RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCNX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000135749

Ensembl transcript IDs: ENST00000258229.14, ENST00000324142.4, ENST00000344698.6, ENST00000429988.2, ENST00000430153.5, ENST00000462233.5, ENST00000467336.6, ENST00000475463.6, ENST00000484041.5, ENST00000484347.5, ENST00000486012.5, ENST00000488780.6, ENST00000490102.6, ENST00000498302.1, ENST00000517808.1, ENST00000518351.2, ENST00000519530.1, ENST00000522067.1

Found 1211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCTCACGGACACTCAGGTGGCCGGTGGTGGTGACGGGCGGGGGCTaGGAGTGCAGGGACGTGGCCGAGGCGTGCAAGGAGAGCCGGCTG +
Preference number: 1 (lower is better)
Translates to: RSRTLRWPVVVTGGG*ECRDVAEACKESRL
Trigger: CAGCCGGCTCTCCTTGCACGCCTCGGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGAGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 90 bp AGGTGTGGGGGAGCCAGCCTCCCCGCCCGGCCGCACGCCCGTCACTaGTCGTCTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: RCGGASLPARPHARH*SSDTLCCEAVSSRP
Trigger: GGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGGCCGGGCGGGGAGGCTGGCTCCCCCACACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR TCA 90 bp GGGAGCCAGCCTCCCCGCCCGGCCGCACGCCCGTCACTGCTCGTCTaGCACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTC +
Preference number: 1 (lower is better)
Translates to: GSQPPRPAARPSLLV*HTLLRGRVVQAHVL
Trigger: GAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGGCCGGGCGGGGAGGCTGGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR GCA 90 bp CCCGCCCGGCCGCACGCCCGTCACTGCTCGTCTGACACACTTTGCTaGGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTC +
Preference number: 1 (lower is better)
Translates to: PARPHARHCSSDTLC*EAVSSRPMSSWLAL
Trigger: GAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGGCCGGGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR GCA 90 bp CTCCCCGCCCGGCCGCACGCCCGTCACTGCTCGTCTGACACACTTTaGTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCT +
Preference number: 1 (lower is better)
Translates to: LPARPHARHCSSDTL*CEAVSSRPMSSWLA
Trigger: AGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGGCCGGGCGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR GCA 90 bp GCTGAGAGTGCAGGGACGTGGCCGAGGCGTGCAAGGAGAGCCGGCTaGCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCT +
Preference number: 1 (lower is better)
Translates to: AESAGTWPRRARRAG*PRASGPARALRWTS
Trigger: AGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGCTCTCCTTGCACGCCTCGGCCACGTCCCTGCACTCTCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 90 bp CACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGTTGGACAGCACTaGGCCCCGCCAGGCCGGGTCGCCCTCGTGGCAGATGACCACCTT +
Preference number: 1 (lower is better)
Translates to: HHVPQGEQLFLVGQH*APPGRVALVADDHL
Trigger: AAGGTGGTCATCTGCCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 90 bp GACGTGGCCGAGGCGTGCAAGGAGAGCCGGCTGCCCGAGAGCCTCTaGGCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGG +
Preference number: 1 (lower is better)
Translates to: DVAEACKESRLPESL*ASSCTEVDVWRNVW
Trigger: CCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGCTCTCCTTGCACGCCTCGGCCACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 90 bp GCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCTaGAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATC +
Preference number: 1 (lower is better)
Translates to: ARPCRPGPCPPGLLS*RQPRECPPQPQPDI
Trigger: GATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR GCA 90 bp GCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTaGTGGCGGCCCACCAATCGCCTGGACTACAGTGAGGAGCATTGT +
Preference number: 1 (lower is better)
Translates to: AGLGEQARVPVKPAG*WRPTNRLDYSEEHC
Trigger: ACAATGCTCCTCACTGTAGTCCAGGCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 90 bp ACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTaGTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGC +
Preference number: 1 (lower is better)
Translates to: TLLRGRVVQAHVLLA*SPADNPESVRHSLS
Trigger: GCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR GCA 90 bp GCGTGCAAGGAGAGCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTaGACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAG +
Preference number: 1 (lower is better)
Translates to: ACKESRLPESLWASS*TEVDVWRNVWRLSK
Trigger: CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGCTCTCCTTGCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 90 bp AGAGCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTaGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGATGGGGCCAG +
Preference number: 1 (lower is better)
Translates to: RAGCPRASGPARALR*TSGGMFGGSLRWGQ
Trigger: CTGGCCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 90 bp GGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTaGCGGCCCACCAATCGCCTGGACTACAGTGAGGAGCATTGTGTG +
Preference number: 1 (lower is better)
Translates to: GLGEQARVPVKPAGC*RPTNRLDYSEEHCV
Trigger: CACACAATGCTCCTCACTGTAGTCCAGGCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTCACAGGGACGCGTGCTTGTTCTCCAAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR CCA 90 bp ATGGCTGCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCTTaGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCC +
Preference number: 1 (lower is better)
Translates to: MAAILWLLVGRPAQP*LPLAGRYFPGELFP
Trigger: GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGCAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR GCA 90 bp GTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTaGTGGCGGGCATTGCAATCCTTCCGCATCCTTACCCACTTGGTC +
Preference number: 1 (lower is better)
Translates to: VGAPPPSTSSMLPPL*WRALQSFRILTHLV
Trigger: GACCAAGTGGGTAAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 90 bp TGCCACCTGTCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTTaGCGCCACTGTGCTGGCGGGCATTGCAATCCTTCCGCATCCTTA +
Preference number: 1 (lower is better)
Translates to: CHLSSGPLLRPRLQC*RHCAGGHCNPSASL
Trigger: TAAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 90 bp GGGGCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTGCTaGCGGGCATTGCAATCCTTCCGCATCCTTACCCACTTGGTCCAG +
Preference number: 1 (lower is better)
Translates to: GAPPPSTSSMLPPLC*RALQSFRILTHLVQ
Trigger: CTGGACCAAGTGGGTAAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 90 bp CTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTaGCGGCTCTCTAAGATGGGGCCAGATGAGCTCAGCATGGGCGGC +
Preference number: 1 (lower is better)
Translates to: LWASSCTEVDVWRNV*RLSKMGPDELSMGG
Trigger: GCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 90 bp CTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCTaGAGGAATGTTTGGCGGCTCTCTAAGATGGGGCCAGATGAGCTC +
Preference number: 1 (lower is better)
Translates to: LPESLWASSCTEVDV*RNVWRLSKMGPDEL
Trigger: GAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR TCA 90 bp GAAGCCCGCAGGGTGCTGGCGGCCCACCAATCGCCTGGACTACAGTaGGGAGCATTGTGTGACTCCGCGGTGGATTTCCATGCACCGAAT +
Preference number: 1 (lower is better)
Translates to: EARRVLAAHQSPGLQ*GALCDSAVDFHAPN
Trigger: ATTCGGTGCATGGAAATCCACCGCGGAGTCACACAATGCTCCTCACTGTAGTCCAGGCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 90 bp TGGCCATATTGTGAGCGGCTGTTCCCAGAGCTCTCCTCCCCAGGGTaGACAGGGCGAAGGACAGAGTCACCAAGGGAGAGTCCTCGTCAC +
Preference number: 1 (lower is better)
Translates to: WPYCERLFPELSSPG*TGRRTESPRESPRH
Trigger: GTGACGAGGACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAGCTCTGGGAACAGCCGCTCACAATATGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 90 bp TTCAGATTCTGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTaGGCAGCGCTGTGCCTGGCCAGGGAGGTGTGGTGTGGCTTCTTT +
Preference number: 1 (lower is better)
Translates to: FRFWNMCGAVRGVPL*AALCLAREVWCGFF
Trigger: AAAGAAGCCACACCACACCTCCCTGGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCAGAATCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR CCA 90 bp CAAAGGTGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTaGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTGGCG +
Preference number: 1 (lower is better)
Translates to: QRCVRCCVHSKGCGA*RTSTRPCEARRVLA
Trigger: CGCCAGCACCCTGCGGGCTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACACCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR CCA 90 bp GGAATGTTTGGCGGCTCTCTAAGATGGGGCCAGATGAGCTCAGCATaGGCGGCCTTTGGCTTAGCGCTGAGTGTGCCTGCACGGACTGGC +
Preference number: 1 (lower is better)
Translates to: GMFGGSLRWGQMSSA*AAFGLALSVPARTG
Trigger: GCCAGTCCGTGCAGGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 90 bp GCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGATaGGGCCAGATGAGCTCAGCATGGGCGGCCTTTGGCTTAGCGCTG +
Preference number: 1 (lower is better)
Translates to: ALRWTSGGMFGGSLR*GQMSSAWAAFGLAL
Trigger: CAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR TCA 90 bp CCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTaGTTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGG +
Preference number: 1 (lower is better)
Translates to: PQEESLMDRGIGWLW*FGEHEGEQCRWEVW
Trigger: CCACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR TCA 90 bp GGACAGCCTGGGGGTTCCAGGAAAGCCCATAAATCTCCCCTTCCATaGAAGGTGGCACCCATGGCTGCAATCCTGTGGCTCCTTGTAGGG +
Preference number: 1 (lower is better)
Translates to: GQPGGSRKAHKSPLP*KVAPMAAILWLLVG
Trigger: CCCTACAAGGAGCCACAGGATTGCAGCCATGGGTGCCACCTTTCATGGAAGGGGAGATTTATGGGCTTTCCTGGAACCCCCAGGCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR TCA 90 bp GCTGGCGGCCCACCAATCGCCTGGACTACAGTGAGGAGCATTGTGTaGCTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTA +
Preference number: 1 (lower is better)
Translates to: AGGPPIAWTTVRSIV*LRGGFPCTEWTQFL
Trigger: TAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCACACAATGCTCCTCACTGTAGTCCAGGCGATTGGTGGGCCGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 90 bp TGCCCCTGCTCGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTaGTTCCAAAGAGAAGAGAGAAACAGTGAACAGCTCAGCAAACGT +
Preference number: 1 (lower is better)
Translates to: CPCSVASGGSHGSER*FQREERNSEQLSKR
Trigger: ACGTTTGCTGAGCTGTTCACTGTTTCTCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCGAGCAGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR GCA 90 bp GATGACCACCTTCTTCTCGAAGGACTGGATGGCCTCGTAGAGGACTaGTGGGTCTTCATACTCGTCAGGGCAAGTGAACTGGTCCTGGTG +
Preference number: 1 (lower is better)
Translates to: DDHLLLEGLDGLVED*WVFILVRASELVLV
Trigger: CACCAGGACCAGTTCACTTGCCCTGACGAGTATGAAGACCCAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGAAGAAGGTGGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 90 bp CAGCTCTCCTTTTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTaGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAG +
Preference number: 1 (lower is better)
Translates to: QLSFSTGGVPHGSRY*LVVVIWGARGRAMQ
Trigger: CTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAAAAGGAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR CCA 90 bp GACCACCTTCTTCTCGAAGGACTGGATGGCCTCGTAGAGGACTGCTaGGTCTTCATACTCGTCAGGGCAAGTGAACTGGTCCTGGTGAAG +
Preference number: 1 (lower is better)
Translates to: DHLLLEGLDGLVEDC*VFILVRASELVLVK
Trigger: CTTCACCAGGACCAGTTCACTTGCCCTGACGAGTATGAAGACCCAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGAAGAAGGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 90 bp TTTCAAAAACAAAGGTGTGTGCGATGTTGTGTGCACAGTAAGGGTTaGGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGG +
Preference number: 1 (lower is better)
Translates to: FQKQRCVRCCVHSKG*GAWRTSTRPCEARR
Trigger: CCTGCGGGCTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACACCTTTGTTTTTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR CCA 90 bp CTGTGTTCTGGAACAGCTCTCCTTTTCCACAGGAGGAGTCCCTCATaGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGG +
Preference number: 1 (lower is better)
Translates to: LCSGTALLFHRRSPS*IAVLVGCGDLGSTR
Trigger: CCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAAAAGGAGAGCTGTTCCAGAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR TCA 90 bp GGTGTAGGGCAGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTaGCTCCTTTCAGTGCCTGCCTGGGCATTATCGTTTACAGGATAT +
Preference number: 1 (lower is better)
Translates to: GVGQMATVLQNLCIR*LLSVPAWALSFTGY
Trigger: ATATCCTGTAAACGATAATGCCCAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCTGCCCTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR CCA 90 bp ACCAATCGCCTGGACTACAGTGAGGAGCATTGTGTGACTCCGCGGTaGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACATCC +
Preference number: 1 (lower is better)
Translates to: TNRLDYSEEHCVTPR*ISMHRMDSVSKLTS
Trigger: GGATGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCACACAATGCTCCTCACTGTAGTCCAGGCGATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR TCA 90 bp GTAGTCAGTGTCACTTCATGCACACTTAGCCCCTGTCATGAATGCTaGGTTCTAGCAGGCTTGACCCCAGTAGAACACAGAGGCCATTGT +
Preference number: 1 (lower is better)
Translates to: VVSVTSCTLSPCHEC*VLAGLTPVEHRGHC
Trigger: ACAATGGCCTCTGTGTTCTACTGGGGTCAAGCCTGCTAGAACTCAGCATTCATGACAGGGGCTAAGTGTGCATGAAGTGACACTGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR TCA 90 bp GCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCTGAGAAGCAGTaGAGCTCTAACTCCAGCATTGACAGGTGTCCTTTCCTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: AISAALKSNRLAEKQ*SSNSSIDRCPFLSL
Trigger: GAGGGAGAGGAAAGGACACCTGTCAATGCTGGAGTTAGAGCTTCACTGCTTCTCAGCCAATCGATTTGACTTTAAAGCTGCTGAGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR TCA 90 bp TCTCACTTCCCGTTGATGATACTCTTTGTTTTTGAGAATGGGGTGTaGAATCCACATCCAGGGATGATGCTTGCGGAGCTGAGGGAGCAC +
Preference number: 1 (lower is better)
Translates to: SHFPLMILFVFENGV*NPHPGMMLAELREH
Trigger: GTGCTCCCTCAGCTCCGCAAGCATCATCCCTGGATGTGGATTTCACACCCCATTCTCAAAAACAAAGAGTATCATCAACGGGAAGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR TCA 90 bp AAACCGGGTTGCAGAATGATGTCCGCAACAGCTTCATGCCAGCAATaGTCATCAGAAAAATGTCCCAGTGGGTACCAAGTCTCCGGTGAT +
Preference number: 1 (lower is better)
Translates to: KPGCRMMSATASCQQ*SSEKCPSGYQVSGD
Trigger: ATCACCGGAGACTTGGTACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
3UTR GCA 90 bp GACTCCTTTCAGTGCCTGCCTGGGCATTATCGTTTACAGGATATCTaGTCTGTATCTTGTCTGCTTTCAAGAGCAGCTAAGCCACTTCGT +
Preference number: 1 (lower is better)
Translates to: DSFQCLPGHYRLQDI*SVSCLLSRAAKPLR
Trigger: ACGAAGTGGCTTAGCTGCTCTTGAAAGCAGACAAGATACAGAGCAGATATCCTGTAAACGATAATGCCCAGGCAGGCACTGAAAGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR GCA 90 bp CTGGAGACACGGGACGTAGTCATCATCAATGTTAATGTTGAACATTaGAAGGTCACGCTCAATGTAATGCCACTTGGCAAAGGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: LETRDVVIINVNVEH*KVTLNVMPLGKGLQ
Trigger: CTGCAGCCCTTTGCCAAGTGGCATTACATTGAGCGTGACCTTGCAATGTTCAACATTAACATTGATGATGACTACGTCCCGTGTCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 90 bp CTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATaGATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCT +
Preference number: 1 (lower is better)
Translates to: LTYPGFSQNTGDMTA*MITVLVVKLPPCYA
Trigger: AGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR TCA 90 bp AATGGGCAACATCTCTCACTTCCCGTTGATGATACTCTTTGTTTTTaGGAATGGGGTGTGAAATCCACATCCAGGGATGATGCTTGCGGA +
Preference number: 1 (lower is better)
Translates to: NGQHLSLPVDDTLCF*EWGVKSTSRDDACG
Trigger: TCCGCAAGCATCATCCCTGGATGTGGATTTCACACCCCATTCTCAAAAACAAAGAGTATCATCAACGGGAAGTGAGAGATGTTGCCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR GCA 90 bp CATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTaGATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTA +
Preference number: 1 (lower is better)
Translates to: HPNVSWLFTEYWRHD*MHDHGSCCEAATML
Trigger: TAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR TCA 90 bp GGTCCCTACGACAATTGTCCATTTTGGAGAGCAGGAAGGAGAATTTaGCAGAATCCCAGAACTACACCCATAGATTGTGACTTTAACACA +
Preference number: 1 (lower is better)
Translates to: GPYDNCPFWRAGRRI*QNPRTTPIDCDFNT
Trigger: TGTGTTAAAGTCACAATCTATGGGTGTAGTTCTGGGATTCTGTCAAATTCTCCTTCCTGCTCTCCAAAATGGACAATTGTCGTAGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR TCA 90 bp GACAGTGAAGCTCAAGTTAATAAACTGGTAAACCGGGTTGCAGAATaGTGTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAAT +
Preference number: 1 (lower is better)
Translates to: DSEAQVNKLVNRVAE*CPQQLHASNDHQKN
Trigger: ATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTTTACCAGTTTATTAACTTGAGCTTCACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
3UTR CCA 90 bp TTTCTAAACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTaGAGACATGACTGCATGCATGATCACGGTTCTTGTTGTGAAGCT +
Preference number: 1 (lower is better)
Translates to: FLNSHPNVSWLFTEY*RHDCMHDHGSCCEA
Trigger: AGCTTCACAACAAGAACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGTTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR CCA 90 bp CAGAATCCCAGAACTACACCCATAGATTGTGACTTTAACACAGATTaGGGCATGGAGAAGGGTGATACTTTGTACATTTTTATTGAGGAA +
Preference number: 1 (lower is better)
Translates to: QNPRTTPIDCDFNTD*GMEKGDTLYIFIEE
Trigger: TTCCTCAATAAAAATGTACAAAGTATCACCCTTCTCCATGCCCCAATCTGTGTTAAAGTCACAATCTATGGGTGTAGTTCTGGGATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR CAA 90 bp TCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTaGTTGGACAGCACTGCGCCCCGCCAGGCCGGGTCGCCCTCGTGG +
Preference number: 2 (lower is better)
Translates to: SAPSSTTCRRVSSSS*LDSTAPRQAGSPSW
Trigger: CCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp GGTGGAGCTGGTGGAGGAGCCCAGGCTGGACCTGATGAGCGCCTCGGCCCGCTCCTTGTTGGACAGCACTaGGCCCCGCCAGGCCGGGTC +
Preference number: 2 (lower is better)
Translates to: GGAGGGAQAGPDERLGPLLVGQH*APPGRV
Trigger: GACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAG...GAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGCTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR TCA 90 bp AGCGCCTCGGCCCGCTCACGGACACTCAGGTGGCCGGTGGTGGTGACGGGCGGGCGCCCTCGTGGCAGATaGCCACCTTCTTCTCGAAGG +
Preference number: 2 (lower is better)
Translates to: SASARSRTLRWPVVVTGGRPRGR*PPSSRR
Trigger: CCTTCGAGAAGAAGGTGGTCATCTGCCACGAGGGCG...CCCGCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGAGCGGGCCGAGGCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCTGCAGGTGGGAGGTGTaGGGGAGCCAGCCTCCCCGC +
Preference number: 2 (lower is better)
Translates to: NMCGAVRGVPLWAALCLACRWEV*GSQPPR
Trigger: GCGGGGAGGCTGGCTCCCCCACACCTCCCACCTGCA...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR TCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGGTGACGGGCGGGGGCTaGGAGTGCAGGGACGTGGCC +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLVTGGG*ECRDVA
Trigger: GGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCAC...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp GGTGGAGCTGGTGGAGGAGCCCAGGCTGGACCTGATGAGCGCCTCGGCCCGCTCCGCTGCTCTCCTGGCTaGCACCACTCGGGGCATTGT +
Preference number: 2 (lower is better)
Translates to: GGAGGGAQAGPDERLGPLRCSPG*HHSGHC
Trigger: ACAATGCCCCGAGTGGTGGCAGCCAGGAGAGCAGCG...GAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGCTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp ACGAGCGCGCTGGAAAAGCTCCTCTTGCCGAAGAGGAAGCTCAGGGTGGAGCTGTGCAGGTGGGAGGTGTaGGGGAGCCAGCCTCCCCGC +
Preference number: 2 (lower is better)
Translates to: TSALEKLLLPKRKLRVELCRWEV*GSQPPR
Trigger: GCGGGGAGGCTGGCTCCCCCACACCTCCCACCTGCA...CAGCTCCACCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAGCGCGCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CAA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTaGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: HFAARPCRPGPCPPG*LSCRQPRECPPQPQ
Trigger: CTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR TCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCAGCACAGTGGCCTCTaGGGACAGGACGGGCAACTG +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLQHSGL*GQDGQL
Trigger: CAGTTGCCCGTCCTGTCCTCAGAGGCCACTGTGCTG...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCCACGTGCCGCAGGGTaGGCAGCTCTTCCTTGTTGG +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLPRAAG*AALPCW
Trigger: CCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGG...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR TCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGATGACACCCCGTGCTaGGCACCGCCTTTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSDDTPC*APPFLG
Trigger: GCCCAGAAAAGGCGGTGCTCAGCACGGGGTGTCATC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGAGCGCTGAGTGTGCCTaGACGGACTGGCTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLSAECA*TDWLLP
Trigger: AGGCAGGAGCCAGTCCGTGCAGGCACACTCAGCGCT...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCCTGCCCGAGAGCCTCTaGGCCAGCTCGTGCACTGAG +
Preference number: 2 (lower is better)
Translates to: THFAARPCRPGPCPPGLLLPESL*ASSCTE
Trigger: CTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAG...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCACGGACACTCAGGTaGCCGGTGGTGGTGACGGGC +
Preference number: 2 (lower is better)
Translates to: THFAARPCRPGPCPPGLLSRTLR*PVVVTG
Trigger: GCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGA...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CAA 90 bp CATGGCTGCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCTaGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: HGCNPVAPCRAAGPA*ASPGRKVLPWRAVS
Trigger: GGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGCAGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp GCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCTTGGCTTCCCCTGGCAGAGAGCTGTTTCCCATaGAGGAGAGGGAGGGTGACA +
Preference number: 2 (lower is better)
Translates to: AILWLLVGRPAQPWLPLAESCFP*RRGRVT
Trigger: TGTCACCCTCCCTCTCCTTCATGGGAAACAGCTCTC...TGCCAGGGGAAGCCAAGGCTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGCACGAGGGAGAGCAATaGAGGTGGGAGGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRHEGEQ*RWEVWG
Trigger: CCCCCACACCTCCCACCTGCATTGCTCTCCCTCGTG...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR GCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCCTCTCCTCCCCAGGGTaGACAGGGCGAAGGACAGAG +
Preference number: 2 (lower is better)
Translates to: THFAARPCRPGPCPPGLLLSSPG*TGRRTE
Trigger: CTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAG...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp GGAATGTTTGGCGGCTCTCTAAGATGGGGCCAGATGAGCTCAGCATGGGCGGCCCCCTCGTCCACCACGTaGCGCAGGGTGAGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: GMFGGSLRWGQMSSAWAAPSSTT*RRVSSS
Trigger: AGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGG...GGCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp TGGCTGGCAGCCCTGGCTGAGGGGCCCATCACGATGTTGACGCTGCTGGATGACGCACGGACTGGCTCCTaGCTTTCCTCCTGCCTGTTC +
Preference number: 2 (lower is better)
Translates to: WLAALAEGPITMLTLLDDARTGS*LSSCLF
Trigger: GAACAGGCAGGAGGAAAGGCAGGAGCCAGTCCGTGC...GTCATCCAGCAGCGTCAACATCGTGATGGGCCCCTCAGCCAGGGCTGCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTGGGCCAGCTCGTaGACTGAGGTGGACGTCTGG +
Preference number: 2 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLLWASS*TEVDVW
Trigger: CCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAG...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CAA 90 bp TTGCCACCTGTCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTaGCCGCCACTGTGCTGGCGGGCATTGCAATCCTTCCGCATCCTT +
Preference number: 2 (lower is better)
Translates to: LPPVVGAPPPSTSSM*PPLCWRALQSFRIL
Trigger: AAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGAAGCCCGCAGGGTaGTGGCGGCCCACCAATCGC +
Preference number: 2 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGVKPAG*WRPTNR
Trigger: GCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTCAC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR GCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGGGGCATTCTCCGTCATaGCCCGGTGTAGGGCAGATG +
Preference number: 2 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLGHSPS*PGVGQM
Trigger: CATCTGCCCTACACCGGGGCATGACGGAGAATGCCC...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp CAGGGGCTCTGCACGTGGGCCTTTCTGGATGACTGCGCTGGAAAGAGCGGCCCTGGTGGCACCCATGGCTaGAATCCTGTGGCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: QGLCTWAFLDDCAGKSGPGGTHG*NPVAPC
Trigger: ACAAGGAGCCACAGGATTGCAGCCATGGGTGCCACC...AGGGCCGCTCTTTCCAGCGCAGTCATCCAGAAAGGCCCACGTGCAGAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGCCTTTCTGGATGACTaGGCTGGAAAGAGCGGCCCT +
Preference number: 2 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSAFLDD*AGKSGP
Trigger: AGGGCCGCTCTTTCCAGCGCAGTCATCCAGAAAGGC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCCCGCACGCCCGTCACTaGTCGTCTGACACACTTTGC +
Preference number: 2 (lower is better)
Translates to: THFAARPCRPGPCPPGLLPHARH*SSDTLC
Trigger: GCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGG...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR GCA 90 bp GGTGGAGCTGGTGGAGGAGCCCAGGCTGGACCTGATGAGCGCCTCGGCCCGCTCTACCCACTCGTCACGTaGTGTTATTCTGAAGTCACC +
Preference number: 2 (lower is better)
Translates to: GGAGGGAQAGPDERLGPLYPLVT*CYSEVT
Trigger: GGTGACTTCAGAATAACAGCACGTGACGAGTGGGTA...GAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGCTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGGGCAGCGCTGTGCCTaGCCAGGGAGGTGTGGTGTG +
Preference number: 2 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGGQRCA*PGRCGV
Trigger: CACACCACACCTCCCTGGCCAGGCACAGCGCTGCCC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCAGCCTTGGCTTCCCCTaGCAGGAAGGTACTTCCCTG +
Preference number: 2 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSSLGFP*QEGTSL
Trigger: CAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCT...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp ACGAGCGCGCTGGAAAAGCTCCTCTTGCCGAAGAGGAAGCTCAGGGTGGAGCTGGCAGCTCTTCCTTGTTaGACAGCACTGCGCCCCGCC +
Preference number: 2 (lower is better)
Translates to: TSALEKLLLPKRKLRVELAALPC*TALRPA
Trigger: GGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGC...CAGCTCCACCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAGCGCGCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGGGAAGGGGCATTTGTaGGCCTGGCTTTCTAGCTGT +
Preference number: 2 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSGKGHL*AWLSSC
Trigger: ACAGCTAGAAAGCCAGGCGCACAAATGCCCCTTCCC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTTCTGCGCTGCTCTCCTaGCTGCCACCACTCGGGGCA +
Preference number: 2 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCSALLS*LPPLGA
Trigger: TGCCCCGAGTGGTGGCAGCCAGGAGAGCAGCGCAGA...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGACTGAGGTGGACGTCTaGAGGAATGTTTGGCGGCTC +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLTEVDV*RNVWRL
Trigger: GAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGT...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR TCA 90 bp GTACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGGAAAGAATCCAGGCTaGTGGCCATATTGTGAGCGG +
Preference number: 2 (lower is better)
Translates to: VLVGTLVHHVPQGEQLFLGKNPG*WPYCER
Trigger: CCGCTCACAATATGGCCATCAGCCTGGATTCTTTCC...AAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR TCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGGTGAACTGGTCCTGGTaGAGTTTCAGGGACATCCTG +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLVNWSW*SFRDIL
Trigger: CAGGATGTCCCTGAAACTTCACCAGGACCAGTTCAC...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR TCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGGCCAGCTCGTGCACTaGGGTGGACGTCTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGGQLVH*GGRLEE
Trigger: TTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR TCA 90 bp CGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAGCAGAACCACGAGGCGGGGTCAGGCTaGACACTCTTTAGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RSGPHCKQPRLSQTQQNHEAGSG*TLFSRE
Trigger: CTCCCTGCTAAAGAGTGTTCAGCCTGACCCCGCCTC...GTGGTTCTGCTGTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR TCA 90 bp CGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAGCAGAACCACGTGTCCGTGTATTGGTaGGGCGGGGTCAGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: RSGPHCKQPRLSQTQQNHVSVYW*GGVRLN
Trigger: GTTCAGCCTGACCCCGCCTCACCAATACACGGACAC...GTGGTTCTGCTGTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR GCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTCACGAGGGAGAGCAATaGAGGTGGGAGGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGHEGEQ*RWEVWG
Trigger: CCCCCACACCTCCCACCTGCATTGCTCTCCCTCGTG...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR GCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTTGGGCTGTTCTGCGCTaGTCTCCTGGCTGCCACCAC +
Preference number: 2 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGWAVLR*SPGCHH
Trigger: GTGGTGGCAGCCAGGAGAGCAGCGCAGAACAGCCCA...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGTGCAGGTGGGAGGTGTaGGGGAGCCAGCCTCCCCGC +
Preference number: 2 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLCRWEV*GSQPPR
Trigger: GCGGGGAGGCTGGCTCCCCCACACCTCCCACCTGCA...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGCTACCCACTTCTAACTaGCATCACCCCCATCCGTGC +
Preference number: 2 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRLPTSN*HHPHPC
Trigger: GCACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAG...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCGCTGCCCCTGCTCGGTaGCATCAGGGGGCTCACATG +
Preference number: 2 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESAAPAR*HQGAHM
Trigger: CATGTGAGCCCCCTGATGCCACCGAGCAGGGGCAGC...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGGTCTGGAGGAATGTTTaGCGGCTCTCTAAGATGGGG +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLVWRNV*RLSKMG
Trigger: CCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGAC...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR TCA 90 bp CAGATGAGCTCAGCATGGGCGGCCTTTGGCTTAGCGCTGAGTGTGCCTGCACGGATTGGTTGGTTGTGGTaGTTTGGGGAGCACGAGGGA +
Preference number: 2 (lower is better)
Translates to: QMSSAWAAFGLALSVPARIGWLW*FGEHEG
Trigger: TCCCTCGTGCTCCCCAAATCACCACAACCAACCAAT...CCGTGCAGGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp CAGATGAGCTCAGCATGGGCGGCCTTTGGCTTAGCGCTGAGTGTGCCTGCACGGTATTGTTCTGGATACTaGCGCGCTCCGGATTGCGGT +
Preference number: 2 (lower is better)
Translates to: QMSSAWAAFGLALSVPARYCSGY*RAPDCG
Trigger: ACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATA...CCGTGCAGGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGTGGAAAAGCTCCTCTTaGCGAAGAGGAAGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLWKSSS*RRGSSG
Trigger: CCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCA...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTTGGTTGTGGTGATTTaGGGAGCACGAGGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: THFAARPCRPGPCPPGLLLVVVI*GARGRA
Trigger: TGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGAGGAGGAGTCCCTCATaGATCGCGGTATTGGTTGGT +
Preference number: 2 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLRRSPS*IAVLVG
Trigger: ACCAACCAATACCGCGATCCATGAGGGACTCCTCCT...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CCA 90 bp AAGGTGGCACCCATGGCTGCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGAACACTCAAAAGGAGTaGGGGAACTCTCCAAACCTG +
Preference number: 2 (lower is better)
Translates to: KVAPMAAILWLLVGRPAQNTQKE*GNSPNL
Trigger: CAGGTTTGGAGAGTTCCCCCACTCCTTTTGAGTGTT...CTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGCAGCCATGGGTGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCGAGAGTGCAGGGACGTaGCCGAGGCGTGCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESESAGT*PRRARR
Trigger: TCTCCTTGCACGCCTCGGCCACGTCCCTGCACTCTC...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAACTGGGAGGGTGCCTaGCTTTGGCCCCTGTATCAA +
Preference number: 2 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHNWEGA*LWPLYQ
Trigger: TTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTT...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR TCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCGTGGGCCTTTCTGGATaGCTGCGCTGGAAAGAGCGG +
Preference number: 2 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESVGLSG*LRWKER
Trigger: CCGCTCTTTCCAGCGCAGTCATCCAGAAAGGCCCAC...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACTGGAACATGTGTGGTaGTGTCCGCGGTGTGCCGCT +
Preference number: 2 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRLEHVW*CPRCAA
Trigger: AGCGGCACACCGCGGACAGCACCACACATGTTCCAG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR GCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTCCTGGCTTGCTCTCCTaGAGACAACCCCGAGAGTGT +
Preference number: 2 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGPGLLS*RQPREC
Trigger: ACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGG...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR GCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTTCGTCTGACACACTTTaGTGCGAGGCCGTGTCGTCC +
Preference number: 2 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCSSDTL*CEAVSS
Trigger: GGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGA...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATAGGAGGAGTCCCTCATaGATCGCGGTATTGGTTGGT +
Preference number: 2 (lower is better)
Translates to: LALLQTTPRVSATASARHRRSPS*IAVLVG
Trigger: ACCAACCAATACCGCGATCCATGAGGGACTCCTCCT...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCCTGGCCAGGGAGGTGTaGTGTGGCTTCTTTGTTGCT +
Preference number: 2 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPLAREV*CGFFVA
Trigger: AGCAACAAAGAAGCCACACCACACCTCCCTGGCCAG...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGAAGCCACTGCAACTCTaGTGCTTGATGGAAAGCATG +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLKPLQL*CLMESM
Trigger: CATGCTTTCCATCAAGCACCAGAGTTGCAGTGGCTT...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGAGAGGCCATTGTATTCTaGGGGCATGTGGTCCCTACG +
Preference number: 2 (lower is better)
Translates to: RWHQGAHMARRGASKEKREAIVF*GHVVPT
Trigger: CGTAGGGACCACATGCCCCCAGAATACAATGGCCTC...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCGGAACTCTCCAAACCTaGCCCATTTTTGCCTTGACA +
Preference number: 2 (lower is better)
Translates to: THFAARPCRPGPCPPGLLGTLQT*PIFALT
Trigger: TGTCAAGGCAAAAATGGGTCAGGTTTGGAGAGTTCC...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTAAGGTCAAACTCCTaGAGTAACCACCTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLLRSNS*SNHLFP
Trigger: AGGAAAGAGGTGGTTACTTCAGGAGTTTGACCTTAG...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGCAGGAAGGAGAATTTaGCAGAATCCCAGAACTACA +
Preference number: 2 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSAGRRI*QNPRTT
Trigger: TGTAGTTCTGGGATTCTGTCAAATTCTCCTTCCTGC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp GCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTCCCCGAGCAGGTCCCCGAGTTTaGAGGCTGAAGGGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: AKEPHMSGRTVTCEAGPRAGPRV*RLKGRG
Trigger: TCCTCTGCCCTTCAGCCTTCAAACTCGGGGACCTGC...TCGGGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490102.6
3UTR-3UTR GCA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACCAGAAAGTGTTGATTTaGGGGAAGAGCCCAAGGAGG +
Preference number: 2 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHQKVLI*GKSPRR
Trigger: CCTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTG...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR CCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCGCGGTGTGCCGCTCTaGGCAGCGCTGTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLRGVPL*AALCLA
Trigger: GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCG...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTAGAGGGCCAGCACAGTaGCCTCTGAGGACAGGACGG +
Preference number: 2 (lower is better)
Translates to: NSSANVHYPLLTGITPIRRGPAQ*PLRTGR
Trigger: CCGTCCTGTCCTCAGAGGCCACTGTGCTGGCCCTCT...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp CTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGTTCCTTTGAAGAGGACATaGAGGCCATACAGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: LVGTLVHHVPQGEQLFLVPLKRT*RPYRKE
Trigger: TTCTTTCCTGTATGGCCTCCATGTCCTCTTCAAAGG...AACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CAA 90 bp CTCTCCTTTTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTaGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTG +
Preference number: 2 (lower is better)
Translates to: LSFSTGGVPHGSRYW*VVVIWGARGRAMQV
Trigger: CACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAAAAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR TCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGGTGAGGAGCATTGTGTaGCTCCGCGGTGGATTTCCA +
Preference number: 2 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTVRSIV*LRGGFP
Trigger: TGGAAATCCACCGCGGAGTCACACAATGCTCCTCAC...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR TCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAAACCTCTGTATCCGGTaGCTCCTTTCAGTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRNLCIR*LLSVPA
Trigger: GGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTT...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATGACCCATTTTTGCCTTaGCACCATCGATTTTCCCTG +
Preference number: 2 (lower is better)
Translates to: LALLQTTPRVSATASARHDPFLP*HHRFSL
Trigger: CAGGGAAAATCGATGGTGTCAAGGCAAAAATGGGTC...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTAAATCTCCCCTTCCATaGAAGGTGGCACCCATGGCT +
Preference number: 2 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGKSPLP*KVAPMA
Trigger: AGCCATGGGTGCCACCTTTCATGGAAGGGGAGATTT...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTACTCGTCAGGGCAAGTaGACTGGTCCTGGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCTRQGK*TGPGEV
Trigger: AACTTCACCAGGACCAGTTCACTTGCCCTGACGAGT...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp AGGCCATTGTATTCTGGGGGCATGTGGTCCCTACGACAATTGTCCATTTTGGAGCACGAGGGAGAGCAATaGAGGTGGGAGGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: RPLYSGGMWSLRQLSILEHEGEQ*RWEVWG
Trigger: CCCCCACACCTCCCACCTGCATTGCTCTCCCTCGTG...CTCCAAAATGGACAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACACTCTGGGCAGCGCTGTaGCTGGCCAGGGAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTLWAAL*LAREVW
