RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCSK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000125851

Ensembl transcript IDs: ENST00000262545.7, ENST00000377899.5, ENST00000459871.1, ENST00000470007.1, ENST00000536609.1

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTaGCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: KKTELPVRVMELLGA*LKRGARTEAELGRE
Trigger: CTCCCTCCCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
3UTR CCA 90 bp CTTCAGGCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTaGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGC +
Preference number: 1 (lower is better)
Translates to: LQASGSSGMNCMALS*QKRLHTTGELCEDS
Trigger: GCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGCCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR GCA 90 bp ATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTAGTTaGCGAGAAGGTGACTGTGTGCTTTCCTCACAGAGGTCTTCTCTC +
Preference number: 1 (lower is better)
Translates to: ITFGLHVKWSQGLLS*REGDCVLSSQRSSL
Trigger: GAGAGAAGACCTCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR TCA 90 bp TCCTGTGCTTTCAGAGATGTGGCGCTCACACCCTGTCCTCAGCTTTaGTTTTCTTGTTATGTAACAGCCCCTTGTTTGAGACCATGGACA +
Preference number: 1 (lower is better)
Translates to: SCAFRDVALTPCPQL*FSCYVTAPCLRPWT
Trigger: TGTCCATGGTCTCAAACAAGGGGCTGTTACATAACAAGAAAATCAAAGCTGAGGACAGGGTGTGAGCGCCACATCTCTGAAAGCACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR GCA 90 bp TTCAAAACATCGCTCCCCAAAGGATTTATAGCACAGTGTCTCCTGTaGTTTCAGAGATGTGGCGCTCACACCCTGTCCTCAGCTTTGATT +
Preference number: 1 (lower is better)
Translates to: FKTSLPKGFIAQCLL*FQRCGAHTLSSALI
Trigger: AATCAAAGCTGAGGACAGGGTGTGAGCGCCACATCTCTGAAAGCACAGGAGACACTGTGCTATAAATCCTTTGGGGAGCGATGTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CCA 90 bp TTCCTGGATCTCTTTCCCCATGCAGTAACTAGGGCTCTCTATGAATaGCATCTTTTGAATCACATCACCTTAATCTACATCCCTGGTAAA +
Preference number: 1 (lower is better)
Translates to: FLDLFPHAVTRALYE*HLLNHITLIYIPGK
Trigger: TTTACCAGGGATGTAGATTAAGGTGATGTGATTCAAAAGATGCCATTCATAGAGAGCCCTAGTTACTGCATGGGGAAAGAGATCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CCA 90 bp CCGGGACAGAGGCCTTTTTCCCAACACATTAATGACATCAAACTGTaGGGGAGTATGAGATTTCTCTTCCATTATATTACTTGGAAATCA +
Preference number: 1 (lower is better)
Translates to: PGQRPFSQHINDIKL*GSMRFLFHYITWKS
Trigger: TGATTTCCAAGTAATATAATGGAAGAGAAATCTCATACTCCCCCACAGTTTGATGTCATTAATGTGTTGGGAAAAAGGCCTCTGTCCCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CCA 90 bp AGAGAAGACAGAAATCCATGCCAATATGGGAGAAAAGAAAGCAAATaGGGTTTTCAGATTTCTCTCTTAAAGTGGCCACCTTCAGGGAAT +
Preference number: 1 (lower is better)
Translates to: REDRNPCQYGRKESK*GFQISLLKWPPSGN
Trigger: ATTCCCTGAAGGTGGCCACTTTAAGAGAGAAATCTGAAAACCCCATTTGCTTTCTTTTCTCCCATATTGGCATGGATTTCTGTCTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CCA 90 bp GGTGATGCAATGGGAATTGATGAACATTTTCACCTGAATTTCCACTaGCCTTTTTCAGCCAGAATCATCTTGATATTCTCTGAATATTCT +
Preference number: 1 (lower is better)
Translates to: GDAMGIDEHFHLNFH*PFSARIILIFSEYS
Trigger: AGAATATTCAGAGAATATCAAGATGATTCTGGCTGAAAAAGGCCAGTGGAAATTCAGGTGAAAATGTTCATCAATTCCCATTGCATCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGGGAGGGAGGGCGGTaGGAAAGGCGGATGTGCAGC +
Preference number: 2 (lower is better)
Translates to: TGDGIARCLPETWSEDRGGEGGR*ERRMCS
Trigger: GCTGCACATCCGCCTTTCCCACCGCCCTCCCTCCCC...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
3UTR-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGGGGGAGGGAGGGCGGTaGGAAAGGCGGATGTGCAGC +
Preference number: 2 (lower is better)
Translates to: ELPVRVMELLGACLKRGAGEGGR*ERRMCS
Trigger: GCTGCACATCCGCCTTTCCCACCGCCCTCCCTCCCC...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
3UTR-3UTR CCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGGGGAGGGAGGGCGGTaGGAAAGGCGGATGTGCAGC +
Preference number: 2 (lower is better)
Translates to: TELPVRVMELLGACLKRGGEGGR*ERRMCS
Trigger: GCTGCACATCCGCCTTTCCCACCGCCCTCCCTCCCC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
3UTR-3UTR CCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCGTGCTTTCAGAGATGTaGCGCTCACACCCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLVLSEM*RSHPVL
Trigger: GAGGACAGGGTGTGAGCGCCACATCTCTGAAAGCAC...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGAGGCCTCAGGTTCCTCTaGGATGAATTGCATGGCCCT +
Preference number: 2 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRGLRFL*DELHGP
Trigger: AGGGCCATGCAATTCATCCCAGAGGAACCTGAGGCC...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 90 bp AAGCTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATaGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAG +
Preference number: 2 (lower is better)
Translates to: KLQIKKTELPVRVME*LGACLKRGARTEAE
Trigger: CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
3UTR-3UTR TCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGACAGGTTCCTCTGGGATaGATTGCATGGCCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRQVPLG*IAWPSL
Trigger: AAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTG...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGATGCATGGCCCTCTCTTaGCAGAAGAGGCTCCATACA +
Preference number: 2 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRCMALS*QKRLHT
Trigger: TGTATGGAGCCTCTTCTGCCAAGAGAGGGCCATGCA...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR TCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTCAGGTTCCTCTGGGATaGATTGCATGGCCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAQVPLG*IAWPSL
Trigger: AAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTG...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 90 bp CCTGGAGAGGCTGAAGACAAAGCATTTCTTGGGAATGGATGTGCATaGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTTGGT +
Preference number: 2 (lower is better)
Translates to: PGEAEDKAFLGNGCA*GLGMRSNLWVGHFG
Trigger: ACCAAAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTCCCAAGAAATGCTTTGTCTTCAGCCTCTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR GCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTGATGGAATTGCTAGGTaGCTGCCTGAAACGTGGAGC +
Preference number: 2 (lower is better)
Translates to: LSWQKRLHTTGELCEDSADGIAR*LPETWS
Trigger: GCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR GCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGAAATATCCAGCACTCATaGTTCCTGGATCTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRNIQHS*FLDLFP
Trigger: GGGAAAGAGATCCAGGAAGCATGAGTGCTGGATATT...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTGGAGCCCCAGAAAATTaGGGCTGGGATGAACTCTAT +
Preference number: 2 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLGAPEN*GWDELY
Trigger: ATAGAGTTCATCCCAGCCCCAATTTTCTGGGGCTCC...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCAATGACATCAAACTGTaGGGGAGTATGAGATTTCTC +
Preference number: 2 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLNDIKL*GSMRFL
Trigger: GAGAAATCTCATACTCCCCCACAGTTTGATGTCATT...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 90 bp CTCCTGTGCTTTCAGAGATGTGGCGCTCACACCCTGTCCTCAGCTTaGATTTTCTTGTTATGTAACAGCCCCTTGTTTGAGACCATGGAC +
Preference number: 2 (lower is better)
Translates to: LLCFQRCGAHTLSSA*IFLLCNSPLFETMD
Trigger: GTCCATGGTCTCAAACAAGGGGCTGTTACATAACAAGAAAATCAAAGCTGAGGACAGGGTGTGAGCGCCACATCTCTGAAAGCACAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTAGCACTCATGCTTCCTaGATCTCTTTCCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: LSWQKRLHTTGELCEDSASTHAS*ISFPMQ
Trigger: CTGCATGGGGAAAGAGATCCAGGAAGCATGAGTGCT...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 90 bp ATGGGGTTTTCAGATTTCTCTCTTAAAGTGGCCACCTTCAGGGAATaGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCC +
Preference number: 2 (lower is better)
Translates to: MGFSDFSLKVATFRE*NLVLCVAGLKERCS
Trigger: GGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCCCTGAAGGTGGCCACTTTAAGAGAGAAATCTGAAAACCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR TCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGACCCTGTCCTCAGCTTTaGTTTTCTTGTTATGTAACA +
Preference number: 2 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRPCPQL*FSCYVT
Trigger: TGTTACATAACAAGAAAATCAAAGCTGAGGACAGGG...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR GCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGAGAAGGTGACTGTGTaGTTTCCTCACAGAGGTCTT +
Preference number: 2 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLEKVTV*FPHRGL
Trigger: AAGACCTCTGTGAGGAAAGCACACAGTCACCTTCTC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGATGGAGTCACTCTATGTaGCTTTTAAAATACGTTCTT +
Preference number: 2 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRWSHSM*LLKYVL
Trigger: AAGAACGTATTTTAAAAGCCACATAGAGTGACTCCA...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTCCTTGTTTGAGACCATaGACAATTGTTCTTGGAGTC +
Preference number: 2 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAPCLRP*TIVLGV
Trigger: GACTCCAAGAACAATTGTCCATGGTCTCAAACAAGG...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 90 bp TTTCAGAGATGTGGCGCTCACACCCTGTCCTCAGCTTTGATTTTCTaGTTATGTAACAGCCCCTTGTTTGAGACCATGGACAATTGTTCT +
Preference number: 2 (lower is better)
Translates to: FQRCGAHTLSSALIF*LCNSPLFETMDNCS
Trigger: AGAACAATTGTCCATGGTCTCAAACAAGGGGCTGTTACATAACAAGAAAATCAAAGCTGAGGACAGGGTGTGAGCGCCACATCTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR TCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTGAACTCTATACAAACTaGGAAAAATTTGGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAELYTN*EKFGLL
Trigger: GAGCAGCCCAAATTTTTCTCAGTTTGTATAGAGTTC...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR GCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTCTTCACCAGGTGTGTTaGCAGGCTTGTCTTAATTTT +
Preference number: 2 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLLHQVC*QACLNF
Trigger: AAAATTAAGACAAGCCTGGCAACACACCTGGTGAAG...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 90 bp GATCAGATTGAGACACCTCAAAGTGACTTAGGAAAAGGGACATTCTaGTTTGAAAAGCTAGTAAACTACTCTTCACCAGGTGTGTTGCCA +
Preference number: 2 (lower is better)
Translates to: DQIETPQSDLGKGTF*FEKLVNYSSPGVLP
Trigger: TGGCAACACACCTGGTGAAGAGTAGTTTACTAGCTTTTCAAACAAGAATGTCCCTTTTCCTAAGTCACTTTGAGGTGTCTCAATCTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR GCA 72 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTaGCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTG +
Preference number: 3 (lower is better)
Translates to: ELPVRVMELLGA*LKRGARTEAEL
Trigger: CAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
3UTR TCA 72 bp TCTCTCACCTCCTTCAGGCCTCAGGTTCCTCTGGGATaGATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: SLTSFRPQVPLG*IAWPSLGRRGS
Trigger: GGAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGCCTGAAGGAGGTGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR TCA 72 bp CGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATaGCTCTTCCGGGACAGAGGCCTTTTTCCCAACACA +
Preference number: 3 (lower is better)
Translates to: RSHLQTCPFHLP*LFRDRGLFPNT
Trigger: TGTGTTGGGAAAAAGGCCTCTGTCCCGGAAGAGTCATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR GCA 72 bp AACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTaGTCCAGGCTAAGCTCTCTGCTCCCACAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: NLVLCVAGLKER*SRLSSLLPQEG
Trigger: CCCTTCCTGTGGGAGCAGAGAGCTTAGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR GCA 72 bp CTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTaGTTTCCTCACAGAGGTCTTCTCTCACCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: LRDCLVAEKVTV*FPHRGLLSPPS
Trigger: TGAAGGAGGTGAGAGAAGACCTCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR GCA 72 bp GGGTTGCATGTTAAATGGTCTCAGGGACTGCTTAGTTaGCGAGAAGGTGACTGTGTGCTTTCCTCACAGAGG +
Preference number: 3 (lower is better)
Translates to: GLHVKWSQGLLS*REGDCVLSSQR
Trigger: CCTCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACCATTTAACATGCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CAA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGAGGACATGGATGTTGTaGGGAACGCTATATTTGGGG +
Preference number: 3 (lower is better)
Translates to: NYVKIALASSNVPLSPPMRTWML*GTLYLG
Trigger: CCCCAAATATAGCGTTCCCAACAACATCCATGTCCT...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CCA 72 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATaGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGAC +
Preference number: 3 (lower is better)
Translates to: LGLTITFGLHVK*SQGLLSCREGD
Trigger: GTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CAA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTGTAACAGCCCCTTGTTaGAGACCATGGACAATTGTT +
Preference number: 3 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLVTAPC*RPWTIV
Trigger: AACAATTGTCCATGGTCTCAAACAAGGGGCTGTTAC...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CAA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTCTCACTCAGATCAGATaGAGACACCTCAAAGTGACT +
Preference number: 3 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLLTQIR*RHLKVT
Trigger: AGTCACTTTGAGGTGTCTCAATCTGATCTGAGTGAG...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CAA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTACCCTGTCCTCAGCTTaGATTTTCTTGTTATGTAAC +
Preference number: 3 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLTLSSA*IFLLCN
Trigger: GTTACATAACAAGAAAATCAAAGCTGAGGACAGGGT...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CCA 72 bp ATTTATAGCACAGTGTCTCCTGTGCTTTCAGAGATGTaGCGCTCACACCCTGTCCTCAGCTTTGATTTTCTT +
Preference number: 3 (lower is better)
Translates to: IYSTVSPVLSEM*RSHPVLSFDFL
Trigger: AAGAAAATCAAAGCTGAGGACAGGGTGTGAGCGCCACATCTCTGAAAGCACAGGAGACACTGTGCTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR-3UTR CAA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTCTTCCATTATATTACTaGGAAATCAAAGCCCACATC +
Preference number: 3 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLLPLYY*EIKAHI
Trigger: GATGTGGGCTTTGATTTCCAAGTAATATAATGGAAG...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CCA 72 bp CTCTTTCCCCATGCAGTAACTAGGGCTCTCTATGAATaGCATCTTTTGAATCACATCACCTTAATCTACATC +
Preference number: 3 (lower is better)
Translates to: LFPHAVTRALYE*HLLNHITLIYI
Trigger: GATGTAGATTAAGGTGATGTGATTCAAAAGATGCCATTCATAGAGAGCCCTAGTTACTGCATGGGGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CCA 72 bp TTTTCTTGTTATGTAACAGCCCCTTGTTTGAGACCATaGACAATTGTTCTTGGAGTCACTCTATGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: FSCYVTAPCLRP*TIVLGVTLCGF
Trigger: AAAGCCACATAGAGTGACTCCAAGAACAATTGTCCATGGTCTCAAACAAGGGGCTGTTACATAACAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CCA 72 bp AGGCCTTTTTCCCAACACATTAATGACATCAAACTGTaGGGGAGTATGAGATTTCTCTTCCATTATATTACT +
Preference number: 3 (lower is better)
Translates to: RPFSQHINDIKL*GSMRFLFHYIT
Trigger: AGTAATATAATGGAAGAGAAATCTCATACTCCCCCACAGTTTGATGTCATTAATGTGTTGGGAAAAAGGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACCTGGAGGGGAAGCCGTaGAGTCAGGCGGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDLEGKP*SQAARR
Trigger: GCGCCGGGCCGCCTGACTGCACGGCTTCCCCTCCAG...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR TCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCCCATGGCCTGCAGCGTaGGCTCCCGGGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGPWPAA*APGAHP
Trigger: TGGATGGGCCCCGGGAGCTCACGCTGCAGGCCATGG...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGAGGCCCACACGTAGATaGTGCCTTTGCCGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAERPTRR*CLCRRG
Trigger: GCCGCGGCGGCAAAGGCAGCATCTACGTGTGGGCCT...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCCCAGGCCGACCCCATTaGGCCGCCACTGATGGACCT +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGPGRPH*AATDGP
Trigger: AGGTCCATCAGTGGCGGCGCAATGGGGTCGGCCTGG...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGGTGTTCTCCAGCATCTaGCTGGAGGGGAAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGVFSSI*LEGKPC
Trigger: GCACGGCTTCCCCTCCAGCCAGATGCTGGAGAACAC...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR TCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGACCATGGCCTGCAGCGTaGGCTCCCGGGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRPWPAA*APGAHP
Trigger: TGGATGGGCCCCGGGAGCTCACGCTGCAGGCCATGG...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTCTGGAGGGGAAGCCGTaGAGTCAGGCGGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQALEGKP*SQAARR
Trigger: GCGCCGGGCCGCCTGACTGCACGGCTTCCCCTCCAG...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262545.7
CDS-3UTR GCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGCCCATCCACTGTCTTaGCGTTGTCTGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGAAHPLS*RCLWGP
Trigger: GGGGCCCCACAGACAACGGCAAGACAGTGGATGGGC...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACACCCACACGTAGATGCTaGCTTTGCCGCCGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTPTRRC*LCRRGP
Trigger: AGGGCCGCGGCGGCAAAGGCAGCATCTACGTGTGGG...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGAGCCTCCAGAGCCAGTaGAAACACACCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGSLQSQ*KHTSCL
