RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCNX4 (Homo sapiens)

Ensembl gene IDs: ENSG00000126773

Ensembl transcript IDs: ENST00000317623.8, ENST00000391611.6, ENST00000406854.6, ENST00000406949.5, ENST00000483571.5, ENST00000553513.1, ENST00000554534.5, ENST00000555569.1, ENST00000555740.5, ENST00000555929.1, ENST00000556360.1, ENST00000556907.1

Found 962 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATAATTCTGTTTGGTTCCATACTCTGCCCACCAGGCCACTGGGGTaGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTG +
Preference number: 1 (lower is better)
Translates to: NNSVWFHTLPTRPLG*QVTASALGEGPASV
Trigger: CACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAGTGGCCTGGTGGGCAGAGTATGGAACCAAACAGAATTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR TCA 90 bp GGCTGGGAATTCCAAGACCAATGCACCAGCAGAATTAGTGTCTGGTaGAGGCTGATCTCTGCTTCCAAGATGGCACCTCATTGCTGCATC +
Preference number: 1 (lower is better)
Translates to: GWEFQDQCTSRISVW*RLISASKMAPHCCI
Trigger: GATGCAGCAATGAGGTGCCATCTTGGAAGCAGAGATCAGCCTTCACCAGACACTAATTCTGCTGGTGCATTGGTCTTGGAATTCCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 90 bp GATCTCTGCTTCCAAGATGGCACCTCATTGCTGCATCCTCCACAGTaGAGGAATGTATGTCCTCACATGGTGGAAGGGACAGAAGGGAAA +
Preference number: 1 (lower is better)
Translates to: DLCFQDGTSLLHPPQ*RNVCPHMVEGTEGK
Trigger: TTTCCCTTCTGTCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATGAGGTGCCATCTTGGAAGCAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 90 bp AATTCCAAGACCAATGCACCAGCAGAATTAGTGTCTGGTGAAGGCTaGTCTCTGCTTCCAAGATGGCACCTCATTGCTGCATCCTCCACA +
Preference number: 1 (lower is better)
Translates to: NSKTNAPAELVSGEG*SLLPRWHLIAASST
Trigger: TGTGGAGGATGCAGCAATGAGGTGCCATCTTGGAAGCAGAGATCAGCCTTCACCAGACACTAATTCTGCTGGTGCATTGGTCTTGGAATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR GCA 90 bp TTTGGCCACTTACATAGCCAAAATCCCATGAGTTTCTTATCAGGTTaGTCTGGGGGATATGGACGAGTGCAAAGGTGGGCAGGTGCACTT +
Preference number: 1 (lower is better)
Translates to: FGHLHSQNPMSFLSG*SGGYGRVQRWAGAL
Trigger: AAGTGCACCTGCCCACCTTTGCACTCGTCCATATCCCCCAGAGCAACCTGATAAGAAACTCATGGGATTTTGGCTATGTAAGTGGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 90 bp TATGCTATCTTCCTAGGTATTCCCTGGGATGTAGGAGACAGCTCTTaGAGACACATGGGGTTGGCTATCTGGCTTTTGGAGAGACTTTGT +
Preference number: 1 (lower is better)
Translates to: YAIFLGIPWDVGDSS*RHMGLAIWLLERLC
Trigger: ACAAAGTCTCTCCAAAAGCCAGATAGCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTACATCCCAGGGAATACCTAGGAAGATAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 90 bp CCTCATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATaGTGGAAGGGACAGAAGGGAAAGAGGAGCAAAATGCTTTCAAAA +
Preference number: 1 (lower is better)
Translates to: PHCCILHSGGMYVLT*WKGQKGKRSKMLSK
Trigger: TTTTGAAAGCATTTTGCTCCTCTTTCCCTTCTGTCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 90 bp TCTTCTTTGACTTGCAGGTGGCCACATTTTTGCTGTGTCCTTAGATaGCACAGAGAGGGACAAATCAAGCTCTCTGGTACCTCTTCTCAT +
Preference number: 1 (lower is better)
Translates to: SSLTCRWPHFCCVLR*HREGQIKLSGTSSH
Trigger: ATGAGAAGAGGTACCAGAGAGCTTGATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCAAAAATGTGGCCACCTGCAAGTCAAAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR TCA 90 bp GTACAATCCATCCTGAGGCAAAATTCCTCTCCAGCTGTGAATCTGTaGAACCAGATGAGTTACGTGCTTCCAAAATCTAAGGGTAGGGCA +
Preference number: 1 (lower is better)
Translates to: VQSILRQNSSPAVNL*NQMSYVLPKSKGRA
Trigger: TGCCCTACCCTTAGATTTTGGAAGCACGTAACTCATCTGGTTTCACAGATTCACAGCTGGAGAGGAATTTTGCCTCAGGATGGATTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CCA 90 bp AAGTGTTACTTAGCGTCTCAGACTCTCAACCACCTTATCCTGAATTaGCATGTCTCCTATAAGAAAAGCAGCCCAAATGCTGAGCTCAGG +
Preference number: 1 (lower is better)
Translates to: KCYLASQTLNHLILN*HVSYKKSSPNAELR
Trigger: CCTGAGCTCAGCATTTGGGCTGCTTTTCTTATAGGAGACATGCCAATTCAGGATAAGGTGGTTGAGAGTCTGAGACGCTAAGTAACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 90 bp ACAACATCAATTTACTTTCTCACACTTCTGAAGGCCGAAAGACCATaGTCAGGCTGCCAGTATGGTCAGGTTTTGATGAGAGCTCTCTTC +
Preference number: 1 (lower is better)
Translates to: TTSIYFLTLLKAERP*SGCQYGQVLMRALF
Trigger: GAAGAGAGCTCTCATCAAAACCTGACCATACTGGCAGCCTGATCATGGTCTTTCGGCCTTCAGAAGTGTGAGAAAGTAAATTGATGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR GCA 90 bp CACATTTTACTAGAAACAGGAGAAGCCAACTGCTCCTTTCAACACTaGTTTGAACTCTCCTTACGTAGGTATCCAACTTCATGGCTCCAC +
Preference number: 1 (lower is better)
Translates to: HILLETGEANCSFQH*FELSLRRYPTSWLH
Trigger: GTGGAGCCATGAAGTTGGATACCTACGTAAGGAGAGTTCAAAGCAGTGTTGAAAGGAGCAGTTGGCTTCTCCTGTTTCTAGTAAAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATaGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTT +
Preference number: 1 (lower is better)
Translates to: KRTNFTELSCSQASE*GCGEVLKLQESQLL
Trigger: AAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
3UTR GCA 90 bp CCATCTCTCTCCTTTCACATTTTACTAGAAACAGGAGAAGCCAACTaGTCCTTTCAACACTGCTTTGAACTCTCCTTACGTAGGTATCCA +
Preference number: 1 (lower is better)
Translates to: PSLSFHILLETGEAN*SFQHCFELSLRRYP
Trigger: TGGATACCTACGTAAGGAGAGTTCAAAGCAGTGTTGAAAGGAGCAGTTGGCTTCTCCTGTTTCTAGTAAAATGTGAAAGGAGAGAGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR GCA 90 bp AAAACTTGGAGAATTCTCAGTCATTATCTCCTCACAGGTTGCTTCTaGCATATTCTCTCTTCTCCTGGAAATCCAGTTACGTGTATGTTA +
Preference number: 1 (lower is better)
Translates to: KTWRILSHYLLTGCF*HILSSPGNPVTCML
Trigger: TAACATACACGTAACTGGATTTCCAGGAGAAGAGAGAATATGGCAGAAGCAACCTGTGAGGAGATAATGACTGAGAATTCTCCAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 90 bp TCATTATCTCCTCACAGGTTGCTTCTGCCATATTCTCTCTTCTCCTaGAAATCCAGTTACGTGTATGTTAGATCTTCTCAAGTTAACTCT +
Preference number: 1 (lower is better)
Translates to: SLSPHRLLLPYSLFS*KSSYVYVRSSQVNS
Trigger: AGAGTTAACTTGAGAAGATCTAACATACACGTAACTGGATTTCCAGGAGAAGAGAGAATATGGCAGAAGCAACCTGTGAGGAGATAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 90 bp CCCATTACCAACAGTTACAAAGCCATTTCCACATTTTTAGGTATTTaGTACAAAGGCATCCCACTTCTTGGTAGCAAAATCTTAATCAGC +
Preference number: 1 (lower is better)
Translates to: PITNSYKAISTFLGI*YKGIPLLGSKILIS
Trigger: GCTGATTAAGATTTTGCTACCAAGAAGTGGGATGCCTTTGTACCAAATACCTAAAAATGTGGAAATGGCTTTGTAACTGTTGGTAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR TCA 90 bp TTAATTTGGGAGAGTCATGGAGATGGGATCCAGATTGGAATGATTTaGCAAGTAAATGAAAGAGAAAACCTGGCTATGAATGAAATGGAG +
Preference number: 1 (lower is better)
Translates to: LIWESHGDGIQIGMI*QVNERENLAMNEME
Trigger: CTCCATTTCATTCATAGCCAGGTTTTCTCTTTCATTTACTTGTCAAATCATTCCAATCTGGATCCCATCTCCATGACTCTCCCAAATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 90 bp TGCCCAAGAGAAATGAAAGCTTATGTCCACATAAAGACTTGTAAATaGATGCTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCA +
Preference number: 1 (lower is better)
Translates to: CPREMKAYVHIKTCK*MLIAALHNSPKLEP
Trigger: TGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAGCATTCATTTACAAGTCTTTATGTGGACATAAGCTTTCATTTCTCTTGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 90 bp TATTTATCATGCTTTGATCTTGCAGGTCTTCATGTCTTAAAAACTTaGAGAATTCTCAGTCATTATCTCCTCACAGGTTGCTTCTGCCAT +
Preference number: 1 (lower is better)
Translates to: YLSCFDLAGLHVLKT*RILSHYLLTGCFCH
Trigger: ATGGCAGAAGCAACCTGTGAGGAGATAATGACTGAGAATTCTCCAAGTTTTTAAGACATGAAGACCTGCAAGATCAAAGCATGATAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 90 bp TATTCTTTTTCTTGTTTCTTGTGGTGGGAACTTAGGTTATTGTGCTaGGACCTTTCCTCATTTCTAATATGCTATCTTCCTAGGTATTCC +
Preference number: 1 (lower is better)
Translates to: YSFSCFLWWELRLLC*DLSSFLICYLPRYS
Trigger: GGAATACCTAGGAAGATAGCATATTAGAAATGAGGAAAGGTCTCAGCACAATAACCTAAGTTCCCACCACAAGAAACAAGAAAAAGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 90 bp TGCATTTCTACTGCTCTTTGTAAGAATTTAAGATTGTCTTTCCATTaGCGAATCAATCCATCTAGGCTTGTTGTTTCACTATGGAAAAGC +
Preference number: 1 (lower is better)
Translates to: CISTALCKNLRLSFH*RINPSRLVVSLWKS
Trigger: GCTTTTCCATAGTGAAACAACAAGCCTAGATGGATTGATTCGTCAATGGAAAGACAATCTTAAATTCTTACAAAGAGCAGTAGAAATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGAAGGCCGAAAGACCATaGTCAGGCTGCCAGTATGGT +
Preference number: 2 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGKAERP*SGCQYG
Trigger: ACCATACTGGCAGCCTGATCATGGTCTTTCGGCCTT...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR GCA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTTCCATATTTCTAGCATaGACATCAAAACCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LGWQVTASALGEGPASVASIFLA*TSKPLA
Trigger: AGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGA...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGCAATCTCTGCCTCCTaGGTTCAAGCGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGAISAS*VQAILL
Trigger: CAGGAGGATCGCTTGAACCCAGGAGGCAGAGATTGC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTTCTGGCATCATAAAATaGGTTGGGGAGGGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGSGIIK*VGEGSC
Trigger: GCAGGAACCCTCCCCAACTCATTTTATGATGCCAGA...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp ATGTCCATATTTCTAGCATGCACATCAAAACCCTTGGCTGGGTGTGATGGCTCACCAGGAGGCGGACGTTaGAGTGGGCCAAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: MSIFLACTSKPLAGCDGSPGGGR*SGPRLC
Trigger: GCACAATCTTGGCCCACTGCAACGTCCGCCTCCTGG...TGAGCCATCACACCCAGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGTAGGAGACAGCTCTTaGAGACACATGGGGTTGGCT +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGVGDSS*RHMGLA
Trigger: AGCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTAC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACGAGGCGGGCGGAGCATaGGGTCAAGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNEAGGA*GQEFET
Trigger: GGTCTCGAACTCTTGACCTCATGCTCCGCCCGCCTC...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGAGAGGACTCTTGCGTaGCCAGTGATGAAAACTGGA +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGERTLA*PVMKTG
Trigger: TCCAGTTTTCATCACTGGTCACGCAAGAGTCCTCTC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGGAAAAGGGGGAAGATaGCATGTGGTAGAGGTACAC +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGGKGGR*HVVEVH
Trigger: GTGTACCTCTACCACATGTCATCTTCCCCCTTTTCC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGCCTGCCTAGCATTGTaGCTGCTGATGTCTGTTCAA +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGACLAL*LLMSVQ
Trigger: TTGAACAGACATCAGCAGGCACAATGCTAGGCAGGC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTTCTCAGGCATCTGAATaGGGGTGTGGAGAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICSQASE*GCGEVL
Trigger: GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGA...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGACTTATCAGGTTGCTCTaGGGGATATGGACGAGTGCA +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGLIRLL*GIWTSA
Trigger: TGCACTCGTCCATATCCCCCAGAGCAACCTGATAAG...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGACCAAGTGGCTGTCCTTaGAAAAGGGGGAAGATGACA +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGPSGCP*KRGKMT
Trigger: TGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGG...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 90 bp TTGCTCTGGGTAGCGGCTGCAGCAAAGGGTCACCTGAATCCAGTTTaGGGAAGTGAGAAGATCCTAACTGCATCTGGTTTTTCTTCACCC +
Preference number: 2 (lower is better)
Translates to: LLWVAAAAKGHLNPV*GSEKILTASGFSSP
Trigger: GGGTGAAGAAAAACCAGATGCAGTTAGGATCTTCTCACTTCCCAAAACTGGATTCAGGTGACCCTTTGCTGCAGCCGCTACCCAGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTAGGAATTTAGACAGATaGAGAGAAGCTTCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGRNLDR*REASGG
Trigger: GCCTCCTGAAGCTTCTCTTCATCTGTCTAAATTCCT...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGTTTGGTTCCATACTCTaGCCACCAGGCCACTGGGGT +
Preference number: 2 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLFGSIL*PPGHWG
Trigger: ACCCCAGTGGCCTGGTGGGCAGAGTATGGAACCAAA...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR GCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCAGGGGAGGTTCTGCTaGTTGTACCGTAAGATTTCT +
Preference number: 2 (lower is better)
Translates to: FTELSCSQASEWGCGEVLQGRFC*LYRKIS
Trigger: AGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555740.5
3UTR-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTTGGCTATCTGGCTTTTaGAGAGACTTTGTCTACCAC +
Preference number: 2 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGWLSGF*RDFVYH
Trigger: GTGGTAGACAAAGTCTCTCCAAAAGCCAGATAGCCA...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTCAGGGCATCTGGGTCTaGAGATTTCTTTTATCAGGA +
Preference number: 2 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGQGIWV*RFLLSG
Trigger: TCCTGATAAAAGAAATCTCCAGACCCAGATGCCCTG...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTCTCCCGGCCTGTGTATaGTATTTTTCTATGGCATGT +
Preference number: 2 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGLPACV*YFSMAC
Trigger: ACATGCCATAGAAAAATACCATACACAGGCCGGGAG...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGGGACTGCCTTTCCTCTaGGTTCAGGGGACTTCAGAC +
Preference number: 2 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLGLPFL*VQGTSD
Trigger: GTCTGAAGTCCCCTGAACCCAGAGGAAAGGCAGTCC...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTGATATGGGAGCACTTTaGGGAGGATGCAAGGTTAAG +
Preference number: 2 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICDMGAL*GGCKVK
Trigger: CTTAACCTTGCATCCTCCTCAAAGTGCTCCCATATC...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGAGAAAACCTGGCTATaGATGAAATGGAGATATGGG +
Preference number: 2 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGEKTWL*MKWRYG
Trigger: CCCATATCTCCATTTCATTCATAGCCAGGTTTTCTC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp CAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCTTGGTTTATGAAGAGTaGAATTATGAGGAGTGTCAG +
Preference number: 2 (lower is better)
Translates to: QLLPSRQSQAILPLQPRCLVYEE*NYEECQ
Trigger: CTGACACTCCTCATAATTTCACTCTTCATAAACCAA...GCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
3UTR-3UTR TCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGAAAGATTGGCCCACTaGCCTCTAACAGCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSERLAH*PLTASG
Trigger: TCCTGAAGCTGTTAGAGGTCAGTGGGCCAATCTTTC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555740.5
3UTR-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGACTCACAGGTTGCTTCTaGCATATTCTCTCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGLTGCF*HILSSP
Trigger: AGGAGAAGAGAGAATATGGCAGAAGCAACCTGTGAG...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp GGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGGTTCTGCTGCTTGTATCTCAGGCATCTGAATaGGGGTGTGGAGAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: GEVLKNKSDIPGEVLLLVSQASE*GCGEVL
Trigger: GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGA...TACAAGCAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555740.5
3UTR CAA 90 bp ATATGCTATCTTCCTAGGTATTCCCTGGGATGTAGGAGACAGCTCTaGGAGACACATGGGGTTGGCTATCTGGCTTTTGGAGAGACTTTG +
Preference number: 2 (lower is better)
Translates to: ICYLPRYSLGCRRQL*ETHGVGYLAFGETL
Trigger: CAAAGTCTCTCCAAAAGCCAGATAGCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTACATCCCAGGGAATACCTAGGAAGATAGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCTGTTCTCAGGCATCTaGATGGGGGTGTGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNLFSGI*MGVWRS
Trigger: ACTTCTCCACACCCCCATTCAGATGCCTGAGAACAG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
3UTR-3UTR TCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGCCAGGAGAATCGCTTaGACCCAGAAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LLSHLLKATSFNTVALGIARRIA*TQKAEV
Trigger: AACCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGGC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 90 bp AGACAGATGAAGAGAAGCTTCAGGAGGCCAGGTTCCAGGTCAGTTTaGTTTTATTCATCACTGAATCTCCAGTGCCTGCCTAGCATTGTG +
Preference number: 2 (lower is better)
Translates to: RQMKRSFRRPGSRSV*FYSSLNLQCLPSIV
Trigger: CACAATGCTAGGCAGGCACTGGAGATTCAGTGATGAATAAAACAAAACTGACCTGGAACCTGGCCTCCTGAAGCTTCTCTTCATCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTCTAGGGGGCTCCTACTaGTTTCATTGGAAATTAAGT +
Preference number: 2 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICLGGSY*FHWKLS
Trigger: ACTTAATTTCCAATGAAATCAGTAGGAGCCCCCTAG...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGGAAAGGCTGGGTATTaGATTCTAAAATTGCAGATA +
Preference number: 2 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGGKAGY*ILKLQI
Trigger: TATCTGCAATTTTAGAATTCAATACCCAGCCTTTCC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAACTCCTGACCTCAAATaGTCCACCCGCCCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLTPDLK*STRPGL
Trigger: GAGGCCAGGGCGGGTGGATCATTTGAGGTCAGGAGT...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGAGGTACAATCCATCCTaGGGCAAAATTCCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLRYNPS*GKIPLQ
Trigger: CTGGAGAGGAATTTTGCCTCAGGATGGATTGTACCT...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGACCAGAAGTTTCCCTTTaGCCTTTTGTAATCATTTCC +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGPEVSL*PFVIIS
Trigger: GGAAATGATTACAAAAGGGCAAAGGGAAACTTCTGG...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATTCCCAGGGGAGGTTCTaGTGCTTGTACCGTAAGATT +
Preference number: 2 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNSQGRF*CLYRKI
Trigger: AATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGA...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555740.5
3UTR-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTTATTCACATGATGAATaGGATGAACCCCGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICYSHDE*DEPRSF
Trigger: AAAGGAGCGGGGTTCATCCCATTCATCATGTGAATA...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGTGCTGTGTCCTTAGATaGCACAGAGAGGGACAAATC +
Preference number: 2 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLCCVLR*HREGQI
Trigger: GATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCA...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CAA 90 bp AAAGCTGAAACACAGTTGGGGTTGTGTAAGGTGACAGCAGGTGAGTaGGTAAAAGAGTTAGCAGAAGTGACGGCTTTCGTTTCCTCAACT +
Preference number: 2 (lower is better)
Translates to: KAETQLGLCKVTAGE*VKELAEVTAFVSST
Trigger: AGTTGAGGAAACGAAAGCCGTCACTTCTGCTAACTCTTTTACCAACTCACCTGCTGTCACCTTACACAACCCCAACTGTGTTTCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTCTGTTCTCAGGCATCTaGATGGGGGTGTGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: LLSHLLKATSFNTVALGILFSGI*MGVWRS
Trigger: ACTTCTCCACACCCCCATTCAGATGCCTGAGAACAG...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAATGCTGCCTAACCACCTaGCCACAAGGCGGAAAAAGG +
Preference number: 2 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQCCLTT*PQGGKR
Trigger: CCTTTTTCCGCCTTGTGGTCAGGTGGTTAGGCAGCA...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGACTTTTTCCTTCTGTCTaGAGAATACCCTTTACTATC +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGLFPSV*RIPFTI
Trigger: GATAGTAAAGGGTATTCTTCAGACAGAAGGAAAAAG...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGACTTTCTCACACTTCTaGAGGCCGAAAGACCATGAT +
Preference number: 2 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLTFSHF*RPKDHD
Trigger: ATCATGGTCTTTCGGCCTTCAGAAGTGTGAGAAAGT...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGATTACAGCAGAAAACATaGACAGGCACTAATAGGAAA +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGLQQKT*TGTNRK
Trigger: TTTCCTATTAGTGCCTGTGCATGTTTTCTGCTGTAA...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGGACGAGTGCAAAGGTaGGCAGGTGCACTTGTTTAC +
Preference number: 2 (lower is better)
Translates to: LLSHLLKATSFNTVALGIGRVQR*AGALVY
Trigger: GTAAACAAGTGCACCTGCCCACCTTTGCACTCGTCC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACGGAGACACATGGGGTTaGCTATCTGGCTTTTGGAGA +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNGDTWG*LSGFWR
Trigger: TCTCCAAAAGCCAGATAGCCAACCCCATGTGTCTCC...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 90 bp TGGAACAGTTTGCTTTGGGCCAGATCCCTTATGAGTGTTTTGGTATaGTTGGGACTTGGTAGTGTGGGTAGAAGCTCTAAAGGTAGAGTT +
Preference number: 2 (lower is better)
Translates to: WNSLLWARSLMSVLV*LGLGSVGRSSKGRV
Trigger: AACTCTACCTTTAGAGCTTCTACCCACACTACCAAGTCCCAACAATACCAAAACACTCATAAGGGATCTGGCCCAAAGCAAACTGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 90 bp GTAATGTGGAACAGTTTGCTTTGGGCCAGATCCCTTATGAGTGTTTaGGTATTGTTGGGACTTGGTAGTGTGGGTAGAAGCTCTAAAGGT +
Preference number: 2 (lower is better)
Translates to: VMWNSLLWARSLMSV*VLLGLGSVGRSSKG
Trigger: ACCTTTAGAGCTTCTACCCACACTACCAAGTCCCAACAATACCAAAACACTCATAAGGGATCTGGCCCAAAGCAAACTGTTCCACATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAACCAGAAGGCGGAGGTTaGAGTGAGCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKPEGGG*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAACCTCCGCCTTCTGG...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAGCTCTGGCATTAAGCTaGTCCCCCACTTCTGTAGGT +
Preference number: 2 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQALALS*SPTSVG
Trigger: ACCTACAGAAGTGGGGGACCAGCTTAATGCCAGAGC...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGATATTTTTACTACAGATaGGGTTTCATTGTGTTAGCC +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGYFYYR*GFIVLA
Trigger: GGCTAACACAATGAAACCCCATCTGTAGTAAAAATA...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGATTTTCTTGTTTCTTGTaGTGGGAACTTAGGTTATTG +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGFSCFL*WELRLL
Trigger: CAATAACCTAAGTTCCCACCACAAGAAACAAGAAAA...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGCATACATAACAACATaGATATGTACTAGAGGCATA +
Preference number: 2 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGAYITT*ICTRGI
Trigger: TATGCCTCTAGTACATATCCATGTTGTTATGTATGC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 90 bp AACAGTTTGCTTTGGGCCAGATCCCTTATGAGTGTTTTGGTATTGTaGGGACTTGGTAGTGTGGGTAGAAGCTCTAAAGGTAGAGTTTCA +
Preference number: 2 (lower is better)
Translates to: NSLLWARSLMSVLVL*GLGSVGRSSKGRVS
Trigger: TGAAACTCTACCTTTAGAGCTTCTACCCACACTACCAAGTCCCAACAATACCAAAACACTCATAAGGGATCTGGCCCAAAGCAAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTACTGTTCTCAGGCATCTaGATGGGGGTGTGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILLFSGI*MGVWRS
Trigger: ACTTCTCCACACCCCCATTCAGATGCCTGAGAACAG...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
3UTR-3UTR GCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTAGGTGTGCACCACCATaGCCGGCTAAGTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: LLSHLLKATSFNTVALGIRCAPP*PAKFCI
Trigger: AATACAAAACTTAGCCGGGCATGGTGGTGCACACCT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTATCTCAGGCATCTGAATaGGGGTGTGGAGAAGTCCTC +
Preference number: 2 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILSQASE*GCGEVL
Trigger: GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGA...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
3UTR-3UTR CCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAGCTCTGGCATTAAGCTaGTCCCCCACTTCTGTAGGT +
Preference number: 2 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPALALS*SPTSVG
Trigger: ACCTACAGAAGTGGGGGACCAGCTTAATGCCAGAGC...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAGGAGACACATGGGGTTaGCTATCTGGCTTTTGGAGA +
Preference number: 2 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQGDTWG*LSGFWR
Trigger: TCTCCAAAAGCCAGATAGCCAACCCCATGTGTCTCC...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 90 bp AGTTATAAAAATAACTCAAAAGATCAGTCCAGAGAGGATTTACATTaGCTCTGGGTAGCGGCTGCAGCAAAGGGTCACCTGAATCCAGTT +
Preference number: 2 (lower is better)
Translates to: SYKNNSKDQSREDLH*LWVAAAAKGHLNPV
Trigger: AACTGGATTCAGGTGACCCTTTGCTGCAGCCGCTACCCAGAGCAAATGTAAATCCTCTCTGGACTGATCTTTTGAGTTATTTTTATAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACGAGAAAACCTGGCTATaGATGAAATGGAGATATGGG +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNEKTWL*MKWRYG
Trigger: CCCATATCTCCATTTCATTCATAGCCAGGTTTTCTC...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTTCCAGTTTTGGGAAGTaGGAAGATCCTAACTGCATC +
Preference number: 2 (lower is better)
Translates to: LLSHLLKATSFNTVALGISSFGK*EDPNCI
Trigger: GATGCAGTTAGGATCTTCTCACTTCCCAAAACTGGA...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGTGGATCAATAATTCTTaGAGGCTAAGCACTCTCCCA +
Preference number: 2 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQWINNS*RLSTLP
Trigger: TGGGAGAGTGCTTAGCCTTCAAGAATTATTGATCCA...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555740.5
3UTR-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTATCTCCTCACAGGTTaGTTCTGCCATATTCTCTCT +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNYLLTG*FCHILS
Trigger: AGAGAGAATATGGCAGAAGCAACCTGTGAGGAGATA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAACCTGTCCCTTGCCTATaGAGTATTTGGCCACTTACA +
Preference number: 2 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQPVPCL*SIWPLT
Trigger: TGTAAGTGGCCAAATACTGCATAGGCAAGGGACAGG...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACAGGGAAGAGGATGGCTaGCTCTTTCATCTTTATAAG +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNREEDG*LFHLYK
Trigger: CTTATAAAGATGAAAGAGGCAGCCATCCTCTTCCCT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAGTAGGAGACAGCTCTTaGAGACACATGGGGTTGGCT +
Preference number: 2 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKVGDSS*RHMGLA
Trigger: AGCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTAC...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 90 bp TGTCTTAAAAACTTGGAGAATTCTCAGTCATTATCTCCTCACAGGTaGCTTCTGCCATATTCTCTCTTCTCCTGGAAATCCAGTTACGTG +
Preference number: 2 (lower is better)
Translates to: CLKNLENSQSLSPHR*LLPYSLFSWKSSYV
Trigger: CACGTAACTGGATTTCCAGGAGAAGAGAGAATATGGCAGAAGCAACCTGTGAGGAGATAATGACTGAGAATTCTCCAAGTTTTTAAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGATATGGGAGCACTTTaGGGAGGATGCAAGGTTAAG +
Preference number: 2 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLDMGAL*GGCKVK
Trigger: CTTAACCTTGCATCCTCCTCAAAGTGCTCCCATATC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp GAGCTTGTATACTATAACGTTCTTCATCATCGTTTGTGGCATAAAGTAATTCCCTTTGTCTGCCTTTTCTaGTCTGTTGCCTCAGCGATG +
Preference number: 2 (lower is better)
Translates to: ELVYYNVLHHRLWHKVIPFVCLF*SVASAM
Trigger: CATCGCTGAGGCAACAGATCAGAAAAGGCAGACAAA...GGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555740.5
3UTR-3UTR GCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTCCAGTCCTAGGTATTTaGCCAAGAGAAATGAAAGCT +
Preference number: 2 (lower is better)
Translates to: LLSHLLKATSFNTVALGIPVLGI*PREMKA
Trigger: AGCTTTCATTTCTCTTGGGCAAATACCTAGGACTGG...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp TCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCGAGTGTCAGCATGTTTaGAAGCCAATGGGATGGAGT +
Preference number: 2 (lower is better)
Translates to: SVQCMLTYHLSHLPKFESECQHV*KPMGWS
Trigger: ACTCCATCCCATTGGCTTGCAAACATGCTGACACTC...GGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
3UTR-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTCTTGTTTCTTGTGGTaGGAACTTAGGTTATTGTGC +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNSCFLW*ELRLLC
Trigger: GCACAATAACCTAAGTTCCCACCACAAGAAACAAGA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGACATTTTTAGGTATTTaGTACAAAGGCATCCCACTT +
Preference number: 2 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLTFLGI*YKGIPL
Trigger: AAGTGGGATGCCTTTGTACCAAATACCTAAAAATGT...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR CCA 90 bp TATCCCAGGGGAGGTTCTGCTGCTTGTACCGTAAGATTTCTTAAAAGTAGTGGACTTCATCATCGTTTGTaGCATAAAGTAATTCCCATG +
Preference number: 2 (lower is better)
Translates to: YPRGGSAACTVRFLKSSGLHHRL*HKVIPM
Trigger: CATGGGAATTACTTTATGCCACAAACGATGATGAAG...TCCACTACTTTTAAGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
3UTR CAA 90 bp AAAGTAGTGGATGAGCTTGTATACTATAACGTTCTTCATCATCGTTaGTGGCATAAAGTAATTCCCATGAAAGATTGGCCCACTGACCTC +
Preference number: 2 (lower is better)
Translates to: KVVDELVYYNVLHHR*WHKVIPMKDWPTDL
Trigger: GAGGTCAGTGGGCCAATCTTTCATGGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTCATCCACTACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
3UTR-3UTR TCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACGTCTACCATAAGTTTTaGCATGTAGCACTTTCACTA +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNVYHKF*HVALSL
Trigger: TAGTGAAAGTGCTACATGTCAAAACTTATGGTAGAC...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAATTTTCCCTGTCCCTTaGCTATGCAGTATTTGGCCA +
Preference number: 2 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLIFPVP*LCSIWP
Trigger: TGGCCAAATACTGCATAGGCAAGGGACAGGGAAAAT...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGGAGAGTCATGGAGATaGGATCCAGATTGGAATGAT +
Preference number: 2 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLGESWR*DPDWND
Trigger: ATCATTCCAATCTGGATCCCATCTCCATGACTCTCC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATGGCTATCTGGCTTTTaGAGAGACTTTGTCTACCAC +
Preference number: 2 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLWLSGF*RDFVYH
Trigger: GTGGTAGACAAAGTCTCTCCAAAAGCCAGATAGCCA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 90 bp TTTAGATCTTTAAACACACTAAACATAGTAATTTTAGACCCTGTGTaGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCAT +
Preference number: 2 (lower is better)
Translates to: FRSLNTLNIVILDPV*YSSLSGSPVALSHH
Trigger: ATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAGGGTCTAAAATTACTATGTTTAGTGTGTTTAAAGATCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 90 bp TCCAGGCTGAAAATTTTCCAAATCTTCAAGTTCTGGTTCCTTCTCTaGCTTAACAATCCCTTCTTCAATCCATCTCTCTCCTTTCACATT +
Preference number: 2 (lower is better)
Translates to: SRLKIFQIFKFWFLL*LNNPFFNPSLSFHI
Trigger: AATGTGAAAGGAGAGAGATGGATTGAAGAAGGGATTGTTAAGCAAGAGAAGGAACCAGAACTTGAAGATTTGGAAAATTTTCAGCCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CAA 90 bp ATTACAGTCAAAATGAGCTCTAATACAAATGTATGTGGAGAGGTTTaGAAGAATAAATCGGATATCCCAGGGGAGGTTCTGCTGCTTGTA +
Preference number: 2 (lower is better)
Translates to: ITVKMSSNTNVCGEV*KNKSDIPGEVLLLV
Trigger: TACAAGCAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCCACATACATTTGTATTAGAGCTCATTTTGACTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555740.5
3UTR-3UTR GCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAATCCCTATCATATCTTaGTGGGCAAAGTTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPIPIIS*WAKFQG
Trigger: TCCTTGGAACTTTGCCCAGCAAGATATGATAGGGAT...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACCAATTTGTTAAGTTTTaGCATATGGCTACACTTGTG +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNQFVKF*HMATLV
Trigger: CACAAGTGTAGCCATATGGCAAAACTTAACAAATTG...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACAGAGGGCACAAATATTaGCCAAATAGTTCTTTTATC +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNRGHKY*PNSSFI
Trigger: GATAAAAGAACTATTTGGCCAATATTTGTGCCCTCT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTTCTTTTGCCTGCTTTaGGCTTATTTTGCTATTCTT +
Preference number: 2 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNFFCLL*AYFAIL
Trigger: AAGAATAGCAAAATAAGCCCAAAGCAGGCAAAAGAA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTTCCTCATTTCTAATATaGTATCTTCCTAGGTATTCC +
Preference number: 2 (lower is better)
Translates to: LLSHLLKATSFNTVALGISSFLI*YLPRYS