Trigger: CCACACCTCCCTGGCCAGGCACAGCGCTGCCCAGAG...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR GCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATACTCCTTTCAGTGCCTaGCTGGGCATTATCGTTTAC +
Preference number: 2 (lower is better)
Translates to: LALLQTTPRVSATASARHTPFSA*LGIIVY
Trigger: GTAAACGATAATGCCCAGGCAGGCACTGAAAGGAGT...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTTTGGTTGTGGTGATTTaGGGAGCACGAGGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGLVVVI*GARGRA
Trigger: TGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATCTTTCAGTGCCTGCCTaGGCATTATCGTTTACAGGA +
Preference number: 2 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHLSVPA*ALSFTG
Trigger: TCCTGTAAACGATAATGCCCAGGCAGGCACTGAAAG...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp ACACTGGAGAGAAGAGCTTCAGGCCATACACAACGTAACTGGGAGGGTGCCTGGTTTAGCAGGGAGTACTaGCAGCTGGCCATGACGAGG +
Preference number: 2 (lower is better)
Translates to: TLERRASGHTQRNWEGAWFSREY*QLAMTR
Trigger: CCTCGTCATGGCCAGCTGCCAGTACTCCCTGCTAAA...CCAGGCACCCTCCCAGTTACGTTGTGTATGGCCTGAAGCTCTTCTCTCCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR CAA 90 bp ACAGCTCTCCTTTTCCACAGGAGGAGTCCCTCATGGATCGCGGTATaGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCA +
Preference number: 2 (lower is better)
Translates to: TALLFHRRSPSWIAV*VGCGDLGSTRESNA
Trigger: TGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAAAAGGAGAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR TCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTTCACGGTTCTTGTTGTaGAGCTGCCACCATGTTACG +
Preference number: 2 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPSRFLL*SCHHVT
Trigger: CGTAACATGGTGGCAGCTTCACAACAAGAACCGTGA...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR TCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCCAGGCCAGAATCATGTaGGAAGAGTCCTGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESQARIM*EESCCV
Trigger: CACACAGCAGGACTCTTCTCACATGATTCTGGCCTG...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATGCTCTGTATCTTGTCTaGTTTCAAGAGCAGCTAAGC +
Preference number: 2 (lower is better)
Translates to: LALLQTTPRVSATASARHALYLV*FQEQLS
Trigger: GCTTAGCTGCTCTTGAAAGCAGACAAGATACAGAGC...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGAACCTGACCCATTTTTaGCTTGACACCATCGATTTT +
Preference number: 2 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLNLTHF*LDTIDF
Trigger: AAAATCGATGGTGTCAAGGCAAAAATGGGTCAGGTT...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTCCACTGCAACTCTGGTaGTTGATGGAAAGCATGAGC +
Preference number: 2 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGPLQLW*LMESMS
Trigger: GCTCATGCTTTCCATCAAGCACCAGAGTTGCAGTGG...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp TCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTGCTGTGGCACGTGGGCCTTTCTaGATGACTGCGCTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: SANVHYPLLTGITPIRAVARGPF*MTALER
Trigger: TCTTTCCAGCGCAGTCATCCAGAAAGGCCCACGTGC...CACAGCACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGTACTGGAGACATGACTaGATGCATGATCACGGTTCT +
Preference number: 2 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKYWRHD*MHDHGS
Trigger: AGAACCGTGATCATGCATGCAGTCATGTCTCCAGTA...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR GCA 90 bp GCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGAAGTTCCGCAGGACCTaGTTATTGTTCTGGATACTG +
Preference number: 2 (lower is better)
Translates to: ASSCTEVDVWRNVWRLSKKFRRT*LLFWIL
Trigger: CAGTATCCAGAACAATAAGCAGGTCCTGCGGAACTT...CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACTCTTTGCAAAAGCCTTaGCTCAAGGTCAGAAATCCA +
Preference number: 2 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHSLQKP*LKVRNP
Trigger: TGGATTTCTGACCTTGAGCCAAGGCTTTTGCAAAGA...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR TCA 90 bp AGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGCCATCTGCCAAGGAGCCAACGAACTGTAACTTGTaGAGCAGGTCCCCGAGTTTG +
Preference number: 2 (lower is better)
Translates to: RAEQTRETKNPKPSAKEPTNCNL*SRSPSL
Trigger: CAAACTCGGGGACCTGCTTCACAAGTTACAGTTCGT...TGGCTCCTTGGCAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490102.6
3UTR-3UTR CCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCATGGATCGCGGTATTaGTTGGTTGTGGTGATTTGG +
Preference number: 2 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTHGSRY*LVVVIW
Trigger: CCAAATCACCACAACCAACCAATACCGCGATCCATG...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR TCA 90 bp TCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTGCTGTGTTGGCTGAGAAGCAGTaGAGCTCTAACTCCAGCATT +
Preference number: 2 (lower is better)
Translates to: SANVHYPLLTGITPIRAVLAEKQ*SSNSSI
Trigger: AATGCTGGAGTTAGAGCTTCACTGCTTCTCAGCCAA...CACAGCACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR TCA 90 bp ACTGCGCAGACGATGAGATCCCATTTTAAGACATCCGTCACTGAATCTTTCATCACTGGCAGCTGGCCATaGCGAGGCAGAAGAGGAGCA +
Preference number: 2 (lower is better)
Translates to: TAQTMRSHFKTSVTESFITGSWP*RGRRGA
Trigger: TGCTCCTCTTCTGCCTCGTCATGGCCAGCTGCCAGT...GATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR GCA 90 bp TACGAGGAATGGCAAAGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGCCAGAACCCCAAGCCATCTaGCAAGGAGCCACATATGTC +
Preference number: 2 (lower is better)
Translates to: YEEWQRAEQTRETKNPKPEPQAI*QGATYV
Trigger: GACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTC...TGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCTTTGCCATTCCTCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486012.5
3UTR-3UTR CCA 90 bp GGCCAGAATCATGTGAGAAGAGTCCTGCTGTGTGAATGGGTGGAGGGCATTCTCCATGGATCGCGGTATTaGTTGGTTGTGGTGATTTGG +
Preference number: 2 (lower is better)
Translates to: GQNHVRRVLLCEWVEGILHGSRY*LVVVIW
Trigger: CCAAATCACCACAACCAACCAATACCGCGATCCATG...GAGAATGCCCTCCACCCATTCACACAGCAGGACTCTTCTCACATGATTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp AGGCCATTGTATTCTGGGGGCATGTGGTCCCTACGACAATTGTCCATTTTGGAGTGCTGTGTGAATGGGTaGAGGGCATTCTCCGTCATG +
Preference number: 2 (lower is better)
Translates to: RPLYSGGMWSLRQLSILECCVNG*RAFSVM
Trigger: CATGACGGAGAATGCCCTCCACCCATTCACACAGCA...CTCCAAAATGGACAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp GAACCAGGTCCTAATTCTGTCCAAAGTGATGGGTCCACCCCAGATGTTCTTCAGACCTGCTTATTGTTCTaGATACTGCCGCGCTCCGGA +
Preference number: 2 (lower is better)
Translates to: EPGPNSVQSDGSTPDVLQTCLLF*ILPRSG
Trigger: TCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGT...CTGAAGAACATCTGGGGTGGACCCATCACTTTGGACAGAATTAGGACCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR TCA 90 bp AAGCCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGCCCCTCCCATGAGATaGACTGCAGTAACTTGCATG +
Preference number: 2 (lower is better)
Translates to: KPSAKEPHMSGRTVTCEAAPPMR*TAVTCM
Trigger: CATGCAAGTTACTGCAGTTCATCTCATGGGAGGGGC...TGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
3UTR-3UTR GCA 90 bp AGGCCATTGTATTCTGGGGGCATGTGGTCCCTACGACAATTGTCCATTTTGGAGAGATGGCCACAGTTCTaGAGAACCTCTGTATCCGGT +
Preference number: 2 (lower is better)
Translates to: RPLYSGGMWSLRQLSILERWPQF*RTSVSG
Trigger: ACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT...CTCCAAAATGGACAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR GCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCCTCTTGTCTTTTCCGTaGACAGTGTTGAATCCATTC +
Preference number: 2 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESLLSFP*TVLNPF
Trigger: GAATGGATTCAACACTGTGCACGGAAAAGACAAGAG...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCATCCTAACGTATCCTaGCTTTTCACAGAATACTGG +
Preference number: 2 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTHPNVS*LFTEYW
Trigger: CCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATG...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CCA 90 bp AGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGCCATCTGCCAAGGAGCCATGGCAGAATGAGGAATaGCAAAGAGCTGAGCAAACA +
Preference number: 2 (lower is better)
Translates to: RAEQTRETKNPKPSAKEPWQNEE*QRAEQT
Trigger: TGTTTGCTCAGCTCTTTGCCATTCCTCATTCTGCCA...TGGCTCCTTGGCAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
3UTR-3UTR GCA 90 bp AGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGCCATCTGCCAAGGAGCCATCCCATGAGATGAACTaGAGTAACTTGCATGGTTTG +
Preference number: 2 (lower is better)
Translates to: RAEQTRETKNPKPSAKEPSHEMN*SNLHGL
Trigger: CAAACCATGCAAGTTACTGCAGTTCATCTCATGGGA...TGGCTCCTTGGCAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
3UTR-3UTR CCA 90 bp GGCCCAAAGTCCTCGGACGCATTCTTTGTTAACCTTGATCACCTTGAAGCTCAGCATGGATCGCGGTATTaGTTGGTTGTGGTGATTTGG +
Preference number: 2 (lower is better)
Translates to: GPKSSDAFFVNLDHLEAQHGSRY*LVVVIW
Trigger: CCAAATCACCACAACCAACCAATACCGCGATCCATG...CTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp TTGAAGAGGACATGGAGGCCATACAGGAAAGAATCCAGGCTGATGGCCATATTGCAATGTAATGCCACTTaGCAAAGGGCTGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: LKRTWRPYRKESRLMAILQCNAT*QRAAGT
Trigger: AGTCCCTGCAGCCCTTTGCCAAGTGGCATTACATTG...CAATATGGCCATCAGCCTGGATTCTTTCCTGTATGGCCTCCATGTCCTCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGGCCGATGATGTAACATaGAGTTGTCTTATTTTCATC +
Preference number: 2 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTADDVT*SCLIFI
Trigger: GATGAAAATAAGACAACTGCATGTTACATCATCGGC...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CCA 90 bp GGCCCAAAGTCCTCGGACGCATTCTTTGTTAACCTTGATCACCTTGAAGCTCAGATCAGTTCTGTGTTCTaGAACAGCTCTCCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: GPKSSDAFFVNLDHLEAQISSVF*NSSPFP
Trigger: TGGAAAAGGAGAGCTGTTCCAGAACACAGAACTGAT...CTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR GCA 90 bp ACTGCGCAGACGATGAGATCCCATTTTAAGACATCCGTCACTGAATCTTTCATCGCACCCACATATCTTTaGAAAAGCCTTGGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: TAQTMRSHFKTSVTESFIAPTYL*KSLGSR
Trigger: CCTTGAGCCAAGGCTTTTGCAAAGATATGTGGGTGC...GATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR TCA 90 bp ATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGTTGTATTGGTTGGTTGTGGTaGTTTGGGGAGCACGAGGGA +
Preference number: 2 (lower is better)
Translates to: MQLSYFHQGICFMALLSCIGWLW*FGEHEG
Trigger: TCCCTCGTGCTCCCCAAATCACCACAACCAACCAAT...ACAACTCAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR TCA 90 bp CAGAATGATGTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCGGGAAACCAGGACAATaGGTAAAATCGCCAGTACAT +
Preference number: 2 (lower is better)
Translates to: QNDVRNSFMPAMIIRKMSGKPGQ*VKSPVH
Trigger: ATGTACTGGCGATTTTACTCATTGTCCTGGTTTCCC...GGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR GCA 90 bp GAACCAGGTCCTAATTCTGTCCAAAGTGATGGGTCCACCCCAGATGTTCTTCAGGTTAATGTTGAACATTaGAAGGTCACGCTCAATGTA +
Preference number: 2 (lower is better)
Translates to: EPGPNSVQSDGSTPDVLQVNVEH*KVTLNV
Trigger: TACATTGAGCGTGACCTTGCAATGTTCAACATTAAC...CTGAAGAACATCTGGGGTGGACCCATCACTTTGGACAGAATTAGGACCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CCA 90 bp GCTCCAGCCAAGGCAAACAGCACGATGCTGAGAAATGGTCGCAATGACAGGAATCTATATGTTATGATTTaGTTGTGTCCGTGTATTGGT +
Preference number: 2 (lower is better)
Translates to: APAKANSTMLRNGRNDRNLYVMI*LCPCIG
Trigger: ACCAATACACGGACACAACCAAATCATAACATATAG...ATTCCTGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTGCCTTGGCTGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR TCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTGTATAAAGTGCCGATaGTGTAACATGCAGTTGTCT +
Preference number: 2 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGCIKCR*CNMQLS
Trigger: AGACAACTGCATGTTACATCATCGGCACTTTATACA...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR TCA 90 bp GGAGTTGGTGTATTTTTCCTTATTCCTCTACTTGGTACAACGAAAACCCTGGATCAAACAGCACGATGCTaGGAAATGGTCGCAATGACA +
Preference number: 2 (lower is better)
Translates to: GVGVFFLIPLLGTTKTLDQTARC*EMVAMT
Trigger: TGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTG...ATCCAGGGTTTTCGTTGTACCAAGTAGAGGAATAAGGAAAAATACACCAACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR CCA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCAATCAGTTCTGTGTTCTaGAACAGCTCTCCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: THILTYPGFSQNTGDMTAISSVF*NSSPFP
Trigger: TGGAAAAGGAGAGCTGTTCCAGAACACAGAACTGAT...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CCA 90 bp AAGAGAGAAACAGTGAACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCGCTGGTTTGGGATTCTaGACAAGTAACAGCTTATTT +
Preference number: 2 (lower is better)
Translates to: KRETVNSSANVHYPLLTGAGLGF*TSNSLF
Trigger: AAATAAGCTGTTACTTGTCCAGAATCCCAAACCAGC...GCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTTCACTGTTTCTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CCA 90 bp ACCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCTCTGAACATACACAACGTAACTaGGAGGGTGCCTGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: TLLNKMDTMKKSSKKLSEHTQRN*EGAWLW
Trigger: CCAAAGCCAGGCACCCTCCCAGTTACGTTGTGTATG...TTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR TCA 90 bp GGAGTTGGTGTATTTTTCCTTATTCCTCTACTTGGTACAACGAAAACCCTGGATGCTTCATGCCAGCAATaGTCATCAGAAAAATGTCCC +
Preference number: 2 (lower is better)
Translates to: GVGVFFLIPLLGTTKTLDASCQQ*SSEKCP
Trigger: GGGACATTTTTCTGATGATCATTGCTGGCATGAAGC...ATCCAGGGTTTTCGTTGTACCAAGTAGAGGAATAAGGAAAAATACACCAACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR TCA 90 bp ACCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCTCTGAACCACTGCGCAGACGATaGGATCCCATTTTAAGACAT +
Preference number: 2 (lower is better)
Translates to: TLLNKMDTMKKSSKKLSEPLRRR*DPILRH
Trigger: ATGTCTTAAAATGGGATCTCATCGTCTGCGCAGTGG...TTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR CCA 90 bp ACCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCTCTGAATCGAACCACATTAAATaGGCAACATCTCTCACTTCC +
Preference number: 2 (lower is better)
Translates to: TLLNKMDTMKKSSKKLSESNHIK*ATSLTS
Trigger: GGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGA...TTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR TCA 90 bp ACCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCTCTGAAGTCTGCTATATGTTATaGTTTGGTTGTGTCCGTGTA +
Preference number: 2 (lower is better)
Translates to: TLLNKMDTMKKSSKKLSEVCYML*FGCVRV
Trigger: TACACGGACACAACCAAATCATAACATATAGCAGAC...TTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR TCA 72 bp CGGCCCGCTCACGGACACTCAGGTGGCCGGTGGTGGTaGCGGGCGGGGGCTGAGAGTGCAGGGACGTGGCCG +
Preference number: 3 (lower is better)
Translates to: RPAHGHSGGRWW*RAGAESAGTWP
Trigger: CGGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGAGCGGGCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR TCA 72 bp CCTCCCCGCCCGGCCGCACGCCCGTCACTGCTCGTCTaGCACACTTTGCTGCGAGGCCGTGTCGTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: PPRPAARPSLLV*HTLLRGRVVQA
Trigger: GGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGGCCGGGCGGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR TCA 72 bp GGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTaGAGCCCGCAGGGTGCTGGCGGCCCACCAATCGCC +
Preference number: 3 (lower is better)
Translates to: GLRGLENKHASL*SPQGAGGPPIA
Trigger: GGCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 72 bp CCGCAGGGTGAGCAGCTCTTCCTTGTTGGACAGCACTaGGCCCCGCCAGGCCGGGTCGCCCTCGTGGCAGAT +
Preference number: 3 (lower is better)
Translates to: PQGEQLFLVGQH*APPGRVALVAD
Trigger: ATCTGCCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCACCCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 72 bp GAGGCGTGCAAGGAGAGCCGGCTGCCCGAGAGCCTCTaGGCCAGCTCGTGCACTGAGGTGGACGTCTGGAGG +
Preference number: 3 (lower is better)
Translates to: EACKESRLPESL*ASSCTEVDVWR
Trigger: CCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGCTCTCCTTGCACGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 72 bp AAGCTGCCCCTGCTCGGTGGCATCAGGGGGCTCACATaGCTCGGAGAGGTGCCGAGTGGCCTGGCTGGCAGC +
Preference number: 3 (lower is better)
Translates to: KLPLLGGIRGLT*LGEVPSGLAGS
Trigger: GCTGCCAGCCAGGCCACTCGGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCGAGCAGGGGCAGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 72 bp CGGCCGCACGCCCGTCACTGCTCGTCTGACACACTTTaGTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCC +
Preference number: 3 (lower is better)
Translates to: RPHARHCSSDTL*CEAVSSRPMSS
Trigger: GGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CAA 90 bp GCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCTGGATCCACGTCTTCAATGTaGCCGCCACTGTGCTGGCGG +
Preference number: 3 (lower is better)
Translates to: AGCPRASGPARALRWTSGSTSSM*PPLCWR
Trigger: CCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGA...TCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR TCA 72 bp ACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTaGGCAGCTCTTCCTTGTTGGACAGCACTGCGCCCC +
Preference number: 3 (lower is better)
Translates to: TRRHPRPPRAAG*AALPCWTALRP
Trigger: GGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR TCA 72 bp CCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTaGGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTC +
Preference number: 3 (lower is better)
Translates to: PAAREPLGQLVH*GGRLEECLAAL
Trigger: GAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 72 bp GGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTaGCTGGCCAGGGAGGTGTGGTGTGGCTTCTTTGTT +
Preference number: 3 (lower is better)
Translates to: GAVRGVPLWAAL*LAREVWCGFFV
Trigger: AACAAAGAAGCCACACCACACCTCCCTGGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 72 bp CGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTaGTCTCCTGCAGACAACCCCGAGAGTGTCCGCCAC +
Preference number: 3 (lower is better)
Translates to: RGRVVQAHVLLA*SPADNPESVRH
Trigger: GTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR GCA 72 bp CCGCACGCCCGTCACTGCTCGTCTGACACACTTTGCTaGGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: PHARHCSSDTLC*EAVSSRPMSSW
Trigger: CCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR GCA 72 bp GAGAGCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTaGACTGAGGTGGACGTCTGGAGGAATGTTTGGCGG +
Preference number: 3 (lower is better)
Translates to: ESRLPESLWASS*TEVDVWRNVWR
Trigger: CCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 72 bp GGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTaGTGGCGGCCCACCAATCGCCTGGACTACAGTGAG +
Preference number: 3 (lower is better)
Translates to: GEQARVPVKPAG*WRPTNRLDYSE
Trigger: CTCACTGTAGTCCAGGCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTCACAGGGACGCGTGCTTGTTCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 72 bp CATGCTCCACGGTTCCTTCACTGCACTGAAGCAGACTaGGTGGAGCAGGGCGGCAGCCAAGACGCTCCGGGC +
Preference number: 3 (lower is better)
Translates to: HAPRFLHCTEAD*VEQGGSQDAPG
Trigger: GCCCGGAGCGTCTTGGCTGCCGCCCTGCTCCACGCAGTCTGCTTCAGTGCAGTGAAGGAACCGTGGAGCATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR CCA 72 bp CTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTaGCCAGGGAGGTGTGGTGTGGCTTCTTTGTTGCTT +
Preference number: 3 (lower is better)
Translates to: LSAVCRSGQRCA*PGRCGVASLLL
Trigger: AAGCAACAAAGAAGCCACACCACACCTCCCTGGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR CCA 72 bp GAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTaGCGGCCCACCAATCGCCTGGACTACAGTGAGGAG +
Preference number: 3 (lower is better)
Translates to: EQARVPVKPAGC*RPTNRLDYSEE
Trigger: CTCCTCACTGTAGTCCAGGCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTCACAGGGACGCGTGCTTGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR TCA 72 bp AGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATaGAGCTGCCCCTGCTCGGTGGCATCAGGGGGCTCA +
Preference number: 3 (lower is better)
Translates to: RVSATASARHRS*SCPCSVASGGS
Trigger: TGAGCCCCCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR GCA 72 bp TGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCTaGAGACAACCCCGAGAGTGTCCGCCACAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: CRPGPCPPGLLS*RQPRECPPQPQ
Trigger: CTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR GCA 72 bp TCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTTaGCGCCACTGTGCTGGCGGGCATTGCAATCCTTCC +
Preference number: 3 (lower is better)
Translates to: SSGPLLRPRLQC*RHCAGGHCNPS
Trigger: GGAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CAA 90 bp AGCGCCTCGGCCCGCTCACGGACACTCAGGTGGCCGGTGGTGGTGACGGGCGGGCATTCTTTGTTAACCTaGATCACCTTGAAGCTCAGG +
Preference number: 3 (lower is better)
Translates to: SASARSRTLRWPVVVTGGHSLLT*ITLKLR
Trigger: CCTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATG...CCCGCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGAGCGGGCCGAGGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR TCA 72 bp GGCTGGCAGCCCTGGCTGAGGGGCCCATCACGATGTTaGCGCTGCTGGATGACTGGGTGTCACTGGTATTGC +
Preference number: 3 (lower is better)
Translates to: GWQPWLRGPSRC*RCWMTGCHWYC
Trigger: GCAATACCAGTGACACCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCCCCTCAGCCAGGGCTGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 72 bp TGTGAGCGGCTGTTCCCAGAGCTCTCCTCCCCAGGGTaGACAGGGCGAAGGACAGAGTCACCAAGGGAGAGT +
Preference number: 3 (lower is better)
Translates to: CERLFPELSSPG*TGRRTESPRES
Trigger: ACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAGCTCTGGGAACAGCCGCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CAA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACCACTCGGGGCATTGTaGCCACCTGTCGTCGGGGCC +
Preference number: 3 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRPLGAL*PPVVGA
Trigger: GGCCCCGACGACAGGTGGCAACAATGCCCCGAGTGG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 72 bp GTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTaGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGG +
Preference number: 3 (lower is better)
Translates to: VRCCVHSKGCGA*RTSTRPCEARR
Trigger: CCTGCGGGCTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR CCA 72 bp TGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTaGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGA +
Preference number: 3 (lower is better)
Translates to: CPRASGPARALR*TSGGMFGGSLR
Trigger: TCTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CAA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCAGAACACAGAGGCCATaGTATTCTGGGGGCATGTGG +
Preference number: 3 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSRTQRP*YSGGMW
Trigger: CCACATGCCCCCAGAATACAATGGCCTCTGTGTTCT...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CAA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATTGGAGCATGATGACCTaGTACTCGTCGGCACCCTCG +
Preference number: 3 (lower is better)
Translates to: LALLQTTPRVSATASARHWSMMT*YSSAPS
Trigger: CGAGGGTGCCGACGAGTACAAGGTCATCATGCTCCA...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CAA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATCGCAGGACCTGCTTATaGTTCTGGATACTGCCGCGC +
Preference number: 3 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHRRTCL*FWILPR
Trigger: GCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCG...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR TCA 72 bp AGGGTGCTGGCGGCCCACCAATCGCCTGGACTACAGTaGGGAGCATTGTGTGACTCCGCGGTGGATTTCCAT +
Preference number: 3 (lower is better)
Translates to: RVLAAHQSPGLQ*GALCDSAVDFH
Trigger: ATGGAAATCCACCGCGGAGTCACACAATGCTCCTCACTGTAGTCCAGGCGATTGGTGGGCCGCCAGCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR TCA 72 bp GTTCTCTGTGTCCCTTCACAGGATGACACCCCGTGCTaGGCACCGCCTTTTCTGGGCTGTTCTGCGCTGCTC +
Preference number: 3 (lower is better)
Translates to: VLCVPSQDDTPC*APPFLGCSALL
Trigger: GAGCAGCGCAGAACAGCCCAGAAAAGGCGGTGCTCAGCACGGGGTGTCATCCTGTGAAGGGACACAGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 72 bp ACTGAAGCAGCATCTGAGACACAGGGGCTCTGCACGTaGGCCTTTCTGGATGACTGCGCTGGAAAGAGCGGC +
Preference number: 3 (lower is better)
Translates to: TEAASETQGLCT*AFLDDCAGKSG
Trigger: GCCGCTCTTTCCAGCGCAGTCATCCAGAAAGGCCCACGTGCAGAGCCCCTGTGTCTCAGATGCTGCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CAA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAAGCAGCTCTTCCTTGTaGGACAGCACTGCGCCCCGC +
Preference number: 3 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRSSSSL*DSTAPR
Trigger: GCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCT...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CAA 90 bp GGAATGTTTGGCGGCTCTCTAAGATGGGGCCAGATGAGCTCAGCATGGGCGGCCCGCATCCTTACCCACTaGGTCCAGAACCAGGTCCTA +
Preference number: 3 (lower is better)
Translates to: GMFGGSLRWGQMSSAWAARILTH*VQNQVL
Trigger: TAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCG...GGCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CAA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGTGGTCCCTACGACAATaGTCCATTTTGGAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLWSLRQ*SILESR
Trigger: CCTGCTCTCCAAAATGGACAATTGTCGTAGGGACCA...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CAA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGAGCGCTGCCATATCCTaGAGGTCAGGTTCTAAAGTC +
Preference number: 3 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRSAAIS*RSGSKV
Trigger: GACTTTAGAACCTGACCTCAAGGATATGGCAGCGCT...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CAA 90 bp ACACTGGAGAGAAGAGCTTCAGGCCATACACAACGTAACTGGGAGGGTGCCTGGGGTTGTGTCCGTGTATaGGTGAGGCGGGGTCAGGCT +
Preference number: 3 (lower is better)
Translates to: TLERRASGHTQRNWEGAWGCVRV*VRRGQA
Trigger: AGCCTGACCCCGCCTCACCAATACACGGACACAACC...CCAGGCACCCTCCCAGTTACGTTGTGTATGGCCTGAAGCTCTTCTCTCCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR CCA 72 bp AGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTaGCGGCTCTCTAAGATGGGGCCAGATGAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: SSCTEVDVWRNV*RLSKMGPDELS
Trigger: GCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CAA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGTCATGGATCGCGGTATaGGTTGGTTGTGGTGATTTG +
Preference number: 3 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLSWIAV*VGCGDL
Trigger: CAAATCACCACAACCAACCAATACCGCGATCCATGA...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CAA 90 bp GCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGCACTGTCCAGGGTCGTaGAAGGCTCTTGTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: ASSCTEVDVWRNVWRLSKHCPGS*KALVFS
Trigger: GGAAAAGACAAGAGCCTTCAACGACCCTGGACAGTG...CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR TCA 72 bp GGGGGTTCCAGGAAAGCCCATAAATCTCCCCTTCCATaGAAGGTGGCACCCATGGCTGCAATCCTGTGGCTC +
Preference number: 3 (lower is better)
Translates to: GGSRKAHKSPLP*KVAPMAAILWL
Trigger: GAGCCACAGGATTGCAGCCATGGGTGCCACCTTTCATGGAAGGGGAGATTTATGGGCTTTCCTGGAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR GCA 72 bp CGTCTTCAATGTTGCCGCCACTGTGCTGGCGGGCATTaGAATCCTTCCGCATCCTTACCCACTTGGTCCAGA +
Preference number: 3 (lower is better)
Translates to: RLQCCRHCAGGH*NPSASLPTWSR
Trigger: TCTGGACCAAGTGGGTAAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR GCA 72 bp AGGCCACAGAAGGCCGAAAACAGTGCCGGGATGTGTTaGATGCTCCACGGTTCCTTCACTGCACTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: RPQKAENSAGMC*MLHGSFTALKQ
Trigger: CTGCTTCAGTGCAGTGAAGGAACCGTGGAGCATGCAACACATCCCGGCACTGTTTTCGGCCTTCTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR CCA 72 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTaGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGT +
Preference number: 3 (lower is better)
Translates to: PHGSRYWLVVVI*GARGRAMQVGG
Trigger: ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CAA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATCCTCGGACGCATTCTTaGTTAACCTTGATCACCTTG +
Preference number: 3 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHPRTHS*LTLITL
Trigger: CAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGG...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR TCA 72 bp CCACCAATCGCCTGGACTACAGTGAGGAGCATTGTGTaGCTCCGCGGTGGATTTCCATGCACCGAATGGACT +
Preference number: 3 (lower is better)
Translates to: PPIAWTTVRSIV*LRGGFPCTEWT
Trigger: AGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCACACAATGCTCCTCACTGTAGTCCAGGCGATTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 72 bp CAAAGGTGTGTGCGATGTTGTGTGCACAGTAAGGGTTaGGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAA +
Preference number: 3 (lower is better)
Translates to: QRCVRCCVHSKG*GAWRTSTRPCE
Trigger: TTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACACCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CAA 90 bp AGGAATGGCAAAGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGCCATCTGAGCAGGTCCCCGAGTTaGAAGGCTGAAGGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: RNGKELSKHVKRRTPSHLSRSPS*KAEGQR
Trigger: CCTCTGCCCTTCAGCCTTCAAACTCGGGGACCTGCT...CAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCTTTGCCATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490102.6
3UTR GCA 72 bp CTTCTTCTCGAAGGACTGGATGGCCTCGTAGAGGACTaGTGGGTCTTCATACTCGTCAGGGCAAGTGAACTG +
Preference number: 3 (lower is better)
Translates to: LLLEGLDGLVED*WVFILVRASEL
Trigger: CAGTTCACTTGCCCTGACGAGTATGAAGACCCAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CCA 72 bp TTTTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTaGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: FSTGGVPHGSRY*LVVVIWGARGR
Trigger: TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR CCA 72 bp GGAACAGCTCTCCTTTTCCACAGGAGGAGTCCCTCATaGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGG +
Preference number: 3 (lower is better)
Translates to: GTALLFHRRSPS*IAVLVGCGDLG
Trigger: CCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAAAAGGAGAGCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR CCA 72 bp CCTCACCCAGAACCAGAGGCCAAGCCACTGCAACTCTaGTGCTTGATGGAAAGCATGAGCCATGGTAAGGAA +
Preference number: 3 (lower is better)
Translates to: PHPEPEAKPLQL*CLMESMSHGKE
Trigger: TTCCTTACCATGGCTCATGCTTTCCATCAAGCACCAGAGTTGCAGTGGCTTGGCCTCTGGTTCTGGGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR CCA 72 bp CTGGAGAGAAGAGCTTCAGGCCATACACAACGTAACTaGGAGGGTGCCTGGCTTTGGCCCCTGTATCAAGAA +
Preference number: 3 (lower is better)
Translates to: LERRASGHTQRN*EGAWLWPLYQE
Trigger: TTCTTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTTACGTTGTGTATGGCCTGAAGCTCTTCTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR TCA 72 bp CAGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTaGCTCCTTTCAGTGCCTGCCTGGGCATTATCGTTT +
Preference number: 3 (lower is better)
Translates to: QMATVLQNLCIR*LLSVPAWALSF
Trigger: AAACGATAATGCCCAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR TCA 72 bp CAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTaGAGCAGGTCCCCGAGTTTGAAGGCTGAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: QGATYVRTNCNL*SRSPSLKAEGQ
Trigger: CTGCCCTTCAGCCTTCAAACTCGGGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
3UTR TCA 72 bp GAAATGGTCGCAATGACAGGAATACAGTGCTGGCGCTaGCTGCAAATGAGAGGACAGCAACCACTGCGCAGA +
Preference number: 3 (lower is better)
Translates to: EMVAMTGIQCWR*LQMRGQQPLRR
Trigger: TCTGCGCAGTGGTTGCTGTCCTCTCATTTGCAGTCAGCGCCAGCACTGTATTCCTGTCATTGCGACCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR GCA 72 bp CACCCAGAACCAGAGGCCAAGCCACTGCAACTCTGGTaGTTGATGGAAAGCATGAGCCATGGTAAGGAAAAC +
Preference number: 3 (lower is better)
Translates to: HPEPEAKPLQLW*LMESMSHGKEN
Trigger: GTTTTCCTTACCATGGCTCATGCTTTCCATCAAGCACCAGAGTTGCAGTGGCTTGGCCTCTGGTTCTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CAA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTCATGGATCGCGGTATaGGTTGGTTGTGGTGATTTG +
Preference number: 3 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESSWIAV*VGCGDL
Trigger: CAAATCACCACAACCAACCAATACCGCGATCCATGA...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR-3UTR CAA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACTATGTTATGATTTGGTaGTGTCCGTGTATTGGTGAG +
Preference number: 3 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHYVMIW*CPCIGE
Trigger: CTCACCAATACACGGACACAACCAAATCATAACATA...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR CAA 90 bp GCTCCAGCCAAGGCAAACAGCACGATGCTGAGAAATGGTCGCAATGACAGGAATGAATCTTTCATCTTCTaGGGGAGAGGGTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: APAKANSTMLRNGRNDRNESFIF*GRGSAA
Trigger: AGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTC...ATTCCTGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTGCCTTGGCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR GCA 72 bp GAATGGGGTGTGAAATCCACATCCAGGGATGATGCTTaGGGAGCTGAGGGAGCACGTAATGTGTTACAAACC +
Preference number: 3 (lower is better)
Translates to: EWGVKSTSRDDA*GAEGARNVLQT
Trigger: GGTTTGTAACACATTACGTGCTCCCTCAGCTCCGCAAGCATCATCCCTGGATGTGGATTTCACACCCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR-3UTR CAA 90 bp AGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGTATCTGCTCTGTATCTaGTCTGCTTTCAAGAGCAGC +
Preference number: 3 (lower is better)
Translates to: RWPQFCRTSVSGDSFQCLYLLCI*SAFKSS
Trigger: GCTGCTCTTGAAAGCAGACAAGATACAGAGCAGATA...CAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR TCA 72 bp GTCACTTCATGCACACTTAGCCCCTGTCATGAATGCTaGGTTCTAGCAGGCTTGACCCCAGTAGAACACAGA +
Preference number: 3 (lower is better)
Translates to: VTSCTLSPCHEC*VLAGLTPVEHR
Trigger: TCTGTGTTCTACTGGGGTCAAGCCTGCTAGAACTCAGCATTCATGACAGGGGCTAAGTGTGCATGAAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR GCA 72 bp TTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTaGCTGCCTGGGCATTATCGTTTACAGGATATCTGC +
Preference number: 3 (lower is better)
Translates to: FCRTSVSGDSFQ*LPGHYRLQDIC
Trigger: GCAGATATCCTGTAAACGATAATGCCCAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR CCA 72 bp CTGGACTACAGTGAGGAGCATTGTGTGACTCCGCGGTaGATTTCCATGCACCGAATGGACTCAGTTTCTAAA +
Preference number: 3 (lower is better)
Translates to: LDYSEEHCVTPR*ISMHRMDSVSK
Trigger: TTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCACACAATGCTCCTCACTGTAGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR CCA 72 bp AGTAGAACACAGAGGCCATTGTATTCTGGGGGCATGTaGTCCCTACGACAATTGTCCATTTTGGAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: SRTQRPLYSGGM*SLRQLSILESR
Trigger: CCTGCTCTCCAAAATGGACAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCTCTGTGTTCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CAA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGGATCGCGGTATTGGTaGGTTGTGGTGATTTGGGGA +
Preference number: 3 (lower is better)
Translates to: CICPADGIRRAAVHFFFMGSRYW*VVVIWG
Trigger: TCCCCAAATCACCACAACCAACCAATACCGCGATCC...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 72 bp CCTGGCTTTTCACAGAATACTGGAGACATGACTGCATaGATGATCACGGTTCTTGTTGTGAAGCTGCCACCA +
Preference number: 3 (lower is better)
Translates to: PGFSQNTGDMTA*MITVLVVKLPP
Trigger: TGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CAA 90 bp GTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCCAGTGGGTAATCTTTGCAAAAGCCTaGGCTCAAGGTCAGAAATCC +
Preference number: 3 (lower is better)
Translates to: VRNSFMPAMIIRKMSQWVIFAKA*AQGQKS
Trigger: GGATTTCTGACCTTGAGCCAAGGCTTTTGCAAAGAT...TACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR TCA 72 bp CTGCAAATGAGAGGACAGCAACCACTGCGCAGACGATaGGATCCCATTTTAAGACATCCGTCACTGAATCTT +
Preference number: 3 (lower is better)
Translates to: LQMRGQQPLRRR*DPILRHPSLNL
Trigger: AAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGTGGTTGCTGTCCTCTCATTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR GCA 72 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTaGATGCATGATCACGGTTCTTGTTGTGAAGCTGCC +
Preference number: 3 (lower is better)
Translates to: VSWLFTEYWRHD*MHDHGSCCEAA
Trigger: GGCAGCTTCACAACAAGAACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 72 bp CAGTGCCTGCCTGGGCATTATCGTTTACAGGATATCTaGTCTGTATCTTGTCTGCTTTCAAGAGCAGCTAAG +
Preference number: 3 (lower is better)
Translates to: QCLPGHYRLQDI*SVSCLLSRAAK
Trigger: CTTAGCTGCTCTTGAAAGCAGACAAGATACAGAGCAGATATCCTGTAAACGATAATGCCCAGGCAGGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CAA 90 bp GGAGTTGGTGTATTTTTCCTTATTCCTCTACTTGGTACAACGAAAACCCTGGATGCAGAAAGTGTTGATTaGCGGGAAGAGCCCAAGGAG +
Preference number: 3 (lower is better)
Translates to: GVGVFFLIPLLGTTKTLDAESVD*REEPKE
Trigger: CTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTGC...ATCCAGGGTTTTCGTTGTACCAAGTAGAGGAATAAGGAAAAATACACCAACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR TCA 72 bp GCTCAAGTTAATAAACTGGTAAACCGGGTTGCAGAATaGTGTCCGCAACAGCTTCATGCCAGCAATGATCAT +
Preference number: 3 (lower is better)
Translates to: AQVNKLVNRVAE*CPQQLHASNDH
Trigger: ATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTTTACCAGTTTATTAACTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
3UTR GCA 72 bp TTTAATTTCAAAAACAAAGGTGTGTGCGATGTTGTGTaGACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCA +
Preference number: 3 (lower is better)
Translates to: FNFKNKGVCDVV*TVRVAGLGEQA
Trigger: TGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACACCTTTGTTTTTGAAATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CAA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGTTTTCATCAGGGCATTaGTTTCATGGCTCTGTTGAG +
Preference number: 3 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLFSSGH*FHGSVE
Trigger: CTCAACAGAGCCATGAAACAAATGCCCTGATGAAAA...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR-3UTR CAA 90 bp GGAGTTGGTGTATTTTTCCTTATTCCTCTACTTGGTACAACGAAAACCCTGGATAGGAAACAGCCTGCATaGGATGAAGGACATGAGTAC +
Preference number: 3 (lower is better)
Translates to: GVGVFFLIPLLGTTKTLDRKQPA*DEGHEY
Trigger: GTACTCATGTCCTTCATCCAATGCAGGCTGTTTCCT...ATCCAGGGTTTTCGTTGTACCAAGTAGAGGAATAAGGAAAAATACACCAACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR TCA 72 bp GACAATTGTCCATTTTGGAGAGCAGGAAGGAGAATTTaGCAGAATCCCAGAACTACACCCATAGATTGTGAC +
Preference number: 3 (lower is better)
Translates to: DNCPFWRAGRRI*QNPRTTPIDCD
Trigger: GTCACAATCTATGGGTGTAGTTCTGGGATTCTGTCAAATTCTCCTTCCTGCTCTCCAAAATGGACAATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR GCA 72 bp CGGGACGTAGTCATCATCAATGTTAATGTTGAACATTaGAAGGTCACGCTCAATGTAATGCCACTTGGCAAA +
Preference number: 3 (lower is better)