Trigger: GAGGCAGCTGGTGTGTTTGCACTGGCTCTGGAGGCT...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACGCGGCCGCCTTCCACTaGGAGACACAACCACCCTTC +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDAAAFH*ETQPPF
Trigger: GAAGGGTGGTTGTGTCTCCCAGTGGAAGGCGGCCGC...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR CCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGGGGGAGGGAGGGCGGTaGGAAAGGCGGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWGEGGR*ERRMCS
Trigger: GCTGCACATCCGCCTTTCCCACCGCCCTCCCTCCCC...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGAGCAGAAACTTCTCCTaGACATCGGGTCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGSRNFS*TSGPVA
Trigger: AGCCACGGGACCCGATGTGCAGGAGAAGTTTCTGCT...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGGGTCCAGCATCCGGATaGCTGCAACCTTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGGPASG*LQPWSC
Trigger: ACAACTCCAAGGTTGCAGGCATCCGGATGCTGGACC...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCGCCCATCCACTGTCTTaGCGTTGTCTGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLAHPLS*RCLWGP
Trigger: GGGGCCCCACAGACAACGGCAAGACAGTGGATGGGC...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCTGCCTCGGGGGCAGCTaGAGATGTCCCAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGCLGGS*RCPRMP
Trigger: AGGCATTCTGGGACATCTGCAGCTGCCCCCGAGGCA...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGCCAGGCCGACCCCATTaGGCCGCCACTGATGGACCT +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWPGRPH*AATDGP
Trigger: AGGTCCATCAGTGGCGGCGCAATGGGGTCGGCCTGG...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGACGGGGCACTCTGAGTaGCATGCAGCATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAETGHSE*HAASGS
Trigger: GGACCCTGATGCTGCATGGCACTCAGAGTGCCCCGT...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACACGGGGCACTCTGAGTaGCATGCAGCATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDTGHSE*HAASGS
Trigger: GGACCCTGATGCTGCATGGCACTCAGAGTGCCCCGT...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGGAATTGCTAGGTGCCTaGCTGAAACGTGGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGELLGA*LKRGAR
Trigger: CCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTC...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACTCTCCAGCATCTGGCTaGAGGGGAAGCCGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDSPASG*RGSRAV
Trigger: GACTGCACGGCTTCCCCTCCAGCCAGATGCTGGAGA...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR CCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTGAGACGCGGCCGGGGTaGACACGGCGGGAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAETRPG*TRREVH
Trigger: ATGCACCTCCCGCCGTGTCCACCCCGGCCGCGTCTC...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS-3UTR TCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACCATGGCCTGCAGCGTaGGCTCCCGGGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKPWPAA*APGAHP
Trigger: TGGATGGGCCCCGGGAGCTCACGCTGCAGGCCATGG...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCCACAGGCGTCGGTTGTaGGTGTCAGCACCAACTTGC +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGHRRRL*VSAPTC
Trigger: GCAAGTTGGTGCTGACACTCACAACCGACGCCTGTG...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGGCTTGTGGTGTAGGCTaGGTCTTCTCTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGACGVG*VFSWPL
Trigger: CAAAGGCCAAGAGAAGACGCAGCCTACACCACAAGC...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGACCCACACGTAGATGCTaGCTTTGCCGCCGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGPTRRC*LCRRGP
Trigger: AGGGCCGCGGCGGCAAAGGCAGCATCTACGTGTGGG...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACATGCAAACACACCAGCTaGCTCGGGGGCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTCKHTS*LGGSCR
Trigger: TCTGCAGCTGCCCCCGAGGCAGCTGGTGTGTTTGCA...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCAGCCTCCAGAGCCAGTaGAAACACACCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGSLQSQ*KHTSCL
Trigger: GAGGCAGCTGGTGTGTTTGCACTGGCTCTGGAGGCT...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGCCTTCTGCGGGGCGCTaGCGACAAATCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEPSAGR*RQIPAP
Trigger: TGGAGCTGGGATTTGTCGGCAGCGCCCCGCAGAAGG...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCACGGGGCACTCTGAGTaGCATGCAGCATCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLTGHSE*HAASGS
Trigger: GGACCCTGATGCTGCATGGCACTCAGAGTGCCCCGT...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGTGGGGCCCCAGCTaGCGCTGTAGATGTCAATCA +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAELWGPS*RCRCQS
Trigger: TGATTGACATCTACAGCGCCAGCTGGGGCCCCACAG...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTTGCCGTACAAATCTGTaGTTGCCACACCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGACRTNL*LPHRPR
Trigger: CCGAGGCCGGTGTGGCAACCACAGATTTGTACGGCA...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGTGCCGTACAAATCTGTaGTTGCCACACCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAECRTNL*LPHRPR
Trigger: CCGAGGCCGGTGTGGCAACCACAGATTTGTACGGCA...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACTCTAGGGGTGATCCATaGGGGGCGAGAGTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDSRGDP*GARVQG
Trigger: TCCTTGCACTCTCGCCCCCCATGGATCACCCCTAGA...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS-3UTR TCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCAGGGGTCGTTGCTGCTaGAGTCGTAACTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGRGRCC*SRNLLR
Trigger: CCGAAGCAAGTTACGACTTCAGCAGCAACGACCCCT...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTAGGGGTCGTTGCTGCTaGAGTCGTAACTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGARGRCC*SRNLLR
Trigger: CCGAAGCAAGTTACGACTTCAGCAGCAACGACCCCT...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACGCCGTCGTTGATGGCTaGGTTGATGGAGATGGTCCA +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDAVVDG*VDGDGP
Trigger: TGGACCATCTCCATCAACTCAGCCATCAACGACGGC...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGTTTTCCTCCCGTTGCTaGAGGTGGAAGCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAEFSSRC*RWKPRW
Trigger: CCACCTTGGCTTCCACCTTCAGCAACGGGAGGAAAA...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGCCCTTTCACCTCCCATaGCTCTTCCGGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAPFHLP*LFRDRG
Trigger: GCCTCTGTCCCGGAAGAGTCATGGGAGGTGAAAGGG...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGAAAGCCGTGTTCTGCTaGAACTTGGCGAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGKAVFC*NLASFV
Trigger: GACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTT...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCGGGTCTCTCTCCAGCTaGTGCTTGTGGTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLGSLSS*CLWCRL
Trigger: CAGCCTACACCACAAGCAGCAGCTGGAGAGAGACCC...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTCCCACACGTAGATGCTaGCTTTGCCGCCGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAPTRRC*LCRRGP
Trigger: AGGGCCGCGGCGGCAAAGGCAGCATCTACGTGTGGG...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGTGGAGATGGTCCACATaGTGGAGGCGTAGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWWRWST*WRRSRR
Trigger: GCGACGGCTACGCCTCCAGCATGTGGACCATCTCCA...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGGCCTCAGAGTGCAGTTaGCGTACAAATCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGASECS*RTNLWL
Trigger: CAACCACAGATTTGTACGGCAACTGCACTCTGAGGC...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGTGCCTCGGGGGCAGCTaGAGATGTCCCAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWCLGGS*RCPRMP
Trigger: AGGCATTCTGGGACATCTGCAGCTGCCCCCGAGGCA...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGTGAGCACAGTCAGATaGTGCATGTCCCGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTVSTVR*CMSRQV
Trigger: GACCTGGCGGGACATGCAGCATCTGACTGTGCTCAC...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTTTTCACCATGGCACCTaGATCAAGGACCCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGAFHHGT*IKDPVA
Trigger: GGCTACGGGGTCCTTGATGCAGGTGCCATGGTGAAA...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTATTTTCTCAGGGTCCTaGACGGAGCCTCCCACACAG +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGAIFSGS*TEPPTQ
Trigger: CTGTGTGGGAGGCTCCGTGCAGGACCCTGAGAAAAT...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGACCTTCTGCGGGGCGCTaGCGACAAATCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRPSAGR*RQIPAP
Trigger: TGGAGCTGGGATTTGTCGGCAGCGCCCCGCAGAAGG...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGTTCAGCACCCCCTTCTaGGGGGCGCTGCCGACAAAT +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAFSTPF*GALPTN
Trigger: ATTTGTCGGCAGCGCCCCGCAGAAGGGGGTGCTGAA...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACGAATTGCTAGGTGCCTaGCTGAAACGTGGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDELLGA*LKRGAR
Trigger: CCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTC...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGCTGGGGACGTTCCACTaGACAAGGACAGCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGALGTFH*TRTARV
Trigger: CACCCTCGCTGTCCTTGTGCAGTGGAACGTCCCCAG...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGGACACGGCGGGAGGTaGATTCTCAGACCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGGHGGR*ILRPGD
Trigger: GTCCCCAGGTCTGAGAATGCACCTCCCGCCGTGTCC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS-3UTR CCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACCTTCGGCATTATAGTTaGAGGCCAGGTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDLRHYS*RPGPGG
Trigger: TCCACCCGGACCTGGCCTCCAACTATAATGCCGAAG...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTTCGGCATTATAGTTaGAGGCCAGGTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAELRHYS*RPGPGG
Trigger: TCCACCCGGACCTGGCCTCCAACTATAATGCCGAAG...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCCTGTGGGGCCCCAGCTaGCGCTGTAGATGTCAATCA +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLLWGPS*RCRCQS
Trigger: TGATTGACATCTACAGCGCCAGCTGGGGCCCCACAG...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGATCTTGCCGTTGTCTGTaGGGCCCCAGCTGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGSCRCL*GPSWRC
Trigger: ACAGCGCCAGCTGGGGCCCCACAGACAACGGCAAGA...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGGAGCCTCCCACACAGTaGAATCTCTCAGGCACGGTT +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAEEPPTQ*NLSGTV
Trigger: AACCGTGCCTGAGAGATTCCACTGTGTGGGAGGCTC...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGCCAGCTCCTCTTTCTTaGACATGGCCAACTTGGACT +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGPAPLS*TWPTWT
Trigger: AGTCCAAGTTGGCCATGTCCAAGAAAGAGGAGCTGG...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGTGCTTTCAGAGATGTaGCGCTCACACCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGAVLSEM*RSHPVL
Trigger: GAGGACAGGGTGTGAGCGCCACATCTCTGAAAGCAC...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCTTTTCCTCCCGTTGCTaGAGGTGGAAGCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLFSSRC*RWKPRW
Trigger: CCACCTTGGCTTCCACCTTCAGCAACGGGAGGAAAA...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGCACAGGCGTCGGTTGTaGGTGTCAGCACCAACTTGC +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWHRRRL*VSAPTC
Trigger: GCAAGTTGGTGCTGACACTCACAACCGACGCCTGTG...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCAGCATCCGGATGCCTaGAACCTTGGAGTTGTATGC +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAEQHPDA*NLGVVC
Trigger: GCATACAACTCCAAGGTTGCAGGCATCCGGATGCTG...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCCAGCATCCGGATGCCTaGAACCTTGGAGTTGTATGC +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGQHPDA*NLGVVC
Trigger: GCATACAACTCCAAGGTTGCAGGCATCCGGATGCTG...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGGTCCAGCATCCGGATaGCTGCAACCTTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTGPASG*LQPWSC
Trigger: ACAACTCCAAGGTTGCAGGCATCCGGATGCTGGACC...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAAGGCCCACACGTAGATaGTGCCTTTGCCGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKRPTRR*CLCRRG
Trigger: GCCGCGGCGGCAAAGGCAGCATCTACGTGTGGGCCT...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGCAGATGTCCCAGAATaGCTCAGAGTGCAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTADVPE*LRVQLP
Trigger: CGGCAACTGCACTCTGAGGCATTCTGGGACATCTGC...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGATGCCTCGGGGGCAGCTaGAGATGTCCCAGAATGCCT +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGCLGGS*RCPRMP
Trigger: AGGCATTCTGGGACATCTGCAGCTGCCCCCGAGGCA...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGATGCAAACACACCAGCTaGCTCGGGGGCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGCKHTS*LGGSCR
Trigger: TCTGCAGCTGCCCCCGAGGCAGCTGGTGTGTTTGCA...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGCCTCCAGAGCCAGTaGAAACACACCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGASLQSQ*KHTSCL
Trigger: GAGGCAGCTGGTGTGTTTGCACTGGCTCTGGAGGCT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCAGCACAGTCAGATGCTaGATGTCCCGCCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLSTVRC*MSRQVR
Trigger: TCTGACCTGGCGGGACATGCAGCATCTGACTGTGCT...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAAGCACAGTCAGATGCTaGATGTCCCGCCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTSTVRC*MSRQVR
Trigger: TCTGACCTGGCGGGACATGCAGCATCTGACTGTGCT...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGGTCTCCTCTTCTGGTTaGGTTGACCGTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAEVSSSG*VDRDDS
Trigger: GCTGTCATCACGGTCAACGCAACCAGAAGAGGAGAC...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGTCTCCTCTTCTGGTTaGGTTGACCGTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGVSSSG*VDRDDS
Trigger: GCTGTCATCACGGTCAACGCAACCAGAAGAGGAGAC...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGATTCAGCACCCCCTTCTaGGGGGCGCTGCCGACAAAT +
Preference number: 4 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRFSTPF*GALPTN
Trigger: ATTTGTCGGCAGCGCCCCGCAGAAGGGGGTGCTGAA...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCTCCTCTGGGATGAATTaGATGGCCCTCTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGSSGMN*MALSWQ
Trigger: CTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGA...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGTCTAGGAGTCCTGGCTaGACCTCCAAGATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAESRSPG*TSKICL
Trigger: AAGGCAGATCTTGGAGGTGCAGCCAGGACTCCTAGA...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS-3UTR CCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGTGTTCTCCAGCATCTaGCTGGAGGGGAAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGVFSSI*LEGKPC
Trigger: GCACGGCTTCCCCTCCAGCCAGATGCTGGAGAACAC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR CCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGCTGCGTCTTCTCTTaGCCTTTGCAAGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGAGCVFS*PLQGHC
Trigger: ACAATGGCCTTGCAAAGGCCAAGAGAAGACGCAGCC...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCTCCAGCTGCTGCTTGTaGTGTAGGCTGCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLSSCCL*CRLRLL
Trigger: GAGAAGACGCAGCCTACACCACAAGCAGCAGCTGGA...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGTGCCGTACAAATCTGTaGTTGCCACACCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSECRTNL*LPHRPR
Trigger: CCGAGGCCGGTGTGGCAACCACAGATTTGTACGGCA...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCTGTCAAAGCCCACCTTaGAGTCGTCATCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGCQSPP*SRHPLD
Trigger: GTCCAAGGGATGACGACTCCAAGGTGGGCTTTGACA...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGCCACAGGAAGGGAGATaGTGCCTGGAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAPQEGR*CLERLK
Trigger: CTTCAGCCTCTCCAGGCACCATCTCCCTTCCTGTGG...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCCCGGAGCGAAGCGGCTaGGAAGCCCAGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAPERSG*EAQQET
Trigger: GGTCTCCTGCTGGGCTTCCCAGCCGCTTCGCTCCGG...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS-3UTR TCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTCAAGAAAATGATTCGTaGAGACCGGTCGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGAQENDS*RPVAQQ
Trigger: CTGCTGAGCGACCGGTCTTCACGAATCATTTTCTTG...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGATCAGCTGTGGCATATaGCTGATGGAGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEISCGI*LMEEAS
Trigger: CGAGGCCTCCTCCATCAGTCATATGCCACAGCTGAT...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGGCCGTCGTTGATGGCTaGGTTGATGGAGATGGTCCA +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAAVVDG*VDGDGP
Trigger: TGGACCATCTCCATCAACTCAGCCATCAACGACGGC...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGCCGTCGTTGATGGCTaGGTTGATGGAGATGGTCCA +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEAVVDG*VDGDGP
Trigger: TGGACCATCTCCATCAACTCAGCCATCAACGACGGC...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGACACAGGCGTCGGTTGTaGGTGTCAGCACCAACTTGC +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGHRRRL*VSAPTC
