Pregenerated sensors for PCSEAT (Homo sapiens)
Ensembl gene IDs: ENSG00000286027Ensembl transcript IDs: ENST00000650670.1, ENST00000651009.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGCCCTGGCTCAGCATCTCCCGGAGGCCACGTCTGCTCCTCCAGTaGTCTCCTGGGCAGCGCCAGCAGAAGGCCAGGCACTCCTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: QPWLSISRRPRLLLQ*SPGQRQQKARHSSD Trigger: GTCTGAGGAGTGCCTGGCCTTCTGCTGGCGCTGCCCAGGAGAGCACTGGAGGAGCAGACGTGGCCTCCGGGAGATGCTGAGCCAGGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 90 bp | GTCCCCCTGGTGTGGGAGGAGGGTCTGCAGTCAGTCCGCTCAGTGTaGCGAGCCTGCGCGGTCCTCCCAGAGGCCCTTGCCCTTGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: VPLVWEEGLQSVRSV*RACAVLPEALALVF Trigger: GAACACAAGGGCAAGGGCCTCTGGGAGGACCGCGCAGGCTCGGCACACTGAGCGGACTGACTGCAGACCCTCCTCCCACACCAGGGGGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 90 bp | GTCCTGGGCGGCGGGCGGGGTGTGGAGGAAGCAGCCGCACTTTCCTaGTTCCGGGGCAGACGTCACCCAGCCTGCACATCCCTCCTGATT | + |
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Preference number: 5 (lower is better) Translates to: VLGGGRGVEEAAALS*FRGRRHPACTSLLI Trigger: AATCAGGAGGGATGTGCAGGCTGGGTGACGTCTGCCCCGGAACCAGGAAAGTGCGGCTGCTTCCTCCACACCCCGCCCGCCGCCCAGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS GCA 90 bp | TCTCATGTCCTCAGCCCTGGCTCAGCATCTCCCGGAGGCCACGTCTaGTCCTCCAGTGCTCTCCTGGGCAGCGCCAGCAGAAGGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SHVLSPGSASPGGHV*SSSALLGSASRRPG Trigger: GCCTGGCCTTCTGCTGGCGCTGCCCAGGAGAGCACTGGAGGAGCAGACGTGGCCTCCGGGAGATGCTGAGCCAGGGCTGAGGACATGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 90 bp | TGGTGGGAGTGTCTGCCCTCCCTGCGCATCTCATGTCCTCAGCCCTaGCTCAGCATCTCCCGGAGGCCACGTCTGCTCCTCCAGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: WWECLPSLRISCPQP*LSISRRPRLLLQCS Trigger: AGAGCACTGGAGGAGCAGACGTGGCCTCCGGGAGATGCTGAGCCAGGGCTGAGGACATGAGATGCGCAGGGAGGGCAGACACTCCCACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 90 bp | GCTTGCTTGCTTCCCTCTGGTGGCCGAGTGCTAACCCAGCCCTCCTaGCCTCGGGCCTTCACCACCCTGTTTTGTGGCTGCCCACCCTGT | + |
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Preference number: 5 (lower is better) Translates to: ACLLPSGGRVLTQPS*PRAFTTLFCGCPPC Trigger: ACAGGGTGGGCAGCCACAAAACAGGGTGGTGAAGGCCCGAGGCCAGGAGGGCTGGGTTAGCACTCGGCCACCAGAGGGAAGCAAGCAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 90 bp | AGAGGCCCTTGCCCTTGTGTTCCAGGCCCCACCTCACTTCCCCACTaGCACACCTGGCGCCTTCCGTTCAGACTCGCTGGCTGTCTAACC | + |
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Preference number: 5 (lower is better) Translates to: RGPCPCVPGPTSLPH*HTWRLPFRLAGCLT Trigger: GGTTAGACAGCCAGCGAGTCTGAACGGAAGGCGCCAGGTGTGGCAGTGGGGAAGTGAGGTGGGGCCTGGAACACAAGGGCAAGGGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 90 bp | GACAGAGAGAAAGAGAGAGAGGGAGGGAGCTTGCTTGCTTCCCTCTaGTGGCCGAGTGCTAACCCAGCCCTCCTGGCCTCGGGCCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: DREKEREGGSLLASL*WPSANPALLASGLH Trigger: GTGAAGGCCCGAGGCCAGGAGGGCTGGGTTAGCACTCGGCCACCAGAGGGAAGCAAGCAAGCTCCCTCCCTCTCTCTCTTTCTCTCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 