Translates to: RDVVIINVNVEH*KVTLNVMPLGK
Trigger: TTTGCCAAGTGGCATTACATTGAGCGTGACCTTGCAATGTTCAACATTAACATTGATGATGACTACGTCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR-3UTR CAA 90 bp ATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGTTGTTCATGGATCGCGGTATaGGTTGGTTGTGGTGATTTG +
Preference number: 3 (lower is better)
Translates to: MQLSYFHQGICFMALLSCSWIAV*VGCGDL
Trigger: CAAATCACCACAACCAACCAATACCGCGATCCATGA...ACAACTCAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR GCA 72 bp ATTATCGTTTACAGGATATCTGCTCTGTATCTTGTCTaGTTTCAAGAGCAGCTAAGCCACTTCGTGTCTAAT +
Preference number: 3 (lower is better)
Translates to: IIVYRISALYLV*FQEQLSHFVSN
Trigger: ATTAGACACGAAGTGGCTTAGCTGCTCTTGAAAGCAGACAAGATACAGAGCAGATATCCTGTAAACGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR-3UTR CAA 90 bp GGAGTTGGTGTATTTTTCCTTATTCCTCTACTTGGTACAACGAAAACCCTGGATAAACAGCATGTCAATTaGCTCCAAAAGATAAGTGCA +
Preference number: 3 (lower is better)
Translates to: GVGVFFLIPLLGTTKTLDKQHVN*LQKISA
Trigger: TGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT...ATCCAGGGTTTTCGTTGTACCAAGTAGAGGAATAAGGAAAAATACACCAACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR CCA 72 bp AAGCAAAATAAGGCCACACAGCACACAAAAATAGATTaGTCTGCTATATGTTATGATTTGGTTGTGTCCGTG +
Preference number: 3 (lower is better)
Translates to: KQNKATQHTKID*SAICYDLVVSV
Trigger: CACGGACACAACCAAATCATAACATATAGCAGACCAATCTATTTTTGTGTGCTGTGTGGCCTTATTTTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
3UTR CCA 72 bp AGAGTTCAAAATAAAGAAATATCTTTTAAGGCTAAGTaGCCTAAAGGGATCCAAAGTGCCTCTTCATGTCCC +
Preference number: 3 (lower is better)
Translates to: RVQNKEISFKAK*PKGIQSASSCP
Trigger: GGGACATGAAGAGGCACTTTGGATCCCTTTAGGCCACTTAGCCTTAAAAGATATTTCTTTATTTTGAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR TCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCGTGACGGGCGGGGGCTaGGAGTGCAGGGACGTGGCC +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLAVTGGG*ECRDVA
Trigger: GGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCAC...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCGCCGAGTGGCCTGGCTaGCAGCCCTGGCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLAAEWPG*QPWLRG
Trigger: GCCCCTCAGCCAGGGCTGCCAGCCAGGCCACTCGGC...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCGACGTGGCCGAGGCGTaGAAGGAGAGCCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLADVAEA*KESRLP
Trigger: GGGCAGCCGGCTCTCCTTGCACGCCTCGGCCACGTC...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GGTGGTGGTGACGGGCGGGGGCTGAGAGTGCAGGGACGTGGCCGAGGCGTGCAATGGGCTGTTCTGCGCTaGTCTCCTGGCTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: GGGDGRGLRVQGRGRGVQWAVLR*SPGCHH
Trigger: GTGGTGGCAGCCAGGAGAGCAGCGCAGAACAGCCCA...TTGCACGCCTCGGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCACCACCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GCTGGTGGAGGAGCCCAGGCTGGACCTGATGAGCGCCTCGGCCCGCTCACGGACCTCTGGGCCAGCTCGTaGACTGAGGTGGACGTCTGG +
Preference number: 4 (lower is better)
Translates to: AGGGAQAGPDERLGPLTDLWASS*TEVDVW
Trigger: CCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAG...GTCCGTGAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCGCAAGGAGAGCCGGCTaGCCGAGAGCCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLAARRAG*PRASGP
Trigger: TGGCCCAGAGGCTCTCGGGCAGCCGGCTCTCCTTGC...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GGTGGTGGTGACGGGCGGGGGCTGAGAGTGCAGGGACGTGGCCGAGGCGTGCAACACGAGGGAGAGCAATaGAGGTGGGAGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGGDGRGLRVQGRGRGVQHEGEQ*RWEVWG
Trigger: CCCCCACACCTCCCACCTGCATTGCTCTCCCTCGTG...TTGCACGCCTCGGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCACCACCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCCCTGGCTGGCAGCCCTaGCTGAGGGGCCCATCACGA +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLAPGWQP*LRGPSR
Trigger: TCGTGATGGGCCCCTCAGCCAGGGCTGCCAGCCAGG...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGGCCGAGTGGCCTGGCTaGCAGCCCTGGCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: YSSAPSSTTCRRVSSSSLAEWPG*QPWLRG
Trigger: GCCCCTCAGCCAGGGCTGCCAGCCAGGCCACTCGGC...CAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CAA 72 bp TCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTaGTTGGACAGCACTGCGCCCCGCCAGGCCGGGTCG +
Preference number: 4 (lower is better)
Translates to: SSTTCRRVSSSS*LDSTAPRQAGS
Trigger: CGACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp GCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCTGGAGCCAGACATCGGTCATaGAGCTGCCCCTGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: AGCPRASGPARALRWTSGARHRS*SCPCSV
Trigger: CACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGC...TCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCTTGGCTTCCCCTGGCACCCTCGTCCACCACGTaGCGCAGGGTGAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AILWLLVGRPAQPWLPLAPSSTT*RRVSSS
Trigger: AGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGG...TGCCAGGGGAAGCCAAGGCTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCTGCAGGTGGGAGGTGTaGGGGAGCCAGCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSCRWEV*GSQPPR
Trigger: GCGGGGAGGCTGGCTCCCCCACACCTCCCACCTGCA...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGGGCAGCGCTGTGCCTaGCCAGGGAGGTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLGQRCA*PGRCGV
Trigger: CACACCACACCTCCCTGGCCAGGCACAGCGCTGCCC...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCCCGAGTGGCCTGGCTaGCAGCCCTGGCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLPEWPG*QPWLRG
Trigger: GCCCCTCAGCCAGGGCTGCCAGCCAGGCCACTCGGG...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCGATGACACCCCGTGCTaGGCACCGCCTTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLADDTPC*APPFLG
Trigger: GCCCAGAAAAGGCGGTGCTCAGCACGGGGTGTCATC...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGTGACGGGCGGGGGCTaGGAGTGCAGGGACGTGGCC +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHVTGGG*ECRDVA
Trigger: GGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCAC...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp GGTGGTGGTGACGGGCGGGGGCTGAGAGTGCAGGGACGTGGCCGAGGCGTGCAAATGTTGCCGCCACTGTaGTGGCGGGCATTGCAATCC +
Preference number: 4 (lower is better)
Translates to: GGGDGRGLRVQGRGRGVQMLPPL*WRALQS
Trigger: GGATTGCAATGCCCGCCAGCACAGTGGCGGCAACAT...TTGCACGCCTCGGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCACCACCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCCTCTGGGCCAGCTCGTaGACTGAGGTGGACGTCTGG +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLALWASS*TEVDVW
Trigger: CCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAG...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCTTGGCTTCCCCTGGCACTCTGGGCCAGCTCGTaGACTGAGGTGGACGTCTGG +
Preference number: 4 (lower is better)
Translates to: AILWLLVGRPAQPWLPLALWASS*TEVDVW
Trigger: CCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAG...TGCCAGGGGAAGCCAAGGCTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCTTGGCTTCCCCTGGCATGTCCTGGTGAGCCCTaGCCAGCCCCTTACCCGAGT +
Preference number: 4 (lower is better)
Translates to: AILWLLVGRPAQPWLPLACPGEP*PAPYPS
Trigger: ACTCGGGTAAGGGGCTGGGCAGGGCTCACCAGGACA...TGCCAGGGGAAGCCAAGGCTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GTACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTAGGTGCCGAGTGGCCTaGCTGGCAGCCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VLVGTLVHHVPQGEQLFLRCRVA*LAALAE
Trigger: CTCAGCCAGGGCTGCCAGCCAGGCCACTCGGCACCT...AAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
3UTR CAA 72 bp GCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTaGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: ARPCRPGPCPPG*LSCRQPRECPP
Trigger: TGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp GGTGGAGCTGGTGGAGGAGCCCAGGCTGGACCTGATGAGCGCCTCGGCCCGCTCAGTGCCGGGATGTGTTaGATGCTCCACGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GGAGGGAQAGPDERLGPLSAGMC*MLHGSF
Trigger: GAAGGAACCGTGGAGCATGCAACACATCCCGGCACT...GAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGCTCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCTGGATCCAGGGATGATGCTTaGGGAGCTGAGGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: AGCPRASGPARALRWTSGSRDDA*GAEGAR
Trigger: ACGTGCTCCCTCAGCTCCGCAAGCATCATCCCTGGA...TCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCTTGGCTTCCCCTGGCACCACGTCTTCAATGTTaGCGCCACTGTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: AILWLLVGRPAQPWLPLAPRLQC*RHCAGG
Trigger: CCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGG...TGCCAGGGGAAGCCAAGGCTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTGCTGGCGGGCATTGCACTCGGGGCATTGTTaGCACCTGTCGTCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: APPPSTSSMLPPLCWRALHSGHC*HLSSGP
Trigger: GGGCCCCGACGACAGGTGGCAACAATGCCCCGAGTG...CAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp CAGATGAGCTCAGCATGGGCGGCCTTTGGCTTAGCGCTGAGTGTGCCTGCACGGGCAAGGAGAGCCGGCTaGCCGAGAGCCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QMSSAWAAFGLALSVPARARRAG*PRASGP
Trigger: TGGCCCAGAGGCTCTCGGGCAGCCGGCTCTCCTTGC...CCGTGCAGGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGACGTGGCCGAGGCGTaGAAGGAGAGCCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHDVAEA*KESRLP
Trigger: GGGCAGCCGGCTCTCCTTGCACGCCTCGGCCACGTC...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp GCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCTGGATCGTCTGACACACTTTaGTGCGAGGCCGTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: AGCPRASGPARALRWTSGSSDTL*CEAVSS
Trigger: GGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGA...TCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGTCTGCGCTGCTCTCCTaGCTGCCACCACTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLSALLS*LPPLGA
Trigger: TGCCCCGAGTGGTGGCAGCCAGGAGAGCAGCGCAGA...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp GCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTGCTGGCGGGCATTGTCAGGGTGGAGCTGGTaGAGGAGCCCAGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: APPPSTSSMLPPLCWRALSGWSW*RSPGWT
Trigger: GGTCCAGCCTGGGCTCCTCCACCAGCTCCACCCTGA...CAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGTGAGCCAGCGGAGGTaGAAGGCAGCGTTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSVSQRR*KAALQD
Trigger: GTCCTGCAACGCTGCCTTTCACCTCCGCTGGCTCAC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CAGGGGCTCTGCACGTGGGCCTTTCTGGATGACTGCGCTGGAAAGAGCGGCCCTGGCCAGCTCGTGCACTaGGGTGGACGTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QGLCTWAFLDDCAGKSGPGQLVH*GGRLEE
Trigger: TTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCC...AGGGCCGCTCTTTCCAGCGCAGTCATCCAGAAAGGCCCACGTGCAGAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CAGGGGCTCTGCACGTGGGCCTTTCTGGATGACTGCGCTGGAAAGAGCGGCCCTGCCAGACATCGGTCATaGAGCTGCCCCTGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: QGLCTWAFLDDCAGKSGPARHRS*SCPCSV
Trigger: CACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGC...AGGGCCGCTCTTTCCAGCGCAGTCATCCAGAAAGGCCCACGTGCAGAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GGTGGTGGTGACGGGCGGGGGCTGAGAGTGCAGGGACGTGGCCGAGGCGTGCAACGCCAGAGCTGTAGTTaGCCCAACGTCCAAGAACTA +
Preference number: 4 (lower is better)
Translates to: GGGDGRGLRVQGRGRGVQRQSCS*PNVQEL
Trigger: TAGTTCTTGGACGTTGGGGCAACTACAGCTCTGGCG...TTGCACGCCTCGGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCACCACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp CAGATGAGCTCAGCATGGGCGGCCTTTGGCTTAGCGCTGAGTGTGCCTGCACGGCCCTCGTCCACCACGTaGCGCAGGGTGAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QMSSAWAAFGLALSVPARPSSTT*RRVSSS
Trigger: AGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGG...CCGTGCAGGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGGACGTGGCCGAGGCGTaGAAGGAGAGCCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASSCTEVDVWRNVWRLSKDVAEA*KESRLP
Trigger: GGGCAGCCGGCTCTCCTTGCACGCCTCGGCCACGTC...CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGGAGAGTGCAGGGACGTaGCCGAGGCGTGCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLESAGT*PRRARR
Trigger: TCTCCTTGCACGCCTCGGCCACGTCCCTGCACTCTC...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGTCACGGACACTCAGGTaGCCGGTGGTGGTGACGGGC +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRSRTLR*PVVVTG
Trigger: GCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGA...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCTCAGGGTGGAGCTGGTaGAGGAGCCCAGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPSGWSW*RSPGWT
Trigger: GGTCCAGCCTGGGCTCCTCCACCAGCTCCACCCTGA...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp AGCTCTCCTCCCCAGGGTGCACAGGGCGAAGGACAGAGTCACCAAGGGAGAGTCGCTGCCCCTGCTCGGTaGCATCAGGGGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: SSPPQGAQGEGQSHQGRVAAPAR*HQGAHM
Trigger: CATGTGAGCCCCCTGATGCCACCGAGCAGGGGCAGC...GACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GGACAGCACTGCGCCCCGCCAGGCCGGGTCGCCCTCGTGGCAGATGACCACCTTAGGAGGAGTCCCTCATaGATCGCGGTATTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GQHCAPPGRVALVADDHLRRSPS*IAVLVG
Trigger: ACCAACCAATACCGCGATCCATGAGGGACTCCTCCT...AAGGTGGTCATCTGCCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTCGCGGTGTGCCGCTCTaGGCAGCGCTGTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCRGVPL*AALCLA
Trigger: GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCG...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp AAGGTGGCACCCATGGCTGCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCCCCATCCGTGCTGTaGGAGCTAAAGGCTAGCGCT +
Preference number: 4 (lower is better)
Translates to: KVAPMAAILWLLVGRPAQPPSVL*ELKASA
Trigger: AGCGCTAGCCTTTAGCTCCCACAGCACGGATGGGGG...CTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGCAGCCATGGGTGCCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR CAA 72 bp GTCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTaGCCGCCACTGTGCTGGCGGGCATTGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: VVGAPPPSTSSM*PPLCWRALQSF
Trigger: GAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp GCTGGTGGAGGAGCCCAGGCTGGACCTGATGAGCGCCTCGGCCCGCTCACGGACAACCGGGTTGCAGAATaGTGTCCGCAACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: AGGGAQAGPDERLGPLTDNRVAE*CPQQLH
Trigger: ATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTT...GTCCGTGAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGTGTCCCTTCACAGGATaGCACCCCGTGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLCPFTG*HPVLST
Trigger: GGTGCTCAGCACGGGGTGTCATCCTGTGAAGGGACA...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGCTGGCAGCCCTGGCTaGGGGGCCCATCACGATGTT +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHAGSPG*GAHHDV
Trigger: AACATCGTGATGGGCCCCTCAGCCAGGGCTGCCAGC...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGCCGTCACTGCTCGTCTaGCACACTTTGCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: YSSAPSSTTCRRVSSSSLPSLLV*HTLLRG
Trigger: GCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGG...CAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCGCACCTGGGACACCATaGCGGCTGCGCCCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESAPGTP*RLRPGA
Trigger: AGCCCCGGGGCGCAGCCGGCATGGTGTCCCAGGTGC...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCTCCCCAGGGTaGACAGGGCGAAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLLSSPG*TGRRTE
Trigger: CTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAG...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp GCTGGTGGAGGAGCCCAGGCTGGACCTGATGAGCGCCTCGGCCCGCTCACGGACAGAAATATAAGCTCCTaGTGCTGCCCGGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: AGGGAQAGPDERLGPLTDRNISS*CCPAQS
Trigger: ACTTTGGGCCGGGCAGCAGCAGGAGCTTATATTTCT...GTCCGTGAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp TTGCCACCTGTCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACCACGTCTTCAATGTTaGCGCCACTGTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LPPVVGAPPPSTSSMLPPPRLQC*RHCAGG
Trigger: CCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGG...TGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCTGGGCTGTTCTGCGCTaGTCTCCTGGCTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPWAVLR*SPGCHH
Trigger: GTGGTGGCAGCCAGGAGAGCAGCGCAGAACAGCCCA...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGCACGGACTGGCTCCTaGCTTTCCTCCTGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSARTGS*LSSCLF
Trigger: GAACAGGCAGGAGGAAAGGCAGGAGCCAGTCCGTGC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCCCGCACGCCCGTCACTaGTCGTCTGACACACTTTGC +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSPHARH*SSDTLC
Trigger: GCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGG...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGGGCATTCTCCGTCATaGCCCGGTGTAGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSGHSPS*PGVGQM
Trigger: CATCTGCCCTACACCGGGGCATGACGGAGAATGCCC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGAGCATGGGCGGCCTTTaGCTTAGCGCTGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLSMGGL*LSAECA
Trigger: GGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCT...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp GTACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTAGCATGGGCGGCCTTTaGCTTAGCGCTGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: VLVGTLVHHVPQGEQLFLSMGGL*LSAECA
Trigger: GGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCT...AAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATAGCTCAGGGTGGAGCTaGTGGAGGAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHSSGWS*WRSPGW
Trigger: CCAGCCTGGGCTCCTCCACCAGCTCCACCCTGAGCT...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGCAGGAGGTATCTACCTaGCAGGATGTGTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLQEVST*QDVSAG
Trigger: GCCAGCAGACACATCCTGTCAGGTAGATACCTCCTG...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGCCTCGTCGCCCTCCATaGTGGCTTCTACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRPRRPP*WLLPPS
Trigger: AGAGGGAGGTAGAAGCCATCATGGAGGGCGACGAGG...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGTTGCAGGACAGCAGGTaGGGCAAGTGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLLQDSR*GKWPGL
Trigger: CAAACCAGGCCACTTGCCTCACCTGCTGTCCTGCAA...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCGCCCTCGTGGCAGATaGCCACCTTCTTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLRPRGR*PPSSRR
Trigger: CCTTCGAGAAGAAGGTGGTCATCTGCCACGAGGGCG...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCAGAGAGTCCGGAAATaGCGAGCGCGCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLQRVRK*RARWKS
Trigger: GCTTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTG...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp AGCTCTCCTCCCCAGGGTGCACAGGGCGAAGGACAGAGTCACCAAGGGAGAGTCGGCCCATCACGATGTTaGCGCTGCTGGATGACTGGG +
Preference number: 4 (lower is better)
Translates to: SSPPQGAQGEGQSHQGRVGPSRC*RCWMTG
Trigger: CCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCC...GACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGAGCTGGCAGCCCTGGCTaGGGGGCCCATCACGATGTT +
Preference number: 4 (lower is better)
Translates to: RWHQGAHMARRGASKEKRAGSPG*GAHHDV
Trigger: AACATCGTGATGGGCCCCTCAGCCAGGGCTGCCAGC...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTCTTGTTGGACAGCACTaGGCCCCGCCAGGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGLVGQH*APPGRV
Trigger: GACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAG...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGACACTCGGGGCATTGTTaGCACCTGTCGTCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RWHQGAHMARRGASKEKRHSGHC*HLSSGP
Trigger: GGGCCCCGACGACAGGTGGCAACAATGCCCCGAGTG...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TCCGCAGCAGAGAGTCCGGAAATGACGAGCGCGCTGGAAAAGCTCCTCTTGCCGCGCTGCTCTCCTGGCTaGCACCACTCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SAAESPEMTSALEKLLLPRCSPG*HHSGHC
Trigger: ACAATGCCCCGAGTGGTGGCAGCCAGGAGAGCAGCG...CGGCAAGAGGAGCTTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTGCTGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GTACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTTTTTCTGGGCTGTTCTaGGCTGCTCTCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLVGTLVHHVPQGEQLFLFSGLF*AALLAA
Trigger: GGCAGCCAGGAGAGCAGCGCAGAACAGCCCAGAAAA...AAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp TACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGCATGTCCTCCTGGCTTaGTCTCCTGCAGACAACCCC +
Preference number: 4 (lower is better)
Translates to: YSSAPSSTTCRRVSSSSLHVLLA*SPADNP
Trigger: GGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATG...CAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGCTCTGGGCAGCGCTGTaGCTGGCCAGGGAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGLWAAL*LAREVW
Trigger: CCACACCTCCCTGGCCAGGCACAGCGCTGCCCAGAG...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTaGTGGCGGCCCACCAATCGC +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPVKPAG*WRPTNR
Trigger: GCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTCAC...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGCAGGCCAGGAGCCCGTaGCACCATCCCAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVQARSP*HHPSLS
Trigger: GGACAGGCTGGGATGGTGGCACGGGCTCCTGGCCTG...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCAGCAGCTGCAGCACCTaGGACACCATGCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPSSCST*DTMPAA
Trigger: CGCAGCCGGCATGGTGTCCCAGGTGCTGCAGCTGCT...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATGCAGCTCTTCCTTGTTaGACAGCACTGCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHAALPC*TALRPA
Trigger: GGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGC...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp TTGCCACCTGTCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCATTGCCGCCACTGTGCTaGCGGGCATTGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: LPPVVGAPPPSTSSMLPPLPPLC*RALQSF
Trigger: GAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAA...TGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCTGCCCGAGAGCCTCTaGGCCAGCTCGTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKLPESL*ASSCTE
Trigger: CTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAG...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGAGCTCAGGGTGGAGCTaGTGGAGGAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASSCTEVDVWRNVWRLSKSSGWS*WRSPGW
Trigger: CCAGCCTGGGCTCCTCCACCAGCTCCACCCTGAGCT...CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCCTGCCTGGCTGGCAGCCCTaGCTGAGGGGCCCATCACGA +
Preference number: 4 (lower is better)
Translates to: GHSSAEPLYPVTPFSACLPGWQP*LRGPSR
Trigger: TCGTGATGGGCCCCTCAGCCAGGGCTGCCAGCCAGG...CAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCAGGAGGAGTCCCTCATaGATCGCGGTATTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLARRSPS*IAVLVG
Trigger: ACCAACCAATACCGCGATCCATGAGGGACTCCTCCT...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCATGGCTGCAATCCTGTaGCTCCTTGTAGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPMAAIL*LLVGRP
Trigger: CGGCCGCCCTACAAGGAGCCACAGGATTGCAGCCAT...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATAGAGGGCCAGCACAGTaGCCTCTGAGGACAGGACGG +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHRGPAQ*PLRTGR
Trigger: CCGTCCTGTCCTCAGAGGCCACTGTGCTGGCCCTCT...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGAGCTACCTCACTATCTaGGGAGTCCACTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLSYLTI*GVHFLV
Trigger: CACCAGGAAGTGGACTCCTCAGATAGTGAGGTAGCT...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCTGAGCCATTCAGTTaGCTGGATGCCGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLAEPFS*LDAVIL
Trigger: CAAGATGACGGCATCCAGTCAACTGAATGGCTCAGC...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGTTGTTCCTTCACTGCACTaGAGCAGACTGCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LVGTLVHHVPQGEQLFLVVPSLH*SRLRGA
Trigger: TGCTCCACGCAGTCTGCTTCAGTGCAGTGAAGGAAC...AACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGGAAAGAATCCAGGCTaGTGGCCATATTGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLGKNPG*WPYCER
Trigger: CCGCTCACAATATGGCCATCAGCCTGGATTCTTTCC...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCCCACGTGCCGCAGGGTaGGCAGCTCTTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPPRAAG*AALPCW
Trigger: CCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGG...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGGCCCATCACGATGTTaGCGCTGCTGGATGACTGGG +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHGPSRC*RCWMTG
Trigger: CCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCC...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGGCTGGCAGCCCTGGCTaGGGGGCCCATCACGATGTT +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVAGSPG*GAHHDV
Trigger: AACATCGTGATGGGCCCCTCAGCCAGGGCTGCCAGC...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGAAGGCAGCCAGTCCATaGCAACCCCTGGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRKAASP*QPLASE
Trigger: CTCAGAAGCCAGGGGTTGTCATGGACTGGCTGCCTT...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CAGGGGCTCTGCACGTGGGCCTTTCTGGATGACTGCGCTGGAAAGAGCGGCCCTAACCTCTGTATCCGGTaGCTCCTTTCAGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QGLCTWAFLDDCAGKSGPNLCIR*LLSVPA
Trigger: GGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTT...AGGGCCGCTCTTTCCAGCGCAGTCATCCAGAAAGGCCCACGTGCAGAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp GCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCTTGGCTTCCCCTGGCAGCGCTGCCATATCCTTaGGGTCAGGTTCTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: AILWLLVGRPAQPWLPLAALPYP*GQVLKS
Trigger: TGACTTTAGAACCTGACCTCAAGGATATGGCAGCGC...TGCCAGGGGAAGCCAAGGCTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp CGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAGCAGAACCACGGCAGGCTGAGTGCATaGGGGGCCGGTGCTAGTATG +
Preference number: 4 (lower is better)
Translates to: RSGPHCKQPRLSQTQQNHGRLSA*GAGASM
Trigger: CATACTAGCACCGGCCCCGCATGCACTCAGCCTGCC...GTGGTTCTGCTGTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGTACAGATGGGTCACTaGTCTGACGGCTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLVQMGH*SDGSDG
Trigger: ACCATCTGAGCCGTCAGAGCAGTGACCCATCTGTAC...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGTATTGTTCTGGATACTaGCGCGCTCCGGATTGCGGT +
Preference number: 4 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLYCSGY*RAPDCG
Trigger: ACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATA...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTTTTCTGGGCTGTTCTaGGCTGCTCTCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLFSGLF*AALLAA
Trigger: GGCAGCCAGGAGAGCAGCGCAGAACAGCCCAGAAAA...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGAGCGCTGAGTGTGCCTaGACGGACTGGCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKSAECA*TDWLLP
Trigger: AGGCAGGAGCCAGTCCGTGCAGGCACACTCAGCGCT...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATGGGTGTCACTGGTATTaGCCCCCTCCGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHGCHWY*PPPQQR
Trigger: TCTCTGCTGCGGAGGGGGGCAATACCAGTGACACCC...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp CCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTGCTGGCGGGCATTGCACCTGGCTTGCTCTCCTaGAGACAACCCCGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: PSSVHVFNVAATVLAGIAPGLLS*RQPREC
Trigger: ACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGG...TGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCTCTGACACACTTTGCTaGGAGGCCGTGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPSDTLC*EAVSSR
Trigger: CCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGA...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCGGACTTACAAGACGATaGGTCAAGGTTAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLAGLTRR*VKVSLA
Trigger: GGCCAGACTAACCTTGACCCATCGTCTTGTAAGTCC...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GGACAGCACTGCGCCCCGCCAGGCCGGGTCGCCCTCGTGGCAGATGACCACCTTGGACATCCTGATAGCTaGAGCTACAACTTTATGCAG +
Preference number: 4 (lower is better)
Translates to: GQHCAPPGRVALVADDHLGHPDS*SYNFMQ
Trigger: CTGCATAAAGTTGTAGCTCCAGCTATCAGGATGTCC...AAGGTGGTCATCTGCCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGGCAGCTCTTCCTTGTTaGACAGCACTGCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKAALPC*TALRPA
Trigger: GGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGC...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp AAGGTGGCACCCATGGCTGCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGACCTGCTTATTGTTCTaGATACTGCCGCGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: KVAPMAAILWLLVGRPAQTCLLF*ILPRSG
Trigger: TCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGT...CTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGCAGCCATGGGTGCCACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCTTGCCGCCACTGTGCTaGCGGGCATTGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPLPPLC*RALQSF
Trigger: GAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAA...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGACTGAGGTGGACGTCTaGAGGAATGTTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: YSSAPSSTTCRRVSSSSLTEVDV*RNVWRL
Trigger: GAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGT...CAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp TTCCGCAGGACCTGCTTATTGTTCTGGATACTGCCGCGCTCCGGATTGCGGTTGCTGCCCGAGAGCCTCTaGGCCAGCTCGTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: FRRTCLLFWILPRSGLRLLPESL*ASSCTE
Trigger: CTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAG...CAACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGTCACGGACACTCAGGTaGCCGGTGGTGGTGACGGGC +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGSRTLR*PVVVTG
Trigger: GCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGA...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp ACGAGCGCGCTGGAAAAGCTCCTCTTGCCGAAGAGGAAGCTCAGGGTGGAGCTGATCAGGGGGCTCACATaGCTCGGAGAGGTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: TSALEKLLLPKRKLRVELIRGLT*LGEVPS
Trigger: ACTCGGCACCTCTCCGAGCCATGTGAGCCCCCTGAT...CAGCTCCACCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAGCGCGCTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGCTGCCCCTGCTCGGTaGCATCAGGGGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPAAPAR*HQGAHM
Trigger: CATGTGAGCCCCCTGATGCCACCGAGCAGGGGCAGC...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGAGCCTTGGCTTCCCCTaGCAGGAAGGTACTTCCCTG +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRSLGFP*QEGTSL
Trigger: CAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCT...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGGAAAGGTGGCACCCATaGCTGCAATCCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRERWHP*LQSCGS
Trigger: GGAGCCACAGGATTGCAGCCATGGGTGCCACCTTTC...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR CAA 72 bp TGGCTGGCAGCCCTGGCTGAGGGGCCCATCACGATGTaGACGCTGCTGGATGACTGGGTGTCACTGGTATTG +
Preference number: 4 (lower is better)
Translates to: WLAALAEGPITM*TLLDDWVSLVL
Trigger: CAATACCAGTGACACCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCCCCTCAGCCAGGGCTGCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTTCCCACTGTCCACACTaGGCACCCGGGCATGCCTCT +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCSHCPH*APGHAS
Trigger: AGAGGCATGCCCGGGTGCTCAGTGTGGACAGTGGGA...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGACTGGCAGCTGGCCATaGCGAGGCAGAAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKTGSWP*RGRRGA
Trigger: TGCTCCTCTTCTGCCTCGTCATGGCCAGCTGCCAGT...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GGTGGAGCTGGTGGAGGAGCCCAGGCTGGACCTGATGAGCGCCTCGGCCCGCTCCACTGGCCTGACATATaGTGTGATGAAAATGACACT +
Preference number: 4 (lower is better)
Translates to: GGAGGGAQAGPDERLGPLHWPDI*CDENDT
Trigger: AGTGTCATTTTCATCACATCATATGTCAGGCCAGTG...GAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGTGAACTGGTCCTGGTaGAGTTTCAGGGACATCCTG +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSVNWSW*SFRDIL
Trigger: CAGGATGTCCCTGAAACTTCACCAGGACCAGTTCAC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp GTACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTACTCGTCAGGGCAAGTaGACTGGTCCTGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: VLVGTLVHHVPQGEQLFLTRQGK*TGPGEV
Trigger: AACTTCACCAGGACCAGTTCACTTGCCCTGACGAGT...AAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGATGTCCCTTCACAGGATaGCACCCCGTGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: RWHQGAHMARRGASKEKRCPFTG*HPVLST
Trigger: GGTGCTCAGCACGGGGTGTCATCCTGTGAAGGGACA...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGGGCCAGCTCGTGCACTaGGGTGGACGTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGGQLVH*GGRLEE
Trigger: TTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCC...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGGTTGACGCTGCTGGATaGCTGGGTGTCACTGGTATT +
Preference number: 4 (lower is better)
Translates to: YSSAPSSTTCRRVSSSSLVDAAG*LGVTGI
Trigger: AATACCAGTGACACCCAGTCATCCAGCAGCGTCAAC...CAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGCCAGACATCGGTCATaGAGCTGCCCCTGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGARHRS*SCPCSV
Trigger: CACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp GCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTGCTGGCGGGCATTGATTGGTTGGTTGTGGTaGTTTGGGGAGCACGAGGGA +
Preference number: 4 (lower is better)
Translates to: APPPSTSSMLPPLCWRALIGWLW*FGEHEG
Trigger: TCCCTCGTGCTCCCCAAATCACCACAACCAACCAAT...CAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGGAGAGCTGTTTCCCATaGAGGAGAGGGAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRESCFP*RRGRVT
Trigger: TGTCACCCTCCCTCTCCTTCATGGGAAACAGCTCTC...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGGGCAGGCTGAGTGCATaGGGGGCCGGTGCTAGTATG +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVGRLSA*GAGASM
Trigger: CATACTAGCACCGGCCCCGCATGCACTCAGCCTGCC...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGTGTGCTGGCGGGCATTaGAATCCTTCCGCATCCTTA +
Preference number: 4 (lower is better)
Translates to: PESVRHSLSQTSVMKLPLCAGGH*NPSASL
Trigger: TAAGGATGCGGAAGGATTGCAATGCCCGCCAGCACA...CAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCTGTGCTGGCGGGCATTaGAATCCTTCCGCATCCTTA +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSCAGGH*NPSASL
Trigger: TAAGGATGCGGAAGGATTGCAATGCCCGCCAGCACA...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCACTCGGGGCATTGTTaGCACCTGTCGTCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTHSGHC*HLSSGP
Trigger: GGGCCCCGACGACAGGTGGCAACAATGCCCCGAGTG...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTCGCTGCTCTCCTGGCTaGCACCACTCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCRCSPG*HHSGHC
Trigger: ACAATGCCCCGAGTGGTGGCAGCCAGGAGAGCAGCG...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TTGCCACCTGTCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCATGGAAAAGCTCCTCTTaGCGAAGAGGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPPVVGAPPPSTSSMLPPWKSSS*RRGSSG
Trigger: CCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCA...TGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGCACGAGGGAGAGCAATaGAGGTGGGAGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGHEGEQ*RWEVWG
Trigger: CCCCCACACCTCCCACCTGCATTGCTCTCCCTCGTG...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATGCCTTTCTGGATGACTaGGCTGGAAAGAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHAFLDD*AGKSGP
Trigger: AGGGCCGCTCTTTCCAGCGCAGTCATCCAGAAAGGC...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGAGACACAGGGGCTCTaGACGTGGGCCTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHETQGL*TWAFLD
Trigger: ATCCAGAAAGGCCCACGTGCAGAGCCCCTGTGTCTC...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTAGCGGAGGGGAGGCGTaGAGAGGTTTCGACTGGCCT +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGSGGEA*RGFDWP
Trigger: AGGCCAGTCGAAACCTCTCCACGCCTCCCCTCCGCT...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGGAGGAGTCCACTTCCTaGTGCAAGGGCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGEESTS*CKGRSP
Trigger: GGGGGACCTGCCCTTGCACCAGGAAGTGGACTCCTC...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAGAACCGGCCGCCCCTaGGTTAGTGGGCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESRTGRP*VSGLSV
Trigger: GACGCTGAGCCCACTAACCCAGGGGCGGCCGGTTCT...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTCGTGGGGTTTCCGACTaGGTCCTGCGAGCCACCATC +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCRGVSD*VLRATI
Trigger: GATGGTGGCTCGCAGGACCCAGTCGGAAACCCCACG...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCCCACAGAGGGACTCCTaGAGGGTCCTTGTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPPQRDS*RVLVKC
Trigger: ACACTTGACAAGGACCCTCCAGGAGTCCCTCTGTGG...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CAGATGAGCTCAGCATGGGCGGCCTTTGGCTTAGCGCTGAGTGTGCCTGCACGGCCACAGAGGGACTCCTaGAGGGTCCTTGTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: QMSSAWAAFGLALSVPARPQRDS*RVLVKC
Trigger: ACACTTGACAAGGACCCTCCAGGAGTCCCTCTGTGG...CCGTGCAGGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp CCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTGCTGGCGGGCATTGCATCTCGAAGGACTGGATaGCCTCGTAGAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: PSSVHVFNVAATVLAGIASRRTG*PRRGLL
Trigger: CAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGA...TGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTCTGCGCTGCTCTCCTaGCTGCCACCACTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESSALLS*LPPLGA
Trigger: TGCCCCGAGTGGTGGCAGCCAGGAGAGCAGCGCAGA...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCACGCTGCTGGATGACTaGGTGTCACTGGTATTGCCC +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLTLLDD*VSLVLP
Trigger: GGGCAATACCAGTGACACCCAGTCATCCAGCAGCGT...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCTTGGTTGTGGTGATTTaGGGAGCACGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSLVVVI*GARGRA
Trigger: TGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCCCTTCCATGAAAGGTaGCACCCATGGCTGCAATCC +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLPFHER*HPWLQS
