Pregenerated sensors for PCSK1N (Homo sapiens)
Ensembl gene IDs: ENSG00000102109Ensembl transcript IDs: ENST00000218230.6, ENST00000611033.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGATCCTCGGGTGAGAGGGCTGGCTGGCCGGGGTAAGTTGCTCTaGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCGGGGG | + |
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Preference number: 1 (lower is better) Translates to: RDPRVRGLAGRGKLL*TCWRGAVLVAGWRG Trigger: CCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCAGCCCTCTCACCCGAGGATCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| 3UTR CCA 90 bp | AAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATaGCGGGGGCACTTCTGGGTCCCAGGGTGCACGGGATCCGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: KLLWTCWRGAVLVAG*RGHFWVPGCTGSGQ Trigger: CTGCCCGGATCCCGTGCACCCTGGGACCCAGAAGTGCCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTAGGGATCCTCGGGTGAGAGGGCTGGCTGGCCGGGGTAAGTTGCTCTGGGTCCTGGTGGCGGGATaGCGGGGGCACTTCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: GGRDPRVRGLAGRGKLLWVLVAG*RGHFWV Trigger: GACCCAGAAGTGCCCCCGCCATCCCGCCACCAGGAC...CCAGAGCAACTTACCCCGGCCAGCCAGCCCTCTCACCCGAGGATCCCTACCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| 3UTR-3UTR CCA 90 bp | CAGATCATGTTTATTGTGGGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGTGGCGGGGGCACTTCTaGGTCCCAGGGTGCACGGGA | + |
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Preference number: 2 (lower is better) Translates to: QIMFIVGPGGRDPRVRGLWRGHF*VPGCTG Trigger: TCCCGTGCACCCTGGGACCCAGAAGTGCCCCCGCCA...CAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCCCACAATAAACATGATCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| 3UTR-3UTR GCA 90 bp | ATCATGTTTATTGTGGGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGGCTAAGTTGCTCTGGACGTaGTGGCGGGGAGCAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: IMFIVGPGGRDPRVRGLAKLLWT*WRGAVL Trigger: CAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTT...AGCCAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCCCACAATAAACATGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| 3UTR CCA 72 bp | GGGCTGGCTGGCCGGGGTAAGTTGCTCTGGACGTGCTaGCGGGGAGCAGTCCTGGTGGCGGGATGGCGGGGG | + |
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Preference number: 3 (lower is better) Translates to: GLAGRGKLLWTC*RGAVLVAGWRG Trigger: CCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCAGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| 3UTR GCA 72 bp | AGAGGGCTGGCTGGCCGGGGTAAGTTGCTCTGGACGTaGTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCGG | + |
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Preference number: 3 (lower is better) Translates to: RGLAGRGKLLWT*WRGAVLVAGWR Trigger: CCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCAGCCCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| 3UTR CCA 72 bp | CGGGTGAGAGGGCTGGCTGGCCGGGGTAAGTTGCTCTaGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGA | + |
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Preference number: 3 (lower is better) Translates to: RVRGLAGRGKLL*TCWRGAVLVAG Trigger: TCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCAGCCCTCTCACCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| 3UTR CCA 72 bp | AGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTaGCGGGATGGCGGGGGCACTTCTGGGTCCCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: SCSGRAGGEQSW*RDGGGTSGSQG Trigger: ACCCTGGGACCCAGAAGTGCCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | GTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCGGGGGCAGCGAGCGAGCTGCGCTaGAGGCGCGTCGGGGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: VALDVLAGSSPGGGMAGAASELR*RRVGVV Trigger: GACGACCCCGACGCGCCTGCAGCGCAGCTCGCTCGC...TGCCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR TCA 90 bp | AAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCGGGGGCTCACCTCGGGGCACTaGCCGCCGGAAGCGGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: KLLWTCWRGAVLVAGWRGLTSGH*PPEAAR Trigger: CCTCGCCGCTTCCGGCGGTCAGTGCCCCGAGGTGAG...CCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | AAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCGGGGGCGGCGTGCAGGCACCTaGGGCGCCGGGGTCTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: KLLWTCWRGAVLVAGWRGRRAGT*GAGVSR Trigger: CCTAGAGACCCCGGCGCCCCAGGTGCCTGCACGCCG...CCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | CTGGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGACGGGCGGACTGGCTaGCAAGTGCGCAGTGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LAGVSCSGRAGGEQSWWRDGRTG*QVRSAG Trigger: CCCGGCACTGCGCACTTGCCAGCCAGTCCGCCCGTC...CCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | CTGGCTGGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGGCGCGGGGACAAGCTaGGCTGCTAGGGCGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LAGRGKLLWTCWRGAVLVGAGTS*AARAAG Trigger: CCCTGCCGCCCTAGCAGCCCAGCTTGTCCCCGCGCC...CACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | GCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCGGGGGCACTTGTCCTGGTGGCGGGATaGCGGGGGCACTTCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ALDVLAGSSPGGGMAGALVLVAG*RGHFWV Trigger: GACCCAGAAGTGCCCCCGCCATCCCGCCACCAGGAC...AAGTGCCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGGCTGGCCGGGGTAAGTTGGGGGAGCAGTCCTGGTaGCGGGATGGCGGGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: GPGGRDPRVRGLAGRGKLGEQSW*RDGGGT Trigger: AGTGCCCCCGCCATCCCGCCACCAGGACTGCTCCCC...CAACTTACCCCGGCCAGCCAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | GGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCCTGGCAAGTGCGCAGTaGCGGGGCGAGCTGGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: GVSCSGRAGGEQSWWRDGLASAQ*RGELAR Trigger: CCTCGCCAGCTCGCCCCGGCACTGCGCACTTGCCAG...GCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | GATCCTCGGGTGAGAGGGCTGGCTGGCCGGGGTAAGTTGCTCTGGACGTGCTGGTCGGCCTCCAGCAGATaGGCCAGCGCCCGCGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: DPRVRGLAGRGKLLWTCWSASSR*ASARAS Trigger: GCTGGCGCGGGCGCTGGCGCATCTGCTGGAGGCCGA...CCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCAGCCCTCTCACCCGAGGATC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | GGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGAGGGTGTCTCGTCGCCTaGCTCCTCAGCATCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GRGKLLWTCWRGAVLVAGGCLVA*LLSIRA Trigger: GGCCCGGATGCTGAGGAGGCAGGCGACGAGACACCC...TCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGGCTGGCCGGGGTAAGTTGTCCGGACGGGCGGACTaGCTGGCAAGTGCGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GPGGRDPRVRGLAGRGKLSGRAD*LASAQC Trigger: GCACTGCGCACTTGCCAGCCAGTCCGCCCGTCCGGA...CAACTTACCCCGGCCAGCCAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | GAGGGCTGGCTGGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTCAGAGCCCACATCGTaGTCGGCGGCACGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: EGWLAGVSCSGRAGGEQSSEPTS*SAARRR Trigger: CCTCCGCCGTGCCGCCGACCACGATGTGGGCTCTGA...GGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCAGCCCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGGCTGGCCGGGGTAAGTTGGGGCAGTGCTCAGGGTaGCAAGAGGCGGCGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPGGRDPRVRGLAGRGKLGQCSG*QEAACR Trigger: CCTGCACGCCGCCTCTTGCCACCCTGAGCACTGCCC...CAACTTACCCCGGCCAGCCAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | GGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCGGACTGGCTGGCAAGTaGGCAGTGCCGGGGCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GVSCSGRAGGEQSWWRDGGLAGK*AVPGRA Trigger: AGCTCGCCCCGGCACTGCGCACTTGCCAGCCAGTCC...GCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | TCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCGGGGGCACTTCTTTCTGGGTCCCAGGGTaGACGGGATCCGGGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SGRAGGEQSWWRDGGGTSFWVPG*TGSGQC Trigger: GCACTGCCCGGATCCCGTGCACCCTGGGACCCAGAA...AGAAGTGCCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | TGGCTGGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGTGGCGGGGGCACTTCTaGGTCCCAGGGTGCACGGGA | + |
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Preference number: 4 (lower is better) Translates to: WLAGVSCSGRAGGEQSWWWRGHF*VPGCTG Trigger: TCCCGTGCACCCTGGGACCCAGAAGTGCCCCCGCCA...CCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | TGGCTGGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGACGGGATCCGGGCAGTaGTCAGGGTGGCAAGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: WLAGVSCSGRAGGEQSWWTGSGQ*SGWQEA Trigger: CGCCTCTTGCCACCCTGAGCACTGCCCGGATCCCGT...CCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | GGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGACGGGGTAAGTTGCTCTaGACGTGCTGGCGGGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GRGKLLWTCWRGAVLVAGRGKLL*TCWRGA Trigger: TGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCG...TCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| 3UTR CAA 72 bp | GATCCTCGGGTGAGAGGGCTGGCTGGCCGGGGTAAGTaGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: DPRVRGLAGRGK*LWTCWRGAVLV Trigger: CACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCAGCCCTCTCACCCGAGGATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | CTGGCTGGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGTTGCTCTGGACGTGCTaGCGGGGAGCAGTCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LAGRGKLLWTCWRGAVLVLLWTC*RGAVLV Trigger: CACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAA...CACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | CAGATCATGTTTATTGTGGGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGCAGACGCGCAGCAGCTaGGCCAGGACGCGCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QIMFIVGPGGRDPRVRGLQTRSS*ARTRAC Trigger: GCAGGCGCGCGTCCTGGCGCAGCTGCTGCGCGTCTG...CAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCCCACAATAAACATGATCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | ATCATGTTTATTGTGGGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGGCTAGAGCGCGAGCGAGCTaGGCTGCAGGCGCGTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: IMFIVGPGGRDPRVRGLARARAS*AAGASG Trigger: CCCCGACGCGCCTGCAGCGCAGCTCGCTCGCGCTCT...AGCCAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCCCACAATAAACATGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | ATCATGTTTATTGTGGGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGGCTTGGCAAGAGGCGGCGTaGAGGCACCTGGGGCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: IMFIVGPGGRDPRVRGLAWQEAA*RHLGRR Trigger: CCGGCGCCCCAGGTGCCTGCACGCCGCCTCTTGCCA...AGCCAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCCCACAATAAACATGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR TCA 90 bp | ATCATGTTTATTGTGGGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGGCTGTAGGGATCCTCGGGTaGGAGGGCTGGCTGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: IMFIVGPGGRDPRVRGLAVGILG*EGWLAG Trigger: CCCGGCCAGCCAGCCCTCTCACCCGAGGATCCCTAC...AGCCAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCCCACAATAAACATGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR GCA 90 bp | ATGTTTATTGTGGGGCCAGGGGGTAGGGATCCTCGGGTGAGAGGGCTGGCTGGCCTGGCCGGGGTAAGTTaGTCTGGACGTGCTGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: MFIVGPGGRDPRVRGLAGLAGVS*SGRAGG Trigger: CCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAG...GCCAGCCAGCCCTCTCACCCGAGGATCCCTACCCCCTGGCCCCACAATAAACAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CCA 90 bp | GGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGAAGATCATGTTTATTGTaGGGCCAGGGGGTAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: GRGKLLWTCWRGAVLVAGRSCLL*GQGVGI Trigger: GATCCCTACCCCCTGGCCCCACAATAAACATGATCT...TCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS GCA 90 bp | AGGGCGGCAGGGTCAAGGCGGGCGCGGAGCAGAGCGCGAGCGAGCTaGGCTGCAGGCGCGTCGGGGTCGTCGTCCAGGCCCAGAGCCGGA | + |
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Preference number: 5 (lower is better) Translates to: RAAGSRRARSRARAS*AAGASGSSSRPRAG Trigger: TCCGGCTCTGGGCCTGGACGACGACCCCGACGCGCCTGCAGCGCAGCTCGCTCGCGCTCTGCTCCGCGCCCGCCTTGACCCTGCCGCCCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS GCA 90 bp | GGCAGGGTCAAGGCGGGCGCGGAGCAGAGCGCGAGCGAGCTGCGCTaGAGGCGCGTCGGGGTCGTCGTCCAGGCCCAGAGCCGGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: GRVKAGAEQSASELR*RRVGVVVQAQSRIR Trigger: TCTGATCCGGCTCTGGGCCTGGACGACGACCCCGACGCGCCTGCAGCGCAGCTCGCTCGCGCTCTGCTCCGCGCCCGCCTTGACCCTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS GCA 90 bp | TGGCGGGGGCACTTCTGGGTCCCAGGGTGCACGGGATCCGGGCAGTaGTCAGGGTGGCAAGAGGCGGCGTGCAGGCACCTGGGGCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: WRGHFWVPGCTGSGQ*SGWQEAACRHLGRR Trigger: CCGGCGCCCCAGGTGCCTGCACGCCGCCTCTTGCCACCCTGAGCACTGCCCGGATCCCGTGCACCCTGGGACCCAGAAGTGCCCCCGCCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CAA 90 bp | TGGCTGGCCGGGGTAAGTTGCTCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGGCTGGCCGGGGTAAGTaGCTCTGGACGTGCTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: WLAGVSCSGRAGGEQSWWAGRGK*LWTCWR Trigger: CCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGC...CCACCAGGACTGCTCCCCGCCAGCACGTCCAGAGCAACTTACCCCGGCCAGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS-3UTR CAA 90 bp | TCTGGACGTGCTGGCGGGGAGCAGTCCTGGTGGCGGGATGGCGGGGGCACTTCTTTCAGATCATGTTTATaGTGGGGCCAGGGGGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: SGRAGGEQSWWRDGGGTSFRSCL*WGQGVG Trigger: CCCTACCCCCTGGCCCCACAATAAACATGATCTGAA...AGAAGTGCCCCCGCCATCCCGCCACCAGGACTGCTCCCCGCCAGCACGTCCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS GCA 90 bp | TTAGGCCGCGGGGCTCCTGCACACGTTCACATCCGCAGCTGCTCCTaGAGTTACAATCGCCAAGCCACCCAGGTGCAAGGACATGCACCA | + |