90 bp | GAAGCAGCCGCACTTTCCTGGTTCCGGGGCAGACGTCACCCAGCCTaGACATCCCTCCTGATTCATCTGGGAGGCCAGTGCTTTTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: EAAALSWFRGRRHPA*TSLLIHLGGQCFWV Trigger: GACCCAAAAGCACTGGCCTCCCAGATGAATCAGGAGGGATGTGCAGGCTGGGTGACGTCTGCCCCGGAACCAGGAAAGTGCGGCTGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS TCA 90 bp | TTTCCTGGTTCCGGGGCAGACGTCACCCAGCCTGCACATCCCTCCTaGTTCATCTGGGAGGCCAGTGCTTTTGGGTCTGTCTGCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: FPGSGADVTQPAHPS*FIWEASAFGSVCSI Trigger: GATGGAGCAGACAGACCCAAAAGCACTGGCCTCCCAGATGAATCAGGAGGGATGTGCAGGCTGGGTGACGTCTGCCCCGGAACCAGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS GCA 90 bp | CGTCACCCAGCCTGCACATCCCTCCTGATTCATCTGGGAGGCCAGTaGTTTTGGGTCTGTCTGCTCCATCCTTCCTGCACTTCACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: RHPACTSLLIHLGGQ*FWVCLLHPSCTSQE Trigger: CTCCTGTGAAGTGCAGGAAGGATGGAGCAGACAGACCCAAAAGCACTGGCCTCCCAGATGAATCAGGAGGGATGTGCAGGCTGGGTGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CCA 90 bp | CCAGCCTGCACATCCCTCCTGATTCATCTGGGAGGCCAGTGCTTTTaGGTCTGTCTGCTCCATCCTTCCTGCACTTCACAGGAGGCAACC | + |
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Preference number: 5 (lower is better) Translates to: PACTSLLIHLGGQCF*VCLLHPSCTSQEAT Trigger: GGTTGCCTCCTGTGAAGTGCAGGAAGGATGGAGCAGACAGACCCAAAAGCACTGGCCTCCCAGATGAATCAGGAGGGATGTGCAGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CCA 90 bp | CTCACTTCCCCACTGCCACACCTGGCGCCTTCCGTTCAGACTCGCTaGCTGTCTAACCCTAGTCCATGGGAAAACCCAACAATCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LTSPLPHLAPSVQTR*LSNPSPWENPTILR Trigger: CCTGAGGATTGTTGGGTTTTCCCATGGACTAGGGTTAGACAGCCAGCGAGTCTGAACGGAAGGCGCCAGGTGTGGCAGTGGGGAAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 90 bp | TCACCACCCTGTTTTGTGGCTGCCCACCCTGTCTCATCCAGCCCCTaGGCTGAGGTCCCTTATAGACTCGGGCGTCATTTGCTGATGATT | + |
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Preference number: 5 (lower is better) Translates to: SPPCFVAAHPVSSSP*AEVPYRLGRHLLMI Trigger: AATCATCAGCAAATGACGCCCGAGTCTATAAGGGACCTCAGCGCAGGGGCTGGATGAGACAGGGTGGGCAGCCACAAAACAGGGTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 90 bp | CTGGCGCCTTCCGTTCAGACTCGCTGGCTGTCTAACCCTAGTCCATaGGAAAACCCAACAATCCTCAGGAGGTGTGGGTGGAGAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: LAPSVQTRWLSNPSP*ENPTILRRCGWRER Trigger: TCTCTCTCTCCACCCACACCTCCTGAGGATTGTTGGGTTTTCCCATGGACTAGGGTTAGACAGCCAGCGAGTCTGAACGGAAGGCGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 90 bp | CTAGCCTGTGCTCATGTAATAAGGAGTCACATGGCCTCACAGGGTTaGGGCAGTGGCCCAGCCATGCCATCAGGGGACAATTGCTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LACAHVIRSHMASQG*GSGPAMPSGDNCSF Trigger: AAAAGAGCAATTGTCCCCTGATGGCATGGCTGGGCCACTGCCCCAACCCTGTGAGGCCATGTGACTCCTTATTACATGAGCACAGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 90 bp | CAATCAGAAGGCTTCTTCCTGTGGACTCTCACATCCGTCCCTCTCTaGATCCCTCCTGCCCTGCCAAATCCAAGCTTGTCACCTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: QSEGFFLWTLTSVPL*IPPALPNPSLSPLS Trigger: TGAAAGAGGTGACAAGCTTGGATTTGGCAGGGCAGGAGGGATGCAGAGAGGGACGGATGTGAGAGTCCACAGGAAGAAGCCTTCTGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 90 bp | TCTCCAAGCATTCACCTGCAGATAGCACAAACCCCGACTAGCCTGTaGTCATGTAATAAGGAGTCACATGGCCTCACAGGGTTGGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SPSIHLQIAQTPTSL*SCNKESHGLTGLGQ Trigger: CTGCCCCAACCCTGTGAGGCCATGTGACTCCTTATTACATGAGCACAGGCTAGTCGGGGTTTGTGCTATCTGCAGGTGAATGCTTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 90 bp | GATGTTGGCCTTCATTCCTCAGGTCATTGCTTCACAATCACAAAATaGCCGCTGCAGCTCCAGGCATTGCTTCTGTGCTTCAAGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: DVGLHSSGHCFTITK*PLQLQALLLCFKEE Trigger: TTCCTCCTTGAAGCACAGAAGCAATGCCTGGAGCTGCAGCGGCCATTTTGTGATTGTGAAGCAATGACCTGAGGAATGAAGGCCAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 90 bp | CTCTGTTTTGCCATCCTTGATGTTGGCCTTCATTCCTCAGGTCATTaGTTCACAATCACAAAATGGCCGCTGCAGCTCCAGGCATTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LCFAILDVGLHSSGH*FTITKWPLQLQALL Trigger: AAGCAATGCCTGGAGCTGCAGCGGCCATTTTGTGATTGTGAAGCAATGACCTGAGGAATGAAGGCCAACATCAAGGATGGCAAAACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS TCA 90 bp | TGCGTAGGGTGTAGGGAGGCTCCACCTGAGAACAGAAAGCCTGGGTaGCTCTTCTTAGAGCGTGATGTGCTTTCATATAAAATAAGTCTA | + |
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Preference number: 5 (lower is better) Translates to: CVGCREAPPENRKPG*LFLERDVLSYKISL Trigger: TAGACTTATTTTATATGAAAGCACATCACGCTCTAAGAAGAGTCACCCAGGCTTTCTGTTCTCAGGTGGAGCCTCCCTACACCCTACGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 72 bp | GTGTGGGAGGAGGGTCTGCAGTCAGTCCGCTCAGTGTaGCGAGCCTGCGCGGTCCTCCCAGAGGCCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: VWEEGLQSVRSV*RACAVLPEALA Trigger: GGCAAGGGCCTCTGGGAGGACCGCGCAGGCTCGGCACACTGAGCGGACTGACTGCAGACCCTCCTCCCACAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 72 bp | GGCGGGCGGGGTGTGGAGGAAGCAGCCGCACTTTCCTaGTTCCGGGGCAGACGTCACCCAGCCTGCACATCC | + |
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Preference number: 6 (lower is better) Translates to: GGRGVEEAAALS*FRGRRHPACTS Trigger: GGATGTGCAGGCTGGGTGACGTCTGCCCCGGAACCAGGAAAGTGCGGCTGCTTCCTCCACACCCCGCCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS GCA 72 bp | AGTGTGCCGAGCCTGCGCGGTCCTCCCAGAGGCCCTTaGCCTTGTGTTCCAGGCCCCACCTCACTTCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SVPSLRGPPRGP*PCVPGPTSLPH Trigger: GTGGGGAAGTGAGGTGGGGCCTGGAACACAAGGGCAAGGGCCTCTGGGAGGACCGCGCAGGCTCGGCACACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CAA 72 bp | CAGTGTGCCGAGCCTGCGCGGTCCTCCCAGAGGCCCTaGCCCTTGTGTTCCAGGCCCCACCTCACTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: QCAEPARSSQRP*PLCSRPHLTSP Trigger: TGGGGAAGTGAGGTGGGGCCTGGAACACAAGGGCAAGGGCCTCTGGGAGGACCGCGCAGGCTCGGCACACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 72 bp | CTTCCCTCTGGTGGCCGAGTGCTAACCCAGCCCTCCTaGCCTCGGGCCTTCACCACCCTGTTTTGTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LPSGGRVLTQPS*PRAFTTLFCGC Trigger: GCAGCCACAAAACAGGGTGGTGAAGGCCCGAGGCCAGGAGGGCTGGGTTAGCACTCGGCCACCAGAGGGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 