Trigger: GGAATACCTAGGAAGATAGCATATTAGAAATGAGGA...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGCAGGTAGGATTCATTaGACCTATTATTCATTAAAC +
Preference number: 2 (lower is better)
Translates to: LLSHLLKATSFNTVALGIAGRIH*TYYSLN
Trigger: GTTTAATGAATAATAGGTGCAATGAATCCTACCTGC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAAGCTGCTTCAAGGAATaGTCAAATGTGTCAATTACT +
Preference number: 2 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQSCFKE*SNVSIT
Trigger: AGTAATTGACACATTTGACCATTCCTTGAAGCAGCT...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAACACCTTATCCTGAATTaGCATGTCTCCTATAAGAAA +
Preference number: 2 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQHLILN*HVSYKK
Trigger: TTTCTTATAGGAGACATGCCAATTCAGGATAAGGTG...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAACATCATAAAATGAGTTaGGGAGGGTTCCTGCATTTC +
Preference number: 2 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKHHKMS*GGFLHF
Trigger: GAAATGCAGGAACCCTCCCCAACTCATTTTATGATG...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAAGCGAAGGCATAGCTTaGCATTATTATCACAGTGAA +
Preference number: 2 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKSEGIA*HYYHSE
Trigger: TTCACTGTGATAATAATGTCAAGCTATGCCTTCGCT...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATGGTTACCCTATAGATaGCACAGCAGTCTTATTTAT +
Preference number: 2 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLWLPYR*HSSLIY
Trigger: ATAAATAAGACTGCTGTGTCATCTATAGGGTAACCA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAATAGCCAAAATCCCATaGGTTTCTTATCAGGTTGCT +
Preference number: 2 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKIAKIP*VSYQVA
Trigger: AGCAACCTGATAAGAAACTCATGGGATTTTGGCTAT...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATATTCTCTCTTCTCCTaGAAATCCAGTTACGTGTAT +
Preference number: 2 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLYSLFS*KSSYVY
Trigger: ATACACGTAACTGGATTTCCAGGAGAAGAGAGAATA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR TCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAATATACACTTATCATATaGTTTAGCCATCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKYTLII*FSHPSP
Trigger: AGGACTGGGATGGCTAAATCATATGATAAGTGTATA...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR GCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATCCTCATTTCTAATATaGTATCTTCCTAGGTATTCC +
Preference number: 2 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLSSFLI*YLPRYS
Trigger: GGAATACCTAGGAAGATAGCATATTAGAAATGAGGA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAAGAGGGCACAAATATTaGCCAAATAGTTCTTTTATC +
Preference number: 2 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPRGHKY*PNSSFI
Trigger: GATAAAAGAACTATTTGGCCAATATTTGTGCCCTCT...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCATGTAAGAAGAGAGGTTaGGTTAGGTACATATATTTG +
Preference number: 2 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPCKKRG*VRYIYL
Trigger: CAAATATATGTACCTAACCCAACCTCTCTTCTTACA...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTGCCAGGAGGCGGACGTaGCAGTGGGCCAAGATTGTG +
Preference number: 3 (lower is better)
Translates to: LGWQVTASALGEGPASVAARRRT*QWAKIV
Trigger: CACAATCTTGGCCCACTGCAACGTCCGCCTCCTGGC...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CCA 72 bp GACAGGCCACCTTACTACAGAGGAAGCACAGCCTCCTaGCAGAGCATGCAGCCTGGTGCTAGGCTACCTGGG +
Preference number: 3 (lower is better)
Translates to: DRPPYYRGSTAS*QSMQPGARLPG
Trigger: CCCAGGTAGCCTAGCACCAGGCTGCATGCTCTGCCAGGAGGCTGTGCTTCCTCTGTAGTAAGGTGGCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR GCA 72 bp GGCTGGAGTGCAGTGACACCATCAGTCTCGGCTCACTaGAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCC +
Preference number: 3 (lower is better)
Translates to: GWSAVTPSVSAH*NFCLPGSLKQS
Trigger: GGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTGAGCCGAGACTGATGGTGTCACTGCACTCCAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
3UTR-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTAGCCAGGAGAATCGCTaGAACCCAGAAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGSQENR*NPEGGG
Trigger: ACCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGGCT...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 72 bp TCAGTTCTGCTCCCGAGGCTTTGGGTAGAGGCTAGCTaGCTTGTTGAAACAGGTGGTAGCCCTCAAGACCCT +
Preference number: 3 (lower is better)
Translates to: SVLLPRLWVEAS*LVETGGSPQDP
Trigger: AGGGTCTTGAGGGCTACCACCTGTTTCAACAAGTCAGCTAGCCTCTACCCAAAGCCTCGGGAGCAGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CCA 72 bp GTTGGGCAAGTTGGAAGCCACCCAAGTGGCTGTCCTTaGAAAAGGGGGAAGATGACATGTGGTAGAGGTACA +
Preference number: 3 (lower is better)
Translates to: VGQVGSHPSGCP*KRGKMTCGRGT
Trigger: TGTACCTCTACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAACTTGCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGAAACACAGTTGGGGTaGTGTAAGGTGACAGCAGGT +
Preference number: 3 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGETQLG*CKVTAG
Trigger: ACCTGCTGTCACCTTACACAACCCCAACTGTGTTTC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGCTGTCACCCAATGGTTaGATGATTTTTAATCCATGG +
Preference number: 3 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGLSPNG*MIFNPW
Trigger: CCATGGATTAAAAATCATCAAACCATTGGGTGACAG...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR CAA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGCTTGAGGTCAGGACTTaGGGACCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLLEVRT*GPAWPT
Trigger: TGTTGGCCAGGCTGGTCCCAAAGTCCTGACCTCAAG...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR GCA 72 bp GTCCAGAGAGGATTTACATTTGCTCTGGGTAGCGGCTaGAGCAAAGGGTCACCTGAATCCAGTTTTGGGAAG +
Preference number: 3 (lower is better)
Translates to: VQRGFTFALGSG*SKGSPESSFGK
Trigger: CTTCCCAAAACTGGATTCAGGTGACCCTTTGCTGCAGCCGCTACCCAGAGCAAATGTAAATCCTCTCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR GCA 72 bp GTTTCTTATCAGGTTGCTCTGGGGGATATGGACGAGTaGAAAGGTGGGCAGGTGCACTTGTTTACCCTGAGT +
Preference number: 3 (lower is better)
Translates to: VSYQVALGDMDE*KGGQVHLFTLS
Trigger: ACTCAGGGTAAACAAGTGCACCTGCCCACCTTTGCACTCGTCCATATCCCCCAGAGCAACCTGATAAGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR GCA 72 bp AGGCTGATCTCTGCTTCCAAGATGGCACCTCATTGCTaGATCCTCCACAGTGGAGGAATGTATGTCCTCACA +
Preference number: 3 (lower is better)
Translates to: RLISASKMAPHC*ILHSGGMYVLT
Trigger: TGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATGAGGTGCCATCTTGGAAGCAGAGATCAGCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp TTCCAAGATGGCACCTCATTGCTGCATCCTCCACAGTaGAGGAATGTATGTCCTCACATGGTGGAAGGGACA +
Preference number: 3 (lower is better)
Translates to: FQDGTSLLHPPQ*RNVCPHMVEGT
Trigger: TGTCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATGAGGTGCCATCTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 72 bp ACCAATGCACCAGCAGAATTAGTGTCTGGTGAAGGCTaGTCTCTGCTTCCAAGATGGCACCTCATTGCTGCA +
Preference number: 3 (lower is better)
Translates to: TNAPAELVSGEG*SLLPRWHLIAA
Trigger: TGCAGCAATGAGGTGCCATCTTGGAAGCAGAGATCAGCCTTCACCAGACACTAATTCTGCTGGTGCATTGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp ACCCTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTaGCTCTGTCCCATCATCTGTCGCTTCTTTCGGATT +
Preference number: 3 (lower is better)
Translates to: TLCCIAHYLGPL*LCPIICRFFRI
Trigger: AATCCGAAAGAAGCGACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGATTATCTCCTCACAGGTaGCTTCTGCCATATTCTCTC +
Preference number: 3 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGLSPHR*LLPYSL
Trigger: GAGAGAATATGGCAGAAGCAACCTGTGAGGAGATAA...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTAGTTTTTGCCAGGTTTaGGTATCTAGGTTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGSFCQV*VSRFSG
Trigger: GCCAGAAAACCTAGATACCAAAACCTGGCAAAAACT...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGCTTTTGGAGAGACTTaGTCTACCACAAGAATAGAG +
Preference number: 3 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGAFGET*STTRIE
Trigger: CTCTATTCTTGTGGTAGACAAAGTCTCTCCAAAAGC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 72 bp TTGCACTGGGCCTTGAAAGAAAGGAATTTAGACAGATaGAGAGAAGCTTCAGGAGGCCAGGTTCCAGGTCAG +
Preference number: 3 (lower is better)
Translates to: LHWALKERNLDR*REASGGQVPGQ
Trigger: CTGACCTGGAACCTGGCCTCCTGAAGCTTCTCTTCATCTGTCTAAATTCCTTTCTTTCAAGGCCCAGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 72 bp TTCCAAGACCAATGCACCAGCAGAATTAGTGTCTGGTaGAGGCTGATCTCTGCTTCCAAGATGGCACCTCAT +
Preference number: 3 (lower is better)
Translates to: FQDQCTSRISVW*RLISASKMAPH
Trigger: ATGAGGTGCCATCTTGGAAGCAGAGATCAGCCTTCACCAGACACTAATTCTGCTGGTGCATTGGTCTTGGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR GCA 72 bp CTAACAGTTCTGGGGGCTACAAGTACAAGATCAGGCTaGCAGTATAGTCAGGTTCTGGTGAAGACTCTCTTC +
Preference number: 3 (lower is better)
Translates to: LTVLGATSTRSG*QYSQVLVKTLF
Trigger: GAAGAGAGTCTTCACCAGAACCTGACTATACTGGCAGCCTGATCTTGTACTTGTAGCCCCCAGAACTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CCA 72 bp TCAAAAGATCAGTCCAGAGAGGATTTACATTTGCTCTaGGTAGCGGCTGCAGCAAAGGGTCACCTGAATCCA +
Preference number: 3 (lower is better)
Translates to: SKDQSREDLHLL*VAAAAKGHLNP
Trigger: TGGATTCAGGTGACCCTTTGCTGCAGCCGCTACCCAGAGCAAATGTAAATCCTCTCTGGACTGATCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTCACCTGAATCCAGTTTaGGGAAGTGAGAAGATCCTA +
Preference number: 3 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICHLNPV*GSEKIL
Trigger: TAGGATCTTCTCACTTCCCAAAACTGGATTCAGGTG...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTATCCATCTAGGCTTGTaGTTTCACTATGGAAAAGCA +
Preference number: 3 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGIHLGL*FHYGKA
Trigger: TGCTTTTCCATAGTGAAACAACAAGCCTAGATGGAT...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTCTTTCATTCCTGATATaGGTTGTTTGTGTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGLSFLI*VVCVSS
Trigger: GGAAGAAACACAAACAACCAATATCAGGAATGAAAG...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTGGAGACACATGGGGTaGGCTATCTGGCTTTTGGAG +
Preference number: 3 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNWRHMG*AIWLLE
Trigger: CTCCAAAAGCCAGATAGCCAACCCCATGTGTCTCCA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR GCA 72 bp TTACATAGCCAAAATCCCATGAGTTTCTTATCAGGTTaGTCTGGGGGATATGGACGAGTGCAAAGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: LHSQNPMSFLSG*SGGYGRVQRWA
Trigger: TGCCCACCTTTGCACTCGTCCATATCCCCCAGAGCAACCTGATAAGAAACTCATGGGATTTTGGCTATGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp ACCAAGATCTCCCCATTTCCTCCATCTTCTGGCTCCTaGCAACCATCATTCTACTCTGCTTTTGAGTATGAC +
Preference number: 3 (lower is better)
Translates to: TKISPFPPSSGS*QPSFYSAFEYD
Trigger: GTCATACTCAAAAGCAGAGTAGAATGATGGTTGCCAGGAGCCAGAAGATGGAGGAAATGGGGAGATCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTACCCTCCCCTACTTCCTaGGAGAGTCTTGGTCTCCAG +
Preference number: 3 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLPSPTS*ESLGLQ
Trigger: CTGGAGACCAAGACTCTCCAAGGAAGTAGGGGAGGG...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 72 bp TGCAGCAAAGGGTCACCTGAATCCAGTTTTGGGAAGTaGGAAGATCCTAACTGCATCTGGTTTTTCTTCACC +
Preference number: 3 (lower is better)
Translates to: CSKGSPESSFGK*EDPNCIWFFFT
Trigger: GGTGAAGAAAAACCAGATGCAGTTAGGATCTTCTCACTTCCCAAAACTGGATTCAGGTGACCCTTTGCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp AACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATaGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCA +
Preference number: 3 (lower is better)
Translates to: NFTELSCSQASE*GCGEVLKLQES
Trigger: TGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
3UTR-3UTR CAA 90 bp ATGTCCATATTTCTAGCATGCACATCAAAACCCTTGGCTGGGTGTGATGGCTCACAGTATGGTCAGGTTTaGATGAGAGCTCTCTTCTTT +
Preference number: 3 (lower is better)
Translates to: MSIFLACTSKPLAGCDGSQYGQV*MRALFF
Trigger: AAAGAAGAGAGCTCTCATCAAAACCTGACCATACTG...TGAGCCATCACACCCAGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR TCA 72 bp ATGCAGTATTTGGCCACTTACATAGCCAAAATCCCATaGGTTTCTTATCAGGTTGCTCTGGGGGATATGGAC +
Preference number: 3 (lower is better)
Translates to: MQYLATYIAKIP*VSYQVALGDMD
Trigger: GTCCATATCCCCCAGAGCAACCTGATAAGAAACTCATGGGATTTTGGCTATGTAAGTGGCCAAATACTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 72 bp ATTTACTTTCTCACACTTCTGAAGGCCGAAAGACCATaGTCAGGCTGCCAGTATGGTCAGGTTTTGATGAGA +
Preference number: 3 (lower is better)
Translates to: IYFLTLLKAERP*SGCQYGQVLMR
Trigger: TCTCATCAAAACCTGACCATACTGGCAGCCTGATCATGGTCTTTCGGCCTTCAGAAGTGTGAGAAAGTAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR GCA 72 bp TCATCAGAATCACCCTTAATGTCCATATTTCTAGCATaGACATCAAAACCCTTGGCTGGGTGTGATGGCTCA +
Preference number: 3 (lower is better)
Translates to: SSESPLMSIFLA*TSKPLAGCDGS
Trigger: TGAGCCATCACACCCAGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGACATTAAGGGTGATTCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR GCA 72 bp CTAGAAACAGGAGAAGCCAACTGCTCCTTTCAACACTaGTTTGAACTCTCCTTACGTAGGTATCCAACTTCA +
Preference number: 3 (lower is better)
Translates to: LETGEANCSFQH*FELSLRRYPTS
Trigger: TGAAGTTGGATACCTACGTAAGGAGAGTTCAAAGCAGTGTTGAAAGGAGCAGTTGGCTTCTCCTGTTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CCA 72 bp TTAGCGTCTCAGACTCTCAACCACCTTATCCTGAATTaGCATGTCTCCTATAAGAAAAGCAGCCCAAATGCT +
Preference number: 3 (lower is better)
Translates to: LASQTLNHLILN*HVSYKKSSPNA
Trigger: AGCATTTGGGCTGCTTTTCTTATAGGAGACATGCCAATTCAGGATAAGGTGGTTGAGAGTCTGAGACGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp CCTAACTGCATCTGGTTTTTCTTCACCCTTACAATTTaGATATGGTCCTTGGGGTCACAACCCAATGTATGG +
Preference number: 3 (lower is better)
Translates to: PNCIWFFFTLTI*IWSLGSQPNVW
Trigger: CCATACATTGGGTTGTGACCCCAAGGACCATATCCAAATTGTAAGGGTGAAGAAAAACCAGATGCAGTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp TGCTTTGAACTCTCCTTACGTAGGTATCCAACTTCATaGCTCCACAAAACACTAGGACACAGTTCAGCTAAG +
Preference number: 3 (lower is better)
Translates to: CFELSLRRYPTS*LHKTLGHSSAK
Trigger: CTTAGCTGAACTGTGTCCTAGTGTTTTGTGGAGCCATGAAGTTGGATACCTACGTAAGGAGAGTTCAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR CAA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTCCCAGTCCTAGGTATTaGCCCAAGAGAAATGAAAGC +
Preference number: 3 (lower is better)
Translates to: LLSHLLKATSFNTVALGIPSPRY*PKRNES
Trigger: GCTTTCATTTCTCTTGGGCAAATACCTAGGACTGGG...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp TCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCGGAGTGTCAGCATGTTaGCAAGCCAATGGGATGGAG +
Preference number: 3 (lower is better)
Translates to: SVQCMLTYHLSHLPKFESGVSAC*QANGME
Trigger: CTCCATCCCATTGGCTTGCAAACATGCTGACACTCC...GGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
3UTR-3UTR CAA 90 bp GGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGGTTCTGCTGCTTGTAGTTCTTCATCATCGTTaGTGGCATAAAGTAATTCCC +
Preference number: 3 (lower is better)
Translates to: GEVLKNKSDIPGEVLLLVVLHHR*WHKVIP
Trigger: GGGAATTACTTTATGCCACAAACGATGATGAAGAAC...TACAAGCAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
3UTR TCA 72 bp TGGCTTAAACAACATCAATTTACTTTCTCACACTTCTaGAGGCCGAAAGACCATGATCAGGCTGCCAGTATG +
Preference number: 3 (lower is better)
Translates to: WLKQHQFTFSHF*RPKDHDQAASM
Trigger: CATACTGGCAGCCTGATCATGGTCTTTCGGCCTTCAGAAGTGTGAGAAAGTAAATTGATGTTGTTTAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CCA 72 bp CCTCACAGGTTGCTTCTGCCATATTCTCTCTTCTCCTaGAAATCCAGTTACGTGTATGTTAGATCTTCTCAA +
Preference number: 3 (lower is better)
Translates to: PHRLLLPYSLFS*KSSYVYVRSSQ
Trigger: TTGAGAAGATCTAACATACACGTAACTGGATTTCCAGGAGAAGAGAGAATATGGCAGAAGCAACCTGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACAGTTTTTGCCAGGTTTaGGTATCTAGGTTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNSFCQV*VSRFSG
Trigger: GCCAGAAAACCTAGATACCAAAACCTGGCAAAAACT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR GCA 72 bp TCCTTTCACATTTTACTAGAAACAGGAGAAGCCAACTaGTCCTTTCAACACTGCTTTGAACTCTCCTTACGT +
Preference number: 3 (lower is better)
Translates to: SFHILLETGEAN*SFQHCFELSLR
Trigger: ACGTAAGGAGAGTTCAAAGCAGTGTTGAAAGGAGCAGTTGGCTTCTCCTGTTTCTAGTAAAATGTGAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR CAA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTCAATCCATCTAGGCTaGTTGTTTCACTATGGAAAA +
Preference number: 3 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNSIHLG*LFHYGK
Trigger: TTTTCCATAGTGAAACAACAAGCCTAGATGGATTGA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR GCA 72 bp TTCTGTAGGTTTTATGCTAGACATAAAGTCTGCATTTaGTGTCAAGCTGCCCTCTGTGTGTCTTTCTTTAAC +
Preference number: 3 (lower is better)
Translates to: FCRFYARHKVCI*CQAALCVSFFN
Trigger: GTTAAAGAAAGACACACAGAGGGCAGCTTGACAGCAAATGCAGACTTTATGTCTAGCATAAAACCTACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp TGCTTTGATCTTGCAGGTCTTCATGTCTTAAAAACTTaGAGAATTCTCAGTCATTATCTCCTCACAGGTTGC +
Preference number: 3 (lower is better)
Translates to: CFDLAGLHVLKT*RILSHYLLTGC
Trigger: GCAACCTGTGAGGAGATAATGACTGAGAATTCTCCAAGTTTTTAAGACATGAAGACCTGCAAGATCAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp GTTTTCTACCAAGTAGTAATGTGGAACAGTTTGCTTTaGGCCAGATCCCTTATGAGTGTTTTGGTATTGTTG +
Preference number: 3 (lower is better)
Translates to: VFYQVVMWNSLL*ARSLMSVLVLL
Trigger: CAACAATACCAAAACACTCATAAGGGATCTGGCCCAAAGCAAACTGTTCCACATTACTACTTGGTAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp TCATTACTTCCTGTCTCCAACCACTTCAATTCAAACTaGCAGTGTTTCTACTCACATAATGCCAAAAGCTCT +
Preference number: 3 (lower is better)
Translates to: SLLPVSNHFNSN*QCFYSHNAKSS
Trigger: AGAGCTTTTGGCATTATGTGAGTAGAAACACTGCCAGTTTGAATTGAAGTGGTTGGAGACAGGAAGTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR CAA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTTCTGGGAATGCAGACTaGTCTTTTCTCATTTTAGTT +
Preference number: 3 (lower is better)
Translates to: LLSHLLKATSFNTVALGISGNAD*SFLILV
Trigger: AACTAAAATGAGAAAAGACAAGTCTGCATTCCCAGA...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTAGTTGTGCACATATTTaGTCAGATGACTCTAGGATT +
Preference number: 3 (lower is better)
Translates to: LLSHLLKATSFNTVALGISCAHI*SDDSRI
Trigger: AATCCTAGAGTCATCTGACAAAATATGTGCACAACT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 72 bp TCTTGTTTCTTGTGGTGGGAACTTAGGTTATTGTGCTaGGACCTTTCCTCATTTCTAATATGCTATCTTCCT +
Preference number: 3 (lower is better)
Translates to: SCFLWWELRLLC*DLSSFLICYLP
Trigger: AGGAAGATAGCATATTAGAAATGAGGAAAGGTCTCAGCACAATAACCTAAGTTCCCACCACAAGAAACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR-3UTR CAA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAATCCATCTAGGCTTGTaGTTTCACTATGGAAAAGCA +
Preference number: 3 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLIHLGL*FHYGKA
Trigger: TGCTTTTCCATAGTGAAACAACAAGCCTAGATGGAT...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR TCA 72 bp CTTCTAAGCATGGCTTTAGGCGTCTACCATAAGTTTTaGCATGTAGCACTTTCACTACTCAGTTCAAATATA +
Preference number: 3 (lower is better)
Translates to: LLSMALGVYHKF*HVALSLLSSNI
Trigger: TATATTTGAACTGAGTAGTGAAAGTGCTACATGTCAAAACTTATGGTAGACGCCTAAAGCCATGCTTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR GCA 72 bp AAATTTTCCAAATCTTCAAGTTCTGGTTCCTTCTCTTaGTTAACAATCCCTTCTTCAATCCATCTCTCTCCT +
Preference number: 3 (lower is better)
Translates to: KFSKSSSSGSFS*LTIPSSIHLSP
Trigger: AGGAGAGAGATGGATTGAAGAAGGGATTGTTAAGCAAGAGAAGGAACCAGAACTTGAAGATTTGGAAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CCA 72 bp AACAGTTACAAAGCCATTTCCACATTTTTAGGTATTTaGTACAAAGGCATCCCACTTCTTGGTAGCAAAATC +
Preference number: 3 (lower is better)
Translates to: NSYKAISTFLGI*YKGIPLLGSKI
Trigger: GATTTTGCTACCAAGAAGTGGGATGCCTTTGTACCAAATACCTAAAAATGTGGAAATGGCTTTGTAACTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR-3UTR CAA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATTTCTTTTGCCTGCTTaGGGCTTATTTTGCTATTCT +
Preference number: 3 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLFLLPA*GLFCYS
Trigger: AGAATAGCAAAATAAGCCCAAAGCAGGCAAAAGAAA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp TACCAAAGCCTACTAAAGTCCAGAGGGCACAAATATTaGCCAAATAGTTCTTTTATCTTAGACATAAAGATG +
Preference number: 3 (lower is better)
Translates to: YQSLLKSRGHKY*PNSSFILDIKM
Trigger: CATCTTTATGTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCTTTGGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
3UTR TCA 72 bp ACTGCTCTTTGTAAGAATTTAAGATTGTCTTTCCATTaGCGAATCAATCCATCTAGGCTTGTTGTTTCACTA +
Preference number: 3 (lower is better)
Translates to: TALCKNLRLSFH*RINPSRLVVSL
Trigger: TAGTGAAACAACAAGCCTAGATGGATTGATTCGTCAATGGAAAGACAATCTTAAATTCTTACAAAGAGCAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CCA 72 bp GTAAATGCATATCTTCTGAAAAGAAACATCACATCTTaGGGATTATCAGGTTGCCTTGTTTTATTCCTTAAG +
Preference number: 3 (lower is better)
Translates to: VNAYLLKRNITS*GLSGCLVLFLK
Trigger: CTTAAGGAATAAAACAAGGCAACCTGATAATCCCCAAGATGTGATGTTTCTTTTCAGAAGATATGCATTTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGAAAGCCGAGACGCCCTaGACGTTCCCTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGKAETP*TFPWAG
Trigger: CCCGGCCCAAGGGAACGTTCAGGGCGTCTCGGCTTT...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTGGCGGGTGGATCACTTaGGGTCAGGACTTTGGGACC +
Preference number: 4 (lower is better)
Translates to: LGWQVTASALGEGPASVAGGWIT*GQDFGT
Trigger: GGTCCCAAAGTCCTGACCTCAAGTGATCCACCCGCC...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp ACTCAGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGGACGGGAGTCGCTCGTaGTCTGGTCTCGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: TQEAQGGVSLEARRRTLQDGSRS*SGLALG
Trigger: GCCCAGTGCGAGACCAGAGCACGAGCGACTCCCGTC...CTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp ACTCAGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGGAGTCGCTCGTGCTCTaGTCTCGCACTGGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: TQEAQGGVSLEARRRTLQESLVL*SRTGPS
Trigger: GCTAGGCCCAGTGCGAGACCAGAGCACGAGCGACTC...CTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp ACTCAGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGCTCCCGCCGGGAGGTTaGTTAGTGCCCGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: TQEAQGGVSLEARRRTLQLPPGG*LVPECG
Trigger: TCCGCATTCGGGCACTAACCAACCTCCCGGCGGGAG...CTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp AACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAAAAGCCGAGACGCCCTaGACGTTCCCTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: NFCLPGSLKQSSHFSLGAKAETP*TFPWAG
Trigger: CCCGGCCCAAGGGAACGTTCAGGGCGTCTCGGCTTT...TGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTAAGGCCGAAAGACCATaGTCAGGCTGCCAGTATGGT +
Preference number: 4 (lower is better)
Translates to: LGWQVTASALGEGPASVAKAERP*SGCQYG
Trigger: ACCATACTGGCAGCCTGATCATGGTCTTTCGGCCTT...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp CACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGACGGGAGTCGCTCGTaGTCTGGTCTCGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: HCNFCLPGSLKQSSHFSLDGSRS*SGLALG
Trigger: GCCCAGTGCGAGACCAGAGCACGAGCGACTCCCGTC...GAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGCCTGGCTGGCCTCGCTaGCCCGGTCTGTGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKPGWPR*PGLCSL
Trigger: GAGCGAGCACAGACCGGGGCAGCGAGGCCAGCCAGG...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCGCTCCTGGCCAACTCTaGATAGGTCGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: LTATSAFQAVSSNPPTSAAPGQL*IGRGNP
Trigger: GGGGTTTCCCCGACCTATTCAGAGTTGGCCAGGAGC...GGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTATAGTCAGGTTCTGGTaGAGACTCTCTTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LGWQVTASALGEGPASVAIVRFW*RLSSWL
Trigger: AAGCCAGGAAGAGAGTCTTCACCAGAACCTGACTAT...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp CAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCGGCTGTGGTGCCTGCTaGTCCTGGCCAACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: QLLPSRQSQAILPLQPRCGCGAC*SWPTLN
Trigger: ATTCAGAGTTGGCCAGGAGCAGCAGGCACCACAGCC...GCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp CACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCACAGGCTGTGGTGCCTaGTGCTCCTGGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: HCNFCLPGSLKQSSHFSLTGCGA*CSWPTL
Trigger: CAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGT...GAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp AACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAACACACAGGCTGTGGTaGCTGCTGCTCCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: NFCLPGSLKQSSHFSLGATHRLW*LLLLAN
Trigger: GTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGT...TGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGAGTCGCTCGTGCTCTaGTCTCGCACTGGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGESLVL*SRTGPS
Trigger: GCTAGGCCCAGTGCGAGACCAGAGCACGAGCGACTC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTATCAGGCTGCCAGTATaGTCAGGTTTTGATGAGAGC +
Preference number: 4 (lower is better)
Translates to: LGWQVTASALGEGPASVAIRLPV*SGFDES
Trigger: GCTCTCATCAAAACCTGACCATACTGGCAGCCTGAT...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTAAAGCCGAGACGCCCTaGACGTTCCCTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICKAETP*TFPWAG
Trigger: CCCGGCCCAAGGGAACGTTCAGGGCGTCTCGGCTTT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGAGGCGGGCGGAGCATaGGGTCAAGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLEAGGA*GQEFET
Trigger: GGTCTCGAACTCTTGACCTCATGCTCCGCCCGCCTC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp ATGTCCATATTTCTAGCATGCACATCAAAACCCTTGGCTGGGTGTGATGGCTCACCTGGCTGGCCTCGCTaGCCCGGTCTGTGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: MSIFLACTSKPLAGCDGSPGWPR*PGLCSL
Trigger: GAGCGAGCACAGACCGGGGCAGCGAGGCCAGCCAGG...TGAGCCATCACACCCAGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTACAGGCTGTGGTGCCTaGTGCTCCTGGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGTGCGA*CSWPTL
Trigger: CAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGT...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTAGAATAGTAGAGCAGTaGCTCCTGTACTGCCATACA +
Preference number: 4 (lower is better)
Translates to: LGWQVTASALGEGPASVARIVEQ*LLYCHT
Trigger: TGTATGGCAGTACAGGAGGCACTGCTCTACTATTCT...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATTCGTCGGCGCCTGGCTaGCCTCGCTGCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNSSAPG*PRCPGL
Trigger: CAGACCGGGGCAGCGAGGCCAGCCAGGCGCCGACGA...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCATCGTCGGCGCCTGGCTaGCCTCGCTGCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: PTSASVQCMLTYHLSHLPSSAPG*PRCPGL
Trigger: CAGACCGGGGCAGCGAGGCCAGCCAGGCGCCGACGA...TGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGAGGCTGAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGACTCCCGCCGGGAGGTTaGTTAGTGCCCGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGLPPGG*LVPECG
Trigger: TCCGCATTCGGGCACTAACCAACCTCCCGGCGGGAG...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp GGCCGAAAGACCATGATCAGGCTGCCAGTATGGTCAGGTTTTGATGAGAGCTCTCGGAGGCAGAAAAGCTaGGGCGGCCGAATAACGAGC +
Preference number: 4 (lower is better)
Translates to: GRKTMIRLPVWSGFDESSRRQKS*GGRITS
Trigger: GCTCGTTATTCGGCCGCCGCAGCTTTTCTGCCTCCG...AGAGCTCTCATCAAAACCTGACCATACTGGCAGCCTGATCATGGTCTTTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTTTGGCCAGGCTGGAGTaGAATGGCGCAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGLARLE*NGAVSA
Trigger: AGCTGAGACTGCGCCATTGCACTCCAGCCTGGCCAA...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTTGGCTTACACATGGCTaGCTTTTTGCTGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LGWQVTASALGEGPASVAWLTHG*LFAVSF
Trigger: AAAAGACACAGCAAAAAGGCAGCCATGTGTAAGCCA...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp CTCACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCAGCTCTCGGTTTCCATaGCTAACGTCTACTCCGGCG +
Preference number: 4 (lower is better)
Translates to: LTATSAFQAVSSNPPTSASSRFP*LTSTPA
Trigger: CGCCGGAGTAGACGTTAGCCATGGAAACCGAGAGCT...GGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGCAGGTAAACTCGGGCTaGGCGCTCCCGCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLQVNSG*ALPPGG
Trigger: ACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTG...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGTGCTGTGTCCTTAGATaGCACAGAGAGGGACAAATC +
Preference number: 4 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGCCVLR*HREGQI
Trigger: GATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCA...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTAGGTATCCAACTTCATaGCTCCACAAAACACTAGGA +
Preference number: 4 (lower is better)
Translates to: LGWQVTASALGEGPASVARYPTS*LHKTLG
Trigger: TCCTAGTGTTTTGTGGAGCCATGAAGTTGGATACCT...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTGCCGCCACCCGGAGCTaGACGGAGCGCGTGCGCGTT +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFAATRS*TERVRV
Trigger: AACGCGCACGCGCTCCGTTCAGCTCCGGGTGGCGGC...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTGATCTCCTGACCTCATaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICDLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCATGAGGTCAGGAGATC...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp ACTCAGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGAGGTACAATCCATCCTaGGGCAAAATTCCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TQEAQGGVSLEARRRTLQRYNPS*GKIPLQ
Trigger: CTGGAGAGGAATTTTGCCTCAGGATGGATTGTACCT...CTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp CAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCACTTCCAGCTGCCATTaGAGTCTGCAGTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: QLLPSRQSQAILPLQPRCTSSCH*SLQYSS
Trigger: ACTGCTGTACTGCAGACTGCAATGGCAGCTGGAAGT...GCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCCAGAAGGCGGAGGTTaGAGTGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLPEGGG*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAACCTCCGCCTTCTGG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGACCCAGGCTGGAGTCTaGAGTGGCGTGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKTQAGV*SGVIMA
Trigger: AGCCATGATCACGCCACTGCAGACTCCAGCCTGGGT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCACCCAGGCTGGAGTCTaGAGTGGCGTGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLTQAGV*SGVIMA
Trigger: AGCCATGATCACGCCACTGCAGACTCCAGCCTGGGT...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTCCTCCTGGCAGAGCATaGAGCCTGGTGCTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICPPGRA*SLVLGY
Trigger: GTAGCCTAGCACCAGGCTGCATGCTCTGCCAGGAGG...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGGTGCCTGCTGCTCCTaGCCAACTCTGAATAGGTCG +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKGACCS*PTLNRS
Trigger: CGACCTATTCAGAGTTGGCCAGGAGCAGCAGGCACC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTCCCTGTCACCCAGGCTaGAGTCTGCAGTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICPCHPG*SLQWRD
Trigger: ATCACGCCACTGCAGACTCCAGCCTGGGTGACAGGG...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTGGAAGCACAGCCTCCTaGCAGAGCATGCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICGSTAS*QSMQPG
Trigger: ACCAGGCTGCATGCTCTGCCAGGAGGCTGTGCTTCC...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTCAAGGTTATTCTATTTaGGAGCAGATACCATGTTCC +
Preference number: 4 (lower is better)
Translates to: LGWQVTASALGEGPASVAQGYSI*EQIPCS
