RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCOLCE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163710

Ensembl transcript IDs: ENST00000295992.8, ENST00000461818.5, ENST00000470310.5, ENST00000470795.5, ENST00000480473.5, ENST00000483454.1, ENST00000483986.1, ENST00000485766.1, ENST00000493733.1, ENST00000495732.5, ENST00000648195.1

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGTTCTGGAGGCTGGGAAGTCCAAAGTCAAGGGCCCACATCTGGTaGCGGCCTGAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGAT +
Preference number: 1 (lower is better)
Translates to: QFWRLGSPKSRAHIW*RPEEVFPLVMQKLD
Trigger: ATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGGCCCTTGACTTTGGACTTCCCAGCCTCCAGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
3UTR GCA 90 bp GGGCCCACATCTGGTGACGGCCTGAAGAAGTCTTTCCGCTGGTCATaGAGAAGCTTGATACCCGCCAGCATGCTGCTTGTAATTCACCAA +
Preference number: 1 (lower is better)
Translates to: GPTSGDGLKKSFRWS*RSLIPASMLLVIHQ
Trigger: TTGGTGAATTACAAGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
3UTR CCA 90 bp AGTCAAGGGCCCACATCTGGTGACGGCCTGAAGAAGTCTTTCCGCTaGTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCTTGTAATT +
Preference number: 1 (lower is better)
Translates to: SQGPTSGDGLKKSFR*SCRSLIPASMLLVI
Trigger: AATTACAAGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGGCCCTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
3UTR GCA 90 bp GCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTaGTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGA +
Preference number: 1 (lower is better)
Translates to: ASYHRTKSAGFQSDS*SSDSRQRTSLSYLG
Trigger: TCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
3UTR TCA 90 bp AAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTaGAGAGTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATA +
Preference number: 1 (lower is better)
Translates to: KNFPQLSRRPHTSIM*RVNQSHLSESSFRI
Trigger: TATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
3UTR-3UTR GCA 90 bp GATCGAGACTGTGGCGTGCAAACTCCCATCGCGAGTGATGGTTGTGATAACAGTCACTTGAACAATAATTaGCCTCCAGAGTCCCCGTCC +
Preference number: 2 (lower is better)
Translates to: DRDCGVQTPIASDGCDNSHLNNN*PPESPS
Trigger: GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTG...ACTGTTATCACAACCATCACTCGCGATGGGAGTTTGCACGCCACAGTCTCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
3UTR-3UTR CCA 90 bp GTAGATGTTGATGATCGAGACTGTGGCGTGCAAACTCCCATCGCGAGTGATGGTTCTCTCAGACACAATTaGCGCAGGTGGACTATCACC +
Preference number: 2 (lower is better)
Translates to: VDVDDRDCGVQTPIASDGSLRHN*RRWTIT
Trigger: GGTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGA...ACCATCACTCGCGATGGGAGTTTGCACGCCACAGTCTCGATCATCAACATCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480473.5
3UTR-3UTR CCA 90 bp GATCGAGACTGTGGCGTGCAAACTCCCATCGCGAGTGATGGTTGTGATAACAGTGACACAAGGCCACGGTaGGTTTTAAACCCGTGGTTA +
Preference number: 2 (lower is better)
Translates to: DRDCGVQTPIASDGCDNSDTRPR*VLNPWL
Trigger: TAACCACGGGTTTAAAACCCACCGTGGCCTTGTGTC...ACTGTTATCACAACCATCACTCGCGATGGGAGTTTGCACGCCACAGTCTCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
3UTR-3UTR TCA 90 bp GGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCGCATCCAGGAGCTTCTaGTTCTTGGTCTTGAACATC +
Preference number: 2 (lower is better)
Translates to: GFQSDSCSSDSRQRTSLSASRSF*FLVLNI
Trigger: GATGTTCAAGACCAAGAATCAGAAGCTCCTGGATGC...GCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648195.1
3UTR-3UTR GCA 90 bp ACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATTTCCAATCAGATAGCTaGTCCTCTGACAGCAGGCAA +
Preference number: 2 (lower is better)
Translates to: TAGKELPSAISEASYLHHFQSDS*SSDSRQ
Trigger: TTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAA...ATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
3UTR-3UTR TCA 90 bp TGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCATACCTCCATCATGTaGAGAGTCAACCAGTCCCAT +
Preference number: 2 (lower is better)
Translates to: CQRLTLLASYHRTKSAGFHTSIM*RVNQSH
Trigger: ATGGGACTGGTTGACTCTTCACATGATGGAGGTATG...GAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
3UTR-3UTR CCA 90 bp CAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCCATGATAAAGCTGTTTaGCATGATTTTGCCTCGCCC +
Preference number: 2 (lower is better)
Translates to: QSDSCSSDSRQRTSLSYLHDKAV*HDFASP
Trigger: GGGCGAGGCAAAATCATGCCAAACAGCTTTATCATG...GAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648195.1
3UTR-3UTR CCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGAGAATACAGCTTAAATaGACACAGTTCACTGTTAAC +
Preference number: 2 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEERIQLK*TQFTVN
Trigger: GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCT...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648195.1
3UTR-3UTR TCA 90 bp GTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATATGTAATTTTATAAGTAGATTCTCCATCATGTaGAGAGTCAACCAGTCCCAT +
Preference number: 2 (lower is better)
Translates to: VNQSHLSESSFRICNFISRFSIM*RVNQSH
Trigger: ATGGGACTGGTTGACTCTTCACATGATGGAGAATCT...ACTTATAAAATTACATATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470310.5
3UTR TCA 72 bp AGGCTGGGAAGTCCAAAGTCAAGGGCCCACATCTGGTaGCGGCCTGAAGAAGTCTTTCCGCTGGTCATGCAG +
Preference number: 3 (lower is better)
Translates to: RLGSPKSRAHIW*RPEEVFPLVMQ
Trigger: CTGCATGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGGCCCTTGACTTTGGACTTCCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
3UTR CCA 72 bp CCCACATCTGGTGACGGCCTGAAGAAGTCTTTCCGCTaGTCATGCAGAAGCTTGATACCCGCCAGCATGCTG +
Preference number: 3 (lower is better)
Translates to: PTSGDGLKKSFR*SCRSLIPASML
Trigger: CAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
3UTR GCA 72 bp TCTGGTGACGGCCTGAAGAAGTCTTTCCGCTGGTCATaGAGAAGCTTGATACCCGCCAGCATGCTGCTTGTA +
Preference number: 3 (lower is better)
Translates to: SGDGLKKSFRWS*RSLIPASMLLV
Trigger: TACAAGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
3UTR TCA 72 bp CCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTaGAGAGTCAACCAGTCCCATCTTTCGGAATCCTCT +
Preference number: 3 (lower is better)
Translates to: PQLSRRPHTSIM*RVNQSHLSESS
Trigger: AGAGGATTCCGAAAGATGGGACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
3UTR-3UTR CAA 90 bp TGCAAACTCCCATCGCGAGTGATGGTTGTGATAACAGTGCCGGCTAATACAAAGTTCTCTCAGACACAATaGGCGCAGGTGGACTATCAC +
Preference number: 3 (lower is better)
Translates to: CKLPSRVMVVITVPANTKFSQTQ*AQVDYH
Trigger: GTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGAA...CTTTGTATTAGCCGGCACTGTTATCACAACCATCACTCGCGATGGGAGTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480473.5
3UTR GCA 72 bp CAGTGCCGGCTAATACAAAGTCACTTGAACAATAATTaGCCTCCAGAGTCCCCGTCCGTCTACACTTTTGTT +
Preference number: 3 (lower is better)
Translates to: QCRLIQSHLNNN*PPESPSVYTFV
Trigger: AACAAAAGTGTAGACGGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTATTAGCCGGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
3UTR CCA 72 bp AAAGAACAGATATTTATTTCTTACAGTTCTGGAGGCTaGGAAGTCCAAAGTCAAGGGCCCACATCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: KEQIFISYSSGG*EVQSQGPTSGD
Trigger: GTCACCAGATGTGGGCCCTTGACTTTGGACTTCCCAGCCTCCAGAACTGTAAGAAATAAATATCTGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
3UTR-3UTR CAA 90 bp TTAAGCATTGATTTAGAAAACGCAAGACAAGATTGTAACACCTCAGGGCAAAGGCCAAGCTGTCAACGCTaGACACTTTTAGCTTCCTAT +
Preference number: 3 (lower is better)
Translates to: LSIDLENARQDCNTSGQRPSCQR*TLLASY
Trigger: ATAGGAAGCTAAAAGTGTCAAGCGTTGACAGCTTGG...CCTTTGCCCTGAGGTGTTACAATCTTGTCTTGCGTTTTCTAAATCAATGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295992.8
3UTR TCA 72 bp AACCCATCTGCAGTTAAACTTAAGTCTGATAAAAACTaGATAAGAAGTTCATTTCTCTCAGACACAATTGGC +
Preference number: 3 (lower is better)
Translates to: NPSAVKLKSDKN*IRSSFLSDTIG
Trigger: GCCAATTGTGTCTGAGAGAAATGAACTTCTTATTCAGTTTTTATCAGACTTAAGTTTAACTGCAGATGGGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR GCA 90 bp AGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCACACCGGCGCTCGGCTaGCCGCGCGCTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SCSSDSRQRTSLSYLGGLTPALG*PRAPSH
Trigger: GTGAGAGGGAGCGCGCGGGCAGCCGAGCGCCGGTGT...GAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp AGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCCACTGGCAGCAGCGCTaGCTCACACCGGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SCSSDSRQRTSLSYLGGLHWQQR*LTPALG
Trigger: GCCGAGCGCCGGTGTGAGCCAGCGCTGCTGCCAGTG...GAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCACACCGGCGCTCGGCTaGCCGCGCGCTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: PSAISEASYLHHVKSQPVTPALG*PRAPSH
Trigger: GTGAGAGGGAGCGCGCGGGCAGCCGAGCGCCGGTGT...GACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCCACTGGCAGCAGCGCTaGCTCACACCGGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: YHRTKSAGFQSDSCSSDSHWQQR*LTPALG
Trigger: GCCGAGCGCCGGTGTGAGCCAGCGCTGCTGCCAGTG...GCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp AGCTGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTGCCGCGAGAGCTGGGTaGCGGCAGCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SCQRLTLLASYHRTKSAGAARAG*RQPAAG
Trigger: GCCTGCTGCTGGCTGCCGCCACCCAGCTCTCGCGGC...ACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp AGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTGCCGCGAGAGCTGGGTaGCGGCAGCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRQVSNQIAAPLTAGKELAARAG*RQPAAG
Trigger: GCCTGCTGCTGGCTGCCGCCACCCAGCTCTCGCGGC...AAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp GCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCTGCTGCCGCGAGAGCTaGGTGGCGGCAGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGFQSDSCSSDSRQRTSLCCRES*VAAASS
Trigger: GCTGCTGGCTGCCGCCACCCAGCTCTCGCGGCAGCA...GAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCCCATGCTGCCGCGAGAGCTaGGTGGCGGCAGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SAISEASYLHHVKSQPVPCCRES*VAAASS
Trigger: GCTGCTGGCTGCCGCCACCCAGCTCTCGCGGCAGCA...TGGGACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp GGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCCTCTCTGGGGACTGCTaGCGCGAGAGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GFQSDSCSSDSRQRTSLSLSGDC*RESWVA
Trigger: CGCCACCCAGCTCTCGCGGCAGCAGTCCCCAGAGAG...GCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp GGCTGGGAAGTCCAAAGTCAAGGGCCCACATCTGGTGACGGCCTGAAGAAGTCTGGTCATGCAGAAGCTTaGTACCCGCCAGCATGCTGC +
Preference number: 4 (lower is better)
Translates to: GWEVQSQGPTSGDGLKKSGHAEA*YPPACC
Trigger: GCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACC...AGACTTCTTCAGGCCGTCACCAGATGTGGGCCCTTGACTTTGGACTTCCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR CCA 90 bp ACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATCACCGCCGCTCACACTaGCAGCAGCGCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: TAGKELPSAISEASYLHHHRRSH*QQRWLT
Trigger: TGTGAGCCAGCGCTGCTGCCAGTGTGAGCGGCGGTG...ATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCACCGCCGCTCACACTaGCAGCAGCGCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: SLSYLGGLIPPSCEESTSHRRSH*QQRWLT
Trigger: TGTGAGCCAGCGCTGCTGCCAGTGTGAGCGGCGGTG...ACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp AGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCGTTCGCGCCCCTCATaGCAGCGTAGACGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SRQVSNQIAAPLTAGKELRSRPS*QRRRSG
Trigger: CCCCGAGCGTCTACGCTGCCATGAGGGGCGCGAACG...AAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp AGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCGAAAACAGGTCTCTCTaGGGACTGCTGCCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SCSSDSRQRTSLSYLGGLENRSL*GLLPRE
Trigger: CTCTCGCGGCAGCAGTCCCCAGAGAGACCTGTTTTC...GAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp GGAGGCTGGGAAGTCCAAAGTCAAGGGCCCACATCTGGTGACGGCCTGAAGAAGTTCTTGCCCGCCTGCTaGATCGCCAAATTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GGWEVQSQGPTSGDGLKKFLPAC*IAKFPS
