGTGCGCGGAACCAGCCAGCGAGCGAGGG...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGCTCCCCCAGCCCATaGTCCCGGCGCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGSPSP*SRRLAA
Trigger: AGCAGCGAGGCGCCGGGACCATGGGCTGGGGGAGCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGCAGTGGTCTGGTCCTaGCCCGTCACAGCCAACCTC +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANAVVWS*PVTANL
Trigger: GAGGTTGGCTGTGACGGGCCAGGACCAGACCACTGC...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACCCGGTCGGCAGGAGTaGCACTGCCTGCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTPGRQE*HCLLCL
Trigger: GAGACACAGCAGGCAGTGCCACTCCTGCCGACCGGG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAAGACAGGCAGTCTGTaGGCCGTGGGCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTKTGSL*AVGPGT
Trigger: GGTGCCAGGGCCCACGGCCCACAGACTGCCTGTCTT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCCGGCCTTTGCTGCTaGCTGGACTCGGCCACGAGA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAGLCC*LDSATR
Trigger: TCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACGAGCGCGGCGGAGATaGCCAGCGGGAGCGGTACAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTRARRR*PAGAVQ
Trigger: CTGTACCGCTCCCGCTGGTCATCTCCGCCGCGCTCG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCATCTGTCCACGTGCTCCAGGTAGTTaGCATGGCGGTTGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: SWISLSSSMYLCILSICPRAPGS*HGGWGY
Trigger: ATAACCCCAACCGCCATGTCAACTACCTGGAGCACG...TGGACAGATGGACAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCAAGTCCTCTCCTCAGCTGTaGCTCCAGCAGCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: PSGPVFCHFPQWWTQACKSSPQL*LQQHLL
Trigger: TAGAAGATGCTGCTGGAGTCACAGCTGAGGAGAGGA...CTTGCATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAACCGGGCGCCCCCTCTaGTGGCCCGGGCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLTGRPL*WPGLQT
Trigger: CGTTTGGAGCCCGGGCCAGCAGAGGGGGCGCCCGGT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTAACTTCTCCGGCCTaGGCCGCCCGGCGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLTSPA*AARRAA
Trigger: GGCTGCTCGCCGGGCGGCGCAGGCCGGAGAAGTTAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCCCGGCGATTTTGACTaGCCAGTGGTTGGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMPGDFD*PVVGVD
Trigger: GTCTACACCAACCACTGGGCAGTCAAAATCGCCGGG...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCATTGTTTGCAGCGGCTaGCACTTCTCCAGCACAGCG +
Preference number: 4 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSIVCSG*HFSSTA
Trigger: CGCTGTGCTGGAGAAGTGGCAGCCGCTGCAAACAAT...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGGCAGTGCGAATTGTTTaGAGCGGCTGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILAVRIV*SGCHFS
Trigger: GGAGAAGTGGCAGCCGCTGCAAACAATTCGCACTGC...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCATCTTGTCCGTGCAACGCTaGCTCAGATCTGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: QGSWISLSSSMYLCILSILSVQR*LRSVVM
Trigger: CATCACTACAGATCTGAGGCAGCGTTGCACGGACAA...GATGGACAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGCACAGCCAACCTCACTaGACTCAGGGTCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PARWLVTCKANEVTNEALHSQPH*TQGRRD
Trigger: GTCCCTGCGACCCTGAGTGCAGTGAGGTTGGCTGTG...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCATCCAGTGGGAAATGGAATaGACGCTGGTAGACCCCAAT +
Preference number: 4 (lower is better)
Translates to: QGSWISLSSSMYLCILSIQWEME*TLVDPN
Trigger: ATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTG...GATGGACAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGAGTATTTCCGCGACGTaGACCTGCATGGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILSISAT*TCMVSG
Trigger: CCCACTGACCATGCAGGTGCACGTCGCGGAAATACT...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGCCCTGGCACCCCTTaGAGCTCCTGTTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGPGTP*SSCCTS
Trigger: AGAGGTGCAACAGGAGCTGCAAGGGGTGCCAGGGCC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGGAGGAGGCTGAGTaGGGCGGGCGTCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTQEEAE*GGRPPQ
Trigger: CTGCGGAGGACGCCCGCCCCACTCAGCCTCCTCCTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACAGCTCTCCGGCCCGTaGGGCGCTCGGCGATGCTCC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLQLSGP*GARRCS
Trigger: GGAGCATCGCCGAGCGCCCCACGGGCCGGAGAGCTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTGCTGACGTCCCAGTGTaGTTGTCCGTGCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCADVPV*LSVQRC
Trigger: GCAGCGTTGCACGGACAACCACACTGGGACGTCAGC...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCAGTGGTCTGGTCCTaGCCCGTCACAGCCAACCTC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAVVWS*PVTANL
Trigger: GAGGTTGGCTGTGACGGGCCAGGACCAGACCACTGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGTCATTGCAGTGGTCTaGTCCTGGCCCGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANVIAVV*SWPVTA
Trigger: GGCTGTGACGGGCCAGGACCAGACCACTGCAATGAC...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTGGGCCGTGGGCCCTaGCACCCCTTGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVGRGP*HPLQLL
Trigger: CAGGAGCTGCAAGGGGTGCCAGGGCCCACGGCCCAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACGAGCGCGGCGGAGATaGCCAGCGGGAGCGGTACAG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLRARRR*PAGAVQ
Trigger: CTGTACCGCTCCCGCTGGTCATCTCCGCCGCGCTCG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCAGGGCCAGCGCAATaGTGCCTGCAGCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPGPAQ*CLQPWG
Trigger: CCCCCATGGCTGCAGGCATCATTGCGCTGGCCCTGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCAGGGCCAGCGCAATaGTGCCTGCAGCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPGPAQ*CLQPWG
Trigger: CCCCCATGGCTGCAGGCATCATTGCGCTGGCCCTGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGATCTCCCATCCTCCATaGAGTAGCCCTCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILISHPP*SSPLCS
Trigger: ACTGCACAGAGGGCTACTTCATGGAGGATGGGAGAT...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCATCTCCCATCCTCCATaGAGTAGCCCTCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: QHLLSKALRSMKPARWLVISHPP*SSPLCS
Trigger: ACTGCACAGAGGGCTACTTCATGGAGGATGGGAGAT...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCACCGGGCGCCCCCTCTaGTGGCCCGGGCTCCAAACG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRTGRPL*WPGLQT
Trigger: CGTTTGGAGCCCGGGCCAGCAGAGGGGGCGCCCGGT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGGCTGCCGGGACCTGTaGTCCCAGCTCTCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRGCRDL*SQLSGP
Trigger: CGGGCCGGAGAGCTGGGAGCACAGGTCCCGGCAGCC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTCCGTCCACAGTCTTaGCATCATCATCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVRPQS*HHHPGP
Trigger: GGGGCCCGGATGATGATGGCAAGACTGTGGACGGAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAGGTGGTCCACTTCTCTaGCTCCATCACCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: SKALRSMKPARWLVTCKAGGPLL*LHHHGF
Trigger: GAAGCCATGGTGATGGAGGCAGAGAAGTGGACCACC...TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCAGGGTCGCAGGGACCTaGATAATCCTCTGTGCCATA +
Preference number: 4 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSRVAGT*IILCAI
Trigger: TATGGCACAGAGGATTATGCAGGTCCCTGCGACCCT...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAGCACCCATCAGCTCCTaGCCCAGCACAAGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALIAPISS*PSTSGA
Trigger: TGCGCCACTTGTGCTGGGGCAGGAGCTGATGGGTGC...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR GCA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCCAGGACTCTTCCGTTaGATCCTTGCAAATGGCTCC +
Preference number: 4 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMPGLFR*ILANGS
Trigger: GGAGCCATTTGCAAGGATGCAACGGAAGAGTCCTGG...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATGGCAGGGCACAAGGTaGAGTTCTTGGCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTWQGTR*SSWPLV
Trigger: GACCAGGGGCCAAGAACTGCACCTTGTGCCCTGCCA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCAGCTCTCCGGCCCGTaGGGCGCTCGGCGATGCTCC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRQLSGP*GARRCS
Trigger: GGAGCATCGCCGAGCGCCCCACGGGCCGGAGAGCTG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCCTCGCTCGCTGGCTaGTTCCGCGCACTAAGGGCG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPSLAG*FRALRA
Trigger: CGCCCTTAGTGCGCGGAACCAGCCAGCGAGCGAGGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGGCTCCCCCAGCCCATaGTCCCGGCGCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRGSPSP*SRRLAA
Trigger: AGCAGCGAGGCGCCGGGACCATGGGCTGGGGGAGCC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAATCTCCTCTCCTGGGGTaGGTGATGGTGATGCGCACA +
Preference number: 4 (lower is better)
Translates to: LSKALRSMKPARWLVTCKSPLLG*VMVMRT
Trigger: TGTGCGCATCACCATCACCCACCCCAGGAGAGGAGA...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTCATTGCAGTGGTCTaGTCCTGGCCCGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVIAVV*SWPVTA
Trigger: GGCTGTGACGGGCCAGGACCAGACCACTGCAATGAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCAGGGCTGGCAGTCCTaGCCGTTGAAATACCGTCCA +
Preference number: 4 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCQGWQS*PLKYRP
Trigger: TGGACGGTATTTCAACGGCCAGGACTGCCAGCCCTG...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAAGCGGTGGCAGGGCTaGCAGTCCTGGCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTKRWQG*QSWPLK
Trigger: TTTCAACGGCCAGGACTGCCAGCCCTGCCACCGCTT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCGACGTGCACCTGCATaGTCAGTGGGAAATGGAATG +
Preference number: 4 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMRRAPA*SVGNGM
Trigger: CATTCCATTTCCCACTGACCATGCAGGTGCACGTCG...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCCTGGGTTGGTCCCTaGCACTTGGCACATGAGGCC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSWVGP*HLAHEA
Trigger: GGCCTCATGTGCCAAGTGCCAGGGACCAACCCAGGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACCTCCTGGGTCTTGGTaGCATGCACGCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTPPGSW*HARTSH
Trigger: GTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACGGCTCCAGAGCAGATaGCACAGGCCTCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTRLQSR*HRPPYS
Trigger: ACTGTACGGAGGCCTGTGCCATCTGCTCTGGAGCCG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATGGAGGAAGAGAGGGTaGCCCGGCTGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTWRKRG*PGCIWH
Trigger: ATGCCAGATGCAGCCGGGCCACCCTCTCTTCCTCCA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCAGTCTGTGGGCCGTaGGCCCTGGCACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTAVCGP*ALAPLA
Trigger: TGCAAGGGGTGCCAGGGCCCACGGCCCACAGACTGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAGCACTCCTGGGCACTaGGGGGATCAGAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSTPGH*GDQRCC
Trigger: GCAACACCTCTGATCCCCCCAGTGCCCAGGAGTGCT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCGAGCGCGGCGGAGATaGCCAGCGGGAGCGGTACAG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRRARRR*PAGAVQ
Trigger: CTGTACCGCTCCCGCTGGTCATCTCCGCCGCGCTCG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTAGCCCCCGGCGATTTTaGCTGCCCAGTGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSSPRRF*LPSGWC
Trigger: ACACCAACCACTGGGCAGTCAAAATCGCCGGGGGCT...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCAAGTTGGTTCCATTGAAATaGAACTGTGGGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSGPVFCHFPQWWTQACKLVPLK*NCGSLC
Trigger: GCAGAGGGACCCACAGTTTCATTTCAATGGAACCAA...CTTGCATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AGGATAGTCCATGTTGATAGTATTCCTCTCCTCAGCTGTGACTCCAGCAGCATCCTCCGATCTTGGCGTTaGAAGCAATTCCGACTGTGC +
Preference number: 4 (lower is better)
Translates to: RIVHVDSIPLLSCDSSSILRSWR*KQFRLC
Trigger: GCACAGTCGGAATTGCTTTCAACGCCAAGATCGGAG...GATGCTGCTGGAGTCACAGCTGAGGAGAGGAATACTATCAACATGGACTATCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTTTCTGCAGTGCTGCTaGTGGAGATGGTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILFLQCC*WRWCRC
Trigger: GCATCTACACCATCTCCATCAGCAGCACTGCAGAAA...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCAGCTTGTACAGTTCTTaGATCCTGGGCCATTGCACG +
Preference number: 4 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSSLYSS*ILGHCT
Trigger: CGTGCAATGGCCCAGGATTCAAGAACTGTACAAGCT...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACCAGTACTCGGAGGGTaGGCACTTCTCGTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTPVLGG*ALLVGH
Trigger: ATGGCCAACGAGAAGTGCTCACCCTCCGAGTACTGG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCTAACTTCTCCGGCCTaGGCCGCCCGGCGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLTSPA*AARRAA
Trigger: GGCTGCTCGCCGGGCGGCGCAGGCCGGAGAAGTTAG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTGCACAGCGAGTCCCATaGTTGTTCTCGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LLSKALRSMKPARWLVTCAQRVP*LFSLLA
Trigger: TGCAAGCAACGAGAACAAGCATGGGACTCGCTGTGC...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCCAGAAGCATGAAGCCTaGAAGATGGCTGGTCACTTG +
Preference number: 4 (lower is better)
Translates to: QHLLSKALRSMKPARWLVQKHEA*KMAGHL
Trigger: CAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTG...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACATGACCAGGGCCTGTaGAGGTTTCGCATGCTCGGT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTHDQGL*RFRMLG
Trigger: ACCGAGCATGCGAAACCTGCACAGGCCCTGGTCATG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATGGCCCCTGGTCCCTTaGATTCCATGCAGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTWPLVP*IPCSSR
Trigger: ACGAGAGCTGCATGGAATGCAAGGGACCAGGGGCCA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACGGGCTCAAGTGATTTaGCTGCCTCAGCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTRAQVI*LPQPPE
Trigger: CTCAGGAGGCTGAGGCAGGCAAATCACTTGAGCCCG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCACCCAGGCTGGAGTaGAATGGTGCCATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSPRLE*NGAISA
Trigger: AGCGGAGATGGCACCATTGCACTCCAGCCTGGGTGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCAGGAGGAGGCTGAGTaGGGCGGGCGTCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRQEEAE*GGRPPQ
Trigger: CTGCGGAGGACGCCCGCCCCACTCAGCCTCCTCCTG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCCTCGCTCGCTGGCTaGTTCCGCGCACTAAGGGCG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPSLAG*FRALRA
Trigger: CGCCCTTAGTGCGCGGAACCAGCCAGCGAGCGAGGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTCCATCACAGGAGCAGTaGTCTTTGCTCCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: LLSKALRSMKPARWLVTCPSQEQ*SLLLPP
Trigger: TGGTGGAAGGAGCAAAGACCACTGCTCCTGTGATGG...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATAGGTCAGAAACGGATTaGCTTCCAGGGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANRSETD*LPGPAQ
Trigger: TTGCGCTGGCCCTGGAAGCCAATCCGTTTCTGACCT...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATGCTGCCGGGGAACGGTaGTCCACTTCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYAAGER*STSLPP
Trigger: TGGAGGCAGAGAAGTGGACCACCGTTCCCCGGCAGC...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCTCCTCTCCTGGGGTaGGTGATGGTGATGCGCACA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSPLLG*VMVMRT
Trigger: TGTGCGCATCACCATCACCCACCCCAGGAGAGGAGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCTGCCATAGTCGTCTGTaGGGTCTTCAACTCGGCTAT +
Preference number: 4 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSCHSRL*GLQLGY
Trigger: ATAGCCGAGTTGAAGACCCCACAGACGACTATGGCA...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CACCTGCATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTATGCATTGGTCACCATaGCTCCCAAAGCAGGACTCA +
Preference number: 4 (lower is better)
Translates to: HLHGQWEMECTLVDPNEFMHWSP*LPKQDS
Trigger: TGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCAT...AAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAAAGCGGTGGCAGGGCTaGCAGTCCTGGCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALIKRWQG*QSWPLK
Trigger: TTTCAACGGCCAGGACTGCCAGCCCTGCCACCGCTT...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTGCCCCAGCACAAGTaGCGCAGAAGCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLPQHK*RRSGGR
Trigger: CCTGCCACCGCTTCTGCGCCACTTGTGCTGGGGCAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAGCCCTCCGGGCACTTaGAGTAGCACCTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSPPGT*SSTCLH
Trigger: ATGAAGGCAGGTGCTACTCCAAGTGCCCGGAGGGCT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACCACGGGGACAGGACTaGTGGCACATATCATCGTGC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTPRGQD*WHISSC
Trigger: GCACGATGATATGTGCCACCAGTCCTGTCCCCGTGG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCCGGCCCCATGCAGTaGAAGCACTTAACATGGCAG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAGPMQ*KHLTWQ
Trigger: CTGCCATGTTAAGTGCTTCCACTGCATGGGGCCGGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCAGTCTGTGGGCCGTaGGCCCTGGCACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLAVCGP*ALAPLA
Trigger: TGCAAGGGGTGCCAGGGCCCACGGCCCACAGACTGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAGACAGGCAGTCTGTaGGCCGTGGGCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKTGSL*AVGPGT
Trigger: GGTGCCAGGGCCCACGGCCCACAGACTGCCTGTCTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATGTGCAGCACCAGGTTaGCAGGGCACAAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTCAAPG*QGTRCS
Trigger: ACTGCACCTTGTGCCCTGCCAACCTGGTGCTGCACA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGCCGGCCTTTGCTGCTaGCTGGACTCGGCCACGAGA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTAGLCC*LDSATR
Trigger: TCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATCTTCAACCATGTCCGTaGCATCTCCGTCCAGCATTC +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANLQPCP*HLRPAF
Trigger: GAATGCTGGACGGAGATGTCACGGACATGGTTGAAG...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCCAGGGCCAGCGCAATaGTGCCTGCAGCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRPGPAQ*CLQPWG
Trigger: CCCCCATGGCTGCAGGCATCATTGCGCTGGCCCTGG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACGTGCTCCAGGTAGTTaGCATGGCGGTTGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTRAPGS*HGGWGY
Trigger: ATAACCCCAACCGCCATGTCAACTACCTGGAGCACG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTGTTGGCCAAAAGCTaGGACCTAGTTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLLAKS*DLVPEG
Trigger: GCCCTCTGGAACTAGGTCTCAGCTTTTGGCCAACAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCATCTGTCCAAATCCTTCCATGGAGTaGTCAAATAGCCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SWISLSSSMYLCILSICPNPSME*SNSLLA
Trigger: GGCCAACAGGCTATTTGATCACTCCATGGAAGGATT...TGGACAGATGGACAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGGGTCAAAGTAATAGCTaGTACTACAGCTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILGQSNS*YYSSAR
Trigger: GCGTGCAGAGCTGTAGTATCAGCTATTACTTTGACC...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCATCTGTCCATTGCAGCAAAGTTGTTaGAGAACCTTCCGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SWISLSSSMYLCILSICPLQQSC*RTFRWH
Trigger: GTGCCAACGGAAGGTTCTTCAACAACTTTGCTGCAA...TGGACAGATGGACAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCATCATCCATGTTTCACTGTaGAATACCATGGCAAACGAC +
Preference number: 4 (lower is better)
Translates to: QGSWISLSSSMYLCILSIIHVSL*NTMAND
Trigger: GTCGTTTGCCATGGTATTTCACAGTGAAACATGGAT...GATGGACAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGTCCTCTCCTCAGCTGTaGCTCCAGCAGCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: PARWLVTCKANEVTNEALSSPQL*LQQHLL
Trigger: TAGAAGATGCTGCTGGAGTCACAGCTGAGGAGAGGA...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTAAGGGGGTCCACGTaGGAGGGTCATGATCGATTG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLRGST*EGHDRL
Trigger: CAATCGATCATGACCCTCTCACGTGGACCCCCTTAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGACCATCCCTGGGGCTaGCGGGACCTGTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRDHPWG*RDLCSQ
Trigger: CTGGGAGCACAGGTCCCGGCAGCCCCAGGGATGGTC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTAGTGCATATACCACATaGTGGGCCACTTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLSAYTT*WATWDH
Trigger: ATGATCCCAAGTGGCCCAGCATGTGGTATATGCACT...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCAGTGCGAATTGTTTaGAGCGGCTGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAVRIV*SGCHFS
Trigger: GGAGAAGTGGCAGCCGCTGCAAACAATTCGCACTGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCGTAGGACTCCCCGCTaGTGTAGGTTGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTRRTPR*CRLWPA
Trigger: CGCTGGCCACAACCTACAGCAGCGGGGAGTCCTACG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGTGGTCCACTTCTCTaGCTCCATCACCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGGPLL*LHHHGF
Trigger: GAAGCCATGGTGATGGAGGCAGAGAAGTGGACCACC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCCACACACACGTGCTaGCGGGGAACGGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSTHTC*RGTVVH
Trigger: GTGGACCACCGTTCCCCGGCAGCACGTGTGTGTGGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTCTCCACACACACGTaGTGCCGGGGAACGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLSTHT*CRGTVV
Trigger: GACCACCGTTCCCCGGCAGCACGTGTGTGTGGAGAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTGTAGATGGAGCGCACTaGACTGTTAGGGCGGATTGT +
Preference number: 4 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCVDGAH*TVRADC
Trigger: ACAATCCGCCCTAACAGTGCAGTGCGCTCCATCTAC...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCACTGCATAATCCTCTGTaGCATAGTCGTCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SKALRSMKPARWLVTCKALHNPL*HSRLWG
Trigger: ACCCCACAGACGACTATGGCACAGAGGATTATGCAG...TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCACCCATCAGCTCCTaGCCCAGCACAAGTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTAPISS*PSTSGA
Trigger: TGCGCCACTTGTGCTGGGGCAGGAGCTGATGGGTGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGCTGATACTACAGCTCTaGACGCATCTCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: PARWLVTCKANEVTNEALLILQL*THLPSS
Trigger: GGAGGATGGGAGATGCGTGCAGAGCTGTAGTATCAG...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR GCA 90 bp AGGATAGTCCATGTTGATAGTATTCCTCTCCTCAGCTGTGACTCCAGCAGCATCCAGAAGCATGAAGCCTaGAAGATGGCTGGTCACTTG +
Preference number: 4 (lower is better)
Translates to: RIVHVDSIPLLSCDSSSIQKHEA*KMAGHL
Trigger: CAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTG...GATGCTGCTGGAGTCACAGCTGAGGAGAGGAATACTATCAACATGGACTATCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR GCA 90 bp AGGATAGTCCATGTTGATAGTATTCCTCTCCTCAGCTGTGACTCCAGCAGCATCGGCTTTTTCCTAGCTTaGTGTTTGGATGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: RIVHVDSIPLLSCDSSSIGFFLA*CLDGDL
Trigger: GAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCC...GATGCTGCTGGAGTCACAGCTGAGGAGAGGAATACTATCAACATGGACTATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGCCCTGGCACCCCTTaGAGCTCCTGTTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGPGTP*SSCCTS
Trigger: AGAGGTGCAACAGGAGCTGCAAGGGGTGCCAGGGCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCTGGAGTGCAATGGTaGCATCTCCGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAGVQW*HLRSLQ
Trigger: TTGCAGTGAGCGGAGATGGCACCATTGCACTCCAGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGGGTTTCGCCCGGCTTaGCTCCCGGACTCTCCGACT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLGFRPA*LPDSPT
Trigger: AGTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCCCTCGCTCGCTGGCTaGTTCCGCGCACTAAGGGCG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRPSLAG*FRALRA
Trigger: CGCCCTTAGTGCGCGGAACCAGCCAGCGAGCGAGGG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTGCTGGCGATACGGTTaGCCTCCGGGAAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRCWRYG*PPGSPR
Trigger: CCGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCTGCCGGGGAACGGTaGTCCACTTCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTAAGER*STSLPP
Trigger: TGGAGGCAGAGAAGTGGACCACCGTTCCCCGGCAGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGCTGCCGGGGAACGGTaGTCCACTTCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTAAGER*STSLPP
Trigger: TGGAGGCAGAGAAGTGGACCACCGTTCCCCGGCAGC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTAGCAGGACTCACAGTTaGGGGCACACTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSSRTHS*GHTSCS
Trigger: GCTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCT...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTGCCCCAGCACAAGTaGCGCAGAAGCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLPQHK*RRSGGR
Trigger: CCTGCCACCGCTTCTGCGCCACTTGTGCTGGGGCAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTTGTCAGAAGGGCCTGTaGTGTTATAAGGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLCQKGL*CYKGKT
Trigger: AGTCTTCCCCTTATAACACCACAGGCCCTTCTGACA...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAACACCTGCATGGTCAGTaGGAAATGGAATGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LSKALRSMKPARWLVTCKHLHGQ*EMECTL
Trigger: CAGCGTGCATTCCATTTCCCACTGACCATGCAGGTG...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAATTTGCCCTCCTCCTaGGTCTTGGTGGCATGCACG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTNLPSS*VLVACT
Trigger: CGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGAAGGCCATGTGCCTTaGGGACAGGAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTEGHVP*GQEETQ
Trigger: CTGTGTTTCCTCCTGTCCCCAAGGCACATGGCCTTC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCCTGGCACACTCCGTaGTGCAGGACGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSWHTP*CRTWPP
Trigger: AGGAGGCCACGTCCTGCACCACGGAGTGTGCCAGGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCGCAGTCGTCGGCTTTaGGGCCACTGCACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTRSRRL*GHCTPD
Trigger: GTCTGGAGTGCAGTGGCCCCAAAGCCGACGACTGCG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACGCAGTCGTCGGCTTTaGGGCCACTGCACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTRSRRL*GHCTPD
Trigger: GTCTGGAGTGCAGTGGCCCCAAAGCCGACGACTGCG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGCCTTTCTGACAGGTaGTGCAGGTCCCAGATGATG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGLSDR*CRSQMM
Trigger: CATCATCTGGGACCTGCACCACCTGTCAGAAAGGCC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCCGGTCGGCAGGAGTaGCACTGCCTGCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPGRQE*HCLLCL
Trigger: GAGACACAGCAGGCAGTGCCACTCCTGCCGACCGGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCAGTTCTTGGCCCCTaGTCCCTTGCATTCCATGCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAVLGP*SLAFHA
Trigger: TGCATGGAATGCAAGGGACCAGGGGCCAAGAACTGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACCTGGGGTGACCTCATaGCTCCTCAGCTATGATGCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTPGVTS*LLSYDA
Trigger: TGCATCATAGCTGAGGAGCCATGAGGTCACCCCAGG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCACACCTTTGGTTCCATTaGAATGAAACTGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SKALRSMKPARWLVTCKAHLWFH*NETVGP
Trigger: GGGACCCACAGTTTCATTTCAATGGAACCAAAGGTG...TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTCCGATCTTGGCGTTaGAAGCAATTCCGACTGTGC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLRSWR*KQFRLC
Trigger: GCACAGTCGGAATTGCTTTCAACGCCAAGATCGGAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTTCAACCATGTCCGTaGCATCTCCGTCCAGCATTC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLQPCP*HLRPAF
Trigger: GAATGCTGGACGGAGATGTCACGGACATGGTTGAAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTTATCCGAGCAGCCTaGAGCTTTGTAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVIRAA*SFVDGA
Trigger: CGCTCCATCTACAAAGCTTCAGGCTGCTCGGATAAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGACCCATCAGGGCAGTaGGTAACACAGCTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTDPSGQ*VTQLLV
Trigger: AACCAACAGCTGTGTTACTCACTGCCCTGATGGGTC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGCTTGGTATCCTGATATaGCCCATCAGGGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PARWLVTCKANEVTNEALLGILI*PIRAVS
Trigger: ACTCACTGCCCTGATGGGTCATATCAGGATACCAAG...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAGGCAGTCCTGGCCGTTaGAATACCGTCCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALIGSPGR*NTVHLH
Trigger: GTGAAGATGGACGGTATTTCAACGGCCAGGACTGCC...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAGGTCAAAGTAATAGCTaGTACTACAGCTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: SKALRSMKPARWLVTCKAGQSNS*YYSSAR
Trigger: GCGTGCAGAGCTGTAGTATCAGCTATTACTTTGACC...TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR TCA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAAGCTTGTACAGTTCTTaGATCCTGGGCCATTGCACG +
Preference number: 4 (lower is better)
Translates to: LSKALRSMKPARWLVTCKSLYSS*ILGHCT
Trigger: CGTGCAATGGCCCAGGATTCAAGAACTGTACAAGCT...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR TCA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGATGGCTGCTCAGCCTTaGAATGTACATGTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMMAAQP*NVHVLQ
Trigger: CTGCAAAACATGTACATTTCAAGGCTGAGCAGCCAT...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCAAGTGTCCATCACCAATTTaGCTATACAGAGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: PSGPVFCHFPQWWTQACKCPSPI*LYRAIP
Trigger: TGGGATTGCTCTGTATAGTCAAATTGGTGATGGACA...CTTGCATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTGGCACTTGGCACATaGGGCCTCACAGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLALGT*GLTGLA
Trigger: TGCCAGACCTGTGAGGCCTCATGTGCCAAGTGCCAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTGCTGCACTCGTCATaGCCAGGGCCTGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLLHSS*PGPVQV
Trigger: AACCTGCACAGGCCCTGGTCATGACGAGTGCAGCAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGAGGAAACACAGGCCTaGGCCAGAAGATATGCACCT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTEETQA*ARRYAP
Trigger: AGGTGCATATCTTCTGGCTCAGGCCTGTGTTTCCTC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTCATGGGGCATGTTTaGCACTGGTCCTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTFMGHV*HWSSAG
Trigger: GCCGGCGGAGGACCAGTGTCAAACATGCCCCATGAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCTGGGCAGGAGCGATaGCACTCTCCTTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSGQER*HSPLER
Trigger: CCGCTCCAAAGGAGAGTGTCATCGCTCCTGCCCAGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCCACCTTAGCCTCCTaGGTAGCTGAGACTACAGAC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSTLAS*VAETTD
Trigger: GTCTGTAGTCTCAGCTACTCAGGAGGCTAAGGTGGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGCATGCTTGTTCTCGTTaGTTGCATCATAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILHACSR*LHHNEA
Trigger: TGCCTCGTTATGATGCAAGCAACGAGAACAAGCATG...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCACAGCGAGTCCCATaGTTGTTCTCGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAQRVP*LFSLLA