Trigger: GGAACATGGTATCTGCTCCCAAATAGAATAACCTTG...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGCTCCTGGCCAACTCTaGATAGGTCGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCAPGQL*IGRGNP
Trigger: GGGGTTTCCCCGACCTATTCAGAGTTGGCCAGGAGC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTAGGCGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSRRRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTGCAACCTCCGCCT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTGCCAGGAGAATCGCTTaGACCCAGAAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICARRIA*TQKAEV
Trigger: AACCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGGC...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTCCCACCCCAGCCTCCTaGGTAGCTGAGACTATAGGC +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCPTPAS*VAETIG
Trigger: GCCTATAGTCTCAGCTACTCAGGAGGCTGGGGTGGG...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp ACTCAGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGACTTTCTCACACTTCTaGAGGCCGAAAGACCATGAT +
Preference number: 4 (lower is better)
Translates to: TQEAQGGVSLEARRRTLQTFSHF*RPKDHD
Trigger: ATCATGGTCTTTCGGCCTTCAGAAGTGTGAGAAAGT...CTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp GTGTCAGCATGTTTGCAAGCCAATGGGATGGAGTATGATTTAAGAAGCAAGAAACCTGGCTGGCCTCGCTaGCCCGGTCTGTGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: VSACLQANGMEYDLRSKKPGWPR*PGLCSL
Trigger: GAGCGAGCACAGACCGGGGCAGCGAGGCCAGCCAGG...TTTCTTGCTTCTTAAATCATACTCCATCCCATTGGCTTGCAAACATGCTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp GGCCGAAAGACCATGATCAGGCTGCCAGTATGGTCAGGTTTTGATGAGAGCTCTTGGTTAGTGCCCGAATaGGGAGGCAGAAAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: GRKTMIRLPVWSGFDESSWLVPE*GGRKAA
Trigger: CGCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCA...AGAGCTCTCATCAAAACCTGACCATACTGGCAGCCTGATCATGGTCTTTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTGGTTAGTGCCCGAATaGGGAGGCAGAAAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKWLVPE*GGRKAA
Trigger: CGCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCA...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTACACACAGGCTGTGGTaGCTGCTGCTCCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSTHRLW*LLLLAN
Trigger: GTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACCCTGGCCTCCCAAAGTaGCACCGCTCCCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNPGLPK*HRSRPV
Trigger: CACAGGCCGGGAGCGGTGGCACTTTGGGAGGCCAGG...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGCAACTGGTAAATTCATaGTCATCCTCCTCTGCTAAG +
Preference number: 4 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGQLVNS*SSSSAK
Trigger: CTTAGCAGAGGAGGATGAGCATGAATTTACCAGTTG...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp GGCCGAAAGACCATGATCAGGCTGCCAGTATGGTCAGGTTTTGATGAGAGCTCTTTTGGTTCCATACTCTaGCCACCAGGCCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: GRKTMIRLPVWSGFDESSFGSIL*PPGHWG
Trigger: ACCCCAGTGGCCTGGTGGGCAGAGTATGGAACCAAA...AGAGCTCTCATCAAAACCTGACCATACTGGCAGCCTGATCATGGTCTTTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATAGGCCAACATCTGCCTaGCCGGGGACGACGGGAGTC +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNRPTSA*PGTTGV
Trigger: GACTCCCGTCGTCCCCGGCCAGGCAGATGTTGGCCT...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCACTGTCTATGTCTTCTaGGGATTTGGGAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: QLLPSRQSQAILPLQPRCTVYVF*GFGRWQ
Trigger: TTGCCACCTCCCAAATCCCCAGAAGACATAGACAGT...GCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGGGGTTTTGCCAGGCTaGTCTCTAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLGVLPG*SLTPDL
Trigger: GAGGTCAGGAGTTAGAGACCAGCCTGGCAAAACCCC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GGCCGAAAGACCATGATCAGGCTGCCAGTATGGTCAGGTTTTGATGAGAGCTCTGGACTGCCTTTCCTCTaGGTTCAGGGGACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GRKTMIRLPVWSGFDESSGLPFL*VQGTSD
Trigger: GTCTGAAGTCCCCTGAACCCAGAGGAAAGGCAGTCC...AGAGCTCTCATCAAAACCTGACCATACTGGCAGCCTGATCATGGTCTTTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACAAAGCCGAGACGCCCTaGACGTTCCCTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNKAETP*TFPWAG
Trigger: CCCGGCCCAAGGGAACGTTCAGGGCGTCTCGGCTTT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTCAACCAGTAAGAGTCTaGGTCCTGTATCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGQPVRV*VLYPGF
Trigger: GAAGCCTGGATACAGGACTCAGACTCTTACTGGTTG...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCACAGTGCCTGTAGAATaGTCACCAACCCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LTATSAFQAVSSNPPTSATVPVE*SPTLCD
Trigger: ATCACAGAGGGTTGGTGATCATTCTACAGGCACTGT...GGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAGAGGCGGGCGGAGCATaGGGTCAAGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEEAGGA*GQEFET
Trigger: GGTCTCGAACTCTTGACCTCATGCTCCGCCCGCCTC...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGTGTCTGGTGAAGGCTaGTCTCTGCTTCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGVSGEG*SLLPRW
Trigger: CCATCTTGGAAGCAGAGATCAGCCTTCACCAGACAC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGAGTCTGCAGTGGCGTaGTCATGGCTCACTCCCATC +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSESAVA*SWLTPI
Trigger: GATGGGAGTGAGCCATGATCACGCCACTGCAGACTC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGACGGGAGTCGCTCGTaGTCTGGTCTCGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQDGSRS*SGLALG
Trigger: GCCCAGTGCGAGACCAGAGCACGAGCGACTCCCGTC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTTCCCGAGGCGGGCCCTaGCGTAAAGCAGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFSRGGP*RKAGLA
Trigger: GGCCAAGCCTGCTTTACGGCAGGGCCCGCCTCGGGA...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGGCTGTGGTGCCTGCTaGTCCTGGCCAACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSGCGAC*SWPTLN
Trigger: ATTCAGAGTTGGCCAGGAGCAGCAGGCACCACAGCC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGCTGCCATTGCAGTCTaGAGTACAGCAGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGAAIAV*STAVNL
Trigger: CAGGTTGACTGCTGTACTGCAGACTGCAATGGCAGC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGTCCATATTTCTAGCATaGACATCAAAACCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGSIFLA*TSKPLA
Trigger: AGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGA...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp CACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGAGTGTCAGCATGTTTaGAAGCCAATGGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: HCNFCLPGSLKQSSHFSLECQHV*KPMGWS
Trigger: ACTCCATCCCATTGGCTTGCAAACATGCTGACACTC...GAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp AGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCAGAGTCGCTCGTGCTCTaGTCTCGCACTGGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: SLKQSSHFSLGAMYVNISESLVL*SRTGPS
Trigger: GCTAGGCCCAGTGCGAGACCAGAGCACGAGCGACTC...TGATATGTTAACATACATTGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTAGCTCTCGGTTTCCATaGCTAACGTCTACTCCGGCG +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICSSRFP*LTSTPA
Trigger: CGCCGGAGTAGACGTTAGCCATGGAAACCGAGAGCT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTCAGGTAAACTCGGGCTaGGCGCTCCCGCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFQVNSG*ALPPGG
Trigger: ACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTG...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGTGCCTGCTGCTCCTaGCCAACTCTGAATAGGTCG +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCGACCS*PTLNRS
Trigger: CGACCTATTCAGAGTTGGCCAGGAGCAGCAGGCACC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp AACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCATGTCTTCTGGGGATTTaGGAGGTGGCAAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: NFCLPGSLKQSSHFSLGACLLGI*EVAKCS
Trigger: TGAACACTTTGCCACCTCCCAAATCCCCAGAAGACA...TGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCTATCTGGGTCCCCTGTaGCTCTGTCCCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLYLGPL*LCPIIC
Trigger: ACAGATGATGGGACAGAGCCACAGGGGACCCAGATA...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGGAGACACATGGGGTTaGCTATCTGGCTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGGDTWG*LSGFWR
Trigger: TCTCCAAAAGCCAGATAGCCAACCCCATGTGTCTCC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGTAGGAGACAGCTCTTaGAGACACATGGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKVGDSS*RHMGLA
Trigger: AGCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTAC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCTAGTCTCAAACTCCTaGGCTCAGGCGATCCACCTA +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLLVSNS*AQAIHL
Trigger: TAGGTGGATCGCCTGAGCCCAGGAGTTTGAGACTAG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp ACTCAGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGGAGAATAATTCTGTTTaGTTCCATACTCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: TQEAQGGVSLEARRRTLQENNSV*FHTLPT
Trigger: GGTGGGCAGAGTATGGAACCAAACAGAATTATTCTC...CTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp ACTCAGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGCAAATACCAACACATTaGGGGTTAGGGCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: TQEAQGGVSLEARRRTLQQIPTH*GLGLQH
Trigger: ATGTTGAAGCCCTAACCCCCAATGTGTTGGTATTTG...CTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATAGGCGGAGGTTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNRRRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTGCAACCTCCGCCT...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGTTTTTCCTGGCTCTTaGGGCTGGGAATTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKVFPGS*GWEFQD
Trigger: GTCTTGGAATTCCCAGCCTCAAGAGCCAGGAAAAAC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCCCACCCCAGCCTCCTaGGTAGCTGAGACTATAGGC +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNPTPAS*VAETIG
Trigger: GCCTATAGTCTCAGCTACTCAGGAGGCTGGGGTGGG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGCCAGCAAGAATAGAATaGAAAACTGTATTGGCTACA +
Preference number: 4 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGPARIE*KTVLAT
Trigger: TGTAGCCAATACAGTTTTTCATTCTATTCTTGCTGG...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCCTGGCTGGCCTCGCTaGCCCGGTCTGTGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDPGWPR*PGLCSL
Trigger: GAGCGAGCACAGACCGGGGCAGCGAGGCCAGCCAGG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCGGAGGCAGAAAAGCTaGGGCGGCCGAATAACGAGC +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNRRQKS*GGRITS
Trigger: GCTCGTTATTCGGCCGCCGCAGCTTTTCTGCCTCCG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCACGGAGGCAGAAAAGCTaGGGCGGCCGAATAACGAGC +
Preference number: 4 (lower is better)
Translates to: SLKQSSHFSLGAMYVNISRRQKS*GGRITS
Trigger: GCTCGTTATTCGGCCGCCGCAGCTTTTCTGCCTCCG...TGATATGTTAACATACATTGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTTGGTTAGTGCCCGAATaGGGAGGCAGAAAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCWLVPE*GGRKAA
Trigger: CGCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCA...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATACACACAGGCTGTGGTaGCTGCTGCTCCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNTHRLW*LLLLAN
Trigger: GTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGT...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp CTCACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCAACTCTGCGAGCTTCTaGAGTATGACAGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: LTATSAFQAVSSNPPTSANSASF*SMTGCF
Trigger: GAAACATCCTGTCATACTGCAGAAGCTCGCAGAGTT...GGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAGCCGGCGTGGTGGCATaGGCCTTTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEAGVVA*AFNPSY
Trigger: GTAGCTGGGATTAAAGGCGCATGCCACCACGCCGGC...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGAAGATGGCACCTCATTaGTGCATCCTCCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKKMAPH*CILHSG
Trigger: TCCACTGTGGAGGATGCAGCAATGAGGTGCCATCTT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp ACTCAGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTCTGGTTCCTTCTCTTaGTTAACAATCCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TQEAQGGVSLEARRRTLQSGSFS*LTIPSS
Trigger: TGAAGAAGGGATTGTTAAGCAAGAGAAGGAACCAGA...CTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp AATACCATCACATTGGGGTTTAAGACTGTAATATATGAATTCTGGAGAGACACATCGTCGGCGCCTGGCTaGCCTCGCTGCCCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: NTITLGFKTVIYEFWRDTSSAPG*PRCPGL
Trigger: CAGACCGGGGCAGCGAGGCCAGCCAGGCGCCGACGA...TGTGTCTCTCCAGAATTCATATATTACAGTCTTAAACCCCAATGTGATGGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGCTCCCGCCGGGAGGTTaGTTAGTGCCCGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQLPPGG*LVPECG
Trigger: TCCGCATTCGGGCACTAACCAACCTCCCGGCGGGAG...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp ATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTGCAAGCCAGGTAAACTCGGGCTaGGCGCTCCCGCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: MLWFMKSEIMRSVSMFASQVNSG*ALPPGG
Trigger: ACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTG...GCTTGCAAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTGGACGAGTGCAAAGGTaGGCAGGTGCACTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICGRVQR*AGALVY
Trigger: GTAAACAAGTGCACCTGCCCACCTTTGCACTCGTCC...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGCTTATCAGGTTGCTCTaGGGGATATGGACGAGTGCA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKLIRLL*GIWTSA
Trigger: TGCACTCGTCCATATCCCCCAGAGCAACCTGATAAG...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGTCAGCAGCCCAAGATaGAAAAGGCAGCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGVSSPR*KRQLYV
Trigger: GACATAAAGCTGCCTTTTCCATCTTGGGCTGCTGAC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTCCATCTTCTGGCTCCTaGCAACCATCATTCTACTCT +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGPSSGS*QPSFYS
Trigger: AGAGTAGAATGATGGTTGCCAGGAGCCAGAAGATGG...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp CTTCCTAGGTATTCCCTGGGATGTAGGAGACAGCTCTaGGAGACACATGGGGTTGGCTATCTGGCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LPRYSLGCRRQL*ETHGVGYLAFG
Trigger: TCCAAAAGCCAGATAGCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTACATCCCAGGGAATACCTAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp GTGAAGGCTGATCTCTGCTTCCAAGATGGCACCTCATaGCTGCATCCTCCACAGTGGAGGAATGTATGTCCT +
Preference number: 4 (lower is better)
Translates to: VKADLCFQDGTS*LHPPQWRNVCP
Trigger: AGGACATACATTCCTCCACTGTGGAGGATGCAGCAATGAGGTGCCATCTTGGAAGCAGAGATCAGCCTTCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCGAGCTTCTGCAGTATaGCAGGATGTTTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLRASAV*QDVSCN
Trigger: ATTGCAGGAAACATCCTGTCATACTGCAGAAGCTCG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp CTCACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCGCTTTCAGTGCTAGTTaGAACAGTTCTGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LTATSAFQAVSSNPPTSAAFSAS*NSSGFS
Trigger: AGAAAAGCCAGAACTGTTTCAACTAGCACTGAAAGC...GGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACACTCCTGACCTCAAATaGTCCACCCGCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNTPDLK*STRPGL
Trigger: GAGGCCAGGGCGGGTGGATCATTTGAGGTCAGGAGT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGAGAATTAGTGTCTGGTaGAGGCTGATCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKRISVW*RLISAS
Trigger: GGAAGCAGAGATCAGCCTTCACCAGACACTAATTCT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGGGCCAGATCCCTTATaGGTGTTTTGGTATTGTTGG +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKGPDPL*VFWYCW
Trigger: CCAACAATACCAAAACACTCATAAGGGATCTGGCCC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTCCGAACTCTAAAACCTaGTCCATTGCCCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGPNSKT*SIAHKR
Trigger: TCTCTTATGGGCAATGGAGCAGGTTTTAGAGTTCGG...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAGGCTGTGGTGCCTGCTaGTCCTGGCCAACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEGCGAC*SWPTLN
Trigger: ATTCAGAGTTGGCCAGGAGCAGCAGGCACCACAGCC...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp CTCACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCAAACTTCATCAACTCTaGGAGCTTCTGCAGTATGAC +
Preference number: 4 (lower is better)
Translates to: LTATSAFQAVSSNPPTSAKLHQL*ELLQYD
Trigger: GTCATACTGCAGAAGCTCGCAGAGTTGATGAAGTTT...GGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGACAGGGGAGGTTCTGCTaGTTGTACCGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGQGRFC*LYRKIS
Trigger: AGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTG...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCACCTGGCCTCCCAAAGTaGCACCGCTCCCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPPGLPK*HRSRPV
Trigger: CACAGGCCGGGAGCGGTGGCACTTTGGGAGGCCAGG...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAAGGTGTGCACCACCATaGCCGGCTAAGTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGRCAPP*PAKFCI
Trigger: AATACAAAACTTAGCCGGGCATGGTGGTGCACACCT...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAGCAGTCTCAGCTCACTaGAACCTCCGCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEAVSAH*NLRLLD
Trigger: ATCCAGGAGGCGGAGGTTGCAGTGAGCTGAGACTGC...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGTAGAGACGGGTTTTTaGCACGTTGCCCAGGCTAGT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSVETGF*HVAQAS
Trigger: ACTAGCCTGGGCAACGTGGCAAAAACCCGTCTCTAC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp ATGTCCATATTTCTAGCATGCACATCAAAACCCTTGGCTGGGTGTGATGGCTCAGCCGTAAAGCAGGCTTaGCCTAGAGGAAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: MSIFLACTSKPLAGCDGSAVKQA*PRGSRE
Trigger: TTCCCTGCTTCCTCTAGGCCAAGCCTGCTTTACGGC...TGAGCCATCACACCCAGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGAGCTCTCGGTTTCCATaGCTAACGTCTACTCCGGCG +
Preference number: 4 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLSSRFP*LTSTPA
Trigger: CGCCGGAGTAGACGTTAGCCATGGAAACCGAGAGCT...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp CCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCAGGTGCCTGCTGCTCCTaGCCAACTCTGAATAGGTCG +
Preference number: 4 (lower is better)
Translates to: PTSASVQCMLTYHLSHLPGACCS*PTLNRS
Trigger: CGACCTATTCAGAGTTGGCCAGGAGCAGCAGGCACC...TGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGAGGCTGAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGTACAGCAGTCAACCTaGGCACCATTTGGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGVQQST*APFGSS
Trigger: ACTACTACCAAATGGTGCCCAGGTTGACTGCTGTAC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGACTGTCTATGTCTTCTaGGGATTTGGGAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKTVYVF*GFGRWQ
Trigger: TTGCCACCTCCCAAATCCCCAGAAGACATAGACAGT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTTCTCAGGCATCTGAATaGGGGTGTGGAGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCSQASE*GCGEVL
Trigger: GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGA...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTATGGGGTTGGCTATCTaGCTTTTGGAGAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGMGLAI*LLERLC
Trigger: ACAAAGTCTCTCCAAAAGCCAGATAGCCAACCCCAT...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGTAGGAGACAGCTCTTaGAGACACATGGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSVGDSS*RHMGLA
Trigger: AGCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTAC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTAGTTGTTGGGCAAGTTaGAAGCCACCCAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSSCWAS*KPPKWL
Trigger: CAGCCACTTGGGTGGCTTCCAACTTGCCCAACAACT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTATGTCCTCACATGGTaGAAGGGACAGAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKYVLTW*KGQKGK
Trigger: CTTTCCCTTCTGTCCCTTCCACCATGTGAGGACATA...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGATGTATGTCCTCACATaGTGGAAGGGACAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKMYVLT*WKGQKG
Trigger: TCCCTTCTGTCCCTTCCACCATGTGAGGACATACAT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp TGGGATGTAGGAGACAGCTCTTGGAGACACATGGGGTaGGCTATCTGGCTTTTGGAGAGACTTTGTCTACCA +
Preference number: 4 (lower is better)
Translates to: WDVGDSSWRHMG*AIWLLERLCLP
Trigger: TGGTAGACAAAGTCTCTCCAAAAGCCAGATAGCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTACATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCTTGGTTCCAATTTTGTaGCCCATATCACTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: QLLPSRQSQAILPLQPRCLVPIL*PISLKF
Trigger: GAACTTAAGTGATATGGGTCACAAAATTGGAACCAA...GCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp CAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCGAGAAAAGACAATGTTaGGTATACATAAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLLPSRQSQAILPLQPRCEKRQC*VYIKWQ
Trigger: CTGCCACTTTATGTATACTCAACATTGTCTTTTCTC...GCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp GGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGGTTCTGCTGCTTGTACTGTTCTCAGGCATCTaGATGGGGGTGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GEVLKNKSDIPGEVLLLVLFSGI*MGVWRS
Trigger: ACTTCTCCACACCCCCATTCAGATGCCTGAGAACAG...TACAAGCAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR TCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTCTAGGGGGCTCCTACTaGTTTCATTGGAAATTAAGT +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGLGGSY*FHWKLS
Trigger: ACTTAATTTCCAATGAAATCAGTAGGAGCCCCCTAG...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGCTGCCTAACCACCTaGCCACAAGGCGGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASECCLTT*PQGGKR
Trigger: CCTTTTTCCGCCTTGTGGTCAGGTGGTTAGGCAGCA...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATTGCTGCCTAACCACCTaGCCACAAGGCGGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNCCLTT*PQGGKR
Trigger: CCTTTTTCCGCCTTGTGGTCAGGTGGTTAGGCAGCA...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGATCCAGTTTTGGGAAGTaGGAAGATCCTAACTGCATC +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGSSFGK*EDPNCI
Trigger: GATGCAGTTAGGATCTTCTCACTTCCCAAAACTGGA...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGAGAGGACTCTTGCGTaGCCAGTGATGAAAACTGGA +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCERTLA*PVMKTG
Trigger: TCCAGTTTTCATCACTGGTCACGCAAGAGTCCTCTC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTAGAATTAGTGTCTGGTaGAGGCTGATCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICRISVW*RLISAS
Trigger: GGAAGCAGAGATCAGCCTTCACCAGACACTAATTCT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTAGTGATGGAAAGAGTTaGGAGGGACAGGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSSDGKS*EGQATL
Trigger: TAAGGTGGCCTGTCCCTCTCAACTCTTTCCATCACT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTAATATGGAGGACAGCTaGTGCAGTAGCTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCNMEDS*CSSFVP
Trigger: GGGCACAAAGCTACTGCATCAGCTGTCCTCCATATT...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACGGCTGTGGTGCCTGCTaGTCCTGGCCAACTCTGAAT +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNGCGAC*SWPTLN
Trigger: ATTCAGAGTTGGCCAGGAGCAGCAGGCACCACAGCC...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGAACATTCTCTTTCATaGCAGGCCTTTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKEHSLS*QAFWSS
Trigger: ACTGCTCCAAAAGGCCTGGCATGAAAGAGAATGTTC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCATTTGCTGTCAAGCTaGCCTCTGTGTGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLHLLSS*PLCVFL
Trigger: AAGAAAGACACACAGAGGGCAGCTTGACAGCAAATG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGCTAGACATAAAGTCTaGATTTGCTGTCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKARHKV*ICCQAA
Trigger: GGCAGCTTGACAGCAAATGCAGACTTTATGTCTAGC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTGTTGGGGAGGGTTCCTaGATTTCTACTGCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICVGEGS*ISTALC
Trigger: ACAAAGAGCAGTAGAAATGCAGGAACCCTCCCCAAC...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGATTTTCCCTGTCCCTTaGCTATGCAGTATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKIFPVP*LCSIWP
Trigger: TGGCCAAATACTGCATAGGCAAGGGACAGGGAAAAT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTAGGTGTGCACCACCATaGCCGGCTAAGTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICRCAPP*PAKFCI
Trigger: AATACAAAACTTAGCCGGGCATGGTGGTGCACACCT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGCCTGCCTAGCATTGTaGCTGCTGATGTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCACLAL*LLMSVQ
Trigger: TTGAACAGACATCAGCAGGCACAATGCTAGGCAGGC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGTGAAGGCTGATCTCTaGTTCCAAGATGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCVKADL*FQDGTS
Trigger: TGAGGTGCCATCTTGGAAGCAGAGATCAGCCTTCAC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACGCAGTCTCAGCTCACTaGAACCTCCGCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNAVSAH*NLRLLD
Trigger: ATCCAGGAGGCGGAGGTTGCAGTGAGCTGAGACTGC...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTTGGCCAGGCTGGAGTaGAATGGCGCAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNLARLE*NGAVSA
Trigger: AGCTGAGACTGCGCCATTGCACTCCAGCCTGGCCAA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGATGCAGTAGCTTTGTaGCCAGTGATGGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLDAVAL*PVMERV
Trigger: AACTCTTTCCATCACTGGGCACAAAGCTACTGCATC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp GGTGGCCACATTTTTGCTGTGTCCTTAGATGGCACAGAGAGGGACAAATCAAGCAGGTGGCCACATTTTTaGTGTGTCCTTAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: GGHIFAVSLDGTERDKSSRWPHF*CVLRWH
Trigger: GTGCCATCTAAGGACACAGCAAAAATGTGGCCACCT...GCTTGATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCAAAAATGTGGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp AGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCATCAGTCTCGGCTCACTaGAACTTCTGCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLKQSSHFSLGAMYVNISSVSAH*NFCLPG
Trigger: GCCTGGAAGGCAGAAGTTGCAGTGAGCCGAGACTGA...TGATATGTTAACATACATTGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAACAGGTAAACTCGGGCTaGGCGCTCCCGCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKQVNSG*ALPPGG
Trigger: ACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTG...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTGAGAAGTGCATCGGGTaGGGGCAGAGTCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFEKCIG*GQSPKC
Trigger: GCACTTGGGACTCTGCCCCCACCCGATGCACTTCTC...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTACTGTCTATGTCTTCTaGGGATTTGGGAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICTVYVF*GFGRWQ
Trigger: TTGCCACCTCCCAAATCCCCAGAAGACATAGACAGT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTTTCCTAGGTATTCCCTaGGATGTAGGAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICFLGIP*DVGDSS
Trigger: AGAGCTGTCTCCTACATCCCAGGGAATACCTAGGAA...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGAGAAGCCAGGGCATCTaGGTCTGGAGATTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKRSQGI*VWRFLL
Trigger: TAAAAGAAATCTCCAGACCCAGATGCCCTGGCTTCT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTCAGGCTAGAGTACAGTaGCACTATCTCAGTTCACCG +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCQARVQ*HYLSSP
Trigger: CGGTGAACTGAGATAGTGCCACTGTACTCTAGCCTG...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTATGTATGTCCTCACATaGTGGAAGGGACAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICMYVLT*WKGQKG
Trigger: TCCCTTCTGTCCCTTCCACCATGTGAGGACATACAT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTCTCTGCTTCCAAGATaGCACCTCATTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSSLLPR*HLIAAS
Trigger: GGATGCAGCAATGAGGTGCCATCTTGGAAGCAGAGA...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGTTTTGCCAGGCTaGTCTCTAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNGVLPG*SLTPDL
Trigger: GAGGTCAGGAGTTAGAGACCAGCCTGGCAAAACCCC...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGCACACCACCATGCCTaGCTAGGTTTTGTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGAHHHA*LGFVVF
Trigger: AAAAACTACAAAACCTAGCCAGGCATGGTGGTGTGC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCTGGGACTTGGTAGTGTaGGTAGAAGCTCTAAAGGTA +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLWDLVV*VEALKV
Trigger: TACCTTTAGAGCTTCTACCCACACTACCAAGTCCCA...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AATACCATCACATTGGGGTTTAAGACTGTAATATATGAATTCTGGAGAGACACATGCCCACCAGGCCACTaGGGTGGCAGGTCACCGCCA +
Preference number: 4 (lower is better)
Translates to: NTITLGFKTVIYEFWRDTCPPGH*GGRSPP
Trigger: TGGCGGTGACCTGCCACCCCAGTGGCCTGGTGGGCA...TGTGTCTCTCCAGAATTCATATATTACAGTCTTAAACCCCAATGTGATGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CAA 72 bp GTAGCGGCTGCAGCAAAGGGTCACCTGAATCCAGTTTaGGGAAGTGAGAAGATCCTAACTGCATCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VAAAAKGHLNPV*GSEKILTASGF
Trigger: AAAACCAGATGCAGTTAGGATCTTCTCACTTCCCAAAACTGGATTCAGGTGACCCTTTGCTGCAGCCGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTCGAGCTTCTGCAGTATaGCAGGATGTTTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSRASAV*QDVSCN
Trigger: ATTGCAGGAAACATCCTGTCATACTGCAGAAGCTCG...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTACAGTGCCTGTAGAATaGTCACCAACCCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCTVPVE*SPTLCD
Trigger: ATCACAGAGGGTTGGTGATCATTCTACAGGCACTGT...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGCTTTCAGTGCTAGTTaGAACAGTTCTGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLAFSAS*NSSGFS
Trigger: AGAAAAGCCAGAACTGTTTCAACTAGCACTGAAAGC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAACTGTTCTCAGGCATCTaGATGGGGGTGTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASELFSGI*MGVWRS
Trigger: ACTTCTCCACACCCCCATTCAGATGCCTGAGAACAG...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTTCCAGTTTTGGGAAGTaGGAAGATCCTAACTGCATC +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICSSFGK*EDPNCI
Trigger: GATGCAGTTAGGATCTTCTCACTTCCCAAAACTGGA...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGACAGTCAAGAGCTGTaGAAGCCAAATGTTCACATT +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKDSQEL*KPNVHI
Trigger: AATGTGAACATTTGGCTTTCACAGCTCTTGACTGTC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTTCCCCCTTCTCAGCTTaGGTTAGATATAGCAGGATA +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICSPFSA*VRYSRI
Trigger: TATCCTGCTATATCTAACTCAAGCTGAGAAGGGGGA...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp GGTGGCCACATTTTTGCTGTGTCCTTAGATGGCACAGAGAGGGACAAATCAAGCCACAATAGCCTAATTTaGATCGAGGGCCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GGHIFAVSLDGTERDKSSHNSLI*IEGLQE
Trigger: TTCTTGGAGGCCCTCGATTCAAATTAGGCTATTGTG...GCTTGATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCAAAAATGTGGCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTCACAATAGCCTAATTTaGATCGAGGGCCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICHNSLI*IEGLQE
Trigger: TTCTTGGAGGCCCTCGATTCAAATTAGGCTATTGTG...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR TCA 90 bp CACTGCAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCTTGGTTTATGAAGAGTaGAATTATGAGGAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: HCNFCLPGSLKQSSHFSLLVYEE*NYEECQ
Trigger: CTGACACTCCTCATAATTTCACTCTTCATAAACCAA...GAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAGACGGGAGTCGCTCGTaGTCTGGTCTCGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKDGSRS*SGLALG