Trigger: AGAGGGAAATTTGGCGATTCAGCAGGCGGGCAAGAA...CTTCTTCAGGCCGTCACCAGATGTGGGCCCTTGACTTTGGACTTCCCAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR GCA 90 bp TTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCGGTCTCTCTGGGGACTaGTGCCGCGAGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LASYHRTKSAGFQSDSCSGLSGD*CRESWV
Trigger: CACCCAGCTCTCGCGGCAGCAGTCCCCAGAGAGACC...GGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp AGCTGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTGGTCTCTCTGGGGACTaGTGCCGCGAGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SCQRLTLLASYHRTKSAGGLSGD*CRESWV
Trigger: CACCCAGCTCTCGCGGCAGCAGTCCCCAGAGAGACC...ACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp GGCTGGGAAGTCCAAAGTCAAGGGCCCACATCTGGTGACGGCCTGAAGAAGTCTTGGCACTCATGTTCTTaGCCGCCTGCTGAATCGCCA +
Preference number: 4 (lower is better)
Translates to: GWEVQSQGPTSGDGLKKSWHSCS*PPAESP
Trigger: TGGCGATTCAGCAGGCGGGCAAGAACATGAGTGCCA...AGACTTCTTCAGGCCGTCACCAGATGTGGGCCCTTGACTTTGGACTTCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR GCA 90 bp CCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCTGAGGAGAGGGCACTaGTTGCAGACGACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PLTAGKELPSAISEASYLLRRGH*LQTTVS
Trigger: GCTGACTGTCGTCTGCAAGCAGTGCCCTCTCCTCAG...GAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TGCCCTCCAGAGTCCCCGTCCGTCTACACTTTTGTTGACACAAGGCCACGGTGGGAGAGAGGGGAGAAGTaGACTCAGGGCCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CPPESPSVYTFVDTRPRWERGEK*TQGLFS
Trigger: AGAAAAGAGGCCCTGAGTCCACTTCTCCCCTCTCTC...CCACCGTGGCCTTGTGTCAACAAAAGTGTAGACGGACGGGGACTCTGGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR GCA 90 bp GGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCCACAGAAGCGGCCAATaGGCTGGCCATTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: GFQSDSCSSDSRQRTSLSHRSGQ*AGHWHG
Trigger: GCCATGCCAATGGCCAGCGCATTGGCCGCTTCTGTG...GCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACACTCCAGGCCGGAAAGTaGCACAGAAGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: PITALSRQVSNQIAAPLTLQAGK*HRSGQC
Trigger: GCATTGGCCGCTTCTGTGGCACTTTCCGGCCTGGAG...TGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATCAGCAGCAGGCAGAGTaGCGCCCAGGCGTTCGCGCC +
Preference number: 4 (lower is better)
Translates to: LTLLASYHRTKSAGFQSDQQQAE*RPGVRA
Trigger: GGCGCGAACGCCTGGGCGCCACTCTGCCTGCTGCTG...ATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCAGCCGCGAGAGCTGGGTaGCGGCAGCCAGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FLVLNIMIKLFGMILPRPAARAG*RQPAAG
Trigger: GCCTGCTGCTGGCTGCCGCCACCCAGCTCTCGCGGC...TGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR TCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGACGCTTAGTTTCCCCTaGGGAGCTGCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEETLSFP*GAALAA
Trigger: GGCTGCCAGAGCAGCTCCTCAGGGGAAACTAAGCGT...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR GCA 90 bp TATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCCTGAGGAGAGGGCACTaGTTGCAGACGACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: YHRTKSAGFQSDSCSSDSLRRGH*LQTTVS
Trigger: GCTGACTGTCGTCTGCAAGCAGTGCCCTCTCCTCAG...GCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CAAAGTCAAGGGCCCACATCTGGTGACGGCCTGAAGAAGTCTTTCCGCTGGTCATCTTTCCGCTGGTCATaGAGAAGCTTGATACCCGCC +
Preference number: 4 (lower is better)
Translates to: QSQGPTSGDGLKKSFRWSSFRWS*RSLIPA
Trigger: GGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGA...TGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGGCCCTTGACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR CCA 90 bp ACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATAAGCGGCCAATGCGCTaGCCATTGGCATGGCCATTG +
Preference number: 4 (lower is better)
Translates to: TAGKELPSAISEASYLHHKRPMR*PLAWPL
Trigger: CAATGGCCATGCCAATGGCCAGCGCATTGGCCGCTT...ATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCTCATCTTGTTGCCACTaGACACAAGGGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSAISEASYLHHVKSQPVSSCCH*TQGLQA
Trigger: GGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGA...GACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp AGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCAGTCCTCCACAATACTaGTCCCCTCTTTCGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SCSSDSRQRTSLSYLGGLSPPQY*SPLSFG
Trigger: ACCAAACGAAAGAGGGGATCAGTATTGTGGAGGACT...GAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp TCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTTGTGCCACACACAAGTaGCTCCTGCAGGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SLSYLGGLIPPSCEESTSCATHK*LLQGNP
Trigger: GGGATTACCCTGCAGGAGTCACTTGTGTGTGGCACA...ACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp CCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCCGTCTACACTTTTGTTaGCACAAGGCCACGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSAISEASYLHHVKSQPVRLHFC*HKATVG
Trigger: ACCCACCGTGGCCTTGTGTCAACAAAAGTGTAGACG...GACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp GAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCTCGTCTACACTTTTGTTaGCACAAGGCCACGGTGGGT +
Preference number: 4 (lower is better)
Translates to: EEVFPLVMQKLDTRQHAARLHFC*HKATVG
Trigger: ACCCACCGTGGCCTTGTGTCAACAAAAGTGTAGACG...AGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR TCA 90 bp GGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCGCCACAGGCCACTGCTaGATATCCCGTTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFQSDSCSSDSRQRTSLSATGHC*ISRLFS
Trigger: GGAGAACAAACGGGATATTCAGCAGTGGCCTGTGGC...GCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR GCA 90 bp CCCACATCTGGTGACGGCCTGAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGCACTTGAACAATAATTaGCCTCCAGAGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PTSGDGLKKSFRWSCRSLHLNNN*PPESPS
Trigger: GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTG...CAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR GCA 90 bp TCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTATCGAGACTGTGGCGTaGAAACTCCCATCGCGAGTG +
Preference number: 4 (lower is better)
Translates to: SLSYLGGLIPPSCEESTSIETVA*KLPSRV
Trigger: CACTCGCGATGGGAGTTTGCACGCCACAGTCTCGAT...ACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp GCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCATCGAGACTGTGGCGTaGAAACTCCCATCGCGAGTG +
Preference number: 4 (lower is better)
Translates to: AGFQSDSCSSDSRQRTSLIETVA*KLPSRV
Trigger: CACTCGCGATGGGAGTTTGCACGCCACAGTCTCGAT...GAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp TCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCCCATGGCACTCATGTTCTTaGCCGCCTGCTGAATCGCCA +
Preference number: 4 (lower is better)
Translates to: SAISEASYLHHVKSQPVPWHSCS*PPAESP
Trigger: TGGCGATTCAGCAGGCGGGCAAGAACATGAGTGCCA...TGGGACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp AGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTGAAAACAGGTCTCTCTaGGGACTGCTGCCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SRQVSNQIAAPLTAGKELENRSL*GLLPRE
Trigger: CTCTCGCGGCAGCAGTCCCCAGAGAGACCTGTTTTC...AAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp GCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCGAATGCCACCACATGTaGAAACAGGTCTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGFQSDSCSSDSRQRTSLECHHM*KQVSLG
Trigger: CCCCAGAGAGACCTGTTTTCACATGTGGTGGCATTC...GAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp CCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGAATGCCACCACATGTaGAAACAGGTCTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PITALSRQVSNQIAAPLTECHHM*KQVSLG
Trigger: CCCCAGAGAGACCTGTTTTCACATGTGGTGGCATTC...TGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp AGCTGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTCGGAGAACATGGCCATaGAGCCATTGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SCQRLTLLASYHRTKSAGRRTWP*SHCQLC
Trigger: ACACAGCTGGCAATGGCTTCATGGCCATGTTCTCCG...ACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp CAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCCGGAGAACATGGCCATaGAGCCATTGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QSDSCSSDSRQRTSLSYLRRTWP*SHCQLC
Trigger: ACACAGCTGGCAATGGCTTCATGGCCATGTTCTCCG...GAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp TGCCGGCTAATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCTGTGCCACACACAAGTaGCTCCTGCAGGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: CRLIQSHLNNNCPPESPSCATHK*LLQGNP
Trigger: GGGATTACCCTGCAGGAGTCACTTGTGTGTGGCACA...GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTATTAGCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR TCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTGTGCCACACACAAGTaGCTCCTGCAGGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEECATHK*LLQGNP
Trigger: GGGATTACCCTGCAGGAGTCACTTGTGTGTGGCACA...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp TCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACTTCTTGCCCGCCTGCTaGATCGCCAAATTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SYHRTKSAGFQSDSCSSDFLPAC*IAKFPS
Trigger: AGAGGGAAATTTGGCGATTCAGCAGGCGGGCAAGAA...GTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCTCTCTGGGGACTGCTaGCGCGAGAGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LILGLEHHDKAVWHDFASLSGDC*RESWVA
Trigger: CGCCACCCAGCTCTCGCGGCAGCAGTCCCCAGAGAG...CGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp GATCGAGACTGTGGCGTGCAAACTCCCATCGCGAGTGATGGTTGTGATAACAGTGCACCATCATCTTGTTaGCACTGGACACAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: DRDCGVQTPIASDGCDNSAPSSC*HWTQGL
Trigger: GAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGC...ACTGTTATCACAACCATCACTCGCGATGGGAGTTTGCACGCCACAGTCTCGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR GCA 90 bp TCTTTCCGCTGGTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCTTGTAATTATCGAGACTGTGGCGTaGAAACTCCCATCGCGAGTG +
Preference number: 4 (lower is better)
Translates to: SFRWSCRSLIPASMLLVIIETVA*KLPSRV
Trigger: CACTCGCGATGGGAGTTTGCACGCCACAGTCTCGAT...AATTACAAGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR GCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTGGCACTCATGTTCTTaGCCGCCTGCTGAATCGCCA +
Preference number: 4 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEEWHSCS*PPAESP
Trigger: TGGCGATTCAGCAGGCGGGCAAGAACATGAGTGCCA...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp GTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCTTGTAATTCACCAATAGGACTGAGGAGAGGGCACTaGTTGCAGACGACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: VMQKLDTRQHAACNSPIGLRRGH*LQTTVS
Trigger: GCTGACTGTCGTCTGCAAGCAGTGCCCTCTCCTCAG...TCCTATTGGTGAATTACAAGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR CCA 90 bp CTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATGCTGCCGCGAGAGCTaGGTGGCGGCAGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSKAMAEYSLNGHSSLLTCCRES*VAAASS
Trigger: GCTGCTGGCTGCCGCCACCCAGCTCTCGCGGCAGCA...TGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp GCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCCGCTGGCCATTGGCATaGCCATTGTACACATCCACA +
Preference number: 4 (lower is better)
Translates to: AGFQSDSCSSDSRQRTSLRWPLA*PLYTST
Trigger: TGTGGATGTGTACAATGGCCATGCCAATGGCCAGCG...GAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCAAGCGGCCAATGCGCTaGCCATTGGCATGGCCATTG +
Preference number: 4 (lower is better)
Translates to: CQRLTLLASYHRTKSAGFKRPMR*PLAWPL
Trigger: CAATGGCCATGCCAATGGCCAGCGCATTGGCCGCTT...GAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp AGCTGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTCATCTTGTTGCCACTaGACACAAGGGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SCQRLTLLASYHRTKSAGSSCCH*TQGLQA