Trigger: GCAAGTTGGTGCTGACACTCACAACCGACGCCTGTG...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACACGTGTGAGTGGTCATaGAAGGCCACTTGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDTCEWS*KATCQS
Trigger: GCTTTGACAAGTGGCCTTTCATGACCACTCACACGT...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCAAAGCCGTGTTCTGCTaGAACTTGGCGAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGKAVFC*NLASFV
Trigger: GACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTT...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGTCCAAAGCCGTGTTCTaGTGCAACTTGGCGAGCTTT +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAESKAVF*CNLASF
Trigger: AAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGA...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAGCCCATCCACTGTCTTaGCGTTGTCTGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKAHPLS*RCLWGP
Trigger: GGGGCCCCACAGACAACGGCAAGACAGTGGATGGGC...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCAGGCCCACACGTAGATaGTGCCTTTGCCGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGARPTRR*CLCRRG
Trigger: GCCGCGGCGGCAAAGGCAGCATCTACGTGTGGGCCT...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGTGAGCACAGTCAGATaGTGCATGTCCCGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGVSTVR*CMSRQV
Trigger: GACCTGGCGGGACATGCAGCATCTGACTGTGCTCAC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGTTTCACCATGGCACCTaGATCAAGGACCCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAFHHGT*IKDPVA
Trigger: GGCTACGGGGTCCTTGATGCAGGTGCCATGGTGAAA...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGATTTTCTCAGGGTCCTaGACGGAGCCTCCCACACAG +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAIFSGS*TEPPTQ
Trigger: CTGTGTGGGAGGCTCCGTGCAGGACCCTGAGAAAAT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGAATTGCTAGGTGCCTaGCTGAAACGTGGAGCGAGG +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEELLGA*LKRGAR
Trigger: CCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTC...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGAATGGTCTCAGGGACTaGTTAGTTGCCGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAENGLRD*LVAEKV
Trigger: CACCTTCTCGGCAACTAAGCAGTCCCTGAGACCATT...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGTCTTGGGAATGGATGTaGATTGGGACTGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAESWEWM*IGTGDE
Trigger: CTCATCCCCAGTCCCAATGCACATCCATTCCCAAGA...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTGCGGCCGCCTTCCACTaGGAGACACAACCACCCTTC +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLAAAFH*ETQPPF
Trigger: GAAGGGTGGTTGTGTCTCCCAGTGGAAGGCGGCCGC...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262545.7
CDS-3UTR CCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCTGTTCTGCTGCAACTTaGCGAGCTTTGTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLCSAAT*RALSSP
Trigger: GGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACA...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACATGTTCTGCTGCAACTTaGCGAGCTTTGTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTCSAAT*RALSSP
Trigger: GGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACA...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGGATGTCTGTCATGAATaGCTGGTCCAGCATCCGGAT +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAEDVCHE*LVQHPD
Trigger: ATCCGGATGCTGGACCAGCCATTCATGACAGACATC...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAATCTTGCCGTTGTCTGTaGGGCCCCAGCTGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKSCRCL*GPSWRC
Trigger: ACAGCGCCAGCTGGGGCCCCACAGACAACGGCAAGA...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGAGCCTCCCACACAGTaGAATCTCTCAGGCACGGTT +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEEPPTQ*NLSGTV
Trigger: AACCGTGCCTGAGAGATTCCACTGTGTGGGAGGCTC...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGGAGCCTCCCACACAGTaGAATCTCTCAGGCACGGTT +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWEPPTQ*NLSGTV
Trigger: AACCGTGCCTGAGAGATTCCACTGTGTGGGAGGCTC...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGAACTCCACAAGAAAATaGTTCGTGAAGACCGGTCGC +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAENSTRK*FVKTGR
Trigger: GCGACCGGTCTTCACGAATCATTTTCTTGTGGAGTT...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAACTCCACAAGAAAATaGTTCGTGAAGACCGGTCGC +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDNSTRK*FVKTGR
Trigger: GCGACCGGTCTTCACGAATCATTTTCTTGTGGAGTT...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGGTTCCGTTTGGAGGTaGGCACAGTCAGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGGSVWR*AQSDAA
Trigger: TGCAGCATCTGACTGTGCTCACCTCCAAACGGAACC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACCCTTTCACCTCCCATaGCTCTTCCGGGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKPFHLP*LFRDRG
Trigger: GCCTCTGTCCCGGAAGAGTCATGGGAGGTGAAAGGG...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGCAGGTTCCTCTGGGATaGATTGCATGGCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEQVPLG*IAWPSL
Trigger: AAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTG...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCCGGTCAAATCCTTCCTaGTGCAAAGCCATCTTTACC +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGRSNPS*CKAIFT
Trigger: GGTAAAGATGGCTTTGCAGCAGGAAGGATTTGACCG...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGGGAGTGCCATCAGCTTaGCCAGTATTGATCAGATAC +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAEGVPSA*PVLIRY
Trigger: GTATCTGATCAATACTGGGCAAGCTGATGGCACTCC...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAAGCAGAAACTTCTCCTaGACATCGGGTCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGSRNFS*TSGPVA
Trigger: AGCCACGGGACCCGATGTGCAGGAGAAGTTTCTGCT...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTCGTAGATGCTGCCTTTaGCGCCGCGGCCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLRRCCL*RRGPCS
Trigger: TGAACAAGGGCCGCGGCGGCAAAGGCAGCATCTACG...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTAGATGCTGCCTTTaGCGCCGCGGCCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKRRCCL*RRGPCS
Trigger: TGAACAAGGGCCGCGGCGGCAAAGGCAGCATCTACG...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCAGAATGCCTCAGAGTaGAGTTGCCGTACAAATCTG +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAEQNASE*SCRTNL
Trigger: CAGATTTGTACGGCAACTGCACTCTGAGGCATTCTG...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGATTTCACCATGGCACCTaGATCAAGGACCCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRFHHGT*IKDPVA
Trigger: GGCTACGGGGTCCTTGATGCAGGTGCCATGGTGAAA...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCCCTTCTGCGGGGCGCTaGCGACAAATCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAPSAGR*RQIPAP
Trigger: TGGAGCTGGGATTTGTCGGCAGCGCCCCGCAGAAGG...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAATTCAGCACCCCCTTCTaGGGGGCGCTGCCGACAAAT +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKFSTPF*GALPTN
Trigger: ATTTGTCGGCAGCGCCCCGCAGAAGGGGGTGCTGAA...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGATGGAATTGCTAGGTaGCTGCCTGAAACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEDGIAR*LPETWS
Trigger: GCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGCAGGGACTGCTTAGTTaGCGAGAAGGTGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAQGLLS*REGDCV
Trigger: CACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTG...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGTCTCCAGCATCTGGCTaGAGGGGAAGCCGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMSPASG*RGSRAV
Trigger: GACTGCACGGCTTCCCCTCCAGCCAGATGCTGGAGA...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262545.7
CDS-3UTR CCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGTCTGTCATGAATGGCTaGTCCAGCATCCGGATGCCT +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSESVMNG*SSIRMP
Trigger: AGGCATCCGGATGCTGGACCAGCCATTCATGACAGA...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGTCTGTCATGAATGGCTaGTCCAGCATCCGGATGCCT +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWSVMNG*SSIRMP
Trigger: AGGCATCCGGATGCTGGACCAGCCATTCATGACAGA...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGATGTCTGTCATGAATaGCTGGTCCAGCATCCGGAT +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTDVCHE*LVQHPD
Trigger: ATCCGGATGCTGGACCAGCCATTCATGACAGACATC...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTTCTTGCCGTTGTCTGTaGGGCCCCAGCTGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSASCRCL*GPSWRC
Trigger: ACAGCGCCAGCTGGGGCCCCACAGACAACGGCAAGA...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACGCACCAACTTGCCAGTaGATGGTATTTTCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDAPTCQ*MVFSQG
Trigger: ACCCTGAGAAAATACCATCCACTGGCAAGTTGGTGC...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGTGGACATGGCCAACTTaGACTGGTAATCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAWTWPT*TGNPAP
Trigger: TGGTGCGGGATTACCAGTCCAAGTTGGCCATGTCCA...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGGCCTCAGGTTCCTCTaGGATGAATTGCATGGCCCT +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGGLRFL*DELHGP
Trigger: AGGGCCATGCAATTCATCCCAGAGGAACCTGAGGCC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGGTGCATTCTCAGACCTaGGGACGTTCCACTGCACAA +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWVHSQT*GRSTAQ
Trigger: TTGTGCAGTGGAACGTCCCCAGGTCTGAGAATGCAC...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS-3UTR TCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGATCCTTCTTTGGGAGTaGAAAGTGGTGCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAILLWE*KVVLGG
Trigger: GCCTCCTAGCACCACTTTTCACTCCCAAAGAAGGAT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR TCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTGGTTCCGTTTGGAGGTaGGCACAGTCAGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAGSVWR*AQSDAA
Trigger: TGCAGCATCTGACTGTGCTCACCTCCAAACGGAACC...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGACGTGTGAGTGGTCATaGAAGGCCACTTGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSETCEWS*KATCQS
Trigger: GCTTTGACAAGTGGCCTTTCATGACCACTCACACGT...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTTCTGTGTTGCTGGCTTaGAGGAAAGGTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQASVLLA*RKGAPG
Trigger: GCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGA...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAAAGCCGTGTTCTGCTaGAACTTGGCGAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAKAVFC*NLASFV
Trigger: GACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACTCAAATCCTTCCTGCTaGAAAGCCATCTTTACCCTG +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDSNPSC*KAIFTL
Trigger: CAGGGTAAAGATGGCTTTGCAGCAGGAAGGATTTGA...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGGAGTGCCATCAGCTTaGCCAGTATTGATCAGATAC +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTGVPSA*PVLIRY
Trigger: GTATCTGATCAATACTGGGCAAGCTGATGGCACTCC...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGAATCAAGGCCAGGAGTaGCATCAGCTTGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSENQGQE*HQLAQY
Trigger: ATACTGGGCAAGCTGATGGCACTCCTGGCCTTGATT...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTCGTAGATGCTGCCTTTaGCGCCGCGGCCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSARRCCL*RRGPCS
Trigger: TGAACAAGGGCCGCGGCGGCAAAGGCAGCATCTACG...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGGAGATGGTCCACATaGTGGAGGCGTAGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAWRWST*WRRSRR
Trigger: GCGACGGCTACGCCTCCAGCATGTGGACCATCTCCA...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTGCAGATGTCCCAGAATaGCTCAGAGTGCAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAADVPE*LRVQLP
Trigger: CGGCAACTGCACTCTGAGGCATTCTGGGACATCTGC...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGATGGAATTGCTAGGTaGCTGCCTGAAACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGDGIAR*LPETWS
Trigger: GCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGATCCTCTGGGATGAATTaGATGGCCCTCTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGSSGMN*MALSWQ
Trigger: CTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGA...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGATGTTCTGCTGCAACTTaGCGAGCTTTGTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGCSAAT*RALSSP
Trigger: GGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACA...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTTCCAGCTGCTGCTTGTaGTGTAGGCTGCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQASSCCL*CRLRLL
Trigger: GAGAAGACGCAGCCTACACCACAAGCAGCAGCTGGA...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCCACAGATATTGTTGTTaGCGGCAGCAGAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGHRYCC*RQQKLL
Trigger: GAGAAGTTTCTGCTGCCGCCAACAACAATATCTGTG...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCACAGATATTGTTGTTaGCGGCAGCAGAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAEHRYCC*RQQKLL
Trigger: GAGAAGTTTCTGCTGCCGCCAACAACAATATCTGTG...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGATGTCTGTCATGAATaGCTGGTCCAGCATCCGGAT +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEDVCHE*LVQHPD
Trigger: ATCCGGATGCTGGACCAGCCATTCATGACAGACATC...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTCTGTGGGGCCCCAGCTaGCGCTGTAGATGTCAATCA +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLLWGPS*RCRCQS
Trigger: TGATTGACATCTACAGCGCCAGCTGGGGCCCCACAG...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACACAACTTGCCAGTGGATaGTATTTTCTCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTQLASG*YFLRVL
Trigger: CAGGACCCTGAGAAAATACCATCCACTGGCAAGTTG...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGATGTCAAAGCCCACCTTaGAGTCGTCATCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGCQSPP*SRHPLD
Trigger: GTCCAAGGGATGACGACTCCAAGGTGGGCTTTGACA...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCCCTCTTTCTTGGACATaGCCAACTTGGACTGGTAAT +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGPLSWT*PTWTGN
Trigger: ATTACCAGTCCAAGTTGGCCATGTCCAAGAAAGAGG...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGCCAGCTCCTCTTTCTTaGACATGGCCAACTTGGACT +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWPAPLS*TWPTWT
Trigger: AGTCCAAGTTGGCCATGTCCAAGAAAGAGGAGCTGG...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGCACTCATGCTTCCTaGATCTCTTTCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGASTHAS*ISFPMQ
Trigger: CTGCATGGGGAAAGAGATCCAGGAAGCATGAGTGCT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGGGAGCCCCAGAAAATTaGGGCTGGGATGAACTCTAT +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAGAPEN*GWDELY
Trigger: ATAGAGTTCATCCCAGCCCCAATTTTCTGGGGCTCC...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGAATGACATCAAACTGTaGGGGAGTATGAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: GIARCLPETWSEDRGGAGNDIKL*GSMRFL
Trigger: GAGAAATCTCATACTCCCCCACAGTTTGATGTCATT...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACCACAGGAAGGGAGATaGTGCCTGGAGAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKPQEGR*CLERLK
Trigger: CTTCAGCCTCTCCAGGCACCATCTCCCTTCCTGTGG...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGTGCTCTGTGTTGCTaGCTTGAAGGAAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGASALCC*LEGKVL
Trigger: GAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGAGTGCTCTGTGTTGCTaGCTTGAAGGAAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSESALCC*LEGKVL
Trigger: GAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACT...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCTATAGAGAAAGAGACTaGACAGGGTCTTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: TGDGIARCLPETWSEDRGYRERD*TGSWKA
Trigger: TGCTTTCCAAGACCCTGTTCAGTCTCTTTCTCTATA...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR TCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAAGGGGTCGTTGCTGCTaGAGTCGTAACTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKRGRCC*SRNLLR
Trigger: CCGAAGCAAGTTACGACTTCAGCAGCAACGACCCCT...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGATCAGCTGTGGCATATaGCTGATGGAGGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMISCGI*LMEEAS
Trigger: CGAGGCCTCCTCCATCAGTCATATGCCACAGCTGAT...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGTTTTCCTCCCGTTGCTaGAGGTGGAAGCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMFSSRC*RWKPRW
Trigger: CCACCTTGGCTTCCACCTTCAGCAACGGGAGGAAAA...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGGGTTCCGTTTGGAGGTaGGCACAGTCAGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMGSVWR*AQSDAA
Trigger: TGCAGCATCTGACTGTGCTCACCTCCAAACGGAACC...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGATCCAAAGCCGTGTTCTaGTGCAACTTGGCGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGSKAVF*CNLASF
Trigger: AAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGA...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAAATCAAGGCCAGGAGTaGCATCAGCTTGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGNQGQE*HQLAQY
Trigger: ATACTGGGCAAGCTGATGGCACTCCTGGCCTTGATT...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCCTCAGAGTGCAGTTaGCGTACAAATCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGASECS*RTNLWL
