Pregenerated sensors for PCP4 (Homo sapiens)
Ensembl gene IDs: ENSG00000183036Ensembl transcript IDs: ENST00000328619.10, ENST00000462224.5, ENST00000467565.1, ENST00000468717.5
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGAACTGAGACTGAATGGCCACCGCTGCACGTTCTGTCTCTGGTaGATCCATGTCAATGTCAAATTCTTCTTGAACTTTCTTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SELRLNGHRCTFCLW*IHVNVKFFLNFLLS Trigger: GGACAGAAGAAAGTTCAAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGGCCATTCAGTCTCAGTTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| 3UTR GCA 90 bp | CTTCTTCTTCTGGAATTTTCTGAACTGAGACTGAATGGCCACCGCTaGACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LLLLEFSELRLNGHR*TFCLWCIHVNVKFF Trigger: GAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGGCCATTCAGTCTCAGTTCAGAAAATTCCAGAAGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| 3UTR CCA 90 bp | TTTTCTGAACTGAGACTGAATGGCCACCGCTGCACGTTCTGTCTCTaGTGCATCCATGTCAATGTCAAATTCTTCTTGAACTTTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: FSELRLNGHRCTFCL*CIHVNVKFFLNFLL Trigger: CAGAAGAAAGTTCAAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGGCCATTCAGTCTCAGTTCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| 3UTR-3UTR TCA 90 bp | GGCCACCGCTGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTGGATTGTGTGTGGATaGCTTCTCTCTAGGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: GHRCTFCLWCIHVNVKFFWIVCG*LLSRVL Trigger: CAACACCCTAGAGAGAAGTCATCCACACACAATCCA...GAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| 3UTR-3UTR CCA 90 bp | TGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTTGAACTTTATGCTGTTAGAGGAGTaGCAGGAGCTCCTTCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: CTFCLWCIHVNVKFFLNFMLLEE*QELLPL Trigger: CAGCGGAAGGAGCTCCTGCCACTCCTCTAACAGCAT...AAAGTTCAAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| 3UTR-3UTR GCA 90 bp | ATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGATGACTTCTCTCTAGGGACAGGTTTCTGTACATaGATTGGAGGTTTGCTATGC | + |
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Preference number: 2 (lower is better) Translates to: IGGLLCVCGLCVDDFSLGTGFCT*IGGLLC Trigger: GCATAGCAAACCTCCAATGCATGTACAGAAACCTGT...CCCTAGAGAGAAGTCATCCACACACAATCCACACACGCATAGCAAACCTCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGATGACTTCTCTCTAGGGTTGACAGATGATGGTTaGATTTGGTGTTTTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: IGGLLCVCGLCVDDFSLGLTDDG*IWCFQV Trigger: CACCTGAAAACACCAAATTCAACCATCATCTGTCAA...CCCTAGAGAGAAGTCATCCACACACAATCCACACACGCATAGCAAACCTCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR CAA 90 bp | ACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATaGTGTGTGGATGACTTCTCTCTAGGGTGTTGTTCTTTTAATTTC | + |
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Preference number: 2 (lower is better) Translates to: TGFCTCIGGLLCVCG*CVDDFSLGCCSFNF Trigger: GAAATTAAAAGAACAACACCCTAGAGAGAAGTCATCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR-3UTR TCA 90 bp | AAATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTTTGACAGATGATGGTTaGATTTGGTGTTTTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: KYHRFLYMHWRFAMRVWILTDDG*IWCFQV Trigger: CACCTGAAAACACCAAATTCAACCATCATCTGTCAA...AATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR-3UTR GCA 90 bp | ATAGAGATTAAGCTACTCACAATTCCATTGTCTATACCTTCCTACAAGGGTATACATGCATTGGAGGTTTaGTATGCGTGTGTGGATTGT | + |
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Preference number: 2 (lower is better) Translates to: IEIKLLTIPLSIPSYKGIHALEV*YACVDC Trigger: ACAATCCACACACGCATAGCAAACCTCCAATGCATG...TATACCCTTGTAGGAAGGTATAGACAATGGAATTGTGAGTAGCTTAATCTCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAAACATAGAGATTAAGCTACTCACAATTCCATTGTCTATACCTTCCTACACAGGTTTCTGTACATaGATTGGAGGTTTGCTATGC | + |
|
Preference number: 2 (lower is better) Translates to: ERNIEIKLLTIPLSIPSYTGFCT*IGGLLC Trigger: GCATAGCAAACCTCCAATGCATGTACAGAAACCTGT...GTAGGAAGGTATAGACAATGGAATTGTGAGTAGCTTAATCTCTATGTTTCTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR GCA 72 bp | CTGGAATTTTCTGAACTGAGACTGAATGGCCACCGCTaGACGTTCTGTCTCTGGTGCATCCATGTCAATGTC | + |