Trigger: GGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGA...ACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CCCACATCTGGTGACGGCCTGAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGTGGGTTTTAAACCCGTaGTTACAGGGAATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PTSGDGLKKSFRWSCRSLWVLNP*LQGMWW
Trigger: CCACCACATTCCCTGTAACCACGGGTTTAAAACCCA...CAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR CCA 90 bp AGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTAGACGACAGTCAGCCTaGCACTCATGTTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SRQVSNQIAAPLTAGKELRRQSA*HSCSCP
Trigger: CGGGCAAGAACATGAGTGCCAGGCTGACTGTCGTCT...AAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TCTTTCCGCTGGTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCTTGTAATTAGACGACAGTCAGCCTaGCACTCATGTTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SFRWSCRSLIPASMLLVIRRQSA*HSCSCP
Trigger: CGGGCAAGAACATGAGTGCCAGGCTGACTGTCGTCT...AATTACAAGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR CCA 90 bp AGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCCATGATAAAGCTGTTTaGCATGATTTTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SCSSDSRQRTSLSYLGGLHDKAV*HDFASP
Trigger: GGGCGAGGCAAAATCATGCCAAACAGCTTTATCATG...GAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CTGAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGATACCCGCCAGCATGCTGTACAGTTCTGGAGGCTaGGAAGTCCAAAGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LKKSFRWSCRSLIPASMLYSSGG*EVQSQG
Trigger: CCCTTGACTTTGGACTTCCCAGCCTCCAGAACTGTA...CAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR TCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGCGTCTACACTTTTGTTaGCACAAGGCCACGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEERLHFC*HKATVG
Trigger: ACCCACCGTGGCCTTGTGTCAACAAAAGTGTAGACG...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTTCTTGCCCGCCTGCTaGATCGCCAAATTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEEFLPAC*IAKFPS
Trigger: AGAGGGAAATTTGGCGATTCAGCAGGCGGGCAAGAA...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp CAAAGTCAAGGGCCCACATCTGGTGACGGCCTGAAGAAGTCTTTCCGCTGGTCAAGATTCTCCATCATGTaGAGAGTCAACCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: QSQGPTSGDGLKKSFRWSRFSIM*RVNQSH
Trigger: ATGGGACTGGTTGACTCTTCACATGATGGAGAATCT...TGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGGCCCTTGACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR GCA 90 bp TTAAGCATTGATTTAGAAAACGCAAGACAAGATTGTAACACCTCAGGGCAAAGGCTCTCTGGGGACTGCTaGCGCGAGAGCTGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LSIDLENARQDCNTSGQRLSGDC*RESWVA
Trigger: CGCCACCCAGCTCTCGCGGCAGCAGTCCCCAGAGAG...CCTTTGCCCTGAGGTGTTACAATCTTGTCTTGCGTTTTCTAAATCAATGCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295992.8
CDS-3UTR GCA 90 bp TTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATCACAGAAGCGGCCAATaGGCTGGCCATTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LTLLASYHRTKSAGFQSDHRSGQ*AGHWHG
Trigger: GCCATGCCAATGGCCAGCGCATTGGCCGCTTCTGTG...ATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATCCACAGAAGCGGCCAATaGGCTGGCCATTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LGLEHHDKAVWHDFASPIHRSGQ*AGHWHG
Trigger: GCCATGCCAATGGCCAGCGCATTGGCCGCTTCTGTG...GATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp CAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGCACCATCATCTTGTTaGCACTGGACACAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QSDSCSSDSRQRTSLSYLAPSSC*HWTQGL
Trigger: GAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGC...GAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAACACACAAGTGACTCCTaGAGGGTAATCCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QRLTLLASYHRTKSAGFQHTSDS*RVIPVW
Trigger: CCAGACCGGGATTACCCTGCAGGAGTCACTTGTGTG...TTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp TCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCCCACACTTGAACAATAATTaGCCTCCAGAGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SAISEASYLHHVKSQPVPHLNNN*PPESPS
Trigger: GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTG...TGGGACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp GAGCTTCTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTCAGCAGCAGGCAGAGTaGCGCCCAGGCGTTCGCGCC +
Preference number: 4 (lower is better)
Translates to: ELLILGLEHHDKAVWHDFQQQAE*RPGVRA
Trigger: GGCGCGAACGCCTGGGCGCCACTCTGCCTGCTGCTG...AAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp CCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACACAATGCGCTGGCCATTaGCATGGCCATTGTACACAT +
Preference number: 4 (lower is better)
Translates to: PITALSRQVSNQIAAPLTQCAGH*HGHCTH
Trigger: ATGTGTACAATGGCCATGCCAATGGCCAGCGCATTG...TGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCCCACAATGCGCTGGCCATTaGCATGGCCATTGTACACAT +
Preference number: 4 (lower is better)
Translates to: SAISEASYLHHVKSQPVPQCAGH*HGHCTH
Trigger: ATGTGTACAATGGCCATGCCAATGGCCAGCGCATTG...TGGGACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp GATCGAGACTGTGGCGTGCAAACTCCCATCGCGAGTGATGGTTGTGATAACAGTTCTCTCAGACACAATTaGCGCAGGTGGACTATCACC +
Preference number: 4 (lower is better)
Translates to: DRDCGVQTPIASDGCDNSSLRHN*RRWTIT
Trigger: GGTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGA...ACTGTTATCACAACCATCACTCGCGATGGGAGTTTGCACGCCACAGTCTCGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CCA 90 bp CCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGACACAAGGCCACGGTaGGTTTTAAACCCGTGGTTA +
Preference number: 4 (lower is better)
Translates to: PITALSRQVSNQIAAPLTDTRPR*VLNPWL
Trigger: TAACCACGGGTTTAAAACCCACCGTGGCCTTGTGTC...TGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CAAAGTCAAGGGCCCACATCTGGTGACGGCCTGAAGAAGTCTTTCCGCTGGTCACATGATAAAGCTGTTTaGCATGATTTTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: QSQGPTSGDGLKKSFRWSHDKAV*HDFASP
Trigger: GGGCGAGGCAAAATCATGCCAAACAGCTTTATCATG...TGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGGCCCTTGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470310.5
3UTR CAA 72 bp GGCCTGAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTaGATACCCGCCAGCATGCTGCTTGTAATTCACCAA +
Preference number: 4 (lower is better)
Translates to: GLKKSFRWSCRS*IPASMLLVIHQ
Trigger: TTGGTGAATTACAAGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR TCA 90 bp TTTAAACCCGTGGTTACAGGGAATGTGGTGGTGACAGGCTGTTCTGTAGTTGTACGGAGAACATGGCCATaGAGCCATTGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: FKPVVTGNVVVTGCSVVVRRTWP*SHCQLC
Trigger: ACACAGCTGGCAATGGCTTCATGGCCATGTTCTCCG...TACAACTACAGAACAGCCTGTCACCACCACATTCCCTGTAACCACGGGTTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR TCA 90 bp ACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATAGTCCTCCACAATACTaGTCCCCTCTTTCGTTTGGT +
Preference number: 4 (lower is better)
Translates to: TAGKELPSAISEASYLHHSPPQY*SPLSFG
Trigger: ACCAAACGAAAGAGGGGATCAGTATTGTGGAGGACT...ATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGAATTTAGACCTCTTCTaGGGAGAGGGCACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEENLDLF*GEGTAC
Trigger: GCAAGCAGTGCCCTCTCCTCAGAAGAGGTCTAAATT...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp CAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCAATTTAGACCTCTTCTaGGGAGAGGGCACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QSDSCSSDSRQRTSLSYLNLDLF*GEGTAC
Trigger: GCAAGCAGTGCCCTCTCCTCAGAAGAGGTCTAAATT...GAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp TCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACCATACCTCCATCATGTaGAGAGTCAACCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SYHRTKSAGFQSDSCSSDHTSIM*RVNQSH
Trigger: ATGGGACTGGTTGACTCTTCACATGATGGAGGTATG...GTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp TCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTTTTGGGGCTACAATGTaGCACACACAAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: SLSYLGGLIPPSCEESTSFGATM*HTQVTP
Trigger: AGGAGTCACTTGTGTGTGGCACATTGTAGCCCCAAA...ACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp TGCCGGCTAATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCCACTTGAACAATAATTaGCCTCCAGAGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: CRLIQSHLNNNCPPESPSHLNNN*PPESPS
Trigger: GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTG...GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTATTAGCCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR GCA 90 bp GACTTCCCCGCCATTAAACACAGCCACATAATCATATCGGCAGTAGTTATCTCGATCGAGACTGTGGCGTaGAAACTCCCATCGCGAGTG +
Preference number: 4 (lower is better)
Translates to: DFPAIKHSHIIISAVVISIETVA*KLPSRV
Trigger: CACTCGCGATGGGAGTTTGCACGCCACAGTCTCGAT...CGAGATAACTACTGCCGATATGATTATGTGGCTGTGTTTAATGGCGGGGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CCA 90 bp AGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTAGGGTAATCCCGGTCTaGCCAGTTGGGGGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: SRQVSNQIAAPLTAGKELRVIPV*PVGGFK
Trigger: TTTAAAACCCCCAACTGGCCAGACCGGGATTACCCT...AAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp TCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACTGGGTTTTAAACCCGTaGTTACAGGGAATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SYHRTKSAGFQSDSCSSDWVLNP*LQGMWW
Trigger: CCACCACATTCCCTGTAACCACGGGTTTAAAACCCA...GTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CGGCTAATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCGTCGACACAAGGCCACGGTaGGTTTTAAACCCGTGGTTA +
Preference number: 4 (lower is better)
Translates to: RLIQSHLNNNCPPESPSVDTRPR*VLNPWL
Trigger: TAACCACGGGTTTAAAACCCACCGTGGCCTTGTGTC...GACGGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTATTAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CCA 90 bp GGCCTGAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGATACCCGCCAGCATGAAGAAGTCTTTCCGCTaGTCATGCAGAAGCTTGATA +
Preference number: 4 (lower is better)
Translates to: GLKKSFRWSCRSLIPASMKKSFR*SCRSLI
Trigger: TATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTT...CATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR TCA 90 bp CTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATCCGGAGAACATGGCCATaGAGCCATTGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LGLEHHDKAVWHDFASPIRRTWP*SHCQLC
Trigger: ACACAGCTGGCAATGGCTTCATGGCCATGTTCTCCG...GATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR TCA 90 bp ATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCGTCTACACTCGTCTACACTTTTGTTaGCACAAGGCCACGGTGGGT +
Preference number: 4 (lower is better)
Translates to: IQSHLNNNCPPESPSVYTRLHFC*HKATVG
Trigger: ACCCACCGTGGCCTTGTGTCAACAAAAGTGTAGACG...AGTGTAGACGGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR TCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGGCATCCAGGAGCTTCTaGTTCTTGGTCTTGAACATC +
Preference number: 4 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEEASRSF*FLVLNI
Trigger: GATGTTCAAGACCAAGAATCAGAAGCTCCTGGATGC...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp TTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCCATACCTCCATCATGTaGAGAGTCAACCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LASYHRTKSAGFQSDSCSHTSIM*RVNQSH
Trigger: ATGGGACTGGTTGACTCTTCACATGATGGAGGTATG...GGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp GAGCTTCTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGGTCTCTCTGGGGACTaGTGCCGCGAGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ELLILGLEHHDKAVWHDFGLSGD*CRESWV
Trigger: CACCCAGCTCTCGCGGCAGCAGTCCCCAGAGAGACC...AAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp TCATTTCTCTCAGACACAATTGGCGCAGGTGGACTATCACCACAATACTTTCCACACACAAGTGACTCCTaGAGGGTAATCCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SFLSDTIGAGGLSPQYFPHTSDS*RVIPVW
Trigger: CCAGACCGGGATTACCCTGCAGGAGTCACTTGTGTG...TGGAAAGTATTGTGGTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR GCA 90 bp TTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTTTGGGGCTACAATGTaGCACACACAAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: LASYHRTKSAGFQSDSCSFGATM*HTQVTP