Trigger: TGCAAGCAACGAGAACAAGCATGGGACTCGCTGTGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTATTCCGACTGTGCAGTaGGAATTGTTTGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCIPTVQ*ELFAAA
Trigger: AGCCGCTGCAAACAATTCGCACTGCACAGTCGGAAT...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTCCGTCCACAGTCTTaGCATCATCATCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVRPQS*HHHPGP
Trigger: GGGGCCCGGATGATGATGGCAAGACTGTGGACGGAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTCAGTGTGGTTGTCCGTaGAACGCTGCCTCAGATCTG +
Preference number: 4 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSQCGCP*NAASDL
Trigger: CAGATCTGAGGCAGCGTTGCACGGACAACCACACTG...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCCACACACACGTGCTaGCGGGGAACGGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSTHTC*RGTVVH
Trigger: GTGGACCACCGTTCCCCGGCAGCACGTGTGTGTGGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTCTCCACACACACGTaGTGCCGGGGAACGGTGGTC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLSTHT*CRGTVV
Trigger: GACCACCGTTCCCCGGCAGCACGTGTGTGTGGAGAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTAGATGGAGCGCACTaGACTGTTAGGGCGGATTGT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVDGAH*TVRADC
Trigger: ACAATCCGCCCTAACAGTGCAGTGCGCTCCATCTAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACACAGCCAACCTCACTaGACTCAGGGTCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHSQPH*TQGRRD
Trigger: GTCCCTGCGACCCTGAGTGCAGTGAGGTTGGCTGTG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTTGGGGGCACACTTCCTaGAGCGCTTCTTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVWGHTS*SASCRR
Trigger: ACGCCGACAAGAAGCGCTGCAGGAAGTGTGCCCCCA...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGGGGGCACACTTCCTaGAGCGCTTCTTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTWGHTS*SASCRR
Trigger: ACGCCGACAAGAAGCGCTGCAGGAAGTGTGCCCCCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CACCTGCATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTAGGCAAATTCGGTTTTaGCATCTGCTTGACCTTGCT +
Preference number: 4 (lower is better)
Translates to: HLHGQWEMECTLVDPNEFRQIRF*HLLDLA
Trigger: AGCAAGGTCAAGCAGATGGCAAAACCGAATTTGCCT...AAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTTCCTGGCAGCTGCTaGACTCGTCATGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLPGSC*TRHDQG
Trigger: GCCCTGGTCATGACGAGTGCAGCAGCTGCCAGGAAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATCCCACGCAGCAGCTaGAGTCCTTCCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTIPRSS*SPSWQL
Trigger: CAGCTGCCAGGAAGGACTGCAGCTGCTGCGTGGGAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATGGGTCTTGGTGGCATaGACGCACATCCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTWVLVA*THIPRS
Trigger: GCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTACGGAAGGCCATGTaGCTTGGGGACAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLRKAM*LGDRRK
Trigger: TTTCCTCCTGTCCCCAAGGCACATGGCCTTCCGTAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAACATATGCCGTCTTCTaGATAAGAGCCCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTTYAVF*IRALRA
Trigger: TGCCCGGAGGGCTCTTATGCAGAAGACGGCATATGT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCCTTCACAGCCACGTaGCTCTCGGGGCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPFTAT*LSGQFS
Trigger: GGAAAACTGCCCCGAGAGGCACGTGGCTGTGAAGGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACGGCTTTGGGGCCACTaGACTCCAGACAGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTRLWGH*TPDSLY
Trigger: ATAAAGACTGTCTGGAGTGCAGTGGCCCCAAAGCCG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCTTGCAGCTCCTGTTaGACCTCTCACACCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPCSSC*TSHTGQ
Trigger: CTGGCCGGTGTGAGAGGTGCAACAGGAGCTGCAAGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGGCAGGGCACAAGGTaGAGTTCTTGGCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTWQGTR*SSWPLV
Trigger: GACCAGGGGCCAAGAACTGCACCTTGTGCCCTGCCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGGCTGTCGTCCATGTaGAGCACCAGGTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTWLSSM*STRLAG
Trigger: CCCTGCCAACCTGGTGCTGCACATGGACGACAGCCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATGGCTGTCGTCCATGTaGAGCACCAGGTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTWLSSM*STRLAG
Trigger: CCCTGCCAACCTGGTGCTGCACATGGACGACAGCCA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCACACTACCACAGCTaGCCCGAGCAGAAGCACCAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPHYHS*PEQKHQ
Trigger: CTGGTGCTTCTGCTCGGGGCAGCTGTGGTAGTGTGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATAGCCGGCCTTTGCTaGTGGCTGGACTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLIAGLC*WLDSAT
Trigger: CGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTCATAGCCGGCCTTTaGTGCTGGCTGGACTCGGCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTFIAGL*CWLDSA
Trigger: GGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTGTTGGTGGGGGAGTaGCTGTTTACTGGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVLVGE*LFTGSR
Trigger: CCTACTACCAGTAAACAGGCACTCCCCCACCAACAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCAGGTGGTCTCTTCTaGTCACCAGGGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPGGLF*SPGVAW
Trigger: CCAGGCCACCCCTGGTGAGCAGAAGAGACCACCTGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGGGTTTCGCCCGGCTTaGCTCCCGGACTCTCCGACT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRGFRPA*LPDSPT
Trigger: AGTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCTCCTAGACCATCCCTaGGGCTGCCGGGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLLDHP*GCRDLC
Trigger: GCACAGGTCCCGGCAGCCCCAGGGATGGTCTAGGAG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp CCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCAAGGTTTTGCATCAGATCTaGATGGGTTCTCTCAATTCC +
Preference number: 4 (lower is better)
Translates to: PSGPVFCHFPQWWTQACKVLHQI*MGSLNS
Trigger: GGAATTGAGAGAACCCATCCAGATCTGATGCAAAAC...CTTGCATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCTGACGTCCCAGTGTaGTTGTCCGTGCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTADVPV*LSVQRC
Trigger: GCAGCGTTGCACGGACAACCACACTGGGACGTCAGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCGAGGTCAGGTAGATaGCCAGGTCTCCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTARSGR*PGLLSW
Trigger: CCAGGAGAGGAGACCTGGCCATCTACCTGACCTCGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTCATTGCAGTGGTCTaGTCCTGGCCCGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVIAVV*SWPVTA
Trigger: GGCTGTGACGGGCCAGGACCAGACCACTGCAATGAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAAACAGTCATTGCAGTaGTCTGGTCCTGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTKQSLQ*SGPGPS
Trigger: TGACGGGCCAGGACCAGACCACTGCAATGACTGTTT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAAGCGGTGGCAGGGCTaGCAGTCCTGGCCGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTKRWQG*QSWPLK
Trigger: TTTCAACGGCCAGGACTGCCAGCCCTGCCACCGCTT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGACAGTTCTTGAATCCTaGGCCATTGCACGTCAAACA +
Preference number: 4 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMTVLES*AIARQT
Trigger: TGTTTGACGTGCAATGGCCCAGGATTCAAGAACTGT...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACAGTTCTTGAATCCTaGGCCATTGCACGTCAAACA +
Preference number: 4 (lower is better)
Translates to: QHLLSKALRSMKPARWLVTVLES*AIARQT
Trigger: TGTTTGACGTGCAATGGCCCAGGATTCAAGAACTGT...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR CCA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAACATTTCCCCCAATGGTaGACTCAAGCATGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LSKALRSMKPARWLVTCKHFPQW*TQACKS
Trigger: GCTCTTGCATGCTTGAGTCCACCATTGGGGGAAATG...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGGAATTTCAGGGGAGCTaGATCAGCCTCAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: PARWLVTCKANEVTNEALEFQGS*ISLSSS
Trigger: AGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCAGCCTGCAAGATGGCTaGTCACTTGTAAAGCAAATG +
Preference number: 4 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSSLQDG*SLVKQM
Trigger: CATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCT...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCATGAAGCCTGCAAGATaGCTGGTCACTTGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: QHLLSKALRSMKPARWLVMKPAR*LVTCKA
Trigger: TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCAT...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCCTGGGTTGGTCCCTaGCACTTGGCACATGAGGCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSWVGP*HLAHEA
Trigger: GGCCTCATGTGCCAAGTGCCAGGGACCAACCCAGGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCACAGGAGGTGCAGTaGGTAGGGCCACTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPQEVQ*VGPLPW
Trigger: CCAAGGAAGTGGCCCTACCCACTGCACCTCCTGTGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGGTGTTCCCCTCAGTaGCATAGTGGCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTRCSPQ*HSGPLG
Trigger: GCCCAGAGGGCCACTATGCCACTGAGGGGAACACCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCTCCTGGGTCTTGGTaGCATGCACGCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPPGSW*HARTSH
Trigger: GTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCTCCTCCTGGGTCTTaGTGGCATGCACGCACATCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPPPGS*WHARTS
Trigger: GGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCTCCTCCTGGGTCTTaGTGGCATGCACGCACATCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPPPGS*WHARTS
Trigger: GGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACGGCTCCAGAGCAGATaGCACAGGCCTCCGTACAGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTRLQSR*HRPPYS
Trigger: ACTGTACGGAGGCCTGTGCCATCTGCTCTGGAGCCG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCCTGGCACACTCCGTaGTGCAGGACGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSWHTP*CRTWPP
Trigger: AGGAGGCCACGTCCTGCACCACGGAGTGTGCCAGGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCGGGGCAGTTTTCCTaGCACACTCCGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSGQFS*HTPWCR
Trigger: CCTGCACCACGGAGTGTGCCAGGAAAACTGCCCCGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAAGAGCTGTGGCAGTaGGCACACCGGTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTQELWQ*AHRLLS
Trigger: GGACAGCAACCGGTGTGCCCACTGCCACAGCTCTTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACAAGAGCTGTGGCAGTaGGCACACCGGTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTQELWQ*AHRLLS
Trigger: GGACAGCAACCGGTGTGCCCACTGCCACAGCTCTTG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGCAGTGGAGGCAGTaGCTGTCGTCCATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTQQWRQ*LSSMCS
Trigger: GCTGCACATGGACGACAGCCACTGCCTCCACTGCTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGAGGTGTTGCAGCAGTaGAGGCAGTGGCTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTEVLQQ*RQWLSS
Trigger: GGACGACAGCCACTGCCTCCACTGCTGCAACACCTC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGCACTCCTGGGCACTaGGGGGATCAGAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSTPGH*GDQRCC
Trigger: GCAACACCTCTGATCCCCCCAGTGCCCAGGAGTGCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCAGCCCAGCCCAGGTaGTCTCTTCTGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLAAQPR*SLLLTR
Trigger: CCTGGTGAGCAGAAGAGACCACCTGGGCTGGGCTGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTTCTGCAGTGCTGCTaGTGGAGATGGTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTFLQCC*WRWCRC
Trigger: GCATCTACACCATCTCCATCAGCAGCACTGCAGAAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTGTTATCCGAGCAGCCTaGAGCTTTGTAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSVIRAA*SFVDGA
Trigger: CGCTCCATCTACAAAGCTTCAGGCTGCTCGGATAAC...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTTGGTATCCTGATATaGCCCATCAGGGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLGILI*PIRAVS
Trigger: ACTCACTGCCCTGATGGGTCATATCAGGATACCAAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCATTTTTCTTGGTATCCTaGTATGACCCATCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SKALRSMKPARWLVTCKAFFLVS*YDPSGQ
Trigger: CTGCCCTGATGGGTCATATCAGGATACCAAGAAAAA...TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAGCTTGTACAGTTCTTaGATCCTGGGCCATTGCACG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSLYSS*ILGHCT
Trigger: CGTGCAATGGCCCAGGATTCAAGAACTGTACAAGCT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCCAAATGGCTCCCATTTaGCACATTCCTAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSQMAPI*HIPKSK
Trigger: CTTAGACTTAGGAATGTGTCAAATGGGAGCCATTTG...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTGGCACTTGGCACATaGGGCCTCACAGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLALGT*GLTGLA
Trigger: TGCCAGACCTGTGAGGCCTCATGTGCCAAGTGCCAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTGCTGCACTCGTCATaGCCAGGGCCTGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLLHSS*PGPVQV
Trigger: AACCTGCACAGGCCCTGGTCATGACGAGTGCAGCAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTCATGGGGCATGTTTaGCACTGGTCCTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLFMGHV*HWSSAG
Trigger: GCCGGCGGAGGACCAGTGTCAAACATGCCCCATGAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCTGGGCAGGAGCGATaGCACTCTCCTTTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSGQER*HSPLER
Trigger: CCGCTCCAAAGGAGAGTGTCATCGCTCCTGCCCAGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGCGCGCGAGGATTCTaGGTGGCAATGGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSARGF*VAMAAA
Trigger: AGCTGCTGCCATTGCCACTCAGAATCCTCGCGCGCT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545128.5
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTGGTATCAAACTCCTaGCTTCAGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLVSNS*LQVICL
Trigger: CAGGCAGATCACCTGAAGTCAGGAGTTTGATACCAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTTCCTCCCTTAGATTaGGGCAGTGCTGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTFPPLD*GSADEA
Trigger: TGCCTCATCAGCACTGCCTCAATCTAAGGGAGGAAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR GCA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTCTTGTTCTCGTTGCTTaGATCATAACGAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LLSKALRSMKPARWLVTCLVLVA*IITRHW
Trigger: CCAATGCCTCGTTATGATGCAAGCAACGAGAACAAG...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAGCAATTCCGACTGTaGAGTGCGAATTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LLSKALRSMKPARWLVTCKQFRL*SANCLQ
Trigger: CTGCAAACAATTCGCACTGCACAGTCGGAATTGCTT...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCGTAGGACTCCCCGCTaGTGTAGGTTGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRRRTPR*CRLWPA
Trigger: CGCTGGCCACAACCTACAGCAGCGGGGAGTCCTACG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTGTCCGTGCAACGCTaGCTCAGATCTGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLSVQR*LRSVVM
Trigger: CATCACTACAGATCTGAGGCAGCGTTGCACGGACAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTCCACACACACGTGCTaGCGGGGAACGGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRSTHTC*RGTVVH
Trigger: GTGGACCACCGTTCCCCGGCAGCACGTGTGTGTGGA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCTCTCCACACACACGTaGTGCCGGGGAACGGTGGTC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLSTHT*CRGTVV
Trigger: GACCACCGTTCCCCGGCAGCACGTGTGTGTGGAGAG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTATGGCTGCACGGAGGTaGCGTAGAGGACCAAAGACC +
Preference number: 4 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVMAARR*RRGPKT
Trigger: GGTCTTTGGTCCTCTACGGCACCTCCGTGCAGCCAT...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAATGGCTGCACGGAGGTaGCGTAGAGGACCAAAGACC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTMAARR*RRGPKT
Trigger: GGTCTTTGGTCCTCTACGGCACCTCCGTGCAGCCAT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATGGCTGCACGGAGGTaGCGTAGAGGACCAAAGACC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTMAARR*RRGPKT
Trigger: GGTCTTTGGTCCTCTACGGCACCTCCGTGCAGCCAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAAGTGCAAACAGTCATTaGAGTGGTCTGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALISANSH*SGLVLA
Trigger: GGCCAGGACCAGACCACTGCAATGACTGTTTGCACT...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGGGGGCACACTTCCTaGAGCGCTTCTTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLWGHTS*SASCRR
Trigger: ACGCCGACAAGAAGCGCTGCAGGAAGTGTGCCCCCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATACTGATACTACAGCTCTaGACGCATCTCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALILILQL*THLPSS
Trigger: GGAGGATGGGAGATGCGTGCAGAGCTGTAGTATCAG...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR GCA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGCTTCCGTTGCATCCTTaGAAATGGCTCCCATTTGAC +
Preference number: 4 (lower is better)
Translates to: PARWLVTCKANEVTNEALLPLHP*KWLPFD
Trigger: GTCAAATGGGAGCCATTTGCAAGGATGCAACGGAAG...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAGTTCACCATCTCCCTaGACAAACTTGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLSKALRSMKPARWLVTCSSPSP*TNLRER
Trigger: TCTCTCTCTCAAGTTTGTGCAGGGAGATGGTGAACT...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCTCATCTATGTACCTCTaGATTCTGTCCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QHLLSKALRSMKPARWLVSSMYL*ILSICP
Trigger: TGGACAGATGGACAGAATGCAGAGGTACATAGATGA...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CACCTGCATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTAGCACCAAGAGATTGTaGAGGGTCTACAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: HLHGQWEMECTLVDPNEFSTKRL*RVYKVN
Trigger: GTTAACTTTGTAGACCCTGCACAATCTCTTGGTGCT...AAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTTCCTGGCAGCTGCTaGACTCGTCATGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLPGSC*TRHDQG
Trigger: GCCCTGGTCATGACGAGTGCAGCAGCTGCCAGGAAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTCCTTCCTGGCAGCTaGTGCACTCGTCATGACCAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVLPGS*CTRHDQ
Trigger: CTGGTCATGACGAGTGCAGCAGCTGCCAGGAAGGAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATCCCACGCAGCAGCTaGAGTCCTTCCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLIPRSS*SPSWQL
Trigger: CAGCTGCCAGGAAGGACTGCAGCTGCTGCGTGGGAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGGGTCTTGGTGGCATaGACGCACATCCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLWVLVA*THIPRS
Trigger: GCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACACCTTCGTCGCTCCTaGAGCAGGCTCTTCACCACA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHLRRS*SRLFTT
Trigger: TGTGGTGAAGAGCCTGCTGCAGGAGCGACGAAGGTG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGGCACACTCCGTGGTaGAGGACGTGGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLWHTPW*RTWPPS
Trigger: TGAAGGAGGCCACGTCCTGCACCACGGAGTGTGCCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCCTTCACAGCCACGTaGCTCTCGGGGCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPFTAT*LSGQFS
Trigger: GGAAAACTGCCCCGAGAGGCACGTGGCTGTGAAGGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATGGCACATATCATCGTaGAGGAAGAACTCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTWHISS*RKNSGV
Trigger: CACGCCTGAGTTCTTCCTGCACGATGATATGTGCCA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCACAGTGGCGCGAGTCTaGATAGAAGCCACGGGGACA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTTVARV*IEATGT
Trigger: TGTCCCCGTGGCTTCTATGCAGACTCGCGCCACTGT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACGTAATATCCTTCCCTaGACTGGAGCAGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTRNILP*TGAGTL
Trigger: AAGAGTGCCTGCTCCAGTGCAGGGAAGGATATTACG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCTTGCAGCTCCTGTTaGACCTCTCACACCGGCCAG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPCSSC*TSHTGQ
Trigger: CTGGCCGGTGTGAGAGGTGCAACAGGAGCTGCAAGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCACACTACCACAGCTaGCCCGAGCAGAAGCACCAG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPHYHS*PEQKHQ
Trigger: CTGGTGCTTCTGCTCGGGGCAGCTGTGGTAGTGTGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTCATAGCCGGCCTTTaGTGCTGGCTGGACTCGGCC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLFIAGL*CWLDSA
Trigger: GGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACGGGCTCAAGTGATTTaGCTGCCTCAGCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTRAQVI*LPQPPE
Trigger: CTCAGGAGGCTGAGGCAGGCAAATCACTTGAGCCCG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCACCCAGGCTGGAGTaGAATGGTGCCATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSPRLE*NGAISA
Trigger: AGCGGAGATGGCACCATTGCACTCCAGCCTGGGTGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAAGATCACAGCTCACTaGAGCCTCGACCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTKITAH*SLDLPG
Trigger: ACCCGGGAGGTCGAGGCTGCAGTGAGCTGTGATCTT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAGATCACAGCTCACTaGAGCCTCGACCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKITAH*SLDLPG
Trigger: ACCCGGGAGGTCGAGGCTGCAGTGAGCTGTGATCTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCTTTACCACTTGCTGTTaGATCCATTCCACCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QHLLSKALRSMKPARWLVFTTCC*IHSTFG
Trigger: ACCAAAGGTGGAATGGATCCAACAGCAAGTGGTAAA...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCATCTGTCCAATCATAACGAGGCATTaGGTCCAAGTCATTCCCATT +
Preference number: 4 (lower is better)
Translates to: SWISLSSSMYLCILSICPIITRH*VQVIPI
Trigger: AATGGGAATGACTTGGACCCAATGCCTCGTTATGAT...TGGACAGATGGACAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCTGACGTCCCAGTGTaGTTGTCCGTGCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLADVPV*LSVQRC
Trigger: GCAGCGTTGCACGGACAACCACACTGGGACGTCAGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGCTGCCGGGGAACGGTaGTCCACTTCTCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRAAGER*STSLPP
Trigger: TGGAGGCAGAGAAGTGGACCACCGTTCCCCGGCAGC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCTCCTCTCCTGGGGTaGGTGATGGTGATGCGCACA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSPLLG*VMVMRT
Trigger: TGTGCGCATCACCATCACCCACCCCAGGAGAGGAGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCGAGGTCAGGTAGATaGCCAGGTCTCCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLARSGR*PGLLSW
Trigger: CCAGGAGAGGAGACCTGGCCATCTACCTGACCTCGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGCAGGACTCACAGTTaGGGGCACACTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSRTHS*GHTSCS
Trigger: GCTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAGCAGGACTCACAGTTaGGGGCACACTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSRTHS*GHTSCS
Trigger: GCTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAATGCATTGGTCACCATaGCTCCCAAAGCAGGACTCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTMHWSP*LPKQDS
Trigger: TGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCAT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACAGGGCTGGCAGTCCTaGCCGTTGAAATACCGTCCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTQGWQS*PLKYRP
Trigger: TGGACGGTATTTCAACGGCCAGGACTGCCAGCCCTG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCAAGCAAAGAAATCTAAGATaGCTGCTCAGCCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: PSGPVFCHFPQWWTQACKQRNLR*LLSLEM
Trigger: CATTTCAAGGCTGAGCAGCCATCTTAGATTTCTTTG...CTTGCATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCAGAGCAATCCCATTTaGCGAACTGCGTGTAAAATA +
Preference number: 4 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMQSNPI*RTACKI
Trigger: TATTTTACACGCAGTTCGCCAAATGGGATTGCTCTG...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AGGATAGTCCATGTTGATAGTATTCCTCTCCTCAGCTGTGACTCCAGCAGCATCAGCCTGCAAGATGGCTaGTCACTTGTAAAGCAAATG +
Preference number: 4 (lower is better)
Translates to: RIVHVDSIPLLSCDSSSISLQDG*SLVKQM
Trigger: CATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCT...GATGCTGCTGGAGTCACAGCTGAGGAGAGGAATACTATCAACATGGACTATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR CCA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTATGAAGCCTGCAAGATaGCTGGTCACTTGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLSKALRSMKPARWLVTCMKPAR*LVTCKA
Trigger: TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCAT...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR CCA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAAGCTTGCTGTTTGGATaGGGACCTCAGCATCTACTT +
Preference number: 4 (lower is better)
Translates to: LSKALRSMKPARWLVTCKSLLFG*GPQHLL
Trigger: AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCT...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTGGTCCCTGGCACTTaGCACATGAGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLVPGT*HMRPHR
Trigger: CCTGTGAGGCCTCATGTGCCAAGTGCCAGGGACCAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCAGTCTTCCTGGGTTaGTCCCTGGCACTTGGCACA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTAVFLG*SLALGT
Trigger: TGTGCCAAGTGCCAGGGACCAACCCAGGAAGACTGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTAGGGCCACTTCCTTaGCATCTCTGGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVGPLP*HLWQVW
Trigger: CCACACCTGCCAGAGATGCCAAGGAAGTGGCCCTAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTAGGGCCACTTCCTTaGCATCTCTGGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVGPLP*HLWQVW
Trigger: CCACACCTGCCAGAGATGCCAAGGAAGTGGCCCTAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCACAGGAGGTGCAGTaGGTAGGGCCACTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPQEVQ*VGPLPW
Trigger: CCAAGGAAGTGGCCCTACCCACTGCACCTCCTGTGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGCATAGTGGCCCTCTaGGCAGCTATCTCCACACTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTGIVAL*AAISTL
Trigger: GAGTGTGGAGATAGCTGCCCAGAGGGCCACTATGCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGGTGTTCCCCTCAGTaGCATAGTGGCCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLRCSPQ*HSGPLG
Trigger: GCCCAGAGGGCCACTATGCCACTGAGGGGAACACCT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAACTTCTGGCATGTGTaGTTGGTGGGCGCTATGAAG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTNFWHV*LVGAMK
Trigger: CTTCATAGCGCCCACCAACCACACATGCCAGAAGTT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGGAGGAAGAGAGGGTaGCCCGGCTGCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLWRKRG*PGCIWH
Trigger: ATGCCAGATGCAGCCGGGCCACCCTCTCTTCCTCCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGCCCTCCGGGCACTTaGAGTAGCACCTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSPPGT*SSTCLH
Trigger: ATGAAGGCAGGTGCTACTCCAAGTGCCCGGAGGGCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCGGGGCAGTTTTCCTaGCACACTCCGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSGQFS*HTPWCR
Trigger: CCTGCACCACGGAGTGTGCCAGGAAAACTGCCCCGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTGAGCACTTCTCGTTaGCCATGCAGCTCCCACGAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVSTSR*PCSSHE
Trigger: CTCGTGGGAGCTGCATGGCCAACGAGAAGTGCTCAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTGAGCACTTCTCGTTaGCCATGCAGCTCCCACGAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVSTSR*PCSSHE
Trigger: CTCGTGGGAGCTGCATGGCCAACGAGAAGTGCTCAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATATCCTTCCCTGCACTaGAGCAGGCACTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTYPSLH*SRHSFP
Trigger: AGGAAAAGAGTGCCTGCTCCAGTGCAGGGAAGGATA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGTGCAGCACCAGGTTaGCAGGGCACAAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTCAAPG*QGTRCS
Trigger: ACTGCACCTTGTGCCCTGCCAACCTGGTGCTGCACA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACAGCAGTGGAGGCAGTaGCTGTCGTCCATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLQQWRQ*LSSMCS
Trigger: GCTGCACATGGACGACAGCCACTGCCTCCACTGCTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGATGCATTCGTCCGTaGTGTCCTGGCAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGCIRP*CPGSHS
Trigger: GCTGTGACTGCCAGGACACCACGGACGAATGCATCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGCCTTTGCTGCTGGCTaGACTCGGCCACGAGATTTC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTAFAAG*TRPRDF
Trigger: GAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACGCGAGGATTCTGAGTaGCAATGGCAGCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTREDSE*QWQQLL
Trigger: CAGGAGCTGCTGCCATTGCCACTCAGAATCCTCGCG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545128.5
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGGAGGAACTAGGGCCTaGGGTGACCTCATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLGGTRA*GDLMAP
Trigger: AGGAGCCATGAGGTCACCCCAGGCCCTAGTTCCTCC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTTCTGCTCGAGATAACTaGCCTTTTAATCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCSARDN*PFNRPA
Trigger: AGCAGGACGATTAAAAGGTCAGTTATCTCGAGCAGA...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACACCTTTGGTTCCATTaGAATGAAACTGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTHLWFH*NETVGP
Trigger: GGGACCCACAGTTTCATTTCAATGGAACCAAAGGTG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCGTGCTCCAGGTAGTTaGCATGGCGGTTGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTRAPGS*HGGWGY
Trigger: ATAACCCCAACCGCCATGTCAACTACCTGGAGCACG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTCTGTTGGCCAAAAGCTaGGACCTAGTTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVLLAKS*DLVPEG
Trigger: GCCCTCTGGAACTAGGTCTCAGCTTTTGGCCAACAG...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAATCCTTCCATGGAGTaGTCAAATAGCCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTNPSME*SNSLLA
Trigger: GGCCAACAGGCTATTTGATCACTCCATGGAAGGATT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATGACCCATCAGGGCAGTaGGTAACACAGCTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYDPSGQ*VTQLLV
Trigger: AACCAACAGCTGTGTTACTCACTGCCCTGATGGGTC...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGCAGTCCTGGCCGTTaGAATACCGTCCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGSPGR*NTVHLH
Trigger: GTGAAGATGGACGGTATTTCAACGGCCAGGACTGCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGTCAAAGTAATAGCTaGTACTACAGCTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGQSNS*YYSSAR
Trigger: GCGTGCAGAGCTGTAGTATCAGCTATTACTTTGACC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGTTGGTGGGCGCTATaGAGTAGCCCTTCATGCATC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTGWWAL*SSPSCI
Trigger: GATGCATGAAGGGCTACTTCATAGCGCCCACCAACC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCACACAGGTTGTGTTaGGAAGAAGGCTGTTCATGG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSHRLC*EEGCSW
Trigger: CCATGAACAGCCTTCTTCTCAACACAACCTGTGTGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGCAGATCCCTCCCATaGGGTGGTAACTCCACACAC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTCRSLP*GGNSTH
Trigger: GTGTGTGGAGTTACCACCTCATGGGAGGGATCTGCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATGCAGATCCCTCCCATaGGGTGGTAACTCCACACAC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTCRSLP*GGNSTH