Trigger: CAACCACAGATTTGTACGGCAACTGCACTCTGAGGC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAGCAGATGTCCCAGAATaGCTCAGAGTGCAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKADVPE*LRVQLP
Trigger: CGGCAACTGCACTCTGAGGCATTCTGGGACATCTGC...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTTGCAAACACACCAGCTaGCTCGGGGGCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLCKHTS*LGGSCR
Trigger: TCTGCAGCTGCCCCCGAGGCAGCTGGTGTGTTTGCA...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCGTGAGCACAGTCAGATaGTGCATGTCCCGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAVSTVR*CMSRQV
Trigger: GACCTGGCGGGACATGCAGCATCTGACTGTGCTCAC...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTGTCTCCTCTTCTGGTTaGGTTGACCGTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAVSSSG*VDRDDS
Trigger: GCTGTCATCACGGTCAACGCAACCAGAAGAGGAGAC...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGAGAAGGTGACTGTGTaGTTTCCTCACAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEEKVTV*FPHRGL
Trigger: AAGACCTCTGTGAGGAAAGCACACAGTCACCTTCTC...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGCAGGGGTGCGAATGTaGGGAGCTGTGTGTACCGGA +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLAGVRM*GAVCTG
Trigger: TCCGGTACACACAGCTCCCCACATTCGCACCCCTGC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262545.7
CDS-3UTR CCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTGGCTGCGTCTTCTCTTaGCCTTTGCAAGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAGCVFS*PLQGHC
Trigger: ACAATGGCCTTGCAAAGGCCAAGAGAAGACGCAGCC...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACTTCGGCATTATAGTTaGAGGCCAGGTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKLRHYS*RPGPGG
Trigger: TCCACCCGGACCTGGCCTCCAACTATAATGCCGAAG...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGGCACCAACTTGCCAGTaGATGGTATTTTCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAAPTCQ*MVFSQG
Trigger: ACCCTGAGAAAATACCATCCACTGGCAAGTTGGTGC...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAGGAGTCGTCATCCCTTaGACGCCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKGVVIP*TPAQQN
Trigger: ATTTTGCTGAGCCGGCGTCCAAGGGATGACGACTCC...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTCCTTGTTTGAGACCATaGACAATTGTTCTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGAPCLRP*TIVLGV
Trigger: GACTCCAAGAACAATTGTCCATGGTCTCAAACAAGG...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTGGCCTCAGGTTCCTCTaGGATGAATTGCATGGCCCT +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLGLRFL*DELHGP
Trigger: AGGGCCATGCAATTCATCCCAGAGGAACCTGAGGCC...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGCATTTCTTGGGAATaGATGTGCATTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGASISWE*MCIGTG
Trigger: CCCAGTCCCAATGCACATCCATTCCCAAGAAATGCT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACATATAGAGAAAGAGACTaGACAGGGTCTTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTYRERD*TGSWKA
Trigger: TGCTTTCCAAGACCCTGTTCAGTCTCTTTCTCTATA...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR TCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTACGTGTGAGTGGTCATaGAAGGCCACTTGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQATCEWS*KATCQS
Trigger: GCTTTGACAAGTGGCCTTTCATGACCACTCACACGT...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGGGTCTCTCTCCAGCTaGTGCTTGTGGTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLGSLSS*CLWCRL
Trigger: CAGCCTACACCACAAGCAGCAGCTGGAGAGAGACCC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGCTGAAGTCGTAACTTaGTTCGGCATTATAGTTGGA +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTAEVVT*FGIIVG
Trigger: TCCAACTATAATGCCGAAGCAAGTTACGACTTCAGC...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAAACCTTGGAGTTGTATaGTACTCCAACTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: PVRVMELLGACLKRGARTNLGVV*YSNSTD
Trigger: ATCTGTGGAGTTGGAGTAGCATACAACTCCAAGGTT...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTCAGCATCCGGATGCCTaGAACCTTGGAGTTGTATGC +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLQHPDA*NLGVVC
Trigger: GCATACAACTCCAAGGTTGCAGGCATCCGGATGCTG...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTGGTCCAGCATCCGGATaGCTGCAACCTTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAGPASG*LQPWSC
Trigger: ACAACTCCAAGGTTGCAGGCATCCGGATGCTGGACC...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCAGCACAGTCAGATGCTaGATGTCCCGCCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGASTVRC*MSRQVR
Trigger: TCTGACCTGGCGGGACATGCAGCATCTGACTGTGCT...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCATTTTCTCAGGGTCCTaGACGGAGCCTCCCACACAG +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAIFSGS*TEPPTQ
Trigger: CTGTGTGGGAGGCTCCGTGCAGGACCCTGAGAAAAT...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGTGTCAGCACCAACTTaGCAGTGGATGGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEVSAPT*QWMVFS
Trigger: AGAAAATACCATCCACTGGCAAGTTGGTGCTGACAC...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTAATGGTCTCAGGGACTaGTTAGTTGCCGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQANGLRD*LVAEKV
Trigger: CACCTTCTCGGCAACTAAGCAGTCCCTGAGACCATT...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTTCTTGGGAATGGATGTaGATTGGGACTGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQASWEWM*IGTGDE
Trigger: CTCATCCCCAGTCCCAATGCACATCCATTCCCAAGA...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGGGCTTGAAGGAAAGGTaGTCCAGGCTAAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMGLKER*SRLSSL
Trigger: CAGAGAGCTTAGCCTGGAGCACCTTTCCTTCAAGCC...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGCACAGATATTGTTGTTaGCGGCAGCAGAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWHRYCC*RQQKLL
Trigger: GAGAAGTTTCTGCTGCCGCCAACAACAATATCTGTG...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGAGCACCAACTTGCCAGTaGATGGTATTTTCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRAPTCQ*MVFSQG
Trigger: ACCCTGAGAAAATACCATCCACTGGCAAGTTGGTGC...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCGGAGTCGTCATCCCTTaGACGCCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAGVVIP*TPAQQN
Trigger: ATTTTGCTGAGCCGGCGTCCAAGGGATGACGACTCC...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTTGTCAAAGCCCACCTTaGAGTCGTCATCCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLCQSPP*SRHPLD
Trigger: GTCCAAGGGATGACGACTCCAAGGTGGGCTTTGACA...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGAGGACATGGATGTTGTTaGGAACGCTATATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRGHGCC*ERYIWG
Trigger: GCCCCAAATATAGCGTTCCCAACAACATCCATGTCC...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGGGCTCTCTATGAATaGCATCTTTTGAATCACATC +
Preference number: 4 (lower is better)
Translates to: ACTGDGIARCLPETWSEDRALYE*HLLNHI
Trigger: GATGTGATTCAAAAGATGCCATTCATAGAGAGCCCT...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTAGCACTCATGCTTCCTaGATCTCTTTCCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQASTHAS*ISFPMQ
Trigger: CTGCATGGGGAAAGAGATCCAGGAAGCATGAGTGCT...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAATGCATGGCCCTCTCTTaGCAGAAGAGGCTCCATACA +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKCMALS*QKRLHT
Trigger: TGTATGGAGCCTCTTCTGCCAAGAGAGGGCCATGCA...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTTGCATGGCCCTCTCTTaGCAGAAGAGGCTCCATACA +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLCMALS*QKRLHT
Trigger: TGTATGGAGCCTCTTCTGCCAAGAGAGGGCCATGCA...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGTTGGTAATGTCTAGTTaGGAATGGAGTGGTGACTTT +
Preference number: 4 (lower is better)
Translates to: VMELLGACLKRGARTEAELVMSS*EWSGDF
Trigger: AAAGTCACCACTCCATTCCCAACTAGACATTACCAA...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTTTGGTAATGTCTAGTTaGGAATGGAGTGGTGACTTT +
Preference number: 4 (lower is better)
Translates to: DGIARCLPETWSEDRGGALVMSS*EWSGDF
Trigger: AAAGTCACCACTCCATTCCCAACTAGACATTACCAA...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGCACCTGAATTTCCACTaGCCTTTTTCAGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEHLNFH*PFSARI
Trigger: GATTCTGGCTGAAAAAGGCCAGTGGAAATTCAGGTG...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 72 bp CTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTaGGCAGAAGAGGCTCCATACAACTGGAGAACTATG +
Preference number: 4 (lower is better)
Translates to: LRFLWDELHGPL*AEEAPYNWRTM
Trigger: CATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 72 bp TTCAGGGAATTGAACCTAGTGCTCTGTGTTGCTGGCTaGAAGGAAAGGTGCTCCAGGCTAAGCTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FRELNLVLCVAG*KERCSRLSSLL
Trigger: GAGCAGAGAGCTTAGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTATCCTTCTTTGGGAGTaGAAAGTGGTGCTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLILLWE*KVVLGG
Trigger: GCCTCCTAGCACCACTTTTCACTCCCAAAGAAGGAT...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262545.7
CDS-3UTR TCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCCAGGTTCCTCTGGGATaGATTGCATGGCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAQVPLG*IAWPSL
Trigger: AAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTG...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTTCTGTGTTGCTGGCTTaGAGGAAAGGTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLSVLLA*RKGAPG
Trigger: GCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGA...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCGCTTGTGGTGTAGGCTaGGTCTTCTCTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAACGVG*VFSWPL
Trigger: CAAAGGCCAAGAGAAGACGCAGCCTACACCACAAGC...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGTGTCAGCACCAACTTaGCAGTGGATGGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGVSAPT*QWMVFS
Trigger: AGAAAATACCATCCACTGGCAAGTTGGTGCTGACAC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGCTTCACCAGGTGTGTTaGCAGGCTTGTCTTAATTTT +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSELHQVC*QACLNF
Trigger: AAAATTAAGACAAGCCTGGCAACACACCTGGTGAAG...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCCAGGGACTGCTTAGTTaGCGAGAAGGTGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAQGLLS*REGDCV
Trigger: CACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTG...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTGGCTTGAAGGAAAGGTaGTCCAGGCTAAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAGLKER*SRLSSL
Trigger: CAGAGAGCTTAGCCTGGAGCACCTTTCCTTCAAGCC...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTCTGTCATGAATGGCTaGTCCAGCATCCGGATGCCT +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGASVMNG*SSIRMP
Trigger: AGGCATCCGGATGCTGGACCAGCCATTCATGACAGA...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGATGTCAATCAGCTGTaGCATATGACTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGDVNQL*HMTDGG
Trigger: TCCTCCATCAGTCATATGCCACAGCTGATTGACATC...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGGAGTCGTCATCCCTTaGACGCCGGCTCAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLGVVIP*TPAQQN
Trigger: ATTTTGCTGAGCCGGCGTCCAAGGGATGACGACTCC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTTGGACATGGCCAACTTaGACTGGTAATCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAWTWPT*TGNPAP
Trigger: TGGTGCGGGATTACCAGTCCAAGTTGGCCATGTCCA...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGTGCTTTCAGAGATGTaGCGCTCACACCCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLVLSEM*RSHPVL
Trigger: GAGGACAGGGTGTGAGCGCCACATCTCTGAAAGCAC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGGGAGCCCCAGAAAATTaGGGCTGGGATGAACTCTAT +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMGAPEN*GWDELY
Trigger: ATAGAGTTCATCCCAGCCCCAATTTTCTGGGGCTCC...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAAACTCCACAAGAAAATaGTTCGTGAAGACCGGTCGC +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKNSTRK*FVKTGR
Trigger: GCGACCGGTCTTCACGAATCATTTTCTTGTGGAGTT...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR TCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGCCCTGTCCTCAGCTTTaGTTTTCTTGTTATGTAACA +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEPCPQL*FSCYVT
Trigger: TGTTACATAACAAGAAAATCAAAGCTGAGGACAGGG...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGGAACTCTATACAAACTaGGAAAAATTTGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWELYTN*EKFGLL
Trigger: GAGCAGCCCAAATTTTTCTCAGTTTGTATAGAGTTC...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCGTTTATACAGAGAGCTaGAAAATTACAGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLVYTES*KITEVM
Trigger: CATCACCTCTGTAATTTTTCAGCTCTCTGTATAAAC...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGGTCAAATCCTTCCTaGTGCAAAGCCATCTTTACC +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKRSNPS*CKAIFT
Trigger: GGTAAAGATGGCTTTGCAGCAGGAAGGATTTGACCG...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCTTGATCAGATACCACTaGTTTGTAAAAAGAGGATCG +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLLIRYH*FVKRGS
Trigger: CGATCCTCTTTTTACAAAGCAGTGGTATCTGATCAA...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAGGAGTGCCATCAGCTTaGCCAGTATTGATCAGATAC +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKGVPSA*PVLIRY
Trigger: GTATCTGATCAATACTGGGCAAGCTGATGGCACTCC...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTAATCAAGGCCAGGAGTaGCATCAGCTTGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSANQGQE*HQLAQY
Trigger: ATACTGGGCAAGCTGATGGCACTCCTGGCCTTGATT...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGAAACCTTGGAGTTGTATaGTACTCCAACTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRNLGVV*YSNSTD
Trigger: ATCTGTGGAGTTGGAGTAGCATACAACTCCAAGGTT...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACAGAATGCCTCAGAGTaGAGTTGCCGTACAAATCTG +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKQNASE*SCRTNL
Trigger: CAGATTTGTACGGCAACTGCACTCTGAGGCATTCTG...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGATGGAATTGCTAGGTaGCTGCCTGAAACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLDGIAR*LPETWS
Trigger: GCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTGAGAAGGTGACTGTGTaGTTTCCTCACAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLEKVTV*FPHRGL
Trigger: AAGACCTCTGTGAGGAAAGCACACAGTCACCTTCTC...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCGAAGACAGAAATCCATaGCAATATGGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLEDRNP*QYGRKE
Trigger: TTCTTTTCTCCCATATTGGCATGGATTTCTGTCTTC...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAGGATGCCTGCAACCTTaGAGTTGTATGCTACTCCAA +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKGCLQP*SCMLLQ
Trigger: TTGGAGTAGCATACAACTCCAAGGTTGCAGGCATCC...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTGGATGCCTGCAACCTTaGAGTTGTATGCTACTCCAA +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLGCLQP*SCMLLQ
Trigger: TTGGAGTAGCATACAACTCCAAGGTTGCAGGCATCC...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGCAACTTGCCAGTGGATaGTATTTTCTCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMQLASG*YFLRVL
Trigger: CAGGACCCTGAGAAAATACCATCCACTGGCAAGTTG...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTTGGACATGGCCAACTTaGACTGGTAATCCCGCACCA +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLWTWPT*TGNPAP
Trigger: TGGTGCGGGATTACCAGTCCAAGTTGGCCATGTCCA...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGATGGACAATTGTTCTTaGAGTCACTCTATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGAMDNCS*SHSMWL
Trigger: AAGCCACATAGAGTGACTCCAAGAACAATTGTCCAT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGACCTTGTTTGAGACCATaGACAATTGTTCTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRPCLRP*TIVLGV
Trigger: GACTCCAAGAACAATTGTCCATGGTCTCAAACAAGG...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAATGACATCAAACTGTaGGGGAGTATGAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: ELPVRVMELLGACLKRGANDIKL*GSMRFL
Trigger: GAGAAATCTCATACTCCCCCACAGTTTGATGTCATT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGAGCATTTCTTGGGAATaGATGTGCATTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMSISWE*MCIGTG
Trigger: CCCAGTCCCAATGCACATCCATTCCCAAGAAATGCT...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 72 bp GCTGAAGACAAAGCATTTCTTGGGAATGGATGTGCATaGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: AEDKAFLGNGCA*GLGMRSNLWVG
Trigger: ACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTCCCAAGAAATGCTTTGTCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAATTGGGAATGGAGTGGTaGCTTTTGGGATTGACCATA +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKLGMEW*LLGLTI
Trigger: TATGGTCAATCCCAAAAGTCACCACTCCATTCCCAA...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCCGGTCAAATCCTTCCTaGTGCAAAGCCATCTTTACC +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGARSNPS*CKAIFT
Trigger: GGTAAAGATGGCTTTGCAGCAGGAAGGATTTGACCG...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGTTGATCAGATACCACTaGTTTGTAAAAAGAGGATCG +
Preference number: 4 (lower is better)
Translates to: DGIACTGDGIARCLPETWLIRYH*FVKRGS