72 bp | GCACTTTCCTGGTTCCGGGGCAGACGTCACCCAGCCTaGACATCCCTCCTGATTCATCTGGGAGGCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: ALSWFRGRRHPA*TSLLIHLGGQC Trigger: GCACTGGCCTCCCAGATGAATCAGGAGGGATGTGCAGGCTGGGTGACGTCTGCCCCGGAACCAGGAAAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS TCA 72 bp | TCCGGGGCAGACGTCACCCAGCCTGCACATCCCTCCTaGTTCATCTGGGAGGCCAGTGCTTTTGGGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SGADVTQPAHPS*FIWEASAFGSV Trigger: GACAGACCCAAAAGCACTGGCCTCCCAGATGAATCAGGAGGGATGTGCAGGCTGGGTGACGTCTGCCCCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CAA 90 bp | CCCAGCCTGCACATCCCTCCTGATTCATCTGGGAGGCCAGTGCTTTaGGGTCTGTCTGCTCCATCCTTCCTGCACTTCACAGGAGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: PSLHIPPDSSGRPVL*GLSAPSFLHFTGGN Trigger: GTTGCCTCCTGTGAAGTGCAGGAAGGATGGAGCAGACAGACCCAAAAGCACTGGCCTCCCAGATGAATCAGGAGGGATGTGCAGGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CCA 72 bp | CCACTGCCACACCTGGCGCCTTCCGTTCAGACTCGCTaGCTGTCTAACCCTAGTCCATGGGAAAACCCAACA | + |
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Preference number: 6 (lower is better) Translates to: PLPHLAPSVQTR*LSNPSPWENPT Trigger: TGTTGGGTTTTCCCATGGACTAGGGTTAGACAGCCAGCGAGTCTGAACGGAAGGCGCCAGGTGTGGCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 72 bp | AAGGCCAGGCACTCCTCAGACCCTGCATTTCCACAATaGGGCTCCATATCGCCCCCTAAACCTGTGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KARHSSDPAFPQ*GSISPPKPVPL Trigger: AAGAGGCACAGGTTTAGGGGGCGATATGGAGCCCCATTGTGGAAATGCAGGGTCTGAGGAGTGCCTGGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 72 bp | GCTCATGTAATAAGGAGTCACATGGCCTCACAGGGTTaGGGCAGTGGCCCAGCCATGCCATCAGGGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: AHVIRSHMASQG*GSGPAMPSGDN Trigger: ATTGTCCCCTGATGGCATGGCTGGGCCACTGCCCCAACCCTGTGAGGCCATGTGACTCCTTATTACATGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CAA 72 bp | TGCTCATGTAATAAGGAGTCACATGGCCTCACAGGGTaGGGGCAGTGGCCCAGCCATGCCATCAGGGGACAA | + |
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Preference number: 6 (lower is better) Translates to: CSCNKESHGLTG*GQWPSHAIRGQ Trigger: TTGTCCCCTGATGGCATGGCTGGGCCACTGCCCCAACCCTGTGAGGCCATGTGACTCCTTATTACATGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS TCA 72 bp | TGCTCCATCCTTCCTGCACTTCACAGGAGGCAACCATaGGCTCTGTGTCTCATCTGCACCTGGGTGAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: CSILPALHRRQP*ALCLICTWVSH Trigger: GTGACTCACCCAGGTGCAGATGAGACACAGAGCTCATGGTTGCCTCCTGTGAAGTGCAGGAAGGATGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 72 bp | TCCGTTCAGACTCGCTGGCTGTCTAACCCTAGTCCATaGGAAAACCCAACAATCCTCAGGAGGTGTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SVQTRWLSNPSP*ENPTILRRCGW Trigger: CCACCCACACCTCCTGAGGATTGTTGGGTTTTCCCATGGACTAGGGTTAGACAGCCAGCGAGTCTGAACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 72 bp | AATAAGGAGTCACATGGCCTCACAGGGTTGGGGCAGTaGCCCAGCCATGCCATCAGGGGACAATTGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NKESHGLTGLGQ*PSHAIRGQLLF Trigger: AAAGAGCAATTGTCCCCTGATGGCATGGCTGGGCCACTGCCCCAACCCTGTGAGGCCATGTGACTCCTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CAA 