Trigger: GTGTGTGGAGTTACCACCTCATGGGAGGGATCTGCA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTGTACTCAATCACCTaGTCCTCTTCAAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLYSIT*SSSKLV
Trigger: CACCAGCTTTGAAGAGGATCAGGTGATTGAGTACAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACCTTTAGAATTGTTGTaGCTCTGGATTCCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTPLELL*LWIPAE
Trigger: CTCCGCAGGAATCCAGAGTCACAACAATTCTAAAGG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCCGGCGATTTTGACTaGCCAGTGGTTGGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPGDFD*PVVGVD
Trigger: GTCTACACCAACCACTGGGCAGTCAAAATCGCCGGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAGTGCATATACCACATaGTGGGCCACTTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSAYTT*WATWDH
Trigger: ATGATCCCAAGTGGCCCAGCATGTGGTATATGCACT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATTGTTTGCAGCGGCTaGCACTTCTCCAGCACAGCG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTIVCSG*HFSSTA
Trigger: CGCTGTGCTGGAGAAGTGGCAGCCGCTGCAAACAAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCAGTGCGAATTGTTTaGAGCGGCTGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTAVRIV*SGCHFS
Trigger: GGAGAAGTGGCAGCCGCTGCAAACAATTCGCACTGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGTCCGTCCACAGTCTTaGCATCATCATCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRVRPQS*HHHPGP
Trigger: GGGGCCCGGATGATGATGGCAAGACTGTGGACGGAC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGTGTGGTTGTCCGTaGAACGCTGCCTCAGATCTG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTQCGCP*NAASDL
Trigger: CAGATCTGAGGCAGCGTTGCACGGACAACCACACTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGTGGTCCACTTCTCTaGCTCCATCACCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTGGPLL*LHHHGF
Trigger: GAAGCCATGGTGATGGAGGCAGAGAAGTGGACCACC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGGAAAGTATCCATATTTaGAGGACATGCATTGGTCAC +
Preference number: 4 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMESIHI*RTCIGH
Trigger: GTGACCAATGCATGTCCTGCAAATATGGATACTTTC...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTCTGGCAGTGGCCATaGTCATCAACATATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVWQWP*SSTYSP
Trigger: TGGAGAATATGTTGATGAGCATGGCCACTGCCAGAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCGGCCATAGTTGTCTaGTCCACAGGAGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSAIVV*STGGAV
Trigger: CACTGCACCTCCTGTGGAGCAGACAACTATGGCCGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTGGATCATCCAAGCTaGATCCCAGACATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLDHPS*IPDILL
Trigger: AAGAAGGATGTCTGGGATGCAGCTTGGATGATCCAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGTGCAGGTTTCGCATaGTCGGTGGCAGGACTCACA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTCAGFA*SVAGLT
Trigger: TGTGAGTCCTGCCACCGAGCATGCGAAACCTGCACA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTCCTTCCTGGCAGCTaGTGCACTCGTCATGACCAG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLVLPGS*CTRHDQ
Trigger: CTGGTCATGACGAGTGCAGCAGCTGCCAGGAAGGAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACAGGCGTGCACTCTTTaGATGTTTTCTCATGGATGC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTQACTL*MFSHGC
Trigger: GCATCCATGAGAAAACATGCAAAGAGTGCACGCCTG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCACTTCTCGTTGGCCATaGAGCTCCCACGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTTSRWP*SSHEGS
Trigger: TGAACCCTCGTGGGAGCTGCATGGCCAACGAGAAGT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAACTTCTCGTTGGCCATaGAGCTCCCACGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTTSRWP*SSHEGS
Trigger: TGAACCCTCGTGGGAGCTGCATGGCCAACGAGAAGT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAGAGCTGTCTTGAAATaGTCAGTTGCAGGCCTAACC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTRAVLK*SVAGLT
Trigger: GGTTAGGCCTGCAACTGAGCATTTCAAGACAGCTCT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATATCATTCCAGAATTTaGCCTCCTCCTGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTYHSRI*PPPGSW
Trigger: CCAAGACCCAGGAGGAGGGCAAATTCTGGAATGATA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545128.5
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTGACTCTGGATTCCTaGGGAGGAACTAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLVTLDS*GGTRAW
Trigger: CCAGGCCCTAGTTCCTCCGCAGGAATCCAGAGTCAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGAGACTACAGACACTTaGCACCATGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTETTDT*HHAWLI
Trigger: AATTAGCCAGGCATGGTGGCAAGTGTCTGTAGTCTC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGATATTCATGTCAGACTaGCAGGGATGTGTATTGTCA +
Preference number: 4 (lower is better)
Translates to: EFQGSWISLSSSMYLCILIFMSD*QGCVLS
Trigger: TGACAATACACATCCCTGCCAGTCTGACATGAATAT...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGCTGACGTCCCAGTGTaGTTGTCCGTGCAACGCTGC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRADVPV*LSVQRC
Trigger: GCAGCGTTGCACGGACAACCACACTGGGACGTCAGC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGGTCAGAAACGGATTaGCTTCCAGGGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTRSETD*LPGPAQ
Trigger: TTGCGCTGGCCCTGGAAGCCAATCCGTTTCTGACCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGCGAGGTCAGGTAGATaGCCAGGTCTCCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRARSGR*PGLLSW
Trigger: CCAGGAGAGGAGACCTGGCCATCTACCTGACCTCGC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATAAACAGTCATTGCAGTaGTCTGGTCCTGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYKQSLQ*SGPGPS
Trigger: TGACGGGCCAGGACCAGACCACTGCAATGACTGTTT...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTTTGCAGGACATGCATTaGTCACCATGGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSLQDMH*SPWLPK
Trigger: CTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAA...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACAGGGCTGGCAGTCCTaGCCGTTGAAATACCGTCCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLQGWQS*PLKYRP
Trigger: TGGACGGTATTTCAACGGCCAGGACTGCCAGCCCTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCCATCTGTCCACACTGTGAAATACCATaGCAAACGACACTAAACACA +
Preference number: 4 (lower is better)
Translates to: SWISLSSSMYLCILSICPHCEIP*QTTLNT
Trigger: TGTGTTTAGTGTCGTTTGCCATGGTATTTCACAGTG...TGGACAGATGGACAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCACAGGTCTGGCAGTaGCCATGCTCATCAACATAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSQVWQ*PCSSTY
Trigger: ATATGTTGATGAGCATGGCCACTGCCAGACCTGTGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCAGTCTTCCTGGGTTaGTCCCTGGCACTTGGCACA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLAVFLG*SLALGT
Trigger: TGTGCCAAGTGCCAGGGACCAACCCAGGAAGACTGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTAGTGCAGTCTTCCTaGGTTGGTCCCTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVVQSS*VGPWHL
Trigger: CAAGTGCCAGGGACCAACCCAGGAAGACTGCACTAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTAGTGCAGTCTTCCTaGGTTGGTCCCTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVVQSS*VGPWHL
Trigger: CAAGTGCCAGGGACCAACCCAGGAAGACTGCACTAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTCTGGCAGGTGTGGTaGCATGGATGGCATTGGTTC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLWQVW*HGWHWF
Trigger: GAACCAATGCCATCCATGCCACCACACCTGCCAGAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAAGCTCACAGTTGTCTaGGCAGGGCAGGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTKLTVV*AGQAGV
Trigger: AACACCTGCCTGCCCTGCCCAGACAACTGTGAGCTT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAGCTCACAGTTGTCTaGGCAGGGCAGGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKLTVV*AGQAGV
Trigger: AACACCTGCCTGCCCTGCCCAGACAACTGTGAGCTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTTTCGCATGCTCGGTaGCAGGACTCACATTCTCCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVSHAR*QDSHSP
Trigger: GGGAGAATGTGAGTCCTGCCACCGAGCATGCGAAAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTTTCGCATGCTCGGTaGCAGGACTCACATTCTCCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVSHAR*QDSHSP
Trigger: GGGAGAATGTGAGTCCTGCCACCGAGCATGCGAAAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAATTTGCCCTCCTCCTaGGTCTTGGTGGCATGCACG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTNLPSS*VLVACT
Trigger: CGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGAAGGCCATGTGCCTTaGGGACAGGAGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTEGHVP*GQEETQ
Trigger: CTGTGTTTCCTCCTGTCCCCAAGGCACATGGCCTTC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCGTGGTGCAGGACGTaGCCTCCTTCACAAGAATGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPWCRT*PPSQEW
Trigger: CCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACGGGGACAGGACTGGTaGCACATATCATCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLRGQDW*HISSCR
Trigger: CCTGCACGATGATATGTGCCACCAGTCCTGTCCCCG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCCAGACAGTCTTTATaGCAGGGGACACAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSRQSL*QGTQWR
Trigger: GCGCCACTGTGTCCCCTGCCATAAAGACTGTCTGGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGCCTTTCTGACAGGTaGTGCAGGTCCCAGATGATG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTGLSDR*CRSQMM
Trigger: CATCATCTGGGACCTGCACCACCTGTCAGAAAGGCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCCGGCCCCATGCAGTaGAAGCACTTAACATGGCAG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLAGPMQ*KHLTWQ
Trigger: CTGCCATGTTAAGTGCTTCCACTGCATGGGGCCGGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACACTCTTTTCCTAGCTaGAACCAGCCCGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLHSFPS*NQPGRQ
Trigger: CTGCCGACCGGGCTGGTTCCAGCTAGGAAAAGAGTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATACATAGTAATGGTCTaGGCAGGAGCGATGACACTC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTYIVMV*AGAMTL
Trigger: GAGTGTCATCGCTCCTGCCCAGACCATTACTATGTA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCAGTTCTTGGCCCCTaGTCCCTTGCATTCCATGCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTAVLGP*SLAFHA
Trigger: TGCATGGAATGCAAGGGACCAGGGGCCAAGAACTGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGGATGCATTCGTCCGTaGTGTCCTGGCAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLGCIRP*CPGSHS
Trigger: GCTGTGACTGCCAGGACACCACGGACGAATGCATCC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCCTTTGCTGCTGGCTaGACTCGGCCACGAGATTTC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLAFAAG*TRPRDF
Trigger: GAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCTGGGGTGACCTCATaGCTCCTCAGCTATGATGCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPGVTS*LLSYDA
Trigger: TGCATCATAGCTGAGGAGCCATGAGGTCACCCCAGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGCAGTGCTGGAAGGCTaGTCAGCAGCTAGAGTACAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTAVLEG*SAARVQ
Trigger: CTGTACTCTAGCTGCTGACCAGCCTTCCAGCACTGC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGGCTCAAGAACAGGTaGTGGGTCAGCAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGLKNR*WVSNPP
Trigger: AGGAGGATTGCTGACCCACCACCTGTTCTTGAGCCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGGCTCAAGAACAGGTaGTGGGTCAGCAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTGLKNR*WVSNPP
Trigger: AGGAGGATTGCTGACCCACCACCTGTTCTTGAGCCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTCCGATCTTGGCGTTaGAAGCAATTCCGACTGTGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLRSWR*KQFRLC
Trigger: GCACAGTCGGAATTGCTTTCAACGCCAAGATCGGAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTTCAACCATGTCCGTaGCATCTCCGTCCAGCATTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLQPCP*HLRPAF
Trigger: GAATGCTGGACGGAGATGTCACGGACATGGTTGAAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGGGTTGAAGCTAACTaGTTTTGCTTCAACCATGTC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGVEAN*FCFNHV
Trigger: GACATGGTTGAAGCAAAATCAGTTAGCTTCAACCCC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTGTTGGCCAAAAGCTaGGACCTAGTTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLLAKS*DLVPEG
Trigger: GCCCTCTGGAACTAGGTCTCAGCTTTTGGCCAACAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAATCTCCCATCCTCCATaGAGTAGCCCTCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTISHPP*SSPLCS
Trigger: ACTGCACAGAGGGCTACTTCATGGAGGATGGGAGAT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTTCTAATAAGCACCATTaGAAAAAGTTGCCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCSNKHH*KKLPGQ
Trigger: TTGGCCGGGCAACTTTTTTCAATGGTGCTTATTAGA...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGAGGAAACACAGGCCTaGGCCAGAAGATATGCACCT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTEETQA*ARRYAP
Trigger: AGGTGCATATCTTCTGGCTCAGGCCTGTGTTTCCTC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCATGGATGCAGTCCTaGCACATCTCTGGGCAATGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSWMQS*HISGQC
Trigger: GCATTGCCCAGAGATGTGTCAGGACTGCATCCATGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCATGGATGCAGTCCTaGCACATCTCTGGGCAATGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSWMQS*HISGQC
Trigger: GCATTGCCCAGAGATGTGTCAGGACTGCATCCATGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCTGTTGGCCAAATCTaGCCCACCACCTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPVGQI*PTTCSC
Trigger: ACAAGAACAGGTGGTGGGTCAGATTTGGCCAACAGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCTGTTGGCCAAATCTaGCCCACCACCTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPVGQI*PTTCSC
Trigger: ACAAGAACAGGTGGTGGGTCAGATTTGGCCAACAGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTATGTTGTCCAAGGCTaGTGTCGAACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTYVVQG*CRTPGL
Trigger: GAGCCCAGGAGTTCGACATCAGCCTTGGACAACATA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTGCAACCACAGAGGTaGGAAAGTCTTCCATTGATA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLQPQR*ESLPLI
Trigger: TATCAATGGAAGACTTTCTCACCTCTGTGGTTGCAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACTTGTTCTCGTTGCTTaGATCATAACGAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLVLVA*IITRHW
Trigger: CCAATGCCTCGTTATGATGCAAGCAACGAGAACAAG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCACAGCGAGTCCCATaGTTGTTCTCGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTAQRVP*LFSLLA
Trigger: TGCAAGCAACGAGAACAAGCATGGGACTCGCTGTGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATTGTTTGCAGCGGCTaGCACTTCTCCAGCACAGCG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLIVCSG*HFSSTA
Trigger: CGCTGTGCTGGAGAAGTGGCAGCCGCTGCAAACAAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACAGTGTGGTTGTCCGTaGAACGCTGCCTCAGATCTG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLQCGCP*NAASDL
Trigger: CAGATCTGAGGCAGCGTTGCACGGACAACCACACTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCATGGCTGCACGGAGGTaGCGTAGAGGACCAAAGACC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRMAARR*RRGPKT
Trigger: GGTCTTTGGTCCTCTACGGCACCTCCGTGCAGCCAT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAGTGCAAACAGTCATTaGAGTGGTCTGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSANSH*SGLVLA
Trigger: GGCCAGGACCAGACCACTGCAATGACTGTTTGCACT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCATTCAGTACATGTCTTaGAGTTTTCACTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: QHLLSKALRSMKPARWLVIQYMS*SFHCIS
Trigger: GGAAATGCAGTGAAAACTGCAAGACATGTACTGAAT...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTGATACTACAGCTCTaGACGCATCTCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLILQL*THLPSS
Trigger: GGAGGATGGGAGATGCGTGCAGAGCTGTAGTATCAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGAAAAGGGTACAATCATaGCACCCATATTCAATTTCC +
Preference number: 4 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMKRVQS*HPYSIS
Trigger: GGAAATTGAATATGGGTGGCATGATTGTACCCTTTT...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCGGCCATAGTTGTCTaGTCCACAGGAGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSAIVV*STGGAV
Trigger: CACTGCACCTCCTGTGGAGCAGACAACTATGGCCGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCTTCATGCATCTTGTaGAGACATGCACGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPSCIL*RHARCG
Trigger: GCCACAGCGTGCATGTCTGCACAAGATGCATGAAGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGTGCAGGTTTCGCATaGTCGGTGGCAGGACTCACA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLCAGFA*SVAGLT
Trigger: TGTGAGTCCTGCCACCGAGCATGCGAAACCTGCACA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAACATATGCCGTCTTCTaGATAAGAGCCCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTTYAVF*IRALRA
Trigger: TGCCCGGAGGGCTCTTATGCAGAAGACGGCATATGT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTCCTTCACATGTTCTaGAAGGAGAGCTACAGCGTT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTFLHMF*KESYSV
Trigger: AACGCTGTAGCTCTCCTTGCAGAACATGTGAAGGAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCTCTGGGCAATGCTTaGATACCCCCTTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSLGNA*IPPSQP
Trigger: TGGCTGTGAAGGGGGTATGCAAGCATTGCCCAGAGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCGGCTTTGGGGCCACTaGACTCCAGACAGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTRLWGH*TPDSLY
Trigger: ATAAAGACTGTCTGGAGTGCAGTGGCCCCAAAGCCG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTCATAATAGGTTCCTaGTGGACACTCCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTFIIGS*WTLLQA
Trigger: TGCTTGGAGGAGTGTCCAGCAGGAACCTATTATGAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTTTCTGACAGGTGGTaGAGGTCCCAGATGATGAGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLSDRW*RSQMMS
Trigger: GCTCATCATCTGGGACCTGCACCACCTGTCAGAAAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTGTTGGTGGGGGAGTaGCTGTTTACTGGTAGTAGG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVLVGE*LFTGSR
Trigger: CCTACTACCAGTAAACAGGCACTCCCCCACCAACAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCTGGAGTGCAATGGTaGCATCTCCGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLAGVQW*HLRSLQ
Trigger: TTGCAGTGAGCGGAGATGGCACCATTGCACTCCAGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATATTGAAATGAAACTGTaGGTCCCTCTGCTCGAGATA +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANIEMKL*VPLLEI
Trigger: TATCTCGAGCAGAGGGACCCACAGTTTCATTTCAAT...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGGTCAGAAACGGATTaGCTTCCAGGGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLRSETD*LPGPAQ
Trigger: TTGCGCTGGCCCTGGAAGCCAATCCGTTTCTGACCT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTCTCCTCTCCTGGGGTaGGTGATGGTGATGCGCACA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRSPLLG*VMVMRT
Trigger: TGTGCGCATCACCATCACCCACCCCAGGAGAGGAGA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAACAGTCATTGCAGTaGTCTGGTCCTGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKQSLQ*SGPGPS
Trigger: TGACGGGCCAGGACCAGACCACTGCAATGACTGTTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGGGCAAAGATTTTTCTTaGTATCCTGATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMGKDFS*YPDMTH
Trigger: ATGGGTCATATCAGGATACCAAGAAAAATCTTTGCC...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCTGGCATCAAATGCTTTaGTCATACAATACTGTCTCT +
Preference number: 4 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSWHQML*SYNTVS
Trigger: AGAGACAGTATTGTATGACCAAAGCATTTGATGCCA...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTTCCCACCATGACAAATaGAATTTCAGATGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LLSKALRSMKPARWLVTCSHHDK*NFRWPL
Trigger: TAAAGGCCATCTGAAATTCCATTTGTCATGGTGGGA...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTGTGGTGGCATGGATaGCATTGGTTCTCAAATTCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVWWHG*HWFSNS
Trigger: TGAATTTGAGAACCAATGCCATCCATGCCACCACAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTCTGGCAGGTGTGGTaGCATGGATGGCATTGGTTC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLWQVW*HGWHWF
Trigger: GAACCAATGCCATCCATGCCACCACACCTGCCAGAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTCCTGACACATCTCTaGGCAATGCTTGCATACCCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVLTHL*AMLAYP
Trigger: GGGGTATGCAAGCATTGCCCAGAGATGTGTCAGGAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCCAGACAGTCTTTATaGCAGGGGACACAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSRQSL*QGTQWR
Trigger: GCGCCACTGTGTCCCCTGCCATAAAGACTGTCTGGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAGGAGTAAGACTTGTTaGGGTCGGCCAGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTRSKTC*GRPVFH
Trigger: ATGAAAAACTGGCCGACCCCAACAAGTCTTACTCCT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTGGAATGGTGGTGTTaGTGGGGGAGTGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVEWWC*WGSACL
Trigger: TAAACAGGCACTCCCCCACCAACACCACCATTCCAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCACCAGGGGTGGCCTaGAGTCAATTGATAAGAGCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSPGVA*SQLIRA
Trigger: GGCTCTTATCAATTGACTCCAGGCCACCCCTGGTGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGGGTTTCACCATGTTaGCTAAGCTGGTATCAAACT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGVSPC*LSWYQT
Trigger: AGTTTGATACCAGCTTAGCCAACATGGTGAAACCCC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTTCTGCAGTGCTGCTaGTGGAGATGGTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFLQCC*WRWCRC
Trigger: GCATCTACACCATCTCCATCAGCAGCACTGCAGAAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTTATCCGAGCAGCCTaGAGCTTTGTAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLVIRAA*SFVDGA
Trigger: CGCTCCATCTACAAAGCTTCAGGCTGCTCGGATAAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCGTGCTCCAGGTAGTTaGCATGGCGGTTGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRRAPGS*HGGWGY
Trigger: ATAACCCCAACCGCCATGTCAACTACCTGGAGCACG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCTGTTGGCCAAAAGCTaGGACCTAGTTCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLLAKS*DLVPEG
Trigger: GCCCTCTGGAACTAGGTCTCAGCTTTTGGCCAACAG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAAAATTCATTGGTTGGTaGATATGGCTGCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALIKFIGW*IWLHGG
Trigger: ACCTCCGTGCAGCCATATTCACCAACCAATGAATTT...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATCTCCCATCCTCCATaGAGTAGCCCTCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLISHPP*SSPLCS
Trigger: ACTGCACAGAGGGCTACTTCATGGAGGATGGGAGAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGCTTGTACAGTTCTTaGATCCTGGGCCATTGCACG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSLYSS*ILGHCT
Trigger: CGTGCAATGGCCCAGGATTCAAGAACTGTACAAGCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGCACCTTTGGGACATaGAGTGCACAGAGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTCTFGT*SAQSCR
Trigger: TCTGCAACTCTGTGCACTTCATGTCCCAAAGGTGCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATATGTTGTCCAAGGCTaGTGTCGAACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLYVVQG*CRTPGL
Trigger: GAGCCCAGGAGTTCGACATCAGCCTTGGACAACATA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCCCGGCGATTTTGACTaGCCAGTGGTTGGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRPGDFD*PVVGVD
Trigger: GTCTACACCAACCACTGGGCAGTCAAAATCGCCGGG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCATTGTTTGCAGCGGCTaGCACTTCTCCAGCACAGCG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRIVCSG*HFSSTA
Trigger: CGCTGTGCTGGAGAAGTGGCAGCCGCTGCAAACAAT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGCAGTGCGAATTGTTTaGAGCGGCTGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRAVRIV*SGCHFS
Trigger: GGAGAAGTGGCAGCCGCTGCAAACAATTCGCACTGC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTAGGAGCAGTGGTCTTTaGTCCTTCCACCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVRSSGL*SFHHFQ
Trigger: CTGGAAATGGTGGAAGGAGCAAAGACCACTGCTCCT...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAGGAGCAGTGGTCTTTaGTCCTTCCACCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTRSSGL*SFHHFQ
Trigger: CTGGAAATGGTGGAAGGAGCAAAGACCACTGCTCCT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGGAGCAGTGGTCTTTaGTCCTTCCACCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTRSSGL*SFHHFQ
Trigger: CTGGAAATGGTGGAAGGAGCAAAGACCACTGCTCCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCAGTGTGGTTGTCCGTaGAACGCTGCCTCAGATCTG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRQCGCP*NAASDL
Trigger: CAGATCTGAGGCAGCGTTGCACGGACAACCACACTG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGGTGGTCCACTTCTCTaGCTCCATCACCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRGGPLL*LHHHGF
Trigger: GAAGCCATGGTGATGGAGGCAGAGAAGTGGACCACC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTAGATGGAGCGCACTaGACTGTTAGGGCGGATTGT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLVDGAH*TVRADC
Trigger: ACAATCCGCCCTAACAGTGCAGTGCGCTCCATCTAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTGCATAATCCTCTGTaGCATAGTCGTCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLHNPL*HSRLWG
Trigger: ACCCCACAGACGACTATGGCACAGAGGATTATGCAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGGGTCGCAGGGACCTaGATAATCCTCTGTGCCATA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLRVAGT*IILCAI
Trigger: TATGGCACAGAGGATTATGCAGGTCCCTGCGACCCT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTTGGTGGACTCAAGCATaGAAGAGCTTTCTATTTCAT +
Preference number: 4 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCWWTQA*KSFLFH
Trigger: ATGAAATAGAAAGCTCTTGCATGCTTGAGTCCACCA...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CACCTGCATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTGTGATTCAATACAATTaGAATGCTATTAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: HLHGQWEMECTLVDPNEFVIQYN*NAIKRV
Trigger: GACCCTCTTAATAGCATTGCAATTGTATTGAATCAC...AAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCATCTTGTGCAGACATaGACGCTGTGGCAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTHLVQT*TLWQSS
Trigger: TGAGCTTTGCCACAGCGTGCATGTCTGCACAAGATG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAATTTCCTCACACAACTaGCACCTAAGAGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTISSHN*HLRERS
Trigger: GCTTCTTTCTCTTAGGTGGCAGTTGTGTGAGGAAAT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTACGGAAGGCCATGTaGCTTGGGGACAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLRKAM*LGDRRK
Trigger: TTTCCTCCTGTCCCCAAGGCACATGGCCTTCCGTAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCTCTGGGCAATGCTTaGATACCCCCTTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSLGNA*IPPSQP
Trigger: TGGCTGTGAAGGGGGTATGCAAGCATTGCCCAGAGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACACATCTCTGGGCAATaGTTGCATACCCCCTTCACA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHISGQ*LHTPFT
Trigger: TGTGAAGGGGGTATGCAAGCATTGCCCAGAGATGTG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGCCAGTGGAGTTGTCTaGGTAATATCCTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTASGVV*VISFPA
Trigger: TGCAGGGAAGGATATTACGCAGACAACTCCACTGGC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAACGCTCCTTTTCCTTTaGATTGATCACAAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTTLLFL*IDHKSD
Trigger: ATCCGACTTGTGATCAATGCAAAGGAAAAGGAGCGT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATGCTTGTTCGAAGGATaGATTCGTCCGTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTCLFEG*IRPWCP
Trigger: AGGACACCACGGACGAATGCATCCTTCGAACAAGCA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATGCTCTCTCTATAGCTaGTCTTATAGGAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTCSLYS*SYRRSK
Trigger: CTTACTCCTCCTATAAGAGCAGCTATAGAGAGAGCA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTTTTGCATCAGATCTaGATGGGTTCTCTCAATTCC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVLHQI*MGSLNS
Trigger: GGAATTGAGAGAACCCATCCAGATCTGATGCAAAAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAATCATAACGAGGCATTaGGTCCAAGTCATTCCCATT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTIITRH*VQVIPI
Trigger: AATGGGAATGACTTGGACCCAATGCCTCGTTATGAT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCATCACAGGAGCAGTaGTCTTTGCTCCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPSQEQ*SLLLPP
Trigger: TGGTGGAAGGAGCAAAGACCACTGCTCCTGTGATGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCAGGTCAGAAACGGATTaGCTTCCAGGGCCAGCGCAA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRRSETD*LPGPAQ
Trigger: TTGCGCTGGCCCTGGAAGCCAATCCGTTTCTGACCT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCTTTCGGAAATTCATTaGTTGGTGAATATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCLSEIH*LVNMAA
Trigger: TGCAGCCATATTCACCAACCAATGAATTTCCGAAAG...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGCCATAGTCGTCTGTaGGGTCTTCAACTCGGCTAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTCHSRL*GLQLGY
Trigger: ATAGCCGAGTTGAAGACCCCACAGACGACTATGGCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAATGGAGACACAGATCCTaGTATTGTTTTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LSKALRSMKPARWLVTCKWRHRS*YCFSAC
Trigger: ACAAGCTGAAAAACAATACCAGGATCTGTGTCTCCA...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAATGCATTGGTCACCATaGCTCCCAAAGCAGGACTCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTMHWSP*LPKQDS
Trigger: TGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCAT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTGCAGGACATGCATTaGTCACCATGGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLQDMH*SPWLPK
Trigger: CTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTGCAGGACATGCATTaGTCACCATGGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLQDMH*SPWLPK
Trigger: CTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CACCTGCATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTAGATTTCATCGTTTCTaGCCACTAATCCAAATAGTT +
Preference number: 4 (lower is better)
Translates to: HLHGQWEMECTLVDPNEFRFHRF*PLIQIV
Trigger: AACTATTTGGATTAGTGGCCAGAAACGATGAAATCT...AAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGCAGGTGTGGTGGCATaGATGGCATTGGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTAGVVA*MALVLK
Trigger: TTTGAGAACCAATGCCATCCATGCCACCACACCTGC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGACATGCACGCTGTaGCAAAGCTCACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTQTCTL*QSSQLS
Trigger: AGACAACTGTGAGCTTTGCCACAGCGTGCATGTCTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAACTTCTGGCATGTGTaGTTGGTGGGCGCTATGAAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTNFWHV*LVGAMK
Trigger: CTTCATAGCGCCCACCAACCACACATGCCAGAAGTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCTCCTTCACAAGAATaGCAGTTGGTGGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPPSQE*QLVAFP
Trigger: AGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATATCCTTCCCTGCACTaGAGCAGGCACTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTYPSLH*SRHSFP