Trigger: GGATTGCAGCCATGGGTGCCACCTTTCATGGAAGGG...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCAGCCCCGGGGACAACTaGCAGGTTCTGGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPSPGDN*QVLESG
Trigger: TCCTGATTCCAGAACCTGTCAGTTGTCCCCGGGGCT...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGACGAACTGTAACTTGTaGAGCAGGTCCCCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLTNCNL*SRSPSL
Trigger: CAAGCTCGGGGACCTGCTTCACAAGTTACAGTTCGT...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp GCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCTGGAGAAGTGATTCATTTTTaGTCCAGGAGAGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: AGCPRASGPARALRWTSGEVIHF*SRRGVW
Trigger: CCAAACTCCTCTCCTGGATCAAAAATGAATCACTTC...TCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGAAGCACGCGTCCCTGTaGAGCCCGCAGGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLKHASL*SPQGAG
Trigger: GCCAGCACCCTGCGGGCTTCACAGGGACGCGTGCTT...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCTTCAGGAAATGGTGGTaGGTAGTCAACGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSFRKWW*VVNVST
Trigger: GGTGGAGACGTTGACTACTCACCACCATTTCCTGAA...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCCAGCACAGTGGCCTCTaGGGACAGGACGGGCAACTG +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESQHSGL*GQDGQL
Trigger: CAGTTGCCCGTCCTGTCCTCAGAGGCCACTGTGCTG...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCCACGGTTCCTTCACTaGACTGAAGCAGACTGCGTG +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHPRFLH*TEADCV
Trigger: CACGCAGTCTGCTTCAGTGCAGTGAAGGAACCGTGG...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCGAAGGCCGAAAACAGTaGCGGGATGTGTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLEGRKQ*RDVLHA
Trigger: AGCATGCAACACATCCCGGCACTGTTTTCGGCCTTC...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp AGCTCTCCTCCCCAGGGTGCACAGGGCGAAGGACAGAGTCACCAAGGGAGAGTCGTACAGATGGGTCACTaGTCTGACGGCTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: SSPPQGAQGEGQSHQGRVVQMGH*SDGSDG
Trigger: ACCATCTGAGCCGTCAGAGCAGTGACCCATCTGTAC...GACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGCTTGTTGGACAGCACTaGGCCCCGCCAGGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLLVGQH*APPGRV
Trigger: GACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAG...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTCTTGTTGGACAGCACTaGGCCCCGCCAGGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: NSSANVHYPLLTGITPIRLVGQH*APPGRV
Trigger: GACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAG...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCTGCCTTTCCTCCTaGCTGTTCTCTGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLSCLSS*LFSVSL
Trigger: AAGGGACACAGAGAACAGGCAGGAGGAAAGGCAGGA...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGGGGTGTCACTGGTATTaGCCCCCTCCGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGGCHWY*PPPQQR
Trigger: TCTCTGCTGCGGAGGGGGGCAATACCAGTGACACCC...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCACGAGGGAGAGCAATaGAGGTGGGAGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTHEGEQ*RWEVWG
Trigger: CCCCCACACCTCCCACCTGCATTGCTCTCCCTCGTG...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCTACTGGAGACATGACTaGATGCATGATCACGGTTCT +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLAYWRHD*MHDHGS
Trigger: AGAACCGTGATCATGCATGCAGTCATGTCTCCAGTA...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCCCACTGCAACTCTGGTaGTTGATGGAAAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSPLQLW*LMESMS
Trigger: GCTCATGCTTTCCATCAAGCACCAGAGTTGCAGTGG...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCCCTCCAGGATGTACTaGGTCTGCGTGATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHPSRMY*VCVISQ
Trigger: CTGGGAAATCACGCAGACCCAGTACATCCTGGAGGG...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCCAATGTAATGCCACTTaGCAAAGGGCTGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSQCNAT*QRAAGT
Trigger: AGTCCCTGCAGCCCTTTGCCAAGTGGCATTACATTG...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGAGAGTGCAGGGACGTaGCCGAGGCGTGCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRESAGT*PRRARR
Trigger: TCTCCTTGCACGCCTCGGCCACGTCCCTGCACTCTC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTATCAGGGGGCTCACATaGCTCGGAGAGGTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPIRGLT*LGEVPS
Trigger: ACTCGGCACCTCTCCGAGCCATGTGAGCCCCCTGAT...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp AGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGGCTGCCCCTGCTCGGTaGCATCAGGGGGCTCACATG +
Preference number: 4 (lower is better)
Translates to: RWPQFCRTSVSGDSFQCLAAPAR*HQGAHM
Trigger: CATGTGAGCCCCCTGATGCCACCGAGCAGGGGCAGC...CAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGTTGGTTGTGGTGATTTaGGGAGCACGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRLVVVI*GARGRA
Trigger: TGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCAGGAGGAGTCCCTCATaGATCGCGGTATTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPRRSPS*IAVLVG
Trigger: ACCAACCAATACCGCGATCCATGAGGGACTCCTCCT...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTAGCCCCTTACCCGAGTaGCCTGGCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: NSSANVHYPLLTGITPIRSPLPE*PGWQPW
Trigger: CCAGGGCTGCCAGCCAGGCCACTCGGGTAAGGGGCT...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTGTCCTTTGTCACTCTaGGAGCCCCATAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLCPLSL*EPHREG
Trigger: CCCTTCTCTATGGGGCTCCCAGAGTGACAAAGGACA...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTTGGAAAGAGCGGCCCTaGGGGGAAGGGGCATTTGTG +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGWKERP*GEGAFV
Trigger: CACAAATGCCCCTTCCCCCCAGGGCCGCTCTTTCCA...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATGCACGTGGGCCTTTCTaGATGACTGCGCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHARGPF*MTALER
Trigger: TCTTTCCAGCGCAGTCATCCAGAAAGGCCCACGTGC...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATCTACCCACTTCTAACTaGCATCACCCCCATCCGTGC +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHLPTSN*HHPHPC
Trigger: GCACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAG...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTAGTAACAGCTGTTGCTaGAGGGCACTGACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPSNSCC*RALTAG
Trigger: CCCTGCCGTCAGTGCCCTTCAGCAACAGCTGTTACT...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCGGCATTGAGGTCATCTaGAGCCAAAATAAAGCAATC +
Preference number: 4 (lower is better)
Translates to: NMCGAVRGVPLWAALCLAGIEVI*SQNKAI
Trigger: GATTGCTTTATTTTGGCTTCAGATGACCTCAATGCC...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACCTCGTCGCCCTCCATaGTGGCTTCTACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRPRRPP*WLLPPS
Trigger: AGAGGGAGGTAGAAGCCATCATGGAGGGCGACGAGG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000344698.6
CDS-3UTR TCA 90 bp GTGCACAGGGCGAAGGACAGAGTCACCAAGGGAGAGTCCTCGTCACTGTCCAGGGGAAAGAATCCAGGCTaGTGGCCATATTGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: VHRAKDRVTKGESSSLSRGKNPG*WPYCER
Trigger: CCGCTCACAATATGGCCATCAGCCTGGATTCTTTCC...CCTGGACAGTGACGAGGACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTGTCCCTTCACAGGATaGCACCCCGTGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESCPFTG*HPVLST
Trigger: GGTGCTCAGCACGGGGTGTCATCCTGTGAAGGGACA...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGCAGAGAGTCCGGAAATaGCGAGCGCGCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGQRVRK*RARWKS
Trigger: GCTTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTG...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACCGTCACTGCTCGTCTaGCACACTTTGCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRPSLLV*HTLLRG
Trigger: GCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp AAGGTGGCACCCATGGCTGCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGGCAGGAAGGAGAATTTaGCAGAATCCCAGAACTACA +
Preference number: 4 (lower is better)
Translates to: KVAPMAAILWLLVGRPAQAGRRI*QNPRTT
Trigger: TGTAGTTCTGGGATTCTGTCAAATTCTCCTTCCTGC...CTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGCAGCCATGGGTGCCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGGACACCATGCCGGCTaGGCCCCGGGGCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTGHHAG*APGLVS
Trigger: GCTCACCAGCCCCGGGGCGCAGCCGGCATGGTGTCC...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACTTTCCGACTGGGTCCTaGGAGCCACCATCAGTAACA +
Preference number: 4 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHFPTGS*EPPSVT
Trigger: TGTTACTGATGGTGGCTCGCAGGACCCAGTCGGAAA...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGGAGCTACAACTTTATaGAGTAGGTCCATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLGATTL*SRSMSA
Trigger: TGCTGACATGGACCTACTGCATAAAGTTGTAGCTCC...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGCCCTCGTCCACCACGTaGCGCAGGGTGAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLPSSTT*RRVSSS
Trigger: AGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGG...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTTTTTCTGGGCTGTTCTaGGCTGCTCTCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCFSGLF*AALLAA
Trigger: GGCAGCCAGGAGAGCAGCGCAGAACAGCCCAGAAAA...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TCCGCAGCAGAGAGTCCGGAAATGACGAGCGCGCTGGAAAAGCTCCTCTTGCCGTCCTGCCTTTCCTCCTaGCTGTTCTCTGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SAAESPEMTSALEKLLLPSCLSS*LFSVSL
Trigger: AAGGGACACAGAGAACAGGCAGGAGGAAAGGCAGGA...CGGCAAGAGGAGCTTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTGCTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTCATGTCCTCCTGGCTTaGTCTCCTGCAGACAACCCC +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPHVLLA*SPADNP
Trigger: GGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATG...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGTCTGACACACTTTGCTaGGAGGCCGTGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGSDTLC*EAVSSR
Trigger: CCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGA...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCTGGAACATGTGTGGTaGTGTCCGCGGTGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTLEHVW*CPRCAA
Trigger: AGCGGCACACCGCGGACAGCACCACACATGTTCCAG...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTTGGAGAGGCTATaGCAGCCTACCTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLLLERL*QPTFVL
Trigger: AAGGACAAAGGTAGGCTGGCATAGCCTCTCCAAGAG...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGAAGGGGATGGGGTTCTaGAGGCAGAAGGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVKGMGF*RQKGGN
Trigger: GTTCCCACCCTTCTGCCTGCAGAACCCCATCCCCTT...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCAGATGGCCACAGTTCTaGAGAACCTCTGTATCCGGT +
Preference number: 4 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPRWPQF*RTSVSG
Trigger: ACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTCAGGCTTGGCCACGATaGTGTCACATTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCQAWPR*CHIEGS
Trigger: GCTGCCCTCAATGTGACACCATCGTGGCCAAGCCTG...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTACAGGATGTGTCTGCTaGCTCCTCCACAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCTGCVC*LLHRLG
Trigger: GCCAAGCCTGTGGAGGAGCCAGCAGACACATCCTGT...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGCTGACTCACATGCCGTaGGGTTTCCGACTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVLTHMP*GFRLGP
Trigger: AGGACCCAGTCGGAAACCCCACGGCATGTGAGTCAG...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCAACTGGGAGGGTGCCTaGCTTTGGCCCCTGTATCAA +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPNWEGA*LWPLYQ
Trigger: TTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTT...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACGGACATGAGTACAGATaGGTCACTGCTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHGHEYR*VTALTA
Trigger: AGCCGTCAGAGCAGTGACCCATCTGTACTCATGTCC...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCCTGCCAGTCTTGTGTTaGAATTATCCACTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSLPVLC*NYPLAL
Trigger: CAAGGCGAGTGGATAATTCCAACACAAGACTGGCAG...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTACACCTGCAGCATGGTaGCCGCGTTGTTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPTPAAW*PRCCPG
Trigger: TCCTGGACAACAACGCGGCCACCATGCTGCAGGTGT...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTGCTGGCGGGCATTGCACAATGTAATGCCACTTaGCAAAGGGCTGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: PSSVHVFNVAATVLAGIAQCNAT*QRAAGT
Trigger: AGTCCCTGCAGCCCTTTGCCAAGTGGCATTACATTG...TGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGCCTTTGAAGAGGACATaGAGGCCATACAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLPLKRT*RPYRKE
Trigger: TTCTTTCCTGTATGGCCTCCATGTCCTCTTCAAAGG...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTCTCGAAGGACTGGATaGCCTCGTAGAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPSRRTG*PRRGLL
Trigger: CAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGA...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCTCCCTAGGTAGGATGTaGTTAGTGGGGAGACATACA +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSSLGRM*LVGRHT
Trigger: TGTATGTCTCCCCACTAACCACATCCTACCTAGGGA...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCACTGAGGTGGACGTCTaGAGGAATGTTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPTEVDV*RNVWRL
Trigger: GAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGT...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACAAAGCCCGCAGGGTGCTaGCGGCCCACCAATCGCCTG +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTKPAGC*RPTNRL
Trigger: CAGGCGATTGGTGGGCCGCCAGCACCCTGCGGGCTT...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
3UTR CAA 72 bp CCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTaGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSWIAVLVGCGD*GSTRESNAGGR
Trigger: CCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGCGGCCGGGCAGGTaGGCGCCATGTCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLLRPGR*APCPRE
Trigger: CTCCCTCGGACATGGCGCTCACCTGCCCGGCCGCAG...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGTTGCTGAAGGGCACTaGCGGCAGGGTCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLVAEGH*RQGPQK
Trigger: CTTCTGGGGACCCTGCCGTCAGTGCCCTTCAGCAAC...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGGTTCCTTCACTGCACTaGAGCAGACTGCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGVPSLH*SRLRGA
Trigger: TGCTCCACGCAGTCTGCTTCAGTGCAGTGAAGGAAC...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR TCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCGGCGCTGACTGCAAATaGGAGGACAGCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESGADCK*EDSNHC
Trigger: GCAGTGGTTGCTGTCCTCTCATTTGCAGTCAGCGCC...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR TCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTTTGAGAATGGGGTGTaGAATCCACATCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLFENGV*NPHPGM
Trigger: CATCCCTGGATGTGGATTTCACACCCCATTCTCAAA...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGATTGCAGGACAGCAGGTaGGGCAAGTGGCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRLQDSR*GKWPGL
Trigger: CAAACCAGGCCACTTGCCTCACCTGCTGTCCTGCAA...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000344698.6
CDS-3UTR TCA 90 bp AGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCGCCCTCGTGGCAGATaGCCACCTTCTTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RWPQFCRTSVSGDSFQCLRPRGR*PPSSRR
Trigger: CCTTCGAGAAGAAGGTGGTCATCTGCCACGAGGGCG...CAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGATGACACCCCGTGCTaGGCACCGCCTTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLDDTPC*APPFLG
Trigger: GCCCAGAAAAGGCGGTGCTCAGCACGGGGTGTCATC...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGAGGAGCATTGTGTaGCTCCGCGGTGGATTTCCA +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGVRSIV*LRGGFP
Trigger: TGGAAATCCACCGCGGAGTCACACAATGCTCCTCAC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCCCCACTTTCAGAACTTaGGAACAGTGTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLPTFRT*EQCPQR
Trigger: CCTTTGTGGACACTGTTCTCAAGTTCTGAAAGTGGG...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGAGGCAGGCAGATCATTTaGAGTCAGGAGCTTGGTACC +
Preference number: 4 (lower is better)
Translates to: RWHQGAHMARRGASKEKRGRQII*SQELGT
Trigger: GGTACCAAGCTCCTGACTTCAAATGATCTGCCTGCC...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTTTGGTGAACTTGCTCTaGTCCGGGTCGTGGTACCAG +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPLVNLL*SGSWYQ
Trigger: CTGGTACCACGACCCGGAGCAGAGCAAGTTCACCAA...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACTGAGCACCCGGGCATaGCTCTTTTCATGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRLSTRA*LFSWLD
Trigger: GTCCAGCCATGAAAAGAGGCATGCCCGGGTGCTCAG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGTGCCGGGATGTGTTaGATGCTCCACGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGSAGMC*MLHGSF
Trigger: GAAGGAACCGTGGAGCATGCAACACATCCCGGCACT...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR GCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCGAAGGCCGAAAACAGTaGCGGGATGTGTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPEGRKQ*RDVLHA
Trigger: AGCATGCAACACATCCCGGCACTGTTTTCGGCCTTC...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTCCAGGGATGATGCTTaGGGAGCTGAGGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESSRDDA*GAEGAR
Trigger: ACGTGCTCCCTCAGCTCCGCAAGCATCATCCCTGGA...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR GCA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGAAGGATGTACTGGGTCTaGGTGATTTCCCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RWHQGAHMARRGASKEKRRMYWV*VISQVS
Trigger: GCTCACCTGGGAAATCACGCAGACCCAGTACATCCT...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCATGTTGCCGCCACTGTaGTGGCGGGCATTGCAATCC +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESMLPPL*WRALQS
Trigger: GGATTGCAATGCCCGCCAGCACAGTGGCGGCAACAT...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGCGCTGCTCTCCTGGCTaGCACCACTCGGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLRCSPG*HHSGHC
Trigger: ACAATGCCCCGAGTGGTGGCAGCCAGGAGAGCAGCG...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGAGCGCTGAGTGTGCCTaGACGGACTGGCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLSAECA*TDWLLP
Trigger: AGGCAGGAGCCAGTCCGTGCAGGCACACTCAGCGCT...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp CCAAACCTGACCCATTTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTGCAAGGAGAGCCGGCTaGCCGAGAGCCTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PNLTHFCLDTIDFPCLPGARRAG*PRASGP
Trigger: TGGCCCAGAGGCTCTCGGGCAGCCGGCTCTCCTTGC...ACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAAATGGGTCAGGTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGGTAAACACCCCTCAGTaGACAGCTTTTGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRVNTPQ*TAFVRQ
Trigger: CTGCCTTACAAAAGCTGTGCACTGAGGGGTGTTTAC...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGCTCTGTATCTTGTCTaGTTTCAAGAGCAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSALYLV*FQEQLS
Trigger: GCTTAGCTGCTCTTGAAAGCAGACAAGATACAGAGC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGGTGGCACCCATGGCTaGAATCCTGTGGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRGGTHG*NPVAPC
Trigger: ACAAGGAGCCACAGGATTGCAGCCATGGGTGCCACC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGGTCAGTGTCACTTCATaGACACTTAGCCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRVSVTS*TLSPCH
Trigger: ATGACAGGGGCTAAGTGTGCATGAAGTGACACTGAC...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTGCTGGCGGGCATTGCCTTTGAAGAGGACATaGAGGCCATACAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: APPPSTSSMLPPLCWRALPLKRT*RPYRKE
Trigger: TTCTTTCCTGTATGGCCTCCATGTCCTCTTCAAAGG...CAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GCTGAGGGGCCCATCACGATGTTGACGCTGCTGGATGACTGGGTGTCACTGGTAACCTGCTTATTGTTCTaGATACTGCCGCGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: AEGPITMLTLLDDWVSLVTCLLF*ILPRSG
Trigger: TCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGT...TACCAGTGACACCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCCCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGGTCTGGAGGAATGTTTaGCGGCTCTCTAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKVWRNV*RLSKMG
Trigger: CCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGAC...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGAGCTCGTGCACTGAGGTaGACGTCTGGAGGAATGTTT +
Preference number: 4 (lower is better)
Translates to: RWHQGAHMARRGASKEKRARALR*TSGGMF
Trigger: AAACATTCCTCCAGACGTCCACCTCAGTGCACGAGC...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGAGAGTGCAGGGACGTaGCCGAGGCGTGCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLESAGT*PRRARR
Trigger: TCTCCTTGCACGCCTCGGCCACGTCCCTGCACTCTC...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTACGCTGCTGGATGACTaGGTGTCACTGGTATTGCCC +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPTLLDD*VSLVLP
Trigger: GGGCAATACCAGTGACACCCAGTCATCCAGCAGCGT...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TTGAAGAGGACATGGAGGCCATACAGGAAAGAATCCAGGCTGATGGCCATATTGCCTGGCTGGCAGCCCTaGCTGAGGGGCCCATCACGA +
Preference number: 4 (lower is better)
Translates to: LKRTWRPYRKESRLMAILPGWQP*LRGPSR
Trigger: TCGTGATGGGCCCCTCAGCCAGGGCTGCCAGCCAGG...CAATATGGCCATCAGCCTGGATTCTTTCCTGTATGGCCTCCATGTCCTCTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp CAGATGAGCTCAGCATGGGCGGCCTTTGGCTTAGCGCTGAGTGTGCCTGCACGGCATGGATCGCGGTATTaGTTGGTTGTGGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: QMSSAWAAFGLALSVPARHGSRY*LVVVIW
Trigger: CCAAATCACCACAACCAACCAATACCGCGATCCATG...CCGTGCAGGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGTTGAAGTCAGGAGCTTaGTACCAGTCTGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLLKSGA*YQSGKQ
Trigger: CTGTTTGCCAGACTGGTACCAAGCTCCTGACTTCAA...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CAGGGGCTCTGCACGTGGGCCTTTCTGGATGACTGCGCTGGAAAGAGCGGCCCTACACAGATTGGGGCATaGAGAAGGGTGATACTTTGT +
Preference number: 4 (lower is better)
Translates to: QGLCTWAFLDDCAGKSGPTQIGA*RRVILC
Trigger: ACAAAGTATCACCCTTCTCCATGCCCCAATCTGTGT...AGGGCCGCTCTTTCCAGCGCAGTCATCCAGAAAGGCCCACGTGCAGAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGGAGGCCATTGTATTCTaGGGGCATGTGGTCCCTACG +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVEAIVF*GHVVPT
Trigger: CGTAGGGACCACATGCCCCCAGAATACAATGGCCTC...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR CAA 72 bp TCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTaGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: STGGVPHGSRYW*VVVIWGARGRA
Trigger: TGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
3UTR CAA 72 bp GAGGCCACAGAAGGCCGAAAACAGTGCCGGGATGTGTaGCATGCTCCACGGTTCCTTCACTGCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: EATEGRKQCRDV*HAPRFLHCTEA
Trigger: TGCTTCAGTGCAGTGAAGGAACCGTGGAGCATGCAACACATCCCGGCACTGTTTTCGGCCTTCTGTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTTTCTGGAATCAGGACTaGATTCTCACTCCCCCACGG +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGFWNQD*ILTPPR
Trigger: CCGTGGGGGAGTGAGAATTCAGTCCTGATTCCAGAA...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CACAACGTAACTGGGAGGGTGCCTGGCTTTGGCCCCTGTATCAAGAAGCAAAATGAGGCGGGGTCAGGCTaGACACTCTTTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HNVTGRVPGFGPCIKKQNEAGSG*TLFSRE
Trigger: CTCCCTGCTAAAGAGTGTTCAGCCTGACCCCGCCTC...ATTTTGCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTTACGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp GCTCCAGCCAAGGCAAACAGCACGATGCTGAGAAATGGTCGCAATGACAGGAATGTGTCCGTGTATTGGTaGGGCGGGGTCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: APAKANSTMLRNGRNDRNVSVYW*GGVRLN
Trigger: GTTCAGCCTGACCCCGCCTCACCAATACACGGACAC...ATTCCTGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTGCCTTGGCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGAGAGGGTCAGCAGCTaGCTCTGCCAGATTTTGATG +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGERVSS*LCQILM
Trigger: CATCAAAATCTGGCAGAGTCAGCTGCTGACCCTCTC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR TCA 90 bp ACGAGCGCGCTGGAAAAGCTCCTCTTGCCGAAGAGGAAGCTCAGGGTGGAGCTGCAAACAGCACGATGCTaGGAAATGGTCGCAATGACA +
Preference number: 4 (lower is better)
Translates to: TSALEKLLLPKRKLRVELQTARC*EMVAMT
Trigger: TGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTG...CAGCTCCACCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAGCGCGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACTTTGAGAATGGGGTGTaGAATCCACATCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHFENGV*NPHPGM
Trigger: CATCCCTGGATGTGGATTTCACACCCCATTCTCAAA...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCGGCATTGAGGTCATCTaGAGCCAAAATAAAGCAATC +
Preference number: 4 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSGIEVI*SQNKAI
Trigger: GATTGCTTTATTTTGGCTTCAGATGACCTCAATGCC...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGTCCAGTCCTCGAAGTTaGAAGGTGACAAGACCATTT +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRSSPRS*KVTRPF
Trigger: AAATGGTCTTGTCACCTTTCAACTTCGAGGACTGGA...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGAACTGGTCCTGGTaGAGTTTCAGGGACATCCTG +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGVNWSW*SFRDIL
Trigger: CAGGATGTCCCTGAAACTTCACCAGGACCAGTTCAC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp GAACCAGGTCCTAATTCTGTCCAAAGTGATGGGTCCACCCCAGATGTTCTTCAGCCACGTGCCGCAGGGTaGGCAGCTCTTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EPGPNSVQSDGSTPDVLQPRAAG*AALPCW
Trigger: CCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGG...CTGAAGAACATCTGGGGTGGACCCATCACTTTGGACAGAATTAGGACCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACAGGCCAGCTCGTGCACTaGGGTGGACGTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTGQLVH*GGRLEE
Trigger: TTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCC...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGTTGACGCTGCTGGATaGCTGGGTGTCACTGGTATT +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCVDAAG*LGVTGI
Trigger: AATACCAGTGACACCCAGTCATCCAGCAGCGTCAAC...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGTCGCCTGGACTACAGTaGGGAGCATTGTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTSPGLQ*GALCDS
Trigger: GGAGTCACACAATGCTCCTCACTGTAGTCCAGGCGA...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCATAGAACCAGCTGCATaGGTGGAAAATGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPIEPAA*VENAKV
Trigger: CACCTTTGCATTTTCCACTCATGCAGCTGGTTCTAT...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTGTGGGCCTTTCTGGATaGCTGCGCTGGAAAGAGCGG +
Preference number: 4 (lower is better)
Translates to: NSSANVHYPLLTGITPIRVGLSG*LRWKER
Trigger: CCGCTCTTTCCAGCGCAGTCATCCAGAAAGGCCCAC...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAGCAGAACCACCCAGTACATTCTCCTTaGTGTCTTCAGTTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: RSGPHCKQPRLSQTQQNHPVHSP*CLQFRG
Trigger: CCCACGGAACTGAAGACATCAAGGAGAATGTACTGG...GTGGTTCTGCTGTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGAGTGATGAGAGGTTATaGTTTGCCCTCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKSDERL*FALWSC
Trigger: GCAGCTCCAGAGGGCAAAGCATAACCTCTCATCACT...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TCCGCAGCAGAGAGTCCGGAAATGACGAGCGCGCTGGAAAAGCTCCTCTTGCCGACTGGTAAACCGGGTTaGAGAATGATGTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: SAAESPEMTSALEKLLLPTGKPG*RMMSAT
Trigger: TGTTGCGGACATCATTCTGCAACCCGGTTTACCAGT...CGGCAAGAGGAGCTTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTGCTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGCGCCAGAGCTGTAGTTaGCCCAACGTCCAAGAACTA +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGRQSCS*PNVQEL
Trigger: TAGTTCTTGGACGTTGGGGCAACTACAGCTCTGGCG...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTAGGATGTACTGGGTCTaGGTGATTTCCCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGRMYWV*VISQVS
Trigger: GCTCACCTGGGAAATCACGCAGACCCAGTACATCCT...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000344698.6
CDS-3UTR GCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGGGAGCTACAACTTTATaGAGTAGGTCCATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLGATTL*SRSMSA
Trigger: TGCTGACATGGACCTACTGCATAAAGTTGTAGCTCC...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp GGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCCTGTATTGTTCTGGATACTaGCGCGCTCCGGATTGCGGT +
Preference number: 4 (lower is better)
Translates to: GHSSAEPLYPVTPFSACLYCSGY*RAPDCG
Trigger: ACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATA...CAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTTGTGCTGGCGGGCATTaGAATCCTTCCGCATCCTTA +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCCAGGH*NPSASL
Trigger: TAAGGATGCGGAAGGATTGCAATGCCCGCCAGCACA...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTGCACGGACTGGCTCCTaGCTTTCCTCCTGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: NSSANVHYPLLTGITPIRARTGS*LSSCLF
Trigger: GAACAGGCAGGAGGAAAGGCAGGAGCCAGTCCGTGC...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GGCCCAAAGTCCTCGGACGCATTCTTTGTTAACCTTGATCACCTTGAAGCTCAGAGCGCTGAGTGTGCCTaGACGGACTGGCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GPKSSDAFFVNLDHLEAQSAECA*TDWLLP
Trigger: AGGCAGGAGCCAGTCCGTGCAGGCACACTCAGCGCT...CTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GAACATTGCAAGGTCACGCTCAATGTAATGCCACTTGGCAAAGGGCTGCAGGGAGGGTGTCACTGGTATTaGCCCCCTCCGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: EHCKVTLNVMPLGKGLQGGCHWY*PPPQQR
Trigger: TCTCTGCTGCGGAGGGGGGCAATACCAGTGACACCC...TCCCTGCAGCCCTTTGCCAAGTGGCATTACATTGAGCGTGACCTTGCAATGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATAACGTCTCCACCACCTaGTTTCAAGAGTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHNVSTT*FQEWGI
Trigger: TATACCCCACTCTTGAAAGCAGGTGGTGGAGACGTT...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGGGAAGGGGCATTTGTaGGCCTGGCTTTCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRGKGHL*AWLSSC
Trigger: ACAGCTAGAAAGCCAGGCGCACAAATGCCCCTTCCC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TTCCGCAGGACCTGCTTATTGTTCTGGATACTGCCGCGCTCCGGATTGCGGTTGGGACATGAGTACAGATaGGTCACTGCTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: FRRTCLLFWILPRSGLRLGHEYR*VTALTA
Trigger: AGCCGTCAGAGCAGTGACCCATCTGTACTCATGTCC...CAACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GGAAAGCCCATAAATCTCCCCTTCCATGAAAGGTGGCACCCATGGCTGCAATCCACACCTGCAGCATGGTaGCCGCGTTGTTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GKPINLPFHERWHPWLQSTPAAW*PRCCPG
Trigger: TCCTGGACAACAACGCGGCCACCATGCTGCAGGTGT...GGATTGCAGCCATGGGTGCCACCTTTCATGGAAGGGGAGATTTATGGGCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACAAACACCTGCAGCATaGTGGCCGCGTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRQTPAA*WPRCCP
Trigger: TGGACAACAACGCGGCCACCATGCTGCAGGTGTTTG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000344698.6
CDS-3UTR CCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGACCTGCTTATTGTTCTaGATACTGCCGCGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVTCLLF*ILPRSG
Trigger: TCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGT...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp CCAAACCTGACCCATTTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTCTGCCCGAGAGCCTCTaGGCCAGCTCGTGCACTGAG +
Preference number: 4 (lower is better)
Translates to: PNLTHFCLDTIDFPCLPGLPESL*ASSCTE
Trigger: CTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAG...ACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAAATGGGTCAGGTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTAGGTGCCGAGTGGCCTaGCTGGCAGCCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGRCRVA*LAALAE
Trigger: CTCAGCCAGGGCTGCCAGCCAGGCCACTCGGCACCT...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGTGCTGTGTGAATGGGTaGAGGGCATTCTCCGTCATG +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVCCVNG*RAFSVM
Trigger: CATGACGGAGAATGCCCTCCACCCATTCACACAGCA...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GGAAAGCCCATAAATCTCCCCTTCCATGAAAGGTGGCACCCATGGCTGCAATCCATCAGGGGGCTCACATaGCTCGGAGAGGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GKPINLPFHERWHPWLQSIRGLT*LGEVLP
Trigger: TGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGAT...GGATTGCAGCCATGGGTGCCACCTTTCATGGAAGGGGAGATTTATGGGCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CACAACGTAACTGGGAGGGTGCCTGGCTTTGGCCCCTGTATCAAGAAGCAAAATAGTAACAGCTGTTGCTaGAGGGCACTGACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HNVTGRVPGFGPCIKKQNSNSCC*RALTAG
Trigger: CCCTGCCGTCAGTGCCCTTCAGCAACAGCTGTTACT...ATTTTGCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTTACGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGAGAGGGTCAGCAGCTaGCTCTGCCAGATTTTGATG +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRERVSS*LCQILM
Trigger: CATCAAAATCTGGCAGAGTCAGCTGCTGACCCTCTC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR TCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAATACAGTGCTGGCGCTaGCTGCAAATGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRIQCWR*LQMRGQ
Trigger: CTGTCCTCTCATTTGCAGTCAGCGCCAGCACTGTAT...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR TCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGGAGAAATGGTCGCAATaGCAGGAATACAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGEKWSQ*QEYSAG
Trigger: GCCAGCACTGTATTCCTGTCATTGCGACCATTTCTC...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR TCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGCTTCATGCCAGCAATaGTCATCAGAAAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHASCQQ*SSEKCP
Trigger: GGGACATTTTTCTGATGATCATTGCTGGCATGAAGC...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCGAAGTGATTCATTTTTaGTCCAGGAGAGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLEVIHF*SRRGVW
Trigger: CCAAACTCCTCTCCTGGATCAAAAATGAATCACTTC...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGGTGAACTGGTCCTGGTaGAGTTTCAGGGACATCCTG +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTVNWSW*SFRDIL
Trigger: CAGGATGTCCCTGAAACTTCACCAGGACCAGTTCAC...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTCACATAGGAGCACTGGATGACACCCCGTGCTaGGCACCGCCTTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FCLDTIDFPCLPGHIGALDDTPC*APPFLG
Trigger: GCCCAGAAAAGGCGGTGCTCAGCACGGGGTGTCATC...CAGTGCTCCTATGTGACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAATTGGTTGGTTGTGGTaGTTTGGGGAGCACGAGGGA +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRIGWLW*FGEHEG
Trigger: TCCCTCGTGCTCCCCAAATCACCACAACCAACCAAT...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp GGCCAGAATCATGTGAGAAGAGTCCTGCTGTGTGAATGGGTGGAGGGCATTCTCACAACCCCTGGCTTCTaGGAGTTAGCCGACTCACTG +
Preference number: 4 (lower is better)
Translates to: GQNHVRRVLLCEWVEGILTTPGF*ELADSL
Trigger: CAGTGAGTCGGCTAACTCTCAGAAGCCAGGGGTTGT...GAGAATGCCCTCCACCCATTCACACAGCAGGACTCTTCTCACATGATTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCCCCTGTCATGAATGCTaGGTTCTAGCAGGCTTGACC +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESPCHEC*VLAGLT
Trigger: GGTCAAGCCTGCTAGAACTCAGCATTCATGACAGGG...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTTTTGCCCTCTGGAGCTaGAGCGGAGGGGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAFALWS*SGGEAW
Trigger: CCACGCCTCCCCTCCGCTGCAGCTCCAGAGGGCAAA...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCGCACCCACATATCTTTaGAAAAGCCTTGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPAPTYL*KSLGSR
Trigger: CCTTGAGCCAAGGCTTTTGCAAAGATATGTGGGTGC...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGCAGAAAGTGTTGATTTaGGGGAAGAGCCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGQKVLI*GKSPRR
Trigger: CCTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTG...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GCTCCAGCCAAGGCAAACAGCACGATGCTGAGAAATGGTCGCAATGACAGGAATTCCAGGGATGATGCTTaGGGAGCTGAGGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: APAKANSTMLRNGRNDRNSRDDA*GAEGAR
Trigger: ACGTGCTCCCTCAGCTCCGCAAGCATCATCCCTGGA...ATTCCTGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTGCCTTGGCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp GGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCCTGAGAAATATAAGCTCCTaGTGCTGCCCGGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GHSSAEPLYPVTPFSACLRNISS*CCPAQS
Trigger: ACTTTGGGCCGGGCAGCAGCAGGAGCTTATATTTCT...CAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATAAGTTCCGCAGGACCTaGTTATTGTTCTGGATACTG +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHKFRRT*LLFWIL
Trigger: CAGTATCCAGAACAATAAGCAGGTCCTGCGGAACTT...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTCCTGCCTTTCCTCCTaGCTGTTCTCTGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESSCLSS*LFSVSL
Trigger: AAGGGACACAGAGAACAGGCAGGAGGAAAGGCAGGA...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGTGGAAAAGCTCCTCTTaGCGAAGAGGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTWKSSS*RRGSSG
Trigger: CCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCA...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGCCTGGCTTGCTCTCCTaGAGACAACCCCGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLPGLLS*RQPREC
Trigger: ACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGG...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTCCTGGCTTGCTCTCCTaGAGACAACCCCGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: NSSANVHYPLLTGITPIRPGLLS*RQPREC
Trigger: ACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGG...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTCATGTCCTCCTGGCTTaGTCTCCTGCAGACAACCCC +
Preference number: 4 (lower is better)
Translates to: NSSANVHYPLLTGITPIRHVLLA*SPADNP
Trigger: GGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATG...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTTCGTCTGACACACTTTaGTGCGAGGCCGTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: NSSANVHYPLLTGITPIRSSDTL*CEAVSS
Trigger: GGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGA...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGGTGCTGTCCGCGGTGTaGCGCTCTGGGCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLVLSAV*RSGQRC