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Preference number: 3 (lower is better) Translates to: LEFSELRLNGHR*TFCLWCIHVNV Trigger: GACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGGCCATTCAGTCTCAGTTCAGAAAATTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| 3UTR CCA 72 bp | CTGAGACTGAATGGCCACCGCTGCACGTTCTGTCTCTaGTGCATCCATGTCAATGTCAAATTCTTCTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: LRLNGHRCTFCL*CIHVNVKFFLN Trigger: GTTCAAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGGCCATTCAGTCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| 3UTR GCA 72 bp | ATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATaGGTGTGTGGATTGTGTGTGGATGACTTCTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: ITGFCTCIGGLL*VCGLCVDDFSL Trigger: TAGAGAGAAGTCATCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR-3UTR CAA 90 bp | ATAGAGATTAAGCTACTCACAATTCCATTGTCTATACCTTCCTACAAGGGTATAACATGCATTGGAGGTTaGCTATGCGTGTGTGGATTG | + |
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Preference number: 3 (lower is better) Translates to: IEIKLLTIPLSIPSYKGITCIGG*LCVCGL Trigger: CAATCCACACACGCATAGCAAACCTCCAATGCATGT...TATACCCTTGTAGGAAGGTATAGACAATGGAATTGTGAGTAGCTTAATCTCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR-3UTR CAA 90 bp | ATAGAGATTAAGCTACTCACAATTCCATTGTCTATACCTTCCTACAAGGGTATAGTTTCTGTACATGCATaGGAGGTTTGCTATGCGTGT | + |
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Preference number: 3 (lower is better) Translates to: IEIKLLTIPLSIPSYKGIVSVHA*EVCYAC Trigger: ACACGCATAGCAAACCTCCAATGCATGTACAGAAAC...TATACCCTTGTAGGAAGGTATAGACAATGGAATTGTGAGTAGCTTAATCTCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR TCA 90 bp | CCACCGCTGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTTAGGAGCTCCTTCCGCTaGGCCAGTCAGGAGTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: PPLHVLSLVHPCQCQILLRSSFR*ASQECV Trigger: TACACACTCCTGACTGGCTCAGCGGAAGGAGCTCCT...AAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR GCA 90 bp | CCACCGCTGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTTCTGAATGGCCACCGCTaGACGTTCTGTCTCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PPLHVLSLVHPCQCQILLLNGHR*TFCLWC Trigger: GCACCAGAGACAGAACGTGCAGCGGTGGCCATTCAG...AAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR GCA 90 bp | AATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGCTGAATGGCCACCGCTaGACGTTCTGTCTCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: NITGFCTCIGGLLCVCGLLNGHR*TFCLWC Trigger: GCACCAGAGACAGAACGTGCAGCGGTGGCCATTCAG...CAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR GCA 90 bp | GAATGGCCACCGCTGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCATGCATTGGAGGTTTaGTATGCGTGTGTGGATTGT | + |
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Preference number: 4 (lower is better) Translates to: EWPPLHVLSLVHPCQCQIHALEV*YACVDC Trigger: ACAATCCACACACGCATAGCAAACCTCCAATGCATG...AATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGGCCATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR TCA 90 bp | AGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGATGGATTGTGTGTGGATaGCTTCTCTCTAGGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RFLYMHWRFAMRVWIVCGWIVCG*LLSRVL Trigger: CAACACCCTAGAGAGAAGTCATCCACACACAATCCA...TCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR GCA 90 bp | ATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTCTTTTCCATTGGTTaGCCCAGCACCTTGTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: ISQVSVHALEVCYACVDCVFSIG*PSTLSL Trigger: GAGCGACAAGGTGCTGGGGCAACCAATGGAAAAGAC...ACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR GCA 90 bp | TGGTTGAATTTGGTGTTTTCAGGTGGACTAGGAGGGGGTTCTCCCACTAGGACTACAGGTTTCTGTACATaGATTGGAGGTTTGCTATGC | + |