Trigger: AGGAAAAGAGTGCCTGCTCCAGTGCAGGGAAGGATA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCTCACACCGGCCAGTaGAGTTGTCTGCGTAATATC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSHTGQ*SCLRNI
Trigger: GATATTACGCAGACAACTCCACTGGCCGGTGTGAGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCCATGCAGCTCTCGTaGCATTTTTCACAGTTAAAC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSMQLS*HFSQLN
Trigger: GTTTAACTGTGAAAAATGCCACGAGAGCTGCATGGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTGGAATGGTGGTGTTaGTGGGGGAGTGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLVEWWC*WGSACL
Trigger: TAAACAGGCACTCCCCCACCAACACCACCATTCCAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGTGATGAGCAGTGCTaGAAGGCTGGTCAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSDEQC*KAGQQL
Trigger: TAGCTGCTGACCAGCCTTCCAGCACTGCTCATCACT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCAATACCAACCTCATaGGAGTATGGTAAGTACCAA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTAIPTS*EYGKYQ
Trigger: TTGGTACTTACCATACTCCCATGAGGTTGGTATTGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTGGTTCCATTGAAATaGAACTGTGGGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLVPLK*NCGSLC
Trigger: GCAGAGGGACCCACAGTTTCATTTCAATGGAACCAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACACCTTTGGTTCCATTaGAATGAAACTGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHLWFH*NETVGP
Trigger: GGGACCCACAGTTTCATTTCAATGGAACCAAAGGTG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCTCCGATCTTGGCGTTaGAAGCAATTCCGACTGTGC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLRSWR*KQFRLC
Trigger: GCACAGTCGGAATTGCTTTCAACGCCAAGATCGGAG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCTTCAACCATGTCCGTaGCATCTCCGTCCAGCATTC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLQPCP*HLRPAF
Trigger: GAATGCTGGACGGAGATGTCACGGACATGGTTGAAG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGTTATCCGAGCAGCCTaGAGCTTTGTAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRVIRAA*SFVDGA
Trigger: CGCTCCATCTACAAAGCTTCAGGCTGCTCGGATAAC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTCCCATGTGGTGGGATaGTGCATGAGCTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRSHVVG*CMSCLF
Trigger: AAAGAGGCAGCTCATGCATCATCCCACCACATGGGA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGTCAAAGTAATAGCTaGTACTACAGCTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTGQSNS*YYSSAR
Trigger: GCGTGCAGAGCTGTAGTATCAGCTATTACTTTGACC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATACAAATGGCTCCCATTTaGCACATTCCTAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALIQMAPI*HIPKSK
Trigger: CTTAGACTTAGGAATGTGTCAAATGGGAGCCATTTG...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR TCA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTACAAAGTTAACACTCTaGATTTCAGGGGAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSTKLTL*ISGELD
Trigger: ATCCAGCTCCCCTGAAATTCAGAGTGTTAACTTTGT...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGCACCTTTGGGACATaGAGTGCACAGAGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLCTFGT*SAQSCR
Trigger: TCTGCAACTCTGTGCACTTCATGTCCCAAAGGTGCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTGTACTCAATCACCTaGTCCTCTTCAAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLYSIT*SSSKLV
Trigger: CACCAGCTTTGAAGAGGATCAGGTGATTGAGTACAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCTTTAGAATTGTTGTaGCTCTGGATTCCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPLELL*LWIPAE
Trigger: CTCCGCAGGAATCCAGAGTCACAACAATTCTAAAGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGAGTCCACGGTTTTGTaGTGGGTTGTTGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTESTVL*WVVDEG
Trigger: TCCTTCATCAACAACCCATCACAAAACCGTGGACTC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGAGTCCACGGTTTTGTaGTGGGTTGTTGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTESTVL*WVVDEG
Trigger: TCCTTCATCAACAACCCATCACAAAACCGTGGACTC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAGAGCTGAGTGGTTATaGCAGAGACTTTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTRAEWL*QRLSGQ
Trigger: TTGGCCAGAAAGTCTCTGTCATAACCACTCAGCTCT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTGGTATCAAACTCCTaGCTTCAGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLVSNS*LQVICL
Trigger: CAGGCAGATCACCTGAAGTCAGGAGTTTGATACCAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAGTGCATATACCACATaGTGGGCCACTTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSAYTT*WATWDH
Trigger: ATGATCCCAAGTGGCCCAGCATGTGGTATATGCACT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGCACAGCGAGTCCCATaGTTGTTCTCGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRAQRVP*LFSLLA
Trigger: TGCAAGCAACGAGAACAAGCATGGGACTCGCTGTGC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATTCCGACTGTGCAGTaGGAATTGTTTGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLIPTVQ*ELFAAA
Trigger: AGCCGCTGCAAACAATTCGCACTGCACAGTCGGAAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTTCCACCATTTCCAGATaGCCAAACAAACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVSTISR*PNKHRA
Trigger: GGCTCTGTGTTTGTTTGGGCATCTGGAAATGGTGGA...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCCACCATTTCCAGATaGCCAAACAAACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSTISR*PNKHRA
Trigger: GGCTCTGTGTTTGTTTGGGCATCTGGAAATGGTGGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTGTCCGTGCAACGCTaGCTCAGATCTGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLSVQR*LRSVVM
Trigger: CATCACTACAGATCTGAGGCAGCGTTGCACGGACAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTGTCCTGACAATAACATaGTGTACGTCTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVVLTIT*CTSLQV
Trigger: GACCTGGAGAGACGTACAGCATGTTATTGTCAGGAC...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTCCTGACAATAACATaGTGTACGTCTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVLTIT*CTSLQV
Trigger: GACCTGGAGAGACGTACAGCATGTTATTGTCAGGAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTCCTGACAATAACATaGTGTACGTCTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVLTIT*CTSLQV
Trigger: GACCTGGAGAGACGTACAGCATGTTATTGTCAGGAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGTAGATGGAGCGCACTaGACTGTTAGGGCGGATTGT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRVDGAH*TVRADC
Trigger: ACAATCCGCCCTAACAGTGCAGTGCGCTCCATCTAC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGAAAGTATCCATATTTaGAGGACATGCATTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTESIHI*RTCIGH
Trigger: GTGACCAATGCATGTCCTGCAAATATGGATACTTTC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTGGATCATCCAAGCTaGATCCCAGACATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLDHPS*IPDILL
Trigger: AAGAAGGATGTCTGGGATGCAGCTTGGATGATCCAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACATTCTGGTCACAGCTaGCACAGTTACTATCACACG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHSGHS*HSYYHT
Trigger: CGTGTGATAGTAACTGTGGCAGCTGTGACCAGAATG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTTCATTCCAGAATTTaGCCTCCTCCTGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLHSRI*PPPGSW
Trigger: CCAAGACCCAGGAGGAGGGCAAATTCTGGAATGAAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGGCGTGCACTCTTTaGATGTTTTCTCATGGATGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTQACTL*MFSHGC
Trigger: GCATCCATGAGAAAACATGCAAAGAGTGCACGCCTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGGCACATATCATCGTaGAGGAAGAACTCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLWHISS*RKNSGV
Trigger: CACGCCTGAGTTCTTCCTGCACGATGATATGTGCCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACGTAATATCCTTCCCTaGACTGGAGCAGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLRNILP*TGAGTL
Trigger: AAGAGTGCCTGCTCCAGTGCAGGGAAGGATATTACG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCCAGTGGAGTTGTCTaGGTAATATCCTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLASGVV*VISFPA
Trigger: TGCAGGGAAGGATATTACGCAGACAACTCCACTGGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTCCCTTGCATTCCATaGAGCTCTCGTGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVPCIP*SSRGIF
Trigger: AAAAATGCCACGAGAGCTGCATGGAATGCAAGGGAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGCTTGTTCGAAGGATaGATTCGTCCGTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLCLFEG*IRPWCP
Trigger: AGGACACCACGGACGAATGCATCCTTCGAACAAGCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCTCTTCAAAGCTGGTaGTCTCTCTATAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPLQSW*SLYSCS
Trigger: AGAGCAGCTATAGAGAGAGCACCAGCTTTGAAGAGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAACAGAGAAACATCCTTaGAAATGGCTCCCATTTGAC +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALITEKHP*KWLPFD
Trigger: GTCAAATGGGAGCCATTTGCAAGGATGTTTCTCTGT...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455778.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACCGTTATGTACCAGCTaGATTCATGCTATAATAGCA +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTPLCTS*IHAIIA
Trigger: TGCTATTATAGCATGAATGCAGCTGGTACATAACGG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGAGACTACAGACACTTaGCACCATGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTETTDT*HHAWLI
Trigger: AATTAGCCAGGCATGGTGGCAAGTGTCTGTAGTCTC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGAGCCTTCTTTTCATTaGAGGCCACACAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTEPSFH*RPHRGT
Trigger: TGTTCCTCTGTGTGGCCTGCAATGAAAAGAAGGCTC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAACTGGAACCTCCCATaGTTTACCCAGCCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTNWNLP*FTQPFG
Trigger: ACCAAAAGGCTGGGTAAAGCATGGGAGGTTCCAGTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTGCATCAGATCTGGATaGGTTCTCTCAATTCCGTCA +
Preference number: 4 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYCIRSG*VLSIPS
Trigger: TGACGGAATTGAGAGAACCCATCCAGATCTGATGCA...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCCATCACAGGAGCAGTaGTCTTTGCTCCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRPSQEQ*SLLLPP
Trigger: TGGTGGAAGGAGCAAAGACCACTGCTCCTGTGATGG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGCCATAGTCGTCTGTaGGGTCTTCAACTCGGCTAT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLCHSRL*GLQLGY
Trigger: ATAGCCGAGTTGAAGACCCCACAGACGACTATGGCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATGGAGACACAGATCCTaGTATTGTTTTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTWRHRS*YCFSAC
Trigger: ACAAGCTGAAAAACAATACCAGGATCTGTGTCTCCA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAAAATACAGGACCTCTTaGGAACTTTTGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ARWLVTCKANEVTNEALIKYRTS*ELLTPG
Trigger: TCCTGGAGTCAAAAGTTCCCAAGAGGTCCTGTATTT...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCACAGGTCTGGCAGTaGCCATGCTCATCAACATAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSQVWQ*PCSSTY
Trigger: ATATGTTGATGAGCATGGCCACTGCCAGACCTGTGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGCAGGTGTGGTGGCATaGATGGCATTGGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLAGVVA*MALVLK
Trigger: TTTGAGAACCAATGCCATCCATGCCACCACACCTGC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACAGACATGCACGCTGTaGCAAAGCTCACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLQTCTL*QSSQLS
Trigger: AGACAACTGTGAGCTTTGCCACAGCGTGCATGTCTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCACAAGAATGGCAGTTaGTGGCGTTTCCTTCACATG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTHKNGS*WRFLHM
Trigger: CATGTGAAGGAAACGCCACCAACTGCCATTCTTGTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCTCCTTCACAAGAATaGCAGTTGGTGGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPPSQE*QLVAFP
Trigger: AGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAATAATAGGTTCCTGCTaGACACTCCTCCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTIIGSC*TLLQAQ
Trigger: CTGTGCTTGGAGGAGTGTCCAGCAGGAACCTATTAT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATAATAGGTTCCTGCTaGACACTCCTCCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTIIGSC*TLLQAQ
Trigger: CTGTGCTTGGAGGAGTGTCCAGCAGGAACCTATTAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTCAAGCAGGACTTGTaGCAATCTCTGCACTCCTTA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVKQDL*QSLHSL
Trigger: TAAGGAGTGCAGAGATTGCCACAAGTCCTGCTTGAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGAAGAAGGCTGTTCATaGGGCATGTTTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTEEGCS*GMFDTG
Trigger: ACCAGTGTCAAACATGCCCCATGAACAGCCTTCTTC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGAAGAAGGCTGTTCATaGGGCATGTTTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTEEGCS*GMFDTG
Trigger: ACCAGTGTCAAACATGCCCCATGAACAGCCTTCTTC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCTCACACCGGCCAGTaGAGTTGTCTGCGTAATATC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSHTGQ*SCLRNI
Trigger: GATATTACGCAGACAACTCCACTGGCCGGTGTGAGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGATCCTCTTCAAAGCTaGTGCTCTCTCTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTDPLQS*CSLYSC
Trigger: GCAGCTATAGAGAGAGCACCAGCTTTGAAGAGGATC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCTGCTCGAGATAACTaGCCTTTTAATCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSARDN*PFNRPA
Trigger: AGCAGGACGATTAAAAGGTCAGTTATCTCGAGCAGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTGGTTCCATTGAAATaGAACTGTGGGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLVPLK*NCGSLC
Trigger: GCAGAGGGACCCACAGTTTCATTTCAATGGAACCAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTGGGGTTGAAGCTAACTaGTTTTGCTTCAACCATGTC +
Preference number: 4 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVGVEAN*FCFNHV
Trigger: GACATGGTTGAAGCAAAATCAGTTAGCTTCAACCCC...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGGGTTGAAGCTAACTaGTTTTGCTTCAACCATGTC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGVEAN*FCFNHV
Trigger: GACATGGTTGAAGCAAAATCAGTTAGCTTCAACCCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTTTCTGCAGTGCTGCTaGTGGAGATGGTGTAGATGC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRFLQCC*WRWCRC
Trigger: GCATCTACACCATCTCCATCAGCAGCACTGCAGAAA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAATCCTTCCATGGAGTaGTCAAATAGCCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLNPSME*SNSLLA
Trigger: GGCCAACAGGCTATTTGATCACTCCATGGAAGGATT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAATTCATTGGTTGGTaGATATGGCTGCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKFIGW*IWLHGG
Trigger: ACCTCCGTGCAGCCATATTCACCAACCAATGAATTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTTTTCTTGGTATCCTaGTATGACCCATCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFFLVS*YDPSGQ
Trigger: CTGCCCTGATGGGTCATATCAGGATACCAAGAAAAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCTTTTCCTTTGCATTaGTCACAAGTCGGATGGCAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPFPLH*SQVGWH
Trigger: ATGCCATCCGACTTGTGATCAATGCAAAGGAAAAGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATTCGATGTCTTAGCTaGTGTCTCCCAGGCGAAAAG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLIRCLS*CLPGEK
Trigger: CTTTTCGCCTGGGAGACATCAGCTAAGACATCGAAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTCTGTCATTCAGGCTaGAGTGCAATAGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLCHSG*SAIARS
Trigger: TGATCTTGCTATTGCACTTCAGCCTGAATGACAGAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTCTGTCATTCAGGCTaGAGTGCAATAGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLCHSG*SAIARS
Trigger: TGATCTTGCTATTGCACTTCAGCCTGAATGACAGAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTGCAACCACAGAGGTaGGAAAGTCTTCCATTGATA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLQPQR*ESLPLI
Trigger: TATCAATGGAAGACTTTCTCACCTCTGTGGTTGCAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACATGCTTGTTCTCGTTaGTTGCATCATAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHACSR*LHHNEA
Trigger: TGCCTCGTTATGATGCAAGCAACGAGAACAAGCATG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCATTCCGACTGTGCAGTaGGAATTGTTTGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRIPTVQ*ELFAAA
Trigger: AGCCGCTGCAAACAATTCGCACTGCACAGTCGGAAT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCCACCATTTCCAGATaGCCAAACAAACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSTISR*PNKHRA
Trigger: GGCTCTGTGTTTGTTTGGGCATCTGGAAATGGTGGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCAGGAGCAGTGGTCTTTaGTCCTTCCACCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRRSSGL*SFHHFQ
Trigger: CTGGAAATGGTGGAAGGAGCAAAGACCACTGCTCCT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTTGTCCGTGCAACGCTaGCTCAGATCTGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLSVQR*LRSVVM
Trigger: CATCACTACAGATCTGAGGCAGCGTTGCACGGACAA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCTGCATAATCCTCTGTaGCATAGTCGTCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLHNPL*HSRLWG
Trigger: ACCCCACAGACGACTATGGCACAGAGGATTATGCAG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGGAAGCCAGCTCACCTaGATAATCCTCTGTGCCATA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRGSQLT*IILCAI
Trigger: TATGGCACAGAGGATTATGCAGGTGAGCTGGCTTCC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATATTTTTGTCTATGTATaGTCTCGCGATGTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KALRSMKPARWLVTCKANIFVYV*SRDVLE
Trigger: TTCCAAAACATCGCGAGAGCATACATAGACAAAAAT...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTCTGGCAGTGGCCATaGTCATCAACATATTCTCCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLVWQWP*SSTYSP
Trigger: TGGAGAATATGTTGATGAGCATGGCCACTGCCAGAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTACTATCACACGCCTTaGATTCCACTTCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTYYHTP*IPLPHC
Trigger: ACAGTGAGGAAGTGGAATGCAAGGCGTGTGATAGTA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACATTCTGGTCACAGCTaGCACAGTTACTATCACACG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLHSGHS*HSYYHT
Trigger: CGTGTGATAGTAACTGTGGCAGCTGTGACCAGAATG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGAGTTGCAGATCCATTaGAGGTTTTACAAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTELQIH*RFYKKN
Trigger: ATTCTTCTTGTAAAACCTGCAATGGATCTGCAACTC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATACAGCGTTCACATATaGCGTCTTCTGCATAAGAGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTYSVHI*RLLHKS
Trigger: GCTCTTATGCAGAAGACGGCATATGTGAACGCTGTA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTCCTTCACATGTTCTaGAAGGAGAGCTACAGCGTT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTFLHMF*KESYSV
Trigger: AACGCTGTAGCTCTCCTTGCAGAACATGTGAAGGAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTCATAATAGGTTCCTaGTGGACACTCCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFIIGS*WTLLQA
Trigger: TGCTTGGAGGAGTGTCCAGCAGGAACCTATTATGAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTCCCTTGCATTCCATaGAGCTCTCGTGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLVPCIP*SSRGIF
Trigger: AAAAATGCCACGAGAGCTGCATGGAATGCAAGGGAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTTGAAATGCTCAGTTaGAGGCCTAACCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLEMLS*RPNLAC
Trigger: ACAAGCAAGGTTAGGCCTGCAACTGAGCATTTCAAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTTTCTCGCTGGGCTTaGTCTGCCTTTAGAATTGTT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLSRWA*SAFRIV
Trigger: AACAATTCTAAAGGCAGAGCAAGCCCAGCGAGAAAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGAGCCTTCTTTTCATTaGAGGCCACACAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLEPSFH*RPHRGT
Trigger: TGTTCCTCTGTGTGGCCTGCAATGAAAAGAAGGCTC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAACTGGAACCTCCCATaGTTTACCCAGCCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLNWNLP*FTQPFG
Trigger: ACCAAAAGGCTGGGTAAAGCATGGGAGGTTCCAGTT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATGCATCAGATCTGGATaGGTTCTCTCAATTCCGTCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTCIRSG*VLSIPS
Trigger: TGACGGAATTGAGAGAACCCATCCAGATCTGATGCA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTGCCATAGTCGTCTGTaGGGTCTTCAACTCGGCTAT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRCHSRL*GLQLGY
Trigger: ATAGCCGAGTTGAAGACCCCACAGACGACTATGGCA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGCAAAGATTTTTCTTaGTATCCTGATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGKDFS*YPDMTH
Trigger: ATGGGTCATATCAGGATACCAAGAAAAATCTTTGCC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGCATTCTGTACAGTTATaGAATTCAGTACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: PARWLVTCKANEVTNEALHSVQL*NSVHVL
Trigger: CAAGACATGTACTGAATTCCATAACTGTACAGAATG...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCACAGTTCTTGAATCCTaGGCCATTGCACGTCAAACA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTTVLES*AIARQT
Trigger: TGTTTGACGTGCAATGGCCCAGGATTCAAGAACTGT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATACAATACTGTCTCTGTaGTTCTGGCTGTTTAGCACT +
Preference number: 4 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYTILSL*FWLFST
Trigger: AGTGCTAAACAGCCAGAACCACAGAGACAGTATTGT...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTCCATCCTTGCAAATaGCTCCCATTTGACACATTC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLHPCK*LPFDTF
Trigger: GAATGTGTCAAATGGGAGCCATTTGCAAGGATGGAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTCCATCCTTGCAAATaGCTCCCATTTGACACATTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLHPCK*LPFDTF
Trigger: GAATGTGTCAAATGGGAGCCATTTGCAAGGATGGAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTGTGGTGGCATGGATaGCATTGGTTCTCAAATTCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVWWHG*HWFSNS
Trigger: TGAATTTGAGAACCAATGCCATCCATGCCACCACAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAGATGTACATGTTCCTaGATCATCCAAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTRCTCS*IIQAAS
Trigger: GGATGCAGCTTGGATGATCCAGGAACATGTACATCT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGAAGATATGCACCTTTaGGACATGAAGTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTEDMHL*DMKCTE
Trigger: CTCTGTGCACTTCATGTCCCAAAGGTGCATATCTTC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAAGAATGGCAGTTGGTaGCGTTTCCTTCACATGTTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTKNGSW*RFLHMF
Trigger: GAACATGTGAAGGAAACGCCACCAACTGCCATTCTT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAGAATGGCAGTTGGTaGCGTTTCCTTCACATGTTC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKNGSW*RFLHMF
Trigger: GAACATGTGAAGGAAACGCCACCAACTGCCATTCTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACACAAGAATGGCAGTTaGTGGCGTTTCCTTCACATG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLHKNGS*WRFLHM
Trigger: CATGTGAAGGAAACGCCACCAACTGCCATTCTTGTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATACATAGTAATGGTCTaGGCAGGAGCGATGACACTC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLYIVMV*AGAMTL
Trigger: GAGTGTCATCGCTCCTGCCCAGACCATTACTATGTA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGGAGTAAGACTTGTTaGGGTCGGCCAGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTRSKTC*GRPVFH
Trigger: ATGAAAAACTGGCCGACCCCAACAAGTCTTACTCCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGATCCTCTTCAAAGCTaGTGCTCTCTCTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLDPLQS*CSLYSC
Trigger: GCAGCTATAGAGAGAGCACCAGCTTTGAAGAGGATC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCACTCACACATCAGCCTaGTGTGGGGATAAAACCAAA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTTHTSA*CGDKTK
Trigger: TTTGGTTTTATCCCCACACCAGGCTGATGTGTGAGT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCATGTTGGCTAAGCTaGTATCAAACTCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPCWLS*YQTPDF
Trigger: GAAGTCAGGAGTTTGATACCAGCTTAGCCAACATGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCATGTTGGCTAAGCTaGTATCAAACTCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPCWLS*YQTPDF
Trigger: GAAGTCAGGAGTTTGATACCAGCTTAGCCAACATGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGGGTTTCACCATGTTaGCTAAGCTGGTATCAAACT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTGVSPC*LSWYQT
Trigger: AGTTTGATACCAGCTTAGCCAACATGGTGAAACCCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCTGCTCGAGATAACTaGCCTTTTAATCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLSARDN*PFNRPA
Trigger: AGCAGGACGATTAAAAGGTCAGTTATCTCGAGCAGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTTGGTTCCATTGAAATaGAACTGTGGGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLVPLK*NCGSLC
Trigger: GCAGAGGGACCCACAGTTTCATTTCAATGGAACCAA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCACCTTTGGTTCCATTaGAATGAAACTGTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRHLWFH*NETVGP
Trigger: GGGACCCACAGTTTCATTTCAATGGAACCAAAGGTG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCAATCCTTCCATGGAGTaGTCAAATAGCCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRNPSME*SNSLLA
Trigger: GGCCAACAGGCTATTTGATCACTCCATGGAAGGATT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAAATTCATTGGTTGGTaGATATGGCTGCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLKFIGW*IWLHGG
Trigger: ACCTCCGTGCAGCCATATTCACCAACCAATGAATTT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTTTTCTTGGTATCCTaGTATGACCCATCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLFFLVS*YDPSGQ
Trigger: CTGCCCTGATGGGTCATATCAGGATACCAAGAAAAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACAAATGGCTCCCATTTaGCACATTCCTAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTQMAPI*HIPKSK
Trigger: CTTAGACTTAGGAATGTGTCAAATGGGAGCCATTTG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAAATGGCTCCCATTTaGCACATTCCTAAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTQMAPI*HIPKSK
Trigger: CTTAGACTTAGGAATGTGTCAAATGGGAGCCATTTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATAAATGCTTCCCACCATaGCAAATGGAATTTCAGATG +
Preference number: 4 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYKCFPP*QMEFQM
Trigger: CATCTGAAATTCCATTTGTCATGGTGGGAAGCATTT...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCTTTTCCTTTGCATTaGTCACAAGTCGGATGGCAT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLPFPLH*SQVGWH
Trigger: ATGCCATCCGACTTGTGATCAATGCAAAGGAAAAGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATGGCTCCTCAGCTATaGTGCACCTTCTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLMAPQL*CTFSFL
Trigger: AAGAAAAGAGAAGGTGCATCATAGCTGAGGAGCCAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTGTTGAGCTTTGCATaGCCTTGGACTAGTTACCTA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLLSFA*PWTSYL
Trigger: TAGGTAACTAGTCCAAGGTCATGCAAAGCTCAACAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTCAATACACAAGCATaGGCCTTCTTTTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLNTQA*AFFSLQ
Trigger: CTGCAATGAAAAGAAGGCTCATGCTTGTGTATTGAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCAGTGCATATACCACATaGTGGGCCACTTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRSAYTT*WATWDH
Trigger: ATGATCCCAAGTGGCCCAGCATGTGGTATATGCACT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTTGTTCTCGTTGCTTaGATCATAACGAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLVLVA*IITRHW
Trigger: CCAATGCCTCGTTATGATGCAAGCAACGAGAACAAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACATGCTTGTTCTCGTTaGTTGCATCATAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLHACSR*LHHNEA
Trigger: TGCCTCGTTATGATGCAAGCAACGAGAACAAGCATG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAAGCAATTCCGACTGTaGAGTGCGAATTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLKQFRL*SANCLQ
Trigger: CTGCAAACAATTCGCACTGCACAGTCGGAATTGCTT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTCCACCATTTCCAGATaGCCAAACAAACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRSTISR*PNKHRA
Trigger: GGCTCTGTGTTTGTTTGGGCATCTGGAAATGGTGGA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGTCCTGACAATAACATaGTGTACGTCTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRVLTIT*CTSLQV
Trigger: GACCTGGAGAGACGTACAGCATGTTATTGTCAGGAC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTATCACAGTAACCTCGTaGCTCAAATATTATGGGCTG +
Preference number: 4 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVITVTS*LKYYGL
Trigger: CAGCCCATAATATTTGAGGCACGAGGTTACTGTGAT...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACATATTCTCCATCCTTaGAAATGGCTCCCATTTGAC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHILHP*KWLPFD
Trigger: GTCAAATGGGAGCCATTTGCAAGGATGGAGAATATG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCATATTCTCCATCCTTaGAAATGGCTCCCATTTGAC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTHILHP*KWLPFD
Trigger: GTCAAATGGGAGCCATTTGCAAGGATGGAGAATATG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATTTCCTCACACAACTaGCACCTAAGAGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTISSHN*HLRERS
Trigger: GCTTCTTTCTCTTAGGTGGCAGTTGTGTGAGGAAAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATACAGCGTTCACATATaGCGTCTTCTGCATAAGAGC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLYSVHI*RLLHKS
Trigger: GCTCTTATGCAGAAGACGGCATATGTGAACGCTGTA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCACGCTCCTTTTCCTTTaGATTGATCACAAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTTLLFL*IDHKSD
Trigger: ATCCGACTTGTGATCAATGCAAAGGAAAAGGAGCGT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATGCTCTCTCTATAGCTaGTCTTATAGGAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTCSLYS*SYRRSK
Trigger: CTTACTCCTCCTATAAGAGCAGCTATAGAGAGAGCA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACAGACACCTCCACAATaGAGCTCGGAAACAGAATTT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLQTPPQ*SSETEF
Trigger: AAATTCTGTTTCCGAGCTGCATTGTGGAGGTGTCTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTGCCAACATCATTTTaGATAGCAAGAGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLPTSF*IARALL
Trigger: GAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTTACCACTTGCTGTTaGATCCATTCCACCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFTTCC*IHSTFG
Trigger: ACCAAAGGTGGAATGGATCCAACAGCAAGTGGTAAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGCATCAGATCTGGATaGGTTCTCTCAATTCCGTCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLCIRSG*VLSIPS
Trigger: TGACGGAATTGAGAGAACCCATCCAGATCTGATGCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAACAGTTCTTGAATCCTaGGCCATTGCACGTCAAACA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLTVLES*AIARQT
Trigger: TGTTTGACGTGCAATGGCCCAGGATTCAAGAACTGT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAACATTCTTCATAGTCTaGGTCTTGGACTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTTFFIV*VLDFTL
Trigger: CAAGGTGAAGTCCAAGACCCAGACTATGAAGAATGT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGATGTACATGTTCCTaGATCATCCAAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLRCTCS*IIQAAS