Trigger: ACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCAC...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTAAGTGCAGCGATCTaGTCTCTTGGAGAGGCTATG +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGVSAAI*SLGEAM
Trigger: CATAGCCTCTCCAAGAGAGCAGATCGCTGCACTTAC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTCCACCCTCGGATCTGTaGCGCAAAGGAGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAPPSDL*RKGGCP
Trigger: GGGGCAGCCTCCTTTGCGCCACAGATCCGAGGGTGG...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACATACACAACGTAACTaGGAGGGTGCCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRHTQRN*EGAWLW
Trigger: CCAAAGCCAGGCACCCTCCCAGTTACGTTGTGTATG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGAATCTTTCATCTTCTTaGGGAGAGGGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKNLSSS*GEGQQL
Trigger: CAGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATT...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTGCACAGGGCGAAGGACAGAGTCACCAAGGGAGAGTCCTCGTCACTGTCCAGGTGGCAGAATGAGGAATaGCAAAGAGCTGAGCAAACA +
Preference number: 4 (lower is better)
Translates to: VHRAKDRVTKGESSSLSRWQNEE*QRAEQT
Trigger: TGTTTGCTCAGCTCTTTGCCATTCCTCATTCTGCCA...CCTGGACAGTGACGAGGACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp GCTGAGGGGCCCATCACGATGTTGACGCTGCTGGATGACTGGGTGTCACTGGTACTGCCAGTCTTGTGTTaGAATTATCCACTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: AEGPITMLTLLDDWVSLVLPVLC*NYPLAL
Trigger: CAAGGCGAGTGGATAATTCCAACACAAGACTGGCAG...TACCAGTGACACCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCCCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCGGATCTCTTTCAATTTaGACTGCCAGTCTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLGSLSI*TASLVL
Trigger: CAACACAAGACTGGCAGTCCAAATTGAAAGAGATCC...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp TTGCCACCTGTCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCAGTTGTCATCATTCCCTaGATCTCTTTCAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: LPPVVGAPPPSTSSMLPPVVIIP*ISFNLD
Trigger: GTCCAAATTGAAAGAGATCCAGGGAATGATGACAAC...TGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp ACGAGCGCGCTGGAAAAGCTCCTCTTGCCGAAGAGGAAGCTCAGGGTGGAGCTGTCCAGGAGAGGAGTTTaGGAGACGTTACCATATAGT +
Preference number: 4 (lower is better)
Translates to: TSALEKLLLPKRKLRVELSRRGV*ETLPYS
Trigger: ACTATATGGTAACGTCTCCCAAACTCCTCTCCTGGA...CAGCTCCACCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAGCGCGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGCAATGTAATGCCACTTaGCAAAGGGCTGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVQCNAT*QRAAGT
Trigger: AGTCCCTGCAGCCCTTTGCCAAGTGGCATTACATTG...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATCCTTTGAAGAGGACATaGAGGCCATACAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHPLKRT*RPYRKE
Trigger: TTCTTTCCTGTATGGCCTCCATGTCCTCTTCAAAGG...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp TTGAAGAGGACATGGAGGCCATACAGGAAAGAATCCAGGCTGATGGCCATATTGGCAGCTCTTCCTTGTTaGACAGCACTGCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LKRTWRPYRKESRLMAILAALPC*TALRPA
Trigger: GGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGC...CAATATGGCCATCAGCCTGGATTCTTTCCTGTATGGCCTCCATGTCCTCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTCCCTAGGTAGGATGTaGTTAGTGGGGAGACATACA +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPSLGRM*LVGRHT
Trigger: TGTATGTCTCCCCACTAACCACATCCTACCTAGGGA...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGGCTCGTGCACTGAGGTaGACGTCTGGAGGAATGTTT +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTARALR*TSGGMF
Trigger: AAACATTCCTCCAGACGTCCACCTCAGTGCACGAGC...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTCGTGCACTGAGGTaGACGTCTGGAGGAATGTTT +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRARALR*TSGGMF
Trigger: AAACATTCCTCCAGACGTCCACCTCAGTGCACGAGC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp AAGAGAGAAACAGTGAACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCTCACGGACACTCAGGTaGCCGGTGGTGGTGACGGGC +
Preference number: 4 (lower is better)
Translates to: KRETVNSSANVHYPLLTGSRTLR*PVVVTG
Trigger: GCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGA...GCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTTCACTGTTTCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTTCTAGTAAGTCATACTaGGACAAAGACAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCSSKSY*DKDRWG
Trigger: GCCCCACCTGTCTTTGTCTCAGTATGACTTACTAGA...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAAGTGGGTCTCCGGGTTaGGAAGTATCGATGAGAGTA +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRSGSPG*EVSMRV
Trigger: TACTCTCATCGATACTTCTCAACCCGGAGACCCACT...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACATGGTACTGGAGGAGCTaGCCTGCATCTCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTWYWRS*PASLEP
Trigger: AGGCTCGAGAGATGCAGGTCAGCTCCTCCAGTACCA...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TTCCGCATCCTTACCCACTTGGTCCAGAACCAGGTCCTAATTCTGTCCAAAGTGGGCGCTGACTGCAAATaGGAGGACAGCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: FRILTHLVQNQVLILSKVGADCK*EDSNHC
Trigger: GCAGTGGTTGCTGTCCTCTCATTTGCAGTCAGCGCC...CACTTTGGACAGAATTAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTCAAACAGCACGATGCTaGGAAATGGTCGCAATGACA +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCQTARC*EMVAMT
Trigger: TGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTG...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR TCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCCAATTTCAATCAGGTaGACAAAGGCATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHPISIR*TKALRS
Trigger: TGACCTCAATGCCTTTGTTCACCTGATTGAAATTGG...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGCTCGAAGTTGAAAGGTaGCAAGACCATTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRLEVER*QDHFQF
Trigger: AAATTGGAAATGGTCTTGTCACCTTTCAACTTCGAG...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp GGAAAGCCCATAAATCTCCCCTTCCATGAAAGGTGGCACCCATGGCTGCAATCCACTCGTCAGGGCAAGTaGACTGGTCCTGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GKPINLPFHERWHPWLQSTRQGK*TGPGEV
Trigger: AACTTCACCAGGACCAGTTCACTTGCCCTGACGAGT...GGATTGCAGCCATGGGTGCCACCTTTCATGGAAGGGGAGATTTATGGGCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp AGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGAAATCTCCCCTTCCATaGAAGGTGGCACCCATGGCT +
Preference number: 4 (lower is better)
Translates to: RWPQFCRTSVSGDSFQCLKSPLP*KVAPMA
Trigger: AGCCATGGGTGCCACCTTTCATGGAAGGGGAGATTT...CAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCGGGCATGGAGAAGGGTaGTACTTTGTACATTTTTAT +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLGHGEG*YFVHFY
Trigger: ATAAAAATGTACAAAGTATCACCCTTCTCCATGCCC...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp AAGCCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGCAGGTCCCCGAGTTTaGAGGCTGAAGGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KPSAKEPHMSGRTVTCEAAGPRV*RLKGRG
Trigger: TCCTCTGCCCTTCAGCCTTCAAACTCGGGGACCTGC...TGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
CDS-3UTR GCA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGAGTCCACTTCCTGGTaGAAGGGCAGGTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CICPADGIRRAAVHFFFMESTSW*KGRSPW
Trigger: CCAGGGGGACCTGCCCTTGCACCAGGAAGTGGACTC...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGAGGACAGCAACCACTaGGCAGACGATGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLEDSNH*ADDEIP
Trigger: TGGGATCTCATCGTCTGCGCAGTGGTTGCTGTCCTC...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR GCA 90 bp TCCGCAGCAGAGAGTCCGGAAATGACGAGCGCGCTGGAAAAGCTCCTCTTGCCGCTCTTGTCTTTTCCGTaGACAGTGTTGAATCCATTC +
Preference number: 4 (lower is better)
Translates to: SAAESPEMTSALEKLLLPLLSFP*TVLNPF
Trigger: GAATGGATTCAACACTGTGCACGGAAAAGACAAGAG...CGGCAAGAGGAGCTTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTGCTGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGCTCTCCTCCCCAGGGTaGACAGGGCGAAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: CICPADGIRRAAVHFFFMLSSPG*TGRRTE
Trigger: CTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAG...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp AGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGTGGAAAAGCTCCTCTTaGCGAAGAGGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RWPQFCRTSVSGDSFQCLWKSSS*RRGSSG
Trigger: CCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCA...CAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTACTCCTTTCAGTGCCTaGCTGGGCATTATCGTTTAC +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGTPFSA*LGIIVY
Trigger: GTAAACGATAATGCCCAGGCAGGCACTGAAAGGAGT...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGCCTCTTTTCATGGCTaGACTTACAAGACGATGGGT +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGASFHG*TYKTMG
Trigger: ACCCATCGTCTTGTAAGTCCAGCCATGAAAAGAGGC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAATCTTTCATCTTCTTaGGGAGAGGGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGNLSSS*GEGQQL
Trigger: CAGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATT...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR CCA 90 bp ACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCTGAAAGAAAAGCATaGCAGAATGAGGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: THFAARPCRPGPCPPGLLSERKA*QNEEWQ
Trigger: TTGCCATTCCTCATTCTGCCATGCTTTTCTTTCAGA...GAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTCTGCCAGTCTTGTGTTaGAATTATCCACTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGLPVLC*NYPLAL
Trigger: CAAGGCGAGTGGATAATTCCAACACAAGACTGGCAG...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATGGATCTCTTTCAATTTaGACTGCCAGTCTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHGSLSI*TASLVL
Trigger: CAACACAAGACTGGCAGTCCAAATTGAAAGAGATCC...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGGTTGTCATCATTCCCTaGATCTCTTTCAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLVVIIP*ISFNLD
Trigger: GTCCAAATTGAAAGAGATCCAGGGAATGATGACAAC...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTCAAACACCTGCAGCATaGTGGCCGCGTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: NSSANVHYPLLTGITPIRQTPAA*WPRCCP
Trigger: TGGACAACAACGCGGCCACCATGCTGCAGGTGTTTG...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTCCAGGAGAGGAGTTTaGGAGACGTTACCATATAGT +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPSRRGV*ETLPYS
Trigger: ACTATATGGTAACGTCTCCCAAACTCCTCTCCTGGA...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGGGACATCCTGATAGCTaGAGCTACAACTTTATGCAG +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKGHPDS*SYNFMQ
Trigger: CTGCATAAAGTTGTAGCTCCAGCTATCAGGATGTCC...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGTCAGGGTGGAGCTGGTaGAGGAGCCCAGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLSGWSW*RSPGWT
Trigger: GGTCCAGCCTGGGCTCCTCCACCAGCTCCACCCTGA...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCCTGCTTTCAGTGCCTGCCTaGGCATTATCGTTTACAGGA +
Preference number: 4 (lower is better)
Translates to: GHSSAEPLYPVTPFSACLLSVPA*ALSFTG
Trigger: TCCTGTAAACGATAATGCCCAGGCAGGCACTGAAAG...CAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGATATTCTGGGGGCATGTaGTCCCTACGACAATTGTCC +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRYSGGM*SLRQLS
Trigger: GGACAATTGTCGTAGGGACCACATGCCCCCAGAATA...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
3UTR CAA 72 bp TCTAGCAGGCTTGACCCCAGTAGAACACAGAGGCCATaGTATTCTGGGGGCATGTGGTCCCTACGACAATTG +
Preference number: 4 (lower is better)
Translates to: SSRLDPSRTQRP*YSGGMWSLRQL
Trigger: CAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCTCTGTGTTCTACTGGGGTCAAGCCTGCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGGTGGCAGCTGTTGGTaGACTTGCTCTGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAGGSCW*TCSAPG
Trigger: ACCCGGAGCAGAGCAAGTTCACCAACAGCTGCCACC...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGTCCAGCATGTGTGCTTaGGACGCAGGTAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLSSMCA*DAGKLS
Trigger: GGAAAGCTTACCTGCGTCTCAAGCACACATGCTGGA...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTGATGAAGAACTGTaGTCCTTGATGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTRDEEL*SLMAFP
Trigger: GGGAAATGCCATCAAGGATCACAGTTCTTCATCACG...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GCTCCAGCCAAGGCAAACAGCACGATGCTGAGAAATGGTCGCAATGACAGGAATGCTGAGCCATTCAGTTaGCTGGATGCCGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: APAKANSTMLRNGRNDRNAEPFS*LDAVIL
Trigger: CAAGATGACGGCATCCAGTCAACTGAATGGCTCAGC...ATTCCTGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTGCCTTGGCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACGTGCTAGTATGGTCTTaGCTTTGCAAATCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHVLVWS*LCKSGF
Trigger: AAAACCAGATTTGCAAAGTCAAGACCATACTAGCAC...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGCTTTGTCTATTGCCCTaGAAAAAGGCTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVLCLLP*KKAVVL
Trigger: CAAGACCACAGCCTTTTTTCAGGGCAATAGACAAAG...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGAGGCGGGGTCAGGCTaGACACTCTTTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTEAGSG*TLFSRE
Trigger: CTCCCTGCTAAAGAGTGTTCAGCCTGACCCCGCCTC...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTGTGTCCGTGTATTGGTaGGGCGGGGTCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGVSVYW*GGVRLN
Trigger: GTTCAGCCTGACCCCGCCTCACCAATACACGGACAC...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCCAGTGGGTAGGCGCTGACTGCAAATaGGAGGACAGCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: VRNSFMPAMIIRKMSQWVGADCK*EDSNHC
Trigger: GCAGTGGTTGCTGTCCTCTCATTTGCAGTCAGCGCC...TACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
CDS-3UTR TCA 90 bp AGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGCCATCTGCCAAGGAGCCAAACCGGGTTGCAGAATaGTGTCCGCAACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RAEQTRETKNPKPSAKEPNRVAE*CPQQLH
Trigger: ATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTT...TGGCTCCTTGGCAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486012.5
ENST00000490102.6
CDS-3UTR TCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCTCGAAGTTGAAAGGTaGCAAGACCATTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHLEVER*QDHFQF
Trigger: AAATTGGAAATGGTCTTGTCACCTTTCAACTTCGAG...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGTCCAGTCCTCGAAGTTaGAAGGTGACAAGACCATTT +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVSSPRS*KVTRPF
Trigger: AAATGGTCTTGTCACCTTTCAACTTCGAGGACTGGA...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCAGTGAGCCAGCGGAGGTaGAAGGCAGCGTTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: THILTYPGFSQNTGDMTAVSQRR*KAALQD
Trigger: GTCCTGCAACGCTGCCTTTCACCTCCGCTGGCTCAC...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACACGCCCTCGTGGCAGATaGCCACCTTCTTCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTRPRGR*PPSSRR
Trigger: CCTTCGAGAAGAAGGTGGTCATCTGCCACGAGGGCG...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TACAGGATATCTGCTCTGTATCTTGTCTGCTTTCAAGAGCAGCTAAGCCACTTCCCACGTGCCGCAGGGTaGGCAGCTCTTCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: YRISALYLVCFQEQLSHFPRAAG*AALPCW
Trigger: CCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGG...GAAGTGGCTTAGCTGCTCTTGAAAGCAGACAAGATACAGAGCAGATATCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGGCCCATCACGATGTTaGCGCTGCTGGATGACTGGG +
Preference number: 4 (lower is better)
Translates to: CICPADGIRRAAVHFFFMGPSRC*RCWMTG
Trigger: CCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCC...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTGGCGCAAAGGAGGCTaGCCCTTGCCTCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGWRKGG*PLPPLS
Trigger: GGAAAGAGGAGGCAAGGGGCAGCCTCCTTTGCGCCA...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCACAGGAATTGAGATCTaGTCGGCATTTGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESTGIEI*SAFGEP
Trigger: CGGTTCTCCAAATGCCGAGCAGATCTCAATTCCTGT...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACATTCAGTTGACTGGATaGCGTCATCTTGGAAGTATT +
Preference number: 4 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHIQLTG*RHLGSI
Trigger: AATACTTCCAAGATGACGGCATCCAGTCAACTGAAT...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp GGCCCAAAGTCCTCGGACGCATTCTTTGTTAACCTTGATCACCTTGAAGCTCAGCCGGGATGTGTTGCATaGTCCACGGTTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: GPKSSDAFFVNLDHLEAQPGCVA*STVPSL
Trigger: CAGTGAAGGAACCGTGGAGCATGCAACACATCCCGG...CTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGTCTTTCAATTTGGACTaGCAGTCTTGTGTTGGAATT +
Preference number: 4 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLSFNLD*QSCVGI
Trigger: AATTCCAACACAAGACTGGCAGTCCAAATTGAAAGA...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAAGTTCCGCAGGACCTaGTTATTGTTCTGGATACTG +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGKFRRT*LLFWIL
Trigger: CAGTATCCAGAACAATAAGCAGGTCCTGCGGAACTT...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTCCACGTCTTCAATGTTaGCGCCACTGTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAPRLQC*RHCAGG
Trigger: CCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGG...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TTGAAGAGGACATGGAGGCCATACAGGAAAGAATCCAGGCTGATGGCCATATTGTCTGACACACTTTGCTaGGAGGCCGTGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKRTWRPYRKESRLMAILSDTLC*EAVSSR
Trigger: CCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGA...CAATATGGCCATCAGCCTGGATTCTTTCCTGTATGGCCTCCATGTCCTCTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAAAACCCTTTGTAAGTaGAGCGATCTGCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGKTLCK*SDLLSW
Trigger: CCAAGAGAGCAGATCGCTGCACTTACAAAGGGTTTT...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCCTGGTAGTTTTACCACACTaGAGGAAGAGAGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GHSSAEPLYPVTPFSACLVVLPH*RKRGVS
Trigger: TGAGACTCCTCTCTTCCTGCAGTGTGGTAAAACTAC...CAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp AAATACCTAAAAGCAGTGGGCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCGGAACGCAAGGCAGGTaGCACGCTCAGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KYLKAVGHLSSFKVKSIGGTQGR*HAQARS
Trigger: GCTCCTGGCCTGAGCGTGGCACCTGCCTTGCGTTCC...GCCAATCGATTTGACTTTAAAGCTGCTGAGATGGCCCACTGCTTTTAGGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACAGCTCCTCCACAGGCTTaGCCACGATGGTGTCACATT +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTAPPQA*PRWCHI
Trigger: AATGTGACACCATCGTGGCCAAGCCTGTGGAGGAGC...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACAGAACACTGATTGGTaGATACCCTCGTCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRQNTDW*IPSSSV
Trigger: GACTGAAGACGAGGGTATCCACCAATCAGTGTTCTG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTTGGCAGAATGAGGAATaGCAAAGAGCTGAGCAAACA +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGWQNEE*QRAEQT
Trigger: TGTTTGCTCAGCTCTTTGCCATTCCTCATTCTGCCA...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR CCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGTCCAGGAGAGGAGTTTaGGAGACGTTACCATATAGT +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGSRRGV*ETLPYS
Trigger: ACTATATGGTAACGTCTCCCAAACTCCTCTCCTGGA...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp TTCCGCATCCTTACCCACTTGGTCCAGAACCAGGTCCTAATTCTGTCCAAAGTGACGCTGCTGGATGACTaGGTGTCACTGGTATTGCCC +
Preference number: 4 (lower is better)
Translates to: FRILTHLVQNQVLILSKVTLLDD*VSLVLP
Trigger: GGGCAATACCAGTGACACCCAGTCATCCAGCAGCGT...CACTTTGGACAGAATTAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCCATGGATCGCGGTATTaGTTGGTTGTGGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESHGSRY*LVVVIW
Trigger: CCAAATCACCACAACCAACCAATACCGCGATCCATG...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGCCCAAGCAGAAGAGTTaGTTTATAGAACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGPKQKS*FIEPAA
Trigger: TGCAGCTGGTTCTATAAACCAACTCTTCTGCTTGGG...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp ACACTGGAGAGAAGAGCTTCAGGCCATACACAACGTAACTGGGAGGGTGCCTGGCTTTGTCTATTGCCCTaGAAAAAGGCTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TLERRASGHTQRNWEGAWLCLLP*KKAVVL
Trigger: CAAGACCACAGCCTTTTTTCAGGGCAATAGACAAAG...CCAGGCACCCTCCCAGTTACGTTGTGTATGGCCTGAAGCTCTTCTCTCCAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTCCAGTACATTCTCCTTaGTGTCTTCAGTTCGATCAA +
Preference number: 4 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGPVHSP*CLQFDQ
Trigger: TTGATCGAACTGAAGACATCAAGGAGAATGTACTGG...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCGTCTGCTATATGTTATaGTTTGGTTGTGTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPVCYML*FGCVRV
Trigger: TACACGGACACAACCAAATCATAACATATAGCAGAC...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TTCCGCATCCTTACCCACTTGGTCCAGAACCAGGTCCTAATTCTGTCCAAAGTGATACAGTGCTGGCGCTaGCTGCAAATGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: FRILTHLVQNQVLILSKVIQCWR*LQMRGQ
Trigger: CTGTCCTCTCATTTGCAGTCAGCGCCAGCACTGTAT...CACTTTGGACAGAATTAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp GAACATTGCAAGGTCACGCTCAATGTAATGCCACTTGGCAAAGGGCTGCAGGGAGAGAAATGGTCGCAATaGCAGGAATACAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: EHCKVTLNVMPLGKGLQGEKWSQ*QEYSAG
Trigger: GCCAGCACTGTATTCCTGTCATTGCGACCATTTCTC...TCCCTGCAGCCCTTTGCCAAGTGGCATTACATTGAGCGTGACCTTGCAATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCGATACTCTTTGTTTTTaGGAATGGGGTGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPDTLCF*EWGVKS
Trigger: GGATTTCACACCCCATTCTCAAAAACAAAGAGTATC...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGGATACTCTTTGTTTTTaGGAATGGGGTGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: ASSCTEVDVWRNVWRLSKDTLCF*EWGVKS
Trigger: GGATTTCACACCCCATTCTCAAAAACAAAGAGTATC...CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAGCAGAACCACGTACCAAGTCTCCGGTaGTTGCTTATTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: RSGPHCKQPRLSQTQQNHVPSLR*LLIKNA
Trigger: TGCATTTTTAATAAGCAATCACCGGAGACTTGGTAC...GTGGTTCTGCTGTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACAACGAACTGTAACTTGTaGAGCAGGTCCCCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTTNCNL*SRSPSL
Trigger: CAAGCTCGGGGACCTGCTTCACAAGTTACAGTTCGT...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTTGGGGTAGAAAAGATTaGTGTGGCAATCGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPWGRKD*CGNRLK
Trigger: TTTCAGACGATTGCCACATCAATCTTTTCTACCCCA...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTCCAGTCCTCGAAGTTaGAAGGTGACAAGACCATTT +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESSSPRS*KVTRPF
Trigger: AAATGGTCTTGTCACCTTTCAACTTCGAGGACTGGA...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR TCA 90 bp AGGCCATTGTATTCTGGGGGCATGTGGTCCCTACGACAATTGTCCATTTTGGAGGGAAAGAATCCAGGCTaGTGGCCATATTGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: RPLYSGGMWSLRQLSILEGKNPG*WPYCER
Trigger: CCGCTCACAATATGGCCATCAGCCTGGATTCTTTCC...CTCCAAAATGGACAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTCAGAGAGTCCGGAAATaGCGAGCGCGCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGQRVRK*RARWKS
Trigger: GCTTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTG...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCACCGTCACTGCTCGTCTaGCACACTTTGCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: THILTYPGFSQNTGDMTAPSLLV*HTLLRG
Trigger: GCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGG...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp AGGCCATTGTATTCTGGGGGCATGTGGTCCCTACGACAATTGTCCATTTTGGAGCAGGCCAGAATCATGTaGGAAGAGTCCTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RPLYSGGMWSLRQLSILEQARIM*EESCCV
Trigger: CACACAGCAGGACTCTTCTCACATGATTCTGGCCTG...CTCCAAAATGGACAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTGCCCCTCCCATGAGATaGACTGCAGTAACTTGCATG +
Preference number: 4 (lower is better)
Translates to: PSAKEPHMSGRTVTCEAGAPPMR*TAVTCM
Trigger: CATGCAAGTTACTGCAGTTCATCTCATGGGAGGGGC...ACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
CDS-3UTR TCA 90 bp GGATACGAGGAATGGCAAAGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGGGGCAACATTCGCAATaGCAGGAATACAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GYEEWQRAEQTRETKNPKGQHSQ*QEYSAG
Trigger: GCCAGCACTGTATTCCTGTCATTGCGAATGTTGCCC...CTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCTTTGCCATTCCTCGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR GCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGGGCCCACTGATGACTTaGAAGACAGAACTATCTTGT +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTGPLMT*KTELSC
Trigger: ACAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCC...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp ACACTGGAGAGAAGAGCTTCAGGCCATACACAACGTAACTGGGAGGGTGCCTGGGGCCCACTGATGACTTaGAAGACAGAACTATCTTGT +
Preference number: 4 (lower is better)
Translates to: TLERRASGHTQRNWEGAWGPLMT*KTELSC
Trigger: ACAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCC...CCAGGCACCCTCCCAGTTACGTTGTGTATGGCCTGAAGCTCTTCTCTCCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp GCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTCCCCGAACTGGTAAACCGGGTTaGAGAATGATGTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: AKEPHMSGRTVTCEAGPRTGKPG*RMMSAT
Trigger: TGTTGCGGACATCATTCTGCAACCCGGTTTACCAGT...TCGGGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486012.5
ENST00000490102.6
CDS-3UTR GCA 90 bp GGCCCAAAGTCCTCGGACGCATTCTTTGTTAACCTTGATCACCTTGAAGCTCAGGAACCCCAAGCCATCTaGCAAGGAGCCACATATGTC +
Preference number: 4 (lower is better)
Translates to: GPKSSDAFFVNLDHLEAQEPQAI*QGATYV
Trigger: GACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTC...CTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp AGGAATGGCAAAGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGCCATCTGGAACCCCAAGCCATCTaGCAAGGAGCCACATATGTC +
Preference number: 4 (lower is better)
Translates to: RNGKELSKHVKRRTPSHLEPQAI*QGATYV
Trigger: GACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTC...CAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCTTTGCCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486012.5
ENST00000490102.6
CDS-3UTR GCA 90 bp GGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCCTGCTCTTGTCTTTTCCGTaGACAGTGTTGAATCCATTC +
Preference number: 4 (lower is better)
Translates to: GHSSAEPLYPVTPFSACLLLSFP*TVLNPF
Trigger: GAATGGATTCAACACTGTGCACGGAAAAGACAAGAG...CAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp AGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGTACCCACTCGTCACGTaGTGTTATTCTGAAGTCACC +
Preference number: 4 (lower is better)
Translates to: RWPQFCRTSVSGDSFQCLYPLVT*CYSEVT
Trigger: GGTGACTTCAGAATAACAGCACGTGACGAGTGGGTA...CAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GGCCCAAAGTCCTCGGACGCATTCTTTGTTAACCTTGATCACCTTGAAGCTCAGTATTGTTCTGGATACTaGCGCGCTCCGGATTGCGGT +
Preference number: 4 (lower is better)
Translates to: GPKSSDAFFVNLDHLEAQYCSGY*RAPDCG
Trigger: ACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATA...CTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTGCACGGACTGGCTCCTaGCTTTCCTCCTGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFARTGS*LSSCLF
Trigger: GAACAGGCAGGAGGAAAGGCAGGAGCCAGTCCGTGC...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGCGCGGTGGATTTCCATaGACCGAATGGACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLRGGFP*TEWTQF
Trigger: AAACTGAGTCCATTCGGTGCATGGAAATCCACCGCG...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTAGCTCTCGGATCATCTaGAGCCATGGTAACAAGTGG +
Preference number: 4 (lower is better)
Translates to: NSSANVHYPLLTGITPIRSSRII*SHGNKW
Trigger: CCACTTGTTACCATGGCTGCAGATGATCCGAGAGCT...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCCTGTGCATGAGTGGAAAATaGAAAGGTGACAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: GHSSAEPLYPVTPFSACLCMSGK*KGDRSH
Trigger: GTGAGATCTGTCACCTTTGCATTTTCCACTCATGCA...CAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGTACAATGATCGCATTTaGAGGAAAAGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTYNDRI*RKSQVQ
Trigger: CTGCACCTGGCTTTTCCTCCAAATGCGATCATTGTA...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGATGACACTGGTGCTATaGGATGGTCTTCTAATAGAA +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKMTLVL*DGLLIE
Trigger: TTCTATTAGAAGACCATCCCATAGCACCAGTGTCAT...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTTACTGACTTGGTCGTaGTTTCCAGCATGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESLLTWS*FPACVL
Trigger: AAGCACACATGCTGGAAACCACGACCAAGTCAGTAA...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTTTTCCAAATCTGTCATaGAGTTTGGGGTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPFPNLS*SLGYCS
Trigger: TGAGCAGTACCCCAAACTCCATGACAGATTTGGAAA...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTAGCATGGGCGGCCTTTaGCTTAGCGCTGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFSMGGL*LSAECA
Trigger: GGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCT...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTGCTGTGCATGGATCGCGGTATTaGTTGGTTGTGGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: SANVHYPLLTGITPIRAVHGSRY*LVVVIW
Trigger: CCAAATCACCACAACCAACCAATACCGCGATCCATG...CACAGCACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTATCAGTTCTGTGTTCTaGAACAGCTCTCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCISSVF*NSSPFP
Trigger: TGGAAAAGGAGAGCTGTTCCAGAACACAGAACTGAT...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGAAGGGTTGCGGGGCTTaGAGAACAAGCACGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLKGCGA*RTSTRP
Trigger: GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTT...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCCTGATTAGCCATGTGTGGTaGCACACTCCTATAATCTCA +
Preference number: 4 (lower is better)
Translates to: GHSSAEPLYPVTPFSACLISHVW*HTPIIS
Trigger: TGAGATTATAGGAGTGTGCCACCACACATGGCTAAT...CAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGAAGATTAGCCATGTGTaGTGGCACACTCCTATAATC +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVKISHV*WHTPII
Trigger: GATTATAGGAGTGTGCCACCACACATGGCTAATCTT...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp AGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGAACACTCAAAAGGAGTaGGGGAACTCTCCAAACCTG +
Preference number: 4 (lower is better)
Translates to: RWPQFCRTSVSGDSFQCLNTQKE*GNSPNL
Trigger: CAGGTTTGGAGAGTTCCCCCACTCCTTTTGAGTGTT...CAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp ACACTGGAGAGAAGAGCTTCAGGCCATACACAACGTAACTGGGAGGGTGCCTGGAGCATCTGGGCATCATaGGATCCAAGGAAAAACACT +
Preference number: 4 (lower is better)
Translates to: TLERRASGHTQRNWEGAWSIWAS*DPRKNT
Trigger: AGTGTTTTTCCTTGGATCCCATGATGCCCAGATGCT...CCAGGCACCCTCCCAGTTACGTTGTGTATGGCCTGAAGCTCTTCTCTCCAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTCTTCCACCCCACGTTTaGAGCTGGAGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFLPPHV*SWSCSS
Trigger: GGAAGAGCAGCTCCAGCTTCAAACGTGGGGTGGAAG...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACATACAGTTTCCTGTGCTaGCAACTCCAATGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTYSFLC*QLQWPR
Trigger: TCTGGGCCATTGGAGTTGTCAGCACAGGAAACTGTA...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACACAGGCTGTCCTGAGGTaGCTTGCTTTGTACCCGTTC +
Preference number: 4 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTQAVLR*LALYPF
Trigger: GAACGGGTACAAAGCAAGTCACCTCAGGACAGCCTG...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACACTGCTCAGGCTGTCCTaGGGTGACTTGCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTLLRLS*GDLLCT
Trigger: GGTACAAAGCAAGTCACCTCAGGACAGCCTGAGCAG...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACACAGGCAGGTCCAGGGTaGTTACAGGAATTGAGATCT +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTQAGPG*LQELRS
Trigger: AGATCTCAATTCCTGTAATCACCCTGGACCTGCCTG...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GCCAAACATAGAGTCTTTCGAACCACATTAAATGGGCAACATCTCTCACTTCCCTGGTACTGGAGGAGCTaGCCTGCATCTCTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: AKHRVFRTTLNGQHLSLPWYWRS*PASLEP
Trigger: AGGCTCGAGAGATGCAGGTCAGCTCCTCCAGTACCA...GGGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGAAAGACTCTATGTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGGAGGCTTCCAGATCCTaGCTCACATGCCGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLEASRS*LTCRGV
Trigger: AACCCCACGGCATGTGAGTCAGGATCTGGAAGCCTC...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAACTGGCAGCTGGCCATaGCGAGGCAGAAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVATGSWP*RGRRGA
Trigger: TGCTCCTCTTCTGCCTCGTCATGGCCAGCTGCCAGT...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGGTACCAAGTCTCCGGTaGTTGCTTATTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGVPSLR*LLIKNA
Trigger: TGCATTTTTAATAAGCAATCACCGGAGACTTGGTAC...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR TCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGATAAAATGGACACCATaGAGAAATCCAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKIKWTP*RNPVRS
Trigger: GCTTCTTACTGGATTTCTTCATGGTGTCCATTTTAT...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCCAGTGGGTAACGAACTGTAACTTGTaGAGCAGGTCCCCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VRNSFMPAMIIRKMSQWVTNCNL*SRSPSL
Trigger: CAAGCTCGGGGACCTGCTTCACAAGTTACAGTTCGT...TACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR TCA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTGGGGTAGAAAAGATTaGTGTGGCAATCGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESWGRKD*CGNRLK
Trigger: TTTCAGACGATTGCCACATCAATCTTTTCTACCCCA...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR TCA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGATGCATCTGCCCAGCTaGTGGTATCAGACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CICPADGIRRAAVHFFFMMHLPS*WYQTCC
Trigger: GCAGCACGTCTGATACCATCAGCTGGGCAGATGCAT...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTAGACCTTTCTTAGGTTaGACCATGAGAATGAAAGCT +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCRPFLG*TMRMKA
Trigger: AGCTTTCATTCTCATGGTTCAACCTAAGAAAGGTCT...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGATTGAGGGCAGCTGCTaGTCAGGCTGTCCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLIEGSC*SGCPEV
Trigger: CACCTCAGGACAGCCTGAGCAGCAGCTGCCCTCAAT...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCACATTGAGGGCAGCTaGTGCTCAGGCTGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLHIEGS*CSGCPE
Trigger: CTCAGGACAGCCTGAGCAGCAGCTGCCCTCAATGTG...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGCTGACAGGATGTGTCTaGTGGCTCCTCCACAGGCTT +
Preference number: 4 (lower is better)
Translates to: CICPADGIRRAAVHFFFMLTGCV*WLLHRL
Trigger: AAGCCTGTGGAGGAGCCAGCAGACACATCCTGTCAG...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGAGGACAGCAACCACTaGGCAGACGATGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAEDSNH*ADDEIP
Trigger: TGGGATCTCATCGTCTGCGCAGTGGTTGCTGTCCTC...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCAAGTCTCCGGTGATTaGTTATTAAAAATGCATCAA +
Preference number: 4 (lower is better)
Translates to: LALLQTTPRVSATASARHQVSGD*LLKMHQ
Trigger: TTGATGCATTTTTAATAAGCAATCACCGGAGACTTG...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGACTGGTAAACCGGGTTaGAGAATGATGTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLTGKPG*RMMSAT
Trigger: TGTTGCGGACATCATTCTGCAACCCGGTTTACCAGT...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR GCA 90 bp GCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGGTTAATGTTGAACATTaGAAGGTCACGCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: ASSCTEVDVWRNVWRLSKVNVEH*KVTLNV
Trigger: TACATTGAGCGTGACCTTGCAATGTTCAACATTAAC...CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGTACCCACTCGTCACGTaGTGTTATTCTGAAGTCACC +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLYPLVT*CYSEVT
Trigger: GGTGACTTCAGAATAACAGCACGTGACGAGTGGGTA...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGTCGTCTGACACACTTTaGTGCGAGGCCGTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLSSDTL*CEAVSS
Trigger: GGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGA...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTGTGTGCGATGTTGTGTaGACAGTAAGGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGVCDVV*TVRVAG
Trigger: CCCCGCAACCCTTACTGTGCACACAACATCGCACAC...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp AGATGGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGAACCACCTATACAGATaGCATCAACCCATGTATGCC +
Preference number: 4 (lower is better)
Translates to: RWPQFCRTSVSGDSFQCLNHLYR*HQPMYA
Trigger: GGCATACATGGGTTGATGGCATCTGTATAGGTGGTT...CAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAACCTGACCCATTTTTaGCTTGACACCATCGATTTT +
Preference number: 4 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGNLTHF*LDTIDF
Trigger: AAAATCGATGGTGTCAAGGCAAAAATGGGTCAGGTT...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGAGCCATTCAGTTGACTaGATGCCGTCATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLSHSVD*MPSSWK
Trigger: CTTCCAAGATGACGGCATCCAGTCAACTGAATGGCT...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GGAGTTGGTGTATTTTTCCTTATTCCTCTACTTGGTACAACGAAAACCCTGGATCGTGGGGTTTCCGACTaGGTCCTGCGAGCCACCATC +
Preference number: 4 (lower is better)
Translates to: GVGVFFLIPLLGTTKTLDRGVSD*VLRATI
Trigger: GATGGTGGCTCGCAGGACCCAGTCGGAAACCCCACG...ATCCAGGGTTTTCGTTGTACCAAGTAGAGGAATAAGGAAAAATACACCAACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CCA 90 bp GTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCCAGTGGGTACATACACAACGTAACTaGGAGGGTGCCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: VRNSFMPAMIIRKMSQWVHTQRN*EGAWLW
Trigger: CCAAAGCCAGGCACCCTCCCAGTTACGTTGTGTATG...TACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CCA 90 bp CACAACGTAACTGGGAGGGTGCCTGGCTTTGGCCCCTGTATCAAGAAGCAAAATAATCTTTCATCTTCTTaGGGAGAGGGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HNVTGRVPGFGPCIKKQNNLSSS*GEGQQL
Trigger: CAGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATT...ATTTTGCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTTACGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGGGATCTCTTTCAATTTaGACTGCCAGTCTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTGSLSI*TASLVL