Trigger: GCCCAGTGCGAGACCAGAGCACGAGCGACTCCCGTC...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGTAGTACACTGTATCTaGACACACACAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCVVHCI*THTGCG
Trigger: ACCACAGCCTGTGTGTGTGCAGATACAGTGTACTAC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAACTTCATCAACTCTaGGAGCTTCTGCAGTATGAC +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLKLHQL*ELLQYD
Trigger: GTCATACTGCAGAAGCTCGCAGAGTTGATGAAGTTT...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGATCCCTATCATATCTTaGTGGGCAAAGTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKIPIIS*WAKFQG
Trigger: TCCTTGGAACTTTGCCCAGCAAGATATGATAGGGAT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTCCTGTCCCTTGCCTATaGAGTATTTGGCCACTTACA +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCPVPCL*SIWPLT
Trigger: TGTAAGTGGCCAAATACTGCATAGGCAAGGGACAGG...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAAGGGAAGAGGATGGCTaGCTCTTTCATCTTTATAAG +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGREEDG*LFHLYK
Trigger: CTTATAAAGATGAAAGAGGCAGCCATCCTCTTCCCT...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTCCAGAAGTTTCCCTTTaGCCTTTTGTAATCATTTCC +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGPEVSL*PFVIIS
Trigger: GGAAATGATTACAAAAGGGCAAAGGGAAACTTCTGG...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTGATGCAGTAGCTTTGTaGCCAGTGATGGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICDAVAL*PVMERV
Trigger: AACTCTTTCCATCACTGGGCACAAAGCTACTGCATC...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGAGTCGCTCGTGCTCTaGTCTCGCACTGGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILESLVL*SRTGPS
Trigger: GCTAGGCCCAGTGCGAGACCAGAGCACGAGCGACTC...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACAGCTCTCGGTTTCCATaGCTAACGTCTACTCCGGCG +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNSSRFP*LTSTPA
Trigger: CGCCGGAGTAGACGTTAGCCATGGAAACCGAGAGCT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GACCTTATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTCTCCCGCCGGGAGGTTaGTTAGTGCCCGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: DLMLWFMKSEIMRSVSMFLPPGG*LVPECG
Trigger: TCCGCATTCGGGCACTAACCAACCTCCCGGCGGGAG...AAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCATAAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp ATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTGCAAGCGAGAAGTGCATCGGGTaGGGGCAGAGTCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: MLWFMKSEIMRSVSMFASEKCIG*GQSPKC
Trigger: GCACTTGGGACTCTGCCCCCACCCGATGCACTTCTC...GCTTGCAAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGTACAGCAGTCAACCTaGGCACCATTTGGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSVQQST*APFGSS
Trigger: ACTACTACCAAATGGTGCCCAGGTTGACTGCTGTAC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCTCATGCCAGGCCTTTTaGAGCAGTATTGAACAAGTA +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLSCQAF*SSIEQV
Trigger: TACTTGTTCAATACTGCTCCAAAAGGCCTGGCATGA...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCATGCCAGGCCTTTTaGAGCAGTATTGAACAAGTA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKSCQAF*SSIEQV
Trigger: TACTTGTTCAATACTGCTCCAAAAGGCCTGGCATGA...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp TATCCCAGGGGAGGTTCTGCTGCTTGTACCGTAAGATTTCTTAAAAGTAGTGGATCTCAGGCATCTGAATaGGGGTGTGGAGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: YPRGGSAACTVRFLKSSGSQASE*GCGEVL
Trigger: GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGA...TCCACTACTTTTAAGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGATTTACATTTGCTCTaGGTAGCGGCTGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSDLHLL*VAAAAK
Trigger: CTTTGCTGCAGCCGCTACCCAGAGCAAATGTAAATC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTTCCTAGGTATTCCCTaGGATGTAGGAGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSFLGIP*DVGDSS
Trigger: AGAGCTGTCTCCTACATCCCAGGGAATACCTAGGAA...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GGTGGCCACATTTTTGCTGTGTCCTTAGATGGCACAGAGAGGGACAAATCAAGCCCAGCCCCACACTTTTaGTGTTCTCTTCAGAATATG +
Preference number: 4 (lower is better)
Translates to: GGHIFAVSLDGTERDKSSPAPHF*CSLQNM
Trigger: CATATTCTGAAGAGAACACCAAAAGTGTGGGGCTGG...GCTTGATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCAAAAATGTGGCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGTACTGTTGATACAATaGCTGTCTCCAATAAAGCAT +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGVLLIQ*LSPIKH
Trigger: ATGCTTTATTGGAGACAGTCATTGTATCAACAGTAC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGATCAAGTGTACTGTTaGTACAATGACTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLDQVYC*YNDCLQ
Trigger: TTGGAGACAGTCATTGTATCAACAGTACACTTGATC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp GAGCTTGTATACTATAACGTTCTTCATCATCGTTTGTGGCATAAAGTAATTCCCGCTCCTGGCCAACTCTaGATAGGTCGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: ELVYYNVLHHRLWHKVIPAPGQL*IGRGNP
Trigger: GGGGTTTCCCCGACCTATTCAGAGTTGGCCAGGAGC...GGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR TCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGATCTCCTGACCTCATaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLDLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCATGAGGTCAGGAGATC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACACTCCTGACCTCAAATaGTCCACCCGCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDTPDLK*STRPGL
Trigger: GAGGCCAGGGCGGGTGGATCATTTGAGGTCAGGAGT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTAGGAATTTAGACAGATaGAGAGAAGCTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSRNLDR*REASGG
Trigger: GCCTCCTGAAGCTTCTCTTCATCTGTCTAAATTCCT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTAGGCATAGTCATAAGTaGAGAAATAAAGAAGCAACG +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGRHSHK*RNKEAT
Trigger: CGTTGCTTCTTTATTTCTTCACTTATGACTATGCCT...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGTGTCTGGTGAAGGCTaGTCTCTGCTTCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQVSGEG*SLLPRW
Trigger: CCATCTTGGAAGCAGAGATCAGCCTTCACCAGACAC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAGAGTCTGCAGTGGCGTaGTCATGGCTCACTCCCATC +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQESAVA*SWLTPI
Trigger: GATGGGAGTGAGCCATGATCACGCCACTGCAGACTC...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTTATCAGACTGGGTCATaGCACACTAAAATGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICYQTGS*HTKMSR
Trigger: TCTGGACATTTTAGTGTGTCATGACCCAGTCTGATA...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AATACCATCACATTGGGGTTTAAGACTGTAATATATGAATTCTGGAGAGACACACGCCAGTGCTCTAGGTaGGGGTCCTGCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NTITLGFKTVIYEFWRDTRQCSR*GSCFCG
Trigger: GCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCG...TGTGTCTCTCCAGAATTCATATATTACAGTCTTAAACCCCAATGTGATGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp GACCTTATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTCAGGCTGGAGTGCAGTaGCACCATCAGTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: DLMLWFMKSEIMRSVSMFQAGVQ*HHQSRL
Trigger: GAGCCGAGACTGATGGTGTCACTGCACTCCAGCCTG...AAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCATAAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCGGAGGCAGAAAAGCTaGGGCGGCCGAATAACGAGC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDRRQKS*GGRITS
Trigger: GCTCGTTATTCGGCCGCCGCAGCTTTTCTGCCTCCG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp GTGTCAGCATGTTTGCAAGCCAATGGGATGGAGTATGATTTAAGAAGCAAGAAATGGTTAGTGCCCGAATaGGGAGGCAGAAAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: VSACLQANGMEYDLRSKKWLVPE*GGRKAA
Trigger: CGCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCA...TTTCTTGCTTCTTAAATCATACTCCATCCCATTGGCTTGCAAACATGCTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTTTCATGAGCCTAGTTTaGTTCTCAAAGAATACAGTC +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGFMSLV*FSKNTV
Trigger: GACTGTATTCTTTGAGAAGCAAACTAGGCTCATGAA...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGCATTTTCTGTATTCTaGCATACCATTCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGAFSVF*HTILKA
Trigger: AGCCTTTAGAATGGTATGGCAGAATACAGAAAATGC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAACAGGCTGTGGTGCCTaGTGCTCCTGGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPTGCGA*CSWPTL
Trigger: CAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGT...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp GAGCTTGTATACTATAACGTTCTTCATCATCGTTTGTGGCATAAAGTAATTCCCACAGGCTGTGGTGCCTaGTGCTCCTGGCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: ELVYYNVLHHRLWHKVIPTGCGA*CSWPTL
Trigger: CAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGT...GGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR GCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACACACACAGGCTGTGGTaGCTGCTGCTCCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDTHRLW*LLLLAN
Trigger: GTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAACTTCCAGCTGCCATTaGAGTCTGCAGTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASETSSCH*SLQYSS
Trigger: ACTGCTGTACTGCAGACTGCAATGGCAGCTGGAAGT...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCCCAGGGGAGGTTCTaGTGCTTGTACCGTAAGATT +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASESQGRF*CLYRKI
Trigger: AATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGA...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGCCGGCGTGGTGGCATaGGCCTTTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLAGVVA*AFNPSY
Trigger: GTAGCTGGGATTAAAGGCGCATGCCACCACGCCGGC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTCTCACAGGTTGCTTCTaGCATATTCTCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSLTGCF*HILSSP
Trigger: AGGAGAAGAGAGAATATGGCAGAAGCAACCTGTGAG...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTTTACAGCAGAAAACATaGACAGGCACTAATAGGAAA +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGLQQKT*TGTNRK
Trigger: TTTCCTATTAGTGCCTGTGCATGTTTTCTGCTGTAA...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTATGAGCCACAGTGCCTaGCTGGCCACAAATAATTTT +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCMSHSA*LATNNF
Trigger: AAAATTATTTGTGGCCAGGCAGGCACTGTGGCTCAT...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCCTCCTGGCAGAGCATaGAGCCTGGTGCTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDPPGRA*SLVLGY
Trigger: GTAGCCTAGCACCAGGCTGCATGCTCTGCCAGGAGG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTGCCGTAAAGCAGGCTTaGCCTAGAGGAAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFAVKQA*PRGSRE
Trigger: TTCCCTGCTTCCTCTAGGCCAAGCCTGCTTTACGGC...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACGAGAAGTGCATCGGGTaGGGGCAGAGTCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDEKCIG*GQSPKC
Trigger: GCACTTGGGACTCTGCCCCCACCCGATGCACTTCTC...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCACCATATGTCTGTACTaGAGATCAAGTGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLTICLY*RSSVLL
Trigger: CAACAGTACACTTGATCTCCAGTACAGACATATGGT...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGATGACCAACACGAATaGAGAAAAGACAATGTTGAG +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLDDQHE*RKDNVE
Trigger: CTCAACATTGTCTTTTCTCCATTCGTGTTGGTCATC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp GGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGGTTCTGCTGCTTGTAGTACAGCAGTCAACCTaGGCACCATTTGGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: GEVLKNKSDIPGEVLLLVVQQST*APFGSS
Trigger: ACTACTACCAAATGGTGCCCAGGTTGACTGCTGTAC...TACAAGCAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCTCTGGCATTAAGCTaGTCCCCCACTTCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQALALS*SPTSVG
Trigger: ACCTACAGAAGTGGGGGACCAGCTTAATGCCAGAGC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACGGACGAGTGCAAAGGTaGGCAGGTGCACTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNGRVQR*AGALVY
Trigger: GTAAACAAGTGCACCTGCCCACCTTTGCACTCGTCC...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTCAGGGCATCTGGGTCTaGAGATTTCTTTTATCAGGA +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCQGIWV*RFLLSG
Trigger: TCCTGATAAAAGAAATCTCCAGACCCAGATGCCCTG...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGCAGATAGAATCATGTaGAAGCCCTTCCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCADRIM*KPFLMK
Trigger: CTTCATCAGGAAGGGCTTCCACATGATTCTATCTGC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCCAAGTGGCTGTCCTTaGAAAAGGGGGAAGATGACA +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNPSGCP*KRGKMT
Trigger: TGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGCTAGTCTCAAACTCCTaGGCTCAGGCGATCCACCTA +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQLVSNS*AQAIHL
Trigger: TAGGTGGATCGCCTGAGCCCAGGAGTTTGAGACTAG...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTACCCTGTCACCCAGGCTaGAGTCTGCAGTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILPCHPG*SLQWRD
Trigger: ATCACGCCACTGCAGACTCCAGCCTGGGTGACAGGG...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTGGAACAGTTTGCTTTaGGCCAGATCCCTTATGAGT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSWNSLL*ARSLMS
Trigger: ACTCATAAGGGATCTGGCCCAAAGCAAACTGTTCCA...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GGCCGAAAGACCATGATCAGGCTGCCAGTATGGTCAGGTTTTGATGAGAGCTCTTTCAGGATGCCTAACTaGTATAAAAGTGTTCCGACT +
Preference number: 4 (lower is better)
Translates to: GRKTMIRLPVWSGFDESSFRMPN*YKSVPT
Trigger: AGTCGGAACACTTTTATACCAGTTAGGCATCCTGAA...AGAGCTCTCATCAAAACCTGACCATACTGGCAGCCTGATCATGGTCTTTCGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGCAAGGTTATTCTATTTaGGAGCAGATACCATGTTCC +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKQGYSI*EQIPCS
Trigger: GGAACATGGTATCTGCTCCCAAATAGAATAACCTTG...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406854.6
3UTR CAA 72 bp AATAACTCAAAAGATCAGTCCAGAGAGGATTTACATTaGCTCTGGGTAGCGGCTGCAGCAAAGGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: NNSKDQSREDLH*LWVAAAAKGHL
Trigger: CAGGTGACCCTTTGCTGCAGCCGCTACCCAGAGCAAATGTAAATCCTCTCTGGACTGATCTTTTGAGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCTTGGTTCCAATTTTGTaGCCCATATCACTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLLVPIL*PISLKF
Trigger: GAACTTAAGTGATATGGGTCACAAAATTGGAACCAA...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAGCTCCTGGCCAACTCTaGATAGGTCGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKAPGQL*IGRGNP
Trigger: GGGGTTTCCCCGACCTATTCAGAGTTGGCCAGGAGC...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTCTTTTGGAGCAGTATTaGACAAGTATCCACACAAGT +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICLLEQY*TSIHTS
Trigger: ACTTGTGTGGATACTTGTTCAATACTGCTCCAAAAG...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGAAAGATTGGCCCACTaGCCTCTAACAGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQERLAH*PLTASG
Trigger: TCCTGAAGCTGTTAGAGGTCAGTGGGCCAATCTTTC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGCCAGGAGAATCGCTTaGACCCAGAAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLARRIA*TQKAEV
Trigger: AACCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGGC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTAGCGAAGGCATAGCTTaGCATTATTATCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICSEGIA*HYYHSE
Trigger: TTCACTGTGATAATAATGTCAAGCTATGCCTTCGCT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGTCTACCATAAGTTTTaGCATGTAGCACTTTCACTA +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLVYHKF*HVALSL
Trigger: TAGTGAAAGTGCTACATGTCAAAACTTATGGTAGAC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTATACACTTATCATATaGTTTAGCCATCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKYTLII*FSHPSP
Trigger: AGGACTGGGATGGCTAAATCATATGATAAGTGTATA...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGACAGTCAAGAGCTGTaGAAGCCAAATGTTCACATT +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCDSQEL*KPNVHI
Trigger: AATGTGAACATTTGGCTTTCACAGCTCTTGACTGTC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGGAAAAGGGGGAAGATaGCATGTGGTAGAGGTACAC +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQGKGGR*HVVEVH
Trigger: GTGTACCTCTACCACATGTCATCTTCCCCCTTTTCC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGCCAGATCCCTTATaGGTGTTTTGGTATTGTTGG +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNGPDPL*VFWYCW
Trigger: CCAACAATACCAAAACACTCATAAGGGATCTGGCCC...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGCATTTTCTGTATTCTaGCATACCATTCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLAFSVF*HTILKA
Trigger: AGCCTTTAGAATGGTATGGCAGAATACAGAAAATGC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGACATGAGAATCAATTATaGCTGATAGAACATTCCTGG +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGHENQL*LIEHSW
Trigger: CCAGGAATGTTCTATCAGGCATAATTGATTCTCATG...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGTATTTTTGCATGGCTaGTGTTCTGTTACTGAGTAT +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGVFLHG*CSVTEY
Trigger: ATACTCAGTAACAGAACAGCAGCCATGCAAAAATAC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGTTGGGGAGGGTTCCTaGATTTCTACTGCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNVGEGS*ISTALC
Trigger: ACAAAGAGCAGTAGAAATGCAGGAACCCTCCCCAAC...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTCCAGTCCTAGGTATTTaGCCAAGAGAAATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSPVLGI*PREMKA
Trigger: AGCTTTCATTTCTCTTGGGCAAATACCTAGGACTGG...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCCATGTTTTCACAAATaGCAGGAGTTCCATTGTTTT +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLPCFHK*QEFHCF
Trigger: AAAACAATGGAACTCCTGGCATTTGTGAAAACATGG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp GGCCGAAAGACCATGATCAGGCTGCCAGTATGGTCAGGTTTTGATGAGAGCTCTATTCTGAAAGTCACATaGTTTTCTGTAACACAGCAG +
Preference number: 4 (lower is better)
Translates to: GRKTMIRLPVWSGFDESSILKVT*FSVTQQ
Trigger: CTGCTGTGTTACAGAAAAGCATGTGACTTTCAGAAT...AGAGCTCTCATCAAAACCTGACCATACTGGCAGCCTGATCATGGTCTTTCGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAATTCTGAAAGTCACATaGTTTTCTGTAACACAGCAG +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGILKVT*FSVTQQ
Trigger: CTGCTGTGTTACAGAAAAGCATGTGACTTTCAGAAT...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR GCA 90 bp GGTGGCCACATTTTTGCTGTGTCCTTAGATGGCACAGAGAGGGACAAATCAAGCAGGTTTTTACCTGTGTaGCAGATCCACAGAAACAAA +
Preference number: 4 (lower is better)
Translates to: GGHIFAVSLDGTERDKSSRFLPV*QIHRNK
Trigger: TTTGTTTCTGTGGATCTGGCACACAGGTAAAAACCT...GCTTGATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCAAAAATGTGGCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp AATACCATCACATTGGGGTTTAAGACTGTAATATATGAATTCTGGAGAGACACACCAGGAGGCGGACGTTaGAGTGGGCCAAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: NTITLGFKTVIYEFWRDTPGGGR*SGPRLC
Trigger: GCACAATCTTGGCCCACTGCAACGTCCGCCTCCTGG...TGTGTCTCTCCAGAATTCATATATTACAGTCTTAAACCCCAATGTGATGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGCTGTTGCCTCAGCGATaGATAGTCATAAATACATAT +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKLLPQR*IVINTY
Trigger: ATATGTATTTATGACTATGCATCGCTGAGGCAACAG...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATTGTCTTCTGGGGATTTaGGAGGTGGCAAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNCLLGI*EVAKCS
Trigger: TGAACACTTTGCCACCTCCCAAATCCCCAGAAGACA...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTTATTCACATGATGAATaGGATGAACCCCGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCYSHDE*DEPRSF
Trigger: AAAGGAGCGGGGTTCATCCCATTCATCATGTGAATA...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAAGCTGCTTCAAGGAATaGTCAAATGTGTCAATTACT +
Preference number: 4 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGSCFKE*SNVSIT
Trigger: AGTAATTGACACATTTGACCATTCCTTGAAGCAGCT...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTTTCTTCACTGTCTTTTaGTTCTCTAATGCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGFFTVF*FSNAFK
Trigger: CTTAAAGGCATTAGAGAACCAAAAGACAGTGAAGAA...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGCACCTTATCCTGAATTaGCATGTCTCCTATAAGAAA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKHLILN*HVSYKK
Trigger: TTTCTTATAGGAGACATGCCAATTCAGGATAAGGTG...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTTTCTTTTGCCTGCTTTaGGCTTATTTTGCTATTCTT +
Preference number: 4 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGFFCLL*AYFAIL
Trigger: AAGAATAGCAAAATAAGCCCAAAGCAGGCAAAAGAA...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAGTCAGCAGCCCAAGATaGAAAAGGCAGCTTTATGTC +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEVSSPR*KRQLYV
Trigger: GACATAAAGCTGCCTTTTCCATCTTGGGCTGCTGAC...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGAAATCTGTTTTTCCTaGCTCTTGAGGCTGGGAATT +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCEICFS*LLRLGI
Trigger: AATTCCCAGCCTCAAGAGCCAGGAAAAACAGATTTC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAGGAAGCACAGCCTCCTaGCAGAGCATGCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKGSTAS*QSMQPG
Trigger: ACCAGGCTGCATGCTCTGCCAGGAGGCTGTGCTTCC...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGTGTTTTGGTATTGTTaGGACTTGGTAGTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSVFWYC*DLVVWV
Trigger: TACCCACACTACCAAGTCCCAACAATACCAAAACAC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp ATGTCCATATTTCTAGCATGCACATCAAAACCCTTGGCTGGGTGTGATGGCTCAATAACATTCCATCCCTaGCCCCTCAAAACTCATGTC +
Preference number: 4 (lower is better)
Translates to: MSIFLACTSKPLAGCDGSITFHP*PLKTHV
Trigger: GACATGAGTTTTGAGGGGCCAGGGATGGAATGTTAT...TGAGCCATCACACCCAGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CAA 72 bp CTTTGGGCCAGATCCCTTATGAGTGTTTTGGTATTGTaGGGACTTGGTAGTGTGGGTAGAAGCTCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LWARSLMSVLVL*GLGSVGRSSKG
Trigger: ACCTTTAGAGCTTCTACCCACACTACCAAGTCCCAACAATACCAAAACACTCATAAGGGATCTGGCCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp AACAGTTTGCTTTGGGCCAGATCCCTTATGAGTGTTTaGGTATTGTTGGGACTTGGTAGTGTGGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: NSLLWARSLMSV*VLLGLGSVGRS
Trigger: GCTTCTACCCACACTACCAAGTCCCAACAATACCAAAACACTCATAAGGGATCTGGCCCAAAGCAAACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp AAACAGGAGAAGCCAACTGCTCCTTTCAACACTGCTTaGAACTCTCCTTACGTAGGTATCCAACTTCATGGC +
Preference number: 4 (lower is better)
Translates to: KQEKPTAPFNTA*NSPYVGIQLHG
Trigger: GCCATGAAGTTGGATACCTACGTAAGGAGAGTTCAAAGCAGTGTTGAAAGGAGCAGTTGGCTTCTCCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGTTTCAGAGTATACCTaGATGCTTTCAGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCVSEYT*MLSVLV
Trigger: AACTAGCACTGAAAGCATTCAGGTATACTCTGAAAC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTCTTTTTCCTTCTGTCTaGAGAATACCCTTTACTATC +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICLFPSV*RIPFTI
Trigger: GATAGTAAAGGGTATTCTTCAGACAGAAGGAAAAAG...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTAACTACTCCAGCCAATaGATGGTAGAAGAGGTATAT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSNYSSQ*MVEEVY
Trigger: ATATACCTCTTCTACCATTCATTGGCTGGAGTAGTT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCAAGCAGTTCACAATTaGGCTGGAGCCAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNQAVHN*AGAKVT
Trigger: TGTTACTTTGGCTCCAGCTCAATTGTGAACTGCTTG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGCACTCGGGATTATTCTaGAAGTCACATGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLHSGLF*KSHAFL
Trigger: CAGAAAAGCATGTGACTTTCAGAATAATCCCGAGTG...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGTAGTACACTGTATCTaGACACACACAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQVVHCI*THTGCG
Trigger: ACCACAGCCTGTGTGTGTGCAGATACAGTGTACTAC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp AATACAAATGTATGTGGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGGCTGCCATTGCAGTCTaGAGTACAGCAGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: NTNVCGEVLKNKSDIPGEAAIAV*STAVNL
Trigger: CAGGTTGACTGCTGTACTGCAGACTGCAATGGCAGC...CTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCCACATACATTTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
CDS-3UTR GCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTACTTCCAGCTGCCATTaGAGTCTGCAGTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFTSSCH*SLQYSS
Trigger: ACTGCTGTACTGCAGACTGCAATGGCAGCTGGAAGT...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp GGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGGTTCTGCTGCTTGTAAAACTTCATCAACTCTaGGAGCTTCTGCAGTATGAC +
Preference number: 4 (lower is better)
Translates to: GEVLKNKSDIPGEVLLLVKLHQL*ELLQYD
Trigger: GTCATACTGCAGAAGCTCGCAGAGTTGATGAAGTTT...TACAAGCAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
CDS-3UTR GCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGAACATTCTCTTTCATaGCAGGCCTTTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNEHSLS*QAFWSS
Trigger: ACTGCTCCAAAAGGCCTGGCATGAAAGAGAATGTTC...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp CCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCAGAACATTCTCTTTCATaGCAGGCCTTTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PTSASVQCMLTYHLSHLPEHSLS*QAFWSS
Trigger: ACTGCTCCAAAAGGCCTGGCATGAAAGAGAATGTTC...TGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGAGGCTGAAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATATTTTCCCTGTCCCTTaGCTATGCAGTATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNIFPVP*LCSIWP
Trigger: TGGCCAAATACTGCATAGGCAAGGGACAGGGAAAAT...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGCCGTAAAGCAGGCTTaGCCTAGAGGAAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILAVKQA*PRGSRE
Trigger: TTCCCTGCTTCCTCTAGGCCAAGCCTGCTTTACGGC...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACGCCGTAAAGCAGGCTTaGCCTAGAGGAAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LTYHLSHLPKFESQVLQNAVKQA*PRGSRE
Trigger: TTCCCTGCTTCCTCTAGGCCAAGCCTGCTTTACGGC...GTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTCAGACAGACACTGAGTaGAGCCCTTGTAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIQTDTE*SPCKEL
Trigger: CAGTTCCTTACAAGGGCTCCACTCAGTGTCTGTCTG...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GTGTCAGCATGTTTGCAAGCCAATGGGATGGAGTATGATTTAAGAAGCAAGAAACAGACAGACACTGAGTaGAGCCCTTGTAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: VSACLQANGMEYDLRSKKQTDTE*SPCKEL
Trigger: CAGTTCCTTACAAGGGCTCCACTCAGTGTCTGTCTG...TTTCTTGCTTCTTAAATCATACTCCATCCCATTGGCTTGCAAACATGCTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TATAACGTTCTTCATCATCGTTTGTGGCATAAAGTAATTCCCATGAAAGATTGGGGTGCCTGCTGCTCCTaGCCAACTCTGAATAGGTCG +
Preference number: 4 (lower is better)
Translates to: YNVLHHRLWHKVIPMKDWGACCS*PTLNRS
Trigger: CGACCTATTCAGAGTTGGCCAGGAGCAGCAGGCACC...CCAATCTTTCATGGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCTGATAGAACATTCCTaGCATCAGAATACAATTTCA +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLLIEHS*HQNTIS
Trigger: TGAAATTGTATTCTGATGCCAGGAATGTTCTATCAG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAGAGGGCACAAATATTaGCCAAATAGTTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: FTELSCSQASEWGCGEVLRGHKY*PNSSFI
Trigger: GATAAAAGAACTATTTGGCCAATATTTGTGCCCTCT...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGATTTACATTTGCTCTaGGTAGCGGCTGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQDLHLL*VAAAAK
Trigger: CTTTGCTGCAGCCGCTACCCAGAGCAAATGTAAATC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATAGGAAGGGAAGAGGATaGCTGCCTCTTTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNRKGRG*LPLSSL
Trigger: TAAAGATGAAAGAGGCAGCCATCCTCTTCCCTTCCT...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCTCCCGGCCTGTGTATaGTATTTTTCTATGGCATGT +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNLPACV*YFSMAC
Trigger: ACATGCCATAGAAAAATACCATACACAGGCCGGGAG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGCATACATAACAACATaGATATGTACTAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKAYITT*ICTRGI
Trigger: TATGCCTCTAGTACATATCCATGTTGTTATGTATGC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGCCACAGTGCCTGCCTaGCCACAAATAATTTTAAAG +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNATVPA*PQIILK
Trigger: CTTTAAAATTATTTGTGGCCAGGCAGGCACTGTGGC...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTAGAAACATCACATCTTaGGGATTATCAGGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCRNITS*GLSGCL
Trigger: AAGGCAACCTGATAATCCCCAAGATGTGATGTTTCT...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTATTTATACCCTTAAGTaGAATTGCTGGATCAGATGG +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICIYTLK*NCWIRW
Trigger: CCATCTGATCCAGCAATTCCACTTAAGGGTATAAAT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAATTTCCTCCATCTTCTaGCTCCTGGCAACCATCATT +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEISSIF*LLATII
Trigger: AATGATGGTTGCCAGGAGCCAGAAGATGGAGGAAAT...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATTGGAACAGTTTGCTTTaGGCCAGATCCCTTATGAGT +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNWNSLL*ARSLMS
Trigger: ACTCATAAGGGATCTGGCCCAAAGCAAACTGTTCCA...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GGTGGCCACATTTTTGCTGTGTCCTTAGATGGCACAGAGAGGGACAAATCAAGCCTGCTAAGATATCCGTaGTTAGTATTCTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: GGHIFAVSLDGTERDKSSLLRYP*LVFFLL
Trigger: CAGTAGAAAGAATACTAACCACGGATATCTTAGCAG...GCTTGATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCAAAAATGTGGCCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CAA 72 bp TGTGTTCATTACTCCAAAGCTGAAACACAGTTGGGGTaGTGTAAGGTGACAGCAGGTGAGTTGGTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: CVHYSKAETQLG*CKVTAGELVKE
Trigger: CTCTTTTACCAACTCACCTGCTGTCACCTTACACAACCCCAACTGTGTTTCAGCTTTGGAGTAATGAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp TTGCTTTGGGCCAGATCCCTTATGAGTGTTTTGGTATaGTTGGGACTTGGTAGTGTGGGTAGAAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LLWARSLMSVLV*LGLGSVGRSSK
Trigger: TTTAGAGCTTCTACCCACACTACCAAGTCCCAACAATACCAAAACACTCATAAGGGATCTGGCCCAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGCTTGGAATGAAATATaGTGCTATAGCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNAWNEI*CYSCSS
Trigger: GCTGGAACAGCTATAGCATCATATTTCATTCCAAGC...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCAGCTTTTAGAAATCTGTaGGAAGCCAGCAAAGTGATG +
Preference number: 4 (lower is better)
Translates to: SLKQSSHFSLGAMYVNISAFRNL*EASKVM
Trigger: CATCACTTTGCTGGCTTCTCACAGATTTCTAAAAGC...TGATATGTTAACATACATTGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGATCAATAATTCTTaGAGGCTAAGCACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEWINNS*RLSTLP
Trigger: TGGGAGAGTGCTTAGCCTTCAAGAATTATTGATCCA...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTGATATGGGAGCACTTTaGGGAGGATGCAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFDMGAL*GGCKVK
Trigger: CTTAACCTTGCATCCTCCTCAAAGTGCTCCCATATC...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAGAGAGGACTCTTGCGTaGCCAGTGATGAAAACTGGA +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQERTLA*PVMKTG