Trigger: GGATGCAGCTTGGATGATCCAGGAACATGTACATCT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACAGATAGGTTTGCAGTaGACACAGCTTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLQIGLQ*TQLHSR
Trigger: TCTGGAATGAAGCTGTGTCCACTGCAAACCTATCTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAACTCACACATCAGCCTaGTGTGGGGATAAAACCAAA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLTHTSA*CGDKTK
Trigger: TTTGGTTTTATCCCCACACCAGGCTGATGTGTGAGT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACATTCTTACATATTCTaGTTGGACTCATGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: LPTSFCIARALLCVTIWTHSYIF*LDSWLK
Trigger: CTTTAACCATGAGTCCAACCAGAATATGTAAGAATG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTATTTCTTTCTCGCTaGGCTTGCTCTGCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLFLSR*ACSAFR
Trigger: TCTAAAGGCAGAGCAAGCCCAGCGAGAAAGAAATAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGCAATACCAACCTCATaGGAGTATGGTAAGTACCAA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTAIPTS*EYGKYQ
Trigger: TTGGTACTTACCATACTCCCATGAGGTTGGTATTGC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACGGGCTGTCTGCCTGTaGATTTCATTTTTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLRAVCL*ISFLPF
Trigger: AAAAGGCAAAAATGAAATCCACAGGCAGACAGCCCG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTCTGCTCGAGATAACTaGCCTTTTAATCGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRSARDN*PFNRPA
Trigger: AGCAGGACGATTAAAAGGTCAGTTATCTCGAGCAGA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGGGGTTGAAGCTAACTaGTTTTGCTTCAACCATGTC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRGVEAN*FCFNHV
Trigger: GACATGGTTGAAGCAAAATCAGTTAGCTTCAACCCC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCAAATTCATTGGTTGGTaGATATGGCTGCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRKFIGW*IWLHGG
Trigger: ACCTCCGTGCAGCCATATTCACCAACCAATGAATTT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAATATCTCTTTTGATTTaGACTTTCCACCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTISLLI*TFHLRR
Trigger: GCGACGAAGGTGGAAAGTTCAAATCAAAAGAGATAT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTTTTACAAGAAGAATaGCAAGGCTGGAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVLQEE*QGWSFL
Trigger: GAGAAAACTCCAGCCTTGTCATTCTTCTTGTAAAAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTAGAGTACAGCTTGTaGGCAGCATATTGGGATTTT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLEYSL*AAYWDF
Trigger: AAAATCCCAATATGCTGCTCACAAGCTGTACTCTAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTGTTGAGCTTTGCATaGCCTTGGACTAGTTACCTA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLLSFA*PWTSYL
Trigger: TAGGTAACTAGTCCAAGGTCATGCAAAGCTCAACAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTTCTTGTAATGCTGTaGACTGAGAATAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVLVML*TENSFC
Trigger: GCAAAAGCTATTCTCAGTTCACAGCATTACAAGAAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTTCTTGTAATGCTGTaGACTGAGAATAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTVLVML*TENSFC
Trigger: GCAAAAGCTATTCTCAGTTCACAGCATTACAAGAAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGAGAAAGTCTTCCATTaGTATGATGGCTATCATGCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTEKVFH*YDGYHA
Trigger: TGCATGATAGCCATCATATCAATGGAAGACTTTCTC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCTTGTTCTCGTTGCTTaGATCATAACGAGGCATTGG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLVLVA*IITRHW
Trigger: CCAATGCCTCGTTATGATGCAAGCAACGAGAACAAG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCATGCTTGTTCTCGTTaGTTGCATCATAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRHACSR*LHHNEA
Trigger: TGCCTCGTTATGATGCAAGCAACGAGAACAAGCATG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCAAGCAATTCCGACTGTaGAGTGCGAATTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRKQFRL*SANCLQ
Trigger: CTGCAAACAATTCGCACTGCACAGTCGGAATTGCTT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTCTCACAGGTCTGTGTaGTTTGCTCTACATAGTAAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTSHRSV*FALHSN
Trigger: ATTACTATGTAGAGCAAAGCACACAGACCTGTGAGA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCTCACAGGTCTGTGTaGTTTGCTCTACATAGTAAT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSHRSV*FALHSN
Trigger: ATTACTATGTAGAGCAAAGCACACAGACCTGTGAGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCGTTATGTACCAGCTaGATTCATGCTATAATAGCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTPLCTS*IHAIIA
Trigger: TGCTATTATAGCATGAATGCAGCTGGTACATAACGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATTGAAATGAAACTGTaGGTCCCTCTGCTCGAGATA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLIEMKL*VPLLEI
Trigger: TATCTCGAGCAGAGGGACCCACAGTTTCATTTCAAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATATTCATGTCAGACTaGCAGGGATGTGTATTGTCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTIFMSD*QGCVLS
Trigger: TGACAATACACATCCCTGCCAGTCTGACATGAATAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTGCATCAGATCTGGATaGGTTCTCTCAATTCCGTCA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRCIRSG*VLSIPS
Trigger: TGACGGAATTGAGAGAACCCATCCAGATCTGATGCA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTTTTGCATCAGATCTaGATGGGTTCTCTCAATTCC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLVLHQI*MGSLNS
Trigger: GGAATTGAGAGAACCCATCCAGATCTGATGCAAAAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATCATAACGAGGCATTaGGTCCAAGTCATTCCCATT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLIITRH*VQVIPI
Trigger: AATGGGAATGACTTGGACCCAATGCCTCGTTATGAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCTTTCGGAAATTCATTaGTTGGTGAATATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTLSEIH*LVNMAA
Trigger: TGCAGCCATATTCACCAACCAATGAATTTCCGAAAG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTTTCGGAAATTCATTaGTTGGTGAATATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLSEIH*LVNMAA
Trigger: TGCAGCCATATTCACCAACCAATGAATTTCCGAAAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGGAGACACAGATCCTaGTATTGTTTTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTWRHRS*YCFSAC
Trigger: ACAAGCTGAAAAACAATACCAGGATCTGTGTCTCCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTGCTCTCGCGATGTTTTaGAAAGGTATTTTTAGGTGT +
Preference number: 4 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVALAMF*KGIFRC
Trigger: ACACCTAAAAATACCTTTCCAAAACATCGCGAGAGC...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAACATTCTTCATAGTCTaGGTCTTGGACTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLTFFIV*VLDFTL
Trigger: CAAGGTGAAGTCCAAGACCCAGACTATGAAGAATGT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTATTTCTTTCTCGCTaGGCTTGCTCTGCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLFLSR*ACSAFR
Trigger: TCTAAAGGCAGAGCAAGCCCAGCGAGAAAGAAATAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACTCTGTGTTACAATCTaGACAAAAACTGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLCVTI*TKTVLS
Trigger: ACTGAGGACAGTTTTTGTCCAGATTGTAACACAGAG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
3UTR CAA 72 bp GAATTTCAAATGTCAGTGTCCATAAATAAGGTTTTATaGAAGCACAGCTCACCCATCCGTTATGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: EFQMSVSINKVL*KHSSPIRYVPA
Trigger: AGCTGGTACATAACGGATGGGTGAGCTGTGCTTCAATAAAACCTTATTTATGGACACTGACATTTGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAAATTCAAATTTCCATaGGGGGCAGTTCGAAACACA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLKFKFP*GAVRNT
Trigger: TGTGTTTCGAACTGCCCCTCATGGAAATTTGAATTT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTTCTTGAATTTTGTTaGGCTTTGCATGACCTTGGA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFLEFC*ALHDLG
Trigger: TCCAAGGTCATGCAAAGCTCAACAAAATTCAAGAAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGAGAAAGTCTTCCATTaGTATGATGGCTATCATGCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLEKVFH*YDGYHA
Trigger: TGCATGATAGCCATCATATCAATGGAAGACTTTCTC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATTCAGTACATGTCTTaGAGTTTTCACTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTIQYMS*SFHCIS
Trigger: GGAAATGCAGTGAAAACTGCAAGACATGTACTGAAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGGGATTTTTACAATaGTCTTCCATACAATGTCTG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTQGFLQ*SSIQCL
Trigger: CAGACATTGTATGGAAGAGCATTGTAAAAATCCCTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCATTGAAATGAAACTGTaGGTCCCTCTGCTCGAGATA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRIEMKL*VPLLEI
Trigger: TATCTCGAGCAGAGGGACCCACAGTTTCATTTCAAT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTTTACCACTTGCTGTTaGATCCATTCCACCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRFTTCC*IHSTFG
Trigger: ACCAAAGGTGGAATGGATCCAACAGCAAGTGGTAAA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATATTCATGTCAGACTaGCAGGGATGTGTATTGTCA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLIFMSD*QGCVLS
Trigger: TGACAATACACATCCCTGCCAGTCTGACATGAATAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGTTTTGCATCAGATCTaGATGGGTTCTCTCAATTCC +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRVLHQI*MGSLNS
Trigger: GGAATTGAGAGAACCCATCCAGATCTGATGCAAAAC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCATCATAACGAGGCATTaGGTCCAAGTCATTCCCATT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRIITRH*VQVIPI
Trigger: AATGGGAATGACTTGGACCCAATGCCTCGTTATGAT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGCAAAGATTTTTCTTaGTATCCTGATATGACCCAT +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTGKDFS*YPDMTH
Trigger: ATGGGTCATATCAGGATACCAAGAAAAATCTTTGCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGGCATGGATGGCATTaGTTCTCAAATTCAAATTTC +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTWHGWH*FSNSNF
Trigger: GAAATTTGAATTTGAGAACCAATGCCATCCATGCCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACTCTGTGTTACAATCTaGACAAAAACTGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLLCVTI*TKTVLS
Trigger: ACTGAGGACAGTTTTTGTCCAGATTGTAACACAGAG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATGAGCCAGCAGTCCTaGCAAGGAGATAATTTTATT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLMSQQS*QGDNFI
Trigger: AATAAAATTATCTCCTTGCCAGGACTGCTGGCTCAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTGATAAAGCTAGCTTaGTCTTTGAGTGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLIKLA*SLSVGR
Trigger: TCTTCCTACACTCAAAGACCAAGCTAGCTTTATCAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR TCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTTCTTGAATTTTGTTaGGCTTTGCATGACCTTGGA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLFLEFC*ALHDLG
Trigger: TCCAAGGTCATGCAAAGCTCAACAAAATTCAAGAAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATTCAGTACATGTCTTaGAGTTTTCACTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLIQYMS*SFHCIS
Trigger: GGAAATGCAGTGAAAACTGCAAGACATGTACTGAAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR GCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGAGTTGCAGATCCATTaGAGGTTTTACAAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLELQIH*RFYKKN
Trigger: ATTCTTCTTGTAAAACCTGCAATGGATCTGCAACTC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCATATTCATGTCAGACTaGCAGGGATGTGTATTGTCA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRIFMSD*QGCVLS
Trigger: TGACAATACACATCCCTGCCAGTCTGACATGAATAT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCTTTCGGAAATTCATTaGTTGGTGAATATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLSEIH*LVNMAA
Trigger: TGCAGCCATATTCACCAACCAATGAATTTCCGAAAG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCATTCTGTACAGTTATaGAATTCAGTACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: SISSTACKVYFDKEICKTHSVQL*NSVHVL
Trigger: CAAGACATGTACTGAATTCCATAACTGTACAGAATG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGGCATGGATGGCATTaGTTCTCAAATTCAAATTTC +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLWHGWH*FSNSNF
Trigger: GAAATTTGAATTTGAGAACCAATGCCATCCATGCCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATACTTCTTCTTTCTTTaGAGGCAGAAATTGGGCATA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLYFFFL*RQKLGI
Trigger: TATGCCCAATTTCTGCCTCCAAAGAAAGAAGAAGTA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR CCA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGGTACAATCGCAATATaGACTATTAGCTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRGTIAI*TISFAD
Trigger: ATCTGCAAAGCTAATAGTCCATATTGCGATTGTACC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACATTCTGTACAGTTATaGAATTCAGTACATGTCTTG +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLHSVQL*NSVHVL
Trigger: CAAGACATGTACTGAATTCCATAACTGTACAGAATG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CCA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTCTGGTTGGACTCATaGTTAAAGAAGACAAATAGA +
Preference number: 4 (lower is better)
Translates to: NASEFYPCSSITVEQELLFWLDS*LKKTNR
Trigger: TCTATTTGTCTTCTTTAACCATGAGTCCAACCAGAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GCGACCGGGCGCCCCCTCTGCTGGCCCGGGCTCCAAACGCTCGCTTaGTCGCTCCCAGCGCTCCCTCCGGCTCCGAGCAGCGCGCGAGGA +
Preference number: 5 (lower is better)
Translates to: ATGRPLCWPGLQTLA*SLPALPPAPSSARG
Trigger: TCCTCGCGCGCTGCTCGGAGCCGGAGGGAGCGCTGGGAGCGAGCAAGCGAGCGTTTGGAGCCCGGGCCAGCAGAGGGGGCGCCCGGTCGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp GGCGCTCGGCGATGCTCCCCGGCTCGGACGCAGGAGGAGGCTGAGTaGGGCGGGCGTCCTCCGCAGTTGGGTTTCGCCCGGCTTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GARRCSPARTQEEAE*GGRPPQLGFARLGS
Trigger: GGAGCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCCGCCCCACTCAGCCTCCTCCTGCGTCCGAGCCGGGGAGCATCGCCGAGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GCAGAGCAGCGAGCCTTACGCCGGCTCCTAGACCATCCCTGGGGCTaGCGGGACCTGTGCTCCCAGCTCTCCGGCCCGTGGGGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: AEQRALRRLLDHPWG*RDLCSQLSGPWGAR
Trigger: CCGAGCGCCCCACGGGCCGGAGAGCTGGGAGCACAGGTCCCGGCAGCCCCAGGGATGGTCTAGGAGCCGGCGTAAGGCTCGCTGCTCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp CAGGGAGCAGAGCAGCGAGCCTTACGCCGGCTCCTAGACCATCCCTaGGGCTGCCGGGACCTGTGCTCCCAGCTCTCCGGCCCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: QGAEQRALRRLLDHP*GCRDLCSQLSGPWG
Trigger: GCCCCACGGGCCGGAGAGCTGGGAGCACAGGTCCCGGCAGCCCCAGGGATGGTCTAGGAGCCGGCGTAAGGCTCGCTGCTCTGCTCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp CTCGGACGCAGGAGGAGGCTGAGTGGGGCGGGCGTCCTCCGCAGTTaGGTTTCGCCCGGCTTGGCTCCCGGACTCTCCGACTCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: LGRRRRLSGAGVLRS*VSPGLAPGLSDSVS
Trigger: CGAGACCGAGTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCCGCCCCACTCAGCCTCCTCCTGCGTCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp TATCGCAAGACAGGCAGTCTGTGGGCCGTGGGCCCTGGCACCCCTTaGAGCTCCTGTTGCACCTCTCACACCGGCCAGTGGAGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: YRKTGSLWAVGPGTP*SSCCTSHTGQWSCL
Trigger: CAGACAACTCCACTGGCCGGTGTGAGAGGTGCAACAGGAGCTGCAAGGGGTGCCAGGGCCCACGGCCCACAGACTGCCTGTCTTGCGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp TGCATTCGTCCGTGGTGTCCTGGCAGTCACAGCACTCCTGGGCACTaGGGGGATCAGAGGTGTTGCAGCAGTGGAGGCAGTGGCTGTCGT +
Preference number: 5 (lower is better)
Translates to: CIRPWCPGSHSTPGH*GDQRCCSSGGSGCR
Trigger: ACGACAGCCACTGCCTCCACTGCTGCAACACCTCTGATCCCCCCAGTGCCCAGGAGTGCTGTGACTGCCAGGACACCACGGACGAATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp CACAAGTGGCGCAGAAGCGGTGGCAGGGCTGGCAGTCCTGGCCGTTaGAATACCGTCCATCTTCACAGGAGACAGAGCACCGGGATCCCT +
Preference number: 5 (lower is better)
Translates to: HKWRRSGGRAGSPGR*NTVHLHRRQSTGIP
Trigger: AGGGATCCCGGTGCTCTGTCTCCTGTGAAGATGGACGGTATTTCAACGGCCAGGACTGCCAGCCCTGCCACCGCTTCTGCGCCACTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp GCAGGGCTTGCACCCGGGAGCATCCTCATCCCAGTACTCGGAGGGTaGGCACTTCTCGTTGGCCATGCAGCTCCCACGAGGGTTCATGAT +
Preference number: 5 (lower is better)
Translates to: AGLAPGSILIPVLGG*ALLVGHAAPTRVHD
Trigger: ATCATGAACCCTCGTGGGAGCTGCATGGCCAACGAGAAGTGCTCACCCTCCGAGTACTGGGATGAGGATGCTCCCGGGTGCAAGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp TCAGCTCCTGCCCCAGCACAAGTGGCGCAGAAGCGGTGGCAGGGCTaGCAGTCCTGGCCGTTGAAATACCGTCCATCTTCACAGGAGACA +
Preference number: 5 (lower is better)
Translates to: SAPAPAQVAQKRWQG*QSWPLKYRPSSQET
Trigger: TGTCTCCTGTGAAGATGGACGGTATTTCAACGGCCAGGACTGCCAGCCCTGCCACCGCTTCTGCGCCACTTGTGCTGGGGCAGGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp ATGCACCCATCAGCTCCTGCCCCAGCACAAGTGGCGCAGAAGCGGTaGCAGGGCTGGCAGTCCTGGCCGTTGAAATACCGTCCATCTTCA +
Preference number: 5 (lower is better)
Translates to: MHPSAPAPAQVAQKR*QGWQSWPLKYRPSS
Trigger: TGAAGATGGACGGTATTTCAACGGCCAGGACTGCCAGCCCTGCCACCGCTTCTGCGCCACTTGTGCTGGGGCAGGAGCTGATGGGTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp TTCACAGCCACGTGCCTCTCGGGGCAGTTTTCCTGGCACACTCCGTaGTGCAGGACGTGGCCTCCTTCACAAGAATGGCAGTTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: FTATCLSGQFSWHTP*CRTWPPSQEWQLVA
Trigger: CGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGTGTGCCAGGAAAACTGCCCCGAGAGGCACGTGGCTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS GCA 90 bp TGCCGTCTTCTGCATAAGAGCCCTCCGGGCACTTGGAGTAGCACCTaGCTTCATGGAGGAAGAGAGGGTGGCCCGGCTGCATCTGGCATT +
Preference number: 5 (lower is better)
Translates to: CRLLHKSPPGTWSST*LHGGREGGPAASGI
Trigger: AATGCCAGATGCAGCCGGGCCACCCTCTCTTCCTCCATGAAGGCAGGTGCTACTCCAAGTGCCCGGAGGGCTCTTATGCAGAAGACGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS GCA 90 bp ACAGCCACGTGCCTCTCGGGGCAGTTTTCCTGGCACACTCCGTGGTaGAGGACGTGGCCTCCTTCACAAGAATGGCAGTTGGTGGCGTTT +
Preference number: 5 (lower is better)
Translates to: TATCLSGQFSWHTPW*RTWPPSQEWQLVAF
Trigger: AAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGTGTGCCAGGAAAACTGCCCCGAGAGGCACGTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CCA 90 bp GCATCTTGTGCAGACATGCACGCTGTGGCAAAGCTCACAGTTGTCTaGGCAGGGCAGGCAGGTGTTCCCCTCAGTGGCATAGTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: ASCADMHAVAKLTVV*AGQAGVPLSGIVAL
Trigger: GAGGGCCACTATGCCACTGAGGGGAACACCTGCCTGCCCTGCCCAGACAACTGTGAGCTTTGCCACAGCGTGCATGTCTGCACAAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GGGCGGATTGTCTTGATTTGTCGGTCTGTGCTCTCCACACACACGTaGTGCCGGGGAACGGTGGTCCACTTCTCTGCCTCCATCACCATG +
Preference number: 5 (lower is better)
Translates to: GRIVLICRSVLSTHT*CRGTVVHFSASITM
Trigger: CATGGTGATGGAGGCAGAGAAGTGGACCACCGTTCCCCGGCAGCACGTGTGTGTGGAGAGCACAGACCGACAAATCAAGACAATCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GCAGTCCTTCCTGGCAGCTGCTGCACTCGTCATGACCAGGGCCTGTaGAGGTTTCGCATGCTCGGTGGCAGGACTCACATTCTCCCATTT +
Preference number: 5 (lower is better)
Translates to: AVLPGSCCTRHDQGL*RFRMLGGRTHILPF
Trigger: AAATGGGAGAATGTGAGTCCTGCCACCGAGCATGCGAAACCTGCACAGGCCCTGGTCATGACGAGTGCAGCAGCTGCCAGGAAGGACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp AGGACATGCATTGGTCACCATGGCTCCCAAAGCAGGACTCACAGTTaGGGGCACACTTCCTGCAGCGCTTCTTGTCGGCGTGGTAGTGGC +
Preference number: 5 (lower is better)
Translates to: RTCIGHHGSQSRTHS*GHTSCSASCRRGSG
Trigger: GCCACTACCACGCCGACAAGAAGCGCTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCATGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp TCGTTGGCCATGCAGCTCCCACGAGGGTTCATGATCAGGCCTTTCTaGCAGGTGGTGCAGGTCCCAGATGATGAGCAGGTCAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SLAMQLPRGFMIRPF*QVVQVPDDEQVKQD
Trigger: GTCCTGCTTGACCTGCTCATCATCTGGGACCTGCACCACCTGTCAGAAAGGCCTGATCATGAACCCTCGTGGGAGCTGCATGGCCAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp AGGGTGAGCACTTCTCGTTGGCCATGCAGCTCCCACGAGGGTTCATaGTCAGGCCTTTCTGACAGGTGGTGCAGGTCCCAGATGATGAGC +
Preference number: 5 (lower is better)
Translates to: RVSTSRWPCSSHEGS*SGLSDRWCRSQMMS
Trigger: GCTCATCATCTGGGACCTGCACCACCTGTCAGAAAGGCCTGATCATGAACCCTCGTGGGAGCTGCATGGCCAACGAGAAGTGCTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp CGGATTGTCTTGATTTGTCGGTCTGTGCTCTCCACACACACGTGCTaGCGGGGAACGGTGGTCCACTTCTCTGCCTCCATCACCATGGCT +
Preference number: 5 (lower is better)
Translates to: RIVLICRSVLSTHTC*RGTVVHFSASITMA
Trigger: AGCCATGGTGATGGAGGCAGAGAAGTGGACCACCGTTCCCCGGCAGCACGTGTGTGTGGAGAGCACAGACCGACAAATCAAGACAATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GCACTCCAGACAGTCTTTATGGCAGGGGACACAGTGGCGCGAGTCTaGATAGAAGCCACGGGGACAGGACTGGTGGCACATATCATCGTG +
Preference number: 5 (lower is better)
Translates to: ALQTVFMAGDTVARV*IEATGTGLVAHIIV
Trigger: CACGATGATATGTGCCACCAGTCCTGTCCCCGTGGCTTCTATGCAGACTCGCGCCACTGTGTCCCCTGCCATAAAGACTGTCTGGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp CAGCTTGTAGTAGTAGTGCAAACAGTCATTGCAGTGGTCTGGTCCTaGCCCGTCACAGCCAACCTCACTGCACTCAGGGTCGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: QLVVVVQTVIAVVWS*PVTANLTALRVAGT
Trigger: GGTCCCTGCGACCCTGAGTGCAGTGAGGTTGGCTGTGACGGGCCAGGACCAGACCACTGCAATGACTGTTTGCACTACTACTACAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp CAGTGGACACAGCTTCATTCCAGAATTTGCCCTCCTCCTGGGTCTTaGTGGCATGCACGCACATCCCACGCAGCAGCTGCAGTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: QWTQLHSRICPPPGS*WHARTSHAAAAVLP
Trigger: AGGAAGGACTGCAGCTGCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAATGAAGCTGTGTCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424854.6
ENST00000674117.1
CDS CCA 90 bp TGCCTCTCGGGGCAGTTTTCCTGGCACACTCCGTGGTGCAGGACGTaGCCTCCTTCACAAGAATGGCAGTTGGTGGCGTTTCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: CLSGQFSWHTPWCRT*PPSQEWQLVAFPSH
Trigger: ATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGTGTGCCAGGAAAACTGCCCCGAGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CCA 90 bp AGAGGACCCAGGAACTCTCAAGACAGAGCTCGCAGTCGTCGGCTTTaGGGCCACTGCACTCCAGACAGTCTTTATGGCAGGGGACACAGT +
Preference number: 5 (lower is better)
Translates to: RGPRNSQDRARSRRL*GHCTPDSLYGRGHS
Trigger: ACTGTGTCCCCTGCCATAAAGACTGTCTGGAGTGCAGTGGCCCCAAAGCCGACGACTGCGAGCTCTGTCTTGAGAGTTCCTGGGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp GCAGGTAGTGCAGTCTTCCTGGGTTGGTCCCTGGCACTTGGCACATaGGGCCTCACAGGTCTGGCAGTGGCCATGCTCATCAACATATTC +
Preference number: 5 (lower is better)
Translates to: AGSAVFLGWSLALGT*GLTGLAVAMLINIF
Trigger: GAATATGTTGATGAGCATGGCCACTGCCAGACCTGTGAGGCCTCATGTGCCAAGTGCCAGGGACCAACCCAGGAAGACTGCACTACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GCAGCTGCTGCACTCGTCATGACCAGGGCCTGTGCAGGTTTCGCATaGTCGGTGGCAGGACTCACATTCTCCCATTTCTTGGTCACCATA +
Preference number: 5 (lower is better)
Translates to: AAAALVMTRACAGFA*SVAGLTFSHFLVTI
Trigger: TATGGTGACCAAGAAATGGGAGAATGTGAGTCCTGCCACCGAGCATGCGAAACCTGCACAGGCCCTGGTCATGACGAGTGCAGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp GTGCAGCACCAGGTTGGCAGGGCACAAGGTGCAGTTCTTGGCCCCTaGTCCCTTGCATTCCATGCAGCTCTCGTGGCATTTTTCACAGTT +
Preference number: 5 (lower is better)
Translates to: VQHQVGRAQGAVLGP*SLAFHAALVAFFTV
Trigger: AACTGTGAAAAATGCCACGAGAGCTGCATGGAATGCAAGGGACCAGGGGCCAAGAACTGCACCTTGTGCCCTGCCAACCTGGTGCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp AGACTTGTTGGGGTCGGCCAGTTTTTCATAGCCGGCCTTTGCTGCTaGCTGGACTCGGCCACGAGATTTCTTCCACACTACCACAGCTGC +
Preference number: 5 (lower is better)
Translates to: RLVGVGQFFIAGLCC*LDSATRFLPHYHSC
Trigger: GCAGCTGTGGTAGTGTGGAAGAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCCAACAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTGGGCGTCCTCCGCAGTaGGGTTTCGCCCGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: HGQWEMECTLVDPNEFCCGRPPQ*GFARLG
Trigger: GCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCC...ACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCATTGCTGGCGATACGGTaGGCCTCCGGGAAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: SKALRSMKPARWLVTCKALLAIR*ASGKPP
Trigger: CGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCAA...TGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS TCA 90 bp GTGCTCCAGGTAGTTGACATGGCGGTTGGGGTTATCCGAGCAGCCTaGAGCTTTGTAGATGGAGCGCACTGCACTGTTAGGGCGGATTGT +
Preference number: 5 (lower is better)
Translates to: VLQVVDMAVGVIRAA*SFVDGAHCTVRADC
Trigger: ACAATCCGCCCTAACAGTGCAGTGCGCTCCATCTACAAAGCTTCAGGCTGCTCGGATAACCCCAACCGCCATGTCAACTACCTGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GCCATCACAGGAGCAGTGGTCTTTGCTCCTTCCACCATTTCCAGATaGCCAAACAAACACAGAGCCGAGGCCTCTCCGCCCCATTCTAAC +
Preference number: 5 (lower is better)
Translates to: AITGAVVFAPSTISR*PNKHRAEASPPHSN
Trigger: GTTAGAATGGGGCGGAGAGGCCTCGGCTCTGTGTTTGTTTGGGCATCTGGAAATGGTGGAAGGAGCAAAGACCACTGCTCCTGTGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GTAAGACTTGTTGGGGTCGGCCAGTTTTTCATAGCCGGCCTTTGCTaGTGGCTGGACTCGGCCACGAGATTTCTTCCACACTACCACAGC +
Preference number: 5 (lower is better)
Translates to: VRLVGVGQFFIAGLC*WLDSATRFLPHYHS
Trigger: GCTGTGGTAGTGTGGAAGAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCCAACAAGTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GGAGTAAGACTTGTTGGGGTCGGCCAGTTTTTCATAGCCGGCCTTTaGTGCTGGCTGGACTCGGCCACGAGATTTCTTCCACACTACCAC +
Preference number: 5 (lower is better)
Translates to: GVRLVGVGQFFIAGL*CWLDSATRFLPHYH
Trigger: GTGGTAGTGTGGAAGAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCCAACAAGTCTTACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp CAGGGTCGCAGGGACCTGCATAATCCTCTGTGCCATAGTCGTCTGTaGGGTCTTCAACTCGGCTATAGCGGAACCGTTCCACTTTCGGAA +
Preference number: 5 (lower is better)
Translates to: QGRRDLHNPLCHSRL*GLQLGYSGTVPLSE
Trigger: TTCCGAAAGTGGAACGGTTCCGCTATAGCCGAGTTGAAGACCCCACAGACGACTATGGCACAGAGGATTATGCAGGTCCCTGCGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp CTCCGTGGTGCAGGACGTGGCCTCCTTCACAAGAATGGCAGTTGGTaGCGTTTCCTTCACATGTTCTGCAAGGAGAGCTACAGCGTTCAC +
Preference number: 5 (lower is better)
Translates to: LRGAGRGLLHKNGSW*RFLHMFCKESYSVH
Trigger: GTGAACGCTGTAGCTCTCCTTGCAGAACATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CCA 90 bp TCCTGGCACACTCCGTGGTGCAGGACGTGGCCTCCTTCACAAGAATaGCAGTTGGTGGCGTTTCCTTCACATGTTCTGCAAGGAGAGCTA +
Preference number: 5 (lower is better)
Translates to: SWHTPWCRTWPPSQE*QLVAFPSHVLQGEL
Trigger: TAGCTCTCCTTGCAGAACATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGTGTGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS-3UTR CAA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAATGGGTTTCGCCCGGCTaGGCTCCCGGACTCTCCGAC +
Preference number: 5 (lower is better)
Translates to: LSKALRSMKPARWLVTCKWVSPG*APGLSD
Trigger: GTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCA...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS CCA 90 bp TCCTGGGTTGGTCCCTGGCACTTGGCACATGAGGCCTCACAGGTCTaGCAGTGGCCATGCTCATCAACATATTCTCCATCCTTGCAAATG +
Preference number: 5 (lower is better)
Translates to: SWVGPWHLAHEASQV*QWPCSSTYSPSLQM
Trigger: CATTTGCAAGGATGGAGAATATGTTGATGAGCATGGCCACTGCCAGACCTGTGAGGCCTCATGTGCCAAGTGCCAGGGACCAACCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp ACACTCCGTGGTGCAGGACGTGGCCTCCTTCACAAGAATGGCAGTTaGTGGCGTTTCCTTCACATGTTCTGCAAGGAGAGCTACAGCGTT +
Preference number: 5 (lower is better)
Translates to: TLRGAGRGLLHKNGS*WRFLHMFCKESYSV
Trigger: AACGCTGTAGCTCTCCTTGCAGAACATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CCA 90 bp GCACTCTTTGCATGTTTTCTCATGGATGCAGTCCTGACACATCTCTaGGCAATGCTTGCATACCCCCTTCACAGCCACGTGCCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: ALFACFLMDAVLTHL*AMLAYPLHSHVPLG
Trigger: CCCGAGAGGCACGTGGCTGTGAAGGGGGTATGCAAGCATTGCCCAGAGATGTGTCAGGACTGCATCCATGAGAAAACATGCAAAGAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTGCTGGCGATACGGTaGGCCTCCGGGAAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLLAIR*ASGKPP
Trigger: CGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGGCCCTGGCACCCCTaGCAGCTCCTGTTGCACCTC +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGPWHP*QLLLHL
Trigger: GAGGTGCAACAGGAGCTGCAAGGGGTGCCAGGGCCC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp CTTGTCCACACTCTAACTTCTGGCATGTGTGGTTGGTGGGCGCTATaGAGTAGCCCTTCATGCATCTTGTGCAGACATGCACGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: LVHTLTSGMCGWWAL*SSPSCILCRHARCG
Trigger: GCCACAGCGTGCATGTCTGCACAAGATGCATGAAGGGCTACTTCATAGCGCCCACCAACCACACATGCCAGAAGTTAGAGTGTGGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp TTCACACAGGTTGTGTTGAGAAGAAGGCTGTTCATGGGGCATGTTTaGCACTGGTCCTCCGCCGGCCCCATGCAGTGGAAGCACTTAACA +
Preference number: 5 (lower is better)
Translates to: FTQVVLRRRLFMGHV*HWSSAGPMQWKHLT
Trigger: TGTTAAGTGCTTCCACTGCATGGGGCCGGCGGAGGACCAGTGTCAAACATGCCCCATGAACAGCCTTCTTCTCAACACAACCTGTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp CGTTTCCTTCACATGTTCTGCAAGGAGAGCTACAGCGTTCACATATaGCGTCTTCTGCATAAGAGCCCTCCGGGCACTTGGAGTAGCACC +
Preference number: 5 (lower is better)
Translates to: RFLHMFCKESYSVHI*RLLHKSPPGTWSST
Trigger: GGTGCTACTCCAAGTGCCCGGAGGGCTCTTATGCAGAAGACGGCATATGTGAACGCTGTAGCTCTCCTTGCAGAACATGTGAAGGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CCA 90 bp TGGAAGCCAGCTCACCTGCATAATCCTCTGTGCCATAGTCGTCTGTaGGGTCTTCAACTCGGCTATAGCGGAACCGTTCCACTTTCGGAA +
Preference number: 5 (lower is better)
Translates to: WKPAHLHNPLCHSRL*GLQLGYSGTVPLSE
Trigger: TTCCGAAAGTGGAACGGTTCCGCTATAGCCGAGTTGAAGACCCCACAGACGACTATGGCACAGAGGATTATGCAGGTGAGCTGGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS CCA 90 bp GTTTTTCAGCTTGTAGTAGTAGTGCAAACAGTCATTGCAGTGGTCTaGTCCTGGCCCGTCACAGCCAACCTCACTGCACTCAGGGTCGCA +
Preference number: 5 (lower is better)
Translates to: VFQLVVVVQTVIAVV*SWPVTANLTALRVA
Trigger: TGCGACCCTGAGTGCAGTGAGGTTGGCTGTGACGGGCCAGGACCAGACCACTGCAATGACTGTTTGCACTACTACTACAAGCTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp GTGCAGTGGGTAGGGCCACTTCCTTGGCATCTCTGGCAGGTGTGGTaGCATGGATGGCATTGGTTCTCAAATTCAAATTTCCATGAGGGG +
Preference number: 5 (lower is better)
Translates to: VQWVGPLPWHLWQVW*HGWHWFSNSNFHEG
Trigger: CCCCTCATGGAAATTTGAATTTGAGAACCAATGCCATCCATGCCACCACACCTGCCAGAGATGCCAAGGAAGTGGCCCTACCCACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp GGCTGGAGTTTTCTCAAAATATCATTCCAGAATTTGCCCTCCTCCTaGGTCTTGGTGGCATGCACGCACATCCCACGCAGCAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GWSFLKISFQNLPSS*VLVACTHIPRSSCS
Trigger: ACTGCAGCTGCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAATGATATTTTGAGAAAACTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000673745.1
CDS-3UTR CAA 90 bp CCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCAAGACTGTGCAGTGCGAATaGTTTGCAGCGGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: PSGPVFCHFPQWWTQACKTVQCE*FAAAAT
Trigger: AGTGGCAGCCGCTGCAAACAATTCGCACTGCACAGT...CTTGCATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS TCA 90 bp AACTCAGGCGTGCACTCTTTGCATGTTTTCTCATGGATGCAGTCCTaGCACATCTCTGGGCAATGCTTGCATACCCCCTTCACAGCCACG +
Preference number: 5 (lower is better)
Translates to: NSGVHSLHVFSWMQS*HISGQCLHTPFTAT
Trigger: CGTGGCTGTGAAGGGGGTATGCAAGCATTGCCCAGAGATGTGTCAGGACTGCATCCATGAGAAAACATGCAAAGAGTGCACGCCTGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp TCATTAGCGTTCAAATGTCCCGCACGGGAAGTCCTGACAATAACATaGTGTACGTCTCTCCAGGTCAGAAACGGATTGGCTTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SLAFKCPAREVLTIT*CTSLQVRNGLASRA