Trigger: AGGAGTCACTTGTGTGTGGCACATTGTAGCCCCAAA...GGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTTCCAATCAGATAGCTaGTCCTCTGACAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEEFQSDS*SSDSRQ
Trigger: TTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAA...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp GGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCCATTGCCAGCTGTGTTaGCATCAGAAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: GFQSDSCSSDSRQRTSLSHCQLC*HQKSSA
Trigger: TGCAGATGATTTCTGATGCCAACACAGCTGGCAATG...GCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACACATTGCCAGCTGTGTTaGCATCAGAAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: PITALSRQVSNQIAAPLTHCQLC*HQKSSA
Trigger: TGCAGATGATTTCTGATGCCAACACAGCTGGCAATG...TGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCATCCCCTCTTTCGTTTaGTTCAGCAGCGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: QSDSCSSDSRQRTSLSYLIPSFV*FSSGEH
Trigger: ATGTTCTCCGCTGCTGAACCAAACGAAAGAGGGGAT...GAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGATCCCCTCTTTCGTTTaGTTCAGCAGCGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEEIPSFV*FSSGEH
Trigger: ATGTTCTCCGCTGCTGAACCAAACGAAAGAGGGGAT...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCTATAAGCTGATTCTTTaGGGCTACAATGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: PSAISEASYLHHVKSQPVYKLIL*GYNVPH
Trigger: GTGTGGCACATTGTAGCCCCAAAGAATCAGCTTATA...GACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp GGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCCACAATTGGCGCAGGTaGACTATCACCACAATACTT +
Preference number: 4 (lower is better)
Translates to: GFQSDSCSSDSRQRTSLSHNWRR*TITTIL
Trigger: AAGTATTGTGGTGATAGTCCACCTGCGCCAATTGTG...GCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp GAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCTTATTTCTTACAGTTCTaGAGGCTGGGAAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: EEVFPLVMQKLDTRQHAAYFLQF*RLGSPK
Trigger: CTTTGGACTTCCCAGCCTCCAGAACTGTAAGAAATA...AGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR TCA 90 bp TCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACTTCCTTCGGGAACTGTaGTTTTCCAAGTACATTTGC +
Preference number: 4 (lower is better)
Translates to: SYHRTKSAGFQSDSCSSDFLREL*FSKYIC
Trigger: GCAAATGTACTTGGAAAATCACAGTTCCCGAAGGAA...GTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATCGCACCATCATCTTGTTaGCACTGGACACAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGLEHHDKAVWHDFASPIAPSSC*HWTQGL
Trigger: GAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGC...GATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp TTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATGGCACTCATGTTCTTaGCCGCCTGCTGAATCGCCA +
Preference number: 4 (lower is better)
Translates to: FLVLNIMIKLFGMILPRPWHSCS*PPAESP
Trigger: TGGCGATTCAGCAGGCGGGCAAGAACATGAGTGCCA...TGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp CCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCAGTACATTTGCTATTTaGAGGGTACACTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PSAISEASYLHHVKSQPVSTFAI*RVHSRK
Trigger: TTTCCTGGAGTGTACCCTCCAAATAGCAAATGTACT...GACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp ATAAGAAGTTCATTTCTCTCAGACACAATTGGCGCAGGTGGACTATCACCACAATCATCTTGTTGCCACTaGACACAAGGGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: IRSSFLSDTIGAGGLSPQSSCCH*TQGLQA
Trigger: GGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGA...TTGTGGTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGAAATGAACTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CCA 90 bp TTTAAACCCGTGGTTACAGGGAATGTGGTGGTGACAGGCTGTTCTGTAGTTGTAAGGGTAATCCCGGTCTaGCCAGTTGGGGGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: FKPVVTGNVVVTGCSVVVRVIPV*PVGGFK
Trigger: TTTAAAACCCCCAACTGGCCAGACCGGGATTACCCT...TACAACTACAGAACAGCCTGTCACCACCACATTCCCTGTAACCACGGGTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CCA 90 bp TCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACTATAAGCTGATTCTTTaGGGCTACAATGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: SYHRTKSAGFQSDSCSSDYKLIL*GYNVPH
Trigger: GTGTGGCACATTGTAGCCCCAAAGAATCAGCTTATA...GTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp CGCCAGCATGCTGCTTGTAATTCACCAATAGGAGATTCTCCATCATGTGAAGAGGACACAAGGCCACGGTaGGTTTTAAACCCGTGGTTA +
Preference number: 4 (lower is better)
Translates to: RQHAACNSPIGDSPSCEEDTRPR*VLNPWL
Trigger: TAACCACGGGTTTAAAACCCACCGTGGCCTTGTGTC...CTCTTCACATGATGGAGAATCTCCTATTGGTGAATTACAAGCAGCATGCTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR GCA 90 bp TTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTCTCCAGGCCGGAAAGTaGCACAGAAGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: FKGNGRIQLKWTQFTVNILQAGK*HRSGQC
Trigger: GCATTGGCCGCTTCTGTGGCACTTTCCGGCCTGGAG...AATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp GAGCTTCTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTCTCCAGGCCGGAAAGTaGCACAGAAGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: ELLILGLEHHDKAVWHDFLQAGK*HRSGQC
Trigger: GCATTGGCCGCTTCTGTGGCACTTTCCGGCCTGGAG...AAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp TGCCGGCTAATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCGCATCAGAAATCATCTaGACCATCATCTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: CRLIQSHLNNNCPPESPSASEII*TIILLP
Trigger: TGGCAACAAGATGATGGTGCAGATGATTTCTGATGC...GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTATTAGCCGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR GCA 90 bp CTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCACACAAGTGACTCCTaGAGGGTAATCCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LILGLEHHDKAVWHDFASHTSDS*RVIPVW
Trigger: CCAGACCGGGATTACCCTGCAGGAGTCACTTGTGTG...CGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp AGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTGACAGTGAAGGCAAATaGAAGCAGAACAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: SRQVSNQIAAPLTAGKELDSEGK*KQNKVT
Trigger: AGTGACTTTGTTCTGCTTGCATTTGCCTTCACTGTC...AAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR CCA 90 bp TCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACGAAAACAGGTCTCTCTaGGGACTGCTGCCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SFKGNGRIQLKWTQFTVNENRSL*GLLPRE
Trigger: CTCTCGCGGCAGCAGTCCCCAGAGAGACCTGTTTTC...GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp TATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGTACATTTGCTATTTaGAGGGTACACTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: YHRTKSAGFQSDSCSSDSSTFAI*RVHSRK
Trigger: TTTCCTGGAGTGTACCCTCCAAATAGCAAATGTACT...GCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp GATCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAAAGCGGCCAATGCGCTaGCCATTGGCATGGCCATTG +
Preference number: 4 (lower is better)
Translates to: DLSKAMAEYSLNGHSSLLKRPMR*PLAWPL
Trigger: CAATGGCCATGCCAATGGCCAGCGCATTGGCCGCTT...TAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp CACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCGTCTACACTTTTGTTGACCATTGCCAGCTGTGTTaGCATCAGAAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: HLNNNCPPESPSVYTFVDHCQLC*HQKSSA
Trigger: TGCAGATGATTTCTGATGCCAACACAGCTGGCAATG...GTCAACAAAAGTGTAGACGGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CCA 90 bp CTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATCAGGGTAATCCCGGTCTaGCCAGTTGGGGGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LGLEHHDKAVWHDFASPIRVIPV*PVGGFK
Trigger: TTTAAAACCCCCAACTGGCCAGACCGGGATTACCCT...GATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp CTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGAGACGACAGTCAGCCTaGCACTCATGTTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: LILGLEHHDKAVWHDFASRRQSA*HSCSCP
Trigger: CGGGCAAGAACATGAGTGCCAGGCTGACTGTCGTCT...CGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp TGCCGGCTAATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCTTTTCCTCTTTCGTTTaGTTCAGCAGCGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: CRLIQSHLNNNCPPESPSFSSFV*FSSGEH
Trigger: ATGTTCTCCGCTGCTGAACCAAACGAAAGAGGAAAA...GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTATTAGCCGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR TCA 90 bp TCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGTGTGCCACACACAAGTaGCTCCTGCAGGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SKAMAEYSLNGHSSLLTLCATHK*LLQGNP
Trigger: GGGATTACCCTGCAGGAGTCACTTGTGTGTGGCACA...CAATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp TGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCGCATCAGAAATCATCTaGACCATCATCTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: CQRLTLLASYHRTKSAGFASEII*TIILLP
Trigger: TGGCAACAAGATGATGGTGCAGATGATTTCTGATGC...GAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp GATCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTACACACAAGTGACTCCTaGAGGGTAATCCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DLSKAMAEYSLNGHSSLLHTSDS*RVIPVW
Trigger: CCAGACCGGGATTACCCTGCAGGAGTCACTTGTGTG...TAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp TCCAATTCTTCTAGCATCGTTGACTTCCCCGCCATTAAACACAGCCACATAATCTTTGGGGCTACAATGTaGCACACACAAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: SNSSSIVDFPAIKHSHIIFGATM*HTQVTP
Trigger: AGGAGTCACTTGTGTGTGGCACATTGTAGCCCCAAA...GATTATGTGGCTGTGTTTAATGGCGGGGAAGTCAACGATGCTAGAAGAATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR GCA 90 bp TTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTCTGAGGAGAGGGCACTaGTTGCAGACGACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: FKGNGRIQLKWTQFTVNILRRGH*LQTTVS
Trigger: GCTGACTGTCGTCTGCAAGCAGTGCCCTCTCCTCAG...AATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp TCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACTCATCTTGTTGCCACTaGACACAAGGGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SFKGNGRIQLKWTQFTVNSSCCH*TQGLQA
Trigger: GGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGA...GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp ATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCGTCTACACTCACAATTGGCGCAGGTaGACTATCACCACAATACTT +
Preference number: 4 (lower is better)
Translates to: IQSHLNNNCPPESPSVYTHNWRR*TITTIL
Trigger: AAGTATTGTGGTGATAGTCCACCTGCGCCAATTGTG...AGTGTAGACGGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CCA 90 bp TCCAATTCTTCTAGCATCGTTGACTTCCCCGCCATTAAACACAGCCACATAATCTGGGTTTTAAACCCGTaGTTACAGGGAATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SNSSSIVDFPAIKHSHIIWVLNP*LQGMWW
Trigger: CCACCACATTCCCTGTAACCACGGGTTTAAAACCCA...GATTATGTGGCTGTGTTTAATGGCGGGGAAGTCAACGATGCTAGAAGAATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CCA 90 bp TCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACAGACGACAGTCAGCCTaGCACTCATGTTCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SFKGNGRIQLKWTQFTVNRRQSA*HSCSCP
Trigger: CGGGCAAGAACATGAGTGCCAGGCTGACTGTCGTCT...GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp GAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCTAGAATACAGCTTAAATaGACACAGTTCACTGTTAAC +
Preference number: 4 (lower is better)
Translates to: EEVFPLVMQKLDTRQHAARIQLK*TQFTVN
Trigger: GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCT...AGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR TCA 90 bp TCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACGAATGCCACCACATGTaGAAACAGGTCTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SFKGNGRIQLKWTQFTVNECHHM*KQVSLG
Trigger: CCCCAGAGAGACCTGTTTTCACATGTGGTGGCATTC...GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR TCA 90 bp TCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACTTCTTGCCCGCCTGCTaGATCGCCAAATTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SFKGNGRIQLKWTQFTVNFLPAC*IAKFPS