Trigger: TCCAGTTTTCATCACTGGTCACGCAAGAGTCCTCTC...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTAGGCATAGTCATAAGTaGAGAAATAAAGAAGCAACG +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSRHSHK*RNKEAT
Trigger: CGTTGCTTCTTTATTTCTTCACTTATGACTATGCCT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGTCCCCCTTCTCAGCTTaGGTTAGATATAGCAGGATA +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQSPFSA*VRYSRI
Trigger: TATCCTGCTATATCTAACTCAAGCTGAGAAGGGGGA...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAAGTGATGGAAAGAGTTaGGAGGGACAGGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQSDGKS*EGQATL
Trigger: TAAGGTGGCCTGTCCCTCTCAACTCTTTCCATCACT...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AATACCATCACATTGGGGTTTAAGACTGTAATATATGAATTCTGGAGAGACACACTGCTTCTGTGGCTCTaGAGTTCAGTTCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: NTITLGFKTVIYEFWRDTLLLWL*SSVLLP
Trigger: CGGGAGCAGAACTGAACTTCAGAGCCACAGAAGCAG...TGTGTCTCTCCAGAATTCATATATTACAGTCTTAAACCCCAATGTGATGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACCCGAACTCTAAAACCTaGTCCATTGCCCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNPNSKT*SIAHKR
Trigger: TCTCTTATGGGCAATGGAGCAGGTTTTAGAGTTCGG...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGCTGCCATTGCAGTCTaGAGTACAGCAGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLAAIAV*STAVNL
Trigger: CAGGTTGACTGCTGTACTGCAGACTGCAATGGCAGC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCGCTGCCATTGCAGTCTaGAGTACAGCAGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: SVQCMLTYHLSHLPKFESAAIAV*STAVNL
Trigger: CAGGTTGACTGCTGTACTGCAGACTGCAATGGCAGC...GGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp TCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGTACTTAATCGCTGCCATTGCAGTCTaGAGTACAGCAGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: SDTKPMYQSRSYSSRYLIAAIAV*STAVNL
Trigger: CAGGTTGACTGCTGTACTGCAGACTGCAATGGCAGC...GATTAAGTACCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR GCA 90 bp CACTTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGACTTCCAGCTGCCATTaGAGTCTGCAGTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: HFSSDTKPMYQSRSYSSRTSSCH*SLQYSS
Trigger: ACTGCTGTACTGCAGACTGCAATGGCAGCTGGAAGT...CCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACAACTCTGCGAGCTTCTaGAGTATGACAGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNNSASF*SMTGCF
Trigger: GAAACATCCTGTCATACTGCAGAAGCTCGCAGAGTT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTCATGAGAATCAATTATaGCTGATAGAACATTCCTGG +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSHENQL*LIEHSW
Trigger: CCAGGAATGTTCTATCAGGCATAATTGATTCTCATG...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTCAGGGGAGGTTCTGCTaGTTGTACCGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIQGRFC*LYRKIS
Trigger: AGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTG...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TGCTTCCTTCCACTTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATACAGGGGAGGTTCTGCTaGTTGTACCGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: CFLPLFIRYQTNVPVTFIQGRFC*LYRKIS
Trigger: AGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTG...TATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTGGAAGGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR GCA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTAGAAAACACAAAAGCTaGTTCAAGGAATGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICRKHKS*FKEWSN
Trigger: ATTTGACCATTCCTTGAAGCAGCTTTTGTGTTTTCT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCATTCAAGCAATTCTCTTaGCTCAGCCTCCCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPFKQFS*LSLPGS
Trigger: GCTACCCGGGAGGCTGAGGCAAGAGAATTGCTTGAA...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACAGGCGCACACCACCATaGCTGGCTAGGTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDRRTPP*LARFCS
Trigger: ACTACAAAACCTAGCCAGGCATGGTGGTGTGCGCCT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAAGGCGCACACCACCATaGCTGGCTAGGTTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPRRTPP*LARFCS
Trigger: ACTACAAAACCTAGCCAGGCATGGTGGTGTGCGCCT...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCAACTGGTAAATTCATaGTCATCCTCCTCTGCTAAG +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNQLVNS*SSSSAK
Trigger: CTTAGCAGAGGAGGATGAGCATGAATTTACCAGTTG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAACAGACAGACACTGAGTaGAGCCCTTGTAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQQTDTE*SPCKEL
Trigger: CAGTTCCTTACAAGGGCTCCACTCAGTGTCTGTCTG...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATTCATGCCAGGCCTTTTaGAGCAGTATTGAACAAGTA +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNSCQAF*SSIEQV
Trigger: TACTTGTTCAATACTGCTCCAAAAGGCCTGGCATGA...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp TGCTTCCTTCCACTTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATAACTGTCTATGTCTTCTaGGGATTTGGGAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: CFLPLFIRYQTNVPVTFITVYVF*GFGRWQ
Trigger: TTGCCACCTCCCAAATCCCCAGAAGACATAGACAGT...TATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTGGAAGGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTCTTCATCATCGTTTGTaGCATAAAGTAATTCCCATG +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCLHHRL*HKVIPM
Trigger: CATGGGAATTACTTTATGCCACAAACGATGATGAAG...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACTATCTGGGTCCCCTGTaGCTCTGTCCCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDYLGPL*LCPIIC
Trigger: ACAGATGATGGGACAGAGCCACAGGGGACCCAGATA...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTATTCTCTCTTCTCCTaGAAATCCAGTTACGTGTAT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSYSLFS*KSSYVY
Trigger: ATACACGTAACTGGATTTCCAGGAGAAGAGAGAATA...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTTATTCTCTCTTCTCCTaGAAATCCAGTTACGTGTAT +
Preference number: 4 (lower is better)
Translates to: KRTNFTELSCSQASEWGCYSLFS*KSSYVY
Trigger: ATACACGTAACTGGATTTCCAGGAGAAGAGAGAATA...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGTGGCTATCTGGCTTTTaGAGAGACTTTGTCTACCAC +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQWLSGF*RDFVYH
Trigger: GTGGTAGACAAAGTCTCTCCAAAAGCCAGATAGCCA...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACAGTTGTTGGGCAAGTTaGAAGCCACCCAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDSCWAS*KPPKWL
Trigger: CAGCCACTTGGGTGGCTTCCAACTTGCCCAACAACT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTGGGACTTGGTAGTGTaGGTAGAAGCTCTAAAGGTA +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNWDLVV*VEALKV
Trigger: TACCTTTAGAGCTTCTACCCACACTACCAAGTCCCA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATACCAAGTAGTAATGTaGAACAGTTTGCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEYQVVM*NSLLWA
Trigger: GGCCCAAAGCAAACTGTTCCACATTACTACTTGGTA...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp AAGCTCTTTACTGAGGGACAGTCCAGCCCCACACTTTaGGTGTTCTCTTCAGAATATGCTTTCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: KLFTEGQSSPTL*VFSSEYAFSCF
Trigger: AAAACATGAGAAAGCATATTCTGAAGAGAACACCAAAAGTGTGGGGCTGGACTGTCCCTCAGTAAAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACGCTTTTAGAAATCTGTaGGAAGCCAGCAAAGTGATG +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNAFRNL*EASKVM
Trigger: CATCACTTTGCTGGCTTCTCACAGATTTCTAAAAGC...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCAGATCAAGTGTACTGTTaGTACAATGACTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SLKQSSHFSLGAMYVNISDQVYC*YNDCLQ
Trigger: TTGGAGACAGTCATTGTATCAACAGTACACTTGATC...TGATATGTTAACATACATTGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCACAACCAGTAAGAGTCTaGGTCCTGTATCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPQPVRV*VLYPGF
Trigger: GAAGCCTGGATACAGGACTCAGACTCTTACTGGTTG...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp GACCTTATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTCAACCAGTAAGAGTCTaGGTCCTGTATCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: DLMLWFMKSEIMRSVSMFQPVRV*VLYPGF
Trigger: GAAGCCTGGATACAGGACTCAGACTCTTACTGGTTG...AAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCATAAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp CCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCACTTTTGGAGCAGTATTaGACAAGTATCCACACAAGT +
Preference number: 4 (lower is better)
Translates to: PTSASVQCMLTYHLSHLPLLEQY*TSIHTS
Trigger: ACTTGTGTGGATACTTGTTCAATACTGCTCCAAAAG...TGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGAGGCTGAAGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp TATCCCAGGGGAGGTTCTGCTGCTTGTACCGTAAGATTTCTTAAAAGTAGTGGACTTTTGGAGCAGTATTaGACAAGTATCCACACAAGT +
Preference number: 4 (lower is better)
Translates to: YPRGGSAACTVRFLKSSGLLEQY*TSIHTS
Trigger: ACTTGTGTGGATACTTGTTCAATACTGCTCCAAAAG...TCCACTACTTTTAAGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR TCA 90 bp AGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCAGTTTCAGAGTATACCTaGATGCTTTCAGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: SLKQSSHFSLGAMYVNISVSEYT*MLSVLV
Trigger: AACTAGCACTGAAAGCATTCAGGTATACTCTGAAAC...TGATATGTTAACATACATTGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAGTTTCAGAGTATACCTaGATGCTTTCAGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEVSEYT*MLSVLV
Trigger: AACTAGCACTGAAAGCATTCAGGTATACTCTGAAAC...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp GAGCTTGTATACTATAACGTTCTTCATCATCGTTTGTGGCATAAAGTAATTCCCGAAAGATTGGCCCACTaGCCTCTAACAGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ELVYYNVLHHRLWHKVIPERLAH*PLTASG
Trigger: TCCTGAAGCTGTTAGAGGTCAGTGGGCCAATCTTTC...GGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
CDS-3UTR TCA 90 bp AGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGTACTTAATCAGGAAAGATTGGCCCACTaGCCTCTAACAGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RYQTNVPVTFIFFKVLNQERLAH*PLTASG
Trigger: TCCTGAAGCTGTTAGAGGTCAGTGGGCCAATCTTTC...CTGATTAAGTACCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555929.1
ENST00000556360.1
CDS-3UTR TCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATCTGGCATCATAAAATaGGTTGGGGAGGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLSGIIK*VGEGSC
Trigger: GCAGGAACCCTCCCCAACTCATTTTATGATGCCAGA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTATCTGGCATCATAAAATaGGTTGGGGAGGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILSGIIK*VGEGSC
Trigger: GCAGGAACCCTCCCCAACTCATTTTATGATGCCAGA...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAATAGCCAAAATCCCATaGGTTTCTTATCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEIAKIP*VSYQVA
Trigger: AGCAACCTGATAAGAAACTCATGGGATTTTGGCTAT...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATATATGGCTACACTTGTaGACCATAACCACAATCAAG +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNIWLHL*TITTIK
Trigger: CTTGATTGTGGTTATGGTTCACAAGTGTAGCCATAT...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGGAAAAGGGGGAAGATaGCATGTGGTAGAGGTACAC +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLGKGGR*HVVEVH
Trigger: GTGTACCTCTACCACATGTCATCTTCCCCCTTTTCC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTCAAGCAGTTCACAATTaGGCTGGAGCCAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFQAVHN*AGAKVT
Trigger: TGTTACTTTGGCTCCAGCTCAATTGTGAACTGCTTG...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGTTTTTCCTGGCTCTTaGGGCTGGGAATTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLVFPGS*GWEFQD
Trigger: GTCTTGGAATTCCCAGCCTCAAGAGCCAGGAAAAAC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTATCCCAGGGGAGGTTCTaGTGCTTGTACCGTAAGATT +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILSQGRF*CLYRKI
Trigger: AATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGA...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp TTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGTACTCCCAGGGGAGGTTCTaGTGCTTGTACCGTAAGATT +
Preference number: 4 (lower is better)
Translates to: FSSDTKPMYQSRSYSSRYSQGRF*CLYRKI
Trigger: AATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGA...GTACCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR GCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTAGAAAACACAAAAGCTaGTTCAAGGAATGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSRKHKS*FKEWSN
Trigger: ATTTGACCATTCCTTGAAGCAGCTTTTGTGTTTTCT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTCTCACAGGTTGCTTCTaGCATATTCTCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGILTGCF*HILSSP
Trigger: AGGAGAAGAGAGAATATGGCAGAAGCAACCTGTGAG...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACCCAGTCCTAGGTATTTaGCCAAGAGAAATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNPVLGI*PREMKA
Trigger: AGCTTTCATTTCTCTTGGGCAAATACCTAGGACTGG...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAGTGAAGGCTGATCTCTaGTTCCAAGATGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPVKADL*FQDGTS
Trigger: TGAGGTGCCATCTTGGAAGCAGAGATCAGCCTTCAC...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAATTCAAGCAATTCTCTTaGCTCAGCCTCCCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKFKQFS*LSLPGS
Trigger: GCTACCCGGGAGGCTGAGGCAAGAGAATTGCTTGAA...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAGTAGAGACGGGTTTTTaGCACGTTGCCCAGGCTAGT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKVETGF*HVAQAS
Trigger: ACTAGCCTGGGCAACGTGGCAAAAACCCGTCTCTAC...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTAGAATAGTAGAGCAGTaGCTCCTGTACTGCCATACA +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIRIVEQ*LLYCHT
Trigger: TGTATGGCAGTACAGGAGGCACTGCTCTACTATTCT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTACCACAAACCTGTGTaGCAGATCCACAGAAACAAA +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNYHKPV*QIHRNK
Trigger: TTTGTTTCTGTGGATCTGGCACACAGGTTTGTGGTA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAACTAATAACCGTAAGTaGGTTGACATAGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASETNNRK*VDIDEP
Trigger: AGGCTCATCTATGTCAACCCACTTACGGTTATTAGT...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAGATGACCAACACGAATaGAGAAAAGACAATGTTGAG +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEDDQHE*RKDNVE
Trigger: CTCAACATTGTCTTTTCTCCATTCGTGTTGGTCATC...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp CATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACTTCAATGGGTTAGTTAGAGTACAGCAGTCAACCTaGGCACCATTTGGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: HLPKFESQVLQNFNGLVRVQQST*APFGSS
Trigger: ACTACTACCAAATGGTGCCCAGGTTGACTGCTGTAC...TCTAACTAACCCATTGAAGTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp AATACAAATGTATGTGGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGTGTCTTCTGGGGATTTaGGAGGTGGCAAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: NTNVCGEVLKNKSDIPGECLLGI*EVAKCS
Trigger: TGAACACTTTGCCACCTCCCAAATCCCCAGAAGACA...CTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCCACATACATTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTAGATGGGATCCAGATTaGAATGATTTGACAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSRWDPD*NDLTSK
Trigger: TTTACTTGTCAAATCATTCCAATCTGGATCCCATCT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTGTAAGAAGAGAGGTTaGGTTAGGTACATATATTTG +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSCKKRG*VRYIYL
Trigger: CAAATATATGTACCTAACCCAACCTCTCTTCTTACA...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTTCTTCACTGTCTTTTaGTTCTCTAATGCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSFFTVF*FSNAFK
Trigger: CTTAAAGGCATTAGAGAACCAAAAGACAGTGAAGAA...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTCCATTCCTATGACTTaGAATATGGTCAGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSSIPMT*NMVSFD
Trigger: ATCAAAACTGACCATATTCCAAGTCATAGGAATGGA...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGCATCATAAAATGAGTTaGGGAGGGTTCCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQHHKMS*GGFLHF
Trigger: GAAATGCAGGAACCCTCCCCAACTCATTTTATGATG...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCTTATCAGGTTGCTCTaGGGGATATGGACGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDLIRLL*GIWTSA
Trigger: TGCACTCGTCCATATCCCCCAGAGCAACCTGATAAG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTACAGGCTAGAGTACAGTaGCACTATCTCAGTTCACCG +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILQARVQ*HYLSSP
Trigger: CGGTGAACTGAGATAGTGCCACTGTACTCTAGCCTG...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCACCAAGTGGCTGTCCTTaGAAAAGGGGGAAGATGACA +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPPSGCP*KRGKMT
Trigger: TGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGG...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGTCAGGAAGATTCCACTaGCAACTCCTTACTTCTACT +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQSGRFH*QLLTST
Trigger: AGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGA...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATCTCTGCTTCCAAGATaGCACCTCATTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLSLLPR*HLIAAS
Trigger: GGATGCAGCAATGAGGTGCCATCTTGGAAGCAGAGA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGCCACAGTGCCTGCCTaGCCACAAATAATTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIATVPA*PQIILK
Trigger: CTTTAAAATTATTTGTGGCCAGGCAGGCACTGTGGC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGCACTTCAATTCAAACTaGCAGTGTTTCTACTCACAT +
Preference number: 4 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLHFNSN*QCFYSH
Trigger: ATGTGAGTAGAAACACTGCCAGTTTGAATTGAAGTG...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CAA 72 bp GACCTTACCTCCAAGATGCTTATACTCTTAGAAAAGTaGACAGGTACAGATGGCTGTAATTTGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DLTSKMLILLEK*TGTDGCNLKQQ
Trigger: CTGCTGCTTCAAATTACAGCCATCTGTACCTGTCAACTTTTCTAAGAGTATAAGCATCTTGGAGGTAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTGCTTTTAGAAATCTGTaGGAAGCCAGCAAAGTGATG +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFAFRNL*EASKVM
Trigger: CATCACTTTGCTGGCTTCTCACAGATTTCTAAAAGC...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGTACTGTTGATACAATaGCTGTCTCCAATAAAGCAT +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNVLLIQ*LSPIKH
Trigger: ATGCTTTATTGGAGACAGTCATTGTATCAACAGTAC...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCGAGCTTCTGCAGTATaGCAGGATGTTTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDRASAV*QDVSCN
Trigger: ATTGCAGGAAACATCCTGTCATACTGCAGAAGCTCG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp GACCTTATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTCGAGCTTCTGCAGTATaGCAGGATGTTTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: DLMLWFMKSEIMRSVSMFRASAV*QDVSCN
Trigger: ATTGCAGGAAACATCCTGTCATACTGCAGAAGCTCG...AAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCATAAGGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp GTGGATGAGCTTGTATACTATAACGTTCTTCATCATCGTTTGTGGCATAAAGTACGAGCTTCTGCAGTATaGCAGGATGTTTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: VDELVYYNVLHHRLWHKVRASAV*QDVSCN
Trigger: ATTGCAGGAAACATCCTGTCATACTGCAGAAGCTCG...TACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTCATCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
CDS-3UTR TCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACCTTTTGGAGCAGTATTaGACAAGTATCCACACAAGT +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNLLEQY*TSIHTS
Trigger: ACTTGTGTGGATACTTGTTCAATACTGCTCCAAAAG...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACACAGTGCCTGTAGAATaGTCACCAACCCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDTVPVE*SPTLCD
Trigger: ATCACAGAGGGTTGGTGATCATTCTACAGGCACTGT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp GAGCTTGTATACTATAACGTTCTTCATCATCGTTTGTGGCATAAAGTAATTCCCACAGTGCCTGTAGAATaGTCACCAACCCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: ELVYYNVLHHRLWHKVIPTVPVE*SPTLCD
Trigger: ATCACAGAGGGTTGGTGATCATTCTACAGGCACTGT...GGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR TCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGCTTTCAGTGCTAGTTaGAACAGTTCTGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIAFSAS*NSSGFS
Trigger: AGAAAAGCCAGAACTGTTTCAACTAGCACTGAAAGC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAGAAAGATTGGCCCACTaGCCTCTAACAGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKERLAH*PLTASG
Trigger: TCCTGAAGCTGTTAGAGGTCAGTGGGCCAATCTTTC...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TACCAGTCACGTTCATATTCTTCAAGGTACTTAATCAGTTCTCTAAAGTCTTCTGAAAGATTGGCCCACTaGCCTCTAACAGCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: YQSRSYSSRYLISSLKSSERLAH*PLTASG
Trigger: TCCTGAAGCTGTTAGAGGTCAGTGGGCCAATCTTTC...AGAAGACTTTAGAGAACTGATTAAGTACCTTGAAGAATATGAACGTGACTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555929.1
ENST00000556360.1
CDS-3UTR TCA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATATGTGGAGAGGTTTTaGAGAATAAATCGGATATCC +
Preference number: 4 (lower is better)
Translates to: KMAKRTNFTELSCSQASEYVERF*RINRIS
Trigger: GGATATCCGATTTATTCTTCAAAACCTCTCCACATA...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTAAACCTGGCTATGAATaGAATGGAGATATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIKPGYE*NGDMGA
Trigger: TGCTCCCATATCTCCATTTCATTCATAGCCAGGTTT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGAGAAAACCTGGCTATaGATGAAATGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIEKTWL*MKWRYG
Trigger: CCCATATCTCCATTTCATTCATAGCCAGGTTTTCTC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGATATGGCTACACTTGTaGACCATAACCACAATCAAG +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQIWLHL*TITTIK
Trigger: CTTGATTGTGGTTATGGTTCACAAGTGTAGCCATAT...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAAATATGGAGGACAGCTaGTGCAGTAGCTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKNMEDS*CSSFVP
Trigger: GGGCACAAAGCTACTGCATCAGCTGTCCTCCATATT...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACTTTGTCTGCCTTTTCTaGTCTGTTGCCTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDFVCLF*SVASAM
Trigger: CATCGCTGAGGCAACAGATCAGAAAAGGCAGACAAA...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR GCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATTTCATGAGCCTAGTTTaGTTCTCAAAGAATACAGTC +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNFMSLV*FSKNTV
Trigger: GACTGTATTCTTTGAGAAGCAAACTAGGCTCATGAA...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGTAGTACACTGTATCTaGACACACACAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLVVHCI*THTGCG
Trigger: ACCACAGCCTGTGTGTGTGCAGATACAGTGTACTAC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCGTAGTACACTGTATCTaGACACACACAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SVQCMLTYHLSHLPKFESVVHCI*THTGCG
Trigger: ACCACAGCCTGTGTGTGTGCAGATACAGTGTACTAC...GGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAACTTCCAGCTGCCATTaGAGTCTGCAGTACAGCAGT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKTSSCH*SLQYSS
Trigger: ACTGCTGTACTGCAGACTGCAATGGCAGCTGGAAGT...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CACTCTCCCAGTGTAAATTCCCATATTAGAATCATACCCCAGAGAAAACAAGTAAACTCTGCGAGCTTCTaGAGTATGACAGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: HSPSVNSHIRIIPQRKQVNSASF*SMTGCF
Trigger: GAAACATCCTGTCATACTGCAGAAGCTCGCAGAGTT...TACTTGTTTTCTCTGGGGTATGATTCTAATATGGGAATTTACACTGGGAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR GCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCAGGGGAGGTTCTGCTaGTTGTACCGTAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDQGRFC*LYRKIS
Trigger: AGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTTATCTCCTCACAGGTTaGTTCTGCCATATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFYLLTG*FCHILS
Trigger: AGAGAGAATATGGCAGAAGCAACCTGTGAGGAGATA...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTACCTGTCCCTTGCCTATaGAGTATTTGGCCACTTACA +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLPVPCL*SIWPLT
Trigger: TGTAAGTGGCCAAATACTGCATAGGCAAGGGACAGG...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGAATTCCAAGACCAATaGACCAGCAGAATTAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIEFQDQ*TSRISV
Trigger: GACACTAATTCTGCTGGTGCATTGGTCTTGGAATTC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp ATGTCCATATTTCTAGCATGCACATCAAAACCCTTGGCTGGGTGTGATGGCTCAAATAGTCTTTCAGGATaGCTAACTGGTATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: MSIFLACTSKPLAGCDGSNSLSG*LTGIKV
Trigger: CACTTTTATACCAGTTAGGCATCCTGAAAGACTATT...TGAGCCATCACACCCAGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR GCA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGTTTCTTGAAGAATACTaGACTTTTGTAGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLFLEEY*TFVAEQ
Trigger: CTGTTCAGCTACAAAAGTGCAGTATTCTTCAAGAAA...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAGTACAGCAGTCAACCTaGGCACCATTTGGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPVQQST*APFGSS
Trigger: ACTACTACCAAATGGTGCCCAGGTTGACTGCTGTAC...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGGTTCTGCTGCTTGTACTGATAGAACATTCCTaGCATCAGAATACAATTTCA +
Preference number: 4 (lower is better)
Translates to: GEVLKNKSDIPGEVLLLVLIEHS*HQNTIS
Trigger: TGAAATTGTATTCTGATGCCAGGAATGTTCTATCAG...TACAAGCAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTATGTCTTCTGGGGATTTaGGAGGTGGCAAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILCLLGI*EVAKCS
Trigger: TGAACACTTTGCCACCTCCCAAATCCCCAGAAGACA...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp TACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGTACTTAATCAGTTCTGTCTTCTGGGGATTTaGGAGGTGGCAAAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: YQTNVPVTFIFFKVLNQFCLLGI*EVAKCS
Trigger: TGAACACTTTGCCACCTCCCAAATCCCCAGAAGACA...GAACTGATTAAGTACCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR CCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAGGAGAGTCATGGAGATaGGATCCAGATTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQGESWR*DPDWND
Trigger: ATCATTCCAATCTGGATCCCATCTCCATGACTCTCC...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGTCTTGTTTCTTGTGGTaGGAACTTAGGTTATTGTGC +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQSCFLW*ELRLLC
Trigger: GCACAATAACCTAAGTTCCCACCACAAGAAACAAGA...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACTATGTCCTCACATGGTaGAAGGGACAGAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDYVLTW*KGQKGK
Trigger: CTTTCCCTTCTGTCCCTTCCACCATGTGAGGACATA...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGAAATCTGTTTTTCCTaGCTCTTGAGGCTGGGAATT +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIEICFS*LLRLGI
Trigger: AATTCCCAGCCTCAAGAGCCAGGAAAAACAGATTTC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAGCACACCACCATGCCTaGCTAGGTTTTGTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQAHHHA*LGFVVF
Trigger: AAAAACTACAAAACCTAGCCAGGCATGGTGGTGTGC...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp ATGTCCATATTTCTAGCATGCACATCAAAACCCTTGGCTGGGTGTGATGGCTCAACATTTTTAGGTATTTaGTACAAAGGCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: MSIFLACTSKPLAGCDGSTFLGI*YKGIPL
Trigger: AAGTGGGATGCCTTTGTACCAAATACCTAAAAATGT...TGAGCCATCACACCCAGCCAAGGGTTTTGATGTGCATGCTAGAAATATGGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CCA 90 bp AATACCATCACATTGGGGTTTAAGACTGTAATATATGAATTCTGGAGAGACACAGCACATCAAAACCCTTaGCTGGGTGTGATGGCTCAA +
Preference number: 4 (lower is better)
Translates to: NTITLGFKTVIYEFWRDTAHQNP*LGVMAQ
Trigger: TTGAGCCATCACACCCAGCCAAGGGTTTTGATGTGC...TGTGTCTCTCCAGAATTCATATATTACAGTCTTAAACCCCAATGTGATGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTAGCGAAGGCATAGCTTaGCATTATTATCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFSEGIA*HYYHSE
Trigger: TTCACTGTGATAATAATGTCAAGCTATGCCTTCGCT...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGGAAAGGCTGGGTATTaGATTCTAAAATTGCAGATA +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQGKAGY*ILKLQI
Trigger: TATCTGCAATTTTAGAATTCAATACCCAGCCTTTCC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGTGGTTACCCTATAGATaGCACAGCAGTCTTATTTAT +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQWLPYR*HSSLIY
Trigger: ATAAATAAGACTGCTGTGTCATCTATAGGGTAACCA...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTATAGCCAAAATCCCATaGGTTTCTTATCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIIAKIP*VSYQVA
Trigger: AGCAACCTGATAAGAAACTCATGGGATTTTGGCTAT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAAGGAATTTAGACAGATaGAGAGAAGCTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPRNLDR*REASGG
Trigger: GCCTCCTGAAGCTTCTCTTCATCTGTCTAAATTCCT...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACAAGAAGTATTTGAAATaGCCTTACCTCCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNKKYLK*PYLQDA
Trigger: AGCATCTTGGAGGTAAGGTCATTTCAAATACTTCTT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAAATAGGAGTAGGTACTaGTCCATGTTTCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILNRSRY*SMFLSL
Trigger: GAGGGACAGAAACATGGATCAGTACCTACTCCTATT...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACAATAGGAGTAGGTACTaGTCCATGTTTCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDNRSRY*SMFLSL
Trigger: GAGGGACAGAAACATGGATCAGTACCTACTCCTATT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAACACTCGGGATTATTCTaGAAGTCACATGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQHSGLF*KSHAFL
Trigger: CAGAAAAGCATGTGACTTTCAGAATAATCCCGAGTG...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR GCA 90 bp TCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCCCGAACTCTAAAACCTaGTCCATTGCCCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: SVQCMLTYHLSHLPKFESPNSKT*SIAHKR
Trigger: TCTCTTATGGGCAATGGAGCAGGTTTTAGAGTTCGG...GGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAAACTCTGCGAGCTTCTaGAGTATGACAGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILNSASF*SMTGCF
Trigger: GAAACATCCTGTCATACTGCAGAAGCTCGCAGAGTT...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp CACTCTCCCAGTGTAAATTCCCATATTAGAATCATACCCCAGAGAAAACAAGTAAAACTTCATCAACTCTaGGAGCTTCTGCAGTATGAC +
Preference number: 4 (lower is better)
Translates to: HSPSVNSHIRIIPQRKQVKLHQL*ELLQYD
Trigger: GTCATACTGCAGAAGCTCGCAGAGTTGATGAAGTTT...TACTTGTTTTCTCTGGGGTATGATTCTAATATGGGAATTTACACTGGGAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR GCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGCATGAGAATCAATTATaGCTGATAGAACATTCCTGG +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQHENQL*LIEHSW
Trigger: CCAGGAATGTTCTATCAGGCATAATTGATTCTCATG...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR GCA 90 bp GATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGTACTTAATCAGTGAACATTCTCTTTCATaGCAGGCCTTTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: DTKPMYQSRSYSSRYLISEHSLS*QAFWSS
Trigger: ACTGCTCCAAAAGGCCTGGCATGAAAGAGAATGTTC...ACTGATTAAGTACCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR GCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTACATTTGCTGTCAAGCTaGCCTCTGTGTGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILHLLSS*PLCVFL
Trigger: AAGAAAGACACACAGAGGGCAGCTTGACAGCAAATG...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAGCTAGACATAAAGTCTaGATTTGCTGTCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPARHKV*ICCQAA
Trigger: GGCAGCTTGACAGCAAATGCAGACTTTATGTCTAGC...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCAATTTGTTAAGTTTTaGCATATGGCTACACTTGTG +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNQFVKF*HMATLV