90 bp | ACTAGCCTGTGCTCATGTAATAAGGAGTCACATGGCCTCACAGGGTaGGGGCAGTGGCCCAGCCATGCCATCAGGGGACAATTGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TSLCSCNKESHGLTG*GQWPSHAIRGQLLF Trigger: AAAGAGCAATTGTCCCCTGATGGCATGGCTGGGCCACTGCCCCAACCCTGTGAGGCCATGTGACTCCTTATTACATGAGCACAGGCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS TCA 72 bp | CTTGCATTGGCAACTAATAATGTCTGCCCCAGTGGGTaGGTGAGGACACTGGCATCTGTCTGCAGGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LALATNNVCPSG*VRTLASVCRGE Trigger: CTCACCCCTGCAGACAGATGCCAGTGTCCTCACTCACCCACTGGGGCAGACATTATTAGTTGCCAATGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CCA 72 bp | ACATCCCTCCTGATTCATCTGGGAGGCCAGTGCTTTTaGGTCTGTCTGCTCCATCCTTCCTGCACTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: TSLLIHLGGQCF*VCLLHPSCTSQ Trigger: CTGTGAAGTGCAGGAAGGATGGAGCAGACAGACCCAAAAGCACTGGCCTCCCAGATGAATCAGGAGGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CAA 72 bp | CACATCCCTCCTGATTCATCTGGGAGGCCAGTGCTTTaGGGTCTGTCTGCTCCATCCTTCCTGCACTTCACA | + |
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Preference number: 6 (lower is better) Translates to: HIPPDSSGRPVL*GLSAPSFLHFT Trigger: TGTGAAGTGCAGGAAGGATGGAGCAGACAGACCCAAAAGCACTGGCCTCCCAGATGAATCAGGAGGGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CAA 90 bp | TCATCCAGCCCCTGCGCTGAGGTCCCTTATAGACTCGGGCGTCATTaGCTGATGATTTCAAATGGCTCCCATGAAATTCCAGGACACGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSPCAEVPYRLGRH*LMISNGSHEIPGHE Trigger: CTCGTGTCCTGGAATTTCATGGGAGCCATTTGAAATCATCAGCAAATGACGCCCGAGTCTATAAGGGACCTCAGCGCAGGGGCTGGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS TCA 72 bp | CTGCCCTGCCAAATCCAAGCTTGTCACCTCTTTCAGTaGTGGCCTTTCAATCACTTTCCTCTCGCCGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPCQIQACHLFQ*WPFNHFPLAGL Trigger: AAGACCGGCGAGAGGAAAGTGATTGAAAGGCCATCACTGAAAGAGGTGACAAGCTTGGATTTGGCAGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS TCA 72 bp | GGCAACCATGAGCTCTGTGTCTCATCTGCACCTGGGTaGGTCACTGGGCAGGGAGAATTATTCAGAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GNHELCVSSAPG*VTGQGELFRKE Trigger: TTCCTTTCTGAATAATTCTCCCTGCCCAGTGACTCACCCAGGTGCAGATGAGACACAGAGCTCATGGTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS TCA 72 bp | CGGGCGTCATTTGCTGATGATTTCAAATGGCTCCCATaGAATTCCAGGACACGAGCCATCTGCGTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RASFADDFKWLP*NSRTRAICVLS Trigger: GGAAAGGACGCAGATGGCTCGTGTCCTGGAATTTCATGGGAGCCATTTGAAATCATCAGCAAATGACGCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 72 bp | GCCATCCTTGATGTTGGCCTTCATTCCTCAGGTCATTaGTTCACAATCACAAAATGGCCGCTGCAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AILDVGLHSSGH*FTITKWPLQLQ Trigger: CTGGAGCTGCAGCGGCCATTTTGTGATTGTGAAGCAATGACCTGAGGAATGAAGGCCAACATCAAGGATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS GCA 72 bp | ATTCACCTGCAGATAGCACAAACCCCGACTAGCCTGTaGTCATGTAATAAGGAGTCACATGGCCTCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: IHLQIAQTPTSL*SCNKESHGLTG Trigger: CCCTGTGAGGCCATGTGACTCCTTATTACATGAGCACAGGCTAGTCGGGGTTTGTGCTATCTGCAGGTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS GCA 72 bp | CCTCAGGTCATTGCTTCACAATCACAAAATGGCCGCTaGAGCTCCAGGCATTGCTTCTGTGTTTTCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PQVIASQSQNGR*SSRHCFCVFRR Trigger: CCTTCTGAAAACACAGAAGCAATGCCTGGAGCTGCAGCGGCCATTTTGTGATTGTGAAGCAATGACCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650670.1 |