Trigger: AGAGGGAAATTTGGCGATTCAGCAGGCGGGCAAGAA...GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp TTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTTTTCCAAGTACATTTaGTATTTGGAGGGTACACTC +
Preference number: 4 (lower is better)
Translates to: LASYHRTKSAGFQSDSCSFSKYI*YLEGTL
Trigger: GAGTGTACCCTCCAAATAGCAAATGTACTTGGAAAA...GGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACAGCACCATCATCTTGTTaGCACTGGACACAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSKAMAEYSLNGHSSLLTAPSSC*HWTQGL
Trigger: GAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGC...TGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp GAGCTTCTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTATCGAGACTGTGGCGTaGAAACTCCCATCGCGAGTG +
Preference number: 4 (lower is better)
Translates to: ELLILGLEHHDKAVWHDFIETVA*KLPSRV
Trigger: CACTCGCGATGGGAGTTTGCACGCCACAGTCTCGAT...AAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp CTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACACGCTGGCCATTGGCATaGCCATTGTACACATCCACA +
Preference number: 4 (lower is better)
Translates to: LSKAMAEYSLNGHSSLLTRWPLA*PLYTST
Trigger: TGTGGATGTGTACAATGGCCATGCCAATGGCCAGCG...TGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp CTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCAATGCGCTGGCCATTaGCATGGCCATTGTACACAT +
Preference number: 4 (lower is better)
Translates to: LILGLEHHDKAVWHDFASQCAGH*HGHCTH
Trigger: ATGTGTACAATGGCCATGCCAATGGCCAGCGCATTG...CGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp CTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATCCATTGCCAGCTGTGTTaGCATCAGAAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: LGLEHHDKAVWHDFASPIHCQLC*HQKSSA
Trigger: TGCAGATGATTTCTGATGCCAACACAGCTGGCAATG...GATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR TCA 90 bp GATCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAAATTTAGACCTCTTCTaGGGAGAGGGCACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: DLSKAMAEYSLNGHSSLLNLDLF*GEGTAC
Trigger: GCAAGCAGTGCCCTCTCCTCAGAAGAGGTCTAAATT...TAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp GAGCTTCTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTCGCTGGCCATTGGCATaGCCATTGTACACATCCACA +
Preference number: 4 (lower is better)
Translates to: ELLILGLEHHDKAVWHDFRWPLA*PLYTST
Trigger: TGTGGATGTGTACAATGGCCATGCCAATGGCCAGCG...AAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp CTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACAAGGGTAATCCCGGTCTaGCCAGTTGGGGGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LSKAMAEYSLNGHSSLLTRVIPV*PVGGFK
Trigger: TTTAAAACCCCCAACTGGCCAGACCGGGATTACCCT...TGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp TCCAATTCTTCTAGCATCGTTGACTTCCCCGCCATTAAACACAGCCACATAATCTATAAGCTGATTCTTTaGGGCTACAATGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: SNSSSIVDFPAIKHSHIIYKLIL*GYNVPH
Trigger: GTGTGGCACATTGTAGCCCCAAAGAATCAGCTTATA...GATTATGTGGCTGTGTTTAATGGCGGGGAAGTCAACGATGCTAGAAGAATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CCA 90 bp CTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATCTATAAGCTGATTCTTTaGGGCTACAATGTGCCACAC +
Preference number: 4 (lower is better)
Translates to: LGLEHHDKAVWHDFASPIYKLIL*GYNVPH
Trigger: GTGTGGCACATTGTAGCCCCAAAGAATCAGCTTATA...GATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp TTAAGCATTGATTTAGAAAACGCAAGACAAGATTGTAACACCTCAGGGCAAAGGTCTCTCAGACACAATTaGCGCAGGTGGACTATCACC +
Preference number: 4 (lower is better)
Translates to: LSIDLENARQDCNTSGQRSLRHN*RRWTIT
Trigger: GGTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGA...CCTTTGCCCTGAGGTGTTACAATCTTGTCTTGCGTTTTCTAAATCAATGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295992.8
CDS-3UTR CCA 90 bp TCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACTCTCTCAGACACAATTaGCGCAGGTGGACTATCACC +
Preference number: 4 (lower is better)
Translates to: SFKGNGRIQLKWTQFTVNSLRHN*RRWTIT
Trigger: GGTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGA...GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR CCA 90 bp AGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTAGAATACAGCTTAAATaGACACAGTTCACTGTTAAC +
Preference number: 4 (lower is better)
Translates to: SRQVSNQIAAPLTAGKELRIQLK*TQFTVN
Trigger: GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCT...AAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR TCA 90 bp CTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACAAGTCCTCCACAATACTaGTCCCCTCTTTCGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LSKAMAEYSLNGHSSLLTSPPQY*SPLSFG
Trigger: ACCAAACGAAAGAGGGGATCAGTATTGTGGAGGACT...TGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR TCA 90 bp TCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGGCATCCAGGAGCTTCTaGTTCTTGGTCTTGAACATC +
Preference number: 4 (lower is better)
Translates to: SKAMAEYSLNGHSSLLTLASRSF*FLVLNI
Trigger: GATGTTCAAGACCAAGAATCAGAAGCTCCTGGATGC...CAATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp TTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCAGCATCAGAAATCATCTaGACCATCATCTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: FLVLNIMIKLFGMILPRPASEII*TIILLP
Trigger: TGGCAACAAGATGATGGTGCAGATGATTTCTGATGC...TGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp TTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTCACTTGAACAATAATTaGCCTCCAGAGTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: FKGNGRIQLKWTQFTVNIHLNNN*PPESPS
Trigger: GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTG...AATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR GCA 90 bp GATCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTATTCCAATCAGATAGCTaGTCCTCTGACAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: DLSKAMAEYSLNGHSSLLFQSDS*SSDSRQ
Trigger: TTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAA...TAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR CCA 90 bp GGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGCTTATATCCCCTCTTTCGTTTaGTTCAGCAGCGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: GNGRIQLKWTQFTVNIAYIPSFV*FSSGEH
Trigger: ATGTTCTCCGCTGCTGAACCAAACGAAAGAGGGGAT...ATAAGCAATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp GGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGCTTATTGGGTTTTAAACCCGTaGTTACAGGGAATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GNGRIQLKWTQFTVNIAYWVLNP*LQGMWW
Trigger: CCACCACATTCCCTGTAACCACGGGTTTAAAACCCA...ATAAGCAATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR CCA 90 bp TTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGACACAAGGCCACGGTaGGTTTTAAACCCGTGGTTA +
Preference number: 4 (lower is better)
Translates to: FKGNGRIQLKWTQFTVNIDTRPR*VLNPWL
Trigger: TAACCACGGGTTTAAAACCCACCGTGGCCTTGTGTC...AATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR TCA 90 bp CTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGTTCCTTCGGGAACTGTaGTTTTCCAAGTACATTTGC +
Preference number: 4 (lower is better)
Translates to: LILGLEHHDKAVWHDFASFLREL*FSKYIC
Trigger: GCAAATGTACTTGGAAAATCACAGTTCCCGAAGGAA...CGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR TCA 90 bp GTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATATGTAATTTTATAAGTAATTTAGACCTCTTCTaGGGAGAGGGCACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: VNQSHLSESSFRICNFISNLDLF*GEGTAC
Trigger: GCAAGCAGTGCCCTCTCCTCAGAAGAGGTCTAAATT...ACTTATAAAATTACATATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295992.8
ENST00000470310.5
ENST00000648195.1
CDS-3UTR TCA 90 bp TTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGCATCCAGGAGCTTCTaGTTCTTGGTCTTGAACATC +
Preference number: 4 (lower is better)
Translates to: FKGNGRIQLKWTQFTVNIASRSF*FLVLNI
Trigger: GATGTTCAAGACCAAGAATCAGAAGCTCCTGGATGC...AATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp CTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATCTTTTCCAAGTACATTTaGTATTTGGAGGGTACACTC +
Preference number: 4 (lower is better)
Translates to: LGLEHHDKAVWHDFASPIFSKYI*YLEGTL
Trigger: GAGTGTACCCTCCAAATAGCAAATGTACTTGGAAAA...GATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp GAGCTTCTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTTTTGGGGCTACAATGTaGCACACACAAGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: ELLILGLEHHDKAVWHDFFGATM*HTQVTP
Trigger: AGGAGTCACTTGTGTGTGGCACATTGTAGCCCCAAA...AAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp TCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACCATGATAAAGCTGTTTaGCATGATTTTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SFKGNGRIQLKWTQFTVNHDKAV*HDFASP
Trigger: GGGCGAGGCAAAATCATGCCAAACAGCTTTATCATG...GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR TCA 90 bp GTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATATGTAATTTTATAAGTGCATCCAGGAGCTTCTaGTTCTTGGTCTTGAACATC +
Preference number: 4 (lower is better)
Translates to: VNQSHLSESSFRICNFISASRSF*FLVLNI
Trigger: GATGTTCAAGACCAAGAATCAGAAGCTCCTGGATGC...ACTTATAAAATTACATATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295992.8
ENST00000470310.5
ENST00000648195.1
CDS-3UTR TCA 90 bp CTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACACAGAACAAAGTCACTTaGACAATAATTGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSKAMAEYSLNGHSSLLTQNKVT*TIIALQ
Trigger: CTGGAGGGCAATTATTGTTCAAGTGACTTTGTTCTG...TGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR CCA 90 bp GAGCTTCTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTCATGATAAAGCTGTTTaGCATGATTTTGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: ELLILGLEHHDKAVWHDFHDKAV*HDFASP
Trigger: GGGCGAGGCAAAATCATGCCAAACAGCTTTATCATG...AAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp TTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTCCGGCTAATAGCAGGTaGACTATCACCACAATACTT +
Preference number: 4 (lower is better)
Translates to: FKGNGRIQLKWTQFTVNIPANSR*TITTIL
Trigger: AAGTATTGTGGTGATAGTCCACCTGCTATTAGCCGG...AATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485766.1
CDS-3UTR CCA 90 bp TCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACAGTACATTTGCTATTTaGAGGGTACACTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SFKGNGRIQLKWTQFTVNSTFAI*RVHSRK
Trigger: TTTCCTGGAGTGTACCCTCCAAATAGCAAATGTACT...GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp GTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATATGTAATTTTATAAGTCACAATTGGCGCAGGTaGACTATCACCACAATACTT +
Preference number: 4 (lower is better)
Translates to: VNQSHLSESSFRICNFISHNWRR*TITTIL
Trigger: AAGTATTGTGGTGATAGTCCACCTGCGCCAATTGTG...ACTTATAAAATTACATATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR GCA 90 bp CTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTTTCCAAGTACATTTaGTATTTGGAGGGTACACTC +
Preference number: 4 (lower is better)
Translates to: LSKAMAEYSLNGHSSLLTFSKYI*YLEGTL
Trigger: GAGTGTACCCTCCAAATAGCAAATGTACTTGGAAAA...TGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR GCA 90 bp AGAGTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATATGTAATTTTATAGCATCAGAAATCATCTaGACCATCATCTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: RVNQSHLSESSFRICNFIASEII*TIILLP
Trigger: TGGCAACAAGATGATGGTGCAGATGATTTCTGATGC...TATAAAATTACATATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CCA 90 bp GGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGCTTATAGAATACAGCTTAAATaGACACAGTTCACTGTTAAC +
Preference number: 4 (lower is better)
Translates to: GNGRIQLKWTQFTVNIAYRIQLK*TQFTVN
Trigger: GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCT...ATAAGCAATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CCA 90 bp GAGCTTCTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTAGAATACAGCTTAAATaGACACAGTTCACTGTTAAC +
Preference number: 4 (lower is better)
Translates to: ELLILGLEHHDKAVWHDFRIQLK*TQFTVN