Trigger: GGCCCTGGAAGCCAATCCGTTTCTGACCTGGAGAGACGTACAGCATGTTATTGTCAGGACTTCCCGTGCGGGACATTTGAACGCTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp GCGAGTCCCATGCTTGTTCTCGTTGCTTGCATCATAACGAGGCATTaGGTCCAAGTCATTCCCATTCACGTCGCAACTTGCCAGAGCATC +
Preference number: 5 (lower is better)
Translates to: ASPMLVLVACIITRH*VQVIPIHVATCQSI
Trigger: GATGCTCTGGCAAGTTGCGACGTGAATGGGAATGACTTGGACCCAATGCCTCGTTATGATGCAAGCAACGAGAACAAGCATGGGACTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp TGGTGCTCTCTCTATAGCTGCTCTTATAGGAGGAGTAAGACTTGTTaGGGTCGGCCAGTTTTTCATAGCCGGCCTTTGCTGCTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: WCSLYSCSYRRSKTC*GRPVFHSRPLLLAG
Trigger: TCCAGCCAGCAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCCAACAAGTCTTACTCCTCCTATAAGAGCAGCTATAGAGAGAGCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp GTTTTCTCAAAATATCATTCCAGAATTTGCCCTCCTCCTGGGTCTTaGTGGCATGCACGCACATCCCACGCAGCAGCTGCAGTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: VFSKYHSRICPPPGS*WHARTSHAAAAVLP
Trigger: AGGAAGGACTGCAGCTGCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAATGATATTTTGAGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000673745.1
CDS-3UTR CAA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCGCACTCCTCCGATCTaGGCGTTGAAAGCAATTCCG +
Preference number: 5 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLRTPPI*ALKAIP
Trigger: CGGAATTGCTTTCAACGCCAAGATCGGAGGAGTGCG...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AGGATAGTCCATGTTGATAGTATTCCTCTCCTCAGCTGTGACTCCAGCAGCATCAAGCAGGACTCACAGTaGGGGGCACACTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RIVHVDSIPLLSCDSSSIKQDSQ*GAHFLQ
Trigger: CTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCTT...GATGCTGCTGGAGTCACAGCTGAGGAGAGGAATACTATCAACATGGACTATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACCCTTGCAGCTCCTGTaGCACCTCTCACACCGGCCA +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTPLQLL*HLSHRP
Trigger: TGGCCGGTGTGAGAGGTGCAACAGGAGCTGCAAGGG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp TCGGCTATAGCGGAACCGTTCCACTTTCGGAAATTCATTGGTTGGTaGATATGGCTGCACGGAGGTGCCGTAGAGGACCAAAGACCATTC +
Preference number: 5 (lower is better)
Translates to: SAIAEPFHFRKFIGW*IWLHGGAVEDQRPF
Trigger: GAATGGTCTTTGGTCCTCTACGGCACCTCCGTGCAGCCATATTCACCAACCAATGAATTTCCGAAAGTGGAACGGTTCCGCTATAGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp CTCTGTATTCCCCCACAAGACAGTCCGAGGTGCAGATCCCTCCCATaGGGTGGTAACTCCACACACAGGATAAACAATTCAACGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LCIPPQDSPRCRSLP*GGNSTHRINNSTLL
Trigger: AAGGAGCGTTGAATTGTTTATCCTGTGTGTGGAGTTACCACCTCATGGGAGGGATCTGCACCTCGGACTGTCTTGTGGGGGAATACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp CTTCAACTCGGCTATAGCGGAACCGTTCCACTTTCGGAAATTCATTaGTTGGTGAATATGGCTGCACGGAGGTGCCGTAGAGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: LQLGYSGTVPLSEIH*LVNMAARRCRRGPK
Trigger: CTTTGGTCCTCTACGGCACCTCCGTGCAGCCATATTCACCAACCAATGAATTTCCGAAAGTGGAACGGTTCCGCTATAGCCGAGTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp GTAGGGCCACTTCCTTGGCATCTCTGGCAGGTGTGGTGGCATGGATaGCATTGGTTCTCAAATTCAAATTTCCATGAGGGGCAGTTCGAA +
Preference number: 5 (lower is better)
Translates to: VGPLPWHLWQVWWHG*HWFSNSNFHEGQFE
Trigger: TTCGAACTGCCCCTCATGGAAATTTGAATTTGAGAACCAATGCCATCCATGCCACCACACCTGCCAGAGATGCCAAGGAAGTGGCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp GCATCTCTCACAGGTCTGTGTGCTTTGCTCTACATAGTAATGGTCTaGGCAGGAGCGATGACACTCTCCTTTGGAGCGGAGCAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: ASLTGLCALLYIVMV*AGAMTLSFGAEQKE
Trigger: TTCTTTCTGCTCCGCTCCAAAGGAGAGTGTCATCGCTCCTGCCCAGACCATTACTATGTAGAGCAAAGCACACAGACCTGTGAGAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGGGTTTCGCCCGGCTaGGCTCCCGGACTCTCCGAC +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTWVSPG*APGLSD
Trigger: GTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTGCTGGCGATACGGTaGGCCTCCGGGAAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLLAIR*ASGKPP
Trigger: CGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTTTGATGAATCCGTACTaGCTGGCGATACGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLLMNPY*LAIRLA
Trigger: GGCCAACCGTATCGCCAGCAAGTACGGATTCATCAA...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CACCTGCATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTCCTCCGATCTTGGCGTaGAAAGCAATTCCGACTGTG +
Preference number: 5 (lower is better)
Translates to: HLHGQWEMECTLVDPNEFPPILA*KAIPTV
Trigger: CACAGTCGGAATTGCTTTCAACGCCAAGATCGGAGG...AAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTGGTCCGTCCACAGTCTaGCCATCATCATCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSGPSTV*PSSSGP
Trigger: GGGCCCGGATGATGATGGCAAGACTGTGGACGGACC...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACAGGTCAGAAACGGATaGGCTTCCAGGGCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTQVRNG*ASRASA
Trigger: TGCGCTGGCCCTGGAAGCCAATCCGTTTCTGACCTG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGGCGGATTGTCTTGATTaGTCGGTCTGTGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMADCLD*SVCALH
Trigger: GTGGAGAGCACAGACCGACAAATCAAGACAATCCGC...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATGCAGTCTTCCTGGGTaGGTCCCTGGCACTTGGCAC +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTCSLPG*VPGTWH
Trigger: GTGCCAAGTGCCAGGGACCAACCCAGGAAGACTGCA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGGTGAGCACTTCTCGTaGGCCATGCAGCTCCCACGA +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTGEHFS*AMQLPR
Trigger: TCGTGGGAGCTGCATGGCCAACGAGAAGTGCTCACC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTTCATGGGGCATGTTaGACACTGGTCCTCCGCCGG +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVHGAC*TLVLRR
Trigger: CCGGCGGAGGACCAGTGTCAAACATGCCCCATGAAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGGCCCTGGCACCCCTaGCAGCTCCTGTTGCACCTC +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTGPWHP*QLLLHL
Trigger: GAGGTGCAACAGGAGCTGCAAGGGGTGCCAGGGCCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp TCCTGGTATTGTTTTTCAGCTTGTAGTAGTAGTGCAAACAGTCATTaGAGTGGTCTGGTCCTGGCCCGTCACAGCCAACCTCACTGCACT +
Preference number: 5 (lower is better)
Translates to: SWYCFSACSSSANSH*SGLVLARHSQPHCT
Trigger: AGTGCAGTGAGGTTGGCTGTGACGGGCCAGGACCAGACCACTGCAATGACTGTTTGCACTACTACTACAAGCTGAAAAACAATACCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp GTGGCAATCTCTGCACTCCTTAGTCTCCTTTTCATAATAGGTTCCTaGTGGACACTCCTCCAAGCACAGTCCATCATAGAGGACCCAGGA +
Preference number: 5 (lower is better)
Translates to: VAISALLSLLFIIGS*WTLLQAQSIIEDPG
Trigger: TCCTGGGTCCTCTATGATGGACTGTGCTTGGAGGAGTGTCCAGCAGGAACCTATTATGAAAAGGAGACTAAGGAGTGCAGAGATTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp CATCATGGAGGAGGTGATGAACAGAGCTGTCTTGAAATGCTCAGTTaGAGGCCTAACCTTGCTTGTTCGAAGGATGCATTCGTCCGTGGT +
Preference number: 5 (lower is better)
Translates to: HHGGGDEQSCLEMLS*RPNLACSKDAFVRG
Trigger: ACCACGGACGAATGCATCCTTCGAACAAGCAAGGTTAGGCCTGCAACTGAGCATTTCAAGACAGCTCTGTTCATCACCTCCTCCATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp AGCACCAGCATCATGGAGGAGGTGATGAACAGAGCTGTCTTGAAATaGTCAGTTGCAGGCCTAACCTTGCTTGTTCGAAGGATGCATTCG +
Preference number: 5 (lower is better)
Translates to: STSIMEEVMNRAVLK*SVAGLTLLVRRMHS
Trigger: CGAATGCATCCTTCGAACAAGCAAGGTTAGGCCTGCAACTGAGCATTTCAAGACAGCTCTGTTCATCACCTCCTCCATGATGCTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp TCATTCAGAAAGTATCCATATTTGCAGGACATGCATTGGTCACCATaGCTCCCAAAGCAGGACTCACAGTTGGGGGCACACTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SFRKYPYLQDMHWSP*LPKQDSQLGAHFLQ
Trigger: CTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAATATGGATACTTTCTGAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp CCACTTCCTTGGCATCTCTGGCAGGTGTGGTGGCATGGATGGCATTaGTTCTCAAATTCAAATTTCCATGAGGGGCAGTTCGAAACACAG +
Preference number: 5 (lower is better)
Translates to: PLPWHLWQVWWHGWH*FSNSNFHEGQFETQ
Trigger: CTGTGTTTCGAACTGCCCCTCATGGAAATTTGAATTTGAGAACCAATGCCATCCATGCCACCACACCTGCCAGAGATGCCAAGGAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGGGCGTCCTCCGCAGTaGGGTTTCGCCCGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRGRPPQ*GFARLG
Trigger: GCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAATGCAGTGCGAATTGTTaGCAGCGGCTGCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: LSKALRSMKPARWLVTCKCSANC*QRLPLL
Trigger: GAGAAGTGGCAGCCGCTGCAAACAATTCGCACTGCA...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTTTAGGGCGGATTGTCTaGATTTGTCGGTCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLLGRIV*ICRSVL
Trigger: GAGCACAGACCGACAAATCAAGACAATCCGCCCTAA...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCTTTGCAGGACATGCATaGGTCACCATGGCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSFAGHA*VTMAPK
Trigger: TTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAA...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCCAGCTTGTACAGTTCTaGAATCCTGGGCCATTGCAC +
Preference number: 5 (lower is better)
Translates to: QHLLSKALRSMKPARWLVQLVQF*NPGPLH
Trigger: GTGCAATGGCCCAGGATTCAAGAACTGTACAAGCTG...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTAACATGGCAGGGCTaGCACCCGGGAGCATCCTCA +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLTWQG*HPGASS
Trigger: TGAGGATGCTCCCGGGTGCAAGCCCTGCCATGTTAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp GCAATCTCTGCACTCCTTAGTCTCCTTTTCATAATAGGTTCCTGCTaGACACTCCTCCAAGCACAGTCCATCATAGAGGACCCAGGAACT +
Preference number: 5 (lower is better)
Translates to: AISALLSLLFIIGSC*TLLQAQSIIEDPGT
Trigger: AGTTCCTGGGTCCTCTATGATGGACTGTGCTTGGAGGAGTGTCCAGCAGGAACCTATTATGAAAAGGAGACTAAGGAGTGCAGAGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTGGGTTTCGCCCGGCTaGGCTCCCGGACTCTCCGAC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRWVSPG*APGLSD
Trigger: GTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATAAGCCCCCGGCGATTTaGACTGCCCAGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYKPPAI*TAQWLV
Trigger: CACCAACCACTGGGCAGTCAAAATCGCCGGGGGCTT...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTTGCTGGCGATACGGTaGGCCTCCGGGAAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLLAIR*ASGKPP
Trigger: CGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCAA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp CCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGCAAGTTTTACCACTTGCTGTaGGATCCATTCCACCTTTGG +
Preference number: 5 (lower is better)
Translates to: PSGPVFCHFPQWWTQACKFYHLL*DPFHLW
Trigger: CCAAAGGTGGAATGGATCCAACAGCAAGTGGTAAAA...CTTGCATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGTGGCAGGGATGTGTATaGTCACTGCAGTGCATATAC +
Preference number: 5 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMWQGCV*SLQCIY
Trigger: GTATATGCACTGCAGTGACAATACACATCCCTGCCA...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCATCATAACGAGGCATaGGGTCCAAGTCATTCCCAT +
Preference number: 5 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLHHNEA*GPSHSH
Trigger: ATGGGAATGACTTGGACCCAATGCCTCGTTATGATG...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGTCCGTCCACAGTCTaGCCATCATCATCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTGPSTV*PSSSGP
Trigger: GGGCCCGGATGATGATGGCAAGACTGTGGACGGACC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGCAGGAGCAGTGGTCTTaGCTCCTTCCACCATTTCCA +
Preference number: 5 (lower is better)
Translates to: PARWLVTCKANEVTNEALQEQWS*LLPPFP
Trigger: TGGAAATGGTGGAAGGAGCAAAGACCACTGCTCCTG...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTGACGTCCCAGTGTGGTaGTCCGTGCAACGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVDVPVW*SVQRCL
Trigger: GAGGCAGCGTTGCACGGACAACCACACTGGGACGTC...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGACGTCCCAGTGTGGTaGTCCGTGCAACGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTDVPVW*SVQRCL
Trigger: GAGGCAGCGTTGCACGGACAACCACACTGGGACGTC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGTGGCAGTCCTGGCCGTaGAAATACCGTCCATCTTCA +
Preference number: 5 (lower is better)
Translates to: PARWLVTCKANEVTNEALWQSWP*KYRPSS
Trigger: TGAAGATGGACGGTATTTCAACGGCCAGGACTGCCA...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCGCAGTCGTCGGCTTaGGGGCCACTGCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSQSSA*GPLHSR
Trigger: TCTGGAGTGCAGTGGCCCCAAAGCCGACGACTGCGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGGGGATCAGAGGTGTaGCAGCAGTGGAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGGSEV*QQWRQW
Trigger: CCACTGCCTCCACTGCTGCAACACCTCTGATCCCCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp AACACCCATTCTGGTCACAGCTGCCACAGTTACTATCACACGCCTTaGATTCCACTTCCTCACTGTAGGTCTTCTCAGGACAGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: NTHSGHSCHSYYHTP*IPLPHCRSSQDRFY
Trigger: ATAAAACCTGTCCTGAGAAGACCTACAGTGAGGAAGTGGAATGCAAGGCGTGTGATAGTAACTGTGGCAGCTGTGACCAGAATGGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp AGTCCCGATCCCTGTACTCAATCACCTGATCCTCTTCAAAGCTGGTaGTCTCTCTATAGCTGCTCTTATAGGAGGAGTAAGACTTGTTGG +
Preference number: 5 (lower is better)
Translates to: SPDPCTQSPDPLQSW*SLYSCSYRRSKTCW
Trigger: CCAACAAGTCTTACTCCTCCTATAAGAGCAGCTATAGAGAGAGCACCAGCTTTGAAGAGGATCAGGTGATTGAGTACAGGGATCGGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp TTGGTTTCTTCATTCAGAAAGTATCCATATTTGCAGGACATGCATTaGTCACCATGGCTCCCAAAGCAGGACTCACAGTTGGGGGCACAC +
Preference number: 5 (lower is better)
Translates to: LVSSFRKYPYLQDMH*SPWLPKQDSQLGAH
Trigger: GTGTGCCCCCAACTGTGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAATATGGATACTTTCTGAATGAAGAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAAGCCCCCGGCGATTTaGACTGCCCAGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTKPPAI*TAQWLV
Trigger: CACCAACCACTGGGCAGTCAAAATCGCCGGGGGCTT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTCATTCACGTCGCAACTaGCCAGAGCATCGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: LLSKALRSMKPARWLVTCHSRRN*PEHRSF
Trigger: AAAACTACGATGCTCTGGCAAGTTGCGACGTGAATG...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAATGCACGTGCTGGGGGTaGAAGCTAACTGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: LSKALRSMKPARWLVTCKCTCWG*KLTDFA
Trigger: AGCAAAATCAGTTAGCTTCAACCCCCAGCACGTGCA...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGGTCCGTCCACAGTCTaGCCATCATCATCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLGPSTV*PSSSGP
Trigger: GGGCCCGGATGATGATGGCAAGACTGTGGACGGACC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGACGTCCCAGTGTGGTaGTCCGTGCAACGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLDVPVW*SVQRCL
Trigger: GAGGCAGCGTTGCACGGACAACCACACTGGGACGTC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTCAGGTCAGAAACGGATaGGCTTCCAGGGCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVQVRNG*ASRASA
Trigger: TGCGCTGGCCCTGGAAGCCAATCCGTTTCTGACCTG...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGGTCAGAAACGGATaGGCTTCCAGGGCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTQVRNG*ASRASA
Trigger: TGCGCTGGCCCTGGAAGCCAATCCGTTTCTGACCTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCGGATTGTCTTGATTaGTCGGTCTGTGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTADCLD*SVCALH
Trigger: GTGGAGAGCACAGACCGACAAATCAAGACAATCCGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCCTAGCTTGAATCCTGGGCCATaGCACGTCAAACAACTGATA +
Preference number: 5 (lower is better)
Translates to: RLFPSLLFGWGPQHLLPSLNPGP*HVKQLI
Trigger: TATCAGTTGTTTGACGTGCAATGGCCCAGGATTCAA...GCTAGGAAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CACCTGCATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTTTGCAGCAAAGTTGTaGAAGAACCTTCCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: HLHGQWEMECTLVDPNEFFAAKL*KNLPLA
Trigger: TGCCAACGGAAGGTTCTTCAACAACTTTGCTGCAAA...AAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CAAGGCAGGCTTTTTCCTAGCTTGCTGTTTGGATGGGGACCTCAGCATCTACTTCTGTCCATCACCAATTaGACTATACAGAGCAATCCC +
Preference number: 5 (lower is better)
Translates to: QGRLFPSLLFGWGPQHLLLSITN*TIQSNP
Trigger: GGGATTGCTCTGTATAGTCAAATTGGTGATGGACAG...AAGTAGATGCTGAGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCTGCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATAGGCTTTTTCCTAGCTaGCTGTTTGGATGGGGACCT +
Preference number: 5 (lower is better)
Translates to: KALRSMKPARWLVTCKANRLFPS*LFGWGP
Trigger: AGGTCCCCATCCAAACAGCAAGCTAGGAAAAAGCCT...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTTGGTCCCTGGCACTaGGCACATGAGGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVGPWH*AHEASQ
Trigger: CTGTGAGGCCTCATGTGCCAAGTGCCAGGGACCAAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTTGGTCCCTGGCACTaGGCACATGAGGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTVGPWH*AHEASQ
Trigger: CTGTGAGGCCTCATGTGCCAAGTGCCAGGGACCAAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAGCCCTTCATGCATCTaGTGCAGACATGCACGCTGT +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSPSCI*CRHARC
Trigger: ACAGCGTGCATGTCTGCACAAGATGCATGAAGGGCT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCGCAGTCGTCGGCTTaGGGGCCACTGCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLSQSSA*GPLHSR
Trigger: TCTGGAGTGCAGTGGCCCCAAAGCCGACGACTGCGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGTTCATGGGGCATGTTaGACACTGGTCCTCCGCCGG +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTVHGAC*TLVLRR
Trigger: CCGGCGGAGGACCAGTGTCAAACATGCCCCATGAAC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCCTTGCAGCTCCTGTaGCACCTCTCACACCGGCCA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLPLQLL*HLSHRP
Trigger: TGGCCGGTGTGAGAGGTGCAACAGGAGCTGCAAGGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAATGTGCAGCACCAGGTaGGCAGGGCACAAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTMCSTR*AGHKVQ
Trigger: CTGCACCTTGTGCCCTGCCAACCTGGTGCTGCACAT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGGGGGATCAGAGGTGTaGCAGCAGTGGAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLGGSEV*QQWRQW
Trigger: CCACTGCCTCCACTGCTGCAACACCTCTGATCCCCC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTTCATAGCCGGCCTTaGCTGCTGGCTGGACTCGGC +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFHSRP*LLAGLG
Trigger: GCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp GGTGTGGTGGCATGGATGGCATTGGTTCTCAAATTCAAATTTCCATaGGGGGCAGTTCGAAACACAGCGGCCATCATCAAAAATCCTTGT +
Preference number: 5 (lower is better)
Translates to: GVVAWMALVLKFKFP*GAVRNTAAIIKNPC
Trigger: ACAAGGATTTTTGATGATGGCCGCTGTGTTTCGAACTGCCCCTCATGGAAATTTGAATTTGAGAACCAATGCCATCCATGCCACCACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp ACTCAATCACCTGATCCTCTTCAAAGCTGGTGCTCTCTCTATAGCTaGTCTTATAGGAGGAGTAAGACTTGTTGGGGTCGGCCAGTTTTT +
Preference number: 5 (lower is better)
Translates to: TQSPDPLQSWCSLYS*SYRRSKTCWGRPVF
Trigger: AAAAACTGGCCGACCCCAACAAGTCTTACTCCTCCTATAAGAGCAGCTATAGAGAGAGCACCAGCTTTGAAGAGGATCAGGTGATTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp CATAGTCCCGATCCCTGTACTCAATCACCTGATCCTCTTCAAAGCTaGTGCTCTCTCTATAGCTGCTCTTATAGGAGGAGTAAGACTTGT +
Preference number: 5 (lower is better)
Translates to: HSPDPCTQSPDPLQS*CSLYSCSYRRSKTC
Trigger: ACAAGTCTTACTCCTCCTATAAGAGCAGCTATAGAGAGAGCACCAGCTTTGAAGAGGATCAGGTGATTGAGTACAGGGATCGGGACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATCAGAGCATCGTAGTTTaGCATCAGATCTGGATGGGT +
Preference number: 5 (lower is better)
Translates to: KALRSMKPARWLVTCKANQSIVV*HQIWMG
Trigger: ACCCATCCAGATCTGATGCAAAACTACGATGCTCTG...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGGTCCGTCCACAGTCTaGCCATCATCATCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRGPSTV*PSSSGP
Trigger: GGGCCCGGATGATGATGGCAAGACTGTGGACGGACC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGACGTCCCAGTGTGGTaGTCCGTGCAACGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRDVPVW*SVQRCL
Trigger: GAGGCAGCGTTGCACGGACAACCACACTGGGACGTC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAGCAGGACTCACAGTaGGGGGCACACTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKQDSQ*GAHFLQ
Trigger: CTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTTGCAGGACATGCATaGGTCACCATGGCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTFAGHA*VTMAPK
Trigger: TTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACAGCTTGTACAGTTCTaGAATCCTGGGCCATTGCAC +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTQLVQF*NPGPLH
Trigger: GTGCAATGGCCCAGGATTCAAGAACTGTACAAGCTG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGCAGTCTTCCTGGGTaGGTCCCTGGCACTTGGCAC +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLCSLPG*VPGTWH
Trigger: GTGCCAAGTGCCAGGGACCAACCCAGGAAGACTGCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGGTAGGGCCACTTCCTaGGCATCTCTGGCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLGRATS*ASLAGV
Trigger: CACACCTGCCAGAGATGCCAAGGAAGTGGCCCTACC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGGTGAGCACTTCTCGTaGGCCATGCAGCTCCCACGA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLGEHFS*AMQLPR
Trigger: TCGTGGGAGCTGCATGGCCAACGAGAAGTGCTCACC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTAACATGGCAGGGCTaGCACCCGGGAGCATCCTCA +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLTWQG*HPGASS
Trigger: TGAGGATGCTCCCGGGTGCAAGCCCTGCCATGTTAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTGGCCCCTGGTCCCTaGCATTCCATGCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLLAPGP*HSMQLS
Trigger: CGAGAGCTGCATGGAATGCAAGGGACCAGGGGCCAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACACAAGGTGCAGTTCTaGGCCCCTGGTCCCTTGCAT +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHKVQF*APGPLH
Trigger: ATGCAAGGGACCAGGGGCCAAGAACTGCACCTTGTG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATGTGCAGCACCAGGTaGGCAGGGCACAAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLMCSTR*AGHKVQ
Trigger: CTGCACCTTGTGCCCTGCCAACCTGGTGCTGCACAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGTTGCAGGCCTAACCTaGCTTGTTCGAAGGATGCAT +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTVAGLT*LVRRMH
Trigger: ATGCATCCTTCGAACAAGCAAGGTTAGGCCTGCAAC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTTCATAGCCGGCCTTaGCTGCTGGCTGGACTCGGC +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLFHSRP*LLAGLG
Trigger: GCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS CCA 90 bp TGCTGTTGGATCCATTCCACCTTTGGTTCCATTGAAATGAAACTGTaGGTCCCTCTGCTCGAGATAACTGACCTTTTAATCGTCCTGCTA +
Preference number: 5 (lower is better)
Translates to: CCWIHSTFGSIEMKL*VPLLEITDLLIVLL
Trigger: TAGCAGGACGATTAAAAGGTCAGTTATCTCGAGCAGAGGGACCCACAGTTTCATTTCAATGGAACCAAAGGTGGAATGGATCCAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCAAGCCCCCGGCGATTTaGACTGCCCAGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRKPPAI*TAQWLV
Trigger: CACCAACCACTGGGCAGTCAAAATCGCCGGGGGCTT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp CCTGCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGCCTATCTGTCCTATGTaGATGAATCCGTACTTGCTG +
Preference number: 5 (lower is better)
Translates to: PARWLVTCKANEVTNEALPICPM*MNPYLL
Trigger: CAGCAAGTACGGATTCATCAACATAGGACAGATAGG...CAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACATCATAACGAGGCATaGGGTCCAAGTCATTCCCAT +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTHHNEA*GPSHSH
Trigger: ATGGGAATGACTTGGACCCAATGCCTCGTTATGATG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAGCTTGTTCTCGTTGCTaGCATCATAACGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTACSRC*HHNEAL
Trigger: CAATGCCTCGTTATGATGCAAGCAACGAGAACAAGC...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp ATGGAATGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATCAGCGAGTCCCATGCTaGTTCTCGTTGCTTGCATCA +
Preference number: 5 (lower is better)
Translates to: MECTLVDPNEFCCHVDGYQRVPC*FSLLAS
Trigger: TGATGCAAGCAACGAGAACAAGCATGGGACTCGCTG...ATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAACTGTGCAGTGCGAATaGTTTGCAGCGGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTTVQCE*FAAAAT
Trigger: AGTGGCAGCCGCTGCAAACAATTCGCACTGCACAGT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCACTGTGCAGTGCGAATaGTTTGCAGCGGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTTVQCE*FAAAAT
Trigger: AGTGGCAGCCGCTGCAAACAATTCGCACTGCACAGT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCGCACTCCTCCGATCTaGGCGTTGAAAGCAATTCCG +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTRTPPI*ALKAIP
Trigger: CGGAATTGCTTTCAACGCCAAGATCGGAGGAGTGCG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCAGGTCAGAAACGGATaGGCTTCCAGGGCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRQVRNG*ASRASA
Trigger: TGCGCTGGCCCTGGAAGCCAATCCGTTTCTGACCTG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAAGCAGGACTCACAGTaGGGGGCACACTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLKQDSQ*GAHFLQ
Trigger: CTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCTT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAATTGAATCCTGGGCCATaGCACGTCAAACAACTGATA +
Preference number: 5 (lower is better)
Translates to: LSKALRSMKPARWLVTCKLNPGP*HVKQLI
Trigger: TATCAGTTGTTTGACGTGCAATGGCCCAGGATTCAA...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376752.8
ENST00000455778.1
CDS-3UTR CAA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTCCCAGGACTCTTCCGTaGCATCCTTGCAAATGGCTC +
Preference number: 5 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVPRTLP*HPCKWL
Trigger: GAGCCATTTGCAAGGATGCAACGGAAGAGTCCTGGG...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AATGCCCTCAGGTCCAGTTTTCTGTCATTTCCCCCAATGGTGGACTCAAGCATGTTCCGTTGGCACAGATaGTTCTTTTTCACAAGCATA +
Preference number: 5 (lower is better)
Translates to: NALRSSFLSFPPMVDSSMFRWHR*FFFTSI
Trigger: TATGCTTGTGAAAAAGAACAATCTGTGCCAACGGAA...CATGCTTGAGTCCACCATTGGGGGAAATGACAGAAAACTGGACCTGAGGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CACCTGCATGGTCAGTGGGAAATGGAATGCACGCTGGTAGACCCCAATGAATTTTTGAAGAACCTTCCGTaGGCACAGATTGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: HLHGQWEMECTLVDPNEFLKNLP*AQIVLF
Trigger: AAAAAGAACAATCTGTGCCAACGGAAGGTTCTTCAA...AAATTCATTGGGGTCTACCAGCGTGCATTCCATTTCCCACTGACCATGCAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CAGCATCTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCTTGGCATCAAATGCTTaGGTCATACAATACTGTCTC +
Preference number: 5 (lower is better)
Translates to: QHLLSKALRSMKPARWLVLASNA*VIQYCL
Trigger: GAGACAGTATTGTATGACCAAAGCATTTGATGCCAA...GACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTACTATCACACGCCTaGCATTCCACTTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTLLSHA*HSTSSL
Trigger: CAGTGAGGAAGTGGAATGCAAGGCGTGTGATAGTAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCACAAGAATGGCAGTaGGTGGCGTTTCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSQEWQ*VAFPSH
Trigger: ATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACACAAGGTGCAGTTCTaGGCCCCTGGTCCCTTGCAT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLHKVQF*APGPLH
Trigger: ATGCAAGGGACCAGGGGCCAAGAACTGCACCTTGTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAATGAACAGAGCTGTCTaGAAATGCTCAGTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTMNRAV*KCSVAG
Trigger: GCCTGCAACTGAGCATTTCAAGACAGCTCTGTTCAT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGTGGAATGGTGGTGTaGGTGGGGGAGTGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTSGMVV*VGECLF
Trigger: AAACAGGCACTCCCCCACCAACACCACCATTCCACT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS TCA 90 bp CCATGCTCATCAACATATTCTCCATCCTTGCAAATGGCTCCCATTTaGCACATTCCTAAGTCTAAGAGATACCCACTAGGGCAGCTTGTA +
Preference number: 5 (lower is better)
Translates to: PCSSTYSPSLQMAPI*HIPKSKRYPLGQLV
Trigger: TACAAGCTGCCCTAGTGGGTATCTCTTAGACTTAGGAATGTGTCAAATGGGAGCCATTTGCAAGGATGGAGAATATGTTGATGAGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTGATGAATCCGTACTaGCTGGCGATACGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTLMNPY*LAIRLA
Trigger: GGCCAACCGTATCGCCAGCAAGTACGGATTCATCAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTGATGAATCCGTACTaGCTGGCGATACGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLMNPY*LAIRLA
Trigger: GGCCAACCGTATCGCCAGCAAGTACGGATTCATCAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATTTTACCACTTGCTGTaGGATCCATTCCACCTTTGG +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTFYHLL*DPFHLW
Trigger: CCAAAGGTGGAATGGATCCAACAGCAAGTGGTAAAA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAGCTTGTTCTCGTTGCTaGCATCATAACGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: ARWLVTCKANEVTNEALIACSRC*HHNEAL
Trigger: CAATGCCTCGTTATGATGCAAGCAACGAGAACAAGC...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGCGAGTCCCATGCTaGTTCTCGTTGCTTGCATCA +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTQRVPC*FSLLAS
Trigger: TGATGCAAGCAACGAGAACAAGCATGGGACTCGCTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGCAGTGCGAATTGTTaGCAGCGGCTGCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLCSANC*QRLPLL
Trigger: GAGAAGTGGCAGCCGCTGCAAACAATTCGCACTGCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGGAGCAGTGGTCTTaGCTCCTTCCACCATTTCCA +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTQEQWS*LLPPFP
Trigger: TGGAAATGGTGGAAGGAGCAAAGACCACTGCTCCTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGCGGATTGTCTTGATTaGTCGGTCTGTGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTADCLD*SVCALH
Trigger: GTGGAGAGCACAGACCGACAAATCAAGACAATCCGC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TGCACGCTGGTAGACCCCAATGAATTTTGTTGTCATGTTGATGGTTATTCGTCTTCGGAAATTCATTGGTaGGTGAATATGGCTGCACGG +
Preference number: 5 (lower is better)
Translates to: CTLVDPNEFCCHVDGYSSSEIHW*VNMAAR
Trigger: CCGTGCAGCCATATTCACCAACCAATGAATTTCCGA...AGACGAATAACCATCAACATGACAACAAAATTCATTGGGGTCTACCAGCGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGGCAGTCCTGGCCGTaGAAATACCGTCCATCTTCA +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTWQSWP*KYRPSS
Trigger: TGAAGATGGACGGTATTTCAACGGCCAGGACTGCCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTTCTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAGAAGGTTAGAGCATTaGTTGAGTCTCCAAACTTTG +
Preference number: 5 (lower is better)
Translates to: LLSKALRSMKPARWLVTCRRLEH*LSLQTL
Trigger: CAAAGTTTGGAGACTCAACAAATGCTCTAACCTTCT...ACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGTCAGTAAAAGTGGATTaGGATTTAACAATGGGTCAC +
Preference number: 5 (lower is better)
Translates to: EFQGSWISLSSSMYLCILSVKVD*DLTMGH
Trigger: GTGACCCATTGTTAAATCCAAATCCACTTTTACTGA...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp GAATTTCAGGGGAGCTGGATCAGCCTCAGCTCATCTATGTACCTCTGCATTCTGGGAATAACATTGATTTaGGCCAGTATCAGTTACAAC +
Preference number: 5 (lower is better)
Translates to: EFQGSWISLSSSMYLCILGITLI*ASISYN
Trigger: GTTGTAACTGATACTGGCCAAAATCAATGTTATTCC...CAGAATGCAGAGGTACATAGATGAGCTGAGGCTGATCCAGCTCCCCTGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAACAGGTCTGTGTGCTTaGCTCTACATAGTAATGGTC +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTTGLCA*LYIVMV