Trigger: CAACACAAGACTGGCAGTCCAAATTGAAAGAGATCC...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATTGCCGCCACTGTGCTaGCGGGCATTGCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: THILTYPGFSQNTGDMTALPPLC*RALQSF
Trigger: GAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAA...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGCTCAGGGTGGAGCTaGTGGAGGAGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLSSGWS*WRSPGW
Trigger: CCAGCCTGGGCTCCTCCACCAGCTCCACCCTGAGCT...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGATCAGTTCTGTGTTCTaGAACAGCTCTCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTISSVF*NSSPFP
Trigger: TGGAAAAGGAGAGCTGTTCCAGAACACAGAACTGAT...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTATTCTGGAACATGTGTaGTGCTGTCCGCGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGILEHV*CCPRCA
Trigger: GGCACACCGCGGACAGCACCACACATGTTCCAGAAT...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGTTTCCATGCACCGAATaGACTCAGTTTCTAAACTCA +
Preference number: 4 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVFPCTE*TQFLNS
Trigger: TGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAA...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGAGGAAGGTACTTCCCTaGAGAGCTGTTTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLRKVLP*RAVSHE
Trigger: TTCATGGGAAACAGCTCTCCAGGGAAGTACCTTCCT...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp AAATACCTAAAAGCAGTGGGCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCCAGGGGCTCTGCACGTaGGCCTTTCTGGATGACTGC +
Preference number: 4 (lower is better)
Translates to: KYLKAVGHLSSFKVKSIGQGLCT*AFLDDC
Trigger: GCAGTCATCCAGAAAGGCCCACGTGCAGAGCCCCTG...GCCAATCGATTTGACTTTAAAGCTGCTGAGATGGCCCACTGCTTTTAGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGTGCATCTCTCGAGCCTaGGAGAGACAGTCATTATTT +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLCISRA*ERQSLF
Trigger: AAATAATGACTGTCTCTCTCAGGCTCGAGAGATGCA...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAAACTGGCAGCTGGCCATaGCGAGGCAGAAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QHVNLLQKISAESVDLRETGSWP*RGRRGA
Trigger: TGCTCCTCTTCTGCCTCGTCATGGCCAGCTGCCAGT...TTCCCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000517808.1
CDS-3UTR TCA 90 bp GGCCCAAAGTCCTCGGACGCATTCTTTGTTAACCTTGATCACCTTGAAGCTCAGCCACTGCGCAGACGATaGGATCCCATTTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: GPKSSDAFFVNLDHLEAQPLRRR*DPILRH
Trigger: ATGTCTTAAAATGGGATCTCATCGTCTGCGCAGTGG...CTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp AAGCCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAAACCGGGTTGCAGAATaGTGTCCGCAACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: KPSAKEPHMSGRTVTCEANRVAE*CPQQLH
Trigger: ATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTT...TGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486012.5
ENST00000490102.6
CDS-3UTR TCA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGTTGACGCTGCTGGATaGCTGGGTGTCACTGGTATT +
Preference number: 4 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTVDAAG*LGVTGI
Trigger: AATACCAGTGACACCCAGTCATCCAGCAGCGTCAAC...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGTGTATAAAGTGCCGATaGTGTAACATGCAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTCIKCR*CNMQLS
Trigger: AGACAACTGCATGTTACATCATCGGCACTTTATACA...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp AAGCCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAACGAACTGTAACTTGTaGAGCAGGTCCCCGAGTTTG +
Preference number: 4 (lower is better)
Translates to: KPSAKEPHMSGRTVTCEATNCNL*SRSPSL
Trigger: CAAACTCGGGGACCTGCTTCACAAGTTACAGTTCGT...TGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
CDS-3UTR TCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGTGGCCCGTGTATTGGTaGGGCGGGGTCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRWPVYW*GGVRLN
Trigger: GTTCAGCCTGACCCCGCCTCACCAATACACGGGCCA...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517808.1
CDS-3UTR GCA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGGAAGAATATAGTCACTaGACTGCAGTAGAAAAATAC +
Preference number: 4 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKEEYSH*TAVEKY
Trigger: GTATTTTTCTACTGCAGTGCAGTGACTATATTCTTC...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAATTCAGTTGACTGGATaGCGTCATCTTGGAAGTATT +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRIQLTG*RHLGSI
Trigger: AATACTTCCAAGATGACGGCATCCAGTCAACTGAAT...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTCCACGGTTCCTTCACTaGACTGAAGCAGACTGCGTG +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFPRFLH*TEADCV
Trigger: CACGCAGTCTGCTTCAGTGCAGTGAAGGAACCGTGG...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCACCGGGATGTGTTGCATaGTCCACGGTTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: THILTYPGFSQNTGDMTAPGCVA*STVPSL
Trigger: CAGTGAAGGAACCGTGGAGCATGCAACACATCCCGG...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGAGCTACAACTTTATaGAGTAGGTCCATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLGATTL*SRSMSA
Trigger: TGCTGACATGGACCTACTGCATAAAGTTGTAGCTCC...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGTGGGCTGTTCTGCGCTaGTCTCCTGGCTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLWAVLR*SPGCHH
Trigger: GTGGTGGCAGCCAGGAGAGCAGCGCAGAACAGCCCA...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAAAAAACAAAGGTGTGTaGGATGTTGTGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRKNKGV*DVVCTV
Trigger: TACTGTGCACACAACATCGCACACACCTTTGTTTTT...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTCCCCGATCCCATGAGATGAACTaGAGTAACTTGCATGGTTTG +
Preference number: 4 (lower is better)
Translates to: AKEPHMSGRTVTCEAGPRSHEMN*SNLHGL
Trigger: CAAACCATGCAAGTTACTGCAGTTCATCTCATGGGA...TCGGGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
CDS-3UTR CCA 90 bp CAGAATGATGTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCTTTAGCAGGGAGTACTaGCAGCTGGCCATGACGAGG +
Preference number: 4 (lower is better)
Translates to: QNDVRNSFMPAMIIRKMSFSREY*QLAMTR
Trigger: CCTCGTCATGGCCAGCTGCCAGTACTCCCTGCTAAA...GGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGGACATGAGTACAGATaGGTCACTGCTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAGHEYR*VTALTA
Trigger: AGCCGTCAGAGCAGTGACCCATCTGTACTCATGTCC...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGTTGTCATCATTCCCTaGATCTCTTTCAATTTGGAC +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRVVIIP*ISFNLD
Trigger: GTCCAAATTGAAAGAGATCCAGGGAATGATGACAAC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTCCACAGAGGGACTCCTaGAGGGTCCTTGTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFPQRDS*RVLVKC
Trigger: ACACTTGACAAGGACCCTCCAGGAGTCCCTCTGTGG...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCCCTCCAGGATGTACTaGGTCTGCGTGATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLPSRMY*VCVISQ
Trigger: CTGGGAAATCACGCAGACCCAGTACATCCTGGAGGG...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TACAGGATATCTGCTCTGTATCTTGTCTGCTTTCAAGAGCAGCTAAGCCACTTCTCTCGAAGGACTGGATaGCCTCGTAGAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: YRISALYLVCFQEQLSHFSRRTG*PRRGLL
Trigger: CAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGA...GAAGTGGCTTAGCTGCTCTTGAAAGCAGACAAGATACAGAGCAGATATCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp AAGAGAGAAACAGTGAACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCGTCTGGAGGAATGTTTaGCGGCTCTCTAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: KRETVNSSANVHYPLLTGVWRNV*RLSKMG
Trigger: CCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGAC...GCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTTCACTGTTTCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTTGGTTGTGGTGATTTaGGGAGCACGAGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGLVVVI*GARGRA
Trigger: TGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGTGTGTGACTCCGCGGTaGATTTCCATGCACCGAATG +
Preference number: 4 (lower is better)
Translates to: CICPADGIRRAAVHFFFMCVTPR*ISMHRM
Trigger: CATTCGGTGCATGGAAATCCACCGCGGAGTCACACA...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGAATTTCCAACAATGAGTaGCGGTCTTTAAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: RWHQGAHMARRGASKEKRISNNE*RSLKNE
Trigger: TTCATTCTTTAAAGACCGCCACTCATTGTTGGAAAT...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGAGTAGCTCTCTGATTTaGAGAGAACGGTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLSSSLI*RERSCV
Trigger: GACACAAGACCGTTCTCTCCAAATCAGAGAGCTACT...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTGGTTTGGGATTCTaGACAAGTAACAGCTTATTT +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRAGLGF*TSNSLF
Trigger: AAATAAGCTGTTACTTGTCCAGAATCCCAAACCAGC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp AGGAATGGCAAAGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGCCATCTGCATCCTCTTTGTGTGTaGGTGCCGTCCTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: RNGKELSKHVKRRTPSHLHPLCV*VPSLLN
Trigger: ATTTAGCAAGGACGGCACCCACACACAAAGAGGATG...CAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCTTTGCCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
3UTR CAA 72 bp GTGCTGTGGGAGCTAAAGGCTAGCGCTGCCATATCCTaGAGGTCAGGTTCTAAAGTCAGGTCAAATGATAGA +
Preference number: 4 (lower is better)
Translates to: VLWELKASAAIS*RSGSKVRSNDR
Trigger: TCTATCATTTGACCTGACTTTAGAACCTGACCTCAAGGATATGGCAGCGCTAGCCTTTAGCTCCCACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp ACCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCTCTGAAGTTGCTGAAGGGCACTaGCGGCAGGGTCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TLLNKMDTMKKSSKKLSEVAEGH*RQGPQK
Trigger: CTTCTGGGGACCCTGCCGTCAGTGCCCTTCAGCAAC...TTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAGGCGGGGTCAGGCTaGACACTCTTTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLREAGSG*TLFSRE
Trigger: CTCCCTGCTAAAGAGTGTTCAGCCTGACCCCGCCTC...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000517808.1
CDS-3UTR TCA 90 bp TTAGCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGTGTCCGTGTATTGGTaGGGCGGGGTCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LANNMAYLHSMGSFPQMVVSVYW*GGVRLN
Trigger: GTTCAGCCTGACCCCGCCTCACCAATACACGGACAC...TACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAGTTCCTTCACTGCACTaGAGCAGACTGCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVAVPSLH*SRLRGA
Trigger: TGCTCCACGCAGTCTGCTTCAGTGCAGTGAAGGAAC...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp CAGAATGATGTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCATACAGTGCTGGCGCTaGCTGCAAATGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: QNDVRNSFMPAMIIRKMSIQCWR*LQMRGQ
Trigger: CTGTCCTCTCATTTGCAGTCAGCGCCAGCACTGTAT...GGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
CDS-3UTR TCA 90 bp AGAGCTGAGCAAACACGTGAAACGAAGAACCCCAAGCCATCTGCCAAGGAGCCAGTACCAAGTCTCCGGTaGTTGCTTATTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: RAEQTRETKNPKPSAKEPVPSLR*LLIKNA
Trigger: TGCATTTTTAATAAGCAATCACCGGAGACTTGGTAC...TGGCTCCTTGGCAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486012.5
ENST00000490102.6
CDS-3UTR TCA 90 bp TATCTTTTAAGGCTAAGTGGCCTAAAGGGATCCAAAGTGCCTCTTCATGTCCCCAACCGGGTTGCAGAATaGTGTCCGCAACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: YLLRLSGLKGSKVPLHVPNRVAE*CPQQLH
Trigger: ATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTT...GGGGACATGAAGAGGCACTTTGGATCCCTTTAGGCCACTTAGCCTTAAAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR TCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGACTCGTCAGGGCAAGTaGACTGGTCCTGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLTRQGK*TGPGEV
Trigger: AACTTCACCAGGACCAGTTCACTTGCCCTGACGAGT...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGATTGGTTGGTTGTGGTaGTTTGGGGAGCACGAGGGA +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLIGWLW*FGEHEG
Trigger: TCCCTCGTGCTCCCCAAATCACCACAACCAACCAAT...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTCACGGTTCTTGTTGTaGAGCTGCCACCATGTTACG +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGSRFLL*SCHHVT
Trigger: CGTAACATGGTGGCAGCTTCACAACAAGAACCGTGA...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CCAAACCTGACCCATTTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTTTGGCTGAGAAGCAGTaGAGCTCTAACTCCAGCATT +
Preference number: 4 (lower is better)
Translates to: PNLTHFCLDTIDFPCLPGLAEKQ*SSNSSI
Trigger: AATGCTGGAGTTAGAGCTTCACTGCTTCTCAGCCAA...ACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAAATGGGTCAGGTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp CCAAACCTGACCCATTTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTGACCCATTTTTGCCTTaGCACCATCGATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PNLTHFCLDTIDFPCLPGDPFLP*HHRFSL
Trigger: CAGGGAAAATCGATGGTGTCAAGGCAAAAATGGGTC...ACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAAATGGGTCAGGTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTCCTTTCACTTCCATTaGCTTCGGGACAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGSFHFH*LRDREH
Trigger: GTGTTCCCTGTCCCGAAGGCAATGGAAGTGAAAGGA...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TCCCCGAGCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCGAGGACAGCAACCACTaGGCAGACGATGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: SPSLLNKMDTMKKSSKKLEDSNH*ADDEIP
Trigger: TGGGATCTCATCGTCTGCGCAGTGGTTGCTGTCCTC...GAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGCTCGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR GCA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTCAAGTCTCCGGTGATTaGTTATTAAAAATGCATCAA +
Preference number: 4 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCQVSGD*LLKMHQ
Trigger: TTGATGCATTTTTAATAAGCAATCACCGGAGACTTG...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR GCA 90 bp GTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCCAGTGGGTAACTGGTAAACCGGGTTaGAGAATGATGTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: VRNSFMPAMIIRKMSQWVTGKPG*RMMSAT
Trigger: TGTTGCGGACATCATTCTGCAACCCGGTTTACCAGT...TACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
CDS-3UTR GCA 90 bp AAGCCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAACTGGTAAACCGGGTTaGAGAATGATGTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: KPSAKEPHMSGRTVTCEATGKPG*RMMSAT
Trigger: TGTTGCGGACATCATTCTGCAACCCGGTTTACCAGT...TGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486012.5
ENST00000490102.6
CDS-3UTR GCA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCAGAACCCCAAGCCATCTaGCAAGGAGCCACATATGTC +
Preference number: 4 (lower is better)
Translates to: THILTYPGFSQNTGDMTAEPQAI*QGATYV
Trigger: GACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTC...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTCGCCAGAGCTGTAGTTaGCCCAACGTCCAAGAACTA +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFRQSCS*PNVQEL
Trigger: TAGTTCTTGGACGTTGGGGCAACTACAGCTCTGGCG...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGTTAATGTTGAACATTaGAAGGTCACGCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRVNVEH*KVTLNV
Trigger: TACATTGAGCGTGACCTTGCAATGTTCAACATTAAC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR GCA 90 bp AGGCCATTGTATTCTGGGGGCATGTGGTCCCTACGACAATTGTCCATTTTGGAGAAGTTCCGCAGGACCTaGTTATTGTTCTGGATACTG +
Preference number: 4 (lower is better)
Translates to: RPLYSGGMWSLRQLSILEKFRRT*LLFWIL
Trigger: CAGTATCCAGAACAATAAGCAGGTCCTGCGGAACTT...CTCCAAAATGGACAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGCCGCACGCCCGTCACTaGTCGTCTGACACACTTTGC +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLPHARH*SSDTLC
Trigger: GCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGG...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGATTGGAGCACCAGATCTaGAAAATCAAAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRLEHQI*KIKASI
Trigger: AATACTTGCTTTGATTTTGCAGATCTGGTGCTCCAA...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCATTTAGCAGGGAGTACTaGCAGCTGGCCATGACGAGG +
Preference number: 4 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVAFSREY*QLAMTR
Trigger: CCTCGTCATGGCCAGCTGCCAGTACTCCCTGCTAAA...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CCA 90 bp GAACATTGCAAGGTCACGCTCAATGTAATGCCACTTGGCAAAGGGCTGCAGGGATCGAACCACATTAAATaGGCAACATCTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: EHCKVTLNVMPLGKGLQGSNHIK*ATSLTS
Trigger: GGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGA...TCCCTGCAGCCCTTTGCCAAGTGGCATTACATTGAGCGTGACCTTGCAATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp AAATACCTAAAAGCAGTGGGCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCACTGAGGTGGACGTCTaGAGGAATGTTTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: KYLKAVGHLSSFKVKSIGTEVDV*RNVWRL
Trigger: GAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGT...GCCAATCGATTTGACTTTAAAGCTGCTGAGATGGCCCACTGCTTTTAGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TACAGGATATCTGCTCTGTATCTTGTCTGCTTTCAAGAGCAGCTAAGCCACTTCAGCGATCTGCTCTCTTaGAGAGGCTATGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: YRISALYLVCFQEQLSHFSDLLS*RGYASL
Trigger: TAGGCTGGCATAGCCTCTCCAAGAGAGCAGATCGCT...GAAGTGGCTTAGCTGCTCTTGAAAGCAGACAAGATACAGAGCAGATATCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CCAAACCTGACCCATTTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTAAGCCACTGCAACTCTaGTGCTTGATGGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: PNLTHFCLDTIDFPCLPGKPLQL*CLMESM
Trigger: CATGCTTTCCATCAAGCACCAGAGTTGCAGTGGCTT...ACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAAATGGGTCAGGTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp ACTGCGCAGACGATGAGATCCCATTTTAAGACATCCGTCACTGAATCTTTCATCATGTCTTCAGTTCCGTaGGGTTTCCGACTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TAQTMRSHFKTSVTESFIMSSVP*GFRLGP
Trigger: AGGACCCAGTCGGAAACCCCACGGAACTGAAGACAT...GATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGGTGATTACAGGAATTaGGATCTGCTCGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAGDYRN*DLLGIW
Trigger: CCAAATGCCGAGCAGATCTCAATTCCTGTAATCACC...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTCCAGAAGACGGATCTTaGCTCTCAGAAGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAPEDGS*LSEVVV
Trigger: TACCACAACTTCTGAGAGTCAAGATCCGTCTTCTGG...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATAATGAGGCGGGGTCAGGCTaGACACTCTTTAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FHGQFSPNGSKSLTYMYNEAGSG*TLFSRE
Trigger: CTCCCTGCTAAAGAGTGTTCAGCCTGACCCCGCCTC...ATTATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp GAAAAATGTCCCAGTGGGTACCAAGTCTCCGGTGATTGCTTATTAAAAATGCATGTTCCTTCACTGCACTaGAGCAGACTGCGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: EKCPSGYQVSGDCLLKMHVPSLH*SRLRGA
Trigger: TGCTCCACGCAGTCTGCTTCAGTGCAGTGAAGGAAC...ATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAGAGAGGGTCAGCAGCTaGCTCTGCCAGATTTTGATG +
Preference number: 4 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVAERVSS*LCQILM
Trigger: CATCAAAATCTGGCAGAGTCAGCTGCTGACCCTCTC...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGGCGCTGACTGCAAATaGGAGGACAGCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRGADCK*EDSNHC
Trigger: GCAGTGGTTGCTGTCCTCTCATTTGCAGTCAGCGCC...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp ATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACGGCGCTGACTGCAAATaGGAGGACAGCAACCACTGC +
Preference number: 4 (lower is better)
Translates to: ILTFHGQFSPNGSKSLTYGADCK*EDSNHC
Trigger: GCAGTGGTTGCTGTCCTCTCATTTGCAGTCAGCGCC...GTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp ACTGCGCAGACGATGAGATCCCATTTTAAGACATCCGTCACTGAATCTTTCATCGAGAAATGGTCGCAATaGCAGGAATACAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TAQTMRSHFKTSVTESFIEKWSQ*QEYSAG
Trigger: GCCAGCACTGTATTCCTGTCATTGCGACCATTTCTC...GATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp AAGCCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGCTTCATGCCAGCAATaGTCATCAGAAAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: KPSAKEPHMSGRTVTCEAASCQQ*SSEKCP
Trigger: GGGACATTTTTCTGATGATCATTGCTGGCATGAAGC...TGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486012.5
ENST00000490102.6
CDS-3UTR TCA 90 bp AAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCTGGGCATGGGAAATGGAAACGAACTGTAACTTGTaGAGCAGGTCCCCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: KQFKRQGTLMQIWAWEMETNCNL*SRSPSL
Trigger: CAAGCTCGGGGACCTGCTTCACAAGTTACAGTTCGT...TTCCATTTCCCATGCCCAGATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR TCA 90 bp TTCCGCATCCTTACCCACTTGGTCCAGAACCAGGTCCTAATTCTGTCCAAAGTGGGCATTGAGGTCATCTaGAGCCAAAATAAAGCAATC +
Preference number: 4 (lower is better)
Translates to: FRILTHLVQNQVLILSKVGIEVI*SQNKAI
Trigger: GATTGCTTTATTTTGGCTTCAGATGACCTCAATGCC...CACTTTGGACAGAATTAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACACCAATTTCAATCAGGTaGACAAAGGCATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTPISIR*TKALRS
Trigger: TGACCTCAATGCCTTTGTTCACCTGATTGAAATTGG...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TACAGGATATCTGCTCTGTATCTTGTCTGCTTTCAAGAGCAGCTAAGCCACTTCAACCTCACCAGTCCTTaGACTCCACACATCCCCAAA +
Preference number: 4 (lower is better)
Translates to: YRISALYLVCFQEQLSHFNLTSP*TPHIPK
Trigger: TTTGGGGATGTGTGGAGTTCAAGGACTGGTGAGGTT...GAAGTGGCTTAGCTGCTCTTGAAAGCAGACAAGATACAGAGCAGATATCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp AAGAGAGAAACAGTGAACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCGGAACTCTCCAAACCTaGCCCATTTTTGCCTTGACA +
Preference number: 4 (lower is better)
Translates to: KRETVNSSANVHYPLLTGGTLQT*PIFALT
Trigger: TGTCAAGGCAAAAATGGGTCAGGTTTGGAGAGTTCC...GCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTTCACTGTTTCTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp TTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTCACATAGGAGCACTGCTAAGGTCAAACTCCTaGAGTAACCACCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FCLDTIDFPCLPGHIGALLRSNS*SNHLFP
Trigger: AGGAAAGAGGTGGTTACTTCAGGAGTTTGACCTTAG...CAGTGCTCCTATGTGACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR TCA 90 bp TCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTCCCGTAACTTGCATGGTTTaGGTTAAGGGAAATCATCCT +
Preference number: 4 (lower is better)
Translates to: SAKEPHMSGRTVTCEAGPVTCMV*VKGNHP
Trigger: AGGATGATTTCCCTTAACTCAAACCATGCAAGTTAC...GGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490102.6
CDS-3UTR GCA 90 bp GCCAAACATAGAGTCTTTCGAACCACATTAAATGGGCAACATCTCTCACTTCCCCAGAAAGTGTTGATTTaGGGGAAGAGCCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: AKHRVFRTTLNGQHLSLPQKVLI*GKSPRR
Trigger: CCTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTG...GGGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGAAAGACTCTATGTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp GGAGTTGGTGTATTTTTCCTTATTCCTCTACTTGGTACAACGAAAACCCTGGATCCACGGTTCCTTCACTaGACTGAAGCAGACTGCGTG +
Preference number: 4 (lower is better)
Translates to: GVGVFFLIPLLGTTKTLDPRFLH*TEADCV
Trigger: CACGCAGTCTGCTTCAGTGCAGTGAAGGAACCGTGG...ATCCAGGGTTTTCGTTGTACCAAGTAGAGGAATAAGGAAAAATACACCAACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp CAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAAAGTGCCGGGATGTGTTaGATGCTCCACGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QHVNLLQKISAESVDLRESAGMC*MLHGSF
Trigger: GAAGGAACCGTGGAGCATGCAACACATCCCGGCACT...TTCCCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAGAAGGCCGAAAACAGTaGCGGGATGTGTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVAEGRKQ*RDVLHA
Trigger: AGCATGCAACACATCCCGGCACTGTTTTCGGCCTTC...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp CAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAAGAGGACAGCAACCACTaGGCAGACGATGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: QHVNLLQKISAESVDLREEDSNH*ADDEIP
Trigger: TGGGATCTCATCGTCTGCGCAGTGGTTGCTGTCCTC...TTCCCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp TCCCCGAGCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCGAACCCCAAGCCATCTaGCAAGGAGCCACATATGTC +
Preference number: 4 (lower is better)
Translates to: SPSLLNKMDTMKKSSKKLEPQAI*QGATYV
Trigger: GACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTC...GAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGCTCGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR GCA 90 bp TCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTGCTGTGGTTAATGTTGAACATTaGAAGGTCACGCTCAATGTA +
Preference number: 4 (lower is better)
Translates to: SANVHYPLLTGITPIRAVVNVEH*KVTLNV
Trigger: TACATTGAGCGTGACCTTGCAATGTTCAACATTAAC...CACAGCACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACATACCCACTCGTCACGTaGTGTTATTCTGAAGTCACC +
Preference number: 4 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTYPLVT*CYSEVT
Trigger: GGTGACTTCAGAATAACAGCACGTGACGAGTGGGTA...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp ATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGTTGTATGTTGCCGCCACTGTaGTGGCGGGCATTGCAATCC +
Preference number: 4 (lower is better)
Translates to: MQLSYFHQGICFMALLSCMLPPL*WRALQS
Trigger: GGATTGCAATGCCCGCCAGCACAGTGGCGGCAACAT...ACAACTCAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGTCACTCCCCCACGGCTaGAAAGAAACGTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLSLPHG*KETSVS
Trigger: AGAAACAGACGTTTCTTTCCAGCCGTGGGGGAGTGA...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACAGAAGTTGGACTCATTTaGCATTTGTCCTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTEVGLI*HLSFLS
Trigger: GCTAAGGAAGGACAAATGCCAAATGAGTCCAACTTC...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACTATATGTTATGATTTaGTTGTGTCCGTGTATTGGT +
Preference number: 4 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRLYVMI*LCPCIG
Trigger: ACCAATACACGGACACAACCAAATCATAACATATAG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp AAGCCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCATGGCAGAATGAGGAATaGCAAAGAGCTGAGCAAACA +
Preference number: 4 (lower is better)
Translates to: KPSAKEPHMSGRTVTCEAWQNEE*QRAEQT
Trigger: TGTTTGCTCAGCTCTTTGCCATTCCTCATTCTGCCA...TGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490102.6
CDS-3UTR CCA 90 bp TTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTCACATAGGAGCACTGGGACATCCTGATAGCTaGAGCTACAACTTTATGCAG +
Preference number: 4 (lower is better)
Translates to: FCLDTIDFPCLPGHIGALGHPDS*SYNFMQ
Trigger: CTGCATAAAGTTGTAGCTCCAGCTATCAGGATGTCC...CAGTGCTCCTATGTGACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp AGGCCATTGTATTCTGGGGGCATGTGGTCCCTACGACAATTGTCCATTTTGGAGATCAGTTCTGTGTTCTaGAACAGCTCTCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RPLYSGGMWSLRQLSILEISSVF*NSSPFP
Trigger: TGGAAAAGGAGAGCTGTTCCAGAACACAGAACTGAT...CTCCAAAATGGACAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTCCCAATGTGAATCTCAGCTaGAGGGTGAAAATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SAKEPHMSGRTVTCEAGPNVNLS*RVKIEA
Trigger: TGCTTCTATTTTCACCCTCCAGCTGAGATTCACATT...GGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR CCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGAACTGGGAGGGTGCCTaGCTTTGGCCCGTGTATTGG +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRNWEGA*LWPVYW
Trigger: CCAATACACGGGCCAAAGCCAGGCACCCTCCCAGTT...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517808.1
CDS-3UTR TCA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGTTGCTTGGATTTCTGTaGTTAGTTATGTGTTCACCT +
Preference number: 4 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLLLGFL*LVMCSP
Trigger: AGGTGAACACATAACTAATCACAGAAATCCAAGCAA...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTTCATTCTGCTCAGCTaGGCCATTCAGTTGACTGGA +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFFILLS*AIQLTG
Trigger: TCCAGTCAACTGAATGGCTCAGCTGAGCAGAATGAA...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GCCAAACATAGAGTCTTTCGAACCACATTAAATGGGCAACATCTCTCACTTCCCTTCATTCTGCTCAGCTaGGCCATTCAGTTGACTGGA +
Preference number: 4 (lower is better)
Translates to: AKHRVFRTTLNGQHLSLPFILLS*AIQLTG
Trigger: TCCAGTCAACTGAATGGCTCAGCTGAGCAGAATGAA...GGGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGAAAGACTCTATGTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp GCCAAACATAGAGTCTTTCGAACCACATTAAATGGGCAACATCTCTCACTTCCCCCAGAAGACGGATCTTaGCTCTCAGAAGTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: AKHRVFRTTLNGQHLSLPPEDGS*LSEVVV
Trigger: TACCACAACTTCTGAGAGTCAAGATCCGTCTTCTGG...GGGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGAAAGACTCTATGTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp ACTGCGCAGACGATGAGATCCCATTTTAAGACATCCGTCACTGAATCTTTCATCCCACTGCGCAGACGATaGGATCCCATTTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: TAQTMRSHFKTSVTESFIPLRRR*DPILRH
Trigger: ATGTCTTAAAATGGGATCTCATCGTCTGCGCAGTGG...GATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp CAGAATGATGTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCCCACTGCGCAGACGATaGGATCCCATTTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: QNDVRNSFMPAMIIRKMSPLRRR*DPILRH
Trigger: ATGTCTTAAAATGGGATCTCATCGTCTGCGCAGTGG...GGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
CDS-3UTR TCA 90 bp GAAAAATGTCCCAGTGGGTACCAAGTCTCCGGTGATTGCTTATTAAAAATGCATATACAGTGCTGGCGCTaGCTGCAAATGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: EKCPSGYQVSGDCLLKMHIQCWR*LQMRGQ
Trigger: CTGTCCTCTCATTTGCAGTCAGCGCCAGCACTGTAT...ATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
CDS-3UTR TCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGTTTGAGAATGGGGTGTaGAATCCACATCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLFENGV*NPHPGM
Trigger: CATCCCTGGATGTGGATTTCACACCCCATTCTCAAA...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGGCTTCATGCCAGCAATaGTCATCAGAAAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: CICPADGIRRAAVHFFFMASCQQ*SSEKCP
Trigger: GGGACATTTTTCTGATGATCATTGCTGGCATGAAGC...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TCTTTTAAGGCTAAGTGGCCTAAAGGGATCCAAAGTGCCTCTTCATGTCCCCATATTGCCAGGGGTCAATaGAAAGCTTGCTTCCGTAAA +
Preference number: 4 (lower is better)
Translates to: SFKAKWPKGIQSASSCPHIARGQ*KACFRK
Trigger: TTTACGGAAGCAAGCTTTTCATTGACCCCTGGCAAT...ATGGGGACATGAAGAGGCACTTTGGATCCCTTTAGGCCACTTAGCCTTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR GCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGCACTGGTCTTCTCTGTaGCAACCACCCTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLHWSSL*QPPSGG
Trigger: TCCACCTGAGGGTGGTTGGCACAGAGAAGACCAGTG...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCACAGAAAGTGTTGATTTaGGGGAAGAGCCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVAQKVLI*GKSPRR
Trigger: CCTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTG...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGCCGGGATGTGTTGCATaGTCCACGGTTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRPGCVA*STVPSL
Trigger: CAGTGAAGGAACCGTGGAGCATGCAACACATCCCGG...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp TTAGCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTACCGGGATGTGTTGCATaGTCCACGGTTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: LANNMAYLHSMGSFPQMVPGCVA*STVPSL
Trigger: CAGTGAAGGAACCGTGGAGCATGCAACACATCCCGG...TACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp ATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACAGTGCCGGGATGTGTTaGATGCTCCACGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ILTFHGQFSPNGSKSLTYSAGMC*MLHGSF
Trigger: GAAGGAACCGTGGAGCATGCAACACATCCCGGCACT...GTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp ACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATGAGGACAGCAACCACTaGGCAGACGATGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: TFHGQFSPNGSKSLTYMYEDSNH*ADDEIP
Trigger: TGGGATCTCATCGTCTGCGCAGTGGTTGCTGTCCTC...ATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp TTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATAATTCCAGGGATGATGCTTaGGGAGCTGAGGGAGCACGT +
Preference number: 4 (lower is better)
Translates to: FHGQFSPNGSKSLTYMYNSRDDA*GAEGAR
Trigger: ACGTGCTCCCTCAGCTCCGCAAGCATCATCCCTGGA...ATTATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp GCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTCCCCGACAAGTCTCCGGTGATTaGTTATTAAAAATGCATCAA +
Preference number: 4 (lower is better)
Translates to: AKEPHMSGRTVTCEAGPRQVSGD*LLKMHQ
Trigger: TTGATGCATTTTTAATAAGCAATCACCGGAGACTTG...TCGGGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486012.5
ENST00000490102.6
CDS-3UTR CCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACAACTGGTGCTATGGGATaGTCTTCTAATAGAATGACA +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTTGAMG*SSNRMT
Trigger: TGTCATTCTATTAGAAGACCATCCCATAGCACCAGT...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTATCTGTCATGGAGTTTaGGGTACTGCTCATCGTGAT +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAICHGV*GTAHRD
Trigger: ATCACGATGAGCAGTACCCCAAACTCCATGACAGAT...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCAAGCCAGAACACTGATTaGTGGATACCCTCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: THILTYPGFSQNTGDMTASQNTD*WIPSSS
Trigger: TGAAGACGAGGGTATCCACCAATCAGTGTTCTGGCT...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACTGCGCAGACGATGAGATCCCATTTTAAGACATCCGTCACTGAATCTTTCATCAGCCATTCAGTTGACTaGATGCCGTCATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TAQTMRSHFKTSVTESFISHSVD*MPSSWK
Trigger: CTTCCAAGATGACGGCATCCAGTCAACTGAATGGCT...GATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CCA 90 bp GTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCCAGTGGGTATCTTTGCAAAAGCCTTaGCTCAAGGTCAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: VRNSFMPAMIIRKMSQWVSLQKP*LKVRNP
Trigger: TGGATTTCTGACCTTGAGCCAAGGCTTTTGCAAAGA...TACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CCA 90 bp ATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGTTGTTTTAGCAGGGAGTACTaGCAGCTGGCCATGACGAGG +
Preference number: 4 (lower is better)
Translates to: MQLSYFHQGICFMALLSCFSREY*QLAMTR
Trigger: CCTCGTCATGGCCAGCTGCCAGTACTCCCTGCTAAA...ACAACTCAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGTTTAGCAGGGAGTACTaGCAGCTGGCCATGACGAGG +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRFSREY*QLAMTR
Trigger: CCTCGTCATGGCCAGCTGCCAGTACTCCCTGCTAAA...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000517808.1
CDS-3UTR CCA 90 bp TTAGCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAAACTGGGAGGGTGCCTaGCTTTGGCCCCTGTATCAA +
Preference number: 4 (lower is better)
Translates to: LANNMAYLHSMGSFPQMVNWEGA*LWPLYQ
Trigger: TTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTT...TACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CCA 90 bp CAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAACATACACAACGTAACTaGGAGGGTGCCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QHVNLLQKISAESVDLREHTQRN*EGAWLW
Trigger: CCAAAGCCAGGCACCCTCCCAGTTACGTTGTGTATG...TTCCCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000517808.1
CDS-3UTR CCA 90 bp CCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTTCTGAAAGAAAAGCATaGCAGAATGAGGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: PSAKEPHMSGRTVTCEAGSERKA*QNEEWQ
Trigger: TTGCCATTCCTCATTCTGCCATGCTTTTCTTTCAGA...ACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490102.6
3UTR CAA 72 bp CATTTTAAGACATCCGTCACTGAATCTTTCATCTTCTaGGGGAGAGGGTCAGCAGCTGACTCTGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: HFKTSVTESFIF*GRGSAADSARF
Trigger: AAATCTGGCAGAGTCAGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTCAGTGACGGATGTCTTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCACTGGAGGGCTTTTGCTaGATTACTTCTCCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: THILTYPGFSQNTGDMTALEGFC*ITSPLS
Trigger: TGACAAAGGAGAAGTAATTCAGCAAAAGCCCTCCAG...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGGGGAAACCAGGACAATaGGTAAAATCGCCAGTACAT +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLGKPGQ*VKSPVH
Trigger: ATGTACTGGCGATTTTACTCATTGTCCTGGTTTCCC...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAGAGGGTCAGCAGCTaGCTCTGCCAGATTTTGATG +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRERVSS*LCQILM
Trigger: CATCAAAATCTGGCAGAGTCAGCTGCTGACCCTCTC...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp GTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCCAGTGGGTAGATACTCTTTGTTTTTaGGAATGGGGTGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: VRNSFMPAMIIRKMSQWVDTLCF*EWGVKS
Trigger: GGATTTCACACCCCATTCTCAAAAACAAAGAGTATC...TACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp CAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAAAACCGGGTTGCAGAATaGTGTCCGCAACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QHVNLLQKISAESVDLRENRVAE*CPQQLH
Trigger: ATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTT...TTCCCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp GGCCCAAAGTCCTCGGACGCATTCTTTGTTAACCTTGATCACCTTGAAGCTCAGATAAAATGGACACCATaGAGAAATCCAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GPKSSDAFFVNLDHLEAQIKWTP*RNPVRS
Trigger: GCTTCTTACTGGATTTCTTCATGGTGTCCATTTTAT...CTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR TCA 90 bp CCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTATAAAATGGACACCATaGAGAAATCCAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PSAKEPHMSGRTVTCEAGIKWTP*RNPVRS
Trigger: GCTTCTTACTGGATTTCTTCATGGTGTCCATTTTAT...ACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486012.5
ENST00000490102.6
CDS-3UTR GCA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACATCATCAATGAAGACATaGATAGCATCCACAGATATC +
Preference number: 4 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTSSMKT*IASTDI
Trigger: GATATCTGTGGATGCTATGCATGTCTTCATTGATGA...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGTTTCCGACTGGGTCCTaGGAGCCACCATCAGTAACA +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLFPTGS*EPPSVT
Trigger: TGTTACTGATGGTGGCTCGCAGGACCCAGTCGGAAA...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAACAGAAAGTGTTGATTTaGGGGAAGAGCCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QHVNLLQKISAESVDLREQKVLI*GKSPRR
Trigger: CCTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTG...TTCCCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000517808.1
CDS-3UTR GCA 90 bp TTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATAATCCACGGTTCCTTCACTaGACTGAAGCAGACTGCGTG +
Preference number: 4 (lower is better)