Trigger: GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCT...AAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS CCA 90 bp ACACACGCCCCTCCGCACCCACCGCGCTCACACCGCCGCTCACACTaGCAGCAGCGCTGGCTCACACCGGCGCTCGGCTGCCCGCGCGCT +
Preference number: 5 (lower is better)
Translates to: THAPPHPPRSHRRSH*QQRWLTPALGCPRA
Trigger: AGCGCGCGGGCAGCCGAGCGCCGGTGTGAGCCAGCGCTGCTGCCAGTGTGAGCGGCGGTGTGAGCGCGGTGGGTGCGGAGGGGCGTGTGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295992.8
ENST00000495732.5
ENST00000648195.1
CDS-3UTR CAA 90 bp AGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCGTAGACGCTCGGGGTTaGCACCCCACGGCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: SCSSDSRQRTSLSYLGGLVDARG*HPTARA
Trigger: CGCGCGCGCCGTGGGGTGCAAACCCCGAGCGTCTAC...GAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCCCAGTAGACGCTCGGGGTTaGCACCCCACGGCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: SAISEASYLHHVKSQPVPVDARG*HPTARA
Trigger: CGCGCGCGCCGTGGGGTGCAAACCCCGAGCGTCTAC...TGGGACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS GCA 90 bp CCATCATCTTGTTGCCACTGGACACAAGGGCTCCAGGCCGGAAAGTaGCACAGAAGCGGCCAATGCGCTGGCCATTGGCATGGCCATTGT +
Preference number: 5 (lower is better)
Translates to: PSSCCHWTQGLQAGK*HRSGQCAGHWHGHC
Trigger: ACAATGGCCATGCCAATGGCCAGCGCATTGGCCGCTTCTGTGGCACTTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CCA 90 bp CTCCAGGCCGGAAAGTGCCACAGAAGCGGCCAATGCGCTGGCCATTaGCATGGCCATTGTACACATCCACAAAGTCATAGCGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: LQAGKCHRSGQCAGH*HGHCTHPQSHSGTG
Trigger: ACCTGTGCCGCTATGACTTTGTGGATGTGTACAATGGCCATGCCAATGGCCAGCGCATTGGCCGCTTCTGTGGCACTTTCCGGCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS-3UTR CAA 90 bp CCCACATCTGGTGACGGCCTGAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGAGGAGAGGGCACTGCTaGCAGACGACAGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PTSGDGLKKSFRWSCRSLRRGHC*QTTVSL
Trigger: CAGGCTGACTGTCGTCTGCAAGCAGTGCCCTCTCCT...CAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAGGCCGTCACCAGATGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS GCA 90 bp TGGACACAAGGGCTCCAGGCCGGAAAGTGCCACAGAAGCGGCCAATaGGCTGGCCATTGGCATGGCCATTGTACACATCCACAAAGTCAT +
Preference number: 5 (lower is better)
Translates to: WTQGLQAGKCHRSGQ*AGHWHGHCTHPQSH
Trigger: ATGACTTTGTGGATGTGTACAATGGCCATGCCAATGGCCAGCGCATTGGCCGCTTCTGTGGCACTTTCCGGCCTGGAGCCCTTGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS-3UTR CAA 90 bp AGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCCCGTCTACACTTTTGTaGACACAAGGCCACGGTGGG +
Preference number: 5 (lower is better)
Translates to: SCSSDSRQRTSLSYLGGLPSTLL*TQGHGG
Trigger: CCCACCGTGGCCTTGTGTCAACAAAAGTGTAGACGG...GAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS GCA 90 bp TGCCAGCTGTGTTGGCATCAGAAATCATCTGCACCATCATCTTGTTaGCACTGGACACAAGGGCTCCAGGCCGGAAAGTGCCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: CQLCWHQKSSAPSSC*HWTQGLQAGKCHRS
Trigger: GCTTCTGTGGCACTTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGATGATTTCTGATGCCAACACAGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS GCA 90 bp ATGGCCATGAAGCCATTGCCAGCTGTGTTGGCATCAGAAATCATCTaGACCATCATCTTGTTGCCACTGGACACAAGGGCTCCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: MAMKPLPAVLASEII*TIILLPLDTRAPGR
Trigger: CCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGATGATTTCTGATGCCAACACAGCTGGCAATGGCTTCATGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000480473.5
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CCA 90 bp CTGTGTTGGCATCAGAAATCATCTGCACCATCATCTTGTTGCCACTaGACACAAGGGCTCCAGGCCGGAAAGTGCCACAGAAGCGGCCAA +
Preference number: 5 (lower is better)
Translates to: LCWHQKSSAPSSCCH*TQGLQAGKCHRSGQ
Trigger: TTGGCCGCTTCTGTGGCACTTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGATGATTTCTGATGCCAACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS-3UTR CAA 90 bp CTGAAGAAGTCTTTCCGCTGGTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCCGTCTACACTTTTGTaGACACAAGGCCACGGTGGG +
Preference number: 5 (lower is better)
Translates to: LKKSFRWSCRSLIPASMLPSTLL*TQGHGG
Trigger: CCCACCGTGGCCTTGTGTCAACAAAAGTGTAGACGG...CAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGACTTCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR CAA 90 bp AGCTGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTAGGAGAGGGCACTGCTaGCAGACGACAGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SCQRLTLLASYHRTKSAGRRGHC*QTTVSL
Trigger: CAGGCTGACTGTCGTCTGCAAGCAGTGCCCTCTCCT...ACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp CCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCGATCCCCTCTTTCGTTaGGTTCAGCAGCGGAGAACA +
Preference number: 5 (lower is better)
Translates to: PSAISEASYLHHVKSQPVDPLFR*VQQRRT
Trigger: TGTTCTCCGCTGCTGAACCAAACGAAAGAGGGGATC...GACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp CCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCTTCTCTCAGACACAATaGGCGCAGGTGGACTATCAC +
Preference number: 5 (lower is better)
Translates to: PLTAGKELPSAISEASYLFSQTQ*AQVDYH
Trigger: GTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGAA...GAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCCGTCTACACTTTTGTaGACACAAGGCCACGGTGGG +
Preference number: 5 (lower is better)
Translates to: SLSYLGGLIPPSCEESTSPSTLL*TQGHGG
Trigger: CCCACCGTGGCCTTGTGTCAACAAAAGTGTAGACGG...ACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp CAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAAAGGAGAGGGCACTGCTaGCAGACGACAGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: QRLTLLASYHRTKSAGFQRRGHC*QTTVSL
Trigger: CAGGCTGACTGTCGTCTGCAAGCAGTGCCCTCTCCT...TTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TGCCCTCCAGAGTCCCCGTCCGTCTACACTTTTGTTGACACAAGGCCACGGTGGTTTTTCCTCTTTCGTTaGGTTCAGCAGCGGAGAACA +
Preference number: 5 (lower is better)
Translates to: CPPESPSVYTFVDTRPRWFFLFR*VQQRRT
Trigger: TGTTCTCCGCTGCTGAACCAAACGAAAGAGGAAAAA...CCACCGTGGCCTTGTGTCAACAAAAGTGTAGACGGACGGGGACTCTGGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CAA 90 bp TTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCCCAATGCGCTGGCCATaGGCATGGCCATTGTACACA +
Preference number: 5 (lower is better)
Translates to: LASYHRTKSAGFQSDSCSPMRWP*AWPLYT
Trigger: TGTGTACAATGGCCATGCCAATGGCCAGCGCATTGG...GGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp GGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTGCACCATCATCTTGTaGCCACTGGACACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: GFQSDSCSSDSRQRTSLSCTIIL*PLDTRA
Trigger: AGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCA...GCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCCGTCCGTCTACACTTTaGTTGACACAAGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: YHRTKSAGFQSDSCSSDSRPSTL*LTQGHG
Trigger: ACCGTGGCCTTGTGTCAACAAAAGTGTAGACGGACG...GCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TCTTTCCGCTGGTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCTTGTAATTTGGTCATGCAGAAGCTaGATACCCGCCAGCATGCTG +
Preference number: 5 (lower is better)
Translates to: SFRWSCRSLIPASMLLVIWSCRS*IPASML
Trigger: CAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCA...AATTACAAGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGACCAGCGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS TCA 90 bp ACTGATCCCCTCTTTCGTTTGGTTCAGCAGCGGAGAACATGGCCATaGAGCCATTGCCAGCTGTGTTGGCATCAGAAATCATCTGCACCA +
Preference number: 5 (lower is better)
Translates to: TDPLFRLVQQRRTWP*SHCQLCWHQKSSAP
Trigger: TGGTGCAGATGATTTCTGATGCCAACACAGCTGGCAATGGCTTCATGGCCATGTTCTCCGCTGCTGAACCAAACGAAAGAGGGGATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000483986.1
ENST00000485766.1
ENST00000648195.1
CDS TCA 90 bp CCCATCTACCTCTTTCGTTTGGTTCAGCAGCGGAGAACATGGCCATaGAGCCATTGCCAGCTGTGTTGGCATCAGAAATCATCTGCACCA +
Preference number: 5 (lower is better)
Translates to: PIYLFRLVQQRRTWP*SHCQLCWHQKSSAP
Trigger: TGGTGCAGATGATTTCTGATGCCAACACAGCTGGCAATGGCTTCATGGCCATGTTCTCCGCTGCTGAACCAAACGAAAGAGGTAGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495732.5
CDS-3UTR CAA 90 bp TGCCGGCTAATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCTGCACCATCATCTTGTaGCCACTGGACACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: CRLIQSHLNNNCPPESPSCTIIL*PLDTRA
Trigger: AGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCA...GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTATTAGCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CAA 90 bp TCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTATCTGCACCATCATCTaGTTGCCACTGGACACAAGG +
Preference number: 5 (lower is better)
Translates to: SLSYLGGLIPPSCEESTSICTII*LPLDTR
Trigger: CCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGAT...ACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCCCATTGCCAGCTGTGTaGGCATCAGAAATCATCTGC +
Preference number: 5 (lower is better)
Translates to: YHRTKSAGFQSDSCSSDSPLPAV*ASEIIC
Trigger: GCAGATGATTTCTGATGCCAACACAGCTGGCAATGG...GCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGCGTCCGTCTACACTTTaGTTGACACAAGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEERPSTL*LTQGHG
Trigger: ACCGTGGCCTTGTGTCAACAAAAGTGTAGACGGACG...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp ACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATCTGTTTGGCATGATTTaGCCTCGCCCATCTTCACCT +
Preference number: 5 (lower is better)
Translates to: TAGKELPSAISEASYLHHLFGMI*PRPSSP
Trigger: AGGTGAAGATGGGCGAGGCAAAATCATGCCAAACAG...ATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS TCA 90 bp AAGACTGGGGAGCGTCTCAGAAAGAACTTACTAGTCCAGACTGCGTaGAACTGGCACAGATGGCTTGAAAGTTATAGCAGGGTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: KTGERLRKNLLVQTA*NWHRWLESYSRVGV
Trigger: TACCCCCACCCTGCTATAACTTTCAAGCCATCTGTGCCAGTTTCACGCAGTCTGGACTAGTAAGTTCTTTCTGAGACGCTCCCCAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461818.5
CDS-3UTR CAA 90 bp TATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCCCATTGGCATGGCCATaGTACACATCCACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: YHRTKSAGFQSDSCSSDSPLAWP*YTSTKS
Trigger: TGACTTTGTGGATGTGTACAATGGCCATGCCAATGG...GCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACCCATTGGCATGGCCATaGTACACATCCACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SYHRTKSAGFQSDSCSSDPLAWP*YTSTKS
Trigger: TGACTTTGTGGATGTGTACAATGGCCATGCCAATGG...GTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCATCTGCACCATCATCTaGTTGCCACTGGACACAAGG +
Preference number: 5 (lower is better)
Translates to: SNQIAAPLTAGKELPSAIICTII*LPLDTR
Trigger: CCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGAT...GATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TGCCGGCTAATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCCCATTGCCAGCTGTGTaGGCATCAGAAATCATCTGC +
Preference number: 5 (lower is better)
Translates to: CRLIQSHLNNNCPPESPSPLPAV*ASEIIC
Trigger: GCAGATGATTTCTGATGCCAACACAGCTGGCAATGG...GGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTATTAGCCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CAA 90 bp ATACAAAGTCACTTGAACAATAATTGCCCTCCAGAGTCCCCGTCCGTCTACACTCCGTCTACACTTTTGTaGACACAAGGCCACGGTGGG +
Preference number: 5 (lower is better)
Translates to: IQSHLNNNCPPESPSVYTPSTLL*TQGHGG
Trigger: CCCACCGTGGCCTTGTGTCAACAAAAGTGTAGACGG...AGTGTAGACGGACGGGGACTCTGGAGGGCAATTATTGTTCAAGTGACTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CAA 90 bp TGCAAACTCCCATCGCGAGTGATGGTTGTGATAACAGTGCCGGCTAATACAAAGCGTCCGTCTACACTTTaGTTGACACAAGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: CKLPSRVMVVITVPANTKRPSTL*LTQGHG
Trigger: ACCGTGGCCTTGTGTCAACAAAAGTGTAGACGGACG...CTTTGTATTAGCCGGCACTGTTATCACAACCATCACTCGCGATGGGAGTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CAA 90 bp AGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTCTGTTTGGCATGATTTaGCCTCGCCCATCTTCACCT +
Preference number: 5 (lower is better)
