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Pregenerated sensors for PCP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000174788

Ensembl transcript IDs: ENST00000311069.6, ENST00000598935.5

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GGGGTCGCTCTGGCTCTTGGTGGTCTGGCCCGGCCCGGCTTGCAGTaGACAGCGCTGTCCCTCCATCCGGTCGCCCTGCACGTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: GVALALGGLARPGLQ*TALSLHPVALHVAQ
Trigger: CTGAGCCACGTGCAGGGCGACCGGATGGAGGGACAGCGCTGTTCACTGCAAGCCGGGCCGGGCCAGACCACCAAGAGCCAGAGCGACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311069.6
ENST00000598935.5
CDS TCA 90 bp AGCGCTGTCCCTCCATCCGGTCGCCCTGCACGTGGCTCAGCAGATTaGAGAAGCCCTCCTGGTCTGGGGAGCCCGCCTCGGCACAGGGGC +
Preference number: 5 (lower is better)
Translates to: SAVPPSGRPARGSAD*RSPPGLGSPPRHRG
Trigger: GCCCCTGTGCCGAGGCGGGCTCCCCAGACCAGGAGGGCTTCTTCAATCTGCTGAGCCACGTGCAGGGCGACCGGATGGAGGGACAGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311069.6
CDS TCA 90 bp AGCGCTGTCCCTCCATCCGGTCGCCCTGCACGTGGCTCAGCAGATTaGAGAAGCCCTCCTGGTCTGGGGAGCCCGCCATGGTCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: SAVPPSGRPARGSAD*RSPPGLGSPPWSPP
Trigger: CGGCGGGGACCATGGCGGGCTCCCCAGACCAGGAGGGCTTCTTCAATCTGCTGAGCCACGTGCAGGGCGACCGGATGGAGGGACAGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598935.5
CDS CCA 90 bp GACCCCACGGGCTGGAAGCCGGGCAGGCTGCTGACTGTCACACGTTaGTCATCCATGCGGCGGCCCTGGGTACTGGCCAGCATGTCCATG +
Preference number: 5 (lower is better)
Translates to: DPTGWKPGRLLTVTR*SSMRRPWVLASMSM
Trigger: CATGGACATGCTGGCCAGTACCCAGGGCCGCCGCATGGATGACCAACGTGTGACAGTCAGCAGCCTGCCCGGCTTCCAGCCCGTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311069.6
ENST00000598935.5
CDS TCA 90 bp GTTGGTCATCCATGCGGCGGCCCTGGGTACTGGCCAGCATGTCCATaGGGCTGTCCATCTCGGGGGTGGGGTCGCTCTGGCTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: VGHPCGGPGYWPACP*GCPSRGWGRSGSWW
Trigger: CCACCAAGAGCCAGAGCGACCCCACCCCCGAGATGGACAGCCTCATGGACATGCTGGCCAGTACCCAGGGCCGCCGCATGGATGACCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311069.6
ENST00000598935.5
CDS CCA 90 bp GCTTGCAGTGAACAGCGCTGTCCCTCCATCCGGTCGCCCTGCACGTaGCTCAGCAGATTGAAGAAGCCCTCCTGGTCTGGGGAGCCCGCC +
Preference number: 5 (lower is better)
Translates to: ACSEQRCPSIRSPCT*LSRLKKPSWSGEPA
Trigger: GGCGGGCTCCCCAGACCAGGAGGGCTTCTTCAATCTGCTGAGCCACGTGCAGGGCGACCGGATGGAGGGACAGCGCTGTTCACTGCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311069.6
ENST00000598935.5
CDS CCA 90 bp GGCAGGCTGCTGACTGTCACACGTTGGTCATCCATGCGGCGGCCCTaGGTACTGGCCAGCATGTCCATGAGGCTGTCCATCTCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GRLLTVTRWSSMRRP*VLASMSMRLSISGV
Trigger: CACCCCCGAGATGGACAGCCTCATGGACATGCTGGCCAGTACCCAGGGCCGCCGCATGGATGACCAACGTGTGACAGTCAGCAGCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311069.6
ENST00000598935.5
CDS TCA 90 bp CCCGCCTCGGCACAGGGGCCTGAGCCTTCCTCCGTCTTCTCCTCCTaGTCCATCATGTCCCTGGACTCCAGTCACTTTTCTGCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: PASAQGPEPSSVFSS*SIMSLDSSHFSAGL