Translates to: FHGQFSPNGSKSLTYMYNPRFLH*TEADCV
Trigger: CACGCAGTCTGCTTCAGTGCAGTGAAGGAACCGTGG...ATTATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGTACAGATGGGTCACTaGTCTGACGGCTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRVQMGH*SDGSDG
Trigger: ACCATCTGAGCCGTCAGAGCAGTGACCCATCTGTAC...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp ATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACGTACAGATGGGTCACTaGTCTGACGGCTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: ILTFHGQFSPNGSKSLTYVQMGH*SDGSDG
Trigger: ACCATCTGAGCCGTCAGAGCAGTGACCCATCTGTAC...GTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp AAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCTGGGCATGGGAAATGGAAACTGGTAAACCGGGTTaGAGAATGATGTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: KQFKRQGTLMQIWAWEMETGKPG*RMMSAT
Trigger: TGTTGCGGACATCATTCTGCAACCCGGTTTACCAGT...TTCCATTTCCCATGCCCAGATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR GCA 90 bp AAGGCAACCCAATCATTTAAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCGAACCCCAAGCCATCTaGCAAGGAGCCACATATGTC +
Preference number: 4 (lower is better)
Translates to: KATQSFKQFKRQGTLMQIEPQAI*QGATYV
Trigger: GACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTC...GATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTTAAATGATTGGGTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR GCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGGGAGACATGACTGCATaGATGATCACGGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLGDMTA*MITVLV
Trigger: AACAAGAACCGTGATCATGCATGCAGTCATGTCTCC...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCAGGTATTACTGACTTaGTCGTGGTTTCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLQVLLT*SWFPAC
Trigger: ACATGCTGGAAACCACGACCAAGTCAGTAATACCTG...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGGCATGCCTCTTTTCATaGCTGGACTTACAAGACGAT +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLACLFS*LDLQDD
Trigger: ATCGTCTTGTAAGTCCAGCCATGAAAAGAGGCATGC...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTCTTTGCAAAAGCCTTaGCTCAAGGTCAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGSLQKP*LKVRNP
Trigger: TGGATTTCTGACCTTGAGCCAAGGCTTTTGCAAAGA...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATCATACACAACGTAACTaGGAGGGTGCCTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TFHGQFSPNGSKSLTYMYHTQRN*EGAWLW
Trigger: CCAAAGCCAGGCACCCTCCCAGTTACGTTGTGTATG...ATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CCA 90 bp TTAGCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGGACATGAGTACAGATaGGTCACTGCTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: LANNMAYLHSMGSFPQMVGHEYR*VTALTA
Trigger: AGCCGTCAGAGCAGTGACCCATCTGTACTCATGTCC...TACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CCA 90 bp GTCATCATCAATGTTAATGTTGAACATTGCAAGGTCACGCTCAATGTAATGCCAGTCTGGAGGAATGTTTaGCGGCTCTCTAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: VIINVNVEHCKVTLNVMPVWRNV*RLSKMG
Trigger: CCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGAC...TGGCATTACATTGAGCGTGACCTTGCAATGTTCAACATTAACATTGATGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGCATCCTAACGTATCCTaGCTTTTCACAGAATACTGG +
Preference number: 4 (lower is better)
Translates to: CICPADGIRRAAVHFFFMHPNVS*LFTEYW
Trigger: CCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATG...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGTGCTAGTATGGTCTTaGCTTTGCAAATCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAVLVWS*LCKSGF
Trigger: AAAACCAGATTTGCAAAGTCAAGACCATACTAGCAC...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATAATATACAGTGCTGGCGCTaGCTGCAAATGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: FHGQFSPNGSKSLTYMYNIQCWR*LQMRGQ
Trigger: CTGTCCTCTCATTTGCAGTCAGCGCCAGCACTGTAT...ATTATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp ATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACGAGAAATGGTCGCAATaGCAGGAATACAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ILTFHGQFSPNGSKSLTYEKWSQ*QEYSAG
Trigger: GCCAGCACTGTATTCCTGTCATTGCGACCATTTCTC...GTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp CTTGCTTCCGTAAAATGTGAATCTCAGCTGGAGGGTGAAAATAGAAGCAGAAAGGCTTCATGCCAGCAATaGTCATCAGAAAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: LASVKCESQLEGENRSRKASCQQ*SSEKCP
Trigger: GGGACATTTTTCTGATGATCATTGCTGGCATGAAGC...CTTTCTGCTTCTATTTTCACCCTCCAGCTGAGATTCACATTTTACGGAAGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR TCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAACCGGGTTGCAGAATaGTGTCCGCAACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLNRVAE*CPQQLH
Trigger: ATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTT...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TTAGCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAAACCGGGTTGCAGAATaGTGTCCGCAACAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LANNMAYLHSMGSFPQMVNRVAE*CPQQLH
Trigger: ATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTT...TACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTCTCGAAGTTGAAAGGTaGCAAGACCATTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTALEVER*QDHFQF
Trigger: AAATTGGAAATGGTCTTGTCACCTTTCAACTTCGAG...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCAGAAGTGATTCATTTTTaGTCCAGGAGAGGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: THILTYPGFSQNTGDMTAEVIHF*SRRGVW
Trigger: CCAAACTCCTCTCCTGGATCAAAAATGAATCACTTC...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp TCCCCGAGCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCATTGCCAGGGGTCAATaGAAAGCTTGCTTCCGTAAA +
Preference number: 4 (lower is better)
Translates to: SPSLLNKMDTMKKSSKKLIARGQ*KACFRK
Trigger: TTTACGGAAGCAAGCTTTTCATTGACCCCTGGCAAT...GAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGCTCGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR GCA 90 bp GAAAAATGTCCCAGTGGGTACCAAGTCTCCGGTGATTGCTTATTAAAAATGCATGCACCCACATATCTTTaGAAAAGCCTTGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: EKCPSGYQVSGDCLLKMHAPTYL*KSLGSR
Trigger: CCTTGAGCCAAGGCTTTTGCAAAGATATGTGGGTGC...ATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp ACCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCTCTGAAGAAGGCCGAAAACAGTaGCGGGATGTGTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: TLLNKMDTMKKSSKKLSEEGRKQ*RDVLHA
Trigger: AGCATGCAACACATCCCGGCACTGTTTTCGGCCTTC...TTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp TTGAAGAGGACATGGAGGCCATACAGGAAAGAATCCAGGCTGATGGCCATATTGTCTTTCAATTTGGACTaGCAGTCTTGTGTTGGAATT +
Preference number: 4 (lower is better)
Translates to: LKRTWRPYRKESRLMAILSFNLD*QSCVGI
Trigger: AATTCCAACACAAGACTGGCAGTCCAAATTGAAAGA...CAATATGGCCATCAGCCTGGATTCTTTCCTGTATGGCCTCCATGTCCTCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR GCA 90 bp ATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGTTGTAGAAATATAAGCTCCTaGTGCTGCCCGGCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: MQLSYFHQGICFMALLSCRNISS*CCPAQS
Trigger: ACTTTGGGCCGGGCAGCAGCAGGAGCTTATATTTCT...ACAACTCAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp TTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTCACATAGGAGCACTGGTTTATAGAACCAGCTaGATGAGTGGAAAATGCAAA +
Preference number: 4 (lower is better)
Translates to: FCLDTIDFPCLPGHIGALVYRTS*MSGKCK
Trigger: TTTGCATTTTCCACTCATGCAGCTGGTTCTATAAAC...CAGTGCTCCTATGTGACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCGAACCACATTAAATaGGCAACATCTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFSNHIK*ATSLTS
Trigger: GGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGA...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TCTTTTAAGGCTAAGTGGCCTAAAGGGATCCAAAGTGCCTCTTCATGTCCCCATAATGTGAATCTCAGCTaGAGGGTGAAAATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SFKAKWPKGIQSASSCPHNVNLS*RVKIEA
Trigger: TGCTTCTATTTTCACCCTCCAGCTGAGATTCACATT...ATGGGGACATGAAGAGGCACTTTGGATCCCTTTAGGCCACTTAGCCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR CCA 90 bp TCATTTAAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCTGGGCATGGGAAATGCAGATCTGGGCATaGGAAATGGAAGGACCAGAA +
Preference number: 4 (lower is better)
Translates to: SFKQFKRQGTLMQIWAWEMQIWA*EMEGPE
Trigger: TTCTGGTCCTTCCATTTCCCATGCCCAGATCTGCAT...TTCCCATGCCCAGATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTTAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR TCA 90 bp GAAAAATGTCCCAGTGGGTACCAAGTCTCCGGTGATTGCTTATTAAAAATGCATGGGAAACCAGGACAATaGGTAAAATCGCCAGTACAT +
Preference number: 4 (lower is better)
Translates to: EKCPSGYQVSGDCLLKMHGKPGQ*VKSPVH
Trigger: ATGTACTGGCGATTTTACTCATTGTCCTGGTTTCCC...ATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp ATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGTTGTCCACTGCGCAGACGATaGGATCCCATTTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: MQLSYFHQGICFMALLSCPLRRR*DPILRH
Trigger: ATGTCTTAAAATGGGATCTCATCGTCTGCGCAGTGG...ACAACTCAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp ATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACCCACTGCGCAGACGATaGGATCCCATTTTAAGACAT +
Preference number: 4 (lower is better)
Translates to: ILTFHGQFSPNGSKSLTYPLRRR*DPILRH
Trigger: ATGTCTTAAAATGGGATCTCATCGTCTGCGCAGTGG...GTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp ATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACCAAACAGCACGATGCTaGGAAATGGTCGCAATGACA +
Preference number: 4 (lower is better)
Translates to: ILTFHGQFSPNGSKSLTYQTARC*EMVAMT
Trigger: TGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTG...GTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp TTAGCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTATTTGAGAATGGGGTGTaGAATCCACATCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LANNMAYLHSMGSFPQMVFENGV*NPHPGM
Trigger: CATCCCTGGATGTGGATTTCACACCCCATTCTCAAA...TACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTGTACCAAGTCTCCGGTaGTTGCTTATTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFVPSLR*LLIKNA
Trigger: TGCATTTTTAATAAGCAATCACCGGAGACTTGGTAC...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GAAAAATGTCCCAGTGGGTACCAAGTCTCCGGTGATTGCTTATTAAAAATGCATGCTTCATGCCAGCAATaGTCATCAGAAAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: EKCPSGYQVSGDCLLKMHASCQQ*SSEKCP
Trigger: GGGACATTTTTCTGATGATCATTGCTGGCATGAAGC...ATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
CDS-3UTR TCA 90 bp TCATTTAAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCTGGGCATGGGAAGCTTCATGCCAGCAATaGTCATCAGAAAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: SFKQFKRQGTLMQIWAWEASCQQ*SSEKCP
Trigger: GGGACATTTTTCTGATGATCATTGCTGGCATGAAGC...TTCCCATGCCCAGATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTTAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR TCA 90 bp TCTTTTAAGGCTAAGTGGCCTAAAGGGATCCAAAGTGCCTCTTCATGTCCCCATATAAAATGGACACCATaGAGAAATCCAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SFKAKWPKGIQSASSCPHIKWTP*RNPVRS
Trigger: GCTTCTTACTGGATTTCTTCATGGTGTCCATTTTAT...ATGGGGACATGAAGAGGCACTTTGGATCCCTTTAGGCCACTTAGCCTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR TCA 90 bp AAATACCTAAAAGCAGTGGGCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCCCAATTTCAATCAGGTaGACAAAGGCATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KYLKAVGHLSSFKVKSIGPISIR*TKALRS
Trigger: TGACCTCAATGCCTTTGTTCACCTGATTGAAATTGG...GCCAATCGATTTGACTTTAAAGCTGCTGAGATGGCCCACTGCTTTTAGGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGTGTCCTGAGGTGACTTaGTTTGTACCCGTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLCPEVT*FVPVPL
Trigger: TAAGGGAACGGGTACAAAGCAAGTCACCTCAGGACA...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTAAATCTGGTTTTCCTTaGTTAGAACTGTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: LNASAQLMVSDVLLFISFKSGFP*LELCPL
Trigger: CAGTGGACACAGTTCTAAGCAAGGAAAACCAGATTT...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp ACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATACTGGTAAACCGGGTTaGAGAATGATGTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: TFHGQFSPNGSKSLTYMYTGKPG*RMMSAT
Trigger: TGTTGCGGACATCATTCTGCAACCCGGTTTACCAGT...ATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTTCTTTCAATTTGGACTaGCAGTCTTGTGTTGGAATT +
Preference number: 4 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGSFNLD*QSCVGI
Trigger: AATTCCAACACAAGACTGGCAGTCCAAATTGAAAGA...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR GCA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGCCGATGATGTAACATaGAGTTGTCTTATTTTCATC +
Preference number: 4 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAADDVT*SCLIFI
Trigger: GATGAAAATAAGACAACTGCATGTTACATCATCGGC...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGTGGAGAGGTTTCGACTaGCCTCTTCCTTTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLWRGFD*PLPFCH
Trigger: ATGGCAAAAAGGAAGAGGCCAGTCGAAACCTCTCCA...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGTTGTCGTCAGACTTTACACTaGTCTTCTCTGTGCCAACCA +
Preference number: 4 (lower is better)
Translates to: MQLSYFHQGICFMALLSCRQTLH*SSLCQP
Trigger: TGGTTGGCACAGAGAAGACCAGTGTAAAGTCTGACG...ACAACTCAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACAATCTTTCATCTTCTTaGGGAGAGGGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ILTFHGQFSPNGSKSLTYNLSSS*GEGQQL
Trigger: CAGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATT...GTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CCA 90 bp GTCATCATCAATGTTAATGTTGAACATTGCAAGGTCACGCTCAATGTAATGCCATCCCTAGGTAGGATGTaGTTAGTGGGGAGACATACA +
Preference number: 4 (lower is better)
Translates to: VIINVNVEHCKVTLNVMPSLGRM*LVGRHT
Trigger: TGTATGTCTCCCCACTAACCACATCCTACCTAGGGA...TGGCATTACATTGAGCGTGACCTTGCAATGTTCAACATTAACATTGATGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CCA 90 bp AAATACCTAAAAGCAGTGGGCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCAGTACAAGAAACACATaGAAGGGAGAGATGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KYLKAVGHLSSFKVKSIGSTRNT*KGEMSS
Trigger: GCTACTCATCTCTCCCTTCCATGTGTTTCTTGTACT...GCCAATCGATTTGACTTTAAAGCTGCTGAGATGGCCCACTGCTTTTAGGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CCA 90 bp TCATTTAAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCTGGGCATGGGAAACCTTAATGCAGATCTaGGCATGGGAAATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SFKQFKRQGTLMQIWAWETLMQI*AWEMEG
Trigger: TCCTTCCATTTCCCATGCCCAGATCTGCATTAAGGT...TTCCCATGCCCAGATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTTAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR CCA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCACATACTTACATTCCATaGGCAGTTTTCCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVAHTYIP*AVFPKW
Trigger: CCATTTGGGGAAAACTGCCCATGGAATGTAAGTATG...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGTCCTTTTTGCCATTGTaGATCTGCCTATTATTGCTT +
Preference number: 4 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLSFLPL*ICLLLL
Trigger: AAGCAATAATAGGCAGATTCACAATGGCAAAAAGGA...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGTGCATCTCTCGAGCCTaGGAGAGACAGTCATTATTT +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRCISRA*ERQSLF
Trigger: AAATAATGACTGTCTCTCTCAGGCTCGAGAGATGCA...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp ACCTTGCTAAATAAAATGGACACCATGAAGAAATCCAGTAAGAAGCTCTCTGAACAAACAGCACGATGCTaGGAAATGGTCGCAATGACA +
Preference number: 4 (lower is better)
Translates to: TLLNKMDTMKKSSKKLSEQTARC*EMVAMT
Trigger: TGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTG...TTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp GGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACAGATACTCTTTGTTTTTaGGAATGGGGTGTGAAATCC +
Preference number: 4 (lower is better)
Translates to: GILTFHGQFSPNGSKSLTDTLCF*EWGVKS
Trigger: GGATTTCACACCCCATTCTCAAAAACAAAGAGTATC...TGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp CTTGCTTCCGTAAAATGTGAATCTCAGCTGGAGGGTGAAAATAGAAGCAGAAAGGTACCAAGTCTCCGGTaGTTGCTTATTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: LASVKCESQLEGENRSRKVPSLR*LLIKNA
Trigger: TGCATTTTTAATAAGCAATCACCGGAGACTTGGTAC...CTTTCTGCTTCTATTTTCACCCTCCAGCTGAGATTCACATTTTACGGAAGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR TCA 90 bp CAGAATGATGTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCATAAAATGGACACCATaGAGAAATCCAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QNDVRNSFMPAMIIRKMSIKWTP*RNPVRS
Trigger: GCTTCTTACTGGATTTCTTCATGGTGTCCATTTTAT...GGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
CDS-3UTR GCA 90 bp ACTGCGCAGACGATGAGATCCCATTTTAAGACATCCGTCACTGAATCTTTCATCTCATCAATGAAGACATaGATAGCATCCACAGATATC +
Preference number: 4 (lower is better)
Translates to: TAQTMRSHFKTSVTESFISSMKT*IASTDI
Trigger: GATATCTGTGGATGCTATGCATGTCTTCATTGATGA...GATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp AAATACCTAAAAGCAGTGGGCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCAGCAAGTGTTTAAACTaGCAATGTAATGCTACCCAC +
Preference number: 4 (lower is better)
Translates to: KYLKAVGHLSSFKVKSIGSKCLN*QCNATH
Trigger: GTGGGTAGCATTACATTGGCAGTTTAAACACTTGCT...GCCAATCGATTTGACTTTAAAGCTGCTGAGATGGCCCACTGCTTTTAGGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR GCA 90 bp TATCTTTTAAGGCTAAGTGGCCTAAAGGGATCCAAAGTGCCTCTTCATGTCCCCTTATTTGCACTATTTTaGACAAGGCAACCCAATCAT +
Preference number: 4 (lower is better)
Translates to: YLLRLSGLKGSKVPLHVPLFALF*TRQPNH
Trigger: ATGATTGGGTTGCCTTGTGCAAAATAGTGCAAATAA...GGGGACATGAAGAGGCACTTTGGATCCCTTTAGGCCACTTAGCCTTAAAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR CCA 90 bp GAAAAATGTCCCAGTGGGTACCAAGTCTCCGGTGATTGCTTATTAAAAATGCATTCGAACCACATTAAATaGGCAACATCTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: EKCPSGYQVSGDCLLKMHSNHIK*ATSLTS
Trigger: GGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGA...ATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CCA 90 bp TCATTTAAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCTGGGCATGGGAATCGAACCACATTAAATaGGCAACATCTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: SFKQFKRQGTLMQIWAWESNHIK*ATSLTS
Trigger: GGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGA...TTCCCATGCCCAGATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTTAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR CCA 90 bp AAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCTGGGCATGGGAAATGGAATCTTTTAAGGCTAAGTaGCCTAAAGGGATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KQFKRQGTLMQIWAWEMESFKAK*PKGIQS
Trigger: ACTTTGGATCCCTTTAGGCCACTTAGCCTTAAAAGA...TTCCATTTCCCATGCCCAGATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR CCA 90 bp CTTGCTTCCGTAAAATGTGAATCTCAGCTGGAGGGTGAAAATAGAAGCAGAAAGTCGAACCACATTAAATaGGCAACATTCGCAATGACA +
Preference number: 4 (lower is better)
Translates to: LASVKCESQLEGENRSRKSNHIK*ATFAMT
Trigger: TGTCATTGCGAATGTTGCCCATTTAATGTGGTTCGA...CTTTCTGCTTCTATTTTCACCCTCCAGCTGAGATTCACATTTTACGGAAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR TCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGTTTTACAGGTATTACTaGCTTGGTCGTGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLFYRYY*LGRGFQ
Trigger: CTGGAAACCACGACCAAGTCAGTAATACCTGTAAAA...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp GCAACCCAATCATTTAAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCTGGGTACCAAGTCTCCGGTaGTTGCTTATTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: ATQSFKQFKRQGTLMQIWVPSLR*LLIKNA
Trigger: TGCATTTTTAATAAGCAATCACCGGAGACTTGGTAC...CCAGATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTTAAATGATTGGGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR TCA 90 bp TTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATAATGCTTCATGCCAGCAATaGTCATCAGAAAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: FHGQFSPNGSKSLTYMYNASCQQ*SSEKCP
Trigger: GGGACATTTTTCTGATGATCATTGCTGGCATGAAGC...ATTATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGCACTGGCCTGACATATaGTGTGATGAAAATGACACT +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLHWPDI*CDENDT
Trigger: AGTGTCATTTTCATCACATCATATGTCAGGCCAGTG...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CCA 90 bp ACTGCGCAGACGATGAGATCCCATTTTAAGACATCCGTCACTGAATCTTTCATCCTATATGTTATGATTTaGTTGTGTCCGTGTATTGGT +
Preference number: 4 (lower is better)
Translates to: TAQTMRSHFKTSVTESFILYVMI*LCPCIG
Trigger: ACCAATACACGGACACAACCAAATCATAACATATAG...GATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGTCTGCTATATGTTATaGTTTGGTTGTGTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRVCYML*FGCVRV
Trigger: TACACGGACACAACCAAATCATAACATATAGCAGAC...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR TCA 90 bp ATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACGTCTGCTATATGTTATaGTTTGGTTGTGTCCGTGTA +
Preference number: 4 (lower is better)
Translates to: ILTFHGQFSPNGSKSLTYVCYML*FGCVRV
Trigger: TACACGGACACAACCAAATCATAACATATAGCAGAC...GTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR TCA 90 bp ACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATGTACCAAGTCTCCGGTaGTTGCTTATTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: TFHGQFSPNGSKSLTYMYVPSLR*LLIKNA
Trigger: TGCATTTTTAATAAGCAATCACCGGAGACTTGGTAC...ATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGAAATCTGGTTTTCCTTaGTTAGAACTGTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRKSGFP*LELCPL
Trigger: CAGTGGACACAGTTCTAAGCAAGGAAAACCAGATTT...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCACAAGTCTCCGGTGATTaGTTATTAAAAATGCATCAA +
Preference number: 4 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVAQVSGD*LLKMHQ
Trigger: TTGATGCATTTTTAATAAGCAATCACCGGAGACTTG...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CCA 90 bp GGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACACTATATGTTATGATTTaGTTGTGTCCGTGTATTGGT +
Preference number: 4 (lower is better)
Translates to: GILTFHGQFSPNGSKSLTLYVMI*LCPCIG
Trigger: ACCAATACACGGACACAACCAAATCATAACATATAG...TGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CCA 90 bp TTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATAATTCGAACCACATTAAATaGGCAACATCTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: FHGQFSPNGSKSLTYMYNSNHIK*ATSLTS
Trigger: GGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGA...ATTATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CCA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGTCTGAAAGAAAAGCATaGCAGAATGAGGAATGGCAA +
Preference number: 4 (lower is better)
Translates to: CNMQLSYFHQGICFMALLSERKA*QNEEWQ
Trigger: TTGCCATTCCTCATTCTGCCATGCTTTTCTTTCAGA...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR TCA 90 bp ATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATAAAATGGACACCATaGAGAAATCCAGTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ILTFHGQFSPNGSKSLTYIKWTP*RNPVRS
Trigger: GCTTCTTACTGGATTTCTTCATGGTGTCCATTTTAT...GTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR GCA 90 bp GAAAAATGTCCCAGTGGGTACCAAGTCTCCGGTGATTGCTTATTAAAAATGCATCAAGTCTCCGGTGATTaGTTATTAAAAATGCATCAA +
Preference number: 4 (lower is better)
Translates to: EKCPSGYQVSGDCLLKMHQVSGD*LLKMHQ
Trigger: TTGATGCATTTTTAATAAGCAATCACCGGAGACTTG...ATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000486012.5
CDS-3UTR GCA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGCAAGTCTCCGGTGATTaGTTATTAAAAATGCATCAA +
Preference number: 4 (lower is better)
Translates to: KQHVNLLQKISAESVDLRQVSGD*LLKMHQ
Trigger: TTGATGCATTTTTAATAAGCAATCACCGGAGACTTG...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR GCA 90 bp AAGGCAACCCAATCATTTAAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCCAAGTCTCCGGTGATTaGTTATTAAAAATGCATCAA +
Preference number: 4 (lower is better)
Translates to: KATQSFKQFKRQGTLMQIQVSGD*LLKMHQ
Trigger: TTGATGCATTTTTAATAAGCAATCACCGGAGACTTG...GATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTTAAATGATTGGGTTGCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR CAA 90 bp GGTGGTGGTGACGGGCGGGGGCTGAGAGTGCAGGGACGTGGCCGAGGCGTGCAAGTGAGCAGCTCTTCCTaGTTGGACAGCACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: GGGDGRGLRVQGRGRGVQVSSSS*LDSTAP
Trigger: GGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCAC...TTGCACGCCTCGGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCACCACCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp GCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCCTTGGCTTCCCCTGGCAGGCAAGTGGCCTGGTTaGCAGCAGCAGCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: AILWLLVGRPAQPWLPLAGKWPG*QQQQPL
Trigger: CAGAGGCTGCTGCTGCTGCAAACCAGGCCACTTGCC...TGCCAGGGGAAGCCAAGGCTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGGCAAGTGGCCTGGTTaGCAGCAGCAGCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLGKWPG*QQQQPL
Trigger: CAGAGGCTGCTGCTGCTGCAAACCAGGCCACTTGCC...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TTGGACAGCACTGCGCCCCGCCAGGCCGGGTCGCCCTCGTGGCAGATGACCACCCGCATCCTTACCCACTaGGTCCAGAACCAGGTCCTA +
Preference number: 5 (lower is better)
Translates to: LDSTAPRQAGSPSWQMTTRILTH*VQNQVL
Trigger: TAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCG...GGTGGTCATCTGCCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGCTGTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp AGCGCCTCGGCCCGCTCACGGACACTCAGGTGGCCGGTGGTGGTGACGGGCGGGAGGAAACAGCCTGCATaGGATGAAGGACATGAGTAC +
Preference number: 5 (lower is better)
Translates to: SASARSRTLRWPVVVTGGRKQPA*DEGHEY
Trigger: GTACTCATGTCCTTCATCCAATGCAGGCTGTTTCCT...CCCGCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGAGCGGGCCGAGGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp TACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGAGCAGCTCTTCCTTGTaGGACAGCACTGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: YSSAPSSTTCRRVSSSSLSSSSL*DSTAPR
Trigger: GCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCT...CAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp CCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACTGTGCTGGCGGGCATTGCACCACCACTCGGGGCATaGTTGCCACCTGTCGTCGGG +
Preference number: 5 (lower is better)
Translates to: PSSVHVFNVAATVLAGIAPPLGA*LPPVVG
Trigger: CCCGACGACAGGTGGCAACAATGCCCCGAGTGGTGG...TGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGCAGTGCCGGGATGTGTaGCATGCTCCACGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLQCRDV*HAPRFL
Trigger: AAGGAACCGTGGAGCATGCAACACATCCCGGCACTG...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp AAGGTGGCACCCATGGCTGCAATCCTGTGGCTCCTTGTAGGGCGGCCGGCCCAGCGCAGGACCTGCTTATaGTTCTGGATACTGCCGCGC +
Preference number: 5 (lower is better)
Translates to: KVAPMAAILWLLVGRPAQRRTCL*FWILPR
Trigger: GCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCG...CTGGGCCGGCCGCCCTACAAGGAGCCACAGGATTGCAGCCATGGGTGCCACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp GTACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTCCATGTCCTCCTGGCTaGCTCTCCTGCAGACAACCC +
Preference number: 5 (lower is better)
Translates to: VLVGTLVHHVPQGEQLFLPCPPG*LSCRQP
Trigger: GGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGG...AAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGGTGAGCAGCTCTTCCTaGTTGGACAGCACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLVSSSS*LDSTAP
Trigger: GGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCAC...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp GCTGGTGGAGGAGCCCAGGCTGGACCTGATGAGCGCCTCGGCCCGCTCACGGACCCTCGGACGCATTCTTaGTTAACCTTGATCACCTTG +
Preference number: 5 (lower is better)
Translates to: AGGGAQAGPDERLGPLTDPRTHS*LTLITL
Trigger: CAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGG...GTCCGTGAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp TACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGCGCAGGACCTGCTTATaGTTCTGGATACTGCCGCGC +
Preference number: 5 (lower is better)
Translates to: YSSAPSSTTCRRVSSSSLRRTCL*FWILPR
Trigger: GCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCG...CAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp GTACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTCTGTGCTGGCGGGCATaGCAATCCTTCCGCATCCTT +
Preference number: 5 (lower is better)
Translates to: VLVGTLVHHVPQGEQLFLLCWRA*QSFRIL
Trigger: AAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAG...AAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGTCCACGTCTTCAATGTaGCCGCCACTGTGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRSTSSM*PPLCWR
Trigger: CCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGA...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTCCACTCGGGGCATTGTaGCCACCTGTCGTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGPLGAL*PPVVGA
Trigger: GGCCCCGACGACAGGTGGCAACAATGCCCCGAGTGG...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp TTCCGCAGGACCTGCTTATTGTTCTGGATACTGCCGCGCTCCGGATTGCGGTTGCCACTCGGGGCATTGTaGCCACCTGTCGTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: FRRTCLLFWILPRSGLRLPLGAL*PPVVGA
Trigger: GGCCCCGACGACAGGTGGCAACAATGCCCCGAGTGG...CAACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGACCACCACTCGGGGCATaGTTGCCACCTGTCGTCGGG +
Preference number: 5 (lower is better)
Translates to: RWHQGAHMARRGASKEKRPPLGA*LPPVVG
Trigger: CCCGACGACAGGTGGCAACAATGCCCCGAGTGGTGG...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCCATGTCCTCCTGGCTaGCTCTCCTGCAGACAACCC +
Preference number: 5 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLPCPPG*LSCRQP
Trigger: GGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGG...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS TCA 90 bp CGGGACAGGGAACACCTCCTCCCCCACCCTCAGGCAGGTCCAGGGTaGTTACAGGAATTGAGATCTGCTCGGCATTTGGAGAACCGGCCG +
Preference number: 5 (lower is better)
Translates to: RDREHLLPHPQAGPG*LQELRSARHLENRP
Trigger: CGGCCGGTTCTCCAAATGCCGAGCAGATCTCAATTCCTGTAATCACCCTGGACCTGCCTGAGGGTGGGGGAGGAGGTGTTCCCTGTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS GCA 90 bp CCCCCACCCTCAGGCAGGTCCAGGGTGATTACAGGAATTGAGATCTaGTCGGCATTTGGAGAACCGGCCGCCCCTGGGTTAGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PPPSGRSRVITGIEI*SAFGEPAAPGLVGS
Trigger: TGAGCCCACTAACCCAGGGGCGGCCGGTTCTCCAAATGCCGAGCAGATCTCAATTCCTGTAATCACCCTGGACCTGCCTGAGGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCAGAAAGTGTTGATTaGCGGGAAGAGCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLAESVD*REEPKE
Trigger: CTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTGC...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGAAGCAGCTCTTCCTTGTaGGACAGCACTGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RWHQGAHMARRGASKEKRSSSSL*DSTAPR
Trigger: GCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCT...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATTCCACGTCTTCAATGTaGCCGCCACTGTGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHSTSSM*PPLCWR
Trigger: CCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGA...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTCCACCACTCGGGGCATaGTTGCCACCTGTCGTCGGG +
Preference number: 5 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPPPLGA*LPPVVG
Trigger: CCCGACGACAGGTGGCAACAATGCCCCGAGTGGTGG...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS TCA 90 bp ACCTCCTCCCCCACCCTCAGGCAGGTCCAGGGTGATTACAGGAATTaGGATCTGCTCGGCATTTGGAGAACCGGCCGCCCCTGGGTTAGT +
Preference number: 5 (lower is better)
Translates to: TSSPTLRQVQGDYRN*DLLGIWRTGRPWVS
Trigger: ACTAACCCAGGGGCGGCCGGTTCTCCAAATGCCGAGCAGATCTCAATTCCTGTAATCACCCTGGACCTGCCTGAGGGTGGGGGAGGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS GCA 90 bp GCTCCTCCACAGGCTTGGCCACGATGGTGTCACATTGAGGGCAGCTaGTGCTCAGGCTGTCCTGAGGTGACTTGCTTTGTACCCGTTCCC +
Preference number: 5 (lower is better)
Translates to: APPQAWPRWCHIEGS*CSGCPEVTCFVPVP
Trigger: GGGAACGGGTACAAAGCAAGTCACCTCAGGACAGCCTGAGCAGCAGCTGCCCTCAATGTGACACCATCGTGGCCAAGCCTGTGGAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 90 bp CAGGTCCCCCTGGCAGGAGGTATCTACCTGACAGGATGTGTCTGCTaGCTCCTCCACAGGCTTGGCCACGATGGTGTCACATTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: QVPLAGGIYLTGCVC*LLHRLGHDGVTLRA
Trigger: TGCCCTCAATGTGACACCATCGTGGCCAAGCCTGTGGAGGAGCCAGCAGACACATCCTGTCAGGTAGATACCTCCTGCCAGGGGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TTGGACAGCACTGCGCCCCGCCAGGCCGGGTCGCCCTCGTGGCAGATGACCACCTGGATCTCTTTCAATTaGGACTGCCAGTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: LDSTAPRQAGSPSWQMTTWISFN*DCQSCV
Trigger: AACACAAGACTGGCAGTCCAAATTGAAAGAGATCCA...GGTGGTCATCTGCCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGCTGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp TTGCCACCTGTCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCACACTGTCCAGGGTCGTaGAAGGCTCTTGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LPPVVGAPPPSTSSMLPPHCPGS*KALVFS
Trigger: GGAAAAGACAAGAGCCTTCAACGACCCTGGACAGTG...TGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp AGCTCTCCTCCCCAGGGTGCACAGGGCGAAGGACAGAGTCACCAAGGGAGAGTCCTGCCGCGCTCCGGATaGCGGTTGCGAAGAAATATA +
Preference number: 5 (lower is better)
Translates to: SSPPQGAQGEGQSHQGRVLPRSG*RLRRNI
Trigger: TATATTTCTTCGCAACCGCAATCCGGAGCGCGGCAG...GACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGCTGGAAAAGCTCCTCTaGCCGAAGAGGAAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRLEKLL*PKRKLR
Trigger: CCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAG...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS GCA 90 bp ATGGCCCAGAAGAGTGATGAGAGGTTATGCTTTGCCCTCTGGAGCTaGAGCGGAGGGGAGGCGTGGAGAGGTTTCGACTGGCCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: MAQKSDERLCFALWS*SGGEAWRGFDWPLP
Trigger: AGGAAGAGGCCAGTCGAAACCTCTCCACGCCTCCCCTCCGCTGCAGCTCCAGAGGGCAAAGCATAACCTCTCATCACTCTTCTGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGCAGCTGTTGGTGAACTaGCTCTGCTCCGGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVQLLVN*LCSGSW
Trigger: CCACGACCCGGAGCAGAGCAAGTTCACCAACAGCTG...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGGTTGTGTCCGTGTATaGGTGAGGCGGGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGGCVRV*VRRGQA
Trigger: AGCCTGACCCCGCCTCACCAATACACGGACACAACC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGCAGTGCCGGGATGTGTaGCATGCTCCACGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: ASSCTEVDVWRNVWRLSKQCRDV*HAPRFL
Trigger: AAGGAACCGTGGAGCATGCAACACATCCCGGCACTG...CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp CTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGTTGAATCTTTCATCTTCTaGGGGAGAGGGTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LVGTLVHHVPQGEQLFLVESFIF*GRGSAA
Trigger: AGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTC...AACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCCACTGTCCAGGGTCGTaGAAGGCTCTTGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPHCPGS*KALVFS
Trigger: GGAAAAGACAAGAGCCTTCAACGACCCTGGACAGTG...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp GCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGTGGAGCATGATGACCTaGTACTCGTCGGCACCCTCG +
Preference number: 5 (lower is better)
Translates to: ASSCTEVDVWRNVWRLSKWSMMT*YSSAPS
Trigger: CGAGGGTGCCGACGAGTACAAGGTCATCATGCTCCA...CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATCTGCCGCGCTCCGGATaGCGGTTGCGAAGAAATATA +
Preference number: 5 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHLPRSG*RLRRNI
Trigger: TATATTTCTTCGCAACCGCAATCCGGAGCGCGGCAG...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGGGGCCCATCACGATGTaGACGCTGCTGGATGACTGG +
Preference number: 5 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGGPITM*TLLDDW
Trigger: CCAGTCATCCAGCAGCGTCAACATCGTGATGGGCCC...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp TTCCGCAGGACCTGCTTATTGTTCTGGATACTGCCGCGCTCCGGATTGCGGTTGGGGCCCATCACGATGTaGACGCTGCTGGATGACTGG +
Preference number: 5 (lower is better)
Translates to: FRRTCLLFWILPRSGLRLGPITM*TLLDDW
Trigger: CCAGTCATCCAGCAGCGTCAACATCGTGATGGGCCC...CAACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS TCA 90 bp GATGGTGTCACATTGAGGGCAGCTGCTGCTCAGGCTGTCCTGAGGTaGCTTGCTTTGTACCCGTTCCCTTATGGAGCCCCGGGGACAACT +
Preference number: 5 (lower is better)
Translates to: DGVTLRAAAAQAVLR*LALYPFPYGAPGTT
Trigger: AGTTGTCCCCGGGGCTCCATAAGGGAACGGGTACAAAGCAAGTCACCTCAGGACAGCCTGAGCAGCAGCTGCCCTCAATGTGACACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS TCA 90 bp GGGTCCTGCGAGCCACCATCAGTAACAGCTGTTGCTGAAGGGCACTaGCGGCAGGGTCCCCAGAAGACGGATCTTGACTCTCAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: GSCEPPSVTAVAEGH*RQGPQKTDLDSQKL
Trigger: CAACTTCTGAGAGTCAAGATCCGTCTTCTGGGGACCCTGCCGTCAGTGCCCTTCAGCAACAGCTGTTACTGATGGTGGCTCGCAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS GCA 90 bp CCTCCACAGGCTTGGCCACGATGGTGTCACATTGAGGGCAGCTGCTaGTCAGGCTGTCCTGAGGTGACTTGCTTTGTACCCGTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: PPQAWPRWCHIEGSC*SGCPEVTCFVPVPL
Trigger: TAAGGGAACGGGTACAAAGCAAGTCACCTCAGGACAGCCTGAGCAGCAGCTGCCCTCAATGTGACACCATCGTGGCCAAGCCTGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGGCTCCTCCACAGGCTaGGCCACGATGGTGTCACAT +
Preference number: 5 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRGSSTG*ATMVSH
Trigger: ATGTGACACCATCGTGGCCAAGCCTGTGGAGGAGCC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGGGAGGGTGCCTGGCTTaGGCCCCTGTATCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTGGCLA*APVSRS
Trigger: GCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCC...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGCTCTCCACTGCCAGTCTTGTGTaGGAATTATCCACTCGCCTT +
Preference number: 5 (lower is better)
Translates to: HFAARPCRPGPCPPGLLSTASLV*ELSTRL
Trigger: AAGGCGAGTGGATAATTCCAACACAAGACTGGCAGT...GGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp TTGCCACCTGTCGTCGGGGCCCCTCCTCCGTCCACGTCTTCAATGTTGCCGCCAACTGCCAGTCTTGTGTaGGAATTATCCACTCGCCTT +
Preference number: 5 (lower is better)
Translates to: LPPVVGAPPPSTSSMLPPTASLV*ELSTRL
Trigger: AAGGCGAGTGGATAATTCCAACACAAGACTGGCAGT...TGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp GCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCTGGAAGAAGTGATTCATTTTaGATCCAGGAGAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: AGCPRASGPARALRWTSGRSDSF*IQERSL
Trigger: CAAACTCCTCTCCTGGATCAAAAATGAATCACTTCT...TCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTCTGTGCTGGCGGGCATaGCAATCCTTCCGCATCCTT +