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| CDS GCA 72 bp | AGTAAAAGTGCTCAGCATGGTGAGGGAGCTGGCACATaGCATCCAGCTGTGCTTGCTTTGTGTCTTGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SKSAQHGEGAGT*HPAVLALCLAK Trigger: TTTTGCAAGACACAAAGCAAGCACAGCTGGATGGCATGTGCCAGCTCCCTCACCATGCTGAGCACTTTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CAA 72 bp | CCCTGCGCTGAGGTCCCTTATAGACTCGGGCGTCATTaGCTGATGATTTCAAATGGCTCCCATGAAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: PCAEVPYRLGRH*LMISNGSHEIP Trigger: TGGAATTTCATGGGAGCCATTTGAAATCATCAGCAAATGACGCCCGAGTCTATAAGGGACCTCAGCGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CAA 72 bp | CCATCAGGGGACAATTGCTCTTTTCCTCTCTCTGTTTaGCCATCCTTGATGTTGGCCTTCATTCCTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PSGDNCSFPLSV*PSLMLAFIPQV Trigger: GACCTGAGGAATGAAGGCCAACATCAAGGATGGCAAAACAGAGAGAGGAAAAGAGCAATTGTCCCCTGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CAA 90 bp | CTCATTCTGCGGCACCCAAGGCTTTTAGGATGTCAAAATTCCAAATaGGGACCTTCCTACTCCTTTCCCAACGCTCATCTTCACAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: LILRHPRLLGCQNSK*GPSYSFPNAHLHKV Trigger: AACCTTGTGAAGATGAGCGTTGGGAAAGGAGTAGGAAGGTCCCAATTTGGAATTTTGACATCCTAAAAGCCTTGGGTGCCGCAGAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CCA 72 bp | GAAGCCCCAGCAGATCTCTGTGTATGTCTTATTTGTTaGAAGTATCACGTGGCCGCTACTAACTTCAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: EAPADLCVCLIC*KYHVAATNFKG Trigger: TCCCTTGAAGTTAGTAGCGGCCACGTGATACTTCCAACAAATAAGACATACACAGAGATCTGCTGGGGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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| CDS CAA 72 bp | CGGCACCCAAGGCTTTTAGGATGTCAAAATTCCAAATaGGGACCTTCCTACTCCTTTCCCAACGCTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: RHPRLLGCQNSK*GPSYSFPNAHL Trigger: AAGATGAGCGTTGGGAAAGGAGTAGGAAGGTCCCAATTTGGAATTTTGACATCCTAAAAGCCTTGGGTGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CAA 72 bp | GACAATTGCTCTTTTCCTCTCTCTGTTTTGCCATCCTaGATGTTGGCCTTCATTCCTCAGGTCATTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: DNCSFPLSVLPS*MLAFIPQVIAS Trigger: TGAAGCAATGACCTGAGGAATGAAGGCCAACATCAAGGATGGCAAAACAGAGAGAGGAAAAGAGCAATTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000650670.1 ENST00000651009.1 |
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| CDS CCA 72 bp | ATCTCTGTGTATGTCTTATTTGTTGGAAGTATCACGTaGCCGCTACTAACTTCAAGGGAGTCTGAAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ISVYVLFVGSIT*PLLTSRESEKV Trigger: CACCTTTTCAGACTCCCTTGAAGTTAGTAGCGGCCACGTGATACTTCCAACAAATAAGACATACACAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651009.1 |
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