Trigger: CGATCCTCTTTTTACAAAGCAGTGGTATCTGATCAA...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCCAGAATGCCTCAGAGTaGAGTTGCCGTACAAATCTG +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAQNASE*SCRTNL
Trigger: CAGATTTGTACGGCAACTGCACTCTGAGGCATTCTG...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAAATATCCAGCACTCATaGTTCCTGGATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKNIQHS*FLDLFP
Trigger: GGGAAAGAGATCCAGGAAGCATGAGTGCTGGATATT...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGAAGACAGAAATCCATaGCAATATGGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: IACTGDGIARCLPETWSEEDRNP*QYGRKE
Trigger: TTCTTTTCTCCCATATTGGCATGGATTTCTGTCTTC...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGATCAAATCCTTCCTGCTaGAAAGCCATCTTTACCTTT +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGSNPSC*KAIFTF
Trigger: AAAGGTAAAGATGGCTTTGCAGCAGGAAGGATTTGA...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536609.1
CDS-3UTR CCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGGATGTCAATCAGCTGTaGCATATGACTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMDVNQL*HMTDGG
Trigger: TCCTCCATCAGTCATATGCCACAGCTGATTGACATC...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCGGACATGGATGTTGTTaGGAACGCTATATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAGHGCC*ERYIWG
Trigger: GCCCCAAATATAGCGTTCCCAACAACATCCATGTCC...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAAGGGCTCTCTATGAATaGCATCTTTTGAATCACATC +
Preference number: 4 (lower is better)
Translates to: TELPVRVMELLGACLKRGRALYE*HLLNHI
Trigger: GATGTGATTCAAAAGATGCCATTCATAGAGAGCCCT...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTAAATTGGGGCTGGGATaGACTCTATACAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLKLGLG*TLYKLR
Trigger: TCTCAGTTTGTATAGAGTTCATCCCAGCCCCAATTT...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTAACCTTGGAGTTGTATaGTACTCCAACTCCACAGAT +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLNLGVV*YSNSTD
Trigger: ATCTGTGGAGTTGGAGTAGCATACAACTCCAAGGTT...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTAATATCCAGCACTCATaGTTCCTGGATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSANIQHS*FLDLFP
Trigger: GGGAAAGAGATCCAGGAAGCATGAGTGCTGGATATT...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTCTTCACCAGGTGTGTTaGCAGGCTTGTCTTAATTTT +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLLHQVC*QACLNF
Trigger: AAAATTAAGACAAGCCTGGCAACACACCTGGTGAAG...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTGATGTCAATCAGCTGTaGCATATGACTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSADVNQL*HMTDGG
Trigger: TCCTCCATCAGTCATATGCCACAGCTGATTGACATC...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTCAACTTGCCAGTGGATaGTATTTTCTCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLQLASG*YFLRVL
Trigger: CAGGACCCTGAGAAAATACCATCCACTGGCAAGTTG...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCCCTCTTTCTTGGACATaGCCAACTTGGACTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAPLSWT*PTWTGN
Trigger: ATTACCAGTCCAAGTTGGCCATGTCCAAGAAAGAGG...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTGGGTTGCATGTTAAATaGTCTCAGGGACTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAGLHVK*SQGLLS
Trigger: ACTAAGCAGTCCCTGAGACCATTTAACATGCAACCC...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTATGAGAAGCAATCTCTaGGTAGGTCACTTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAMRSNL*VGHFGN
Trigger: ATTACCAAAGTGACCTACCCAGAGATTGCTTCTCAT...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGAGACAAAGCATTTCTTaGGAATGGATGTGCATTGGG +
Preference number: 4 (lower is better)
Translates to: NYVKIALASSNVPLSPPMRQSIS*EWMCIG
Trigger: CCCAATGCACATCCATTCCCAAGAAATGCTTTGTCT...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTCACCTGAATTTCCACTaGCCTTTTTCAGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAHLNFH*PFSARI
Trigger: GATTCTGGCTGAAAAAGGCCAGTGGAAATTCAGGTG...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTTCAAATCCTTCCTGCTaGAAAGCCATCTTTACCCTG +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLSNPSC*KAIFTL
Trigger: CAGGGTAAAGATGGCTTTGCAGCAGGAAGGATTTGA...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTTTGATCAGATACCACTaGTTTGTAAAAAGAGGATCG +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQALIRYH*FVKRGS
Trigger: CGATCCTCTTTTTACAAAGCAGTGGTATCTGATCAA...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCGCTGAAGTCGTAACTTaGTTCGGCATTATAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGAAEVVT*FGIIVG
Trigger: TCCAACTATAATGCCGAAGCAAGTTACGACTTCAGC...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR GCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGTGTCAGCACCAACTTaGCAGTGGATGGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLVSAPT*QWMVFS
Trigger: AGAAAATACCATCCACTGGCAAGTTGGTGCTGACAC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGGGTTGCATGTTAAATaGTCTCAGGGACTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLGLHVK*SQGLLS
Trigger: ACTAAGCAGTCCCTGAGACCATTTAACATGCAACCC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCAGACAAAGCATTTCTTaGGAATGGATGTGCATTGGG +
Preference number: 4 (lower is better)
Translates to: LQIKKTELPVRVMELLGARQSIS*EWMCIG
Trigger: CCCAATGCACATCCATTCCCAAGAAATGCTTTGTCT...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTACAGAGGTGATGCAATaGGAATTGATGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: GIEPSALCCWLEGKVLQATEVMQ*ELMNIF
Trigger: GAAAATGTTCATCAATTCCCATTGCATCACCTCTGT...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 72 bp TTTCAGAGATGTGGCGCTCACACCCTGTCCTCAGCTTaGATTTTCTTGTTATGTAACAGCCCCTTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: FQRCGAHTLSSA*IFLLCNSPLFE
Trigger: CTCAAACAAGGGGCTGTTACATAACAAGAAAATCAAAGCTGAGGACAGGGTGTGAGCGCCACATCTCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
3UTR CAA 72 bp TCAGATTTCTCTCTTAAAGTGGCCACCTTCAGGGAATaGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SDFSLKVATFRE*NLVLCVAGLKE
Trigger: TTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCCCTGAAGGTGGCCACTTTAAGAGAGAAATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTCCCTGTCCTCAGCTTTaGTTTTCTTGTTATGTAACA +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAPCPQL*FSCYVT
Trigger: TGTTACATAACAAGAAAATCAAAGCTGAGGACAGGG...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR GCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGCTGAAGTCGTAACTTaGTTCGGCATTATAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLAEVVT*FGIIVG
Trigger: TCCAACTATAATGCCGAAGCAAGTTACGACTTCAGC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTATGGACAATTGTTCTTaGAGTCACTCTATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAMDNCS*SHSMWL
Trigger: AAGCCACATAGAGTGACTCCAAGAACAATTGTCCAT...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTACAGAGGTGATGCAATaGGAATTGATGAACATTTTC +
Preference number: 4 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLTEVMQ*ELMNIF
Trigger: GAAAATGTTCATCAATTCCCATTGCATCACCTCTGT...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGAACTCTATACAAACTaGGAAAAATTTGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLELYTN*EKFGLL
Trigger: GAGCAGCCCAAATTTTTCTCAGTTTGTATAGAGTTC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CCA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAATGGAGTCACTCTATGTaGCTTTTAAAATACGTTCTT +
Preference number: 4 (lower is better)
Translates to: KKTELPVRVMELLGACLKWSHSM*LLKYVL
Trigger: AAGAACGTATTTTAAAAGCCACATAGAGTGACTCCA...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR TCA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTGTTTATACAGAGAGCTaGAAAATTACAGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLVYTES*KITEVM
Trigger: CATCACCTCTGTAATTTTTCAGCTCTCTGTATAAAC...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS GCA 90 bp GCGAATCAGTGTGTGTTCTCCAGCATCTGGCTGGAGGGGAAGCCGTaGAGTCAGGCGGCCCGGCGCGCGGGCAGGGGTGCGAATGTGGGG +
Preference number: 5 (lower is better)
Translates to: ANQCVFSSIWLEGKP*SQAARRAGRGANVG
Trigger: CCCCACATTCGCACCCCTGCCCGCGCGCCGGGCCGCCTGACTGCACGGCTTCCCCTCCAGCCAGATGCTGGAGAACACACACTGATTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS TCA 90 bp GCTGGGAAGCCCAGCAGGAGACCCGGCTCGCCCCACCCGCGATGGTaGCTGGAGGAGGCTCCTCTAGGAGTCCTGGCTGCACCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: AGKPSRRPGSPHPRW*LEEAPLGVLAAPPR
Trigger: TCTTGGAGGTGCAGCCAGGACTCCTAGAGGAGCCTCCTCCAGTCACCATCGCGGGTGGGGCGAGCCGGGTCTCCTGCTGGGCTTCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS GCA 90 bp GCAGCATCAGGGTCCACTCCTTCAGCACCCCCTTCTGCGGGGCGCTaGCGACAAATCCCAGCTCCAGGGTCCAGGTGCCTCGGGCGTCTT +
Preference number: 5 (lower is better)
Translates to: AASGSTPSAPPSAGR*RQIPAPGSRCLGRL
Trigger: AAGACGCCCGAGGCACCTGGACCCTGGAGCTGGGATTTGTCGGCAGCGCCCCGCAGAAGGGGGTGCTGAAGGAGTGGACCCTGATGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000459871.1
ENST00000536609.1
CDS GCA 90 bp ACTGGAGGAGGCTCCTCTAGGAGTCCTGGCTGCACCTCCAAGATCTaGCTTCAGGAGAGACGCGGCCGGGGTGGACACGGCGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: TGGGSSRSPGCTSKI*LQERRGRGGHGGRC
Trigger: GCACCTCCCGCCGTGTCCACCCCGGCCGCGTCTCTCCTGAAGGCAGATCTTGGAGGTGCAGCCAGGACTCCTAGAGGAGCCTCCTCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS CCA 90 bp GGTCTTGGAAAGCAGCGAATCAGTGTGTGTTCTCCAGCATCTGGCTaGAGGGGAAGCCGTGCAGTCAGGCGGCCCGGCGCGCGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GLGKQRISVCSPASG*RGSRAVRRPGARAG
Trigger: CCCTGCCCGCGCGCCGGGCCGCCTGACTGCACGGCTTCCCCTCCAGCCAGATGCTGGAGAACACACACTGATTCGCTGCTTTCCAAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS GCA 90 bp CCACCCGCGATGGTGACTGGAGGAGGCTCCTCTAGGAGTCCTGGCTaGACCTCCAAGATCTGCCTTCAGGAGAGACGCGGCCGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: PPAMVTGGGSSRSPG*TSKICLQERRGRGG
Trigger: TCCACCCCGGCCGCGTCTCTCCTGAAGGCAGATCTTGGAGGTGCAGCCAGGACTCCTAGAGGAGCCTCCTCCAGTCACCATCGCGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS CCA 90 bp ACAGGGTCTTGGAAAGCAGCGAATCAGTGTGTGTTCTCCAGCATCTaGCTGGAGGGGAAGCCGTGCAGTCAGGCGGCCCGGCGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: TGSWKAANQCVFSSI*LEGKPCSQAARRAG
Trigger: GCCCGCGCGCCGGGCCGCCTGACTGCACGGCTTCCCCTCCAGCCAGATGCTGGAGAACACACACTGATTCGCTGCTTTCCAAGACCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS GCA 90 bp ATCTGCCTTCAGGAGAGACGCGGCCGGGGTGGACACGGCGGGAGGTaGATTCTCAGACCTGGGGACGTTCCACTGCACAAGGACAGCGAG +
Preference number: 5 (lower is better)
Translates to: ICLQERRGRGGHGGR*ILRPGDVPLHKDSE
Trigger: CTCGCTGTCCTTGTGCAGTGGAACGTCCCCAGGTCTGAGAATGCACCTCCCGCCGTGTCCACCCCGGCCGCGTCTCTCCTGAAGGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS CCA 90 bp TGGCTGCACCTCCAAGATCTGCCTTCAGGAGAGACGCGGCCGGGGTaGACACGGCGGGAGGTGCATTCTCAGACCTGGGGACGTTCCACT +
Preference number: 5 (lower is better)
Translates to: WLHLQDLPSGETRPG*TRREVHSQTWGRST
Trigger: AGTGGAACGTCCCCAGGTCTGAGAATGCACCTCCCGCCGTGTCCACCCCGGCCGCGTCTCTCCTGAAGGCAGATCTTGGAGGTGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS-3UTR CAA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTTTGCCGCCGCGGCCCTaGTTCACGCCATCGGCCATG +
Preference number: 5 (lower is better)
Translates to: DGIARCLPETWSEDRGGALPPRP*FTPSAM
Trigger: CATGGCCGATGGCGTGAACAAGGGCCGCGGCGGCAA...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACTTGCCGCCGCGGCCCTaGTTCACGCCATCGGCCATG +
Preference number: 5 (lower is better)
Translates to: ACTGDGIARCLPETWSEDLPPRP*FTPSAM
Trigger: CATGGCCGATGGCGTGAACAAGGGCCGCGGCGGCAA...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS TCA 90 bp GCCGCCACTGATGGACCTCGTCGTGAAGCTGGTTCCGTTTGGAGGTaGGCACAGTCAGATGCTGCATGTCCCGCCAGGTCAGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: AATDGPRREAGSVWR*AQSDAACPARSDPG
Trigger: GCCTGGGTCTGACCTGGCGGGACATGCAGCATCTGACTGTGCTCACCTCCAAACGGAACCAGCTTCACGACGAGGTCCATCAGTGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS TCA 90 bp GCCTTCCACTGGGAGACACAACCACCCTTCATCCTTCTTTGGGAGTaGAAAGTGGTGCTAGGAGGCGCGCAGGCTGGCGGAGCAGGGGAC +
Preference number: 5 (lower is better)
Translates to: AFHWETQPPFILLWE*KVVLGGAQAGGAGD
Trigger: GTCCCCTGCTCCGCCAGCCTGCGCGCCTCCTAGCACCACTTTTCACTCCCAAAGAAGGATGAAGGGTGGTTGTGTCTCCCAGTGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS TCA 90 bp CTGTGGTTGCCACACCGGCCTCGGGGTTCCTTTTCCTCCCGTTGCTaGAGGTGGAAGCCAAGGTGGAAGAGCAGCTCTCGTCGTACAGGG +
Preference number: 5 (lower is better)
Translates to: LWLPHRPRGSFSSRC*RWKPRWKSSSRRTG
Trigger: CCCTGTACGACGAGAGCTGCTCTTCCACCTTGGCTTCCACCTTCAGCAACGGGAGGAAAAGGAACCCCGAGGCCGGTGTGGCAACCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS TCA 90 bp GCCGCCACTGATGGACCTCGTCGTGAAGCTGGTTCCGTTTGGAGGTaGGCACAGTCAGATGCTGCATGTCCCGCCAGGTCAGACCCAGGT +
Preference number: 5 (lower is better)
Translates to: AATDGPRREAGSVWR*AQSDAACPARSDPG
Trigger: ACCTGGGTCTGACCTGGCGGGACATGCAGCATCTGACTGTGCTCACCTCCAAACGGAACCAGCTTCACGACGAGGTCCATCAGTGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 90 bp ACTGGTAATCCCGCACCACCTGGTCGATGTACGGGGCACTCTGAGTaGCATGCAGCATCAGGGTCCACTCCTTCAGCACCCCCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: TGNPAPPGRCTGHSE*HAASGSTPSAPPSA
Trigger: CGCAGAAGGGGGTGCTGAAGGAGTGGACCCTGATGCTGCATGGCACTCAGAGTGCCCCGTACATCGACCAGGTGGTGCGGGATTACCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000459871.1
ENST00000536609.1
CDS CCA 90 bp ACTTCTTGGAATGGGGATCCCCACGCTCTAGTGGGAAAGCCAGGCTaGCCGCCCACGCATCAGGAGAGGACACCTCGACTTCTCCGTAGG +
Preference number: 5 (lower is better)
Translates to: TSWNGDPHALVGKPG*PPTHQERTPRLLRR
Trigger: CCTACGGAGAAGTCGAGGTGTCCTCTCCTGATGCGTGGGCGGCCAGCCTGGCTTTCCCACTAGAGCGTGGGGATCCCCATTCCAAGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470007.1
CDS-3UTR CAA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGCTCTCCAGCTGCTGCTaGTGGTGTAGGCTGCGTCTT +
Preference number: 5 (lower is better)
Translates to: GIARCLPETWSEDRGGAGLSSCC*WCRLRL
Trigger: AAGACGCAGCCTACACCACAAGCAGCAGCTGGAGAG...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGTTGCCGCCGCGGCCCTaGTTCACGCCATCGGCCATG +
Preference number: 5 (lower is better)
Translates to: IACTGDGIARCLPETWSELPPRP*FTPSAM
Trigger: CATGGCCGATGGCGTGAACAAGGGCCGCGGCGGCAA...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGTGGAGTCGTCATCCCTaGGACGCCGGCTCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: GIARCLPETWSEDRGGAGWSRHP*DAGSAK
Trigger: TTTTGCTGAGCCGGCGTCCAAGGGATGACGACTCCA...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS TCA 90 bp AGAGCAGCTCTCGTCGTACAGGGCAGTCCTGCCGTCGTTGATGGCTaGGTTGATGGAGATGGTCCACATGCTGGAGGCGTAGCCGTCGCA +
Preference number: 5 (lower is better)
Translates to: RAALVVQGSPAVVDG*VDGDGPHAGGVAVA
Trigger: TGCGACGGCTACGCCTCCAGCATGTGGACCATCTCCATCAACTCAGCCATCAACGACGGCAGGACTGCCCTGTACGACGAGAGCTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 90 bp CCTCGGGGGCAGCTGCAGATGTCCCAGAATGCCTCAGAGTGCAGTTaGCGTACAAATCTGTGGTTGCCACACCGGCCTCGGGGTTCCTTT +
Preference number: 5 (lower is better)
Translates to: PRGQLQMSQNASECS*RTNLWLPHRPRGSF
Trigger: AAAGGAACCCCGAGGCCGGTGTGGCAACCACAGATTTGTACGGCAACTGCACTCTGAGGCATTCTGGGACATCTGCAGCTGCCCCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGAGGCTGCGTCTTCTCTaGGCCTTTGCAAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: GIARCLPETWSEDRGGAGRLRLL*AFARPL
Trigger: CAATGGCCTTGCAAAGGCCAAGAGAAGACGCAGCCT...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGGGGAATGGATGTGCATaGGGACTGGGGATGAGAAGC +
Preference number: 5 (lower is better)
Translates to: GIARCLPETWSEDRGGAGGNGCA*GLGMRS
Trigger: GCTTCTCATCCCCAGTCCCAATGCACATCCATTCCC...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS GCA 90 bp AGCCTCCAGAGCCAGTGCAAACACACCAGCTGCCTCGGGGGCAGCTaGAGATGTCCCAGAATGCCTCAGAGTGCAGTTGCCGTACAAATC +
Preference number: 5 (lower is better)
Translates to: SLQSQCKHTSCLGGS*RCPRMPQSAVAVQI
Trigger: GATTTGTACGGCAACTGCACTCTGAGGCATTCTGGGACATCTGCAGCTGCCCCCGAGGCAGCTGGTGTGTTTGCACTGGCTCTGGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCCTCTTCTGGTTGCGTaGACCGTGATGACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: VMELLGACLKRGARTEAEPLLVA*TVMTAW
Trigger: CCAGGCTGTCATCACGGTCAACGCAACCAGAAGAGG...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACCCTCTTCTGGTTGCGTaGACCGTGATGACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: ACTGDGIARCLPETWSEDPLLVA*TVMTAW
Trigger: CCAGGCTGTCATCACGGTCAACGCAACCAGAAGAGG...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTGGGGTCATGAAAGGCCACTaGTCAAAGCCCACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GIARCLPETWSEDRGGAGVMKGH*SKPTLE
Trigger: CTCCAAGGTGGGCTTTGACAAGTGGCCTTTCATGAC...CCCAGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 90 bp GTCTCGTGGGGCAGTGACTGGAAGGGGATACAGGGAGCTTCTGAGTaGTGGTCTTGCTGTCCCTTCATCTGGGAACTGGCATGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: VSWGSDWKGIQGASE*WSCCPFIWELACGC
Trigger: ACACCCACATGCCAGTTCCCAGATGAAGGGACAGCAAGACCAGCACTCAGAAGCTCCCTGTATCCCCTTCCAGTCACTGCCCCACGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 90 bp GGAAGCTATCTGCTCAAACTGTCGAACTCTGGCAACTTCTTGGAATaGGGATCCCCACGCTCTAGTGGGAAAGCCAGGCTGGCCGCCCAC +
Preference number: 5 (lower is better)
Translates to: GSYLLKLSNSGNFLE*GSPRSSGKARLAAH