Trigger: CACAAGTGTAGCCATATGGCAAAACTTAACAAATTG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAATGAGCCACAGTGCCTaGCTGGCCACAAATAATTTT +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLMSHSA*LATNNF
Trigger: AAAATTATTTGTGGCCAGGCAGGCACTGTGGCTCAT...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCTGATAGAACATTCCTaGCATCAGAATACAATTTCA +
Preference number: 4 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNLIEHS*HQNTIS
Trigger: TGAAATTGTATTCTGATGCCAGGAATGTTCTATCAG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp TATAACGTTCTTCATCATCGTTTGTGGCATAAAGTAATTCCCATGAAAGATTGGACTGTCTATGTCTTCTaGGGATTTGGGAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: YNVLHHRLWHKVIPMKDWTVYVF*GFGRWQ
Trigger: TTGCCACCTCCCAAATCCCCAGAAGACATAGACAGT...CCAATCTTTCATGGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTGCCTTAGAACAAATTaGTACCAGTCTTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNCLRTN*YQSSGN
Trigger: ATTTCCAGAAGACTGGTACCAATTTGTTCTAAGGCA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TATCCCAGGGGAGGTTCTGCTGCTTGTACCGTAAGATTTCTTAAAAGTAGTGGAAGAGGGCACAAATATTaGCCAAATAGTTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: YPRGGSAACTVRFLKSSGRGHKY*PNSSFI
Trigger: GATAAAAGAACTATTTGGCCAATATTTGTGCCCTCT...TCCACTACTTTTAAGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACGGAGAGTCATGGAGATaGGATCCAGATTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDGESWR*DPDWND
Trigger: ATCATTCCAATCTGGATCCCATCTCCATGACTCTCC...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACAGGAAGGGAAGAGGATaGCTGCCTCTTTCATCTTTA +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDRKGRG*LPLSSL
Trigger: TAAAGATGAAAGAGGCAGCCATCCTCTTCCCTTCCT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACATGGGGTTGGCTATCTaGCTTTTGGAGAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDMGLAI*LLERLC
Trigger: ACAAAGTCTCTCCAAAAGCCAGATAGCCAACCCCAT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCAGGGCATCTGGGTCTaGAGATTTCTTTTATCAGGA +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDQGIWV*RFLLSG
Trigger: TCCTGATAAAAGAAATCTCCAGACCCAGATGCCCTG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACAGAAGCCAGGGCATCTaGGTCTGGAGATTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDRSQGI*VWRFLL
Trigger: TAAAAGAAATCTCCAGACCCAGATGCCCTGGCTTCT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACATAATAGCCCAAAACTaGAACCAACAAATGTCCATC +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNIIAQN*NQQMSI
Trigger: GATGGACATTTGTTGGTTCCAGTTTTGGGCTATTAT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGATAATAGCCCAAAACTaGAACCAACAAATGTCCATC +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQIIAQN*NQQMSI
Trigger: GATGGACATTTGTTGGTTCCAGTTTTGGGCTATTAT...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTACTCCCGGCCTGTGTATaGTATTTTTCTATGGCATGT +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLLPACV*YFSMAC
Trigger: ACATGCCATAGAAAAATACCATACACAGGCCGGGAG...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGCAGATAGAATCATGTaGAAGCCCTTCCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLADRIM*KPFLMK
Trigger: CTTCATCAGGAAGGGCTTCCACATGATTCTATCTGC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACATTTATACCCTTAAGTaGAATTGCTGGATCAGATGG +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNIYTLK*NCWIRW
Trigger: CCATCTGATCCAGCAATTCCACTTAAGGGTATAAAT...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAACCATCTTCTGGCTCCTaGCAACCATCATTCTACTCT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKPSSGS*QPSFYS
Trigger: AGAGTAGAATGATGGTTGCCAGGAGCCAGAAGATGG...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAATTTCCTCCATCTTCTaGCTCCTGGCAACCATCATT +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLISSIF*LLATII
Trigger: AATGATGGTTGCCAGGAGCCAGAAGATGGAGGAAAT...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp TTAAACACACTAAACATAGTAATTTTAGACCCTGTGTaGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LNTLNIVILDPV*YSSLSGSPVAL
Trigger: CAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAGGGTCTAAAATTACTATGTTTAGTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp CGTTTTCTACCAAGTAGTAATGTGGAACAGTTTGCTTaGGGCCAGATCCCTTATGAGTGTTTTGGTATTGTT +
Preference number: 4 (lower is better)
Translates to: RFLPSSNVEQFA*GQIPYECFGIV
Trigger: AACAATACCAAAACACTCATAAGGGATCTGGCCCAAAGCAAACTGTTCCACATTACTACTTGGTAGAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACGCTTGGAATGAAATATaGTGCTATAGCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTYHLSHLPKFESQVLQNAWNEI*CYSCSS
Trigger: GCTGGAACAGCTATAGCATCATATTTCATTCCAAGC...GTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTTTGGTTCCAATTTTGTaGCCCATATCACTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFLVPIL*PISLKF
Trigger: GAACTTAAGTGATATGGGTCACAAAATTGGAACCAA...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CCTTCCACTTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCTTTTGGAGCAGTATTaGACAAGTATCCACACAAGT +
Preference number: 4 (lower is better)
Translates to: PSTFHQIPNQCTSHVHILLLEQY*TSIHTS
Trigger: ACTTGTGTGGATACTTGTTCAATACTGCTCCAAAAG...AAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTGGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGCTTTCAGTGCTAGTTaGAACAGTTCTGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILAFSAS*NSSGFS
Trigger: AGAAAAGCCAGAACTGTTTCAACTAGCACTGAAAGC...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTTATGTGGAGAGGTTTTaGAGAATAAATCGGATATCC +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFYVERF*RINRIS
Trigger: GGATATCCGATTTATTCTTCAAAACCTCTCCACATA...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTACTAGGGGGCTCCTACTaGTTTCATTGGAAATTAAGT +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLLGGSY*FHWKLS
Trigger: ACTTAATTTCCAATGAAATCAGTAGGAGCCCCCTAG...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACAAACCTGGCTATGAATaGAATGGAGATATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDKPGYE*NGDMGA
Trigger: TGCTCCCATATCTCCATTTCATTCATAGCCAGGTTT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAGAGAAAACCTGGCTATaGATGAAATGGAGATATGGG +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPEKTWL*MKWRYG
Trigger: CCCATATCTCCATTTCATTCATAGCCAGGTTTTCTC...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTCTTTTTCCTTCTGTCTaGAGAATACCCTTTACTATC +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGILFPSV*RIPFTI
Trigger: GATAGTAAAGGGTATTCTTCAGACAGAAGGAAAAAG...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTGTCTACCATAAGTTTTaGCATGTAGCACTTTCACTA +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFVYHKF*HVALSL
Trigger: TAGTGAAAGTGCTACATGTCAAAACTTATGGTAGAC...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAAACTACTCCAGCCAATaGATGGTAGAAGAGGTATAT +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQNYSSQ*MVEEVY
Trigger: ATATACCTCTTCTACCATTCATTGGCTGGAGTAGTT...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTAAGACAAAACATGACTaGAAAGAGCACCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIKTKHD*KEHLYF
Trigger: AAAGTACAGGTGCTCTTTTCAGTCATGTTTTGTCTT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTATATCAGACTGGGTCATaGCACACTAAAATGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILYQTGS*HTKMSR
Trigger: TCTGGACATTTTAGTGTGTCATGACCCAGTCTGATA...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TATAACGTTCTTCATCATCGTTTGTGGCATAAAGTAATTCCCATGAAAGATTGGAACTCTGCGAGCTTCTaGAGTATGACAGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: YNVLHHRLWHKVIPMKDWNSASF*SMTGCF
Trigger: GAAACATCCTGTCATACTGCAGAAGCTCGCAGAGTT...CCAATCTTTCATGGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
CDS-3UTR GCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAAAACTTCATCAACTCTaGGAGCTTCTGCAGTATGAC +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLKLHQL*ELLQYD
Trigger: GTCATACTGCAGAAGCTCGCAGAGTTGATGAAGTTT...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACATCCCTATCATATCTTaGTGGGCAAAGTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDIPIIS*WAKFQG
Trigger: TCCTTGGAACTTTGCCCAGCAAGATATGATAGGGAT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACAGGGAAGAGGATGGCTaGCTCTTTCATCTTTATAAG +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDREEDG*LFHLYK
Trigger: CTTATAAAGATGAAAGAGGCAGCCATCCTCTTCCCT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTCCTCATTTCTAATATaGTATCTTCCTAGGTATTCC +
Preference number: 4 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNSSFLI*YLPRYS
Trigger: GGAATACCTAGGAAGATAGCATATTAGAAATGAGGA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAACTAATAACCGTAAGTaGGTTGACATAGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQTNNRK*VDIDEP
Trigger: AGGCTCATCTATGTCAACCCACTTACGGTTATTAGT...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp ATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTGCAAGCACCATATGTCTGTACTaGAGATCAAGTGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: MLWFMKSEIMRSVSMFASTICLY*RSSVLL
Trigger: CAACAGTACACTTGATCTCCAGTACAGACATATGGT...GCTTGCAAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TCGGTGCAATGTATGTTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCTCATGCCAGGCCTTTTaGAGCAGTATTGAACAAGTA +
Preference number: 4 (lower is better)
Translates to: SVQCMLTYHLSHLPKFESSCQAF*SSIEQV
Trigger: TACTTGTTCAATACTGCTCCAAAAGGCCTGGCATGA...GGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAACATACATTGCACCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTTGCCTTAGAACAAATTaGTACCAGTCTTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGICLRTN*YQSSGN
Trigger: ATTTCCAGAAGACTGGTACCAATTTGTTCTAAGGCA...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GTGTCAGCATGTTTGCAAGCCAATGGGATGGAGTATGATTTAAGAAGCAAGAAATGCCTTAGAACAAATTaGTACCAGTCTTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: VSACLQANGMEYDLRSKKCLRTN*YQSSGN
Trigger: ATTTCCAGAAGACTGGTACCAATTTGTTCTAAGGCA...TTTCTTGCTTCTTAAATCATACTCCATCCCATTGGCTTGCAAACATGCTGACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTAGCTGCTTCAAGGAATaGTCAAATGTGTCAATTACT +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGISCFKE*SNVSIT
Trigger: AGTAATTGACACATTTGACCATTCCTTGAAGCAGCT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATTCACCCTTACAATTTaGATATGGTCCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLFTLTI*IWSLGS
Trigger: TGACCCCAAGGACCATATCCAAATTGTAAGGGTGAA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACTTCACCCTTACAATTTaGATATGGTCCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDFTLTI*IWSLGS
Trigger: TGACCCCAAGGACCATATCCAAATTGTAAGGGTGAA...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGTCCATTCCTATGACTTaGAATATGGTCAGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQSIPMT*NMVSFD
Trigger: ATCAAAACTGACCATATTCCAAGTCATAGGAATGGA...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCATCATAAAATGAGTTaGGGAGGGTTCCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDHHKMS*GGFLHF
Trigger: GAAATGCAGGAACCCTCCCCAACTCATTTTATGATG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATCAGGAAGATTCCACTaGCAACTCCTTACTTCTACT +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLSGRFH*QLLTST
Trigger: AGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACGTGTTTTGGTATTGTTaGGACTTGGTAGTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDVFWYC*DLVVWV
Trigger: TACCCACACTACCAAGTCCCAACAATACCAAAACAC...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACTACCAAGTAGTAATGTaGAACAGTTTGCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDYQVVM*NSLLWA
Trigger: GGCCCAAAGCAAACTGTTCCACATTACTACTTGGTA...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp CTCTTAGAAAAGTTGACAGGTACAGATGGCTGTAATTaGAAGCAGCAGGTAGGATTCATTGCACCTATTATT +
Preference number: 4 (lower is better)
Translates to: LLEKLTGTDGCN*KQQVGFIAPII
Trigger: AATAATAGGTGCAATGAATCCTACCTGCTGCTTCAAATTACAGCCATCTGTACCTGTCAACTTTTCTAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp TACCTCCCAAAGGCCTCATCTCAAAATACCATCACATaGGGGTTTAAGACTGTAATATATGAATTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: YLPKASSQNTIT*GFKTVIYEFWR
Trigger: TCTCCAGAATTCATATATTACAGTCTTAAACCCCAATGTGATGGTATTTTGAGATGAGGCCTTTGGGAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
3UTR CAA 72 bp AAAATGAGCTCTAATACAAATGTATGTGGAGAGGTTTaGAAGAATAAATCGGATATCCCAGGGGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KMSSNTNVCGEV*KNKSDIPGEVL
Trigger: CAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCCACATACATTTGTATTAGAGCTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR TCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAGCTTGGAATGAAATATaGTGCTATAGCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKAWNEI*CYSCSS
Trigger: GCTGGAACAGCTATAGCATCATATTTCATTCCAAGC...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACTTCAATGGGTTAGTTAGAGTACTGTTGATACAATaGCTGTCTCCAATAAAGCAT +
Preference number: 4 (lower is better)
Translates to: HLPKFESQVLQNFNGLVRVLLIQ*LSPIKH
Trigger: ATGCTTTATTGGAGACAGTCATTGTATCAACAGTAC...TCTAACTAACCCATTGAAGTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR TCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAGATCAAGTGTACTGTTaGTACAATGACTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPDQVYC*YNDCLQ
Trigger: TTGGAGACAGTCATTGTATCAACAGTACACTTGATC...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACGTTTCAGAGTATACCTaGATGCTTTCAGTGCTAGTT +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDVSEYT*MLSVLV
Trigger: AACTAGCACTGAAAGCATTCAGGTATACTCTGAAAC...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR TCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAATGGATCAATAATTCTTaGAGGCTAAGCACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKWINNS*RLSTLP
Trigger: TGGGAGAGTGCTTAGCCTTCAAGAATTATTGATCCA...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp TATAACGTTCTTCATCATCGTTTGTGGCATAAAGTAATTCCCATGAAAGATTGGTGGATCAATAATTCTTaGAGGCTAAGCACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: YNVLHHRLWHKVIPMKDWWINNS*RLSTLP
Trigger: TGGGAGAGTGCTTAGCCTTCAAGAATTATTGATCCA...CCAATCTTTCATGGGAATTACTTTATGCCACAAACGATGATGAAGAACGTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
CDS-3UTR TCA 90 bp ATCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGTACTTAATTGGATCAATAATTCTTaGAGGCTAAGCACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: IRYQTNVPVTFIFFKVLNWINNS*RLSTLP
Trigger: TGGGAGAGTGCTTAGCCTTCAAGAATTATTGATCCA...ATTAAGTACCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555929.1
ENST00000556360.1
CDS-3UTR TCA 90 bp TACCAGTCACGTTCATATTCTTCAAGGTACTTAATCAGTTCTCTAAAGTCTTCTTGGATCAATAATTCTTaGAGGCTAAGCACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: YQSRSYSSRYLISSLKSSWINNS*RLSTLP
Trigger: TGGGAGAGTGCTTAGCCTTCAAGAATTATTGATCCA...AGAAGACTTTAGAGAACTGATTAAGTACCTTGAAGAATATGAACGTGACTGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555929.1
ENST00000556360.1
CDS-3UTR TCA 90 bp GACCTTATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTTGTCAAGTTCTCCTCTaGCCTTATGCTTTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: DLMLWFMKSEIMRSVSMFCQVLL*PYALVY
Trigger: ATAAACCAAAGCATAAGGTCAGAGGAGAACTTGACA...AAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCATAAGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp ATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTGCAAGCTTCATGAGCCTAGTTTaGTTCTCAAAGAATACAGTC +
Preference number: 4 (lower is better)
Translates to: MLWFMKSEIMRSVSMFASFMSLV*FSKNTV
Trigger: GACTGTATTCTTTGAGAAGCAAACTAGGCTCATGAA...GCTTGCAAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp ATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTGCAAGCGCATTTTCTGTATTCTaGCATACCATTCTAAAGGCT +
Preference number: 4 (lower is better)
Translates to: MLWFMKSEIMRSVSMFASAFSVF*HTILKA
Trigger: AGCCTTTAGAATGGTATGGCAGAATACAGAAAATGC...GCTTGCAAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp CATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACTTCAATGGGTTAGTTAGACATGAGAATCAATTATaGCTGATAGAACATTCCTGG +
Preference number: 4 (lower is better)
Translates to: HLPKFESQVLQNFNGLVRHENQL*LIEHSW
Trigger: CCAGGAATGTTCTATCAGGCATAATTGATTCTCATG...TCTAACTAACCCATTGAAGTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR GCA 90 bp CACTTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGCATGAGAATCAATTATaGCTGATAGAACATTCCTGG +
Preference number: 4 (lower is better)
Translates to: HFSSDTKPMYQSRSYSSRHENQL*LIEHSW
Trigger: CCAGGAATGTTCTATCAGGCATAATTGATTCTCATG...CCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR GCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAATATCTCCTCACAGGTTaGTTCTGCCATATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKYLLTG*FCHILS
Trigger: AGAGAGAATATGGCAGAAGCAACCTGTGAGGAGATA...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAGTATTTTTGCATGGCTaGTGTTCTGTTACTGAGTAT +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQVFLHG*CSVTEY
Trigger: ATACTCAGTAACAGAACAGCAGCCATGCAAAAATAC...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAATTACAGCAGAAAACATaGACAGGCACTAATAGGAAA +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQLQQKT*TGTNRK
Trigger: TTTCCTATTAGTGCCTGTGCATGTTTTCTGCTGTAA...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GACCTTATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTACTAATAACCGTAAGTaGGTTGACATAGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: DLMLWFMKSEIMRSVSMFTNNRK*VDIDEP
Trigger: AGGCTCATCTATGTCAACCCACTTACGGTTATTAGT...AAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCATAAGGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAACCATATGTCTGTACTaGAGATCAAGTGTACTGTTG +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLTICLY*RSSVLL
Trigger: CAACAGTACACTTGATCTCCAGTACAGACATATGGT...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp GACCTTATGCTTTGGTTTATGAAGAGTGAAATTATGAGGAGTGTCAGCATGTTTGATGACCAACACGAATaGAGAAAAGACAATGTTGAG +
Preference number: 4 (lower is better)
Translates to: DLMLWFMKSEIMRSVSMFDDQHE*RKDNVE
Trigger: CTCAACATTGTCTTTTCTCCATTCGTGTTGGTCATC...AAACATGCTGACACTCCTCATAATTTCACTCTTCATAAACCAAAGCATAAGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp ACGTTCATATTCTTCAAGGTACTTAATCAGTTCTCTAAAGTCTTCTATTGGACCTCATGCCAGGCCTTTTaGAGCAGTATTGAACAAGTA +
Preference number: 4 (lower is better)
Translates to: TFIFFKVLNQFSKVFYWTSCQAF*SSIEQV
Trigger: TACTTGTTCAATACTGCTCCAAAAGGCCTGGCATGA...GGTCCAATAGAAGACTTTAGAGAACTGATTAAGTACCTTGAAGAATATGAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCATGAGAGGAATATATaGCATGTCCTCTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDHERNI*HVLLFS
Trigger: GGAAAACAAGAGGACATGCCATATATTCCTCTCATG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp TTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACCATGAGAGGAATATATaGCATGTCCTCTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LTYHLSHLPKFESQVLQNHERNI*HVLLFS
Trigger: GGAAAACAAGAGGACATGCCATATATTCCTCTCATG...GTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAATATTCACATGATGAATaGGATGAACCCCGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKYSHDE*DEPRSF
Trigger: AAAGGAGCGGGGTTCATCCCATTCATCATGTGAATA...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTAGATGGGATCCAGATTaGAATGATTTGACAAGTAAA +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGIRWDPD*NDLTSK
Trigger: TTTACTTGTCAAATCATTCCAATCTGGATCCCATCT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTTGTAAGAAGAGAGGTTaGGTTAGGTACATATATTTG +
Preference number: 4 (lower is better)
Translates to: LLSHLLKATSFNTVALGICKKRG*VRYIYL
Trigger: CAAATATATGTACCTAACCCAACCTCTCTTCTTACA...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGATCCTAACTGCATCTaGTTTTTCTTCACCCTTACA +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLDPNCI*FFFTLT
Trigger: TGTAAGGGTGAAGAAAAACCAGATGCAGTTAGGATC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGATCCTAACTGCATCTaGTTTTTCTTCACCCTTACA +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILDPNCI*FFFTLT
Trigger: TGTAAGGGTGAAGAAAAACCAGATGCAGTTAGGATC...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTTATTTTTACTACAGATaGGGTTTCATTGTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFYFYYR*GFIVLA
Trigger: GGCTAACACAATGAAACCCCATCTGTAGTAAAAATA...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCATTCAGGATGCCTAACTaGTATAAAAGTGTTCCGACT +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPFRMPN*YKSVPT
Trigger: AGTCGGAACACTTTTATACCAGTTAGGCATCCTGAA...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406854.6
3UTR CAA 72 bp AAAATTTTCCAAATCTTCAAGTTCTGGTTCCTTCTCTaGCTTAACAATCCCTTCTTCAATCCATCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KIFQIFKFWFLL*LNNPFFNPSLS
Trigger: GGAGAGAGATGGATTGAAGAAGGGATTGTTAAGCAAGAGAAGGAACCAGAACTTGAAGATTTGGAAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGAGAAAAGACAATGTTaGGTATACATAAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILEKRQC*VYIKWQ
Trigger: CTGCCACTTTATGTATACTCAACATTGTCTTTTCTC...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAGAGAAAAGACAATGTTaGGTATACATAAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPEKRQC*VYIKWQ
Trigger: CTGCCACTTTATGTATACTCAACATTGTCTTTTCTC...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp GTGGATGAGCTTGTATACTATAACGTTCTTCATCATCGTTTGTGGCATAAAGTATATGTGGAGAGGTTTTaGAGAATAAATCGGATATCC +
Preference number: 4 (lower is better)
Translates to: VDELVYYNVLHHRLWHKVYVERF*RINRIS
Trigger: GGATATCCGATTTATTCTTCAAAACCTCTCCACATA...TACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTCATCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
CDS-3UTR TCA 90 bp TACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGTACTTAATCAGTTCTATGTGGAGAGGTTTTaGAGAATAAATCGGATATCC +
Preference number: 4 (lower is better)
Translates to: YQTNVPVTFIFFKVLNQFYVERF*RINRIS
Trigger: GGATATCCGATTTATTCTTCAAAACCTCTCCACATA...GAACTGATTAAGTACCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTATGGTTACCCTATAGATaGCACAGCAGTCTTATTTAT +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILWLPYR*HSSLIY
Trigger: ATAAATAAGACTGCTGTGTCATCTATAGGGTAACCA...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTATATACACTTATCATATaGTTTAGCCATCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILYTLII*FSHPSP
Trigger: AGGACTGGGATGGCTAAATCATATGATAAGTGTATA...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAAAGAAGTATTTGAAATaGCCTTACCTCCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILKKYLK*PYLQDA
Trigger: AGCATCTTGGAGGTAAGGTCATTTCAAATACTTCTT...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAAAGACAAAACATGACTaGAAAGAGCACCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPKTKHD*KEHLYF
Trigger: AAAGTACAGGTGCTCTTTTCAGTCATGTTTTGTCTT...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR TCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTACCAGCAAGAATAGAATaGAAAACTGTATTGGCTACA +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILPARIE*KTVLAT
Trigger: TGTAGCCAATACAGTTTTTCATTCTATTCTTGCTGG...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR GCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAACCAGAAGTTTCCCTTTaGCCTTTTGTAATCATTTCC +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKPEVSL*PFVIIS
Trigger: GGAAATGATTACAAAAGGGCAAAGGGAAACTTCTGG...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAACAATTTGTTAAGTTTTaGCATATGGCTACACTTGTG +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQQFVKF*HMATLV
Trigger: CACAAGTGTAGCCATATGGCAAAACTTAACAAATTG...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAGCAGGTAGGATTCATTaGACCTATTATTCATTAAAC +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQAGRIH*TYYSLN
Trigger: GTTTAATGAATAATAGGTGCAATGAATCCTACCTGC...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CCACTTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGCTGATAGAACATTCCTaGCATCAGAATACAATTTCA +
Preference number: 4 (lower is better)
Translates to: PLFIRYQTNVPVTFIFFKLIEHS*HQNTIS
Trigger: TGAAATTGTATTCTGATGCCAGGAATGTTCTATCAG...CTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAACATGAGAGGAATATATaGCATGTCCTCTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKHERNI*HVLLFS
Trigger: GGAAAACAAGAGGACATGCCATATATTCCTCTCATG...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACTGCCTTAGAACAAATTaGTACCAGTCTTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDCLRTN*YQSSGN
Trigger: ATTTCCAGAAGACTGGTACCAATTTGTTCTAAGGCA...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCTTCATCATCGTTTGTaGCATAAAGTAATTCCCATG +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDLHHRL*HKVIPM
Trigger: CATGGGAATTACTTTATGCCACAAACGATGATGAAG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CCA 90 bp TACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGGTACTTAATCAGTTCCTTCATCATCGTTTGTaGCATAAAGTAATTCCCATG +
Preference number: 4 (lower is better)
Translates to: YQTNVPVTFIFFKVLNQFLHHRL*HKVIPM
Trigger: CATGGGAATTACTTTATGCCACAAACGATGATGAAG...GAACTGATTAAGTACCTTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR CCA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAAAGAGGGCACAAATATTaGCCAAATAGTTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQRGHKY*PNSSFI
Trigger: GATAAAAGAACTATTTGGCCAATATTTGTGCCCTCT...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTACACCTTATCCTGAATTaGCATGTCTCCTATAAGAAA +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLHLILN*HVSYKK
Trigger: TTTCTTATAGGAGACATGCCAATTCAGGATAAGGTG...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAAGAAACATCACATCTTaGGGATTATCAGGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKRNITS*GLSGCL
Trigger: AAGGCAACCTGATAATCCCCAAGATGTGATGTTTCT...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCTGCTAAGATATCCGTaGTTAGTATTCTTTCTACTG +
Preference number: 4 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDLLRYP*LVFFLL
Trigger: CAGTAGAAAGAATACTAACCACGGATATCTTAGCAG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR CCA 90 bp TCCACTTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGTTTCAGAGTATACCTaGCAAATCTTTCAACTGATG +
Preference number: 4 (lower is better)
Translates to: STFHQIPNQCTSHVHILQVSEYT*QIFQLM
Trigger: CATCAGTTGAAAGATTTGCCAGGTATACTCTGAAAC...TTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR TCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAGGAAAGGCTGGGTATTaGATTCTAAAATTGCAGATA +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKGKAGY*ILKLQI
Trigger: TATCTGCAATTTTAGAATTCAATACCCAGCCTTTCC...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGCAGGTAGGATTCATTaGACCTATTATTCATTAAAC +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILAGRIH*TYYSLN
Trigger: GTTTAATGAATAATAGGTGCAATGAATCCTACCTGC...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAACCATGTTTTCACAAATaGCAGGAGTTCCATTGTTTT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKPCFHK*QEFHCF
Trigger: AAAACAATGGAACTCCTGGCATTTGTGAAAACATGG...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR GCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAAATAGTCTTTCAGGATaGCTAACTGGTATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILNSLSG*LTGIKV
Trigger: CACTTTTATACCAGTTAGGCATCCTGAAAGACTATT...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACCTGATAGAACATTCCTaGCATCAGAATACAATTTCA +
Preference number: 4 (lower is better)
Translates to: LTYHLSHLPKFESQVLQNLIEHS*HQNTIS
Trigger: TGAAATTGTATTCTGATGCCAGGAATGTTCTATCAG...GTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAACTTCATCATCGTTTGTaGCATAAAGTAATTCCCATG +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKLHHRL*HKVIPM
Trigger: CATGGGAATTACTTTATGCCACAAACGATGATGAAG...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCATATTTTTACTACAGATaGGGTTTCATTGTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPYFYYR*GFIVLA
Trigger: GGCTAACACAATGAAACCCCATCTGTAGTAAAAATA...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTATTTTCTTGTTTCTTGTaGTGGGAACTTAGGTTATTG +
Preference number: 4 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILFSCFL*WELRLL
Trigger: CAATAACCTAAGTTCCCACCACAAGAAACAAGAAAA...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGCATACATAACAACATaGATATGTACTAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLAYITT*ICTRGI
Trigger: TATGCCTCTAGTACATATCCATGTTGTTATGTATGC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
3UTR CAA 72 bp GATTGTCTTTCCATTGACGAATCAATCCATCTAGGCTaGTTGTTTCACTATGGAAAAGCAAATAAAGTAACT +
Preference number: 4 (lower is better)
Translates to: DCLSIDESIHLG*LFHYGKANKVT
Trigger: AGTTACTTTATTTGCTTTTCCATAGTGAAACAACAAGCCTAGATGGATTGATTCGTCAATGGAAAGACAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CCA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAATTCTTTTGCCTGCTTTaGGCTTATTTTGCTATTCTT +
Preference number: 4 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKFFCLL*AYFAIL
Trigger: AAGAATAGCAAAATAAGCCCAAAGCAGGCAAAAGAA...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS CCA 90 bp CTGAACGGAGCGCGTGCGCGTTCGGGGACCTCGTCGGCGCCTGGCTaGCCTCGCTGCCCCGGTCTGTGCTCGCTCCCGAGGCGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LNGARARSGTSSAPG*PRCPGLCSLPRRAL
Trigger: CAGGGCCCGCCTCGGGAGCGAGCACAGACCGGGGCAGCGAGGCCAGCCAGGCGCCGACGAGGTCCCCGAACGCGCACGCGCTCCGTTCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS CCA 90 bp GGAGCTGAACGGAGCGCGTGCGCGTTCGGGGACCTCGTCGGCGCCTaGCTGGCCTCGCTGCCCCGGTCTGTGCTCGCTCCCGAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: GAERSACAFGDLVGA*LASLPRSVLAPEAG
Trigger: GCCCGCCTCGGGAGCGAGCACAGACCGGGGCAGCGAGGCCAGCCAGGCGCCGACGAGGTCCCCGAACGCGCACGCGCTCCGTTCAGCTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS TCA 90 bp CGGTTTCCATGGCTAACGTCTACTCCGGCGGCCGCCACCCGGAGCTaGACGGAGCGCGTGCGCGTTCGGGGACCTCGTCGGCGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: RFPWLTSTPAAATRS*TERVRVRGPRRRLA
Trigger: AGCCAGGCGCCGACGAGGTCCCCGAACGCGCACGCGCTCCGTTCAGCTCCGGGTGGCGGCCGCCGGAGTAGACGTTAGCCATGGAAACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS GCA 90 bp CCCGCCGGGAGGTTGGTTAGTGCCCGAATGCGGAGGCAGAAAAGCTaGGGCGGCCGAATAACGAGCTCACCGCGGCCCCGCCCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: PAGRLVSARMRRQKS*GGRITSSPRPRPGQ
Trigger: CTGGCCCGGGCGGGGCCGCGGTGAGCTCGTTATTCGGCCGCCGCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCAACCTCCCGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS CCA 90 bp GGCCAACATCTGCCTGGCCGGGGACGACGGGAGTCGCTCGTGCTCTaGTCTCGCACTGGGCCTAGCAGAAGCAGCAGCGGGGAAAGCCGA +
Preference number: 5 (lower is better)
Translates to: GQHLPGRGRRESLVL*SRTGPSRSSSGESR
Trigger: TCGGCTTTCCCCGCTGCTGCTTCTGCTAGGCCCAGTGCGAGACCAGAGCACGAGCGACTCCCGTCGTCCCCGGCCAGGCAGATGTTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
CDS CCA 90 bp CGGTCTGTGCTCGCTCCCGAGGCGGGCCCTGCCGTAAAGCAGGCTTaGCCTAGAGGAAGCAGGGAAATAGCGCGCTTCGTTCGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: RSVLAPEAGPAVKQA*PRGSREIARFVRAR
Trigger: CCTGGCGCGAACGAAGCGCGCTATTTCCCTGCTTCCTCTAGGCCAAGCCTGCTTTACGGCAGGGCCCGCCTCGGGAGCGAGCACAGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS CCA 90 bp GAAATAGCGCGCTTCGTTCGCGCCAGGACTAGGCCAACATCTGCCTaGCCGGGGACGACGGGAGTCGCTCGTGCTCTGGTCTCGCACTGG +
Preference number: 5 (lower is better)