Translates to: SRQVSNQIAAPLTAGKELLFGMI*PRPSSP
Trigger: AGGTGAAGATGGGCGAGGCAAAATCATGCCAAACAG...AAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp CCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGTCAACCAGTCCCAAGCTGTCAACGCTaGACACTTTTAGCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: PSAISEASYLHHVKSQPVPSCQR*TLLASY
Trigger: ATAGGAAGCTAAAAGTGTCAAGCGTTGACAGCTTGG...GACTGGTTGACTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp AGCTGCTCCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATTTTCCAAGTACATTaGCTATTTGGAGGGTACACT +
Preference number: 5 (lower is better)
Translates to: SCSSDSRQRTSLSYLGGLIFQVH*LFGGYT
Trigger: AGTGTACCCTCCAAATAGCAAATGTACTTGGAAAAT...GAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGGAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp CCTCTGACAGCAGGCAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCCCATCTTCACCTACTaGGCCCATAATAATGTAATT +
Preference number: 5 (lower is better)
Translates to: PLTAGKELPSAISEASYLPIFTY*AHNNVI
Trigger: AATTACATTATTATGGGCCAAGTAGGTGAAGATGGG...GAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTGCCTGCTGTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp GTCATGCAGAAGCTTGATACCCGCCAGCATGCTGCTTGTAATTCACCAATAGGACTGTTTGGCATGATTTaGCCTCGCCCATCTTCACCT +
Preference number: 5 (lower is better)
Translates to: VMQKLDTRQHAACNSPIGLFGMI*PRPSSP
Trigger: AGGTGAAGATGGGCGAGGCAAAATCATGCCAAACAG...TCCTATTGGTGAATTACAAGCAGCATGCTGGCGGGTATCAAGCTTCTGCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR CAA 90 bp TCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGAGGAGAGGGCACTGCTaGCAGACGACAGTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SKAMAEYSLNGHSSLLTLRRGHC*QTTVSL
Trigger: CAGGCTGACTGTCGTCTGCAAGCAGTGCCCTCTCCT...CAATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp CAAAGAACTTCCCTCAGCTATCTCGGAGGCCTCATACCTCCATCATGTGAAGAGCCTCAGGGCAAAGGCTaGAAGGTGAAACAAATAACA +
Preference number: 5 (lower is better)
Translates to: QRTSLSYLGGLIPPSCEEPQGKG*KVKQIT
Trigger: TGTTATTTGTTTCACCTTCAAGCCTTTGCCCTGAGG...CTCTTCACATGATGGAGGTATGAGGCCTCCGAGATAGCTGAGGGAAGTTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCCCTCAGGGCAAAGGCTaGAAGGTGAAACAAATAACA +
Preference number: 5 (lower is better)
Translates to: LASYHRTKSAGFQSDSCSPQGKG*KVKQIT
Trigger: TGTTATTTGTTTCACCTTCAAGCCTTTGCCCTGAGG...GGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp AGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCAGGCAAAGAACTTAAGTACATTTGCTATTaGGAGGGTACACTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: SRQVSNQIAAPLTAGKELKYICY*EGTLQE
Trigger: TTCCTGGAGTGTACCCTCCAAATAGCAAATGTACTT...AAGTTCTTTGCCTGCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp CTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCAATGCGCTGGCCATaGGCATGGCCATTGTACACA +
Preference number: 5 (lower is better)
Translates to: LILGLEHHDKAVWHDFASPMRWP*AWPLYT
Trigger: TGTGTACAATGGCCATGCCAATGGCCAGCGCATTGG...CGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp TCCAATTCTTCTAGCATCGTTGACTTCCCCGCCATTAAACACAGCCACATAATCATCTGCACCATCATCTaGTTGCCACTGGACACAAGG +
Preference number: 5 (lower is better)
Translates to: SNSSSIVDFPAIKHSHIIICTII*LPLDTR
Trigger: CCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGAT...GATTATGTGGCTGTGTTTAATGGCGGGGAAGTCAACGATGCTAGAAGAATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CAA 90 bp TGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCATTCTTCTAGCATCGTaGACTTCCCCGCCATTAAAC +
Preference number: 5 (lower is better)
Translates to: CQRLTLLASYHRTKSAGFILLAS*TSPPLN
Trigger: GTTTAATGGCGGGGAAGTCAACGATGCTAGAAGAAT...GAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TGCAAACTCCCATCGCGAGTGATGGTTGTGATAACAGTGCCGGCTAATACAAAGATTCTTCTAGCATCGTaGACTTCCCCGCCATTAAAC +
Preference number: 5 (lower is better)
Translates to: CKLPSRVMVVITVPANTKILLAS*TSPPLN
Trigger: GTTTAATGGCGGGGAAGTCAACGATGCTAGAAGAAT...CTTTGTATTAGCCGGCACTGTTATCACAACCATCACTCGCGATGGGAGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS-3UTR CAA 90 bp TATCACCGCACTAAGTCGGCAGGTTTCCAATCAGATAGCTGCTCCTCTGACAGCATTTTCCAAGTACATTaGCTATTTGGAGGGTACACT +
Preference number: 5 (lower is better)
Translates to: YHRTKSAGFQSDSCSSDSIFQVH*LFGGYT
Trigger: AGTGTACCCTCCAAATAGCAAATGTACTTGGAAAAT...GCTGTCAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp CTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACACCAATGCGCTGGCCATaGGCATGGCCATTGTACACA +
Preference number: 5 (lower is better)
Translates to: LSKAMAEYSLNGHSSLLTPMRWP*AWPLYT
Trigger: TGTGTACAATGGCCATGCCAATGGCCAGCGCATTGG...TGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp TTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCAATCTGCACCATCATCTaGTTGCCACTGGACACAAGG +
Preference number: 5 (lower is better)
Translates to: FLVLNIMIKLFGMILPRPICTII*LPLDTR
Trigger: CCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGAT...TGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp ATAAGAAGTTCATTTCTCTCAGACACAATTGGCGCAGGTGGACTATCACCACAATTCTCTCAGACACAATaGGCGCAGGTGGACTATCAC +
Preference number: 5 (lower is better)
Translates to: IRSSFLSDTIGAGGLSPQFSQTQ*AQVDYH
Trigger: GTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGAA...TTGTGGTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGAAATGAACTTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480473.5
CDS CCA 90 bp CAGGAGCTTCTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTaGCATGATTTTGCCTCGCCCATCTTCACCTACTTGGCCCATAAT +
Preference number: 5 (lower is better)
Translates to: QELLILGLEHHDKAV*HDFASPIFTYLAHN
Trigger: ATTATGGGCCAAGTAGGTGAAGATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000470310.5
ENST00000470795.5
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp TTAAGCATTGATTTAGAAAACGCAAGACAAGATTGTAACACCTCAGGGCAAAGGTGCACCATCATCTTGTaGCCACTGGACACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: LSIDLENARQDCNTSGQRCTIIL*PLDTRA
Trigger: AGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCA...CCTTTGCCCTGAGGTGTTACAATCTTGTCTTGCGTTTTCTAAATCAATGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295992.8
CDS-3UTR CAA 90 bp GGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGCTTATTGCACCATCATCTTGTaGCCACTGGACACAAGGGCT +
Preference number: 5 (lower is better)
Translates to: GNGRIQLKWTQFTVNIAYCTIIL*PLDTRA
Trigger: AGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCA...ATAAGCAATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp TCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACGATCCCCTCTTTCGTTaGGTTCAGCAGCGGAGAACA +
Preference number: 5 (lower is better)
Translates to: SFKGNGRIQLKWTQFTVNDPLFR*VQQRRT
Trigger: TGTTCTCCGCTGCTGAACCAAACGAAAGAGGGGATC...GTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp CTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATCATTCTTCTAGCATCGTaGACTTCCCCGCCATTAAAC +
Preference number: 5 (lower is better)
Translates to: LGLEHHDKAVWHDFASPIILLAS*TSPPLN
Trigger: GTTTAATGGCGGGGAAGTCAACGATGCTAGAAGAAT...GATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp TGTCAACGCTTGACACTTTTAGCTTCCTATCACCGCACTAAGTCGGCAGGTTTCCCCATCTTCACCTACTaGGCCCATAATAATGTAATT +
Preference number: 5 (lower is better)
Translates to: CQRLTLLASYHRTKSAGFPIFTY*AHNNVI
Trigger: AATTACATTATTATGGGCCAAGTAGGTGAAGATGGG...GAAACCTGCCGACTTAGTGCGGTGATAGGAAGCTAAAAGTGTCAAGCGTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS TCA 90 bp TTCTCACTTGGCCACAAGTTTCAGGCCAGGGTCCTGGTAGTTCCTTaGTATTTCAGACCCAGTTCAGGTCAGAGTTTTTCAATCATAAAA +
Preference number: 5 (lower is better)
Translates to: FSLGHKFQARVLVVP*YFRPSSGQSFSIIK
Trigger: TTTTATGATTGAAAAACTCTGACCTGAACTGGGTCTGAAATATCAAGGAACTACCAGGACCCTGGCCTGAAACTTGTGGCCAAGTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461818.5
ENST00000493733.1
CDS CCA 90 bp CTTCGAATGCCATATAGAGCAGTTCTGCTTTTATCATTTCTCACTTaGCCACAAGTTTCAGGCCAGGGTCCTGGTAGTTCCTTGATATTT +
Preference number: 5 (lower is better)
Translates to: LRMPYRAVLLLSFLT*PQVSGQGPGSSLIF
Trigger: AAATATCAAGGAACTACCAGGACCCTGGCCTGAAACTTGTGGCCAAGTGAGAAATGATAAAAGCAGAACTGCTCTATATGGCATTCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461818.5
ENST00000493733.1
CDS-3UTR CAA 90 bp CTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACACCATTGCCAGCTGTGTaGGCATCAGAAATCATCTGC +
Preference number: 5 (lower is better)
Translates to: LSKAMAEYSLNGHSSLLTPLPAV*ASEIIC
Trigger: GCAGATGATTTCTGATGCCAACACAGCTGGCAATGG...TGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp GATCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTACCATTGCCAGCTGTGTaGGCATCAGAAATCATCTGC +
Preference number: 5 (lower is better)
Translates to: DLSKAMAEYSLNGHSSLLPLPAV*ASEIIC
Trigger: GCAGATGATTTCTGATGCCAACACAGCTGGCAATGG...TAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp TTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCAATTCTTCTAGCATCGTaGACTTCCCCGCCATTAAAC +
Preference number: 5 (lower is better)
Translates to: FLVLNIMIKLFGMILPRPILLAS*TSPPLN
Trigger: GTTTAATGGCGGGGAAGTCAACGATGCTAGAAGAAT...TGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp CGCCAGCATGCTGCTTGTAATTCACCAATAGGAGATTCTCCATCATGTGAAGAGCCCATCTTCACCTACTaGGCCCATAATAATGTAATT +
Preference number: 5 (lower is better)
Translates to: RQHAACNSPIGDSPSCEEPIFTY*AHNNVI
Trigger: AATTACATTATTATGGGCCAAGTAGGTGAAGATGGG...CTCTTCACATGATGGAGAATCTCCTATTGGTGAATTACAAGCAGCATGCTGGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470310.5
CDS-3UTR CAA 90 bp GATCTTTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTACCATTGGCATGGCCATaGTACACATCCACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: DLSKAMAEYSLNGHSSLLPLAWP*YTSTKS
Trigger: TGACTTTGTGGATGTGTACAATGGCCATGCCAATGG...TAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp GTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATATGTAATTTTATAAGTGATCCCCTCTTTCGTTaGGTTCAGCAGCGGAGAACA +
Preference number: 5 (lower is better)
Translates to: VNQSHLSESSFRICNFISDPLFR*VQQRRT
Trigger: TGTTCTCCGCTGCTGAACCAAACGAAAGAGGGGATC...ACTTATAAAATTACATATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp GTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATATGTAATTTTATAAGTCGTCCGTCTACACTTTaGTTGACACAAGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: VNQSHLSESSFRICNFISRPSTL*LTQGHG
Trigger: ACCGTGGCCTTGTGTCAACAAAAGTGTAGACGGACG...ACTTATAAAATTACATATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295992.8
ENST00000470310.5
ENST00000648195.1
CDS-3UTR CAA 90 bp CTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCCATCCCCATCTTCACCTACTaGGCCCATAATAATGTAATT +
Preference number: 5 (lower is better)
Translates to: LGLEHHDKAVWHDFASPIPIFTY*AHNNVI
Trigger: AATTACATTATTATGGGCCAAGTAGGTGAAGATGGG...GATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp TTCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTCTGTTTGGCATGATTTaGCCTCGCCCATCTTCACCT +
Preference number: 5 (lower is better)
Translates to: FKGNGRIQLKWTQFTVNILFGMI*PRPSSP
Trigger: AGGTGAAGATGGGCGAGGCAAAATCATGCCAAACAG...AATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp CTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGCCAAGCTGTCAACGCTaGACACTTTTAGCTTCCTAT +
Preference number: 5 (lower is better)
Translates to: LILGLEHHDKAVWHDFASPSCQR*TLLASY
Trigger: ATAGGAAGCTAAAAGTGTCAAGCGTTGACAGCTTGG...CGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS-3UTR CAA 90 bp GTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATATGTAATTTTATAAGTTTCTCTCAGACACAATaGGCGCAGGTGGACTATCAC +
Preference number: 5 (lower is better)
Translates to: VNQSHLSESSFRICNFISFSQTQ*AQVDYH
Trigger: GTGATAGTCCACCTGCGCCAATTGTGTCTGAGAGAA...ACTTATAAAATTACATATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295992.8
ENST00000648195.1
CDS-3UTR CAA 90 bp TTAAGCATTGATTTAGAAAACGCAAGACAAGATTGTAACACCTCAGGGCAAAGGAAGTACATTTGCTATTaGGAGGGTACACTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: LSIDLENARQDCNTSGQRKYICY*EGTLQE