Trigger: GTGGGCGGCCAGCCTGGCTTTCCCACTAGAGCGTGGGGATCCCCATTCCAAGAAGTTGCCAGAGTTCGACAGTTTGAGCAGATAGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470007.1
CDS-3UTR CAA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCCTCTCCAGCTGCTGCTaGTGGTGTAGGCTGCGTCTT +
Preference number: 5 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLLSSCC*WCRLRL
Trigger: AAGACGCAGCCTACACCACAAGCAGCAGCTGGAGAG...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGCAGTCCTGCCGTCGTaGATGGCTGAGTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: PVRVMELLGACLKRGARTAVLPS*MAELME
Trigger: CTCCATCAACTCAGCCATCAACGACGGCAGGACTGC...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACACCTCTTCTGGTTGCGTaGACCGTGATGACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PVRVMELLGACLKRGARTPLLVA*TVMTAW
Trigger: CCAGGCTGTCATCACGGTCAACGCAACCAGAAGAGG...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCTTGCATGGCCCTCTCTaGGCAGAAGAGGCTCCATAC +
Preference number: 5 (lower is better)
Translates to: TGDGIARCLPETWSEDRGLHGPL*AEEAPY
Trigger: GTATGGAGCCTCTTCTGCCAAGAGAGGGCCATGCAA...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS CCA 90 bp CATCCTTCTTTGGGAGTGAAAAGTGGTGCTAGGAGGCGCGCAGGCTaGCGGAGCAGGGGACTCGGAGGGAGGGTGCAAATAAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: HPSLGVKSGARRRAG*RSRGLGGRVQIKNS
Trigger: AGAATTCTTTATTTGCACCCTCCCTCCGAGTCCCCTGCTCCGCCAGCCTGCGCGCCTCCTAGCACCACTTTTCACTCCCAAAGAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS CCA 90 bp TCGTGGGGCAGTGACTGGAAGGGGATACAGGGAGCTTCTGAGTGCTaGTCTTGCTGTCCCTTCATCTGGGAACTGGCATGTGGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: SWGSDWKGIQGASEC*SCCPFIWELACGCV
Trigger: AACACACCCACATGCCAGTTCCCAGATGAAGGGACAGCAAGACCAGCACTCAGAAGCTCCCTGTATCCCCTTCCAGTCACTGCCCCACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS-3UTR CAA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACCGGATGCCTGCAACCTaGGAGTTGTATGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: ACTGDGIARCLPETWSEDRMPAT*ELYATP
Trigger: TGGAGTAGCATACAACTCCAAGGTTGCAGGCATCCG...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGCAGTCCTGCCGTCGTaGATGGCTGAGTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: IACTGDGIARCLPETWSEAVLPS*MAELME
Trigger: CTCCATCAACTCAGCCATCAACGACGGCAGGACTGC...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACTTCCTTTTCCTCCCGTaGCTGAAGGTGGAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: ACTGDGIARCLPETWSEDFLFLP*LKVEAK
Trigger: CTTGGCTTCCACCTTCAGCAACGGGAGGAAAAGGAA...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGTGGAGTCGTCATCCCTaGGACGCCGGCTCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: IACTGDGIARCLPETWSEWSRHP*DAGSAK
Trigger: TTTTGCTGAGCCGGCGTCCAAGGGATGACGACTCCA...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGTGGAGTCGTCATCCCTaGGACGCCGGCTCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: DGIACTGDGIARCLPETWWSRHP*DAGSAK
Trigger: TTTTGCTGAGCCGGCGTCCAAGGGATGACGACTCCA...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACTTGTCAAAGCCCACCTaGGAGTCGTCATCCCTTGGA +
Preference number: 5 (lower is better)
Translates to: ACTGDGIARCLPETWSEDLSKPT*ESSSLG
Trigger: TCCAAGGGATGACGACTCCAAGGTGGGCTTTGACAA...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGTTGTCAAAGCCCACCTaGGAGTCGTCATCCCTTGGA +
Preference number: 5 (lower is better)
Translates to: VMELLGACLKRGARTEAELSKPT*ESSSLG
Trigger: TCCAAGGGATGACGACTCCAAGGTGGGCTTTGACAA...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACTCCAGCTCCTCTTTCTaGGACATGGCCAACTTGGAC +
Preference number: 5 (lower is better)
Translates to: ACTGDGIARCLPETWSEDSSSSF*DMANLD
Trigger: GTCCAAGTTGGCCATGTCCAAGAAAGAGGAGCTGGA...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGTCCAGCTCCTCTTTCTaGGACATGGCCAACTTGGAC +
Preference number: 5 (lower is better)
Translates to: VMELLGACLKRGARTEAESSSSF*DMANLD
Trigger: GTCCAAGTTGGCCATGTCCAAGAAAGAGGAGCTGGA...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACATTGCATGGCCCTCTCTaGGCAGAAGAGGCTCCATAC +
Preference number: 5 (lower is better)
Translates to: PVRVMELLGACLKRGARTLHGPL*AEEAPY
Trigger: GTATGGAGCCTCTTCTGCCAAGAGAGGGCCATGCAA...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCCTCTGTGTTGCTGGCTaGAAGGAAAGGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLLCVAG*KERCSR
Trigger: CCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAG...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS CCA 90 bp CAAAGGGAAGCTATCTGCTCAAACTGTCGAACTCTGGCAACTTCTTaGAATGGGGATCCCCACGCTCTAGTGGGAAAGCCAGGCTGGCCG +
Preference number: 5 (lower is better)
Translates to: QREAICSNCRTLATS*NGDPHALVGKPGWP
Trigger: CGGCCAGCCTGGCTTTCCCACTAGAGCGTGGGGATCCCCATTCCAAGAAGTTGCCAGAGTTCGACAGTTTGAGCAGATAGCTTCCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470007.1
CDS-3UTR CAA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGGTGTTCTGCTGCAACTaGGCGAGCTTTGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: DGIACTGDGIARCLPETWVFCCN*ASFVLS
Trigger: GGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACAC...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGAGGCTGCGTCTTCTCTaGGCCTTTGCAAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: IACTGDGIARCLPETWSERLRLL*AFARPL
Trigger: CAATGGCCTTGCAAAGGCCAAGAGAAGACGCAGCCT...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCCTGCAACCTTGGAGTaGTATGCTACTCCAACTCCA +
Preference number: 5 (lower is better)
Translates to: VMELLGACLKRGARTEAEPATLE*YATPTP
Trigger: TGGAGTTGGAGTAGCATACAACTCCAAGGTTGCAGG...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGAGCAGTCCTGCCGTCGTaGATGGCTGAGTTGATGGAG +
Preference number: 5 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRAVLPS*MAELME
Trigger: CTCCATCAACTCAGCCATCAACGACGGCAGGACTGC...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCTTCCTTTTCCTCCCGTaGCTGAAGGTGGAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLFLFLP*LKVEAK
Trigger: CTTGGCTTCCACCTTCAGCAACGGGAGGAAAAGGAA...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTTGCCTCAGAGTGCAGTaGCCGTACAAATCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: DGIARCLPETWSEDRGGACLRVQ*PYKSVV
Trigger: AACCACAGATTTGTACGGCAACTGCACTCTGAGGCA...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 90 bp GGCAGTGACTGGAAGGGGATACAGGGAGCTTCTGAGTGCTGGTCTTaGTGTCCCTTCATCTGGGAACTGGCATGTGGGTGTGTTCCATTT +
Preference number: 5 (lower is better)
Translates to: GSDWKGIQGASECWS*CPFIWELACGCVPF
Trigger: AAATGGAACACACCCACATGCCAGTTCCCAGATGAAGGGACAGCAAGACCAGCACTCAGAAGCTCCCTGTATCCCCTTCCAGTCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS-3UTR CAA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAAGACTGAACAGGGTCTaGGAAAGCAGCGAATCAGTG +
Preference number: 5 (lower is better)
Translates to: PVRVMELLGACLKRGARTRLNRV*ESSESV
Trigger: CACTGATTCGCTGCTTTCCAAGACCCTGTTCAGTCT...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR CAA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGACCCTTCATCCTTCTTaGGGAGTGAAAAGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: VMELLGACLKRGARTEAETLHPS*GVKSGA
Trigger: AGCACCACTTTTCACTCCCAAAGAAGGATGAAGGGT...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS-3UTR CAA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGAGTGTTCTGCTGCAACTaGGCGAGCTTTGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRVFCCN*ASFVLS
Trigger: GGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACAC...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGACTCCACAGATATTGTaGTTGGCGGCAGCAGAAACT +
Preference number: 5 (lower is better)
Translates to: VMELLGACLKRGARTEAETPQIL*LAAAET
Trigger: AGTTTCTGCTGCCGCCAACAACAATATCTGTGGAGT...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTACTCCACAGATATTGTaGTTGGCGGCAGCAGAAACT +
Preference number: 5 (lower is better)
Translates to: DGIARCLPETWSEDRGGATPQIL*LAAAET
Trigger: AGTTTCTGCTGCCGCCAACAACAATATCTGTGGAGT...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTAGTGTCAGCACCAACTaGCCAGTGGATGGTATTTTC +
Preference number: 5 (lower is better)
Translates to: DGIARCLPETWSEDRGGASVSTN*PVDGIF
Trigger: GAAAATACCATCCACTGGCAAGTTGGTGCTGACACT...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGTTGTCAAAGCCCACCTaGGAGTCGTCATCCCTTGGA +
Preference number: 5 (lower is better)
Translates to: IACTGDGIARCLPETWSELSKPT*ESSSLG
Trigger: TCCAAGGGATGACGACTCCAAGGTGGGCTTTGACAA...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGGTCATGAAAGGCCACTaGTCAAAGCCCACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: DGIACTGDGIARCLPETWVMKGH*SKPTLE
Trigger: CTCCAAGGTGGGCTTTGACAAGTGGCCTTTCATGAC...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGAGGGAATGGATGTGCATaGGGACTGGGGATGAGAAGC +
Preference number: 5 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRGNGCA*GLGMRS
Trigger: GCTTCTCATCCCCAGTCCCAATGCACATCCATTCCC...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS TCA 90 bp ACCAGTCATCTGTGTACCGAGGGTAAGGATAGGGGTCGTTGCTGCTaGAGTCGTAACTTGCTTCGGCATTATAGTTGGAGGCCAGGTCCG +
Preference number: 5 (lower is better)
Translates to: TSHLCTEGKDRGRCC*SRNLLRHYSWRPGP
Trigger: CGGACCTGGCCTCCAACTATAATGCCGAAGCAAGTTACGACTTCAGCAGCAACGACCCCTATCCTTACCCTCGGTACACAGATGACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 90 bp CAACTCCACAAGAAAATGATTCGTGAAGACCGGTCGCTCAGCAGATaGAAAAACCATGACACAGAAGAGGAACCCGGCGGCCGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: QLHKKMIREDRSLSR*KNHDTEEEPGGRLP
Trigger: TGGAAGGCGGCCGCCGGGTTCCTCTTCTGTGTCATGGTTTTTGCATCTGCTGAGCGACCGGTCTTCACGAATCATTTTCTTGTGGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 90 bp ACCTTCAGCAAAGGGAAGCTTTCGGACTCCAAAGCCGTGTTCTGCTaGAACTTGGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTCCAC +
Preference number: 5 (lower is better)
Translates to: TFSKGKLSDSKAVFC*NLASFVLSPFMQLH
Trigger: GTGGAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTTCCCTTTGCTGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS GCA 90 bp CAGACCTTCAGCAAAGGGAAGCTTTCGGACTCCAAAGCCGTGTTCTaGTGCAACTTGGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTC +
Preference number: 5 (lower is better)
Translates to: QTFSKGKLSDSKAVF*CNLASFVLSPFMQL
Trigger: GAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTTCCCTTTGCTGAAGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCAGGAGTGCCATCAGCTaGCCCAGTATTGATCAGATA +
Preference number: 5 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLRSAIS*PSIDQI
Trigger: TATCTGATCAATACTGGGCAAGCTGATGGCACTCCT...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACACCACAGATATTGTTGTaGGCGGCAGCAGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: PVRVMELLGACLKRGARTPQILL*AAAETS
Trigger: AGAAGTTTCTGCTGCCGCCAACAACAATATCTGTGG...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCCCACAGATATTGTTGTaGGCGGCAGCAGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLPQILL*AAAETS
Trigger: AGAAGTTTCTGCTGCCGCCAACAACAATATCTGTGG...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGCCAACTCCACAGATATaGTTGTTGGCGGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: DGIACTGDGIARCLPETWPTPQI*LLAAAE
Trigger: TTCTGCTGCCGCCAACAACAATATCTGTGGAGTTGG...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAAGTGTCAGCACCAACTaGCCAGTGGATGGTATTTTC +
Preference number: 5 (lower is better)
Translates to: PVRVMELLGACLKRGARTSVSTN*PVDGIF
Trigger: GAAAATACCATCCACTGGCAAGTTGGTGCTGACACT...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCATGGACAATTGTTCTaGGAGTCACTCTATGTGGCT +
Preference number: 5 (lower is better)
Translates to: VMELLGACLKRGARTEAEHGQLF*ESLYVA
Trigger: AGCCACATAGAGTGACTCCAAGAACAATTGTCCATG...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACGTAACAGCCCCTTGTTaGAGACCATGGACAATTGTT +
Preference number: 5 (lower is better)
Translates to: ACTGDGIARCLPETWSEDVTAPC*RPWTIV
Trigger: AACAATTGTCCATGGTCTCAAACAAGGGGCTGTTAC...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCTACCATAACCTTCGGGTaGCATGTTAAATGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: DGIARCLPETWSEDRGGATITFG*HVKWSQ
Trigger: CTGAGACCATTTAACATGCAACCCGAAGGTTATGGT...AGCTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGGCCACCTTCAGGGAATaGAACCTAGTGCTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: ELPVRVMELLGACLKRGAATFRE*NLVLCV
Trigger: AACACAGAGCACTAGGTTCAATTCCCTGAAGGTGGC...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS GCA 90 bp CTGCAAAGCCATCTTTACCTTTCGGACTCCAAAGCCGTGTTCTGCTaGAACTTGGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTCCAC +
Preference number: 5 (lower is better)
Translates to: LQSHLYLSDSKAVFC*NLASFVLSPFMQLH
Trigger: GTGGAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGGTAAAGATGGCTTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536609.1
CDS GCA 90 bp CTGCTGCAAAGCCATCTTTACCTTTCGGACTCCAAAGCCGTGTTCTaGTGCAACTTGGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTC +
Preference number: 5 (lower is better)
Translates to: LLQSHLYLSDSKAVF*CNLASFVLSPFMQL
Trigger: GAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGGTAAAGATGGCTTTGCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536609.1
CDS CCA 90 bp GGTCTCTCTCCAGCTGCTGCTTGTGGTGTAGGCTGCGTCTTCTCTTaGCCTTTGCAAGGCCATTGTGATAAAAGTGGTACAGACCTTCAG +
Preference number: 5 (lower is better)
Translates to: GLSPAAACGVGCVFS*PLQGHCDKSGTDLQ
Trigger: CTGAAGGTCTGTACCACTTTTATCACAATGGCCTTGCAAAGGCCAAGAGAAGACGCAGCCTACACCACAAGCAGCAGCTGGAGAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000470007.1
CDS-3UTR CAA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAAGCAACTTGGCGAGCTTaGTCCTCTCCCCCTTTATGC +
Preference number: 5 (lower is better)
Translates to: KKTELPVRVMELLGACLKATWRA*SSPPLC
Trigger: GCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGC...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp CCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACATCAGCTTGCCCAGTATaGATCAGATACCACTGCTTT +
Preference number: 5 (lower is better)
Translates to: PVRVMELLGACLKRGARTSACPV*IRYHCF
Trigger: AAAGCAGTGGTATCTGATCAATACTGGGCAAGCTGA...TGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGAGGAGTGCCATCAGCTaGCCCAGTATTGATCAGATA +
Preference number: 5 (lower is better)
Translates to: IACTGDGIARCLPETWSERSAIS*PSIDQI
Trigger: TATCTGATCAATACTGGGCAAGCTGATGGCACTCCT...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGCCACAGATATTGTTGTaGGCGGCAGCAGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: ELPVRVMELLGACLKRGAPQILL*AAAETS
Trigger: AGAAGTTTCTGCTGCCGCCAACAACAATATCTGTGG...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GGTCTCAGGGACTGCTTAGTTGCCGAGAAGGTGACTGTGTGCTTTCCTCACAGACCTGCAACCTTGGAGTaGTATGCTACTCCAACTCCA +
Preference number: 5 (lower is better)
Translates to: GLRDCLVAEKVTVCFPHRPATLE*YATPTP
Trigger: TGGAGTTGGAGTAGCATACAACTCCAAGGTTGCAGG...TCTGTGAGGAAAGCACACAGTCACCTTCTCGGCAACTAAGCAGTCCCTGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGAGTGTCAGCACCAACTaGCCAGTGGATGGTATTTTC +
Preference number: 5 (lower is better)
Translates to: IACTGDGIARCLPETWSESVSTN*PVDGIF
Trigger: GAAAATACCATCCACTGGCAAGTTGGTGCTGACACT...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCGGAGCATAGGACATGGATGTaGTTGGGAACGCTATATTTG +
Preference number: 5 (lower is better)
Translates to: VMELLGACLKRGARTEAEHRTWM*LGTLYL
Trigger: CAAATATAGCGTTCCCAACAACATCCATGTCCTATG...CTCCGCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCCATGGACAATTGTTCTaGGAGTCACTCTATGTGGCT +
Preference number: 5 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLHGQLF*ESLYVA
Trigger: AGCCACATAGAGTGACTCCAAGAACAATTGTCCATG...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCACCATAACCTTCGGGTaGCATGTTAAATGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLTITFG*HVKWSQ
Trigger: CTGAGACCATTTAACATGCAACCCGAAGGTTATGGT...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp ACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACAGAGGCAAGACAAAGCATTTCTaGGGAATGGATGTGCATTGG +
Preference number: 5 (lower is better)
Translates to: TGDGIARCLPETWSEDRGKTKHF*GMDVHW
Trigger: CCAATGCACATCCATTCCCAAGAAATGCTTTGTCTT...GCCTCTGTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS CCA 90 bp GCAAAGGGAAGCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTTaGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTCCACAAGAAAA +
Preference number: 5 (lower is better)
Translates to: AKGSFRTPKPCSAAT*RALSSPPLCNSTRK
Trigger: TTTTCTTGTGGAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTTCCCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTGTGTTCTGCTGCAACTaGGCGAGCTTTGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAVFCCN*ASFVLS
Trigger: GGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACAC...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGTCAGCTTGCCCAGTATaGATCAGATACCACTGCTTT +
Preference number: 5 (lower is better)
Translates to: ELPVRVMELLGACLKRGASACPV*IRYHCF
Trigger: AAAGCAGTGGTATCTGATCAATACTGGGCAAGCTGA...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAAGGAGTGCCATCAGCTaGCCCAGTATTGATCAGATA +
Preference number: 5 (lower is better)
Translates to: TELPVRVMELLGACLKRGRSAIS*PSIDQI