Trigger: GAGGCCAGCAGAAAAGTGACTGGAGTCCAGGGACATGATGGATCAGGAGGAGAAGACGGAGGAAGGCTCAGGCCCCTGTGCCGAGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311069.6
CDS TCA 72 bp CTGGCTCTTGGTGGTCTGGCCCGGCCCGGCTTGCAGTaGACAGCGCTGTCCCTCCATCCGGTCGCCCTGCAC +
Preference number: 6 (lower is better)
Translates to: LALGGLARPGLQ*TALSLHPVALH
Trigger: GTGCAGGGCGACCGGATGGAGGGACAGCGCTGTTCACTGCAAGCCGGGCCGGGCCAGACCACCAAGAGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311069.6
ENST00000598935.5
CDS GCA 72 bp TCGCTCTGGCTCTTGGTGGTCTGGCCCGGCCCGGCTTaGAGTGAACAGCGCTGTCCCTCCATCCGGTCGCCC +
Preference number: 6 (lower is better)
Translates to: SLWLLVVWPGPA*SEQRCPSIRSP
Trigger: GGGCGACCGGATGGAGGGACAGCGCTGTTCACTGCAAGCCGGGCCGGGCCAGACCACCAAGAGCCAGAGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311069.6
ENST00000598935.5
CDS CCA 72 bp ATCTCGGGGGTGGGGTCGCTCTGGCTCTTGGTGGTCTaGCCCGGCCCGGCTTGCAGTGAACAGCGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: ISGVGSLWLLVV*PGPACSEQRCP
Trigger: GGGACAGCGCTGTTCACTGCAAGCCGGGCCGGGCCAGACCACCAAGAGCCAGAGCGACCCCACCCCCGAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311069.6
ENST00000598935.5
CDS TCA 72 bp CCTCCATCCGGTCGCCCTGCACGTGGCTCAGCAGATTaGAGAAGCCCTCCTGGTCTGGGGAGCCCGCCTCGG +
Preference number: 6 (lower is better)
Translates to: PPSGRPARGSAD*RSPPGLGSPPR
Trigger: CCGAGGCGGGCTCCCCAGACCAGGAGGGCTTCTTCAATCTGCTGAGCCACGTGCAGGGCGACCGGATGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311069.6
CDS TCA 72 bp CCTCCATCCGGTCGCCCTGCACGTGGCTCAGCAGATTaGAGAAGCCCTCCTGGTCTGGGGAGCCCGCCATGG +
Preference number: 6 (lower is better)
Translates to: PPSGRPARGSAD*RSPPGLGSPPW
Trigger: CCATGGCGGGCTCCCCAGACCAGGAGGGCTTCTTCAATCTGCTGAGCCACGTGCAGGGCGACCGGATGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598935.5
CDS TCA 72 bp CTGGATCTGGCATGGTGGGTAGGGGGCAGGGCGACCTaGGCTTGGACCTCGCTGTGCCCAGCAGCAATGACT +
Preference number: 6 (lower is better)
Translates to: LDLAWWVGGRAT*AWTSLCPAAMT
Trigger: AGTCATTGCTGCTGGGCACAGCGAGGTCCAAGCTCAGGTCGCCCTGCCCCCTACCCACCATGCCAGATCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311069.6
CDS GCA 72 bp CTGATCCATCATGTCCCTGGACTCCAGTCACTTTTCTaGTGGCCTCTGCCCCGGCCCAGTGCCAGAGAGGGC +
Preference number: 6 (lower is better)
Translates to: LIHHVPGLQSLF*WPLPRPSAREG
Trigger: GCCCTCTCTGGCACTGGGCCGGGGCAGAGGCCAGCAGAAAAGTGACTGGAGTCCAGGGACATGATGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311069.6
CDS CCA 72 bp CTGACTGTCACACGTTGGTCATCCATGCGGCGGCCCTaGGTACTGGCCAGCATGTCCATGAGGCTGTCCATC +
Preference number: 6 (lower is better)
Translates to: LTVTRWSSMRRP*VLASMSMRLSI
Trigger: GATGGACAGCCTCATGGACATGCTGGCCAGTACCCAGGGCCGCCGCATGGATGACCAACGTGTGACAGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311069.6
ENST00000598935.5
CDS CAA 90 bp CTCCCACCCAAGCTTAAGCCCCATAAAGATCATCCAGATAATTGTTaGCCCACAACGATGCTGGATCTGGCATGGTGGGTAGGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: LPPKLKPHKDHPDNC*PTTMLDLAWWVGGR
Trigger: CCTGCCCCCTACCCACCATGCCAGATCCAGCATCGTTGTGGGCAAACAATTATCTGGATGATCTTTATGGGGCTTAAGCTTGGGTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311069.6