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Preference number: 4 (lower is better) Translates to: WLNLVFSGGLGGGSPTRTTGFCT*IGGLLC Trigger: GCATAGCAAACCTCCAATGCATGTACAGAAACCTGT...AGTCCTAGTGGGAGAACCCCCTCCTAGTCCACCTGAAAACACCAAATTCAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| 3UTR CAA 72 bp | TGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATaGTGTGTGGATGACTTCTCTCTAGGGTGTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: CTCIGGLLCVCG*CVDDFSLGCCS Trigger: AGAACAACACCCTAGAGAGAAGTCATCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CCA 90 bp | GGGTATAAATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTCTTGTCTTTTCCATTaGTTGCCCCAGCACCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: GYKYHRFLYMHWRFAMRVSCLFH*LPQHLV Trigger: GACAAGGTGCTGGGGCAACCAATGGAAAAGACAAGA...CACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATTTATACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CCA 90 bp | TTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGATGACTTTCTGTACATGCATTaGAGGTTTGCTATGCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: FCTCIGGLLCVCGLCVDDFLYMH*RFAMRV Trigger: CACACGCATAGCAAACCTCCAATGCATGTACAGAAA...GTCATCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR GCA 90 bp | ATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTCATGCATTGGAGGTTTaGTATGCGTGTGTGGATTGT | + |
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Preference number: 4 (lower is better) Translates to: ISQVSVHALEVCYACVDCHALEV*YACVDC Trigger: ACAATCCACACACGCATAGCAAACCTCCAATGCATG...ACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CCA 90 bp | AAATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTTCTTGTCTTTTCCATTaGTTGCCCCAGCACCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: KYHRFLYMHWRFAMRVWISCLFH*LPQHLV Trigger: GACAAGGTGCTGGGGCAACCAATGGAAAAGACAAGA...AATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CCA 90 bp | ATAGAGATTAAGCTACTCACAATTCCATTGTCTATACCTTCCTACAAGGGTATAATGCTGTTAGAGGAGTaGCAGGAGCTCCTTCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: IEIKLLTIPLSIPSYKGIMLLEE*QELLPL Trigger: CAGCGGAAGGAGCTCCTGCCACTCCTCTAACAGCAT...TATACCCTTGTAGGAAGGTATAGACAATGGAATTGTGAGTAGCTTAATCTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR GCA 90 bp | TGGTGCATCCATGTCAATGTCAAATTCTTCTTGAACTTTCTTCTGTCCATATTTGTCTTTTCCATTGGTTaGCCCAGCACCTTGTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: WCIHVNVKFFLNFLLSIFVFSIG*PSTLSL Trigger: GAGCGACAAGGTGCTGGGGCAACCAATGGAAAAGAC...AAATATGGACAGAAGAAAGTTCAAGAAGAATTTGACATTGACATGGATGCACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR GCA 90 bp | ATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTACAGGTTTCTGTACATaGATTGGAGGTTTGCTATGC | + |
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Preference number: 4 (lower is better) Translates to: ISQVSVHALEVCYACVDCTGFCT*IGGLLC Trigger: GCATAGCAAACCTCCAATGCATGTACAGAAACCTGT...ACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR CAA 72 bp | ATAAATATCACAGGTTTCTGTACATGCATTGGAGGTTaGCTATGCGTGTGTGGATTGTGTGTGGATGACTTC | + |
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Preference number: 4 (lower is better) Translates to: INITGFCTCIGG*LCVCGLCVDDF Trigger: GAAGTCATCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR TCA 90 bp | AAATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTTCTTCTGGAATTTTCTaGACTGAGACTGAATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KYHRFLYMHWRFAMRVWISSGIF*TETEWP Trigger: TGGCCATTCAGTCTCAGTTCAGAAAATTCCAGAAGA...AATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR TCA 90 bp | GGTATAAATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTTCTTCTGGAATTTTCTaGACTGAGACTGAATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GINITGFCTCIGGLLCVCSSGIF*TETEWP Trigger: TGGCCATTCAGTCTCAGTTCAGAAAATTCCAGAAGA...ACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATTTATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR TCA 90 bp | GGGTATAAATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTTGACAGATGATGGTTaGATTTGGTGTTTTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GYKYHRFLYMHWRFAMRVLTDDG*IWCFQV Trigger: CACCTGAAAACACCAAATTCAACCATCATCTGTCAA...CACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATTTATACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CCA 90 bp | AACATAGAGATTAAGCTACTCACAATTCCATTGTCTATACCTTCCTACAAGGGTTGCACGTTCTGTCTCTaGTGCATCCATGTCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: NIEIKLLTIPLSIPSYKGCTFCL*CIHVNV Trigger: GACATTGACATGGATGCACCAGAGACAGAACGTGCA...ACCCTTGTAGGAAGGTATAGACAATGGAATTGTGAGTAGCTTAATCTCTATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CCA 90 bp | ATAAATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTTCTGTACATGCATTaGAGGTTTGCTATGCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: INITGFCTCIGGLLCVCGFLYMH*RFAMRV Trigger: CACACGCATAGCAAACCTCCAATGCATGTACAGAAA...TCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR TCA 90 bp | TGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTTGAACTTTTTGACAGATGATGGTTaGATTTGGTGTTTTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: CTFCLWCIHVNVKFFLNFLTDDG*IWCFQV Trigger: CACCTGAAAACACCAAATTCAACCATCATCTGTCAA...AAAGTTCAAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR GCA 90 bp | AACATAGAGATTAAGCTACTCACAATTCCATTGTCTATACCTTCCTACAAGGGTATTGGAGGTTTGCTATaGGTGTGTGGATTGTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NIEIKLLTIPLSIPSYKGIGGLL*VCGLCV Trigger: CACACACAATCCACACACGCATAGCAAACCTCCAAT...ACCCTTGTAGGAAGGTATAGACAATGGAATTGTGAGTAGCTTAATCTCTATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| 3UTR CAA 72 bp | TGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTaGAACTTTCTTCTGTCCATATTTAAGGAATCGCTA | + |
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Preference number: 4 (lower is better) Translates to: CLWCIHVNVKFF*NFLLSIFKESL Trigger: TAGCGATTCCTTAAATATGGACAGAAGAAAGTTCAAGAAGAATTTGACATTGACATGGATGCACCAGAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS CCA 90 bp | TCCAGTTCCCGGGGCGGCGGGGAAGGTCAGATGCTGTTAGAGGAGTaGCAGGAGCTCCTTCCGCTGAGCCAGTCAGGAGTGTGTAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: SSSRGGGEGQMLLEE*QELLPLSQSGVCKE Trigger: TTCCTTACACACTCCTGACTGGCTCAGCGGAAGGAGCTCCTGCCACTCCTCTAACAGCATCTGACCTTCCCCGCCGCCCCGGGAACTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | CATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGATGACTTCTCTCTGTCTTTTCCATTGGTaGCCCCAGCACCTTGTCGCT | + |
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Preference number: 5 (lower is better) Translates to: HALEVCYACVDCVWMTSLCLFHW*PQHLVA Trigger: AGCGACAAGGTGCTGGGGCAACCAATGGAAAAGACA...GAGAGAAGTCATCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | CAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGTGTCGCTCACTCATGTaGGCTCTAACTCAACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: QVSVHALEVCYACVDCVWCRSLM*ALTQQL Trigger: GAGCTGTTGAGTTAGAGCCAACATGAGTGAGCGACA...CCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | AAATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGGTTGCCCCAGCACCTaGTCGCTCACTCATGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: KYHRFLYMHWRFAMRVWIGCPST*SLTHVG Trigger: GCCAACATGAGTGAGCGACAAGGTGCTGGGGCAACC...AATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | TGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTTGAACTTTGGTTGCCCCAGCACCTaGTCGCTCACTCATGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: CTFCLWCIHVNVKFFLNFGCPST*SLTHVG Trigger: GCCAACATGAGTGAGCGACAAGGTGCTGGGGCAACC...AAAGTTCAAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | CCACCGCTGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTTCTATGCGTGTGTGGATaGTGTGTGGATGACTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PPLHVLSLVHPCQCQILLLCVCG*CVDDFS Trigger: AGAGAAGTCATCCACACACAATCCACACACGCATAG...AAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | TGGTTGAATTTGGTGTTTTCAGGTGGACTAGGAGGGGGTTCTCCCACTAGGACTGTTTCTGTACATGCATaGGAGGTTTGCTATGCGTGT | + |
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Preference number: 5 (lower is better) Translates to: WLNLVFSGGLGGGSPTRTVSVHA*EVCYAC Trigger: ACACGCATAGCAAACCTCCAATGCATGTACAGAAAC...AGTCCTAGTGGGAGAACCCCCTCCTAGTCCACCTGAAAACACCAAATTCAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | TTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGATGACCTATGCGTGTGTGGATaGTGTGTGGATGACTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: FCTCIGGLLCVCGLCVDDLCVCG*CVDDFS Trigger: AGAGAAGTCATCCACACACAATCCACACACGCATAG...GTCATCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | AGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGAACATGCATTGGAGGTTaGCTATGCGTGTGTGGATTG | + |