Trigger: TATCTGATCAATACTGGGCAAGCTGATGGCACTCCT...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTCCAACTCCACAGATATaGTTGTTGGCGGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAPTPQI*LLAAAE
Trigger: TTCTGCTGCCGCCAACAACAATATCTGTGGAGTTGG...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp AAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGGATGCCTGCAACCTaGGAGTTGTATGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: KKTELPVRVMELLGACLKRMPAT*ELYATP
Trigger: TGGAGTAGCATACAACTCCAAGGTTGCAGGCATCCG...TTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGTTCCTTTTCCTCCCGTaGCTGAAGGTGGAAGCCAAG +
Preference number: 5 (lower is better)
Translates to: NYVKIALASSNVPLSPPMFLFLP*LKVEAK
Trigger: CTTGGCTTCCACCTTCAGCAACGGGAGGAAAAGGAA...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTTCCAGCTCCTCTTTCTaGGACATGGCCAACTTGGAC +
Preference number: 5 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLSSSSF*DMANLD
Trigger: GTCCAAGTTGGCCATGTCCAAGAAAGAGGAGCTGGA...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGATTAAGAAGACGGAATaGCCTGTACGGGTGATGGAA +
Preference number: 5 (lower is better)
Translates to: IACTGDGIARCLPETWSEIKKTE*PVRVME
Trigger: TTCCATCACCCGTACAGGCAATTCCGTCTTCTTAAT...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGGACTCAGCTTTGATTTTCTaGTTATGTAACAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: ACTGDGIARCLPETWSEDSALIF*LCNSPL
Trigger: CAAGGGGCTGTTACATAACAAGAAAATCAAAGCTGA...GTCCTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGCTCACTCAGATCAGATaGAGACACCTCAAAGTGACT +
Preference number: 5 (lower is better)
Translates to: ELPVRVMELLGACLKRGALTQIR*RHLKVT
Trigger: AGTCACTTTGAGGTGTCTCAATCTGATCTGAGTGAG...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGCTCACTCAGATCAGATaGAGACACCTCAAAGTGACT +
Preference number: 5 (lower is better)
Translates to: DGIACTGDGIARCLPETWLTQIR*RHLKVT
Trigger: AGTCACTTTGAGGTGTCTCAATCTGATCTGAGTGAG...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCCTCTGTGTTGCTGGCTaGAAGGAAAGGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LQIKKTELPVRVMELLGALCVAG*KERCSR
Trigger: CCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAG...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS CCA 90 bp GCCATCTTTACCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTTaGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTCCACAAGAAAA +
Preference number: 5 (lower is better)
Translates to: AIFTFRTPKPCSAAT*RALSSPPLCNSTRK
Trigger: TTTTCTTGTGGAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGGTAAAGATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536609.1
CDS-3UTR CAA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGAGACTGAACAGGGTCTaGGAAAGCAGCGAATCAGTG +
Preference number: 5 (lower is better)
Translates to: NYVKIALASSNVPLSPPMRLNRV*ESSESV
Trigger: CACTGATTCGCTGCTTTCCAAGACCCTGTTCAGTCT...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262545.7
CDS-3UTR CAA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGAGGATCGTTCATGTaGATGTCGATCTCATTGATG +
Preference number: 5 (lower is better)
Translates to: ELPVRVMELLGACLKRGARGSFM*MSISLM
Trigger: CATCAATGAGATCGACATCAACATGAACGATCCTCT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTCCAACTCCACAGATATaGTTGTTGGCGGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLPTPQI*LLAAAE
Trigger: TTCTGCTGCCGCCAACAACAATATCTGTGGAGTTGG...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTCGGATGCCTGCAACCTaGGAGTTGTATGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: LSWQKRLHTTGELCEDSARMPAT*ELYATP
Trigger: TGGAGTAGCATACAACTCCAAGGTTGCAGGCATCCG...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCGTCATGAAAGGCCACTaGTCAAAGCCCACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LQIKKTELPVRVMELLGAVMKGH*SKPTLE
Trigger: CTCCAAGGTGGGCTTTGACAAGTGGCCTTTCATGAC...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTAGGACATGGATGTTGTaGGGAACGCTATATTTGGGG +
Preference number: 5 (lower is better)
Translates to: GIEPSALCCWLEGKVLQARTWML*GTLYLG
Trigger: CCCCAAATATAGCGTTCCCAACAACATCCATGTCCT...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS TCA 90 bp GGATACAGGAAGCAGAGAGCAAGAGGGCAAGGGCAAAAGGCAGGGTaGGAGAGGGAGAGAGGCACAATGATTAAGAGAAATATTACTCAG +
Preference number: 5 (lower is better)
Translates to: GYRKQRARGQGQKAG*ERERGTMIKRNITQ
Trigger: CTGAGTAATATTTCTCTTAATCATTGTGCCTCTCTCCCTCTCTCACCCTGCCTTTTGCCCTTGCCCTCTTGCTCTCTGCTTCCTGTATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS-3UTR CAA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTGTCTTCTCTTGGCCTTaGCAAGGCCATTGTGATAAA +
Preference number: 5 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAVFSWP*QGHCDK
Trigger: TTTATCACAATGGCCTTGCAAAGGCCAAGAGAAGAC...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTCCTGCAACCTTGGAGTaGTATGCTACTCCAACTCCA +
Preference number: 5 (lower is better)
Translates to: LSWQKRLHTTGELCEDSAPATLE*YATPTP
Trigger: TGGAGTTGGAGTAGCATACAACTCCAAGGTTGCAGG...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTCAGAGTGCAGTaGCCGTACAAATCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: LQIKKTELPVRVMELLGACLRVQ*PYKSVV
Trigger: AACCACAGATTTGTACGGCAACTGCACTCTGAGGCA...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS-3UTR CAA 90 bp ACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGACATAGGACATGGATGTaGTTGGGAACGCTATATTTG +
Preference number: 5 (lower is better)
Translates to: TELPVRVMELLGACLKRGHRTWM*LGTLYL
Trigger: CAAATATAGCGTTCCCAACAACATCCATGTCCTATG...TCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGTCAGCTTTGATTTTCTaGTTATGTAACAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: DGIACTGDGIARCLPETWSALIF*LCNSPL
Trigger: CAAGGGGCTGTTACATAACAAGAAAATCAAAGCTGA...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp ATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGAGACCCTGTCCTCAGCTTaGATTTTCTTGTTATGTAAC +
Preference number: 5 (lower is better)
Translates to: IACTGDGIARCLPETWSETLSSA*IFLLCN
Trigger: GTTACATAACAAGAAAATCAAAGCTGAGGACAGGGT...CTCGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGAGCGACCCTGTCCTCAGCTTaGATTTTCTTGTTATGTAAC +
Preference number: 5 (lower is better)
Translates to: ELPVRVMELLGACLKRGATLSSA*IFLLCN
Trigger: GTTACATAACAAGAAAATCAAAGCTGAGGACAGGGT...CGCTCCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GCCTCAGGTTCCTCTGGGATGAATTGCATGGCCCTCTCTTGGCAGAAGAGGCTCGGAAAAGGGACATTCTaGTTTGAAAAGCTAGTAAAC +
Preference number: 5 (lower is better)
Translates to: ASGSSGMNCMALSWQKRLGKGTF*FEKLVN
Trigger: GTTTACTAGCTTTTCAAACAAGAATGTCCCTTTTCC...GAGCCTCTTCTGCCAAGAGAGGGCCATGCAATTCATCCCAGAGGAACCTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCGCCACCTTCAGGGAATaGAACCTAGTGCTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: LQIKKTELPVRVMELLGAATFRE*NLVLCV
Trigger: AACACAGAGCACTAGGTTCAATTCCCTGAAGGTGGC...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTACCCTTCATCCTTCTTaGGGAGTGAAAAGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: LSWQKRLHTTGELCEDSATLHPS*GVKSGA
Trigger: AGCACCACTTTTCACTCCCAAAGAAGGATGAAGGGT...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262545.7
CDS-3UTR CAA 90 bp AACTATGTGAAGATAGCGCTCGCATCTTCAAACGTGCCCCTTTCACCTCCCATGGTCTTCTCTTGGCCTTaGCAAGGCCATTGTGATAAA +
Preference number: 5 (lower is better)
Translates to: NYVKIALASSNVPLSPPMVFSWP*QGHCDK
Trigger: TTTATCACAATGGCCTTGCAAAGGCCAAGAGAAGAC...CATGGGAGGTGAAAGGGGCACGTTTGAAGATGCGAGCGCTATCTTCACATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTACTCCACAGATATTGTaGTTGGCGGCAGCAGAAACT +
Preference number: 5 (lower is better)
Translates to: LSWQKRLHTTGELCEDSATPQIL*LAAAET
Trigger: AGTTTCTGCTGCCGCCAACAACAATATCTGTGGAGT...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTATTAAGAAGACGGAATaGCCTGTACGGGTGATGGAA +
Preference number: 5 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLIKKTE*PVRVME
Trigger: TTCCATCACCCGTACAGGCAATTCCGTCTTCTTAAT...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp CTTCAGATTAAGAAGACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCAGGACATGGATGTTGTaGGGAACGCTATATTTGGGG +
Preference number: 5 (lower is better)
Translates to: LQIKKTELPVRVMELLGARTWML*GTLYLG
Trigger: CCCCAAATATAGCGTTCCCAACAACATCCATGTCCT...GGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTCTTCTTAATCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GACGGAATTGCCTGTACGGGTGATGGAATTGCTAGGTGCCTGCCTGAAACGTGGGGAAAAGGGACATTCTaGTTTGAAAAGCTAGTAAAC +
Preference number: 5 (lower is better)
Translates to: DGIACTGDGIARCLPETWGKGTF*FEKLVN
Trigger: GTTTACTAGCTTTTCAAACAAGAATGTCCCTTTTCC...CCACGTTTCAGGCAGGCACCTAGCAATTCCATCACCCGTACAGGCAATTCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GGAATTGAACCTAGTGCTCTGTGTTGCTGGCTTGAAGGAAAGGTGCTCCAGGCTAAGACAAAGCATTTCTaGGGAATGGATGTGCATTGG +
Preference number: 5 (lower is better)
Translates to: GIEPSALCCWLEGKVLQAKTKHF*GMDVHW
Trigger: CCAATGCACATCCATTCCCAAGAAATGCTTTGTCTT...AGCCTGGAGCACCTTTCCTTCAAGCCAGCAACACAGAGCACTAGGTTCAATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp GAATGGATGTGCATTGGGACTGGGGATGAGAAGCAATCTCTGGGTAGGTCACTTAGAGGATCGTTCATGTaGATGTCGATCTCATTGATG +
Preference number: 5 (lower is better)
Translates to: EWMCIGTGDEKQSLGRSLRGSFM*MSISLM
Trigger: CATCAATGAGATCGACATCAACATGAACGATCCTCT...AAGTGACCTACCCAGAGATTGCTTCTCATCCCCAGTCCCAATGCACATCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS CCA 90 bp CCCAGACCAAGTAAATCAGAATCTCTGGGAGTGAGACCCAGGCATTaGAAACTGTTAAAACTTCTCAGACCATTCCAACAGACAGCCAAT +
Preference number: 5 (lower is better)
Translates to: PRPSKSESLGVRPRH*KLLKLLRPFQQTAN
Trigger: ATTGGCTGTCTGTTGGAATGGTCTGAGAAGTTTTAACAGTTTCCAATGCCTGGGTCTCACTCCCAGAGATTCTGATTTACTTGGTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS-3UTR CAA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTTCAGCTTGCCCAGTATaGATCAGATACCACTGCTTT +
Preference number: 5 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLSACPV*IRYHCF
Trigger: AAAGCAGTGGTATCTGATCAATACTGGGCAAGCTGA...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS TCA 90 bp GGGATGGGGAGGGATAGCATTAGGAGAAATACCTCATGTAAAGGATaGGTTAATGGGTGCAGCAAACCAACATGGCACATGTATACATAC +
Preference number: 5 (lower is better)
Translates to: GMGRDSIRRNTSCKG*VNGCSKPTWHMYTY
Trigger: GTATGTATACATGTGCCATGTTGGTTTGCTGCACCCATTAACTCATCCTTTACATGAGGTATTTCTCCTAATGCTATCCCTCCCCATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS-3UTR CAA 90 bp CTCTCTTGGCAGAAGAGGCTCCATACAACTGGAGAACTATGTGAAGATAGCGCTCTTCCATTATATTACTaGGAAATCAAAGCCCACATC +
Preference number: 5 (lower is better)
Translates to: LSWQKRLHTTGELCEDSALPLYY*EIKAHI
Trigger: GATGTGGGCTTTGATTTCCAAGTAATATAATGGAAG...AGCGCTATCTTCACATAGTTCTCCAGTTGTATGGAGCCTCTTCTGCCAAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS-3UTR CAA 90 bp TTGGGATTGACCATAACCTTCGGGTTGCATGTTAAATGGTCTCAGGGACTGCTTCTTCCATTATATTACTaGGAAATCAAAGCCCACATC +
Preference number: 5 (lower is better)
Translates to: LGLTITFGLHVKWSQGLLLPLYY*EIKAHI
Trigger: GATGTGGGCTTTGATTTCCAAGTAATATAATGGAAG...AAGCAGTCCCTGAGACCATTTAACATGCAACCCGAAGGTTATGGTCAATCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS TCA 90 bp ATATTACTCAGGACACAGACCTCTTGTAAGATTTTGGAATCTCTGTaGACTCTCAAATTCAAGGGAGGGTGTCCATGCACCATTCAAAAC +
Preference number: 5 (lower is better)
Translates to: ILLRTQTSCKILESL*TLKFKGGCPCTIQN
Trigger: GTTTTGAATGGTGCATGGACACCCTCCCTTGAATTTGAGAGTTCACAGAGATTCCAAAATCTTACAAGAGGTCTGTGTCCTGAGTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS GCA 90 bp ATTTATTACTCACCGAGGATTCTGGTCAAAAAGTTGGCAAAACCTTaGACTACAGTTCTCTTCAGAAGTCAAACAATTCAAAGGACCAGG +
Preference number: 5 (lower is better)
Translates to: IYYSPRILVKKLAKP*TTVLFRSQTIQRTR
Trigger: CCTGGTCCTTTGAATTGTTTGACTTCTGAAGAGAACTGTAGTGCAAGGTTTTGCCAACTTTTTGACCAGAATCCTCGGTGAGTAATAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS GCA 72 bp CGCCGTCCCCGGAGGCCCACACGTAGATGCTGCCTTTaGCGCCGCGGCCCTTGTTCACGCCATCGGCCATGG +
Preference number: 6 (lower is better)
Translates to: RRPRRPTRRCCL*RRGPCSRHRPW
Trigger: CCATGGCCGATGGCGTGAACAAGGGCCGCGGCGGCAAAGGCAGCATCTACGTGTGGGCCTCCGGGGACGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 72 bp AGCTGCCGCCGTCCCCGGAGGCCCACACGTAGATGCTaGCTTTGCCGCCGCGGCCCTTGTTCACGCCATCGG +
Preference number: 6 (lower is better)
Translates to: SCRRPRRPTRRC*LCRRGPCSRHR
Trigger: CCGATGGCGTGAACAAGGGCCGCGGCGGCAAAGGCAGCATCTACGTGTGGGCCTCCGGGGACGGCGGCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS TCA 72 bp CCCAGCAGGAGACCCGGCTCGCCCCACCCGCGATGGTaGCTGGAGGAGGCTCCTCTAGGAGTCCTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: PSRRPGSPHPRW*LEEAPLGVLAA
Trigger: TGCAGCCAGGACTCCTAGAGGAGCCTCCTCCAGTCACCATCGCGGGTGGGGCGAGCCGGGTCTCCTGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS CCA 72 bp TTTTGTAGGCTCCAGGCAGGTCCGGAGCGAAGCGGCTaGGAAGCCCAGCAGGAGACCCGGCTCGCCCCACCC +
Preference number: 6 (lower is better)
Translates to: FCRLQAGPERSG*EAQQETRLAPP
Trigger: GGGTGGGGCGAGCCGGGTCTCCTGCTGGGCTTCCCAGCCGCTTCGCTCCGGACCTGCCTGGAGCCTACAAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS GCA 72 bp GGGTCCACTCCTTCAGCACCCCCTTCTGCGGGGCGCTaGCGACAAATCCCAGCTCCAGGGTCCAGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: GSTPSAPPSAGR*RQIPAPGSRCL
Trigger: GAGGCACCTGGACCCTGGAGCTGGGATTTGTCGGCAGCGCCCCGCAGAAGGGGGTGCTGAAGGAGTGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000459871.1
ENST00000536609.1
CDS GCA 72 bp TGGAGGCGTAGCCGTCGCAGTTGCAGTCGTCATAGCTaGCGCCGTCCCCGGAGGCCCACACGTAGATGCTGC +
Preference number: 6 (lower is better)
Translates to: WRRSRRSCSRHS*RRPRRPTRRCC
Trigger: GCAGCATCTACGTGTGGGCCTCCGGGGACGGCGGCAGCTATGACGACTGCAACTGCGACGGCTACGCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 72 bp AGATGGTCCACATGCTGGAGGCGTAGCCGTCGCAGTTaGAGTCGTCATAGCTGCCGCCGTCCCCGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: RWSTCWRRSRRS*SRHSCRRPRRP
Trigger: GGGCCTCCGGGGACGGCGGCAGCTATGACGACTGCAACTGCGACGGCTACGCCTCCAGCATGTGGACCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 72 bp CAGGAGAGACGCGGCCGGGGTGGACACGGCGGGAGGTaGATTCTCAGACCTGGGGACGTTCCACTGCACAAG +
Preference number: 6 (lower is better)
Translates to: QERRGRGGHGGR*ILRPGDVPLHK
Trigger: CTTGTGCAGTGGAACGTCCCCAGGTCTGAGAATGCACCTCCCGCCGTGTCCACCCCGGCCGCGTCTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS CCA 72 bp CCGGGGTGGACACGGCGGGAGGTGCATTCTCAGACCTaGGGACGTTCCACTGCACAAGGACAGCGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: PGWTRREVHSQT*GRSTAQGQRGC
Trigger: GCACCCTCGCTGTCCTTGTGCAGTGGAACGTCCCCAGGTCTGAGAATGCACCTCCCGCCGTGTCCACCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS GCA 72 bp CCGCCAGGTCAGACCCAGGTTAGCCTCCAGAGCCAGTaGAAACACACCAGCTGCCTCGGGGGCAGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: PPGQTQVSLQSQ*KHTSCLGGSCR
Trigger: TCTGCAGCTGCCCCCGAGGCAGCTGGTGTGTTTGCACTGGCTCTGGAGGCTAACCTGGGTCTGACCTGGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS CCA 72 bp CTCCAAGATCTGCCTTCAGGAGAGACGCGGCCGGGGTaGACACGGCGGGAGGTGCATTCTCAGACCTGGGGA +
Preference number: 6 (lower is better)
Translates to: LQDLPSGETRPG*TRREVHSQTWG
Trigger: TCCCCAGGTCTGAGAATGCACCTCCCGCCGTGTCCACCCCGGCCGCGTCTCTCCTGAAGGCAGATCTTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS GCA 72 bp CCCGCACCACCTGGTCGATGTACGGGGCACTCTGAGTaGCATGCAGCATCAGGGTCCACTCCTTCAGCACCC +
Preference number: 6 (lower is better)
Translates to: PAPPGRCTGHSE*HAASGSTPSAP
Trigger: GGGTGCTGAAGGAGTGGACCCTGATGCTGCATGGCACTCAGAGTGCCCCGTACATCGACCAGGTGGTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000459871.1
ENST00000536609.1
CDS CAA 90 bp GGCGGCCGCCTTCCACTGGGAGACACAACCACCCTTCATCCTTCTTaGGGAGTGAAAAGTGGTGCTAGGAGGCGCGCAGGCTGGCGGAGC +
Preference number: 6 (lower is better)
Translates to: GGRLPLGDTTTLHPS*GVKSGARRRAGWRS
Trigger: GCTCCGCCAGCCTGCGCGCCTCCTAGCACCACTTTTCACTCCCAAAGAAGGATGAAGGGTGGTTGTGTCTCCCAGTGGAAGGCGGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS CCA 72 bp ACCCGGCGGCCGCCTTCCACTTCTAGGGGTGATCCATaGGGGGCGAGAGTGCAAGGACGAGCCCTTGTTTTT +
Preference number: 6 (lower is better)
Translates to: TRRPPSTSRGDP*GARVQGRALVF
Trigger: AAAAACAAGGGCTCGTCCTTGCACTCTCGCCCCCCATGGATCACCCCTAGAAGTGGAAGGCGGCCGCCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377899.5
CDS CCA 72 bp AATGGGGATCCCCACGCTCTAGTGGGAAAGCCAGGCTaGCCGCCCACGCATCAGGAGAGGACACCTCGACTT +
Preference number: 6 (lower is better)
Translates to: NGDPHALVGKPG*PPTHQERTPRL
Trigger: AAGTCGAGGTGTCCTCTCCTGATGCGTGGGCGGCCAGCCTGGCTTTCCCACTAGAGCGTGGGGATCCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470007.1
CDS CAA 90 bp GCCTCGGGGGCAGCTGCAGATGTCCCAGAATGCCTCAGAGTGCAGTaGCCGTACAAATCTGTGGTTGCCACACCGGCCTCGGGGTTCCTT +
Preference number: 6 (lower is better)
Translates to: ASGAAADVPECLRVQ*PYKSVVATPASGFL
Trigger: AAGGAACCCCGAGGCCGGTGTGGCAACCACAGATTTGTACGGCAACTGCACTCTGAGGCATTCTGGGACATCTGCAGCTGCCCCCGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 72 bp AGCTGGTTCCGTTTGGAGGTGAGCACAGTCAGATGCTaGATGTCCCGCCAGGTCAGACCCAGGTTAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SWFRLEVSTVRC*MSRQVRPRLAS