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Preference number: 5 (lower is better) Translates to: LGRGAPAHVHIRSCS*SYNRQATQVQGHAP Trigger: TGGTGCATGTCCTTGCACCTGGGTGGCTTGGCGATTGTAACTGCAGGAGCAGCTGCGGATGTGAACGTGTGCAGGAGCCCCGCGGCCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS GCA 90 bp | CTGCTCCTGCAGTTACAATCGCCAAGCCACCCAGGTGCAAGGACATaGACCATCCTTAAAGACACAATGCAGCAGAGAGACATCATGGCT | + |
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Preference number: 5 (lower is better) Translates to: LLLQLQSPSHPGART*TILKDTMQQRDIMA Trigger: AGCCATGATGTCTCTCTGCTGCATTGTGTCTTTAAGGATGGTGCATGTCCTTGCACCTGGGTGGCTTGGCGATTGTAACTGCAGGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS TCA 90 bp | AAGACACAATGCAGCAGAGAGACATCATGGCTCCTCTCCTCAGGATaGCACAGCTCCACAAAGAAACGGAGAGAAACAGTCTCAGGAACA | + |
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Preference number: 5 (lower is better) Translates to: KTQCSRETSWLLSSG*HSSTKKRRETVSGT Trigger: TGTTCCTGAGACTGTTTCTCTCCGTTTCTTTGTGGAGCTGTGTCATCCTGAGGAGAGGAGCCATGATGTCTCTCTGCTGCATTGTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS GCA 90 bp | AGGCACTTGGTCCAACAGAACCACTATGGAATGTGCACACGGAGATaGGAAGACCATTCCCTCTCAAACACAAACGAAATCACACACACA | + |
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Preference number: 5 (lower is better) Translates to: RHLVQQNHYGMCTRR*EDHSLSNTNEITHT Trigger: TGTGTGTGTGATTTCGTTTGTGTTTGAGAGGGAATGGTCTTCGCATCTCCGTGTGCACATTCCATAGTGGTTCTGTTGGACCAAGTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS GCA 90 bp | AAACGAAATCCCAGGCACTTGGTCCAACAGAACCACTATGGAATGTaGACACGGAGATGCGAAGACCATTCCCTCTCAAACACAAACGAA | + |
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Preference number: 5 (lower is better) Translates to: KRNPRHLVQQNHYGM*TRRCEDHSLSNTNE Trigger: TTCGTTTGTGTTTGAGAGGGAATGGTCTTCGCATCTCCGTGTGCACATTCCATAGTGGTTCTGTTGGACCAAGTGCCTGGGATTTCGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS CCA 72 bp | GCCCCAGCGAGCCGGGCTCCGGACGGGCGGACTGGCTaGCAAGTGCGCAGTGCCGGGGCGAGCTGGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: APASRAPDGRTG*QVRSAGASWRG Trigger: GCCTCGCCAGCTCGCCCCGGCACTGCGCACTTGCCAGCCAGTCCGCCCGTCCGGAGCCCGGCTCGCTGGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS GCA 72 bp | GCCTCCAGCAGATGCGCCAGCGCCCGCGCCAGCTCCTaGACCGCCCCCGCCGCCTCACCTCGGGGCACTGAC | + |
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Preference number: 6 (lower is better) Translates to: ASSRCASARASS*TAPAASPRGTD Trigger: GTCAGTGCCCCGAGGTGAGGCGGCGGGGGCGGTGCAGGAGCTGGCGCGGGCGCTGGCGCATCTGCTGGAGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS GCA 72 bp | GGGTCAAGGCGGGCGCGGAGCAGAGCGCGAGCGAGCTaGGCTGCAGGCGCGTCGGGGTCGTCGTCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GSRRARSRARAS*AAGASGSSSRP Trigger: GGGCCTGGACGACGACCCCGACGCGCCTGCAGCGCAGCTCGCTCGCGCTCTGCTCCGCGCCCGCCTTGACCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS CCA 72 bp | GTCCCAGGGTGCACGGGATCCGGGCAGTGCTCAGGGTaGCAAGAGGCGGCGTGCAGGCACCTGGGGCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: VPGCTGSGQCSG*QEAACRHLGRR Trigger: CCGGCGCCCCAGGTGCCTGCACGCCGCCTCTTGCCACCCTGAGCACTGCCCGGATCCCGTGCACCCTGGGAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS GCA 72 bp | GTGGCGGGATGGCGGGGGCACTTCTGGGTCCCAGGGTaGACGGGATCCGGGCAGTGCTCAGGGTGGCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: VAGWRGHFWVPG*TGSGQCSGWQE Trigger: CTCTTGCCACCCTGAGCACTGCCCGGATCCCGTGCACCCTGGGACCCAGAAGTGCCCCCGCCATCCCGCCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS CCA 72 bp | GGAGCAGTCCTGGTGGCGGGATGGCGGGGGCACTTCTaGGTCCCAGGGTGCACGGGATCCGGGCAGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GAVLVAGWRGHF*VPGCTGSGQCS Trigger: TGAGCACTGCCCGGATCCCGTGCACCCTGGGACCCAGAAGTGCCCCCGCCATCCCGCCACCAGGACTGCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS GCA 72 bp | CACTTCTGGGTCCCAGGGTGCACGGGATCCGGGCAGTaGTCAGGGTGGCAAGAGGCGGCGTGCAGGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: HFWVPGCTGSGQ*SGWQEAACRHL Trigger: CAGGTGCCTGCACGCCGCCTCTTGCCACCCTGAGCACTGCCCGGATCCCGTGCACCCTGGGACCCAGAAGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS CCA 72 bp | AGTGCTCAGGGTGGCAAGAGGCGGCGTGCAGGCACCTaGGGCGCCGGGGTCTCTAGGCGTTTCACACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SAQGGKRRRAGT*GAGVSRRFTRS Trigger: GCTGCGTGTGAAACGCCTAGAGACCCCGGCGCCCCAGGTGCCTGCACGCCGCCTCTTGCCACCCTGAGCACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218230.6 |
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| CDS GCA 72 bp | GGCCGCGGGGCTCCTGCACACGTTCACATCCGCAGCTaGTCCTGCAGTTACAATCGCCAAGCCACCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GRGAPAHVHIRS*SCSYNRQATQV Trigger: CACCTGGGTGGCTTGGCGATTGTAACTGCAGGAGCAGCTGCGGATGTGAACGTGTGCAGGAGCCCCGCGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS GCA 72 bp | GGGGCTCCTGCACACGTTCACATCCGCAGCTGCTCCTaGAGTTACAATCGCCAAGCCACCCAGGTGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GAPAHVHIRSCS*SYNRQATQVQG Trigger: TCCTTGCACCTGGGTGGCTTGGCGATTGTAACTGCAGGAGCAGCTGCGGATGTGAACGTGTGCAGGAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS GCA 72 bp | CCCAGGCACTTGGTCCAACAGAACCACTATGGAATGTaGACACGGAGATGCGAAGACCATTCCCTCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PRHLVQQNHYGM*TRRCEDHSLSN Trigger: GTTTGAGAGGGAATGGTCTTCGCATCTCCGTGTGCACATTCCATAGTGGTTCTGTTGGACCAAGTGCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS CAA 90 bp | CGGAGAGAAACAGTCTCAGGAACACGCAAACGAAATCCCAGGCACTaGGTCCAACAGAACCACTATGGAATGTGCACACGGAGATGCGAA | + |
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Preference number: 6 (lower is better) Translates to: RRETVSGTRKRNPRH*VQQNHYGMCTRRCE Trigger: TTCGCATCTCCGTGTGCACATTCCATAGTGGTTCTGTTGGACCAAGTGCCTGGGATTTCGTTTGCGTGTTCCTGAGACTGTTTCTCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS CCA 72 bp | ACGAAATCCCAGGCACTTGGTCCAACAGAACCACTATaGAATGTGCACACGGAGATGCGAAGACCATTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TKSQALGPTEPL*NVHTEMRRPFP Trigger: AGGGAATGGTCTTCGCATCTCCGTGTGCACATTCCATAGTGGTTCTGTTGGACCAAGTGCCTGGGATTTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS CCA 72 bp | CAGTCTCAGGAACACGCAAACGAAATCCCAGGCACTTaGTCCAACAGAACCACTATGGAATGTGCACACGGA | + |
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Preference number: 6 (lower is better) Translates to: QSQEHANEIPGT*SNRTTMECAHG Trigger: TCCGTGTGCACATTCCATAGTGGTTCTGTTGGACCAAGTGCCTGGGATTTCGTTTGCGTGTTCCTGAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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| CDS GCA 72 bp | GTCCAACAGAACCACTATGGAATGTGCACACGGAGATaGGAAGACCATTCCCTCTCAAACACAAACGAAATC | + |
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Preference number: 6 (lower is better) Translates to: VQQNHYGMCTRR*EDHSLSNTNEI Trigger: GATTTCGTTTGTGTTTGAGAGGGAATGGTCTTCGCATCTCCGTGTGCACATTCCATAGTGGTTCTGTTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611033.1 |
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