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Preference number: 5 (lower is better) Translates to: RFLYMHWRFAMRVWIVCGTCIGG*LCVCGL Trigger: CAATCCACACACGCATAGCAAACCTCCAATGCATGT...TCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | CATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGATGACTTCTCTCGTTTCTGTACATGCATaGGAGGTTTGCTATGCGTGT | + |
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Preference number: 5 (lower is better) Translates to: HALEVCYACVDCVWMTSLVSVHA*EVCYAC Trigger: ACACGCATAGCAAACCTCCAATGCATGTACAGAAAC...GAGAGAAGTCATCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | ATATCACAGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTTGTCGCTCACTCATGTaGGCTCTAACTCAACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: ISQVSVHALEVCYACVDCCRSLM*ALTQQL Trigger: GAGCTGTTGAGTTAGAGCCAACATGAGTGAGCGACA...ACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCTGTGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | CCACCGCTGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTTTTTTCACCAGATGTCTaGTCTTTTCCATTGGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: PPLHVLSLVHPCQCQILLFSPDV*SFPLVA Trigger: GGCAACCAATGGAAAAGACAAGACATCTGGTGAAAA...AAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCAGCGGTGG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | AGGTTTCTGTACATGCATTGGAGGTTTGCTATGCGTGTGTGGATTGTGTGTGGATTTTCACCAGATGTCTaGTCTTTTCCATTGGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: RFLYMHWRFAMRVWIVCGFSPDV*SFPLVA Trigger: GGCAACCAATGGAAAAGACAAGACATCTGGTGAAAA...TCCACACACAATCCACACACGCATAGCAAACCTCCAATGCATGTACAGAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS CCA 90 bp | GGCTCTACCTGTGTTACGAAGTTGTTAATTTCAGCTGAAGTTTCCTaGATCTCTGATTCCAACGGATGCATTTTGTGTGTTTTGTACAAA | + |
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Preference number: 5 (lower is better) Translates to: GSTCVTKLLISAEVS*ISDSNGCILCVLYK Trigger: TTTGTACAAAACACACAAAATGCATCCGTTGGAATCAGAGATCCAGGAAACTTCAGCTGAAATTAACAACTTCGTAACACAGGTAGAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468717.5 |
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| CDS-3UTR CAA 90 bp | TGCACGTTCTGTCTCTGGTGCATCCATGTCAATGTCAAATTCTTCTTGAACTTTCTACTCACAATTCCATaGTCTATACCTTCCTACAAG | + |
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Preference number: 5 (lower is better) Translates to: CTFCLWCIHVNVKFFLNFLLTIP*SIPSYK Trigger: CTTGTAGGAAGGTATAGACAATGGAATTGTGAGTAG...AAAGTTCAAGAAGAATTTGACATTGACATGGATGCACCAGAGACAGAACGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462224.5 |
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| CDS-3UTR CAA 90 bp | GAGAGAAACATAGAGATTAAGCTACTCACAATTCCATTGTCTATACCTTCCTACCTACTCACAATTCCATaGTCTATACCTTCCTACAAG | + |
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Preference number: 5 (lower is better) Translates to: ERNIEIKLLTIPLSIPSYLLTIP*SIPSYK Trigger: CTTGTAGGAAGGTATAGACAATGGAATTGTGAGTAG...GTAGGAAGGTATAGACAATGGAATTGTGAGTAGCTTAATCTCTATGTTTCTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328619.10 ENST00000462224.5 |
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| CDS CAA 90 bp | TTCTGTCCATCAAATGCCTTCTTCTCTCTGAGCACATGGAAAGAATaGAAATTCCTTCCCAGGAATCAGCAGCTAGCTGCCCCAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: FCPSNAFFSLSTWKE*KFLPRNQQLAAPTA Trigger: TGCTGTTGGGGCAGCTAGCTGCTGATTCCTGGGAAGGAATTTCAATTCTTTCCATGTGCTCAGAGAGAAGAAGGCATTTGATGGACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467565.1 |
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| CDS GCA 72 bp | TCAGCTGAAGTTTCCTGGATCTCTGATTCCAACGGATaGATTTTGTGTGTTTTGTACAAATCACAGCTCATA | + |
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Preference number: 6 (lower is better) Translates to: SAEVSWISDSNG*ILCVLYKSQLI Trigger: TATGAGCTGTGATTTGTACAAAACACACAAAATGCATCCGTTGGAATCAGAGATCCAGGAAACTTCAGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468717.5 |
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| CDS CCA 72 bp | TGTGTTACGAAGTTGTTAATTTCAGCTGAAGTTTCCTaGATCTCTGATTCCAACGGATGCATTTTGTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: CVTKLLISAEVS*ISDSNGCILCV Trigger: AACACACAAAATGCATCCGTTGGAATCAGAGATCCAGGAAACTTCAGCTGAAATTAACAACTTCGTAACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468717.5 |
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