Translates to: EIARFVRARTRPTSA*PGTTGVARALVSHW
Trigger: CCAGTGCGAGACCAGAGCACGAGCGACTCCCGTCGTCCCCGGCCAGGCAGATGTTGGCCTAGTCCTGGCGCGAACGAAGCGCGCTATTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS CCA 90 bp CGCGAAGGCATCCCAGGGACCGCATTTTTGCAGGTAAACTCGGGCTaGGCGCTCCCGCCGGGAGGTTGGTTAGTGCCCGAATGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: REGIPGTAFLQVNSG*ALPPGGWLVPECGG
Trigger: GCCTCCGCATTCGGGCACTAACCAACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTGCAAAAATGCGGTCCCTGGGATGCCTTCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS-3UTR CAA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGGCTCCCGCCGGGAGGTaGGTTAGTGCCCGAATGCGG +
Preference number: 5 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGAPAGR*VSARMR
Trigger: CCGCATTCGGGCACTAACCAACCTCCCGGCGGGAGC...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS CCA 90 bp GCATTTTTGCAGGTAAACTCGGGCTGGGCGCTCCCGCCGGGAGGTTaGTTAGTGCCCGAATGCGGAGGCAGAAAAGCTGCGGCGGCCGAA +
Preference number: 5 (lower is better)
Translates to: AFLQVNSGWALPPGG*LVPECGGRKAAAAE
Trigger: TTCGGCCGCCGCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCAACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTGCAAAAATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS-3UTR CAA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGGCCAGGAGGCGGACGTaGCAGTGGGCCAAGATTGTG +
Preference number: 5 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGARRRT*QWAKIV
Trigger: CACAATCTTGGCCCACTGCAACGTCCGCCTCCTGGC...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGCTCCCGCCGGGAGGTaGGTTAGTGCCCGAATGCGG +
Preference number: 5 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGAPAGR*VSARMR
Trigger: CCGCATTCGGGCACTAACCAACCTCCCGGCGGGAGC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS TCA 90 bp TCTGCACACACACAGGCTGTGGTGCCTGCTGCTCCTGGCCAACTCTaGATAGGTCGGGGAAACCCCACCAAGAACACAGGAAGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: SAHTQAVVPAAPGQL*IGRGNPTKNTGRVK
Trigger: TTTCACCCTTCCTGTGTTCTTGGTGGGGTTTCCCCGACCTATTCAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGTGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS CCA 90 bp GTACACTGTATCTGCACACACACAGGCTGTGGTGCCTGCTGCTCCTaGCCAACTCTGAATAGGTCGGGGAAACCCCACCAAGAACACAGG +
Preference number: 5 (lower is better)
Translates to: VHCICTHTGCGACCS*PTLNRSGKPHQEHR
Trigger: CCTGTGTTCTTGGTGGGGTTTCCCCGACCTATTCAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGTGTGCAGATACAGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS-3UTR CAA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGCTCCCGCCGGGAGGTaGGTTAGTGCCCGAATGCGG +
Preference number: 5 (lower is better)
Translates to: KRTNFTELSCSQASEWGCAPAGR*VSARMR
Trigger: CCGCATTCGGGCACTAACCAACCTCCCGGCGGGAGC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTCACATGGCTGCCTTTTaGCTGTGTCTTTTTGTAGCA +
Preference number: 5 (lower is better)
Translates to: LGWQVTASALGEGPASVAHMAAF*LCLFVA
Trigger: TGCTACAAAAAGACACAGCAAAAAGGCAGCCATGTG...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTCCCTCCCCTACTTCCTaGGAGAGTCTTGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGPSPTS*ESLGLQ
Trigger: CTGGAGACCAAGACTCTCCAAGGAAGTAGGGGAGGG...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTGCAAGGTTATTCTATTaGGGAGCAGATACCATGTTC +
Preference number: 5 (lower is better)
Translates to: LGWQVTASALGEGPASVAARLFY*GADTMF
Trigger: GAACATGGTATCTGCTCCCAAATAGAATAACCTTGC...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS GCA 90 bp GTAGTAGTACACTGTATCTGCACACACACAGGCTGTGGTGCCTGCTaGTCCTGGCCAACTCTGAATAGGTCGGGGAAACCCCACCAAGAA +
Preference number: 5 (lower is better)
Translates to: VVVHCICTHTGCGAC*SWPTLNRSGKPHQE
Trigger: TTCTTGGTGGGGTTTCCCCGACCTATTCAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGTGTGCAGATACAGTGTACTACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS GCA 90 bp TTGGTAGTAGTACACTGTATCTGCACACACACAGGCTGTGGTGCCTaGTGCTCCTGGCCAACTCTGAATAGGTCGGGGAAACCCCACCAA +
Preference number: 5 (lower is better)
Translates to: LVVVHCICTHTGCGA*CSWPTLNRSGKPHQ
Trigger: TTGGTGGGGTTTCCCCGACCTATTCAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGTGTGCAGATACAGTGTACTACTACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS GCA 90 bp TACAGCAGTCAACCTGGGCACCATTTGGTAGTAGTACACTGTATCTaGACACACACAGGCTGTGGTGCCTGCTGCTCCTGGCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: YSSQPGHHLVVVHCI*THTGCGACCSWPTL
Trigger: CAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGTGTGCAGATACAGTGTACTACTACCAAATGGTGCCCAGGTTGACTGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS GCA 90 bp TACAGCAGTCAACCTGGGCACCATTTGGTAGTAGTACACTGTATCTaGACACACACAGGCTGTGGTGCCTGCTGCTCCTGGCCAACTCAG +
Preference number: 5 (lower is better)
Translates to: YSSQPGHHLVVVHCI*THTGCGACCSWPTQ
Trigger: CTGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGTGTGTGCAGATACAGTGTACTACTACCAAATGGTGCCCAGGTTGACTGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554534.5
CDS-3UTR CAA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGCCCTGAACGTTCCCTaGGGCCGGGCCTTTACGCAA +
Preference number: 5 (lower is better)
Translates to: KRTNFTELSCSQASEWGCALNVP*GRAFTQ
Trigger: TTGCGTAAAGGCCCGGCCCAAGGGAACGTTCAGGGC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317623.8
CDS-3UTR CAA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCCAGGGACCGCATTTTaGCAGGTAAACTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FTELSCSQASEWGCGEVLPGTAF*QVNSGW
Trigger: CCAGCCCGAGTTTACCTGCAAAAATGCGGTCCCTGG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAAGCCAGGAGAATCGCTaGAACCCAGAAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGSQENR*NPEGGG
Trigger: ACCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGGCT...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGCCAGGAATGAGAAATTaGACAGTCTCAGCACCAGTA +
Preference number: 5 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGPGMRN*TVSAPV
Trigger: TACTGGTGCTGAGACTGTCAAATTTCTCATTCCTGG...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp CTGGGGTGGCAGGTCACCGCCAGTGCTCTAGGTGAGGGTCCTGCTTCTGTGGCTCTGTCACCCAATGGTTaGATGATTTTTAATCCATGG +
Preference number: 5 (lower is better)
Translates to: LGWQVTASALGEGPASVALSPNG*MIFNPW
Trigger: CCATGGATTAAAAATCATCAAACCATTGGGTGACAG...AGCCACAGAAGCAGGACCCTCACCTAGAGCACTGGCGGTGACCTGCCACCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS GCA 90 bp AAGTGGGTTGACATAGATGAGCCTCCAAGGCCGAACTCTAAAACCTaGTCCATTGCCCATAAGAGAAGTGCATCGGGTGGGGGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: KWVDIDEPPRPNSKT*SIAHKRSASGGGRV
Trigger: GACTCTGCCCCCACCCGATGCACTTCTCTTATGGGCAATGGAGCAGGTTTTAGAGTTCGGCCTTGGAGGCTCATCTATGTCAACCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
CDS-3UTR CAA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGGCCCTGAACGTTCCCTaGGGCCGGGCCTTTACGCAA +
Preference number: 5 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLALNVP*GRAFTQ
Trigger: TTGCGTAAAGGCCCGGCCCAAGGGAACGTTCAGGGC...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCTGTAGGAGACAGCTCTaGGAGACACATGGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: FTELSCSQASEWGCGEVLCRRQL*ETHGVG
Trigger: GCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTACA...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGATAAGTATCCTGTGTTaGGAAAGTCGCAGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGISILC*ESRSLC
Trigger: ACAGAGACTGCGACTTTCCAAACACAGGATACTTAT...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp CAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCCTAAAACCTGCTCCATaGCCCATAAGAGAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: QLLPSRQSQAILPLQPRCLKPAP*PIREVH
Trigger: ATGCACTTCTCTTATGGGCAATGGAGCAGGTTTTAG...GCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp AACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCACAACCTGGGCACCATTaGGTAGTAGTACACTGTATC +
Preference number: 5 (lower is better)
Translates to: NFCLPGSLKQSSHFSLGAQPGHH*VVVHCI
Trigger: GATACAGTGTACTACTACCAAATGGTGCCCAGGTTG...TGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp ACTCAGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGCAGTATGGTCAGGTTTaGATGAGAGCTCTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: TQEAQGGVSLEARRRTLQQYGQV*MRALFF
Trigger: AAAGAAGAGAGCTCTCATCAAAACCTGACCATACTG...CTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp AGGAGGCTCAGGGAGGAGTATCACTTGAAGCCAGGAGGCGGACGTTGCAGTGGGCACATTTTTAGGTATTaGGTACAAAGGCATCCCACT +
Preference number: 5 (lower is better)
Translates to: RRLREEYHLKPGGGRCSGHIFRY*VQRHPT
Trigger: AGTGGGATGCCTTTGTACCAAATACCTAAAAATGTG...CCCACTGCAACGTCCGCCTCCTGGCTTCAAGTGATACTCCTCCCTGAGCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp TCTCACCTTCATAAACTACCTCCCAGAGGCCCATCTCCAAATACCAACACATTGCCAGGGACCGCATTTTaGCAGGTAAACTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SHLHKLPPRGPSPNTNTLPGTAF*QVNSGW
Trigger: CCAGCCCGAGTTTACCTGCAAAAATGCGGTCCCTGG...CAATGTGTTGGTATTTGGAGATGGGCCTCTGGGAGGTAGTTTATGAAGGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCATGTCTTCTGGGGATTaGGGAGGTGGCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: FTELSCSQASEWGCGEVLMSSGD*GGGKVF
Trigger: GAACACTTTGCCACCTCCCAAATCCCCAGAAGACAT...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp AACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCACTCATCTCCTTCATTTaGGAACTGGGCATACAGCTA +
Preference number: 5 (lower is better)
Translates to: NFCLPGSLKQSSHFSLGALISFI*ELGIQL
Trigger: TAGCTGTATGCCCAGTTCCAAAATGAAGGAGATGAG...TGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTTGTAGGAGACAGCTCTaGGAGACACATGGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: KRTNFTELSCSQASEWGCCRRQL*ETHGVG
Trigger: GCCAACCCCATGTGTCTCCAAGAGCTGTCTCCTACA...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAGAAACACAGTTGGGGTaGTGTAAGGTGACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGETQLG*CKVTAG
Trigger: ACCTGCTGTCACCTTACACAACCCCAACTGTGTTTC...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTAGTGCCTGCCTAGCATaGTGCCTGCTGATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICSACLA*CLLMSV
Trigger: AACAGACATCAGCAGGCACAATGCTAGGCAGGCACT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGCTGATGCAGTAGCTTaGTGCCCAGTGATGGAAAGA +
Preference number: 5 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKADAVA*CPVMER
Trigger: TCTTTCCATCACTGGGCACAAAGCTACTGCATCAGC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGTGGAACAGTTTGCTTaGGGCCAGATCCCTTATGAG +
Preference number: 5 (lower is better)
Translates to: FTELSCSQASEWGCGEVLVEQFA*GQIPYE
Trigger: CTCATAAGGGATCTGGCCCAAAGCAAACTGTTCCAC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAACCAGGGACCGCATTTTaGCAGGTAAACTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASEPGTAF*QVNSGW
Trigger: CCAGCCCGAGTTTACCTGCAAAAATGCGGTCCCTGG...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CAACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCCTTCATGAGCCTAGTTaGCTTCTCAAAGAATACAGT +
Preference number: 5 (lower is better)
Translates to: QLLPSRQSQAILPLQPRCLHEPS*LLKEYS
Trigger: ACTGTATTCTTTGAGAAGCAAACTAGGCTCATGAAG...GCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGATGTTTTTCCTGGCTCTaGAGGCTGGGAATTCCAAGA +
Preference number: 5 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGCFSWL*RLGIPR
Trigger: TCTTGGAATTCCCAGCCTCAAGAGCCAGGAAAAACA...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGATGGTATTGTTGGGACTaGGTAGTGTGGGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGWYCWD*VVWVEA
Trigger: AGCTTCTACCCACACTACCAAGTCCCAACAATACCA...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AACTTCTGCCTTCCAGGCAGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAGAATACAGTCACAGTTaGCACATCCTTCGGATAAAA +
Preference number: 5 (lower is better)
Translates to: NFCLPGSLKQSSHFSLGAEYSHS*HILRIK
Trigger: TTTTATCCGAAGGATGTGCAAACTGTGACTGTATTC...TGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACTGCCTGGAAGGCAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGACTCATCTCCTTCATTTaGGAACTGGGCATACAGCTA +
Preference number: 5 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGLISFI*ELGIQL
Trigger: TAGCTGTATGCCCAGTTCCAAAATGAAGGAGATGAG...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGCACCTGAATCCAGTTTaGGGAAGTGAGAAGATCCTA +
Preference number: 5 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKHLNPV*GSEKIL
Trigger: TAGGATCTTCTCACTTCCCAAAACTGGATTCAGGTG...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAACCCAAGTGGCTGTCCTaGGAAAAGGGGGAAGATGAC +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASEPKWLS*EKGEDD
Trigger: GTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGG...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGACAGATGGCTGTAATTaGAAGCAGCAGGTAGGATTC +
Preference number: 5 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKTDGCN*KQQVGF
Trigger: GAATCCTACCTGCTGCTTCAAATTACAGCCATCTGT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAACAGATGGCTGTAATTaGAAGCAGCAGGTAGGATTC +
Preference number: 5 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGTDGCN*KQQVGF
Trigger: GAATCCTACCTGCTGCTTCAAATTACAGCCATCTGT...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGAGTGTTTTGGTATTGTaGGGACTTGGTAGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKSVLVL*GLGSVG
Trigger: ACCCACACTACCAAGTCCCAACAATACCAAAACACT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp GGTGGCCACATTTTTGCTGTGTCCTTAGATGGCACAGAGAGGGACAAATCAAGCCCAAATACCAACACATaGGGGGTTAGGGCTTCAACA +
Preference number: 5 (lower is better)
Translates to: GGHIFAVSLDGTERDKSSPNTNT*GVRAST
Trigger: TGTTGAAGCCCTAACCCCCAATGTGTTGGTATTTGG...GCTTGATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCAAAAATGTGGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGCCTTTTCTGATCTGTaGCCTCAGCGATGCATAGTC +
Preference number: 5 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSAFSDL*PQRCIV
Trigger: GACTATGCATCGCTGAGGCAACAGATCAGAAAAGGC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS TCA 90 bp CTGTCCATGATGTCAAAAGCACAGTCACGGCAAACAGTAAGAGTCTaGGTCCTGTATCCAGGCTTCTGTTCCACCATATGTCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: LSMMSKAQSRQTVRV*VLYPGFCSTICLYW
Trigger: CCAGTACAGACATATGGTGGAACAGAAGCCTGGATACAGGACTCAGACTCTTACTGTTTGCCGTGACTGTGCTTTTGACATCATGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483571.5
CDS-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTTTTCTTCCAGTACATTaGAGGCCTTCTCTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGFLPVH*RPSLLN
Trigger: ATTCAGAAGAGAAGGCCTCAAATGTACTGGAAGAAA...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATTGGAGACACATGGGGTaGGCTATCTGGCTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNWRHMG*AIWLLE
Trigger: CTCCAAAAGCCAGATAGCCAACCCCATGTGTCTCCA...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTCACTTGCACTGGGCCTaGAAAGAAAGGAATTTAGAC +
Preference number: 5 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICHLHWA*KERNLD
Trigger: GTCTAAATTCCTTTCTTTCAAGGCCCAGTGCAAGTG...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGAAACATCACATCTaGGGGATTATCAGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: FTELSCSQASEWGCGEVLKKHHI*GIIRLP
Trigger: AGGCAACCTGATAATCCCCAAGATGTGATGTTTCTT...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGAAAGAAACATCACATCTaGGGGATTATCAGGTTGCCT +
Preference number: 5 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGKKHHI*GIIRLP
Trigger: AGGCAACCTGATAATCCCCAAGATGTGATGTTTCTT...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGGCAAGGTTATTCTATTaGGGAGCAGATACCATGTTC +
Preference number: 5 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKARLFY*GADTMF
Trigger: GAACATGGTATCTGCTCCCAAATAGAATAACCTTGC...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR CAA 90 bp GGTGGCCACATTTTTGCTGTGTCCTTAGATGGCACAGAGAGGGACAAATCAAGCTCCAGCCCCACACTTTaGGTGTTCTCTTCAGAATAT +
Preference number: 5 (lower is better)
Translates to: GGHIFAVSLDGTERDKSSSSPTL*VFSSEY
Trigger: ATATTCTGAAGAGAACACCAAAAGTGTGGGGCTGGA...GCTTGATTTGTCCCTCTCTGTGCCATCTAAGGACACAGCAAAAATGTGGCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp AGTCTCAAGCAATCCTCCCACTTCAGCCTCGGTGCAATGTATGTTAACATATCAGGAGTGTCAGCATGTTaGCAAGCCAATGGGATGGAG +
Preference number: 5 (lower is better)
Translates to: SLKQSSHFSLGAMYVNISGVSAC*QANGME
Trigger: CTCCATCCCATTGGCTTGCAAACATGCTGACACTCC...TGATATGTTAACATACATTGCACCGAGGCTGAAGTGGGAGGATTGCTTGAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS TCA 90 bp CTGGGCATACAGCTAGTCCTCCACTCTGCGGGTAAGCATACTAAGTaGGAATGTGAACAACTGAACTCCATGAGAGGAATATATGGCATG +
Preference number: 5 (lower is better)
Translates to: LGIQLVLHSAGKHTK*ECEQLNSMRGIYGM
Trigger: CATGCCATATATTCCTCTCATGGAGTTCAGTTGTTCACATTCTCACTTAGTATGCTTACCCGCAGAGTGGAGGACTAGCTGTATGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS-3UTR CAA 90 bp CATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACTTCAATGGGTTAGTTAGACCAGGGACCGCATTTTaGCAGGTAAACTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HLPKFESQVLQNFNGLVRPGTAF*QVNSGW
Trigger: CCAGCCCGAGTTTACCTGCAAAAATGCGGTCCCTGG...TCTAACTAACCCATTGAAGTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGACAATAGCCTGGGAATaGCTTTTAGAAATCTGTGAG +
Preference number: 5 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKTIAWE*LLEICE
Trigger: CTCACAGATTTCTAAAAGCAATTCCCAGGCTATTGT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCTTCATGAGCCTAGTTaGCTTCTCAAAGAATACAGT +
Preference number: 5 (lower is better)
Translates to: FTELSCSQASEWGCGEVLLHEPS*LLKEYS
Trigger: ACTGTATTCTTTGAGAAGCAAACTAGGCTCATGAAG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCTTTCTTCCAGTACATTaGAGGCCTTCTCTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: FTELSCSQASEWGCGEVLFLPVH*RPSLLN
Trigger: ATTCAGAAGAGAAGGCCTCAAATGTACTGGAAGAAA...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTGGACTAGGAGCCATATaGTCTATTCCAAATAAACTA +
Preference number: 5 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGGLGAI*SIPNKL
Trigger: TAGTTTATTTGGAATAGACAATATGGCTCCTAGTCC...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCGTTCTTCATCATCGTTaGTGGCATAAAGTAATTCCC +
Preference number: 5 (lower is better)
Translates to: FTELSCSQASEWGCGEVLVLHHR*WHKVIP
Trigger: GGGAATTACTTTATGCCACAAACGATGATGAAGAAC...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTTTATCTCCTCACAGGTaGCTTCTGCCATATTCTCTC +
Preference number: 5 (lower is better)
Translates to: KRTNFTELSCSQASEWGCLSPHR*LLPYSL
Trigger: GAGAGAATATGGCAGAAGCAACCTGTGAGGAGATAA...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTGCTTTTGGAGAGACTTaGTCTACCACAAGAATAGAG +
Preference number: 5 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICAFGET*STTRIE
Trigger: CTCTATTCTTGTGGTAGACAAAGTCTCTCCAAAAGC...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp GTTGGAAGCCACCCAAGTGGCTGTCCTTGGAAAAGGGGGAAGATGACATGTGGTTTTCTTTTGCCTGCTTaGGGCTTATTTTGCTATTCT +
Preference number: 5 (lower is better)
Translates to: VGSHPSGCPWKRGKMTCGFLLPA*GLFCYS
Trigger: AGAATAGCAAAATAAGCCCAAAGCAGGCAAAAGAAA...ACCACATGTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGGTGGCTTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGTGACAGCAGGTGAGTaGGTAAAAGAGTTAGCAGAA +
Preference number: 5 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSVTAGE*VKELAE
Trigger: TTCTGCTAACTCTTTTACCAACTCACCTGCTGTCAC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGTGACAGCAGGTGAGTaGGTAAAAGAGTTAGCAGAA +
Preference number: 5 (lower is better)
Translates to: KRTNFTELSCSQASEWGCVTAGE*VKELAE
Trigger: TTCTGCTAACTCTTTTACCAACTCACCTGCTGTCAC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTACAAGCAGTTCACAATaGAGCTGGAGCCAAAGTAAC +
Preference number: 5 (lower is better)
Translates to: KRTNFTELSCSQASEWGCTSSSQ*SWSQSN
Trigger: GTTACTTTGGCTCCAGCTCAATTGTGAACTGCTTGT...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTAGTGTTTTGGTATTGTaGGGACTTGGTAGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSSVLVL*GLGSVG
Trigger: ACCCACACTACCAAGTCCCAACAATACCAAAACACT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAACAACCTGGGCACCATTaGGTAGTAGTACACTGTATC +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASEQPGHH*VVVHCI
Trigger: GATACAGTGTACTACTACCAAATGGTGCCCAGGTTG...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGATGTCTTCTGGGGATTaGGGAGGTGGCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQMSSGD*GGGKVF
Trigger: GAACACTTTGCCACCTCCCAAATCCCCAGAAGACAT...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp GTATGTGGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGGTTCTGCTGCTCATCTCCTTCATTTaGGAACTGGGCATACAGCTA +
Preference number: 5 (lower is better)
Translates to: VCGEVLKNKSDIPGEVLLLISFI*ELGIQL
Trigger: TAGCTGTATGCCCAGTTCCAAAATGAAGGAGATGAG...CAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCCACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CAA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAAGCCAGGAGAATCGCTaGAACCCAGAAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPSQENR*NPEGGG
Trigger: ACCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGGCT...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCCCTCCCCTACTTCCTaGGAGAGTCTTGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDPSPTS*ESLGLQ
Trigger: CTGGAGACCAAGACTCTCCAAGGAAGTAGGGGAGGG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CATTGCTGCATCCTCCACAGTGGAGGAATGTATGTCCTCACATGGTGGAAGGGATCTGGGAATGCAGACTaGTCTTTTCTCATTTTAGTT +
Preference number: 5 (lower is better)
Translates to: HCCILHSGGMYVLTWWKGSGNAD*SFLILV
Trigger: AACTAAAATGAGAAAAGACAAGTCTGCATTCCCAGA...TCCCTTCCACCATGTGAGGACATACATTCCTCCACTGTGGAGGATGCAGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGAGTTGTGCACATATTTaGTCAGATGACTCTAGGATT +
Preference number: 5 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKSCAHI*SDDSRI
Trigger: AATCCTAGAGTCATCTGACAAAATATGTGCACAACT...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCCTAATTGGCATGAAGTaGTGCACATATTTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: FTELSCSQASEWGCGEVLLIGMK*CTYFVR
Trigger: TCTGACAAAATATGTGCACAACTTCATGCCAATTAG...GAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTCTTTTTCTTGTTTCTaGTGGTGGGAACTTAGGTTA +
Preference number: 5 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKSFSCF*WWELRL
Trigger: TAACCTAAGTTCCCACCACAAGAAACAAGAAAAAGA...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAACCCAAGTGGCTGTCCTaGGAAAAGGGGGAAGATGAC +
Preference number: 5 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQPKWLS*EKGEDD
Trigger: GTCATCTTCCCCCTTTTCCAAGGACAGCCACTTGGG...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGAGTAGAGATGGGGTTTaGCCAGGCTGGTCTCTAACT +
Preference number: 5 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQSRDGV*PGWSLT
Trigger: AGTTAGAGACCAGCCTGGCAAAACCCCATCTCTACT...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp GGCCGAAAGACCATGATCAGGCTGCCAGTATGGTCAGGTTTTGATGAGAGCTCTTTGGCTACATATTTCTaGCCAGGAATGAGAAATTTG +
Preference number: 5 (lower is better)
Translates to: GRKTMIRLPVWSGFDESSLATYF*PGMRNL
Trigger: CAAATTTCTCATTCCTGGCAAGAAATATGTAGCCAA...AGAGCTCTCATCAAAACCTGACCATACTGGCAGCCTGATCATGGTCTTTCGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp CCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGGAGAAGTTGGCTACATATTTCTaGCCAGGAATGAGAAATTTG +
Preference number: 5 (lower is better)
Translates to: PTLRSLAVLRHLNGGVEKLATYF*PGMRNL
Trigger: CAAATTTCTCATTCCTGGCAAGAAATATGTAGCCAA...CTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS GCA 90 bp GCATTAATCCACCTGAAAGTGCTGCTGTATAATAGTCTTTCAGGATaGCTAACTGGTATAAAAGTGTTCCGACTCCACCCCAAACCCATG +
Preference number: 5 (lower is better)
Translates to: ALIHLKVLLYNSLSG*LTGIKVFRLHPKPM
Trigger: CATGGGTTTGGGGTGGAGTCGGAACACTTTTATACCAGTTAGGCATCCTGAAAGACTATTATACAGCAGCACTTTCAGGTGGATTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391611.6
ENST00000406854.6
CDS GCA 90 bp GTGTCATCCATCCAAAGAAGAATAGTAGAGCAGTGCCTCCTGTACTaGCATACAGCAAGGTTATTCTATTTGGGAGCAGATACCATGTTC +
Preference number: 5 (lower is better)
Translates to: VSSIQRRIVEQCLLY*HTARLFYLGADTMF
Trigger: GAACATGGTATCTGCTCCCAAATAGAATAACCTTGCTGTATGGCAGTACAGGAGGCACTGCTCTACTATTCTTCTTTGGATGGATGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391611.6
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTGAATACAGTCACAGTTaGCACATCCTTCGGATAAAA +
Preference number: 5 (lower is better)
Translates to: KRTNFTELSCSQASEWGCEYSHS*HILRIK
Trigger: TTTTATCCGAAGGATGTGCAAACTGTGACTGTATTC...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTCTTCATGAGCCTAGTTaGCTTCTCAAAGAATACAGT +
Preference number: 5 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSLHEPS*LLKEYS
Trigger: ACTGTATTCTTTGAGAAGCAAACTAGGCTCATGAAG...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp GTGTCAGCATGTTTGCAAGCCAATGGGATGGAGTATGATTTAAGAAGCAAGAAAATGTCTTCTGGGGATTaGGGAGGTGGCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: VSACLQANGMEYDLRSKKMSSGD*GGGKVF
Trigger: GAACACTTTGCCACCTCCCAAATCCCCAGAAGACAT...TTTCTTGCTTCTTAAATCATACTCCATCCCATTGGCTTGCAAACATGCTGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCCTCTTGTTTTCCTTaGTCAACAGCAGGGTATCCT +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASESSCFP*STAGYP
Trigger: AGGATACCCTGCTGTTGACAAAGGAAAACAAGAGGA...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAACTCATCTCCTTCATTTaGGAACTGGGCATACAGCTA +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASELISFI*ELGIQL
Trigger: TAGCTGTATGCCCAGTTCCAAAATGAAGGAGATGAG...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp CTGTGTTGTATAGCTCATTATCTGGGTCCCCTGTGGCTCTGTCCCATCATCTGTAGTTGTGCACATATTTaGTCAGATGACTCTAGGATT +
Preference number: 5 (lower is better)
Translates to: LCCIAHYLGPLWLCPIICSCAHI*SDDSRI
Trigger: AATCCTAGAGTCATCTGACAAAATATGTGCACAACT...ACAGATGATGGGACAGAGCCACAGGGGACCCAGATAATGAGCTATACAACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTATCCATCTAGGCTTGTaGTTTCACTATGGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSIHLGL*FHYGKA
Trigger: TGCTTTTCCATAGTGAAACAACAAGCCTAGATGGAT...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTGAAACACAGTTGGGGTaGTGTAAGGTGACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFETQLG*CKVTAG
Trigger: ACCTGCTGTCACCTTACACAACCCCAACTGTGTTTC...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTAGTAGAGATGGGGTTTaGCCAGGCTGGTCTCTAACT +
Preference number: 5 (lower is better)
Translates to: LLSHLLKATSFNTVALGISRDGV*PGWSLT
Trigger: AGTTAGAGACCAGCCTGGCAAAACCCCATCTCTACT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AATACCATCACATTGGGGTTTAAGACTGTAATATATGAATTCTGGAGAGACACAAGGCGGGTGGATCACTaGAGGTCAGGACTTTGGGAC +
Preference number: 5 (lower is better)
Translates to: NTITLGFKTVIYEFWRDTRRVDH*RSGLWD
Trigger: GTCCCAAAGTCCTGACCTCAAGTGATCCACCCGCCT...TGTGTCTCTCCAGAATTCATATATTACAGTCTTAAACCCCAATGTGATGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS GCA 90 bp CTGCTATACATAGTGTCATCCATCCAAAGAAGAATAGTAGAGCAGTaGCTCCTGTACTGCCATACAGCAAGGTTATTCTATTTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LLYIVSSIQRRIVEQ*LLYCHTARLFYLGA
Trigger: TGCTCCCAAATAGAATAACCTTGCTGTATGGCAGTACAGGAGGCACTGCTCTACTATTCTTCTTTGGATGGATGACACTATGTATAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391611.6
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAACCTTTTGGAGCAGTATaGAACAAGTATCCACACAAG +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASEPFGAV*NKYPHK
Trigger: CTTGTGTGGATACTTGTTCAATACTGCTCCAAAAGG...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCCTTTTGGAGCAGTATaGAACAAGTATCCACACAAG +
Preference number: 5 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNPFGAV*NKYPHK
Trigger: CTTGTGTGGATACTTGTTCAATACTGCTCCAAAAGG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp CCTTCCACTTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTATGTCTTCTGGGGATTaGGGAGGTGGCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: PSTFHQIPNQCTSHVHILMSSGD*GGGKVF
Trigger: GAACACTTTGCCACCTCCCAAATCCCCAGAAGACAT...AAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR CAA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGTCCTCTTGTTTTCCTTaGTCAACAGCAGGGTATCCT +
Preference number: 5 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQSSCFP*STAGYP
Trigger: AGGATACCCTGCTGTTGACAAAGGAAAACAAGAGGA...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp CTCAGGCATCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTGTATGTGGAGAGGTTTaGAAGAATAAATCGGATATC +
Preference number: 5 (lower is better)
Translates to: LRHLNGGVEKSSSYKNHSVCGEV*KNKSDI
Trigger: GATATCCGATTTATTCTTCAAAACCTCTCCACATAC...ACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGCACCTGAATCCAGTTTaGGGAAGTGAGAAGATCCTA +
Preference number: 5 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQHLNPV*GSEKIL
Trigger: TAGGATCTTCTCACTTCCCAAAACTGGATTCAGGTG...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATGGGGGTGTCTAATTGGCATGAAGTaGTGCACATATTTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: KRTNFTELSCSQASEWGCLIGMK*CTYFVR
Trigger: TCTGACAAAATATGTGCACAACTTCATGCCAATTAG...ACACCCCCATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTATGGAGACACATGGGGTaGGCTATCTGGCTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILWRHMG*AIWLLE
Trigger: CTCCAAAAGCCAGATAGCCAACCCCATGTGTCTCCA...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGAAAGCTGAAACACAGTaGGGGTTGTGTAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQKAETQ*GLCKVT
Trigger: TGTCACCTTACACAACCCCAACTGTGTTTCAGCTTT...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAAGTGCCTGCCTAGCATaGTGCCTGCTGATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPSACLA*CLLMSV
Trigger: AACAGACATCAGCAGGCACAATGCTAGGCAGGCACT...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCCCTTATGAGTGTTTaGGTATTGTTGGGACTTGGT +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASESLMSV*VLLGLG
Trigger: ACCAAGTCCCAACAATACCAAAACACTCATAAGGGA...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGTAATGTGGAACAGTTaGCTTTGGGCCAGATCCCTT +
Preference number: 5 (lower is better)
Translates to: LLSHLLKATSFNTVALGIVMWNS*LWARSL
Trigger: AAGGGATCTGGCCCAAAGCAAACTGTTCCACATTAC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS CCA 90 bp ACCATTCTAAAGGCTCTTGTGAATCCAATACAGACAGACACTGAGTaGAGCCCTTGTAAGGAACTGTCCAATGAAAGAAATGCTATCATG +
Preference number: 5 (lower is better)
Translates to: TILKALVNPIQTDTE*SPCKELSNERNAIM
Trigger: CATGATAGCATTTCTTTCATTGGACAGTTCCTTACAAGGGCTCCACTCAGTGTCTGTCTGTATTGGATTCACAAGAGCCTTTAGAATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000553513.1
CDS-3UTR CAA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTCTAAAACCTGCTCCATaGCCCATAAGAGAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFLKPAP*PIREVH
Trigger: ATGCACTTCTCTTATGGGCAATGGAGCAGGTTTTAG...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACATGTCTTCTGGGGATTaGGGAGGTGGCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDMSSGD*GGGKVF
Trigger: GAACACTTTGCCACCTCCCAAATCCCCAGAAGACAT...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp GTATGTGGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGGTTCTGCTGGGACTAGGAGCCATATaGTCTATTCCAAATAAACTA +
Preference number: 5 (lower is better)