Trigger: GACCATTACTATGTAGAGCAAAGCACACAGACCTGT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACATCCTTTTCCTTTGCATaGATCACAAGTCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTSFSFA*ITSRMA
Trigger: TGCCATCCGACTTGTGATCAATGCAAAGGAAAAGGA...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGTGGAATGGTGGTGTaGGTGGGGGAGTGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLSGMVV*VGECLF
Trigger: AAACAGGCACTCCCCCACCAACACCACCATTCCACT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACGGTTTTGTGATGGGTaGTTGATGAAGGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTRFCDG*LMKESS
Trigger: AGAGCTTTCCTTCATCAACAACCCATCACAAAACCG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACAGCGAGTCCCATGCTaGTTCTCGTTGCTTGCATCA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLQRVPC*FSLLAS
Trigger: TGATGCAAGCAACGAGAACAAGCATGGGACTCGCTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTGCAGTGCGAATTGTTaGCAGCGGCTGCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRCSANC*QRLPLL
Trigger: GAGAAGTGGCAGCCGCTGCAAACAATTCGCACTGCA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCACTGTGCAGTGCGAATaGTTTGCAGCGGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRTVQCE*FAAAAT
Trigger: AGTGGCAGCCGCTGCAAACAATTCGCACTGCACAGT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACCTCCGATCTTGGCGTaGAAAGCAATTCCGACTGTG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLPPILA*KAIPTV
Trigger: CACAGTCGGAATTGCTTTCAACGCCAAGATCGGAGG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCGCACTCCTCCGATCTaGGCGTTGAAAGCAATTCCG +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRRTPPI*ALKAIP
Trigger: CGGAATTGCTTTCAACGCCAAGATCGGAGGAGTGCG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATGCACGTGCTGGGGGTaGAAGCTAACTGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTCTCWG*KLTDFA
Trigger: AGCAAAATCAGTTAGCTTCAACCCCCAGCACGTGCA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTAGGGCGGATTGTCTaGATTTGTCGGTCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLGRIV*ICRSVL
Trigger: GAGCACAGACCGACAAATCAAGACAATCCGCCCTAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTAGGGCGGATTGTCTaGATTTGTCGGTCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTLGRIV*ICRSVL
Trigger: GAGCACAGACCGACAAATCAAGACAATCCGCCCTAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTTTGCAGGACATGCATaGGTCACCATGGCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTFAGHA*VTMAPK
Trigger: TTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAGCAAATAGAAAGTATCCATATTaGCAGGACATGCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: KALRSMKPARWLVTCKANRKYPY*QDMHWS
Trigger: TGACCAATGCATGTCCTGCAAATATGGATACTTTCT...ATTTGCTTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAAAAATACAGGACCTCTaGGGAACTTTTGACTCCAGG +
Preference number: 5 (lower is better)
Translates to: ARWLVTCKANEVTNEALIKIQDL*GTFDSR
Trigger: CCTGGAGTCAAAAGTTCCCAAGAGGTCCTGTATTTT...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTGACCTTGCTTTAGGCTaGTGCTTGCATTTGTCCACG +
Preference number: 5 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVDLALG*CLHLST
Trigger: CGTGGACAAATGCAAGCACAAGCCTAAAGCAAGGTC...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGCCCTTCATGCATCTaGTGCAGACATGCACGCTGT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLSPSCI*CRHARC
Trigger: ACAGCGTGCATGTCTGCACAAGATGCATGAAGGGCT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGGGAGTCTCACTATGTaGTCCAAGGCTGATGTCGAA +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTGSLTM*SKADVE
Trigger: TTCGACATCAGCCTTGGACAACATAGTGAGACTCCC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGGAGTCTCACTATGTaGTCCAAGGCTGATGTCGAA +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTGSLTM*SKADVE
Trigger: TTCGACATCAGCCTTGGACAACATAGTGAGACTCCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTTGATGAATCCGTACTaGCTGGCGATACGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLMNPY*LAIRLA
Trigger: GGCCAACCGTATCGCCAGCAAGTACGGATTCATCAA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGGCAGGGATGTGTATaGTCACTGCAGTGCATATAC +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTWQGCV*SLQCIY
Trigger: GTATATGCACTGCAGTGACAATACACATCCCTGCCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATGGCAGGGATGTGTATaGTCACTGCAGTGCATATAC +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTWQGCV*SLQCIY
Trigger: GTATATGCACTGCAGTGACAATACACATCCCTGCCA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACAGAGCATCGTAGTTTaGCATCAGATCTGGATGGGT +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTQSIVV*HQIWMG
Trigger: ACCCATCCAGATCTGATGCAAAACTACGATGCTCTG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCAGAGCATCGTAGTTTaGCATCAGATCTGGATGGGT +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTQSIVV*HQIWMG
Trigger: ACCCATCCAGATCTGATGCAAAACTACGATGCTCTG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACATTCACGTCGCAACTaGCCAGAGCATCGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTHSRRN*PEHRSF
Trigger: AAAACTACGATGCTCTGGCAAGTTGCGACGTGAATG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCATTCACGTCGCAACTaGCCAGAGCATCGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTHSRRN*PEHRSF
Trigger: AAAACTACGATGCTCTGGCAAGTTGCGACGTGAATG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCATCATAACGAGGCATaGGGTCCAAGTCATTCCCAT +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTHHNEA*GPSHSH
Trigger: ATGGGAATGACTTGGACCCAATGCCTCGTTATGATG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGCTTGTTCTCGTTGCTaGCATCATAACGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTACSRC*HHNEAL
Trigger: CAATGCCTCGTTATGATGCAAGCAACGAGAACAAGC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCAGCGAGTCCCATGCTaGTTCTCGTTGCTTGCATCA +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRQRVPC*FSLLAS
Trigger: TGATGCAAGCAACGAGAACAAGCATGGGACTCGCTG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCCTCCGATCTTGGCGTaGAAAGCAATTCCGACTGTG +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRPPILA*KAIPTV
Trigger: CACAGTCGGAATTGCTTTCAACGCCAAGATCGGAGG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGCACGTGCTGGGGGTaGAAGCTAACTGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLCTCWG*KLTDFA
Trigger: AGCAAAATCAGTTAGCTTCAACCCCCAGCACGTGCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCAGGAGCAGTGGTCTTaGCTCCTTCCACCATTTCCA +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRQEQWS*LLPPFP
Trigger: TGGAAATGGTGGAAGGAGCAAAGACCACTGCTCCTG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGCGGATTGTCTTGATTaGTCGGTCTGTGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRADCLD*SVCALH
Trigger: GTGGAGAGCACAGACCGACAAATCAAGACAATCCGC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCGGAAATTCATTGGTaGGTGAATATGGCTGCACGG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSEIHW*VNMAAR
Trigger: CCGTGCAGCCATATTCACCAACCAATGAATTTCCGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GCAAGATGGCTGGTCACTTGTAAAGCAAATGAGGTCACCAATGAAGCTTTGATAACTTTCGGAAATTCATaGGTTGGTGAATATGGCTGC +
Preference number: 5 (lower is better)
Translates to: ARWLVTCKANEVTNEALITFGNS*VGEYGC
Trigger: GCAGCCATATTCACCAACCAATGAATTTCCGAAAGT...TATCAAAGCTTCATTGGTGACCTCATTTGCTTTACAAGTGACCAGCCATCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp CTAAGTAAGGCTCTCAGAAGCATGAAGCCTGCAAGATGGCTGGTCACTTGTAAAAATTCAGTACATGTCTaGCAGTTTTCACTGCATTTC +
Preference number: 5 (lower is better)
Translates to: LSKALRSMKPARWLVTCKNSVHV*QFSLHF
Trigger: GAAATGCAGTGAAAACTGCAAGACATGTACTGAATT...TTTACAAGTGACCAGCCATCTTGCAGGCTTCATGCTTCTGAGAGCCTTACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTACAGCTTGTACAGTTCTaGAATCCTGGGCCATTGCAC +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLQLVQF*NPGPLH
Trigger: GTGCAATGGCCCAGGATTCAAGAACTGTACAAGCTG...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTCATAGTCTGGGTCTaGGACTTCACCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFIVWV*DFTLST
Trigger: TGTGGACAAGGTGAAGTCCAAGACCCAGACTATGAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTACTATCACACGCCTaGCATTCCACTTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLLSHA*HSTSSL
Trigger: CAGTGAGGAAGTGGAATGCAAGGCGTGTGATAGTAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCACCACAGATAGGTTaGCAGTGGACACAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSPQIG*QWTQLH
Trigger: ATGAAGCTGTGTCCACTGCAAACCTATCTGTGGTGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCTGCATCTGGCATTTTTaGCAAAGATCGGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTCIWHF*QRSAPE
Trigger: CTCTGGAGCCGATCTTTGCAAAAAATGCCAGATGCA...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCAGGCGTGCACTCTTaGCATGTTTTCTCATGGATG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSGVHS*HVFSWM
Trigger: CATCCATGAGAAAACATGCAAAGAGTGCACGCCTGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTTGCAGGCCTAACCTaGCTTGTTCGAAGGATGCAT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLVAGLT*LVRRMH
Trigger: ATGCATCCTTCGAACAAGCAAGGTTAGGCCTGCAAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCATGAACAGAGCTGTCTaGAAATGCTCAGTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTMNRAV*KCSVAG
Trigger: GCCTGCAACTGAGCATTTCAAGACAGCTCTGTTCAT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAAGAGCCCTCTTTTCTaGGCCCTTACAAAACAAATT +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTKSPLF*ALTKQI
Trigger: AATTTGTTTTGTAAGGGCCAAGAAAAGAGGGCTCTT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp CAAAGAAATCTAAGATGGCTGCTCAGCCTTGAAATGTACATGTTTTaGAGCAAAGTTGTTGAAGAACCTTCCGTTGGCACAGATTGTTCT +
Preference number: 5 (lower is better)
Translates to: QRNLRWLLSLEMYMF*SKVVEEPSVGTDCS
Trigger: AGAACAATCTGTGCCAACGGAAGGTTCTTCAACAACTTTGCTGCAAAACATGTACATTTCAAGGCTGAGCAGCCATCTTAGATTTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCCCTATCTGTCCTATGTaGATGAATCCGTACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTPICPM*MNPYLL
Trigger: CAGCAAGTACGGATTCATCAACATAGGACAGATAGG...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACACCTATCTGTCCTATGTaGATGAATCCGTACTTGCTG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTPICPM*MNPYLL
Trigger: CAGCAAGTACGGATTCATCAACATAGGACAGATAGG...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTGCACGTGCTGGGGGTaGAAGCTAACTGATTTTGCT +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRCTCWG*KLTDFA
Trigger: AGCAAAATCAGTTAGCTTCAACCCCCAGCACGTGCA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTTAGGGCGGATTGTCTaGATTTGTCGGTCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRLGRIV*ICRSVL
Trigger: GAGCACAGACCGACAAATCAAGACAATCCGCCCTAA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACAAATTCAGTACATGTCTaGCAGTTTTCACTGCATTTC +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTNSVHV*QFSLHF
Trigger: GAAATGCAGTGAAAACTGCAAGACATGTACTGAATT...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTGAATCCTGGGCCATaGCACGTCAAACAACTGATA +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTLNPGP*HVKQLI
Trigger: TATCAGTTGTTTGACGTGCAATGGCCCAGGATTCAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTCATAGTCTGGGTCTaGGACTTCACCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLFIVWV*DFTLST
Trigger: TGTGGACAAGGTGAAGTCCAAGACCCAGACTATGAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAATGAAGTGCACAGAGTaGCAGATCCATTGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTMKCTE*QIHCRF
Trigger: AAACCTGCAATGGATCTGCAACTCTGTGCACTTCAT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAGAAGATATGCACCTTaGGGACATGAAGTGCACAGA +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTRRYAP*GHEVHR
Trigger: TCTGTGCACTTCATGTCCCAAAGGTGCATATCTTCT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATGCATCTGGCATTTTTaGCAAAGATCGGCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLCIWHF*QRSAPE
Trigger: CTCTGGAGCCGATCTTTGCAAAAAATGCCAGATGCA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCACAAGAATGGCAGTaGGTGGCGTTTCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLSQEWQ*VAFPSH
Trigger: ATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATCAGGCGTGCACTCTTaGCATGTTTTCTCATGGATG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLSGVHS*HVFSWM
Trigger: CATCCATGAGAAAACATGCAAAGAGTGCACGCCTGA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCACAGGTCTGTGTGCTTaGCTCTACATAGTAATGGTC +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTTGLCA*LYIVMV
Trigger: GACCATTACTATGTAGAGCAAAGCACACAGACCTGT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATCCTTTTCCTTTGCATaGATCACAAGTCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTSFSFA*ITSRMA
Trigger: TGCCATCCGACTTGTGATCAATGCAAAGGAAAAGGA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTGGCCTGGAGTCAATaGATAAGAGCCCTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLVAWSQ*IRALFS
Trigger: AGAAAAGAGGGCTCTTATCAATTGACTCCAGGCCAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGCCAACATCATTTTGCATAGCAAGAGCCCTTCTCTGTGTTACAATCTGGACACCTGTAAGGTCTATTTaGACAAGGAAATCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: LPTSFCIARALLCVTIWTPVRSI*TRKSVR
Trigger: TCTTACAGATTTCCTTGTCAAAATAGACCTTACAGG...TGTCCAGATTGTAACACAGAGAAGGGCTCTTGCTATGCAAAATGATGTTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp ACCCATCCCTACATTCTGTACAGTTATGGAATTCAGTACATGTCTTaGAGTTTTCACTGCATTTCCGGCAAAGATTTTTCTTGGTATCCT +
Preference number: 5 (lower is better)
Translates to: THPYILYSYGIQYMS*SFHCISGKDFSWYP
Trigger: AGGATACCAAGAAAAATCTTTGCCGGAAATGCAGTGAAAACTGCAAGACATGTACTGAATTCCATAACTGTACAGAATGTAGGGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTTTACCACTTGCTGTaGGATCCATTCCACCTTTGG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLFYHLL*DPFHLW
Trigger: CCAAAGGTGGAATGGATCCAACAGCAAGTGGTAAAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTGGCAGGGATGTGTATaGTCACTGCAGTGCATATAC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRWQGCV*SLQCIY
Trigger: GTATATGCACTGCAGTGACAATACACATCCCTGCCA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCAGAGCATCGTAGTTTaGCATCAGATCTGGATGGGT +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRQSIVV*HQIWMG
Trigger: ACCCATCCAGATCTGATGCAAAACTACGATGCTCTG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCATTCACGTCGCAACTaGCCAGAGCATCGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRHSRRN*PEHRSF
Trigger: AAAACTACGATGCTCTGGCAAGTTGCGACGTGAATG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCATCATAACGAGGCATaGGGTCCAAGTCATTCCCAT +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRHHNEA*GPSHSH
Trigger: ATGGGAATGACTTGGACCCAATGCCTCGTTATGATG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCGCTTGTTCTCGTTGCTaGCATCATAACGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRACSRC*HHNEAL
Trigger: CAATGCCTCGTTATGATGCAAGCAACGAGAACAAGC...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTCGGAAATTCATTGGTaGGTGAATATGGCTGCACGG +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRSEIHW*VNMAAR
Trigger: CCGTGCAGCCATATTCACCAACCAATGAATTTCCGA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCACTTTCGGAAATTCATaGGTTGGTGAATATGGCTGC +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTTFGNS*VGEYGC
Trigger: GCAGCCATATTCACCAACCAATGAATTTCCGAAAGT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAACTTTCGGAAATTCATaGGTTGGTGAATATGGCTGC +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTTFGNS*VGEYGC
Trigger: GCAGCCATATTCACCAACCAATGAATTTCCGAAAGT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTGAATCCTGGGCCATaGCACGTCAAACAACTGATA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLLNPGP*HVKQLI
Trigger: TATCAGTTGTTTGACGTGCAATGGCCCAGGATTCAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TTCTGGCTGTTTAGCACTAAACACCCAGTTATAAAAGGTAGGCTTGTTGTAGTTTGTTTTGCAGCAAAGTaGTTGAAGAACCTTCCGTTG +
Preference number: 5 (lower is better)
Translates to: FWLFSTKHPVIKGRLVVVCFAAK*LKNLPL
Trigger: CAACGGAAGGTTCTTCAACAACTTTGCTGCAAAACA...AACTACAACAAGCCTACCTTTTATAACTGGGTGTTTAGTGCTAAACAGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAACATTCTCCCATTTCTaGGTCACCATAGAATCCAGG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLTFSHF*VTIESR
Trigger: CCTGGATTCTATGGTGACCAAGAAATGGGAGAATGT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATGAAGTGCACAGAGTaGCAGATCCATTGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLMKCTE*QIHCRF
Trigger: AAACCTGCAATGGATCTGCAACTCTGTGCACTTCAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGAAGATATGCACCTTaGGGACATGAAGTGCACAGA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLRRYAP*GHEVHR
Trigger: TCTGTGCACTTCATGTCCCAAAGGTGCATATCTTCT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTCACACAGGTTGTGTaGAGAAGAAGGCTGTTCATG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLFTQVV*RRRLFM
Trigger: CATGAACAGCCTTCTTCTCAACACAACCTGTGTGAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACATTCCAACTCTTTCTATaGAGAGTCCACGGTTTTGTG +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTFQLFL*RVHGFV
Trigger: CACAAAACCGTGGACTCTCAATAGAAAGAGTTGGAA...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCGGGGAATTACTTAGCTaGTTATCTGGTAGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTGELLS*LSGSRC
Trigger: ACACCTACTACCAGATAACAAGCTAAGTAATTCCCC...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCCCTATCTGTCCTATGTaGATGAATCCGTACTTGCTG +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRPICPM*MNPYLL
Trigger: CAGCAAGTACGGATTCATCAACATAGGACAGATAGG...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCTTTTACCACTTGCTGTaGGATCCATTCCACCTTTGG +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRFYHLL*DPFHLW
Trigger: CCAAAGGTGGAATGGATCCAACAGCAAGTGGTAAAA...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGAAAGTATCCATATTaGCAGGACATGCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTRKYPY*QDMHWS
Trigger: TGACCAATGCATGTCCTGCAAATATGGATACTTTCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAGTGGCATGGATGGCATaGGTTCTCAAATTCAAATTT +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTVAWMA*VLKFKF
Trigger: AAATTTGAATTTGAGAACCAATGCCATCCATGCCAC...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAGAGTTGCAGATCCATaGCAGGTTTTACAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTRVADP*QVLQEE
Trigger: TTCTTCTTGTAAAACCTGCAATGGATCTGCAACTCT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAAACCAACAACTCCTTaGTACCTCCATTATCCCCAA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLKPTTP*YLHYPQ
Trigger: TTGGGGATAATGGAGGTACAAAGGAGTTGTTGGTTT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGGGGAATTACTTAGCTaGTTATCTGGTAGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLGELLS*LSGSRC
Trigger: ACACCTACTACCAGATAACAAGCTAAGTAATTCCCC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS GCA 90 bp ATTCTGTACAGTTATGGAATTCAGTACATGTCTTGCAGTTTTCACTaGATTTCCGGCAAAGATTTTTCTTGGTATCCTGATATGACCCAT +
Preference number: 5 (lower is better)
Translates to: ILYSYGIQYMSCSFH*ISGKDFSWYPDMTH
Trigger: ATGGGTCATATCAGGATACCAAGAAAAATCTTTGCCGGAAATGCAGTGAAAACTGCAAGACATGTACTGAATTCCATAACTGTACAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp GTAAGCGAACAATATGTCCCAGATTACAGATTAACTATATTATGGTACAATCGCACTTTCGGAAATTCATaGGTTGGTGAATATGGCTGC +
Preference number: 5 (lower is better)
Translates to: VSEQYVPDYRLTILWYNRTFGNS*VGEYGC
Trigger: GCAGCCATATTCACCAACCAATGAATTTCCGAAAGT...GCGATTGTACCATAATATAGTTAATCTGTAATCTGGGACATATTGTTCGCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAGAAAGTATCCATATTaGCAGGACATGCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLRKYPY*QDMHWS
Trigger: TGACCAATGCATGTCCTGCAAATATGGATACTTTCT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAGTGGCATGGATGGCATaGGTTCTCAAATTCAAATTT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLVAWMA*VLKFKF
Trigger: AAATTTGAATTTGAGAACCAATGCCATCCATGCCAC...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAATATCTCTTTTGATTaGAACTTTCCACCTTCGTCG +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTNISFD*NFPPSS
Trigger: CGACGAAGGTGGAAAGTTCAAATCAAAAGAGATATT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAAGAGCCCTCTTTTCTaGGCCCTTACAAAACAAATT +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLKSPLF*ALTKQI
Trigger: AATTTGTTTTGTAAGGGCCAAGAAAAGAGGGCTCTT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTATTTTGTGATGGGTTGTaGATGAAGGAAAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLFCDGL*MKESSE
Trigger: TTCAGAGCTTTCCTTCATCAACAACCCATCACAAAA...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp TCCATTTCTAGTACTGCCTGTAAGGTCTATTTTGACAAGGAAATCTGTAAGACCAAAAACTGTCCTCAGTaGCATGAATCCAAGAATACA +
Preference number: 5 (lower is better)
Translates to: SISSTACKVYFDKEICKTKNCPQ*HESKNT
Trigger: TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTT...GGTCTTACAGATTTCCTTGTCAAAATAGACCTTACAGGCAGTACTAGAAATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp CTGTGTTACAATCTGGACAAAAACTGTCCTCAGTTGCATGAATCCAAGAATACAAAAAACTGTCCTCAGTaGCATGAATCCAAGAATACA +
Preference number: 5 (lower is better)
Translates to: LCYNLDKNCPQLHESKNTKNCPQ*HESKNT
Trigger: TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTT...TGTATTCTTGGATTCATGCAACTGAGGACAGTTTTTGTCCAGATTGTAACACAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAATTGATAAAGCTAGCTaGGTCTTTGAGTGTAGGAAG +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLIDKAS*VFECRK
Trigger: CTTCCTACACTCAAAGACCAAGCTAGCTTTATCAAT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674117.1
CDS-3UTR CAA 90 bp AATGCCTCTGAATTTTATCCTTGCTCTTCAATTACGGTTGAACAGGAACTGTTAAATTCAGTACATGTCTaGCAGTTTTCACTGCATTTC +
Preference number: 5 (lower is better)
Translates to: NASEFYPCSSITVEQELLNSVHV*QFSLHF
Trigger: GAAATGCAGTGAAAACTGCAAGACATGTACTGAATT...TAACAGTTCCTGTTCAACCGTAATTGAAGAGCAAGGATAAAATTCAGAGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp TCTCGCTCCTCCCGGGGCCCCCGAGCGCGGCGGAGATaGCCAGCGGGAGCGGTACAGGCAGCGACCGGGCGC +
Preference number: 6 (lower is better)
Translates to: SRSSRGPRARRR*PAGAVQAATGR
Trigger: GCGCCCGGTCGCTGCCTGTACCGCTCCCGCTGGTCATCTCCGCCGCGCTCGGGGGCCCCGGGAGGAGCGAGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp AGCGACCGGGCGCCCCCTCTGCTGGCCCGGGCTCCAAACGCTCGCTaGCTCGCTCCCAGCGCTCCCTCCGGCTCCGAGCAGCGCGCGAGG +
Preference number: 6 (lower is better)
Translates to: SDRAPPLLARAPNAR*LAPSAPSGSEQRAR
Trigger: CCTCGCGCGCTGCTCGGAGCCGGAGGGAGCGCTGGGAGCGAGCAAGCGAGCGTTTGGAGCCCGGGCCAGCAGAGGGGGCGCCCGGTCGCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp CGCCCCCTCTGCTGGCCCGGGCTCCAAACGCTCGCTTaGTCGCTCCCAGCGCTCCCTCCGGCTCCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: RPLCWPGLQTLA*SLPALPPAPSS
Trigger: GCTGCTCGGAGCCGGAGGGAGCGCTGGGAGCGAGCAAGCGAGCGTTTGGAGCCCGGGCCAGCAGAGGGGGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp GCGGGAGCGGTACAGGCAGCGACCGGGCGCCCCCTCTaGTGGCCCGGGCTCCAAACGCTCGCTTGCTCGCTC +
Preference number: 6 (lower is better)
Translates to: AGAVQAATGRPL*WPGLQTLACSL
Trigger: GAGCGAGCAAGCGAGCGTTTGGAGCCCGGGCCAGCAGAGGGGGCGCCCGGTCGCTGCCTGTACCGCTCCCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TGCTCCCAGCTCTCCGGCCCGTGGGGCGCTCGGCGATaGTCCCCGGCTCGGACGCAGGAGGAGGCTGAGTGG +
Preference number: 6 (lower is better)
Translates to: CSQLSGPWGARR*SPARTQEEAEW
Trigger: CCACTCAGCCTCCTCCTGCGTCCGAGCCGGGGAGCATCGCCGAGCGCCCCACGGGCCGGAGAGCTGGGAGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp GCGCCCCCTCTGCTGGCCCGGGCTCCAAACGCTCGCTaGCTCGCTCCCAGCGCTCCCTCCGGCTCCGAGCAG +
Preference number: 6 (lower is better)
Translates to: APPLLARAPNAR*LAPSAPSGSEQ
Trigger: CTGCTCGGAGCCGGAGGGAGCGCTGGGAGCGAGCAAGCGAGCGTTTGGAGCCCGGGCCAGCAGAGGGGGCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp CAGCGGCTCCCCCAGCCCATGGTCCCGGCGCCTCGCTaGTCCCTCGCTCGCTGGCTGGTTCCGCGCACTAAG +
Preference number: 6 (lower is better)
Translates to: QRLPQPMVPAPR*SLARWLVPRTK
Trigger: CTTAGTGCGCGGAACCAGCCAGCGAGCGAGGGAGCAGCGAGGCGCCGGGACCATGGGCTGGGGGAGCCGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp AGGCTGAGTGGGGCGGGCGTCCTCCGCAGTTGGGTTTCGCCCGGCTaGGCTCCCGGACTCTCCGACTCGGTCTCGCTCCTCCCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: RLSGAGVLRSWVSPG*APGLSDSVSLLPGP
Trigger: GGGCCCCGGGAGGAGCGAGACCGAGTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCCGCCCCACTCAGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp CGAGCCTTACGCCGGCTCCTAGACCATCCCTGGGGCTaGCGGGACCTGTGCTCCCAGCTCTCCGGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: RALRRLLDHPWG*RDLCSQLSGPW
Trigger: CCACGGGCCGGAGAGCTGGGAGCACAGGTCCCGGCAGCCCCAGGGATGGTCTAGGAGCCGGCGTAAGGCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GGGCGGGCGTCCTCCGCAGTTGGGTTTCGCCCGGCTTaGCTCCCGGACTCTCCGACTCGGTCTCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GRASSAVGFRPA*LPDSPTRSRSS
Trigger: GGAGGAGCGAGACCGAGTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp GGGGCGGGCGTCCTCCGCAGTTGGGTTTCGCCCGGCTaGGCTCCCGGACTCTCCGACTCGGTCTCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GAGVLRSWVSPG*APGLSDSVSLL
Trigger: GAGGAGCGAGACCGAGTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCCGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp GCTCGGACGCAGGAGGAGGCTGAGTGGGGCGGGCGTCCTCCGCAGTaGGGTTTCGCCCGGCTTGGCTCCCGGACTCTCCGACTCGGTCTC +
Preference number: 6 (lower is better)
Translates to: ARTQEEAEWGGRPPQ*GFARLGSRTLRLGL
Trigger: GAGACCGAGTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCCGCCCCACTCAGCCTCCTCCTGCGTCCGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp AGGAGGAGGCTGAGTGGGGCGGGCGTCCTCCGCAGTTaGGTTTCGCCCGGCTTGGCTCCCGGACTCTCCGAC +
Preference number: 6 (lower is better)
Translates to: RRRLSGAGVLRS*VSPGLAPGLSD
Trigger: GTCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCCGCCCCACTCAGCCTCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GAGCAGCGAGCCTTACGCCGGCTCCTAGACCATCCCTaGGGCTGCCGGGACCTGTGCTCCCAGCTCTCCGGC +
Preference number: 6 (lower is better)
Translates to: EQRALRRLLDHP*GCRDLCSQLSG
Trigger: GCCGGAGAGCTGGGAGCACAGGTCCCGGCAGCCCCAGGGATGGTCTAGGAGCCGGCGTAAGGCTCGCTGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp CAGGAGGAGGCTGAGTGGGGCGGGCGTCCTCCGCAGTaGGGTTTCGCCCGGCTTGGCTCCCGGACTCTCCGA +
Preference number: 6 (lower is better)
Translates to: QEEAEWGGRPPQ*GFARLGSRTLR
Trigger: TCGGAGAGTCCGGGAGCCAAGCCGGGCGAAACCCAACTGCGGAGGACGCCCGCCCCACTCAGCCTCCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp ACAGGCAGTCTGTGGGCCGTGGGCCCTGGCACCCCTTaGAGCTCCTGTTGCACCTCTCACACCGGCCAGTGG +
Preference number: 6 (lower is better)
Translates to: TGSLWAVGPGTP*SSCCTSHTGQW
Trigger: CCACTGGCCGGTGTGAGAGGTGCAACAGGAGCTGCAAGGGGTGCCAGGGCCCACGGCCCACAGACTGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp GCACCCGGGAGCATCCTCATCCCAGTACTCGGAGGGTaGGCACTTCTCGTTGGCCATGCAGCTCCCACGAGG +
Preference number: 6 (lower is better)
Translates to: APGSILIPVLGG*ALLVGHAAPTR
Trigger: CCTCGTGGGAGCTGCATGGCCAACGAGAAGTGCTCACCCTCCGAGTACTGGGATGAGGATGCTCCCGGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp CCTTCCCTGCACTGGAGCAGGCACTCTTTTCCTAGCTaGAACCAGCCCGGTCGGCAGGAGTGGCACTGCCTG +
Preference number: 6 (lower is better)
Translates to: PSLHWSRHSFPS*NQPGRQEWHCL
Trigger: CAGGCAGTGCCACTCCTGCCGACCGGGCTGGTTCCAGCTAGGAAAAGAGTGCCTGCTCCAGTGCAGGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp CCGTGGTGTCCTGGCAGTCACAGCACTCCTGGGCACTaGGGGGATCAGAGGTGTTGCAGCAGTGGAGGCAGT +
Preference number: 6 (lower is better)
Translates to: PWCPGSHSTPGH*GDQRCCSSGGS
Trigger: ACTGCCTCCACTGCTGCAACACCTCTGATCCCCCCAGTGCCCAGGAGTGCTGTGACTGCCAGGACACCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp TCCTCCGCCGGCCCCATGCAGTGGAAGCACTTAACATGGCAGGGCTaGCACCCGGGAGCATCCTCATCCCAGTACTCGGAGGGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: SSAGPMQWKHLTWQG*HPGASSSQYSEGEH
Trigger: GTGCTCACCCTCCGAGTACTGGGATGAGGATGCTCCCGGGTGCAAGCCCTGCCATGTTAAGTGCTTCCACTGCATGGGGCCGGCGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GCCCCAGCACAAGTGGCGCAGAAGCGGTGGCAGGGCTaGCAGTCCTGGCCGTTGAAATACCGTCCATCTTCA +
Preference number: 6 (lower is better)
Translates to: APAQVAQKRWQG*QSWPLKYRPSS
Trigger: TGAAGATGGACGGTATTTCAACGGCCAGGACTGCCAGCCCTGCCACCGCTTCTGCGCCACTTGTGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp CGCAGAAGCGGTGGCAGGGCTGGCAGTCCTGGCCGTTaGAATACCGTCCATCTTCACAGGAGACAGAGCACC +
Preference number: 6 (lower is better)
Translates to: RRSGGRAGSPGR*NTVHLHRRQST
Trigger: GGTGCTCTGTCTCCTGTGAAGATGGACGGTATTTCAACGGCCAGGACTGCCAGCCCTGCCACCGCTTCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp AGTGGTCTGGTCCTGGCCCGTCACAGCCAACCTCACTaGACTCAGGGTCGCAGGGACCTGCATAATCCTCTG +
Preference number: 6 (lower is better)
Translates to: SGLVLARHSQPH*TQGRRDLHNPL
Trigger: CAGAGGATTATGCAGGTCCCTGCGACCCTGAGTGCAGTGAGGTTGGCTGTGACGGGCCAGGACCAGACCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp CGTCCATGTGCAGCACCAGGTTGGCAGGGCACAAGGTaGAGTTCTTGGCCCCTGGTCCCTTGCATTCCATGC +
Preference number: 6 (lower is better)
Translates to: RPCAAPGWQGTR*SSWPLVPCIPC
Trigger: GCATGGAATGCAAGGGACCAGGGGCCAAGAACTGCACCTTGTGCCCTGCCAACCTGGTGCTGCACATGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp ACGTGCCTCTCGGGGCAGTTTTCCTGGCACACTCCGTaGTGCAGGACGTGGCCTCCTTCACAAGAATGGCAG +
Preference number: 6 (lower is better)
Translates to: TCLSGQFSWHTP*CRTWPPSQEWQ
Trigger: CTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGTGTGCCAGGAAAACTGCCCCGAGAGGCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CAA 72 bp TGCTCCACAGGAGGTGCAGTGGGTAGGGCCACTTCCTaGGCATCTCTGGCAGGTGTGGTGGCATGGATGGCA +
Preference number: 6 (lower is better)
Translates to: CSTGGAVGRATS*ASLAGVVAWMA
Trigger: TGCCATCCATGCCACCACACCTGCCAGAGATGCCAAGGAAGTGGCCCTACCCACTGCACCTCCTGTGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp GGCCCCATGCAGTGGAAGCACTTAACATGGCAGGGCTaGCACCCGGGAGCATCCTCATCCCAGTACTCGGAG +
Preference number: 6 (lower is better)
Translates to: GPMQWKHLTWQG*HPGASSSQYSE
Trigger: CTCCGAGTACTGGGATGAGGATGCTCCCGGGTGCAAGCCCTGCCATGTTAAGTGCTTCCACTGCATGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TTCCAGAATTTGCCCTCCTCCTGGGTCTTGGTGGCATaGACGCACATCCCACGCAGCAGCTGCAGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: FQNLPSSWVLVA*THIPRSSCSPS
Trigger: GGAAGGACTGCAGCTGCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS GCA 72 bp TGCCTCTCGGGGCAGTTTTCCTGGCACACTCCGTGGTaGAGGACGTGGCCTCCTTCACAAGAATGGCAGTTG +
Preference number: 6 (lower is better)
Translates to: CLSGQFSWHTPW*RTWPPSQEWQL
Trigger: CAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGTGTGCCAGGAAAACTGCCCCGAGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS GCA 72 bp CATGGATGCAGTCCTGACACATCTCTGGGCAATGCTTaGATACCCCCTTCACAGCCACGTGCCTCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: HGCSPDTSLGNA*IPPSQPRASRG
Trigger: GCCCCGAGAGGCACGTGGCTGTGAAGGGGGTATGCAAGCATTGCCCAGAGATGTGTCAGGACTGCATCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp CAGGCAGGTGTTCCCCTCAGTGGCATAGTGGCCCTCTaGGCAGCTATCTCCACACTCTCCCTGGTACAGGAA +
Preference number: 6 (lower is better)
Translates to: QAGVPLSGIVAL*AAISTLSLVQE