Trigger: GGAGGCTAACCTGGGTCTGACCTGGCGGGACATGCAGCATCTGACTGTGCTCACCTCCAAACGGAACCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS CCA 72 bp TCAGATGCTGCATGTCCCGCCAGGTCAGACCCAGGCTaGATACAGGAAGCAGAGAGCAAGAGGGCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: SDAACPARSDPG*IQEAESKRARA
Trigger: TGCCCTTGCCCTCTTGCTCTCTGCTTCCTGTATCCAGCCTGGGTCTGACCTGGCGGGACATGCAGCATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CAA 90 bp AAATCTGTGGTTGCCACACCGGCCTCGGGGTTCCTTTTCCTCCCGTaGCTGAAGGTGGAAGCCAAGGTGGAAGAGCAGCTCTCGTCGTAC +
Preference number: 6 (lower is better)
Translates to: KSVVATPASGFLFLP*LKVEAKVEEQLSSY
Trigger: GTACGACGAGAGCTGCTCTTCCACCTTGGCTTCCACCTTCAGCAACGGGAGGAAAAGGAACCCCGAGGCCGGTGTGGCAACCACAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS TCA 72 bp TGGGAGACACAACCACCCTTCATCCTTCTTTGGGAGTaGAAAGTGGTGCTAGGAGGCGCGCAGGCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: WETQPPFILLWE*KVVLGGAQAGG
Trigger: TCCGCCAGCCTGCGCGCCTCCTAGCACCACTTTTCACTCCCAAAGAAGGATGAAGGGTGGTTGTGTCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000536609.1
CDS GCA 72 bp CAGCTGCAGATGTCCCAGAATGCCTCAGAGTGCAGTTaGCGTACAAATCTGTGGTTGCCACACCGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: QLQMSQNASECS*RTNLWLPHRPR
Trigger: CCGAGGCCGGTGTGGCAACCACAGATTTGTACGGCAACTGCACTCTGAGGCATTCTGGGACATCTGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 72 bp AGCTGGTTCCGTTTGGAGGTGAGCACAGTCAGATGCTaGATGTCCCGCCAGGTCAGACCCAGGCTGGATACA +
Preference number: 6 (lower is better)
Translates to: SWFRLEVSTVRC*MSRQVRPRLDT
Trigger: TGTATCCAGCCTGGGTCTGACCTGGCGGGACATGCAGCATCTGACTGTGCTCACCTCCAAACGGAACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CAA 72 bp GCAGCTGCAGATGTCCCAGAATGCCTCAGAGTGCAGTaGCCGTACAAATCTGTGGTTGCCACACCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: AAADVPECLRVQ*PYKSVVATPAS
Trigger: CGAGGCCGGTGTGGCAACCACAGATTTGTACGGCAACTGCACTCTGAGGCATTCTGGGACATCTGCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS CAA 72 bp GCCACTTGTCAAAGCCCACCTTGGAGTCGTCATCCCTaGGACGCCGGCTCAGCAAAATGGACTTGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: ATCQSPPWSRHP*DAGSAKWTWCP
Trigger: TGGGCACCAAGTCCATTTTGCTGAGCCGGCGTCCAAGGGATGACGACTCCAAGGTGGGCTTTGACAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000459871.1
ENST00000536609.1
CDS GCA 72 bp TGCAAAGCCATCTTTACCCTGGGGTCTCTCTCCAGCTaGTGCTTGTGGTGTAGGCTGCGTCTTCTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: CKAIFTLGSLSS*CLWCRLRLLLA
Trigger: GGCCAAGAGAAGACGCAGCCTACACCACAAGCAGCAGCTGGAGAGAGACCCCAGGGTAAAGATGGCTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000470007.1
CDS GCA 72 bp GGCAGTGACTGGAAGGGGATACAGGGAGCTTCTGAGTaGTGGTCTTGCTGTCCCTTCATCTGGGAACTGGCA +
Preference number: 6 (lower is better)
Translates to: GSDWKGIQGASE*WSCCPFIWELA
Trigger: TGCCAGTTCCCAGATGAAGGGACAGCAAGACCAGCACTCAGAAGCTCCCTGTATCCCCTTCCAGTCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 72 bp CCACTTGTCAAAGCCCACCTTGGAGTCGTCATCCCTTaGACGCCGGCTCAGCAAAATGGACTTGGTGCCCAT +
Preference number: 6 (lower is better)
Translates to: PLVKAHLGVVIP*TPAQQNGLGAH
Trigger: ATGGGCACCAAGTCCATTTTGCTGAGCCGGCGTCCAAGGGATGACGACTCCAAGGTGGGCTTTGACAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000459871.1
ENST00000536609.1
CDS CAA 72 bp CCCTCACAGGCGTCGGTTGTGAGTGTCAGCACCAACTaGCCAGTGGATGGTATTTTCTCAGGGTCCTGCACG +
Preference number: 6 (lower is better)
Translates to: PSQASVVSVSTN*PVDGIFSGSCT
Trigger: CGTGCAGGACCCTGAGAAAATACCATCCACTGGCAAGTTGGTGCTGACACTCACAACCGACGCCTGTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000459871.1
ENST00000536609.1
CDS CAA 90 bp GCAAAGGGAAGCTATCTGCTCAAACTGTCGAACTCTGGCAACTTCTaGGAATGGGGATCCCCACGCTCTAGTGGGAAAGCCAGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: AKGSYLLKLSNSGNF*EWGSPRSSGKARLA
Trigger: GGCCAGCCTGGCTTTCCCACTAGAGCGTGGGGATCCCCATTCCAAGAAGTTGCCAGAGTTCGACAGTTTGAGCAGATAGCTTCCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470007.1
CDS GCA 72 bp TGGAAGGGGATACAGGGAGCTTCTGAGTGCTGGTCTTaGTGTCCCTTCATCTGGGAACTGGCATGTGGGTGT +
Preference number: 6 (lower is better)
Translates to: WKGIQGASECWS*CPFIWELACGC
Trigger: ACACCCACATGCCAGTTCCCAGATGAAGGGACAGCAAGACCAGCACTCAGAAGCTCCCTGTATCCCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 72 bp ATGGAGGAGGCCTCGATGATGTCTGTCATGAATGGCTaGTCCAGCATCCGGATGCCTGCAACCTTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: MEEASMMSVMNG*SSIRMPATLEL
Trigger: CAACTCCAAGGTTGCAGGCATCCGGATGCTGGACCAGCCATTCATGACAGACATCATCGAGGCCTCCTCCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS CCA 72 bp CTGCTCAAACTGTCGAACTCTGGCAACTTCTTGGAATaGGGATCCCCACGCTCTAGTGGGAAAGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LLKLSNSGNFLE*GSPRSSGKARL
Trigger: CAGCCTGGCTTTCCCACTAGAGCGTGGGGATCCCCATTCCAAGAAGTTGCCAGAGTTCGACAGTTTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470007.1
CDS GCA 72 bp AGCAAAGGGAAGCTTTCGGACTCCAAAGCCGTGTTCTaGTGCAACTTGGCGAGCTTTGTCCTCTCCCCCTTT +
Preference number: 6 (lower is better)
Translates to: SKGKLSDSKAVF*CNLASFVLSPF
Trigger: AAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTTCCCTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS GCA 72 bp GTAAGGATAGGGGTCGTTGCTGCTGAAGTCGTAACTTaGTTCGGCATTATAGTTGGAGGCCAGGTCCGGGTG +
Preference number: 6 (lower is better)
Translates to: VRIGVVAAEVVT*FGIIVGGQVRV
Trigger: CACCCGGACCTGGCCTCCAACTATAATGCCGAAGCAAGTTACGACTTCAGCAGCAACGACCCCTATCCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000470007.1
ENST00000536609.1
CDS CCA 72 bp AGCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTTaGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTCC +
Preference number: 6 (lower is better)
Translates to: SFRTPKPCSAAT*RALSSPPLCNS
Trigger: GGAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS CCA 72 bp AGTGACTGGAAGGGGATACAGGGAGCTTCTGAGTGCTaGTCTTGCTGTCCCTTCATCTGGGAACTGGCATGT +
Preference number: 6 (lower is better)
Translates to: SDWKGIQGASEC*SCCPFIWELAC
Trigger: ACATGCCAGTTCCCAGATGAAGGGACAGCAAGACCAGCACTCAGAAGCTCCCTGTATCCCCTTCCAGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 72 bp ACCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTTaGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTCC +
Preference number: 6 (lower is better)
Translates to: TFRTPKPCSAAT*RALSSPPLCNS
Trigger: GGAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536609.1
CDS GCA 72 bp AAAGGGAAGCTTTCGGACTCCAAAGCCGTGTTCTGCTaGAACTTGGCGAGCTTTGTCCTCTCCCCCTTTATG +
Preference number: 6 (lower is better)
Translates to: KGKLSDSKAVFC*NLASFVLSPFM
Trigger: CATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTTCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS GCA 72 bp GTCCAGCATCCGGATGCCTGCAACCTTGGAGTTGTATaGTACTCCAACTCCACAGATATTGTTGTTGGCGGC +
Preference number: 6 (lower is better)
Translates to: VQHPDACNLGVV*YSNSTDIVVGG
Trigger: GCCGCCAACAACAATATCTGTGGAGTTGGAGTAGCATACAACTCCAAGGTTGCAGGCATCCGGATGCTGGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 72 bp AGCCATCTTTACCTTTCGGACTCCAAAGCCGTGTTCTaGTGCAACTTGGCGAGCTTTGTCCTCTCCCCCTTT +
Preference number: 6 (lower is better)
Translates to: SHLYLSDSKAVF*CNLASFVLSPF
Trigger: AAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGGTAAAGATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536609.1
CDS CCA 72 bp GCTATCTGCTCAAACTGTCGAACTCTGGCAACTTCTTaGAATGGGGATCCCCACGCTCTAGTGGGAAAGCCA +
Preference number: 6 (lower is better)
Translates to: AICSNCRTLATS*NGDPHALVGKP
Trigger: TGGCTTTCCCACTAGAGCGTGGGGATCCCCATTCCAAGAAGTTGCCAGAGTTCGACAGTTTGAGCAGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470007.1
CDS CAA 72 bp AAGCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTaGGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTC +
Preference number: 6 (lower is better)
Translates to: KLSDSKAVFCCN*ASFVLSPFMQL
Trigger: GAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS CAA 72 bp AGCTATCTGCTCAAACTGTCGAACTCTGGCAACTTCTaGGAATGGGGATCCCCACGCTCTAGTGGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: SYLLKLSNSGNF*EWGSPRSSGKA
Trigger: GGCTTTCCCACTAGAGCGTGGGGATCCCCATTCCAAGAAGTTGCCAGAGTTCGACAGTTTGAGCAGATAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470007.1
CDS CAA 72 bp TACCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTaGGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTC +
Preference number: 6 (lower is better)
Translates to: YLSDSKAVFCCN*ASFVLSPFMQL
Trigger: GAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536609.1
CDS CAA 90 bp AGCAAAGGGAAGCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTaGGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTCCACAAGAAA +
Preference number: 6 (lower is better)
Translates to: SKGKLSDSKAVFCCN*ASFVLSPFMQLHKK
Trigger: TTTCTTGTGGAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTTCCCTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262545.7
ENST00000377899.5
CDS CAA 90 bp TCTCCAGCTGCTGCTTGTGGTGTAGGCTGCGTCTTCTCTTGGCCTTaGCAAGGCCATTGTGATAAAAGTGGTACAGACCTTCAGCAAAGG +
Preference number: 6 (lower is better)
Translates to: SPAAACGVGCVFSWP*QGHCDKSGTDLQQR
Trigger: CCTTTGCTGAAGGTCTGTACCACTTTTATCACAATGGCCTTGCAAAGGCCAAGAGAAGACGCAGCCTACACCACAAGCAGCAGCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000470007.1
CDS TCA 72 bp CTGTGTACCGAGGGTAAGGATAGGGGTCGTTGCTGCTaGAGTCGTAACTTGCTTCGGCATTATAGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: LCTEGKDRGRCC*SRNLLRHYSWR
Trigger: CCTCCAACTATAATGCCGAAGCAAGTTACGACTTCAGCAGCAACGACCCCTATCCTTACCCTCGGTACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS GCA 72 bp CATCTTTACCTTTCGGACTCCAAAGCCGTGTTCTGCTaGAACTTGGCGAGCTTTGTCCTCTCCCCCTTTATG +
Preference number: 6 (lower is better)
Translates to: HLYLSDSKAVFC*NLASFVLSPFM
Trigger: CATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGGTAAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536609.1
CDS CCA 72 bp CCAGCTGCTGCTTGTGGTGTAGGCTGCGTCTTCTCTTaGCCTTTGCAAGGCCATTGTGATAAAAGTGGTACA +
Preference number: 6 (lower is better)
Translates to: PAAACGVGCVFS*PLQGHCDKSGT
Trigger: TGTACCACTTTTATCACAATGGCCTTGCAAAGGCCAAGAGAAGACGCAGCCTACACCACAAGCAGCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000470007.1
CDS CAA 90 bp AGCCATCTTTACCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTaGGCGAGCTTTGTCCTCTCCCCCTTTATGCAACTCCACAAGAAA +
Preference number: 6 (lower is better)
Translates to: SHLYLSDSKAVFCCN*ASFVLSPFMQLHKK
Trigger: TTTCTTGTGGAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGGTAAAGATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536609.1
CDS TCA 72 bp GGGCCAGGTTATCGCACAGGTTGTTGGGACTGCCCATaGAAATTTTCTCCTAGGGGCATTGAAGATCTCATG +
Preference number: 6 (lower is better)
Translates to: GPGYRTGCWDCP*KFSPRGIEDLM
Trigger: CATGAGATCTTCAATGCCCCTAGGAGAAAATTTTCATGGGCAGTCCCAACAACCTGTGCGATAACCTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 72 bp CTGGTCTTGCTGTCCCTTCATCTGGGAACTGGCATGTaGGTGTGTTCCATTTTTGAAAAGGAGGGTACCAGT +
Preference number: 6 (lower is better)
Translates to: LVLLSLHLGTGM*VCSIFEKEGTS
Trigger: ACTGGTACCCTCCTTTTCAAAAATGGAACACACCCACATGCCAGTTCCCAGATGAAGGGACAGCAAGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CAA 72 bp ACTCCAAAGCCGTGTTCTGCTGCAACTTGGCGAGCTTaGTCCTCTCCCCCTTTATGCAACTCCACAAGAAAA +
Preference number: 6 (lower is better)
Translates to: TPKPCSAATWRA*SSPPLCNSTRK
Trigger: TTTTCTTGTGGAGTTGCATAAAGGGGGAGAGGACAAAGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS CAA 72 bp GCTGCTTGTGGTGTAGGCTGCGTCTTCTCTTGGCCTTaGCAAGGCCATTGTGATAAAAGTGGTACAGACCTT +
Preference number: 6 (lower is better)
Translates to: AACGVGCVFSWP*QGHCDKSGTDL
Trigger: AAGGTCTGTACCACTTTTATCACAATGGCCTTGCAAAGGCCAAGAGAAGACGCAGCCTACACCACAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000470007.1
CDS TCA 72 bp TTGTCCTCTCCCCCTTTATGCAACTCCACAAGAAAATaGTTCGTGAAGACCGGTCGCTCAGCAGATGCAAAA +
Preference number: 6 (lower is better)
Translates to: LSSPPLCNSTRK*FVKTGRSADAK
Trigger: TTTTGCATCTGCTGAGCGACCGGTCTTCACGAATCATTTTCTTGTGGAGTTGCATAAAGGGGGAGAGGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS CAA 72 bp ACCTTGGAGTTGTATGCTACTCCAACTCCACAGATATaGTTGTTGGCGGCAGCAGAAACTTCTCCTGCACAT +
Preference number: 6 (lower is better)
Translates to: TLELYATPTPQI*LLAAAETSPAH
Trigger: ATGTGCAGGAGAAGTTTCTGCTGCCGCCAACAACAATATCTGTGGAGTTGGAGTAGCATACAACTCCAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000536609.1
CDS TCA 72 bp AGGACACAGACCTCTTGTAAGATTTTGGAATCTCTGTaGACTCTCAAATTCAAGGGAGGGTGTCCATGCACC +
Preference number: 6 (lower is better)
Translates to: RTQTSCKILESL*TLKFKGGCPCT
Trigger: GGTGCATGGACACCCTCCCTTGAATTTGAGAGTTCACAGAGATTCCAAAATCTTACAAGAGGTCTGTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CAA 72 bp AGCCACATTCAAATCAAGGCCAGGAGTGCCATCAGCTaGCCCAGTATTGATCAGATACCACTGCTTTGTAAA +
Preference number: 6 (lower is better)
Translates to: SHIQIKARSAIS*PSIDQIPLLCK
Trigger: TTTACAAAGCAGTGGTATCTGATCAATACTGGGCAAGCTGATGGCACTCCTGGCCTTGATTTGAATGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262545.7
ENST00000377899.5
ENST00000470007.1
ENST00000536609.1
CDS TCA 72 bp AGGGATAGCATTAGGAGAAATACCTCATGTAAAGGATaGGTTAATGGGTGCAGCAAACCAACATGGCACATG +
Preference number: 6 (lower is better)
Translates to: RDSIRRNTSCKG*VNGCSKPTWHM
Trigger: CATGTGCCATGTTGGTTTGCTGCACCCATTAACTCATCCTTTACATGAGGTATTTCTCCTAATGCTATCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 72 bp AGTAAATCAGAATCTCTGGGAGTGAGACCCAGGCATTaGAAACTGTTAAAACTTCTCAGACCATTCCAACAG +
Preference number: 6 (lower is better)
Translates to: SKSESLGVRPRH*KLLKLLRPFQQ
Trigger: CTGTTGGAATGGTCTGAGAAGTTTTAACAGTTTCCAATGCCTGGGTCTCACTCCCAGAGATTCTGATTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CAA 72 bp GTGTTGAAGATGTGGAGCAACTGGAACACATGTACTTaGTGGATGAGCGTGCAAGTAATTCCAACTAAACTG +
Preference number: 6 (lower is better)
Translates to: VLKMWSNWNTCT*WMSVQVIPTKL
Trigger: CAGTTTAGTTGGAATTACTTGCACGCTCATCCACAAAGTACATGTGTTCCAGTTGCTCCACATCTTCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CAA 72 bp CTCACCGAGGATTCTGGTCAAAAAGTTGGCAAAACCTaGCACTACAGTTCTCTTCAGAAGTCAAACAATTCA +
Preference number: 6 (lower is better)
Translates to: LTEDSGQKVGKT*HYSSLQKSNNS
Trigger: TGAATTGTTTGACTTCTGAAGAGAACTGTAGTGCAAGGTTTTGCCAACTTTTTGACCAGAATCCTCGGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CAA 72 bp GTCTATGTTTTTCAAATTGCAAATCATGATTTGTTTTaGGGCCAGGTTATCGCACAGGTTGTTGGGACTGCC +
Preference number: 6 (lower is better)
Translates to: VYVFQIANHDLF*GQVIAQVVGTA
Trigger: GGCAGTCCCAACAACCTGTGCGATAACCTGGCCCAAAAACAAATCATGATTTGCAATTTGAAAAACATAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS GCA 72 bp TCACCGAGGATTCTGGTCAAAAAGTTGGCAAAACCTTaGACTACAGTTCTCTTCAGAAGTCAAACAATTCAA +
Preference number: 6 (lower is better)
Translates to: SPRILVKKLAKP*TTVLFRSQTIQ
Trigger: TTGAATTGTTTGACTTCTGAAGAGAACTGTAGTGCAAGGTTTTGCCAACTTTTTGACCAGAATCCTCGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CAA 90 bp AATTTATTACTCACCGAGGATTCTGGTCAAAAAGTTGGCAAAACCTaGCACTACAGTTCTCTTCAGAAGTCAAACAATTCAAAGGACCAG +
Preference number: 6 (lower is better)
Translates to: NLLLTEDSGQKVGKT*HYSSLQKSNNSKDQ
Trigger: CTGGTCCTTTGAATTGTTTGACTTCTGAAGAGAACTGTAGTGCAAGGTTTTGCCAACTTTTTGACCAGAATCCTCGGTGAGTAATAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 72 bp AAATTTATTACTCACCGAGGATTCTGGTCAAAAAGTTaGCAAAACCTTGCACTACAGTTCTCTTCAGAAGTC +
Preference number: 6 (lower is better)
Translates to: KFITHRGFWSKS*QNLALQFSSEV
Trigger: GACTTCTGAAGAGAACTGTAGTGCAAGGTTTTGCCAACTTTTTGACCAGAATCCTCGGTGAGTAATAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 72 bp TCTGAACAACATGGAAAAATCTCACAAATACCATGTTaGCCTAAAGAAGCCAGGCAGAAAAGAGACCATAAA +
Preference number: 6 (lower is better)
Translates to: SEQHGKISQIPC*PKEARQKRDHK
Trigger: TTTATGGTCTCTTTTCTGCCTGGCTTCTTTAGGCCAACATGGTATTTGTGAGATTTTTCCATGTTGTTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 72 bp TGTTTGGCTGTATCTTCTAAAGTTAAGCTTAAGCTATaGCCTGGAAATTCTTTTCCTAGGCATATACCTGAC +
Preference number: 6 (lower is better)
Translates to: CLAVSSKVKLKL*PGNSFPRHIPD
Trigger: GTCAGGTATATGCCTAGGAAAAGAATTTCCAGGCCATAGCTTAAGCTTAACTTTAGAAGATACAGCCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS CCA 72 bp AAATATTACTCAGGACACAGACCTCTTGTAAGATTTTaGAATCTCTGTGAACTCTCAAATTCAAGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: KYYSGHRPLVRF*NLCELSNSREG
Trigger: ACCCTCCCTTGAATTTGAGAGTTCACAGAGATTCCAAAATCTTACAAGAGGTCTGTGTCCTGAGTAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS TCA 72 bp TATACAGCAGTGAGAATGAATGAACTCCAGGTACTCTaGACAACATGGAAAAATCTCACAAATACCATGTTG +
Preference number: 6 (lower is better)
Translates to: YTAVRMNELQVL*TTWKNLTNTML
Trigger: CAACATGGTATTTGTGAGATTTTTCCATGTTGTTCAGAGTACCTGGAGTTCATTCATTCTCACTGCTGTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000459871.1
CDS TCA 72 bp AAGTCTATTCTAACACACACACCGGAATGGCTAAAATaGAAAAGACTGACAATGTTAAGTGTTGAAGATGTG +
Preference number: 6 (lower is better)
Translates to: KSILTHTPEWLK*KRLTMLSVEDV
Trigger: CACATCTTCAACACTTAACATTGTCAGTCTTTTTCATTTTAGCCATTCCGGTGTGTGTGTTAGAATAGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459871.1