Translates to: VCGEVLKNKSDIPGEVLLGLGAI*SIPNKL
Trigger: TAGTTTATTTGGAATAGACAATATGGCTCCTAGTCC...CAGCAGAACCTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCCACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAGTTCTTCATCATCGTTaGTGGCATAAAGTAATTCCC +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASEVLHHR*WHKVIP
Trigger: GGGAATTACTTTATGCCACAAACGATGATGAAGAAC...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTTTATCTCCTCACAGGTaGCTTCTGCCATATTCTCTC +
Preference number: 5 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFLSPHR*LLPYSL
Trigger: GAGAGAATATGGCAGAAGCAACCTGTGAGGAGATAA...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAGGGAAAGGCTGGGTATaGAATTCTAAAATTGCAGAT +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASEGKGWV*NSKIAD
Trigger: ATCTGCAATTTTAGAATTCAATACCCAGCCTTTCCC...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAAATCCATCTAGGCTTGTaGTTTCACTATGGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: KMAKRTNFTELSCSQASEIHLGL*FHYGKA
Trigger: TGCTTTTCCATAGTGAAACAACAAGCCTAGATGGAT...TTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCTTTTGGAGAGACTTaGTCTACCACAAGAATAGAG +
Preference number: 5 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQAFGET*STTRIE
Trigger: CTCTATTCTTGTGGTAGACAAAGTCTCTCCAAAAGC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGCTGATGCAGTAGCTTaGTGCCCAGTGATGGAAAGA +
Preference number: 5 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILADAVA*CPVMER
Trigger: TCTTTCCATCACTGGGCACAAAGCTACTGCATCAGC...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGTCCCTTATGAGTGTTTaGGTATTGTTGGGACTTGGT +
Preference number: 5 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQSLMSV*VLLGLG
Trigger: ACCAAGTCCCAACAATACCAAAACACTCATAAGGGA...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTAGTGGAACAGTTTGCTTaGGGCCAGATCCCTTATGAG +
Preference number: 5 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLVEQFA*GQIPYE
Trigger: CTCATAAGGGATCTGGCCCAAAGCAAACTGTTCCAC...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGATAAGTATCCTGTGTTaGGAAAGTCGCAGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQISILC*ESRSLC
Trigger: ACAGAGACTGCGACTTTCCAAACACAGGATACTTAT...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS-3UTR CAA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAACTAAAACCTGCTCCATaGCCCATAAGAGAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQLKPAP*PIREVH
Trigger: ATGCACTTCTCTTATGGGCAATGGAGCAGGTTTTAG...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCAACCTGGGCACCATTaGGTAGTAGTACACTGTATC +
Preference number: 5 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDQPGHH*VVVHCI
Trigger: GATACAGTGTACTACTACCAAATGGTGCCCAGGTTG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp GTGGATGAGCTTGTATACTATAACGTTCTTCATCATCGTTTGTGGCATAAAGTACAACCTGGGCACCATTaGGTAGTAGTACACTGTATC +
Preference number: 5 (lower is better)
Translates to: VDELVYYNVLHHRLWHKVQPGHH*VVVHCI
Trigger: GATACAGTGTACTACTACCAAATGGTGCCCAGGTTG...TACTTTATGCCACAAACGATGATGAAGAACGTTATAGTATACAAGCTCATCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CAA 90 bp CATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACTTCAATGGGTTAGTTAGATCCTCTTGTTTTCCTTaGTCAACAGCAGGGTATCCT +
Preference number: 5 (lower is better)
Translates to: HLPKFESQVLQNFNGLVRSSCFP*STAGYP
Trigger: AGGATACCCTGCTGTTGACAAAGGAAAACAAGAGGA...TCTAACTAACCCATTGAAGTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp TATCCCAGGGGAGGTTCTGCTGCTTGTACCGTAAGATTTCTTAAAAGTAGTGGAGTATGTGGAGAGGTTTaGAAGAATAAATCGGATATC +
Preference number: 5 (lower is better)
Translates to: YPRGGSAACTVRFLKSSGVCGEV*KNKSDI
Trigger: GATATCCGATTTATTCTTCAAAACCTCTCCACATAC...TCCACTACTTTTAAGAAATCTTACGGTACAAGCAGCAGAACCTCCCCTGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555740.5
ENST00000555929.1
CDS-3UTR CAA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACGGGAAAGGCTGGGTATaGAATTCTAAAATTGCAGAT +
Preference number: 5 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNGKGWV*NSKIAD
Trigger: ATCTGCAATTTTAGAATTCAATACCCAGCCTTTCCC...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGCATCTGAATCTTTCATTCCTGATATaGGTTGTTTGTGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RWLREPTLRSLAVLRHLNLSFLI*VVCVSS
Trigger: GGAAGAAACACAAACAACCAATATCAGGAATGAAAG...ATTCAGATGCCTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTAGTTTTTGCCAGGTTTaGGTATCTAGGTTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: LLSHLLKATSFNTVALGISFCQV*VSRFSG
Trigger: GCCAGAAAACCTAGATACCAAAACCTGGCAAAAACT...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTACCCAGTCCTAGGTATTaGCCCAAGAGAAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILPSPRY*PKRNES
Trigger: GCTTTCATTTCTCTTGGGCAAATACCTAGGACTGGG...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTCCCAGAAGTTTCCCTTaGCCCTTTTGTAATCATTTC +
Preference number: 5 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFPRSFP*PFCNHF
Trigger: GAAATGATTACAAAAGGGCAAAGGGAAACTTCTGGG...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACTGTTTTTCCTGGCTCTaGAGGCTGGGAATTCCAAGA +
Preference number: 5 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDCFSWL*RLGIPR
Trigger: TCTTGGAATTCCCAGCCTCAAGAGCCAGGAAAAACA...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATGGTATTGTTGGGACTaGGTAGTGTGGGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLWYCWD*VVWVEA
Trigger: AGCTTCTACCCACACTACCAAGTCCCAACAATACCA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCAGTAATGTGGAACAGTTaGCTTTGGGCCAGATCCCTT +
Preference number: 5 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPVMWNS*LWARSL
Trigger: AAGGGATCTGGCCCAAAGCAAACTGTTCCACATTAC...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp GTGTCAGCATGTTTGCAAGCCAATGGGATGGAGTATGATTTAAGAAGCAAGAAACACATCTTCCAAAATTaGAGTCCCAGGTTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: VSACLQANGMEYDLRSKKHIFQN*SPRFSK
Trigger: TTTGGAGAACCTGGGACTCAAATTTTGGAAGATGTG...TTTCTTGCTTCTTAAATCATACTCCATCCCATTGGCTTGCAAACATGCTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS TCA 90 bp TTTTCCGGACCACTGGGTAAATCCTTAGATTTGGTTCCAATTTTGTaGCCCATATCACTTAAGTTCAGACTCAGCAAGAAACCAAATCCA +
Preference number: 5 (lower is better)
Translates to: FSGPLGKSLDLVPIL*PISLKFRLSKKPNP
Trigger: TGGATTTGGTTTCTTGCTGAGTCTGAACTTAAGTGATATGGGTCACAAAATTGGAACCAAATCTAAGGATTTACCCAGTGGTCCGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
CDS GCA 90 bp TTGTGTATTCTTGCTCAAAAGCATCTTCAAAAACTTCATCAACTCTaGGAGCTTCTGCAGTATGACAGGATGTTTCCTGCAATTCTAACC +
Preference number: 5 (lower is better)
Translates to: LCILAQKHLQKLHQL*ELLQYDRMFPAILT
Trigger: GGTTAGAATTGCAGGAAACATCCTGTCATACTGCAGAAGCTCGCAGAGTTGATGAAGTTTTTGAAGATGCTTTTGAGCAAGAATACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
ENST00000555929.1
CDS GCA 90 bp ATGAGAAATTTGACAGTCTCAGCACCAGTACAACTGGTAAATTCATaGTCATCCTCCTCTGCTAAGATATCCGTGGTTAGTATTCTTTCT +
Preference number: 5 (lower is better)
Translates to: MRNLTVSAPVQLVNS*SSSSAKISVVSILS
Trigger: AGAAAGAATACTAACCACGGATATCTTAGCAGAGGAGGATGAGCATGAATTTACCAGTTGTACTGGTGCTGAGACTGTCAAATTTCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391611.6
ENST00000406854.6
CDS-3UTR CAA 90 bp CATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACTTCAATGGGTTAGTTAGACCTTTTGGAGCAGTATaGAACAAGTATCCACACAAG +
Preference number: 5 (lower is better)
Translates to: HLPKFESQVLQNFNGLVRPFGAV*NKYPHK
Trigger: CTTGTGTGGATACTTGTTCAATACTGCTCCAAAAGG...TCTAACTAACCCATTGAAGTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACTCCTCTTGTTTTCCTTaGTCAACAGCAGGGTATCCT +
Preference number: 5 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDSSCFP*STAGYP
Trigger: AGGATACCCTGCTGTTGACAAAGGAAAACAAGAGGA...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp AGAACCATTAAGATGGCTAAGAGAACCAACTTTACGGAGCTTAGCTGTTCTCAGGGACTAGGAGCCATATaGTCTATTCCAAATAAACTA +
Preference number: 5 (lower is better)
Translates to: RTIKMAKRTNFTELSCSQGLGAI*SIPNKL
Trigger: TAGTTTATTTGGAATAGACAATATGGCTCCTAGTCC...CTGAGAACAGCTAAGCTCCGTAAAGTTGGTTCTCTTAGCCATCTTAATGGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp TCTGAATGGGGGTGTGGAGAAGTCCTCAAGTTACAAGAATCACAGTTACTTTTTGTTCTTCATCATCGTTaGTGGCATAAAGTAATTCCC +
Preference number: 5 (lower is better)
Translates to: SEWGCGEVLKLQESQLLFVLHHR*WHKVIP
Trigger: GGGAATTACTTTATGCCACAAACGATGATGAAGAAC...AAAAAGTAACTGTGATTCTTGTAACTTGAGGACTTCTCCACACCCCCATTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000555740.5
CDS-3UTR CAA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTACTTAAGACATCTCTaGCATAAAGGTACTTTGTGG +
Preference number: 5 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNYLRHL*HKGTLW
Trigger: CCACAAAGTACCTTTATGCAAGAGATGTCTTAAGTA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CAAGGTTCGCCAAAGACAGTCAAGAGCTGTGAAAGCCAAATGTTCACATTTAACTCTTTTTCTTGTTTCTaGTGGTGGGAACTTAGGTTA +
Preference number: 5 (lower is better)
Translates to: QGSPKTVKSCESQMFTFNSFSCF*WWELRL
Trigger: TAACCTAAGTTCCCACCACAAGAAACAAGAAAAAGA...GTTAAATGTGAACATTTGGCTTTCACAGCTCTTGACTGTCTTTGGCGAACCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTCATAGCAGCTTTACATAATAGCCCAAAACTGGAACCAACAAATGTCCATCAACCCAGAAGTTTCCCTTaGCCCTTTTGTAATCATTTC +
Preference number: 5 (lower is better)
Translates to: LIAALHNSPKLEPTNVHQPRSFP*PFCNHF
Trigger: GAAATGATTACAAAAGGGCAAAGGGAAACTTCTGGG...TTGATGGACATTTGTTGGTTCCAGTTTTGGGCTATTATGTAAAGCTGCTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAAAAGCTGAAACACAGTaGGGGTTGTGTAAGGTGACA +
Preference number: 5 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILKAETQ*GLCKVT
Trigger: TGTCACCTTACACAACCCCAACTGTGTTTCAGCTTT...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACCACTTGCACTGGGCCTaGAAAGAAAGGAATTTAGAC +
Preference number: 5 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDHLHWA*KERNLD
Trigger: GTCTAAATTCCTTTCTTTCAAGGCCCAGTGCAAGTG...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTACCAGGAATGAGAAATTaGACAGTCTCAGCACCAGTA +
Preference number: 5 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILPGMRN*TVSAPV
Trigger: TACTGGTGCTGAGACTGTCAAATTTCTCATTCCTGG...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406854.6
CDS TCA 90 bp TCCACCATATGTCTGTACTGGAGATCAAGTGTACTGTTGATACAATaGCTGTCTCCAATAAAGCATTTTCTGTATTCTGCCATACCATTC +
Preference number: 5 (lower is better)
Translates to: STICLYWRSSVLLIQ*LSPIKHFLYSAIPF
Trigger: GAATGGTATGGCAGAATACAGAAAATGCTTTATTGGAGACAGTCATTGTATCAACAGTACACTTGATCTCCAGTACAGACATATGGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000553513.1
CDS TCA 90 bp AAAGCATCTTCAAAAACTTCATCAACTCTGCGAGCTTCTGCAGTATaGCAGGATGTTTCCTGCAATTCTAACCCCTTAATGTTAATAGAG +
Preference number: 5 (lower is better)
Translates to: KASSKTSSTLRASAV*QDVSCNSNPLMLIE
Trigger: CTCTATTAACATTAAGGGGTTAGAATTGCAGGAAACATCCTGTCATACTGCAGAAGCTCGCAGAGTTGATGAAGTTTTTGAAGATGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
ENST00000555929.1
CDS-3UTR CAA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCACCTTTTGGAGCAGTATaGAACAAGTATCCACACAAG +
Preference number: 5 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPPFGAV*NKYPHK
Trigger: CTTGTGTGGATACTTGTTCAATACTGCTCCAAAAGG...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACTTCAATGGGTTAGTTAGATTTCTTCCAGTACATTaGAGGCCTTCTCTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: HLPKFESQVLQNFNGLVRFLPVH*RPSLLN
Trigger: ATTCAGAAGAGAAGGCCTCAAATGTACTGGAAGAAA...TCTAACTAACCCATTGAAGTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp AATACAAATGTATGTGGAGAGGTTTTGAAGAATAAATCGGATATCCCAGGGGAGTTTCTTCCAGTACATTaGAGGCCTTCTCTTCTGAAT +
Preference number: 5 (lower is better)
Translates to: NTNVCGEVLKNKSDIPGEFLPVH*RPSLLN
Trigger: ATTCAGAAGAGAAGGCCTCAAATGTACTGGAAGAAA...CTCCCCTGGGATATCCGATTTATTCTTCAAAACCTCTCCACATACATTTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555740.5
CDS-3UTR CAA 90 bp TTACTCAGTCACCTCTTAAAGGCCACATCCTTTAATACTGTTGCTTTGGGGATTGTATGTGGAGAGGTTTaGAAGAATAAATCGGATATC +
Preference number: 5 (lower is better)
Translates to: LLSHLLKATSFNTVALGIVCGEV*KNKSDI
Trigger: GATATCCGATTTATTCTTCAAAACCTCTCCACATAC...AATCCCCAAAGCAACAGTATTAAAGGATGTGGCCTTTAAGAGGTGACTGAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AATACCATCACATTGGGGTTTAAGACTGTAATATATGAATTCTGGAGAGACACACCTTTCAACACTGCTTaGAACTCTCCTTACGTAGGT +
Preference number: 5 (lower is better)
Translates to: NTITLGFKTVIYEFWRDTPFNTA*NSPYVG
Trigger: ACCTACGTAAGGAGAGTTCAAAGCAGTGTTGAAAGG...TGTGTCTCTCCAGAATTCATATATTACAGTCTTAAACCCCAATGTGATGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391611.6
CDS-3UTR CAA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAACAATAGCCTGGGAATaGCTTTTAGAAATCTGTGAG +
Preference number: 5 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILTIAWE*LLEICE
Trigger: CTCACAGATTTCTAAAAGCAATTCCCAGGCTATTGT...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTAACATATCATCTGTCACATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACACAATAGCCTGGGAATaGCTTTTAGAAATCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LTYHLSHLPKFESQVLQNTIAWE*LLEICE
Trigger: CTCACAGATTTCTAAAAGCAATTCCCAGGCTATTGT...GTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATGTGACAGATGATATGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp CCAGTCACGTTCATATTCTTCAAGGTACTTAATCAGTTCTCTAAAGTCTTCTATCCTTTTGGAGCAGTATaGAACAAGTATCCACACAAG +
Preference number: 5 (lower is better)
Translates to: PVTFIFFKVLNQFSKVFYPFGAV*NKYPHK
Trigger: CTTGTGTGGATACTTGTTCAATACTGCTCCAAAAGG...ATAGAAGACTTTAGAGAACTGATTAAGTACCTTGAAGAATATGAACGTGACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556360.1
CDS-3UTR CAA 90 bp CATCTTCCAAAATTTGAGTCCCAGGTTCTCCAAAACTTCAATGGGTTAGTTAGAGGACTAGGAGCCATATaGTCTATTCCAAATAAACTA +
Preference number: 5 (lower is better)
Translates to: HLPKFESQVLQNFNGLVRGLGAI*SIPNKL
Trigger: TAGTTTATTTGGAATAGACAATATGGCTCCTAGTCC...TCTAACTAACCCATTGAAGTTTTGGAGAACCTGGGACTCAAATTTTGGAAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406949.5
CDS-3UTR CAA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAATACTCTTAGAAAAGTaGACAGGTACAGATGGCTGT +
Preference number: 5 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILILLEK*TGTDGC
Trigger: ACAGCCATCTGTACCTGTCAACTTTTCTAAGAGTAT...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAATGAGTGTTTTGGTATaGTTGGGACTTGGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKMSVLV*LGLGSV
Trigger: CACACTACCAAGTCCCAACAATACCAAAACACTCAT...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAACCAATGTACCAGTCACGTTCATATTCTTCAAGGTACTTAATCAGTTCTCTAGTTCTTCATCATCGTTaGTGGCATAAAGTAATTCCC +
Preference number: 5 (lower is better)
Translates to: KPMYQSRSYSSRYLISSLVLHHR*WHKVIP
Trigger: GGGAATTACTTTATGCCACAAACGATGATGAAGAAC...TAGAGAACTGATTAAGTACCTTGAAGAATATGAACGTGACTGGTACATTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR CAA 90 bp TCCACTTTTCATCAGATACCAAACCAATGTACCAGTCACGTTCATATTCTTCAAGTATGTGGAGAGGTTTaGAAGAATAAATCGGATATC +
Preference number: 5 (lower is better)
Translates to: STFHQIPNQCTSHVHILQVCGEV*KNKSDI
Trigger: GATATCCGATTTATTCTTCAAAACCTCTCCACATAC...TTGAAGAATATGAACGTGACTGGTACATTGGTTTGGTATCTGATGAAAAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555929.1
CDS-3UTR CAA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCATACTTAAGACATCTCTaGCATAAAGGTACTTTGTGG +
Preference number: 5 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPYLRHL*HKGTLW
Trigger: CCACAAAGTACCTTTATGCAAGAGATGTCTTAAGTA...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTAGATTCAGCTCAGGAAGATTCCACTGGCAACTCCTTACTTCTACTATTATTATCTGGGAATGCAGACTaGTCTTTTCTCATTTTAGTT +
Preference number: 5 (lower is better)
Translates to: LDSAQEDSTGNSLLLLLLSGNAD*SFLILV
Trigger: AACTAAAATGAGAAAAGACAAGTCTGCATTCCCAGA...TAATAATAGTAGAAGTAAGGAGTTGCCAGTGGAATCTTCCTGAGCTGAATCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AGCCTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTACTTTCATTCCTGATATaGGTTGTTTGTGTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SLLKSRGHKYWPNSSFILLSFLI*VVCVSS
Trigger: GGAAGAAACACAAACAACCAATATCAGGAATGAAAG...TAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp CTACTAAAGTCCAGAGGGCACAAATATTGGCCAAATAGTTCTTTTATCTTAGACTCAATCCATCTAGGCTaGTTGTTTCACTATGGAAAA +
Preference number: 5 (lower is better)
Translates to: LLKSRGHKYWPNSSFILDSIHLG*LFHYGK
Trigger: TTTTCCATAGTGAAACAACAAGCCTAGATGGATTGA...GTCTAAGATAAAAGAACTATTTGGCCAATATTTGTGCCCTCTGGACTTTAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCATCAATCCATCTAGGCTaGTTGTTTCACTATGGAAAA +
Preference number: 5 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPSIHLG*LFHYGK
Trigger: TTTTCCATAGTGAAACAACAAGCCTAGATGGATTGA...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp AAAGTAGGTTTTAGGGAAAATTCAGTAACGTTAGTGTTAGTCCAAACTGCACCATTTCTTTTGCCTGCTTaGGGCTTATTTTGCTATTCT +
Preference number: 5 (lower is better)
Translates to: KVGFRENSVTLVLVQTAPFLLPA*GLFCYS
Trigger: AGAATAGCAAAATAAGCCCAAAGCAGGCAAAAGAAA...TGGTGCAGTTTGGACTAACACTAACGTTACTGAATTTTCCCTAAAACCTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS-3UTR CAA 90 bp TTTTGTACACATAAACTGCTGGCGGGAATGTCAAAAGGTACAATTAACTTGAAAATACTCTTAGAAAAGTaGACAGGTACAGATGGCTGT +
Preference number: 5 (lower is better)
Translates to: FCTHKLLAGMSKGTINLKILLEK*TGTDGC
Trigger: ACAGCCATCTGTACCTGTCAACTTTTCTAAGAGTAT...TTTCAAGTTAATTGTACCTTTTGACATTCCCGCCAGCAGTTTATGTGTACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317623.8
ENST00000406854.6
CDS GCA 72 bp CTCCGGCGGCCGCCACCCGGAGCTGAACGGAGCGCGTaGGCGTTCGGGGACCTCGTCGGCGCCTGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: LRRPPPGAERSA*AFGDLVGAWLA
Trigger: GGCCAGCCAGGCGCCGACGAGGTCCCCGAACGCGCACGCGCTCCGTTCAGCTCCGGGTGGCGGCCGCCGGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS GCA 72 bp CGTTCGGGGACCTCGTCGGCGCCTGGCTGGCCTCGCTaGCCCGGTCTGTGCTCGCTCCCGAGGCGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: RSGTSSAPGWPR*PGLCSLPRRAL
Trigger: CAGGGCCCGCCTCGGGAGCGAGCACAGACCGGGGCAGCGAGGCCAGCCAGGCGCCGACGAGGTCCCCGAACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS CCA 72 bp GCGCGTGCGCGTTCGGGGACCTCGTCGGCGCCTGGCTaGCCTCGCTGCCCCGGTCTGTGCTCGCTCCCGAGG +
Preference number: 6 (lower is better)
Translates to: ARARSGTSSAPG*PRCPGLCSLPR
Trigger: CCTCGGGAGCGAGCACAGACCGGGGCAGCGAGGCCAGCCAGGCGCCGACGAGGTCCCCGAACGCGCACGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS CCA 72 bp CGGAGCGCGTGCGCGTTCGGGGACCTCGTCGGCGCCTaGCTGGCCTCGCTGCCCCGGTCTGTGCTCGCTCCC +
Preference number: 6 (lower is better)
Translates to: RSACAFGDLVGA*LASLPRSVLAP
Trigger: GGGAGCGAGCACAGACCGGGGCAGCGAGGCCAGCCAGGCGCCGACGAGGTCCCCGAACGCGCACGCGCTCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS CCA 72 bp CACCGCGGCCCCGCCCGGGCCAGCTCTCGGTTTCCATaGCTAACGTCTACTCCGGCGGCCGCCACCCGGAGC +
Preference number: 6 (lower is better)
Translates to: HRGPARASSRFP*LTSTPAAATRS
Trigger: GCTCCGGGTGGCGGCCGCCGGAGTAGACGTTAGCCATGGAAACCGAGAGCTGGCCCGGGCGGGGCCGCGGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS TCA 72 bp TGGCTAACGTCTACTCCGGCGGCCGCCACCCGGAGCTaGACGGAGCGCGTGCGCGTTCGGGGACCTCGTCGG +
Preference number: 6 (lower is better)
Translates to: WLTSTPAAATRS*TERVRVRGPRR
Trigger: CCGACGAGGTCCCCGAACGCGCACGCGCTCCGTTCAGCTCCGGGTGGCGGCCGCCGGAGTAGACGTTAGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS CCA 72 bp CTGCCTGGCCGGGGACGACGGGAGTCGCTCGTGCTCTaGTCTCGCACTGGGCCTAGCAGAAGCAGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: LPGRGRRESLVL*SRTGPSRSSSG
Trigger: CCCGCTGCTGCTTCTGCTAGGCCCAGTGCGAGACCAGAGCACGAGCGACTCCCGTCGTCCCCGGCCAGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
CDS CCA 72 bp CGCTTCGTTCGCGCCAGGACTAGGCCAACATCTGCCTaGCCGGGGACGACGGGAGTCGCTCGTGCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: RFVRARTRPTSA*PGTTGVARALV
Trigger: GACCAGAGCACGAGCGACTCCCGTCGTCCCCGGCCAGGCAGATGTTGGCCTAGTCCTGGCGCGAACGAAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS GCA 72 bp AACATCTGCCTGGCCGGGGACGACGGGAGTCGCTCGTaGTCTGGTCTCGCACTGGGCCTAGCAGAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: NICLAGDDGSRS*SGLALGLAEAA
Trigger: TGCTGCTTCTGCTAGGCCCAGTGCGAGACCAGAGCACGAGCGACTCCCGTCGTCCCCGGCCAGGCAGATGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
CDS GCA 72 bp AGGTTGGTTAGTGCCCGAATGCGGAGGCAGAAAAGCTaGGGCGGCCGAATAACGAGCTCACCGCGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: RLVSARMRRQKS*GGRITSSPRPR
Trigger: GCGGGGCCGCGGTGAGCTCGTTATTCGGCCGCCGCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCAACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS CCA 72 bp CAGGTAAACTCGGGCTGGGCGCTCCCGCCGGGAGGTTaGTTAGTGCCCGAATGCGGAGGCAGAAAAGCTGCG +
Preference number: 6 (lower is better)
Translates to: QVNSGWALPPGG*LVPECGGRKAA
Trigger: CGCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCAACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS CAA 72 bp GCAGGTAAACTCGGGCTGGGCGCTCCCGCCGGGAGGTaGGTTAGTGCCCGAATGCGGAGGCAGAAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: AGKLGLGAPAGR*VSARMRRQKSC
Trigger: GCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCAACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS CAA 90 bp CGCATTTTTGCAGGTAAACTCGGGCTGGGCGCTCCCGCCGGGAGGTaGGTTAGTGCCCGAATGCGGAGGCAGAAAAGCTGCGGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: RIFAGKLGLGAPAGR*VSARMRRQKSCGGR
Trigger: TCGGCCGCCGCAGCTTTTCTGCCTCCGCATTCGGGCACTAACCAACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTGCAAAAATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS CCA 72 bp CTCGCTCCCGAGGCGGGCCCTGCCGTAAAGCAGGCTTaGCCTAGAGGAAGCAGGGAAATAGCGCGCTTCGTT +
Preference number: 6 (lower is better)
Translates to: LAPEAGPAVKQA*PRGSREIARFV
Trigger: AACGAAGCGCGCTATTTCCCTGCTTCCTCTAGGCCAAGCCTGCTTTACGGCAGGGCCCGCCTCGGGAGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000556907.1
CDS CAA 90 bp ACCCGAGGGAAGAGAAGACGCGAAGGCATCCCAGGGACCGCATTTTaGCAGGTAAACTCGGGCTGGGCGCTCCCGCCGGGAGGTTGGTTA +
Preference number: 6 (lower is better)
Translates to: TRGKRRREGIPGTAF*QVNSGWALPPGGWL
Trigger: TAACCAACCTCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTGCAAAAATGCGGTCCCTGGGATGCCTTCGCGTCTTCTCTTCCCTCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS CAA 72 bp AAGAGAAGACGCGAAGGCATCCCAGGGACCGCATTTTaGCAGGTAAACTCGGGCTGGGCGCTCCCGCCGGGA +
Preference number: 6 (lower is better)
Translates to: KRRREGIPGTAF*QVNSGWALPPG
Trigger: TCCCGGCGGGAGCGCCCAGCCCGAGTTTACCTGCAAAAATGCGGTCCCTGGGATGCCTTCGCGTCTTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000391611.6
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
ENST00000556907.1
CDS TCA 72 bp ACACAGGCTGTGGTGCCTGCTGCTCCTGGCCAACTCTaGATAGGTCGGGGAAACCCCACCAAGAACACAGGA +
Preference number: 6 (lower is better)
Translates to: TQAVVPAAPGQL*IGRGNPTKNTG
Trigger: TCCTGTGTTCTTGGTGGGGTTTCCCCGACCTATTCAGAGTTGGCCAGGAGCAGCAGGCACCACAGCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS GCA 72 bp CAACCTGGGCACCATTTGGTAGTAGTACACTGTATCTaGACACACACAGGCTGTGGTGCCTGCTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: QPGHHLVVVHCI*THTGCGACCSW
Trigger: CCAGGAGCAGCAGGCACCACAGCCTGTGTGTGTGCAGATACAGTGTACTACTACCAAATGGTGCCCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000554534.5
ENST00000555740.5
CDS CAA 72 bp ATGAGCCTCCAAGGCCGAACTCTAAAACCTGCTCCATaGCCCATAAGAGAAGTGCATCGGGTGGGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: MSLQGRTLKPAP*PIREVHRVGAE
Trigger: CTCTGCCCCCACCCGATGCACTTCTCTTATGGGCAATGGAGCAGGTTTTAGAGTTCGGCCTTGGAGGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
CDS CAA 90 bp AGCTGCCATTGCAGTCTGCAGTACAGCAGTCAACCTGGGCACCATTaGGTAGTAGTACACTGTATCTGCACACACACAGGCTGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: SCHCSLQYSSQPGHH*VVVHCICTHTGCGA
Trigger: GGCACCACAGCCTGTGTGTGTGCAGATACAGTGTACTACTACCAAATGGTGCCCAGGTTGACTGCTGTACTGCAGACTGCAATGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000554534.5
ENST00000555740.5
CDS GCA 72 bp GACATAGATGAGCCTCCAAGGCCGAACTCTAAAACCTaGTCCATTGCCCATAAGAGAAGTGCATCGGGTGGG +
Preference number: 6 (lower is better)
Translates to: DIDEPPRPNSKT*SIAHKRSASGG
Trigger: CCCACCCGATGCACTTCTCTTATGGGCAATGGAGCAGGTTTTAGAGTTCGGCCTTGGAGGCTCATCTATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000555569.1
CDS CCA 72 bp CAGCTGCCATTGCAGTCTGCAGTACAGCAGTCAACCTaGGCACCATTTGGTAGTAGTACACTGTATCTGCAC +
Preference number: 6 (lower is better)
Translates to: QLPLQSAVQQST*APFGSSTLYLH
Trigger: GTGCAGATACAGTGTACTACTACCAAATGGTGCCCAGGTTGACTGCTGTACTGCAGACTGCAATGGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000554534.5
ENST00000555740.5
CDS CAA 72 bp TGCAGTCTGCAGTACAGCAGTCAACCTGGGCACCATTaGGTAGTAGTACACTGTATCTGCACACACACAGGC +
Preference number: 6 (lower is better)
Translates to: CSLQYSSQPGHH*VVVHCICTHTG
Trigger: GCCTGTGTGTGTGCAGATACAGTGTACTACTACCAAATGGTGCCCAGGTTGACTGCTGTACTGCAGACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000554534.5
ENST00000555740.5
CDS CAA 72 bp CAGTCTTCTGGAAATAACGAGCTCATCTCCTTCATTTaGGAACTGGGCATACAGCTAGTCCTCCACTCTGCG +
Preference number: 6 (lower is better)
Translates to: QSSGNNELISFI*ELGIQLVLHSA
Trigger: CGCAGAGTGGAGGACTAGCTGTATGCCCAGTTCCAAAATGAAGGAGATGAGCTCGTTATTTCCAGAAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS CAA 90 bp GTAGAGCAGTGCCTCCTGTACTGCCATACAGCAAGGTTATTCTATTaGGGAGCAGATACCATGTTCCAAGACCACACGCTAATCCAGCAA +
Preference number: 6 (lower is better)
Translates to: VEQCLLYCHTARLFY*GADTMFQDHTLIQQ
Trigger: TTGCTGGATTAGCGTGTGGTCTTGGAACATGGTATCTGCTCCCAAATAGAATAACCTTGCTGTATGGCAGTACAGGAGGCACTGCTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391611.6
ENST00000406854.6
CDS CAA 90 bp AATTGGTACCAGTCTTCTGGAAATAACGAGCTCATCTCCTTCATTTaGGAACTGGGCATACAGCTAGTCCTCCACTCTGCGGGTAAGCAT +
Preference number: 6 (lower is better)
Translates to: NWYQSSGNNELISFI*ELGIQLVLHSAGKH
Trigger: ATGCTTACCCGCAGAGTGGAGGACTAGCTGTATGCCCAGTTCCAAAATGAAGGAGATGAGCTCGTTATTTCCAGAAGACTGGTACCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS CAA 72 bp TGCCTCCTGTACTGCCATACAGCAAGGTTATTCTATTaGGGAGCAGATACCATGTTCCAAGACCACACGCTA +
Preference number: 6 (lower is better)
Translates to: CLLYCHTARLFY*GADTMFQDHTL
Trigger: TAGCGTGTGGTCTTGGAACATGGTATCTGCTCCCAAATAGAATAACCTTGCTGTATGGCAGTACAGGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391611.6
ENST00000406854.6
CDS TCA 72 bp ATGTCAAAAGCACAGTCACGGCAAACAGTAAGAGTCTaGGTCCTGTATCCAGGCTTCTGTTCCACCATATGT +
Preference number: 6 (lower is better)
Translates to: MSKAQSRQTVRV*VLYPGFCSTIC
Trigger: ACATATGGTGGAACAGAAGCCTGGATACAGGACTCAGACTCTTACTGTTTGCCGTGACTGTGCTTTTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483571.5
CDS GCA 72 bp CACCTGAAAGTGCTGCTGTATAATAGTCTTTCAGGATaGCTAACTGGTATAAAAGTGTTCCGACTCCACCCC +
Preference number: 6 (lower is better)
Translates to: HLKVLLYNSLSG*LTGIKVFRLHP
Trigger: GGGGTGGAGTCGGAACACTTTTATACCAGTTAGGCATCCTGAAAGACTATTATACAGCAGCACTTTCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391611.6
ENST00000406854.6
CDS GCA 72 bp TTGACAGTCTCAGCACCAGTACAACTGGTAAATTCATaGTCATCCTCCTCTGCTAAGATATCCGTGGTTAGT +
Preference number: 6 (lower is better)
Translates to: LTVSAPVQLVNS*SSSSAKISVVS
Trigger: ACTAACCACGGATATCTTAGCAGAGGAGGATGAGCATGAATTTACCAGTTGTACTGGTGCTGAGACTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391611.6
ENST00000406854.6
CDS CCA 72 bp AAGGCTCTTGTGAATCCAATACAGACAGACACTGAGTaGAGCCCTTGTAAGGAACTGTCCAATGAAAGAAAT +
Preference number: 6 (lower is better)
Translates to: KALVNPIQTDTE*SPCKELSNERN
Trigger: ATTTCTTTCATTGGACAGTTCCTTACAAGGGCTCCACTCAGTGTCTGTCTGTATTGGATTCACAAGAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000553513.1
CDS TCA 72 bp TCAAAAACTTCATCAACTCTGCGAGCTTCTGCAGTATaGCAGGATGTTTCCTGCAATTCTAACCCCTTAATG +
Preference number: 6 (lower is better)
Translates to: SKTSSTLRASAV*QDVSCNSNPLM
Trigger: CATTAAGGGGTTAGAATTGCAGGAAACATCCTGTCATACTGCAGAAGCTCGCAGAGTTGATGAAGTTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
ENST00000555929.1
CDS GCA 72 bp ATAGTGTCATCCATCCAAAGAAGAATAGTAGAGCAGTaGCTCCTGTACTGCCATACAGCAAGGTTATTCTAT +
Preference number: 6 (lower is better)
Translates to: IVSSIQRRIVEQ*LLYCHTARLFY
Trigger: ATAGAATAACCTTGCTGTATGGCAGTACAGGAGGCACTGCTCTACTATTCTTCTTTGGATGGATGACACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391611.6
ENST00000406854.6
CDS TCA 72 bp GAAAAGAACCACACCAACAGTGCTTGGAATGAAATATaGTGCTATAGCTGTTCCAGCAGACATGATGAACAT +
Preference number: 6 (lower is better)
Translates to: EKNHTNSAWNEI*CYSCSSRHDEH
Trigger: ATGTTCATCATGTCTGCTGGAACAGCTATAGCATCATATTTCATTCCAAGCACTGTTGGTGTGGTTCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
CDS TCA 72 bp ACATTCTCTTTCATGCCAGGCCTTTTGGAGCAGTATTaGACAAGTATCCACACAAGTACTTTAATGAGGTCA +
Preference number: 6 (lower is better)
Translates to: TFSFMPGLLEQY*TSIHTSTLMRS
Trigger: TGACCTCATTAAAGTACTTGTGTGGATACTTGTTCAATACTGCTCCAAAAGGCCTGGCATGAAAGAGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
ENST00000556360.1
CDS CAA 72 bp AATCCGTCTGACAATACCAATCTTCATGAGCCTAGTTaGCTTCTCAAAGAATACAGTCACAGTTTGCACATC +
Preference number: 6 (lower is better)
Translates to: NPSDNTNLHEPS*LLKEYSHSLHI
Trigger: GATGTGCAAACTGTGACTGTATTCTTTGAGAAGCAAACTAGGCTCATGAAGATTGGTATTGTCAGACGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
CDS CAA 72 bp ATGAGAGGAATATATGGCATGTCCTCTTGTTTTCCTTaGTCAACAGCAGGGTATCCTAATAGAACTGCTTTG +
Preference number: 6 (lower is better)
Translates to: MRGIYGMSSCFP*STAGYPNRTAL
Trigger: CAAAGCAGTTCTATTAGGATACCCTGCTGTTGACAAAGGAAAACAAGAGGACATGCCATATATTCCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS TCA 72 bp CCACTGGGTAAATCCTTAGATTTGGTTCCAATTTTGTaGCCCATATCACTTAAGTTCAGACTCAGCAAGAAA +
Preference number: 6 (lower is better)
Translates to: PLGKSLDLVPIL*PISLKFRLSKK
Trigger: TTTCTTGCTGAGTCTGAACTTAAGTGATATGGGTCACAAAATTGGAACCAAATCTAAGGATTTACCCAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
CDS CAA 72 bp ATACTACACATACTTAGCTCTCTTATAGGTCAGGCATaGCACTATGGCTACACAACATTTTTAATTGGCTCC +
Preference number: 6 (lower is better)
Translates to: ILHILSSLIGQA*HYGYTTFLIGS
Trigger: GGAGCCAATTAAAAATGTTGTGTAGCCATAGTGCAATGCCTGACCTATAAGAGAGCTAAGTATGTGTAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483571.5
CDS CAA 90 bp GACATTTCCAAAGTGTTCATTAAGGGAACATACTCTTGTGTATTCTaGCTCAAAAGCATCTTCAAAAACTTCATCAACTCTGCGAGCTTC +
Preference number: 6 (lower is better)
Translates to: DISKVFIKGTYSCVF*LKSIFKNFINSASF
Trigger: GAAGCTCGCAGAGTTGATGAAGTTTTTGAAGATGCTTTTGAGCAAGAATACACAAGAGTATGTTCCCTTAATGAACACTTTGGAAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
CDS CCA 72 bp TTTCATGAGAATCAATTATGCCTGATAGAACATTCCTaGCATCAGAATACAATTTCACAGGCAAAACAGTAC +
Preference number: 6 (lower is better)
Translates to: FHENQLCLIEHS*HQNTISQAKQY
Trigger: GTACTGTTTTGCCTGTGAAATTGTATTCTGATGCCAGGAATGTTCTATCAGGCATAATTGATTCTCATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5
ENST00000556360.1
CDS CAA 72 bp TTAAAACTTTGTCCTTGGCAATTTCTTCCAGTACATTaGAGGCCTTCTCTTCTGAATGATAACATTCCAACT +
Preference number: 6 (lower is better)
Translates to: LKLCPWQFLPVH*RPSLLNDNIPT
Trigger: AGTTGGAATGTTATCATTCAGAAGAGAAGGCCTCAAATGTACTGGAAGAAATTGCCAAGGACAAAGTTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317623.8
ENST00000406854.6
ENST00000406949.5
ENST00000483571.5
ENST00000555740.5