Trigger: TTCCTGTACCAGGGAGAGTGTGGAGATAGCTGCCCAGAGGGCCACTATGCCACTGAGGGGAACACCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp AGGGCCCCTATCTGTCCTATGTTGATGAATCCGTACTaGCTGGCGATACGGTTGGCCTCCGGGAAGCCCCCG +
Preference number: 6 (lower is better)
Translates to: RAPICPMLMNPY*LAIRLASGKPP
Trigger: CGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCAAGTACGGATTCATCAACATAGGACAGATAGGGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp CATTGGTCACCATGGCTCCCAAAGCAGGACTCACAGTaGGGGGCACACTTCCTGCAGCGCTTCTTGTCGGCG +
Preference number: 6 (lower is better)
Translates to: HWSPWLPKQDSQ*GAHFLQRFLSA
Trigger: CGCCGACAAGAAGCGCTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCTTTGGGAGCCATGGTGACCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp CTTGTGCAGACATGCACGCTGTGGCAAAGCTCACAGTaGTCTGGGCAGGGCAGGCAGGTGTTCCCCTCAGTG +
Preference number: 6 (lower is better)
Translates to: LVQTCTLWQSSQ*SGQGRQVFPSV
Trigger: CACTGAGGGGAACACCTGCCTGCCCTGCCCAGACAACTGTGAGCTTTGCCACAGCGTGCATGTCTGCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp GCAGTGGACACAGCTTCATTCCAGAATTTGCCCTCCTCCTGGGTCTaGGTGGCATGCACGCACATCCCACGCAGCAGCTGCAGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: AVDTASFQNLPSSWV*VACTHIPRSSCSPS
Trigger: GGAAGGACTGCAGCTGCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAATGAAGCTGTGTCCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424854.6
ENST00000674117.1
CDS CAA 90 bp CCTTCATGGAGGAAGAGAGGGTGGCCCGGCTGCATCTGGCATTTTTaGCAAAGATCGGCTCCAGAGCAGATGGCACAGGCCTCCGTACAG +
Preference number: 6 (lower is better)
Translates to: PSWRKRGWPGCIWHF*QRSAPEQMAQASVQ
Trigger: CTGTACGGAGGCCTGTGCCATCTGCTCTGGAGCCGATCTTTGCAAAAAATGCCAGATGCAGCCGGGCCACCCTCTCTTCCTCCATGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CAA 90 bp TCGTCCATGTGCAGCACCAGGTTGGCAGGGCACAAGGTGCAGTTCTaGGCCCCTGGTCCCTTGCATTCCATGCAGCTCTCGTGGCATTTT +
Preference number: 6 (lower is better)
Translates to: SSMCSTRLAGHKVQF*APGPLHSMQLSWHF
Trigger: AAAATGCCACGAGAGCTGCATGGAATGCAAGGGACCAGGGGCCAAGAACTGCACCTTGTGCCCTGCCAACCTGGTGCTGCACATGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp GGAGCAGTGGTCTTTGCTCCTTCCACCATTTCCAGATaGCCAAACAAACACAGAGCCGAGGCCTCTCCGCCC +
Preference number: 6 (lower is better)
Translates to: GAVVFAPSTISR*PNKHRAEASPP
Trigger: GGGCGGAGAGGCCTCGGCTCTGTGTTTGTTTGGGCATCTGGAAATGGTGGAAGGAGCAAAGACCACTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp ACAGTCTTTATGGCAGGGGACACAGTGGCGCGAGTCTaGATAGAAGCCACGGGGACAGGACTGGTGGCACAT +
Preference number: 6 (lower is better)
Translates to: TVFMAGDTVARV*IEATGTGLVAH
Trigger: ATGTGCCACCAGTCCTGTCCCCGTGGCTTCTATGCAGACTCGCGCCACTGTGTCCCCTGCCATAAAGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp GTTGGGGTCGGCCAGTTTTTCATAGCCGGCCTTTGCTaGTGGCTGGACTCGGCCACGAGATTTCTTCCACAC +
Preference number: 6 (lower is better)
Translates to: VGVGQFFIAGLC*WLDSATRFLPH
Trigger: GTGTGGAAGAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp ATTGGTCACCATGGCTCCCAAAGCAGGACTCACAGTTaGGGGCACACTTCCTGCAGCGCTTCTTGTCGGCGT +
Preference number: 6 (lower is better)
Translates to: IGHHGSQSRTHS*GHTSCSASCRR
Trigger: ACGCCGACAAGAAGCGCTGCAGGAAGTGTGCCCCCAACTGTGAGTCCTGCTTTGGGAGCCATGGTGACCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp CAGCTTCATTCCAGAATTTGCCCTCCTCCTGGGTCTTaGTGGCATGCACGCACATCCCACGCAGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: QLHSRICPPPGS*WHARTSHAAAA
Trigger: TGCAGCTGCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAATGAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424854.6
ENST00000674117.1
CDS CCA 72 bp GTGGACACAGCTTCATTCCAGAATTTGCCCTCCTCCTaGGTCTTGGTGGCATGCACGCACATCCCACGCAGC +
Preference number: 6 (lower is better)
Translates to: VDTASFQNLPSS*VLVACTHIPRS
Trigger: GCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAATGAAGCTGTGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424854.6
ENST00000674117.1
CDS CCA 72 bp GGGCAGTTTTCCTGGCACACTCCGTGGTGCAGGACGTaGCCTCCTTCACAAGAATGGCAGTTGGTGGCGTTT +
Preference number: 6 (lower is better)
Translates to: GQFSWHTPWCRT*PPSQEWQLVAF
Trigger: AAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGTGTGCCAGGAAAACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CCA 72 bp GGGGTCGGCCAGTTTTTCATAGCCGGCCTTTGCTGCTaGCTGGACTCGGCCACGAGATTTCTTCCACACTAC +
Preference number: 6 (lower is better)
Translates to: GVGQFFIAGLCC*LDSATRFLPHY
Trigger: GTAGTGTGGAAGAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp CCTATGTTGATGAATCCGTACTTGCTGGCGATACGGTaGGCCTCCGGGAAGCCCCCGGCGATTTTGACTGCC +
Preference number: 6 (lower is better)
Translates to: PMLMNPYLLAIR*ASGKPPAILTA
Trigger: GGCAGTCAAAATCGCCGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCAAGTACGGATTCATCAACATAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp AGGAAGAGAGGGTGGCCCGGCTGCATCTGGCATTTTTaGCAAAGATCGGCTCCAGAGCAGATGGCACAGGCC +
Preference number: 6 (lower is better)
Translates to: RKRGWPGCIWHF*QRSAPEQMAQA
Trigger: GGCCTGTGCCATCTGCTCTGGAGCCGATCTTTGCAAAAAATGCCAGATGCAGCCGGGCCACCCTCTCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CAA 72 bp TCCTCATCCCAGTACTCGGAGGGTGAGCACTTCTCGTaGGCCATGCAGCTCCCACGAGGGTTCATGATCAGG +
Preference number: 6 (lower is better)
Translates to: SSSQYSEGEHFS*AMQLPRGFMIR
Trigger: CCTGATCATGAACCCTCGTGGGAGCTGCATGGCCAACGAGAAGTGCTCACCCTCCGAGTACTGGGATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp CCTATCTGTCCTATGTTGATGAATCCGTACTTGCTGGCGATACGGTaGGCCTCCGGGAAGCCCCCGGCGATTTTGACTGCCCAGTGGTTG +
Preference number: 6 (lower is better)
Translates to: PICPMLMNPYLLAIR*ASGKPPAILTAQWL
Trigger: CAACCACTGGGCAGTCAAAATCGCCGGGGGCTTCCCGGAGGCCAACCGTATCGCCAGCAAGTACGGATTCATCAACATAGGACAGATAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp ATAGTTGTCTGCTCCACAGGAGGTGCAGTGGGTAGGGCCACTTCCTaGGCATCTCTGGCAGGTGTGGTGGCATGGATGGCATTGGTTCTC +
Preference number: 6 (lower is better)
Translates to: IVVCSTGGAVGRATS*ASLAGVVAWMALVL
Trigger: GAGAACCAATGCCATCCATGCCACCACACCTGCCAGAGATGCCAAGGAAGTGGCCCTACCCACTGCACCTCCTGTGGAGCAGACAACTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp GTTGTGTTGAGAAGAAGGCTGTTCATGGGGCATGTTTaGCACTGGTCCTCCGCCGGCCCCATGCAGTGGAAG +
Preference number: 6 (lower is better)
Translates to: VVLRRRLFMGHV*HWSSAGPMQWK
Trigger: CTTCCACTGCATGGGGCCGGCGGAGGACCAGTGTCAAACATGCCCCATGAACAGCCTTCTTCTCAACACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp GCACTCGTCATGACCAGGGCCTGTGCAGGTTTCGCATaGTCGGTGGCAGGACTCACATTCTCCCATTTCTTG +
Preference number: 6 (lower is better)
Translates to: ALVMTRACAGFA*SVAGLTFSHFL
Trigger: CAAGAAATGGGAGAATGTGAGTCCTGCCACCGAGCATGCGAAACCTGCACAGGCCCTGGTCATGACGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp CTTGTTGGGGTCGGCCAGTTTTTCATAGCCGGCCTTTaGTGCTGGCTGGACTCGGCCACGAGATTTCTTCCA +
Preference number: 6 (lower is better)
Translates to: LVGVGQFFIAGL*CWLDSATRFLP
Trigger: TGGAAGAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCCAACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GTAGTAGTGCAAACAGTCATTGCAGTGGTCTGGTCCTaGCCCGTCACAGCCAACCTCACTGCACTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: VVVQTVIAVVWS*PVTANLTALRV
Trigger: GACCCTGAGTGCAGTGAGGTTGGCTGTGACGGGCCAGGACCAGACCACTGCAATGACTGTTTGCACTACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp AGGAACTCTCAAGACAGAGCTCGCAGTCGTCGGCTTTaGGGCCACTGCACTCCAGACAGTCTTTATGGCAGG +
Preference number: 6 (lower is better)
Translates to: RNSQDRARSRRL*GHCTPDSLYGR
Trigger: CCTGCCATAAAGACTGTCTGGAGTGCAGTGGCCCCAAAGCCGACGACTGCGAGCTCTGTCTTGAGAGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp CCTTGCAGCTCCTGTTGCACCTCTCACACCGGCCAGTaGAGTTGTCTGCGTAATATCCTTCCCTGCACTGGA +
Preference number: 6 (lower is better)
Translates to: PCSSCCTSHTGQ*SCLRNILPCTG
Trigger: TCCAGTGCAGGGAAGGATATTACGCAGACAACTCCACTGGCCGGTGTGAGAGGTGCAACAGGAGCTGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp CAGGAACTCTCAAGACAGAGCTCGCAGTCGTCGGCTTaGGGGCCACTGCACTCCAGACAGTCTTTATGGCAG +
Preference number: 6 (lower is better)
Translates to: QELSRQSSQSSA*GPLHSRQSLWQ
Trigger: CTGCCATAAAGACTGTCTGGAGTGCAGTGGCCCCAAAGCCGACGACTGCGAGCTCTGTCTTGAGAGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp GGTTGTGTTGAGAAGAAGGCTGTTCATGGGGCATGTTaGACACTGGTCCTCCGCCGGCCCCATGCAGTGGAA +
Preference number: 6 (lower is better)
Translates to: GCVEKKAVHGAC*TLVLRRPHAVE
Trigger: TTCCACTGCATGGGGCCGGCGGAGGACCAGTGTCAAACATGCCCCATGAACAGCCTTCTTCTCAACACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp ACTTGTTGGGGTCGGCCAGTTTTTCATAGCCGGCCTTaGCTGCTGGCTGGACTCGGCCACGAGATTTCTTCC +
Preference number: 6 (lower is better)
Translates to: TCWGRPVFHSRP*LLAGLGHEISS
Trigger: GGAAGAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCCAACAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp CACACTCCGTGGTGCAGGACGTGGCCTCCTTCACAAGAATGGCAGTaGGTGGCGTTTCCTTCACATGTTCTGCAAGGAGAGCTACAGCGT +
Preference number: 6 (lower is better)
Translates to: HTPWCRTWPPSQEWQ*VAFPSHVLQGELQR
Trigger: ACGCTGTAGCTCTCCTTGCAGAACATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS GCA 72 bp GTTGAAAGCAATTCCGACTGTGCAGTGCGAATTGTTTaGAGCGGCTGCCACTTCTCCAGCACAGCGAGTCCC +
Preference number: 6 (lower is better)
Translates to: VESNSDCAVRIV*SGCHFSSTASP
Trigger: GGGACTCGCTGTGCTGGAGAAGTGGCAGCCGCTGCAAACAATTCGCACTGCACAGTCGGAATTGCTTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TGCACTCAGGGTCGCAGGGACCTGCATAATCCTCTGTaGCATAGTCGTCTGTGGGGTCTTCAACTCGGCTAT +
Preference number: 6 (lower is better)
Translates to: CTQGRRDLHNPL*HSRLWGLQLGY
Trigger: ATAGCCGAGTTGAAGACCCCACAGACGACTATGGCACAGAGGATTATGCAGGTCCCTGCGACCCTGAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp GCAAGGAGAGCTACAGCGTTCACATATGCCGTCTTCTaGATAAGAGCCCTCCGGGCACTTGGAGTAGCACCT +
Preference number: 6 (lower is better)
Translates to: ARRATAFTYAVF*IRALRALGVAP
Trigger: AGGTGCTACTCCAAGTGCCCGGAGGGCTCTTATGCAGAAGACGGCATATGTGAACGCTGTAGCTCTCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CAA 90 bp CTTCACACAGGTTGTGTTGAGAAGAAGGCTGTTCATGGGGCATGTTaGACACTGGTCCTCCGCCGGCCCCATGCAGTGGAAGCACTTAAC +
Preference number: 6 (lower is better)
Translates to: LHTGCVEKKAVHGAC*TLVLRRPHAVEALN
Trigger: GTTAAGTGCTTCCACTGCATGGGGCCGGCGGAGGACCAGTGTCAAACATGCCCCATGAACAGCCTTCTTCTCAACACAACCTGTGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp AGGAGTAAGACTTGTTGGGGTCGGCCAGTTTTTCATAGCCGGCCTTaGCTGCTGGCTGGACTCGGCCACGAGATTTCTTCCACACTACCA +
Preference number: 6 (lower is better)
Translates to: RSKTCWGRPVFHSRP*LLAGLGHEISSTLP
Trigger: TGGTAGTGTGGAAGAAATCTCGTGGCCGAGTCCAGCCAGCAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCCAACAAGTCTTACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp GTAGTTGACATGGCGGTTGGGGTTATCCGAGCAGCCTaGAGCTTTGTAGATGGAGCGCACTGCACTGTTAGG +
Preference number: 6 (lower is better)
Translates to: VVDMAVGVIRAA*SFVDGAHCTVR
Trigger: CCTAACAGTGCAGTGCGCTCCATCTACAAAGCTTCAGGCTGCTCGGATAACCCCAACCGCCATGTCAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp CACATGTTCTGCAAGGAGAGCTACAGCGTTCACATATaGCGTCTTCTGCATAAGAGCCCTCCGGGCACTTGG +
Preference number: 6 (lower is better)
Translates to: HMFCKESYSVHI*RLLHKSPPGTW
Trigger: CCAAGTGCCCGGAGGGCTCTTATGCAGAAGACGGCATATGTGAACGCTGTAGCTCTCCTTGCAGAACATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CCA 72 bp GCTCACCTGCATAATCCTCTGTGCCATAGTCGTCTGTaGGGTCTTCAACTCGGCTATAGCGGAACCGTTCCA +
Preference number: 6 (lower is better)
Translates to: AHLHNPLCHSRL*GLQLGYSGTVP
Trigger: TGGAACGGTTCCGCTATAGCCGAGTTGAAGACCCCACAGACGACTATGGCACAGAGGATTATGCAGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376767.7
CDS CCA 72 bp AGGGACCTGCATAATCCTCTGTGCCATAGTCGTCTGTaGGGTCTTCAACTCGGCTATAGCGGAACCGTTCCA +
Preference number: 6 (lower is better)
Translates to: RDLHNPLCHSRL*GLQLGYSGTVP
Trigger: TGGAACGGTTCCGCTATAGCCGAGTTGAAGACCCCACAGACGACTATGGCACAGAGGATTATGCAGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GCAGGACGTGGCCTCCTTCACAAGAATGGCAGTTGGTaGCGTTTCCTTCACATGTTCTGCAAGGAGAGCTAC +
Preference number: 6 (lower is better)
Translates to: AGRGLLHKNGSW*RFLHMFCKESY
Trigger: GTAGCTCTCCTTGCAGAACATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CCA 72 bp ACTCCGTGGTGCAGGACGTGGCCTCCTTCACAAGAATaGCAGTTGGTGGCGTTTCCTTCACATGTTCTGCAA +
Preference number: 6 (lower is better)
Translates to: TPWCRTWPPSQE*QLVAFPSHVLQ
Trigger: TTGCAGAACATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCACGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CCA 72 bp AAATATCATTCCAGAATTTGCCCTCCTCCTGGGTCTTaGTGGCATGCACGCACATCCCACGCAGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: KYHSRICPPPGS*WHARTSHAAAA
Trigger: TGCAGCTGCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAATGATATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000673745.1
CDS CCA 72 bp TGCTCACAGGCATGCCTGAGAGTGGAATGGTGGTGTTaGTGGGGGAGTGCCTGTTTACTGGTAGTAGGAGTA +
Preference number: 6 (lower is better)
Translates to: CSQACLRVEWWC*WGSACLLVVGV
Trigger: TACTCCTACTACCAGTAAACAGGCACTCCCCCACCAACACCACCATTCCACTCTCAGGCATGCCTGTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp TTGGCGTTGAAAGCAATTCCGACTGTGCAGTGCGAATaGTTTGCAGCGGCTGCCACTTCTCCAGCACAGCGA +
Preference number: 6 (lower is better)
Translates to: LALKAIPTVQCE*FAAAATSPAQR
Trigger: TCGCTGTGCTGGAGAAGTGGCAGCCGCTGCAAACAATTCGCACTGCACAGTCGGAATTGCTTTCAACGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp TGGTGCAGGACGTGGCCTCCTTCACAAGAATGGCAGTaGGTGGCGTTTCCTTCACATGTTCTGCAAGGAGAG +
Preference number: 6 (lower is better)
Translates to: WCRTWPPSQEWQ*VAFPSHVLQGE
Trigger: CTCTCCTTGCAGAACATGTGAAGGAAACGCCACCAACTGCCATTCTTGTGAAGGAGGCCACGTCCTGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS TCA 72 bp CTCCGTCCAGCATTCGCACTCCTCCGATCTTGGCGTTaGAAGCAATTCCGACTGTGCAGTGCGAATTGTTTG +
Preference number: 6 (lower is better)
Translates to: LRPAFALLRSWR*KQFRLCSANCL
Trigger: CAAACAATTCGCACTGCACAGTCGGAATTGCTTTCAACGCCAAGATCGGAGGAGTGCGAATGCTGGACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp GCGGAACCGTTCCACTTTCGGAAATTCATTGGTTGGTaGATATGGCTGCACGGAGGTGCCGTAGAGGACCAA +
Preference number: 6 (lower is better)
Translates to: AEPFHFRKFIGW*IWLHGGAVEDQ
Trigger: TTGGTCCTCTACGGCACCTCCGTGCAGCCATATTCACCAACCAATGAATTTCCGAAAGTGGAACGGTTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TCCAGCACAGCGAGTCCCATGCTTGTTCTCGTTGCTTaGATCATAACGAGGCATTGGGTCCAAGTCATTCCC +
Preference number: 6 (lower is better)
Translates to: SSTASPMLVLVA*IITRHWVQVIP
Trigger: GGGAATGACTTGGACCCAATGCCTCGTTATGATGCAAGCAACGAGAACAAGCATGGGACTCGCTGTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp TGGCACTTGGCACATGAGGCCTCACAGGTCTGGCAGTaGCCATGCTCATCAACATATTCTCCATCCTTGCAA +
Preference number: 6 (lower is better)
Translates to: WHLAHEASQVWQ*PCSSTYSPSLQ
Trigger: TTGCAAGGATGGAGAATATGTTGATGAGCATGGCCACTGCCAGACCTGTGAGGCCTCATGTGCCAAGTGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp ACAGGTCTGTGTGCTTTGCTCTACATAGTAATGGTCTaGGCAGGAGCGATGACACTCTCCTTTGGAGCGGAG +
Preference number: 6 (lower is better)
Translates to: TGLCALLYIVMV*AGAMTLSFGAE
Trigger: CTCCGCTCCAAAGGAGAGTGTCATCGCTCCTGCCCAGACCATTACTATGTAGAGCAAAGCACACAGACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp CAACTCGGCTATAGCGGAACCGTTCCACTTTCGGAAATTCATTGGTaGGTGAATATGGCTGCACGGAGGTGCCGTAGAGGACCAAAGACC +
Preference number: 6 (lower is better)
Translates to: QLGYSGTVPLSEIHW*VNMAARRCRRGPKT
Trigger: GGTCTTTGGTCCTCTACGGCACCTCCGTGCAGCCATATTCACCAACCAATGAATTTCCGAAAGTGGAACGGTTCCGCTATAGCCGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp GCAGGTTTCGCATGCTCGGTGGCAGGACTCACATTCTCCCATTTCTaGGTCACCATAGAATCCAGGACCACATTTCCTCACACAACTGCC +
Preference number: 6 (lower is better)
Translates to: AGFACSVAGLTFSHF*VTIESRTTFPHTTA
Trigger: GGCAGTTGTGTGAGGAAATGTGGTCCTGGATTCTATGGTGACCAAGAAATGGGAGAATGTGAGTCCTGCCACCGAGCATGCGAAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp AGTTTTCTCAAAATATCATTCCAGAATTTGCCCTCCTCCTGGGTCTaGGTGGCATGCACGCACATCCCACGCAGCAGCTGCAGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: SFLKISFQNLPSSWV*VACTHIPRSSCSPS
Trigger: GGAAGGACTGCAGCTGCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAATGATATTTTGAGAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000673745.1
CDS CAA 90 bp AGCGAGTCCCATGCTTGTTCTCGTTGCTTGCATCATAACGAGGCATaGGGTCCAAGTCATTCCCATTCACGTCGCAACTTGCCAGAGCAT +
Preference number: 6 (lower is better)
Translates to: SESHACSRCLHHNEA*GPSHSHSRRNLPEH
Trigger: ATGCTCTGGCAAGTTGCGACGTGAATGGGAATGACTTGGACCCAATGCCTCGTTATGATGCAAGCAACGAGAACAAGCATGGGACTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp GCATTGATCACAAGTCGGATGGCATCTCTCACAGGTCTGTGTGCTTaGCTCTACATAGTAATGGTCTGGGCAGGAGCGATGACACTCTCC +
Preference number: 6 (lower is better)
Translates to: ALITSRMASLTGLCA*LYIVMVWAGAMTLS
Trigger: GGAGAGTGTCATCGCTCCTGCCCAGACCATTACTATGTAGAGCAAAGCACACAGACCTGTGAGAGATGCCATCCGACTTGTGATCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp GTGATGAACAGAGCTGTCTTGAAATGCTCAGTTGCAGGCCTAACCTaGCTTGTTCGAAGGATGCATTCGTCCGTGGTGTCCTGGCAGTCA +
Preference number: 6 (lower is better)
Translates to: VMNRAVLKCSVAGLT*LVRRMHSSVVSWQS
Trigger: TGACTGCCAGGACACCACGGACGAATGCATCCTTCGAACAAGCAAGGTTAGGCCTGCAACTGAGCATTTCAAGACAGCTCTGTTCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TCTGGTCACAGCTGCCACAGTTACTATCACACGCCTTaGATTCCACTTCCTCACTGTAGGTCTTCTCAGGAC +
Preference number: 6 (lower is better)
Translates to: SGHSCHSYYHTP*IPLPHCRSSQD
Trigger: GTCCTGAGAAGACCTACAGTGAGGAAGTGGAATGCAAGGCGTGTGATAGTAACTGTGGCAGCTGTGACCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GGCTATAGCGGAACCGTTCCACTTTCGGAAATTCATTaGTTGGTGAATATGGCTGCACGGAGGTGCCGTAGA +
Preference number: 6 (lower is better)
Translates to: GYSGTVPLSEIH*LVNMAARRCRR
Trigger: TCTACGGCACCTCCGTGCAGCCATATTCACCAACCAATGAATTTCCGAAAGTGGAACGGTTCCGCTATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp TTTCTCAAAATATCATTCCAGAATTTGCCCTCCTCCTaGGTCTTGGTGGCATGCACGCACATCCCACGCAGC +
Preference number: 6 (lower is better)
Translates to: FLKISFQNLPSS*VLVACTHIPRS
Trigger: GCTGCGTGGGATGTGCGTGCATGCCACCAAGACCCAGGAGGAGGGCAAATTCTGGAATGATATTTTGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545128.5
ENST00000673745.1
CDS CAA 72 bp TCTCCGTCCAGCATTCGCACTCCTCCGATCTTGGCGTaGAAAGCAATTCCGACTGTGCAGTGCGAATTGTTT +
Preference number: 6 (lower is better)
Translates to: SPSSIRTPPILA*KAIPTVQCELF
Trigger: AAACAATTCGCACTGCACAGTCGGAATTGCTTTCAACGCCAAGATCGGAGGAGTGCGAATGCTGGACGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp GCATGCTCGGTGGCAGGACTCACATTCTCCCATTTCTaGGTCACCATAGAATCCAGGACCACATTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: ACSVAGLTFSHF*VTIESRTTFPH
Trigger: GTGAGGAAATGTGGTCCTGGATTCTATGGTGACCAAGAAATGGGAGAATGTGAGTCCTGCCACCGAGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp ACAAGTCGGATGGCATCTCTCACAGGTCTGTGTGCTTaGCTCTACATAGTAATGGTCTGGGCAGGAGCGATG +
Preference number: 6 (lower is better)
Translates to: TSRMASLTGLCA*LYIVMVWAGAM
Trigger: CATCGCTCCTGCCCAGACCATTACTATGTAGAGCAAAGCACACAGACCTGTGAGAGATGCCATCCGACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp AGAGCTGTCTTGAAATGCTCAGTTGCAGGCCTAACCTaGCTTGTTCGAAGGATGCATTCGTCCGTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: RAVLKCSVAGLT*LVRRMHSSVVS
Trigger: GGACACCACGGACGAATGCATCCTTCGAACAAGCAAGGTTAGGCCTGCAACTGAGCATTTCAAGACAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp GCTGTAAATGTGCACGTGCTGGGGGTTGAAGCTAACTaGTTTTGCTTCAACCATGTCCGTGACATCTCCGTC +
Preference number: 6 (lower is better)
Translates to: AVNVHVLGVEAN*FCFNHVRDISV
Trigger: GACGGAGATGTCACGGACATGGTTGAAGCAAAATCAGTTAGCTTCAACCCCCAGCACGTGCACATTTACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp ACTCTAACTTCTGGCATGTGTGGTTGGTGGGCGCTATaGAGTAGCCCTTCATGCATCTTGTGCAGACATGCA +
Preference number: 6 (lower is better)
Translates to: TLTSGMCGWWAL*SSPSCILCRHA
Trigger: TGCATGTCTGCACAAGATGCATGAAGGGCTACTTCATAGCGCCCACCAACCACACATGCCAGAAGTTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TTCAAATGTCCCGCACGGGAAGTCCTGACAATAACATaGTGTACGTCTCTCCAGGTCAGAAACGGATTGGCT +
Preference number: 6 (lower is better)
Translates to: FKCPAREVLTIT*CTSLQVRNGLA
Trigger: AGCCAATCCGTTTCTGACCTGGAGAGACGTACAGCATGTTATTGTCAGGACTTCCCGTGCGGGACATTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TGTTTTTCAGCTTGTAGTAGTAGTGCAAACAGTCATTaGAGTGGTCTGGTCCTGGCCCGTCACAGCCAACCT +
Preference number: 6 (lower is better)
Translates to: CFSACSSSANSH*SGLVLARHSQP
Trigger: AGGTTGGCTGTGACGGGCCAGGACCAGACCACTGCAATGACTGTTTGCACTACTACTACAAGCTGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp CCTGATCCTCTTCAAAGCTGGTGCTCTCTCTATAGCTaGTCTTATAGGAGGAGTAAGACTTGTTGGGGTCGG +
Preference number: 6 (lower is better)
Translates to: PDPLQSWCSLYS*SYRRSKTCWGR
Trigger: CCGACCCCAACAAGTCTTACTCCTCCTATAAGAGCAGCTATAGAGAGAGCACCAGCTTTGAAGAGGATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp TGGCATCTCTGGCAGGTGTGGTGGCATGGATGGCATTaGTTCTCAAATTCAAATTTCCATGAGGGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: WHLWQVWWHGWH*FSNSNFHEGQF
Trigger: GAACTGCCCCTCATGGAAATTTGAATTTGAGAACCAATGCCATCCATGCCACCACACCTGCCAGAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp CTTCCTTGGCATCTCTGGCAGGTGTGGTGGCATGGATaGCATTGGTTCTCAAATTCAAATTTCCATGAGGGG +
Preference number: 6 (lower is better)
Translates to: LPWHLWQVWWHG*HWFSNSNFHEG
Trigger: CCCCTCATGGAAATTTGAATTTGAGAACCAATGCCATCCATGCCACCACACCTGCCAGAGATGCCAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GTAGGGCCACTTCCTTGGCATCTCTGGCAGGTGTGGTaGCATGGATGGCATTGGTTCTCAAATTCAAATTTC +
Preference number: 6 (lower is better)
Translates to: VGPLPWHLWQVW*HGWHWFSNSNF
Trigger: GAAATTTGAATTTGAGAACCAATGCCATCCATGCCACCACACCTGCCAGAGATGCCAAGGAAGTGGCCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp CTCTATAGCTGCTCTTATAGGAGGAGTAAGACTTGTTaGGGTCGGCCAGTTTTTCATAGCCGGCCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: LYSCSYRRSKTC*GRPVFHSRPLL
Trigger: CAGCAAAGGCCGGCTATGAAAAACTGGCCGACCCCAACAAGTCTTACTCCTCCTATAAGAGCAGCTATAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp CCTTCGATATTCATGTCAGACTGGCAGGGATGTGTATaGTCACTGCAGTGCATATACCACATGCTGGGCCAC +
Preference number: 6 (lower is better)
Translates to: PSIFMSDWQGCV*SLQCIYHMLGH
Trigger: GTGGCCCAGCATGTGGTATATGCACTGCAGTGACAATACACATCCCTGCCAGTCTGACATGAATATCGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp TATAGCGGAACCGTTCCACTTTCGGAAATTCATTGGTaGGTGAATATGGCTGCACGGAGGTGCCGTAGAGGA +
Preference number: 6 (lower is better)
Translates to: YSGTVPLSEIHW*VNMAARRCRRG
Trigger: TCCTCTACGGCACCTCCGTGCAGCCATATTCACCAACCAATGAATTTCCGAAAGTGGAACGGTTCCGCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp GGAGGTGATGAACAGAGCTGTCTTGAAATGCTCAGTTaGAGGCCTAACCTTGCTTGTTCGAAGGATGCATTC +
Preference number: 6 (lower is better)
Translates to: GGDEQSCLEMLS*RPNLACSKDAF
Trigger: GAATGCATCCTTCGAACAAGCAAGGTTAGGCCTGCAACTGAGCATTTCAAGACAGCTCTGTTCATCACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp CCTCTCTTCCAGGCTCCTTCGATATTCATGTCAGACTaGCAGGGATGTGTATTGTCACTGCAGTGCATATAC +
Preference number: 6 (lower is better)
Translates to: PLFQAPSIFMSD*QGCVLSLQCIY
Trigger: GTATATGCACTGCAGTGACAATACACATCCCTGCCAGTCTGACATGAATATCGAAGGAGCCTGGAAGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GCACTCCTTAGTCTCCTTTTCATAATAGGTTCCTGCTaGACACTCCTCCAAGCACAGTCCATCATAGAGGAC +
Preference number: 6 (lower is better)
Translates to: ALLSLLFIIGSC*TLLQAQSIIED
Trigger: GTCCTCTATGATGGACTGTGCTTGGAGGAGTGTCCAGCAGGAACCTATTATGAAAAGGAGACTAAGGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp GCATTGGGTCCAAGTCATTCCCATTCACGTCGCAACTaGCCAGAGCATCGTAGTTTTGCATCAGATCTGGAT +
Preference number: 6 (lower is better)
Translates to: ALGPSHSHSRRN*PEHRSFASDLD
Trigger: ATCCAGATCTGATGCAAAACTACGATGCTCTGGCAAGTTGCGACGTGAATGGGAATGACTTGGACCCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp CATGCTTGTTCTCGTTGCTTGCATCATAACGAGGCATaGGGTCCAAGTCATTCCCATTCACGTCGCAACTTG +
Preference number: 6 (lower is better)
Translates to: HACSRCLHHNEA*GPSHSHSRRNL
Trigger: CAAGTTGCGACGTGAATGGGAATGACTTGGACCCAATGCCTCGTTATGATGCAAGCAACGAGAACAAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp GTTGGTTTCTTCATTCAGAAAGTATCCATATTTGCAGGACATGCATaGGTCACCATGGCTCCCAAAGCAGGACTCACAGTTGGGGGCACA +
Preference number: 6 (lower is better)
Translates to: VGFFIQKVSIFAGHA*VTMAPKAGLTVGGT
Trigger: TGTGCCCCCAACTGTGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAATATGGATACTTTCTGAATGAAGAAACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TCTGCACTCCTTAGTCTCCTTTTCATAATAGGTTCCTaGTGGACACTCCTCCAAGCACAGTCCATCATAGAG +
Preference number: 6 (lower is better)
Translates to: SALLSLLFIIGS*WTLLQAQSIIE
Trigger: CTCTATGATGGACTGTGCTTGGAGGAGTGTCCAGCAGGAACCTATTATGAAAAGGAGACTAAGGAGTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp CCCTGTACTCAATCACCTGATCCTCTTCAAAGCTGGTaGTCTCTCTATAGCTGCTCTTATAGGAGGAGTAAG +
Preference number: 6 (lower is better)
Translates to: PCTQSPDPLQSW*SLYSCSYRRSK
Trigger: CTTACTCCTCCTATAAGAGCAGCTATAGAGAGAGCACCAGCTTTGAAGAGGATCAGGTGATTGAGTACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GCAACTTGCCAGAGCATCGTAGTTTTGCATCAGATCTaGATGGGTTCTCTCAATTCCGTCATCCAGGATAGT +
Preference number: 6 (lower is better)
Translates to: ATCQSIVVLHQI*MGSLNSVIQDS
Trigger: ACTATCCTGGATGACGGAATTGAGAGAACCCATCCAGATCTGATGCAAAACTACGATGCTCTGGCAAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp GATCCCTGTACTCAATCACCTGATCCTCTTCAAAGCTaGTGCTCTCTCTATAGCTGCTCTTATAGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: DPCTQSPDPLQS*CSLYSCSYRRS
Trigger: ACTCCTCCTATAAGAGCAGCTATAGAGAGAGCACCAGCTTTGAAGAGGATCAGGTGATTGAGTACAGGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp TGTATCCATTCTCTGAAGAGTGGTCAAAGTAATAGCTaGTACTACAGCTCTGCACGCATCTCCCATCCTCCA +
Preference number: 6 (lower is better)
Translates to: CIHSLKSGQSNS*YYSSARISHPP
Trigger: TGGAGGATGGGAGATGCGTGCAGAGCTGTAGTATCAGCTATTACTTTGACCACTCTTCAGAGAATGGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000455778.1
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp GCATGGATGGCATTGGTTCTCAAATTCAAATTTCCATaGGGGGCAGTTCGAAACACAGCGGCCATCATCAAA +
Preference number: 6 (lower is better)
Translates to: AWMALVLKFKFP*GAVRNTAAIIK
Trigger: TTTGATGATGGCCGCTGTGTTTCGAACTGCCCCTCATGGAAATTTGAATTTGAGAACCAATGCCATCCATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp TCATTCAGAAAGTATCCATATTTGCAGGACATGCATTaGTCACCATGGCTCCCAAAGCAGGACTCACAGTTG +
Preference number: 6 (lower is better)
Translates to: SFRKYPYLQDMH*SPWLPKQDSQL
Trigger: CAACTGTGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAATATGGATACTTTCTGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp TCTAAGAGATACCCACTAGGGCAGCTTGTACAGTTCTaGAATCCTGGGCCATTGCACGTCAAACAACTGATA +
Preference number: 6 (lower is better)
Translates to: SKRYPLGQLVQF*NPGPLHVKQLI
Trigger: TATCAGTTGTTTGACGTGCAATGGCCCAGGATTCAAGAACTGTACAAGCTGCCCTAGTGGGTATCTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000455778.1
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TTTCTTCATTCAGAAAGTATCCATATTTGCAGGACATaGATTGGTCACCATGGCTCCCAAAGCAGGACTCAC +
Preference number: 6 (lower is better)
Translates to: FLHSESIHICRT*IGHHGSQSRTH
Trigger: GTGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAATATGGATACTTTCTGAATGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CCA 72 bp ATACCCACTAGGGCAGCTTGTACAGTTCTTGAATCCTaGGCCATTGCACGTCAAACAACTGATATCACATTT +
Preference number: 6 (lower is better)
Translates to: IPTRAACTVLES*AIARQTTDITF
Trigger: AAATGTGATATCAGTTGTTTGACGTGCAATGGCCCAGGATTCAAGAACTGTACAAGCTGCCCTAGTGGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000455778.1
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp TTCATTCAGAAAGTATCCATATTTGCAGGACATGCATaGGTCACCATGGCTCCCAAAGCAGGACTCACAGTT +
Preference number: 6 (lower is better)
Translates to: FIQKVSIFAGHA*VTMAPKAGLTV
Trigger: AACTGTGAGTCCTGCTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAATATGGATACTTTCTGAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp CAGCTGTTGGTTTCTTCATTCAGAAAGTATCCATATTaGCAGGACATGCATTGGTCACCATGGCTCCCAAAG +
Preference number: 6 (lower is better)
Translates to: QLLVSSFRKYPY*QDMHWSPWLPK
Trigger: CTTTGGGAGCCATGGTGACCAATGCATGTCCTGCAAATATGGATACTTTCTGAATGAAGAAACCAACAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS TCA 72 bp CTAAACAGAGAAACATCCTTGCAAATGGCTCCCATTTaGCACATTCCTAAGTCTAAGAGATACCCACTAGGG +
Preference number: 6 (lower is better)
Translates to: LNRETSLQMAPI*HIPKSKRYPLG
Trigger: CCCTAGTGGGTATCTCTTAGACTTAGGAATGTGTCAAATGGGAGCCATTTGCAAGGATGTTTCTCTGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455778.1
CDS CCA 72 bp ATCCATTCCACCTTTGGTTCCATTGAAATGAAACTGTaGGTCCCTCTGCTCGAGATAACTGACCTTTTAATC +
Preference number: 6 (lower is better)
Translates to: IHSTFGSIEMKL*VPLLEITDLLI
Trigger: GATTAAAAGGTCAGTTATCTCGAGCAGAGGGACCCACAGTTTCATTTCAATGGAACCAAAGGTGGAATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000376767.7
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp GAAGATATGCACCTTTGGGACATGAAGTGCACAGAGTaGCAGATCCATTGCAGGTTTTACAAGAAGAATGAC +
Preference number: 6 (lower is better)
Translates to: EDMHLWDMKCTE*QIHCRFYKKND
Trigger: GTCATTCTTCTTGTAAAACCTGCAATGGATCTGCAACTCTGTGCACTTCATGTCCCAAAGGTGCATATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424854.6
ENST00000545128.5
ENST00000673745.1
ENST00000674117.1
CDS CAA 90 bp AACCCATCCCTACATTCTGTACAGTTATGGAATTCAGTACATGTCTaGCAGTTTTCACTGCATTTCCGGCAAAGATTTTTCTTGGTATCC +
Preference number: 6 (lower is better)
Translates to: NPSLHSVQLWNSVHV*QFSLHFRQRFFLVS
Trigger: GGATACCAAGAAAAATCTTTGCCGGAAATGCAGTGAAAACTGCAAGACATGTACTGAATTCCATAACTGTACAGAATGTAGGGATGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 90 bp TTGAAATGTACATGTTTTGCAGCAAAGTTGTTGAAGAACCTTCCGTaGGCACAGATTGTTCTTTTTCACAAGCATACAGAAGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LKCTCFAAKLLKNLP*AQIVLFHKHTEASF
Trigger: GAAGGAGGCTTCTGTATGCTTGTGAAAAAGAACAATCTGTGCCAACGGAAGGTTCTTCAACAACTTTGCTGCAAAACATGTACATTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376752.8
CDS GCA 72 bp AGTTATGGAATTCAGTACATGTCTTGCAGTTTTCACTaGATTTCCGGCAAAGATTTTTCTTGGTATCCTGAT +
Preference number: 6 (lower is better)
Translates to: SYGIQYMSCSFH*ISGKDFSWYPD
Trigger: ATCAGGATACCAAGAAAAATCTTTGCCGGAAATGCAGTGAAAACTGCAAGACATGTACTGAATTCCATAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS CAA 72 bp CTACATTCTGTACAGTTATGGAATTCAGTACATGTCTaGCAGTTTTCACTGCATTTCCGGCAAAGATTTTTC +
Preference number: 6 (lower is better)
Translates to: LHSVQLWNSVHV*QFSLHFRQRFF
Trigger: GAAAAATCTTTGCCGGAAATGCAGTGAAAACTGCAAGACATGTACTGAATTCCATAACTGTACAGAATGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1
CDS GCA 72 bp TACATTCTGTACAGTTATGGAATTCAGTACATGTCTTaGAGTTTTCACTGCATTTCCGGCAAAGATTTTTCT +
Preference number: 6 (lower is better)
Translates to: YILYSYGIQYMS*SFHCISGKDFS
Trigger: AGAAAAATCTTTGCCGGAAATGCAGTGAAAACTGCAAGACATGTACTGAATTCCATAACTGTACAGAATGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376752.8
ENST00000424854.6
ENST00000545128.5
ENST00000674117.1