Trigger: TTCCTGGAGTGTACCCTCCAAATAGCAAATGTACTT...CCTTTGCCCTGAGGTGTTACAATCTTGTCTTGCGTTTTCTAAATCAATGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295992.8
CDS-3UTR CAA 90 bp TCAAAGGCAATGGCAGAATACAGCTTAAATGGACACAGTTCACTGTTAACATTGAAGTACATTTGCTATTaGGAGGGTACACTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: SKAMAEYSLNGHSSLLTLKYICY*EGTLQE
Trigger: TTCCTGGAGTGTACCCTCCAAATAGCAAATGTACTT...CAATGTTAACAGTGAACTGTGTCCATTTAAGCTGTATTCTGCCATTGCCTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp CTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTTGCCTCGATTTTCCAAGTACATTaGCTATTTGGAGGGTACACT +
Preference number: 5 (lower is better)
Translates to: LILGLEHHDKAVWHDFASIFQVH*LFGGYT
Trigger: AGTGTACCCTCCAAATAGCAAATGTACTTGGAAAAT...CGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485766.1
ENST00000648195.1
CDS-3UTR CAA 90 bp AGAGTCAACCAGTCCCATCTTTCGGAATCCTCTTTCAGAATATGTAATTTTATAGCAGAACAAAGTCACTaGAACAATAATTGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: RVNQSHLSESSFRICNFIAEQSH*NNNCPP
Trigger: TGGAGGGCAATTATTGTTCAAGTGACTTTGTTCTGC...TATAAAATTACATATTCTGAAAGAGGATTCCGAAAGATGGGACTGGTTGACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648195.1
CDS GCA 72 bp CACTGGCAGCAGCGCTGGCTCACACCGGCGCTCGGCTaGCCGCGCGCTCCCTCTCACGCGCGCACCGCCGCG +
Preference number: 6 (lower is better)
Translates to: HWQQRWLTPALG*PRAPSHARTAA
Trigger: CGCGGCGGTGCGCGCGTGAGAGGGAGCGCGCGGGCAGCCGAGCGCCGGTGTGAGCCAGCGCTGCTGCCAGTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295992.8
ENST00000495732.5
ENST00000648195.1
CDS CCA 72 bp CCTCCGCACCCACCGCGCTCACACCGCCGCTCACACTaGCAGCAGCGCTGGCTCACACCGGCGCTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: PPHPPRSHRRSH*QQRWLTPALGC
Trigger: GCAGCCGAGCGCCGGTGTGAGCCAGCGCTGCTGCCAGTGTGAGCGGCGGTGTGAGCGCGGTGGGTGCGGAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295992.8
ENST00000495732.5
ENST00000648195.1
CDS CCA 72 bp GACGCCTGCACCGCGCGGGAGCGCAGGGTCGAGCGCTaGGTCACCCAGGCGCGCCGAAGCGGGTTGAGTAAA +
Preference number: 6 (lower is better)
Translates to: DACTARERRVER*VTQARRSGLSK
Trigger: TTTACTCAACCCGCTTCGGCGCGCCTGGGTGACCCAGCGCTCGACCCTGCGCTCCCGCGCGGTGCAGGCGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493733.1
CDS GCA 72 bp CCACATGTGAAAACAGGTCCGAGGGTGGCGGACGCCTaGACCGCGCGGGAGCGCAGGGTCGAGCGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: PHVKTGPRVADA*TARERRVERWV
Trigger: GACCCAGCGCTCGACCCTGCGCTCCCGCGCGGTGCAGGCGTCCGCCACCCTCGGACCTGTTTTCACATGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493733.1
CDS CCA 72 bp AAAACAGGTCTCTCTGGGGACTGCTGCCGCGAGAGCTaGGTGGCGGCAGCCAGCAGCAGGCAGAGTGGCGCC +
Preference number: 6 (lower is better)
Translates to: KTGLSGDCCRES*VAAASSRQSGA
Trigger: GGCGCCACTCTGCCTGCTGCTGGCTGCCGCCACCCAGCTCTCGCGGCAGCAGTCCCCAGAGAGACCTGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295992.8
ENST00000461818.5
ENST00000483454.1
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS GCA 72 bp GGGCTCCAGGCCGGAAAGTGCCACAGAAGCGGCCAATaGGCTGGCCATTGGCATGGCCATTGTACACATCCA +
Preference number: 6 (lower is better)
Translates to: GLQAGKCHRSGQ*AGHWHGHCTHP
Trigger: TGGATGTGTACAATGGCCATGCCAATGGCCAGCGCATTGGCCGCTTCTGTGGCACTTTCCGGCCTGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS GCA 72 bp TGTTGCCACTGGACACAAGGGCTCCAGGCCGGAAAGTaGCACAGAAGCGGCCAATGCGCTGGCCATTGGCAT +
Preference number: 6 (lower is better)
Translates to: CCHWTQGLQAGK*HRSGQCAGHWH
Trigger: ATGCCAATGGCCAGCGCATTGGCCGCTTCTGTGGCACTTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CCA 72 bp CCAGGCCGGAAAGTGCCACAGAAGCGGCCAATGCGCTaGCCATTGGCATGGCCATTGTACACATCCACAAAG +
Preference number: 6 (lower is better)
Translates to: PGRKVPQKRPMR*PLAWPLYTSTK
Trigger: CTTTGTGGATGTGTACAATGGCCATGCCAATGGCCAGCGCATTGGCCGCTTCTGTGGCACTTTCCGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS TCA 72 bp GCTGATTCTTTGGGGCTACAATGTGCCACACACAAGTaGCTCCTGCAGGGTAATCCCGGTCTGGCCAGTTGG +
Preference number: 6 (lower is better)
Translates to: ADSLGLQCATHK*LLQGNPGLASW
Trigger: CCAACTGGCCAGACCGGGATTACCCTGCAGGAGTCACTTGTGTGTGGCACATTGTAGCCCCAAAGAATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000480473.5
ENST00000483986.1
ENST00000485766.1
ENST00000648195.1
CDS GCA 72 bp CTTTGGGGCTACAATGTGCCACACACAAGTGACTCCTaGAGGGTAATCCCGGTCTGGCCAGTTGGGGGTTTT +
Preference number: 6 (lower is better)
Translates to: LWGYNVPHTSDS*RVIPVWPVGGF
Trigger: AAAACCCCCAACTGGCCAGACCGGGATTACCCTGCAGGAGTCACTTGTGTGTGGCACATTGTAGCCCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000480473.5
ENST00000483986.1
ENST00000485766.1
ENST00000648195.1
CDS CAA 90 bp CCATTGCCAGCTGTGTTGGCATCAGAAATCATCTGCACCATCATCTaGTTGCCACTGGACACAAGGGCTCCAGGCCGGAAAGTGCCACAG +
Preference number: 6 (lower is better)
Translates to: PLPAVLASEIICTII*LPLDTRAPGRKVPQ
Trigger: CTGTGGCACTTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGATGATTTCTGATGCCAACACAGCTGGCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS GCA 72 bp GCTTGCAGACGACAGTCAGCCTGGCACTCATGTTCTTaGCCGCCTGCTGAATCGCCAAATTTCCCTCTTTGT +
Preference number: 6 (lower is better)
Translates to: ACRRQSAWHSCS*PPAESPNFPLC
Trigger: ACAAAGAGGGAAATTTGGCGATTCAGCAGGCGGGCAAGAACATGAGTGCCAGGCTGACTGTCGTCTGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000470310.5
ENST00000470795.5
ENST00000485766.1
ENST00000648195.1
CDS CCA 72 bp GGAAAGTGCCACAGAAGCGGCCAATGCGCTGGCCATTaGCATGGCCATTGTACACATCCACAAAGTCATAGC +
Preference number: 6 (lower is better)
Translates to: GKCHRSGQCAGH*HGHCTHPQSHS
Trigger: GCTATGACTTTGTGGATGTGTACAATGGCCATGCCAATGGCCAGCGCATTGGCCGCTTCTGTGGCACTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CAA 90 bp TTGCCAGCTGTGTTGGCATCAGAAATCATCTGCACCATCATCTTGTaGCCACTGGACACAAGGGCTCCAGGCCGGAAAGTGCCACAGAAG +
Preference number: 6 (lower is better)
Translates to: LPAVLASEIICTIIL*PLDTRAPGRKVPQK
Trigger: CTTCTGTGGCACTTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGATGATTTCTGATGCCAACACAGCTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS GCA 72 bp TGTTGGCATCAGAAATCATCTGCACCATCATCTTGTTaGCACTGGACACAAGGGCTCCAGGCCGGAAAGTGC +
Preference number: 6 (lower is better)
Translates to: CWHQKSSAPSSC*HWTQGLQAGKC
Trigger: GCACTTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGATGATTTCTGATGCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000480473.5
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CCA 72 bp CATCAGAAATCATCTGCACCATCATCTTGTTGCCACTaGACACAAGGGCTCCAGGCCGGAAAGTGCCACAGA +
Preference number: 6 (lower is better)
Translates to: HQKSSAPSSCCH*TQGLQAGKCHR
Trigger: TCTGTGGCACTTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGATGATTTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CAA 72 bp GTGTTGGCATCAGAAATCATCTGCACCATCATCTTGTaGCCACTGGACACAAGGGCTCCAGGCCGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: VLASEIICTIIL*PLDTRAPGRKV
Trigger: CACTTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGATGATTTCTGATGCCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000480473.5
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CAA 72 bp GCTGTGTTGGCATCAGAAATCATCTGCACCATCATCTaGTTGCCACTGGACACAAGGGCTCCAGGCCGGAAA +
Preference number: 6 (lower is better)
Translates to: AVLASEIICTII*LPLDTRAPGRK
Trigger: TTTCCGGCCTGGAGCCCTTGTGTCCAGTGGCAACAAGATGATGGTGCAGATGATTTCTGATGCCAACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000480473.5
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CAA 90 bp CCTCTTTCGTTTGGTTCAGCAGCGGAGAACATGGCCATGAAGCCATaGCCAGCTGTGTTGGCATCAGAAATCATCTGCACCATCATCTTG +
Preference number: 6 (lower is better)
Translates to: PLSFGSAAENMAMKP*PAVLASEIICTIIL
Trigger: CAAGATGATGGTGCAGATGATTTCTGATGCCAACACAGCTGGCAATGGCTTCATGGCCATGTTCTCCGCTGCTGAACCAAACGAAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295992.8
ENST00000480473.5
ENST00000483986.1
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS TCA 72 bp CTCTTTCGTTTGGTTCAGCAGCGGAGAACATGGCCATaGAGCCATTGCCAGCTGTGTTGGCATCAGAAATCA +
Preference number: 6 (lower is better)
Translates to: LFRLVQQRRTWP*SHCQLCWHQKS
Trigger: TGATTTCTGATGCCAACACAGCTGGCAATGGCTTCATGGCCATGTTCTCCGCTGCTGAACCAAACGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295992.8
ENST00000480473.5
ENST00000483986.1
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CCA 72 bp TATAGCAGGGTGGGGGTAATTACGTTCAAACATGCCTaGTACTTCCTGCATGGCGACCTGGTATACTGCAAA +
Preference number: 6 (lower is better)
Translates to: YSRVGVITFKHA*YFLHGDLVYCK
Trigger: TTTGCAGTATACCAGGTCGCCATGCAGGAAGTACCAGGCATGTTTGAACGTAATTACCCCCACCCTGCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461818.5
ENST00000493733.1
CDS TCA 72 bp GAGCGTCTCAGAAAGAACTTACTAGTCCAGACTGCGTaGAACTGGCACAGATGGCTTGAAAGTTATAGCAGG +
Preference number: 6 (lower is better)
Translates to: ERLRKNLLVQTA*NWHRWLESYSR
Trigger: CCTGCTATAACTTTCAAGCCATCTGTGCCAGTTTCACGCAGTCTGGACTAGTAAGTTCTTTCTGAGACGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461818.5
CDS CCA 72 bp CGTTCAAACATGCCTGGTACTTCCTGCATGGCGACCTaGTATACTGCAAAGCTTAGGGTTATTCATAAAATG +
Preference number: 6 (lower is better)
Translates to: RSNMPGTSCMAT*YTAKLRVIHKM
Trigger: CATTTTATGAATAACCCTAAGCTTTGCAGTATACCAGGTCGCCATGCAGGAAGTACCAGGCATGTTTGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461818.5
ENST00000493733.1
CDS CAA 72 bp CACAGGTTGTCACTCTCGAGGTCTATGAATCGGAAATaGAGAACGACTACTTTTCCTTCGGGAACTGTGATT +
Preference number: 6 (lower is better)
Translates to: HRLSLSRSMNRK*RTTTFPSGTVI
Trigger: AATCACAGTTCCCGAAGGAAAAGTAGTCGTTCTCAATTTCCGATTCATAGACCTCGAGAGTGACAACCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295992.8
ENST00000485766.1
ENST00000495732.5
ENST00000648195.1
CDS CAA 90 bp TTTCTCACTTGGCCACAAGTTTCAGGCCAGGGTCCTGGTAGTTCCTaGATATTTCAGACCCAGTTCAGGTCAGAGTTTTTCAATCATAAA +
Preference number: 6 (lower is better)
Translates to: FLTWPQVSGQGPGSS*IFQTQFRSEFFNHK
Trigger: TTTATGATTGAAAAACTCTGACCTGAACTGGGTCTGAAATATCAAGGAACTACCAGGACCCTGGCCTGAAACTTGTGGCCAAGTGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461818.5
ENST00000493733.1
CDS CCA 72 bp CTGATTCTTGGTCTTGAACATCATGATAAAGCTGTTTaGCATGATTTTGCCTCGCCCATCTTCACCTACTTG +
Preference number: 6 (lower is better)
Translates to: LILGLEHHDKAV*HDFASPIFTYL
Trigger: CAAGTAGGTGAAGATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGACCAAGAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000470310.5
ENST00000470795.5
ENST00000485766.1
ENST00000648195.1
CDS CAA 72 bp GTCTTGAACATCATGATAAAGCTGTTTGGCATGATTTaGCCTCGCCCATCTTCACCTACTTGGCCCATAATA +
Preference number: 6 (lower is better)
Translates to: VLNIMIKLFGMI*PRPSSPTWPII
Trigger: TATTATGGGCCAAGTAGGTGAAGATGGGCGAGGCAAAATCATGCCAAACAGCTTTATCATGATGTTCAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295992.8
ENST00000470310.5
ENST00000470795.5
ENST00000485766.1
ENST00000648195.1
CDS CAA 90 bp TTCCCAATAGTTGGGGTAAATCCAACATTTCACTATTTCAGGCATTaGCCTCTTACTCAAATCCTAACACCAGAGGAAAAAGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: FPIVGVNPTFHYFRH*PLTQILTPEEKGSS
Trigger: GCTGCTGCCTTTTTCCTCTGGTGTTAGGATTTGAGTAAGAGGCAAATGCCTGAAATAGTGAAATGTTGGATTTACCCCAACTATTGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483454.1
CDS GCA 72 bp AAATTGAGAGTCTTCGAATGCCATATAGAGCAGTTCTaGTTTTATCATTTCTCACTTGGCCACAAGTTTCAG +
Preference number: 6 (lower is better)
Translates to: KLRVFECHIEQF*FYHFSLGHKFQ
Trigger: CTGAAACTTGTGGCCAAGTGAGAAATGATAAAAGCAGAACTGCTCTATATGGCATTCGAAGACTCTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461818.5
ENST00000493733.1
CDS CAA 72 bp GTTGGGGTAAATCCAACATTTCACTATTTCAGGCATTaGCCTCTTACTCAAATCCTAACACCAGAGGAAAAA +
Preference number: 6 (lower is better)
Translates to: VGVNPTFHYFRH*PLTQILTPEEK
Trigger: TTTTTCCTCTGGTGTTAGGATTTGAGTAAGAGGCAAATGCCTGAAATAGTGAAATGTTGGATTTACCCCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483454.1