Preference number: 5 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCLCWRA*QSFRIL
Trigger: AAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAG...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGACTGGAAAAGCTCCTCTaGCCGAAGAGGAAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RWHQGAHMARRGASKEKRLEKLL*PKRKLR
Trigger: CCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAG...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCAAACCTCACCAGTCCTaGAACTCCACACATCCCCAA +
Preference number: 5 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPKPHQS*NSTHPQ
Trigger: TTGGGGATGTGTGGAGTTCAAGGACTGGTGAGGTTT...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGAGGCAGGCAGATCATTaGAAGTCAGGAGCTTGGTAC +
Preference number: 5 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLRQADH*KSGAWY
Trigger: GTACCAAGCTCCTGACTTCAAATGATCTGCCTGCCT...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp CTGACACACTTTGCTGCGAGGCCGTGTCGTCCAGGCCCATGTCCTCCTGGCTTGTCTAATCACTGTCCTTaGTCACTCTGGGAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: LTHFAARPCRPGPCPPGLSNHCP*SLWEPH
Trigger: ATGGGGCTCCCAGAGTGACAAAGGACAGTGATTAGA...CAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp GCCCAGCCTTGGCTTCCCCTGGCAGGAAGGTACTTCCCTGGAGAGCTGTTTCCCTGGTCCCTACGACAATaGTCCATTTTGGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: AQPWLPLAGRYFPGELFPWSLRQ*SILESR
Trigger: CCTGCTCTCCAAAATGGACAATTGTCGTAGGGACCA...GGGAAACAGCTCTCCAGGGAAGTACCTTCCTGCCAGGGGAAGCCAAGGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp TGGAACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGCAAGACAGAACTATCTaGTTGGGAAGTTACCCTGTA +
Preference number: 5 (lower is better)
Translates to: WNMCGAVRGVPLWAALCLQDRTI*LGSYPV
Trigger: TACAGGGTAACTTCCCAACAAGATAGTTCTGTCTTG...CAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAGCAGAACCACGCAGAAAGTGTTGATTaGCGGGAAGAGCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: RSGPHCKQPRLSQTQQNHAESVD*REEPKE
Trigger: CTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTGC...GTGGTTCTGCTGTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp CTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTGTTTTTGGACTGCCAGTCTaGTGTTGGAATTATCCACTC +
Preference number: 5 (lower is better)
Translates to: LVGTLVHHVPQGEQLFLVFGLPV*CWNYPL
Trigger: GAGTGGATAATTCCAACACAAGACTGGCAGTCCAAA...AACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp GCCGGCTGCCCGAGAGCCTCTGGGCCAGCTCGTGCACTGAGGTGGACGTCTGGAAAAATGGAATTGAGATaGTTGTCATCATTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: AGCPRASGPARALRWTSGKMELR*LSSFPG
Trigger: TCCAGGGAATGATGACAACAATCTCAATTCCATTTT...TCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp CGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCCACTGTCCAGGGTCGTaGAAGGCTCTTGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RCCVHSKGCGAWRTSTRPHCPGS*KALVFS
Trigger: GGAAAAGACAAGAGCCTTCAACGACCCTGGACAGTG...GGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGCCTCGGACGCATTCTTaGTTAACCTTGATCACCTTG +
Preference number: 5 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRPRTHS*LTLITL
Trigger: CAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGG...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTCGCATCCTTACCCACTaGGTCCAGAACCAGGTCCTA +
Preference number: 5 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPRILTH*VQNQVL
Trigger: TAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCG...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GGCCACAGTTCTGCAGAACCTCTGTATCCGGTGACTCCTTTCAGTGCCTGCCTGCGCATCCTTACCCACTaGGTCCAGAACCAGGTCCTA +
Preference number: 5 (lower is better)
Translates to: GHSSAEPLYPVTPFSACLRILTH*VQNQVL
Trigger: TAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCG...CAGGCAGGCACTGAAAGGAGTCACCGGATACAGAGGTTCTGCAGAACTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp CCAAACCTGACCCATTTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTCCACTCGGGGCATTGTaGCCACCTGTCGTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: PNLTHFCLDTIDFPCLPGPLGAL*PPVVGA
Trigger: GGCCCCGACGACAGGTGGCAACAATGCCCCGAGTGG...ACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAAATGGGTCAGGTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTCTGGAAAAGCTCCTCTaGCCGAAGAGGAAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCLEKLL*PKRKLR
Trigger: CCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAG...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS CCA 90 bp GAGAGGTTATGCTTTGCCCTCTGGAGCTGCAGCGGAGGGGAGGCGTaGAGAGGTTTCGACTGGCCTCTTCCTTTTTGCCATTGTGAATCT +
Preference number: 5 (lower is better)
Translates to: ERLCFALWSCSGGEA*RGFDWPLPFCHCES
Trigger: AGATTCACAATGGCAAAAAGGAAGAGGCCAGTCGAAACCTCTCCACGCCTCCCCTCCGCTGCAGCTCCAGAGGGCAAAGCATAACCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 90 bp GAGCACCCGGGCATGCCTCTTTTCATGGCTGGACTTACAAGACGATaGGTCAAGGTTAGTCTGGCCTTCCTTCCCCACCTTAGACTCGGA +
Preference number: 5 (lower is better)
Translates to: EHPGMPLFMAGLTRR*VKVSLAFLPHLRLG
Trigger: TCCGAGTCTAAGGTGGGGAAGGAAGGCCAGACTAACCTTGACCCATCGTCTTGTAAGTCCAGCCATGAAAAGAGGCATGCCCGGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 90 bp ACACCAGGACGCCCTGCATGCCTCTCAGATCAGCTTCCCCGAGGGTaGGGTGCCTTTTCCAGCACTCTAAGGTACCATGTCTGCATTTAT +
Preference number: 5 (lower is better)
Translates to: TPGRPACLSDQLPRG*GAFSSTLRYHVCIY
Trigger: ATAAATGCAGACATGGTACCTTAGAGTGCTGGAAAAGGCACCCCACCCTCGGGGAAGCTGATCTGAGAGGCATGCAGGGCGTCCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467336.6
CDS-3UTR CAA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGGTCCTTTCACTTCCATaGCCTTCGGGACAGGGAACA +
Preference number: 5 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGVLSLP*PSGQGT
Trigger: TGTTCCCTGTCCCGAAGGCAATGGAAGTGAAAGGAC...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CACAACGTAACTGGGAGGGTGCCTGGCTTTGGCCCCTGTATCAAGAAGCAAAATGGAGGGTGCCTGGCTTaGGCCCCTGTATCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: HNVTGRVPGFGPCIKKQNGGCLA*APVSRS
Trigger: GCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCC...ATTTTGCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTTACGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp AACATGTGTGGTGCTGTCCGCGGTGTGCCGCTCTGGGCAGCGCTGTGCCTGGCCAAACAGCATGTCAATTaGCTCCAAAAGATAAGTGCA +
Preference number: 5 (lower is better)
Translates to: NMCGAVRGVPLWAALCLAKQHVN*LQKISA
Trigger: TGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT...GGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GCCAGCTCGTGCACTGAGGTGGACGTCTGGAGGAATGTTTGGCGGCTCTCTAAGAGCAGGTCCCCGAGCTaGCTAAATAAAATGGACACC +
Preference number: 5 (lower is better)
Translates to: ASSCTEVDVWRNVWRLSKSRSPS*LNKMDT
Trigger: GGTGTCCATTTTATTTAGCAAGCTCGGGGACCTGCT...CTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGTTTGGACTGCCAGTCTaGTGTTGGAATTATCCACTC +
Preference number: 5 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRFGLPV*CWNYPL
Trigger: GAGTGGATAATTCCAACACAAGACTGGCAGTCCAAA...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp GTACTCGTCGGCACCCTCGTCCACCACGTGCCGCAGGGTGAGCAGCTCTTCCTTCATTCTTTGTTAACCTaGATCACCTTGAAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VLVGTLVHHVPQGEQLFLHSLLT*ITLKLR
Trigger: CCTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATG...AAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGCGCTCCGGATTGCGGTaGCGAAGAAATATAAGCTCC +
Preference number: 5 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGRSGLR*RRNISS
Trigger: GGAGCTTATATTTCTTCGCAACCGCAATCCGGAGCG...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGGGATCGCGGTATTGGTaGGTTGTGGTGATTTGGGGA +
Preference number: 5 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVGSRYW*VVVIWG
Trigger: TCCCCAAATCACCACAACCAACCAATACCGCGATCC...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp CTTGCTCTCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATTTTGAAGTCAGGAGCTaGGTACCAGTCTGGCAAACA +
Preference number: 5 (lower is better)
Translates to: LALLQTTPRVSATASARHFEVRS*VPVWQT
Trigger: TGTTTGCCAGACTGGTACCAAGCTCCTGACTTCAAA...ATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp GCTCCAGCCAAGGCAAACAGCACGATGCTGAGAAATGGTCGCAATGACAGGAATCAGTGCCGGGATGTGTaGCATGCTCCACGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: APAKANSTMLRNGRNDRNQCRDV*HAPRFL
Trigger: AAGGAACCGTGGAGCATGCAACACATCCCGGCACTG...ATTCCTGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTGCCTTGGCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGAATCTTTCATCTTCTaGGGGAGAGGGTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCESFIF*GRGSAA
Trigger: AGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTC...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR CAA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTAGCAGGTCCCCGAGCTaGCTAAATAAAATGGACACC +
Preference number: 5 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCSRSPS*LNKMDT
Trigger: GGTGTCCATTTTATTTAGCAAGCTCGGGGACCTGCT...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR CAA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCCGCTCCGGATTGCGGTaGCGAAGAAATATAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESRSGLR*RRNISS
Trigger: GGAGCTTATATTTCTTCGCAACCGCAATCCGGAGCG...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGGATCGCGGTATTGGTaGGTTGTGGTGATTTGGGGA +
Preference number: 5 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRGSRYW*VVVIWG
Trigger: TCCCCAAATCACCACAACCAACCAATACCGCGATCC...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp GTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTCCCCAAGCAGAAGAGTaGGTTTATAGAACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VGCGDLGSTRESNAGGRCPQAEE*VYRTSC
Trigger: GCAGCTGGTTCTATAAACCAACTCTTCTGCTTGGGG...ACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp TTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTCACATAGGAGCACTGACCACCTCTTTCCTCTaGGCCAGGACAGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: FCLDTIDFPCLPGHIGALTTSFL*ARTAWG
Trigger: CCCCCAGGCTGTCCTGGCCAAGAGGAAAGAGGTGGT...CAGTGCTCCTATGTGACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAGAACACAGAGGCCATaGTATTCTGGGGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESRTQRP*YSGGMW
Trigger: CCACATGCCCCCAGAATACAATGGCCTCTGTGTTCT...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CCA 90 bp GTAGCCAGAACACTGATTGGTGGATACCCTCGTCTTCAGTCTCTCTaGAGTCCTTTCACTTCCATTGCCTTCGGGACAGGGAACACCTCC +
Preference number: 5 (lower is better)
Translates to: VARTLIGGYPRLQSL*SPFTSIAFGTGNTS
Trigger: GGAGGTGTTCCCTGTCCCGAAGGCAATGGAAGTGAAAGGACTCCAGAGAGACTGAAGACGAGGGTATCCACCAATCAGTGTTCTGGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACCTGGATGCCGTCATCTaGGAAGTATTAATGGATTCT +
Preference number: 5 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHLDAVI*EVLMDS
Trigger: AGAATCCATTAATACTTCCAAGATGACGGCATCCAG...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp GGCAGCCAAGACGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACGGTGCTAGTATGGTCTaGACTTTGCAAATCTGGTTT +
Preference number: 5 (lower is better)
Translates to: GSQDAPGHTVNSRGYPRHGASMV*TLQIWF
Trigger: AAACCAGATTTGCAAAGTCAAGACCATACTAGCACC...GTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCGTCTTGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGACCCAGAAGACGGATCTaGACTCTCAGAAGTTGTGGT +
Preference number: 5 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRPRRRI*TLRSCG
Trigger: ACCACAACTTCTGAGAGTCAAGATCCGTCTTCTGGG...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CACAGCCTCAGCCAGACATCGGTCATGAAGCTGCCCCTGCTCGGTGGCATCAGGTCATCAATGTTAATGTaGAACATTGCAAGGTCACGC +
Preference number: 5 (lower is better)
Translates to: HSLSQTSVMKLPLLGGIRSSMLM*NIARSR
Trigger: GCGTGACCTTGCAATGTTCAACATTAACATTGATGA...CCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACATGGAGCATGATGACCTaGTACTCGTCGGCACCCTCG +
Preference number: 5 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTWSMMT*YSSAPS
Trigger: CGAGGGTGCCGACGAGTACAAGGTCATCATGCTCCA...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTGCCTCGGACGCATTCTTaGTTAACCTTGATCACCTTG +
Preference number: 5 (lower is better)
Translates to: LVVVIWGARGRAMQVGGVPRTHS*LTLITL
Trigger: CAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGG...CACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACACGCAGGACCTGCTTATaGTTCTGGATACTGCCGCGC +
Preference number: 5 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTRRTCL*FWILPR
Trigger: GCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCG...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS GCA 90 bp CTCAAGAAGACATCTGTCCCACTGTCCACACTGAGCACCCGGGCATaGCTCTTTTCATGGCTGGACTTACAAGACGATGGGTCAAGGTTA +
Preference number: 5 (lower is better)
Translates to: LKKTSVPLSTLSTRA*LFSWLDLQDDGSRL
Trigger: TAACCTTGACCCATCGTCTTGTAAGTCCAGCCATGAAAAGAGGCATGCCCGGGTGCTCAGTGTGGACAGTGGGACAGATGTCTTCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGGTAAGCTTTCCACTTaGATACCAGGTGAGGTAGAT +
Preference number: 5 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGGKLST*IPGEVD
Trigger: ATCTACCTCACCTGGTATCAAAGTGGAAAGCTTACC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAGCAGAACCACCAAATCTGGTTTTCCTaGCTTAGAACTGTGTCCACT +
Preference number: 5 (lower is better)
Translates to: RSGPHCKQPRLSQTQQNHQIWFS*LRTVST
Trigger: AGTGGACACAGTTCTAAGCAAGGAAAACCAGATTTG...GTGGTTCTGCTGTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp CGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAGCAGAACCACGACAGAACTATCTTGTaGGGAAGTTACCCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: RSGPHCKQPRLSQTQQNHDRTIL*GSYPVD
Trigger: ATCTACAGGGTAACTTCCCAACAAGATAGTTCTGTC...GTGGTTCTGCTGTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp GGAATGTTTGGCGGCTCTCTAAGATGGGGCCAGATGAGCTCAGCATGGGCGGCCTCATCAATGTTAATGTaGAACATTGCAAGGTCACGC +
Preference number: 5 (lower is better)
Translates to: GMFGGSLRWGQMSSAWAASSMLM*NIARSR
Trigger: GCGTGACCTTGCAATGTTCAACATTAACATTGATGA...GGCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACATCCACGTCTTCAATGTaGCCGCCACTGTGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTSTSSM*PPLCWR
Trigger: CCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGA...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACACCATGTCCTCCTGGCTaGCTCTCCTGCAGACAACCC +
Preference number: 5 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTPCPPG*LSCRQP
Trigger: GGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGG...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGTCATGGATCGCGGTATaGGTTGGTTGTGGTGATTTG +
Preference number: 5 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTSWIAV*VGCGDL
Trigger: CAAATCACCACAACCAACCAATACCGCGATCCATGA...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TCCTGCAGACAACCCCGAGAGTGTCCGCCACAGCCTCAGCCAGACATCGGTCATTTGGAGAGAACGGTCTaGTGTCTTAATCAATTTGGA +
Preference number: 5 (lower is better)
Translates to: SCRQPRECPPQPQPDIGHLERTV*CLNQFG
Trigger: TCCAAATTGATTAAGACACAAGACCGTTCTCTCCAA...ATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp TCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTGCTGTGAGCGCTGCCATATCCTaGAGGTCAGGTTCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: SANVHYPLLTGITPIRAVSAAIS*RSGSKV
Trigger: GACTTTAGAACCTGACCTCAAGGATATGGCAGCGCT...CACAGCACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp GCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAGGTCCCCGAGTGTGGGTGCCGTCCTaGCTAAATAAAATGGACACC +
Preference number: 5 (lower is better)
Translates to: AKEPHMSGRTVTCEAGPRVWVPS*LNKMDT
Trigger: GGTGTCCATTTTATTTAGCAAGGACGGCACCCACAC...TCGGGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490102.6
CDS TCA 90 bp CTGCAGAACTTTTACTCAAGAAGACATCTGTCCCACTGTCCACACTaGGCACCCGGGCATGCCTCTTTTCATGGCTGGACTTACAAGACG +
Preference number: 5 (lower is better)
Translates to: LQNFYSRRHLSHCPH*APGHASFHGWTYKT
Trigger: CGTCTTGTAAGTCCAGCCATGAAAAGAGGCATGCCCGGGTGCTCAGTGTGGACAGTGGGACAGATGTCTTCTTGAGTAAAAGTTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 90 bp CTCTTTTCATGGCTGGACTTACAAGACGATGGGTCAAGGTTAGTCTaGCCTTCCTTCCCCACCTTAGACTCGGAGCCTGTATCAGGTGTA +
Preference number: 5 (lower is better)
Translates to: LFSWLDLQDDGSRLV*PSFPTLDSEPVSGV
Trigger: TACACCTGATACAGGCTCCGAGTCTAAGGTGGGGAAGGAAGGCCAGACTAACCTTGACCCATCGTCTTGTAAGTCCAGCCATGAAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGTCACCTTTGGCCTCCTaGTCTTTATTTGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VPHGSRYWLVVVIWGARGSPLAS*SLFGFS
Trigger: AGAAAAGCCAAATAAAGACAAGGAGGCCAAAGGTGA...CCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTCAAATCTGGTTTTCCTaGCTTAGAACTGTGTCCACT +
Preference number: 5 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGQIWFS*LRTVST
Trigger: AGTGGACACAGTTCTAAGCAAGGAAAACCAGATTTG...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGGTGCTAGTATGGTCTaGACTTTGCAAATCTGGTTT +
Preference number: 5 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPGASMV*TLQIWF
Trigger: AAACCAGATTTGCAAAGTCAAGACCATACTAGCACC...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GGAATGTTTGGCGGCTCTCTAAGATGGGGCCAGATGAGCTCAGCATGGGCGGCCATCTCTCACTTCCCGTaGATGATACTCTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: GMFGGSLRWGQMSSAWAAISHFP*MILFVF
Trigger: AAAAACAAAGAGTATCATCAACGGGAAGTGAGAGAT...GGCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTTGGATCTCTTTCAATTaGGACTGCCAGTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: DVVCTVRVAGLGEQARVPWISFN*DCQSCV
Trigger: AACACAAGACTGGCAGTCCAAATTGAAAGAGATCCA...AGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CGGTGGCATCAGGGGGCTCACATGGCTCGGAGAGGTGCTTCCAAAGAGAAGAGAAGAAGTGATTCATTTTaGATCCAGGAGAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: RWHQGAHMARRGASKEKRRSDSF*IQERSL
Trigger: CAAACTCCTCTCCTGGATCAAAAATGAATCACTTCT...TCTCTTCTCTTTGGAAGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp AAGAGAGAAACAGTGAACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCTGGAGCATGATGACCTaGTACTCGTCGGCACCCTCG +
Preference number: 5 (lower is better)
Translates to: KRETVNSSANVHYPLLTGWSMMT*YSSAPS
Trigger: CGAGGGTGCCGACGAGTACAAGGTCATCATGCTCCA...GCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTTCACTGTTTCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp TGTGTGCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGTTAACCTTGATCACCTaGAAGCTCAGGAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CVRCCVHSKGCGAWRTSTLTLIT*KLRKLL
Trigger: CAGAAGCTTCCTGAGCTTCAAGGTGATCAAGGTTAA...CGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAACATCGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGATTAACCTTGATCACCTaGAAGCTCAGGAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRLTLIT*KLRKLL
Trigger: CAGAAGCTTCCTGAGCTTCAAGGTGATCAAGGTTAA...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACACTGTGCTGGCGGGCATaGCAATCCTTCCGCATCCTT +
Preference number: 5 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTLCWRA*QSFRIL
Trigger: AAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAG...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTGGGCCCATCACGATGTaGACGCTGCTGGATGACTGG +
Preference number: 5 (lower is better)
Translates to: LNASAQLMVSDVLLFISFGPITM*TLLDDW
Trigger: CCAGTCATCCAGCAGCGTCAACATCGTGATGGGCCC...AAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp AGGCCATTGTATTCTGGGGGCATGTGGTCCCTACGACAATTGTCCATTTTGGAGGGATCGCGGTATTGGTaGGTTGTGGTGATTTGGGGA +
Preference number: 5 (lower is better)
Translates to: RPLYSGGMWSLRQLSILEGSRYW*VVVIWG
Trigger: TCCCCAAATCACCACAACCAACCAATACCGCGATCC...CTCCAAAATGGACAATTGTCGTAGGGACCACATGCCCCCAGAATACAATGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS TCA 90 bp CTCCCCCACGGCTGGAAAGAAACGTCTGTTTCTAGTAAGTCATACTaGGACAAAGACAGGTGGGGCAACTTCTTCAAGGGTCCCTTATCC +
Preference number: 5 (lower is better)
Translates to: LPHGWKETSVSSKSY*DKDRWGNFFKGPLS
Trigger: GGATAAGGGACCCTTGAAGAAGTTGCCCCACCTGTCTTTGTCTCAGTATGACTTACTAGAAACAGACGTTTCTTTCCAGCCGTGGGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCACCTTCCACCCCACGTTaGAAGCTGGAGCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: THILTYPGFSQNTGDMTAPSTPR*KLELLF
Trigger: GAAGAGCAGCTCCAGCTTCAAACGTGGGGTGGAAGG...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCAATGCAGGTGGGAGGTGTTATGTGTTCACCTTaGGCCTCCTTGTCTTTATTT +
Preference number: 5 (lower is better)
Translates to: WLVVVIWGARGRAMQVGGVMCSP*ASLSLF
Trigger: AAATAAAGACAAGGAGGCCAAAGGTGAACACATAAC...ACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp CCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGATCCTTTCCTTTACCATaGATGAGAGTTTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: PHGSRYWLVVVIWGARGRSFPLP*MRVSVA
Trigger: TGCCACAGAAACTCTCATCAATGGTAAAGGAAAGGA...TCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCCTGGATGCCGTCATCTaGGAAGTATTAATGGATTCT +
Preference number: 5 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESLDAVI*EVLMDS
Trigger: AGAATCCATTAATACTTCCAAGATGACGGCATCCAG...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCAGACTTTAATCCACTaGCCAGGGAAAATGATAAAT +
Preference number: 5 (lower is better)
Translates to: VCTVRVAGLGEQARVPVKQTLIH*PGKMIN
Trigger: ATTTATCATTTTCCCTGGCAAGTGGATTAAAGTCTG...CTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACAGGAGGGTGCCTGGCTTaGGCCCCTGTATCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: GILTFHGQFSPNGSKSLTGGCLA*APVSRS
Trigger: GCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCC...TGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CAA 90 bp CGCTCCGGGCCACACTGTAAACAGCCGAGGTTATCCCAGACACAGCAGAACCACAAACAGCATGTCAATTaGCTCCAAAAGATAAGTGCA +
Preference number: 5 (lower is better)
Translates to: RSGPHCKQPRLSQTQQNHKQHVN*LQKISA
Trigger: TGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT...GTGGTTCTGCTGTGTCTGGGATAACCTCGGCTGTTTACAGTGTGGCCCGGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp CACAACGTAACTGGGAGGGTGCCTGGCTTTGGCCCCTGTATCAAGAAGCAAAATAGGAAACAGCCTGCATaGGATGAAGGACATGAGTAC +
Preference number: 5 (lower is better)
Translates to: HNVTGRVPGFGPCIKKQNRKQPA*DEGHEY
Trigger: GTACTCATGTCCTTCATCCAATGCAGGCTGTTTCCT...ATTTTGCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTTACGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTCTGCCGCGCTCCGGATaGCGGTTGCGAAGAAATATA +
Preference number: 5 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGLPRSG*RLRRNI
Trigger: TATATTTCTTCGCAACCGCAATCCGGAGCGCGGCAG...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCTTTTCATCAGGGCATTaGTTTCATGGCTCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESFSSGH*FHGSVE
Trigger: CTCAACAGAGCCATGAAACAAATGCCCTGATGAAAA...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GGAAAGCCCATAAATCTCCCCTTCCATGAAAGGTGGCACCCATGGCTGCAATCCTATCTGCTCTGTATCTaGTCTGCTTTCAAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GKPINLPFHERWHPWLQSYLLCI*SAFKSS
Trigger: GCTGCTCTTGAAAGCAGACAAGATACAGAGCAGATA...GGATTGCAGCCATGGGTGCCACCTTTCATGGAAGGGGAGATTTATGGGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp CAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAAGCTTTGGCCCGTGTATaGGTGAGGCGGGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: QHVNLLQKISAESVDLREALARV*VRRGQA
Trigger: AGCCTGACCCCGCCTCACCAATACACGGGCCAAAGC...TTCCCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517808.1
CDS-3UTR CAA 90 bp CAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAAGGAGGGTGCCTGGCTTaGGCCCGTGTATTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: QHVNLLQKISAESVDLREGGCLA*ARVLVR
Trigger: CCTCACCAATACACGGGCCAAAGCCAGGCACCCTCC...TTCCCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517808.1
CDS TCA 90 bp CTGCTGGCAGTAGGTTCCTGGCCGAGCACAAACATGAAGGAAGTTTaGAGAGAAGGCATGCTAGAATGTTTGCTTCAACGGATTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LLAVGSWPSTNMKEV*REGMLECLLQRISP
Trigger: TGGGGAAATCCGTTGAAGCAAACATTCTAGCATGCCTTCTCTTCAAACTTCCTTCATGTTTGTGCTCGGCCAGGAACCTACTGCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522067.1
CDS-3UTR CAA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGCAGTGGGTCTCCGGGTaGAGAAGTATCGATGAGAGT +
Preference number: 5 (lower is better)
Translates to: CICPADGIRRAAVHFFFMQWVSG*RSIDES
Trigger: ACTCTCATCGATACTTCTCAACCCGGAGACCCACTG...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCGGTCAGATTTGGAAGTaGGCATTGTTTTCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESGQIWK*ALFSLY
Trigger: ATACAGAGAAAACAATGCCAACTTCCAAATCTGACC...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGATCTTTGCAAAAGCCTaGGCTCAAGGTCAGAAATCC +
Preference number: 5 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLIFAKA*AQGQKS
Trigger: GGATTTCTGACCTTGAGCCAAGGCTTTTGCAAAGAT...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp AAGCCATCTGCCAAGGAGCCACATATGTCAGGACGAACTGTAACTTGTGAAGCAAGCAGGTCCCCGAGCTaGCTAAATAAAATGGACACC +
Preference number: 5 (lower is better)
Translates to: KPSAKEPHMSGRTVTCEASRSPS*LNKMDT
Trigger: GGTGTCCATTTTATTTAGCAAGCTCGGGGACCTGCT...TGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS-3UTR CAA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGCAGCTCTTCCTTGTaGGACAGCACTGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: CNMQLSYFHQGICFMALLSSSSL*DSTAPR
Trigger: GCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCT...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GGAAAGCCCATAAATCTCCCCTTCCATGAAAGGTGGCACCCATGGCTGCAATCCCATTCTTTGTTAACCTaGATCACCTTGAAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GKPINLPFHERWHPWLQSHSLLT*ITLKLR
Trigger: CCTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATG...GGATTGCAGCCATGGGTGCCACCTTTCATGGAAGGGGAGATTTATGGGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp AAGAGAGAAACAGTGAACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCCGCTCCGGATTGCGGTaGCGAAGAAATATAAGCTCC +
Preference number: 5 (lower is better)
Translates to: KRETVNSSANVHYPLLTGRSGLR*RRNISS
Trigger: GGAGCTTATATTTCTTCGCAACCGCAATCCGGAGCG...GCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTTCACTGTTTCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp GGCCCAAAGTCCTCGGACGCATTCTTTGTTAACCTTGATCACCTTGAAGCTCAGTCATGGATCGCGGTATaGGTTGGTTGTGGTGATTTG +
Preference number: 5 (lower is better)
Translates to: GPKSSDAFFVNLDHLEAQSWIAV*VGCGDL
Trigger: CAAATCACCACAACCAACCAATACCGCGATCCATGA...CTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462233.5
CDS-3UTR CAA 90 bp CCAAACCTGACCCATTTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTCTGCAACTCTGGTGCTaGATGGAAAGCATGAGCCAT +
Preference number: 5 (lower is better)
Translates to: PNLTHFCLDTIDFPCLPGLQLWC*MESMSH
Trigger: ATGGCTCATGCTTTCCATCAAGCACCAGAGTTGCAG...ACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAAATGGGTCAGGTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp CACAACGTAACTGGGAGGGTGCCTGGCTTTGGCCCCTGTATCAAGAAGCAAAATCAAGACAGAACTATCTaGTTGGGAAGTTACCCTGTA +
Preference number: 5 (lower is better)
Translates to: HNVTGRVPGFGPCIKKQNQDRTI*LGSYPV
Trigger: TACAGGGTAACTTCCCAACAAGATAGTTCTGTCTTG...ATTTTGCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTTACGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp GTCCGCAACAGCTTCATGCCAGCAATGATCATCAGAAAAATGTCCCAGTGGGTAAGGCCCACTGATGACTaGCAAGACAGAACTATCTTG +
Preference number: 5 (lower is better)
Translates to: VRNSFMPAMIIRKMSQWVRPTDD*QDRTIL
Trigger: CAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCCT...TACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp GTGACTCCGCGGTGGATTTCCATGCACCGAATGGACTCAGTTTCTAAACTCACAGCCAGTACATTCTCCTaGATGTCTTCAGTTCGATCA +
Preference number: 5 (lower is better)
Translates to: VTPRWISMHRMDSVSKLTASTFS*MSSVRS
Trigger: TGATCGAACTGAAGACATCAAGGAGAATGTACTGGC...TGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGGGGAGCACGAGGGAGAGCATCTCTCACTTCCCGTaGATGATACTCTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: SWIAVLVGCGDLGSTRESISHFP*MILFVF
Trigger: AAAAACAAAGAGTATCATCAACGGGAAGTGAGAGAT...GCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS-3UTR CAA 90 bp TATCTTTTAAGGCTAAGTGGCCTAAAGGGATCCAAAGTGCCTCTTCATGTCCCCAGCAGGTCCCCGAGCTaGCTAAATAAAATGGACACC +
Preference number: 5 (lower is better)
Translates to: YLLRLSGLKGSKVPLHVPSRSPS*LNKMDT
Trigger: GGTGTCCATTTTATTTAGCAAGCTCGGGGACCTGCT...GGGGACATGAAGAGGCACTTTGGATCCCTTTAGGCCACTTAGCCTTAAAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR CAA 90 bp ATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGTTGTGTGAGCAGCTCTTCCTaGTTGGACAGCACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: MQLSYFHQGICFMALLSCVSSSS*LDSTAP
Trigger: GGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCAC...ACAACTCAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TTCCACAGGAGGAGTCCCTCATGGATCGCGGTATTGGTTGGTTGTGGTGATTTGCATTCTTTGTTAACCTaGATCACCTTGAAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: FHRRSPSWIAVLVGCGDLHSLLT*ITLKLR
Trigger: CCTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATG...CAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS-3UTR CAA 90 bp AACAGCTCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTCCACTAGAACCAGCTTaGAACCTATTCCATCATGTA +
Preference number: 5 (lower is better)
Translates to: NSSANVHYPLLTGITPIRPLEPA*NLFHHV
Trigger: TACATGATGGAATAGGTTCAAAGCTGGTTCTAGTGG...ACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGAGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS TCA 90 bp CGGAGAAGCCCACTTTCTTCATTCTGCTCAGCTGAGCCATTCAGTTaGCTGGATGCCGTCATCTTGGAAGTATTAATGGATTCTAACAGG +
Preference number: 5 (lower is better)
Translates to: RRSPLSSFCSAEPFS*LDAVILEVLMDSNR
Trigger: CCTGTTAGAATCCATTAATACTTCCAAGATGACGGCATCCAGTCAACTGAATGGCTCAGCTGAGCAGAATGAAGAAAGTGGGCTTCTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000430153.5
ENST00000475463.6
CDS TCA 90 bp TTTGAAATCAGTCATGTTCTTTCCAGATCCCTGAGACCCAAGAGCTaGGTCAATGAACTGAGGAGGTCATCAAGAGAGACAGGTTTGGCC +
Preference number: 5 (lower is better)
Translates to: FEISHVLSRSLRPKS*VNELRRSSRETGLA
Trigger: GGCCAAACCTGTCTCTCTTGATGACCTCCTCAGTTCATTGACTCAGCTCTTGGGTCTCAGGGATCTGGAAAGAACATGACTGATTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484041.5
CDS CCA 90 bp GAGTTTCTGTGGCAACTGGTTTTACAGGTATTACTGACTTGGTCGTaGTTTCCAGCATGTGTGCTTGAGACGCAGGTAAGCTTTCCACTT +
Preference number: 5 (lower is better)
Translates to: EFLWQLVLQVLLTWS*FPACVLETQVSFPL
Trigger: AAGTGGAAAGCTTACCTGCGTCTCAAGCACACATGCTGGAAACCACGACCAAGTCAGTAATACCTGTAAAACCAGTTGCCACAGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGAGGCCCACTGATGACTaGCAAGACAGAACTATCTTG +
Preference number: 5 (lower is better)
Translates to: CICPADGIRRAAVHFFFMRPTDD*QDRTIL
Trigger: CAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCCT...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATAATGGTTGTGTCCGTGTATaGGTGAGGCGGGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: FHGQFSPNGSKSLTYMYNGCVRV*VRRGQA
Trigger: AGCCTGACCCCGCCTCACCAATACACGGACACAACC...ATTATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CAA 90 bp CACAACGTAACTGGGAGGGTGCCTGGCTTTGGCCCCTGTATCAAGAAGCAAAATTATGTTATGATTTGGTaGTGTCCGTGTATTGGTGAG +
Preference number: 5 (lower is better)
Translates to: HNVTGRVPGFGPCIKKQNYVMIW*CPCIGE
Trigger: CTCACCAATACACGGACACAACCAAATCATAACATA...ATTTTGCTTCTTGATACAGGGGCCAAAGCCAGGCACCCTCCCAGTTACGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp ACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATCAGTGCCGGGATGTGTaGCATGCTCCACGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: TFHGQFSPNGSKSLTYMYQCRDV*HAPRFL
Trigger: AAGGAACCGTGGAGCATGCAACACATCCCGGCACTG...ATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CAA 90 bp TCAGCAAACGTTCACTACCCACTTCTAACTGGCATCACCCCCATCCGTGCTGTGAAAATGGAATTGAGATaGTTGTCATCATTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: SANVHYPLLTGITPIRAVKMELR*LSSFPG
Trigger: TCCAGGGAATGATGACAACAATCTCAATTCCATTTT...CACAGCACGGATGGGGGTGATGCCAGTTAGAAGTGGGTAGTGAACGTTTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp TTTTGCCTTGACACCATCGATTTTCCCTGTCTACCAGGTCACATAGGAGCACTGTTAACCTTGATCACCTaGAAGCTCAGGAAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: FCLDTIDFPCLPGHIGALLTLIT*KLRKLL
Trigger: CAGAAGCTTCCTGAGCTTCAAGGTGATCAAGGTTAA...CAGTGCTCCTATGTGACCTGGTAGACAGGGAAAATCGATGGTGTCAAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp ACTGCGCAGACGATGAGATCCCATTTTAAGACATCCGTCACTGAATCTTTCATCGCCAGTACATTCTCCTaGATGTCTTCAGTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: TAQTMRSHFKTSVTESFIASTFS*MSSVPW
Trigger: CCACGGAACTGAAGACATCAAGGAGAATGTACTGGC...GATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS TCA 90 bp TTTACAGGTATTACTGACTTGGTCGTGGTTTCCAGCATGTGTGCTTaGGACGCAGGTAAGCTTTCCACTTTGATACCAGGTGAGGTAGAT +
Preference number: 5 (lower is better)
Translates to: FTGITDLVVVSSMCA*DAGKLSTLIPGEVD
Trigger: ATCTACCTCACCTGGTATCAAAGTGGAAAGCTTACCTGCGTCTCAAGCACACATGCTGGAAACCACGACCAAGTCAGTAATACCTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp ACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGACAGGTATTACTGACTaGGTCGTGGTTTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: TLRFNLNASAQLMVSDVLTGITD*VVVSSM
Trigger: CATGCTGGAAACCACGACCAAGTCAGTAATACCTGT...CAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp ACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCAACTGCCAGTCTTGTGTaGGAATTATCCACTCGCCTT +
Preference number: 5 (lower is better)
Translates to: THILTYPGFSQNTGDMTATASLV*ELSTRL
Trigger: AAGGCGAGTGGATAATTCCAACACAAGACTGGCAGT...TGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACATTTGGACTGCCAGTCTaGTGTTGGAATTATCCACTC +
Preference number: 5 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTFGLPV*CWNYPL
Trigger: GAGTGGATAATTCCAACACAAGACTGGCAGTCCAAA...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS TCA 90 bp ATAACAATTTTTATGGGCTCATGTAGACTCAGTGGGTCTCCGGGTTaGGAAGTATCGATGAGAGTAACAGCTACCTCACTATCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: ITIFMGSCRLSGSPG*EVSMRVTATSLSEE
Trigger: CTCCTCAGATAGTGAGGTAGCTGTTACTCTCATCGATACTTCTCAACCCGGAGACCCACTGAGTCTACATGAGCCCATAAAAATTGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS TCA 90 bp GCCACTTGGCAAAGGGCTGCAGGGACTTCAGAAGTGATTCATTTTTaGTCCAGGAGAGGAGTTTGGGAGACGTTACCATATAGTATATTA +
Preference number: 5 (lower is better)
Translates to: ATWQRAAGTSEVIHF*SRRGVWETLPYSIL
Trigger: TAATATACTATATGGTAACGTCTCCCAAACTCCTCTCCTGGATCAAAAATGAATCACTTCTGAAGTCCCTGCAGCCCTTTGCCAAGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS TCA 90 bp CCTGCTTTCAAGAGTGGGGTATACTCTTATAGACCTTTCTTAGGTTaGACCATGAGAATGAAAGCTCTCGGATCATCTGCAGCCATGGTA +
Preference number: 5 (lower is better)
Translates to: PAFKSGVYSYRPFLG*TMRMKALGSSAAMV
Trigger: TACCATGGCTGCAGATGATCCGAGAGCTTTCATTCTCATGGTTCAACCTAAGAAAGGTCTATAAGAGTATACCCCACTCTTGAAAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGACAGAACTATCTTGTaGGGAAGTTACCCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTDRTIL*GSYPVD
Trigger: ATCTACAGGGTAACTTCCCAACAAGATAGTTCTGTC...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp ACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATGCAGAAAGTGTTGATTaGCGGGAAGAGCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: TFHGQFSPNGSKSLTYMYAESVD*REEPKE
Trigger: CTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTGC...ATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CAA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGCAGAAAGTGTTGATTaGCGGGAAGAGCCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: KQHVNLLQKISAESVDLRAESVD*REEPKE
Trigger: CTCCTTGGGCTCTTCCCGCAAATCAACACTTTCTGC...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000517808.1
CDS-3UTR CAA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGGAAACAGCCTGCATaGGATGAAGGACATGAGTAC +
Preference number: 5 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVARKQPA*DEGHEY
Trigger: GTACTCATGTCCTTCATCCAATGCAGGCTGTTTCCT...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS TCA 90 bp CAGAACTTGAGAACAGTGTCCACAAAGGTATCTTTCTCTTCAAATTaGTTTCAGGAAATGGTGGTGAGTAGTCAACGTCTCCACCACCTG +
Preference number: 5 (lower is better)
Translates to: QNLRTVSTKVSFSSN*FQEMVVSSQRLHHL
Trigger: CAGGTGGTGGAGACGTTGACTACTCACCACCATTTCCTGAAATCAATTTGAAGAGAAAGATACCTTTGTGGACACTGTTCTCAAGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CCA 90 bp AGTACAAGAAACACATGGAAGGGAGAGATGAGTAGCTCTCTGATTTaGAGAGAACGGTCTTGTGTCTTAATCAATTTGGAGCACCAGATC +
Preference number: 5 (lower is better)
Translates to: STRNTWKGEMSSSLI*RERSCVLINLEHQI
Trigger: GATCTGGTGCTCCAAATTGATTAAGACACAAGACCGTTCTCTCCAAATCAGAGAGCTACTCATCTCTCCCTTCCATGTGTTTCTTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTACAAATTCCAGGAAGTaGGACTCATTTGGCATTTGT +
Preference number: 5 (lower is better)
Translates to: MHDHGSCCEAATMLRLTATNSRK*DSFGIC
Trigger: ACAAATGCCAAATGAGTCCAACTTCCTGGAATTTGT...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp GTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGATCACGGTAGTATGGTCTTGACTTaGCAAATCTGGTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: VSWLFTEYWRHDCMHDHGSMVLT*QIWFSL
Trigger: CAAGGAAAACCAGATTTGCAAAGTCAAGACCATACT...ACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGCCCAGAAGACGGATCTaGACTCTCAGAAGTTGTGGT +
Preference number: 5 (lower is better)
Translates to: KQHVNLLQKISAESVDLRPRRRI*TLRSCG
Trigger: ACCACAACTTCTGAGAGTCAAGATCCGTCTTCTGGG...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACATATGTTATGATTTGGTaGTGTCCGTGTATTGGTGAG +
Preference number: 5 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTYVMIW*CPCIGE
Trigger: CTCACCAATACACGGACACAACCAAATCATAACATA...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGGAATCTTTCATCTTCTaGGGGAGAGGGTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: KQHVNLLQKISAESVDLRESFIF*GRGSAA
Trigger: AGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTC...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp ACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATGAATCTTTCATCTTCTaGGGGAGAGGGTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TFHGQFSPNGSKSLTYMYESFIF*GRGSAA
Trigger: AGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTC...ATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CAA 90 bp TGCATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAAGAAGTGATTCATTTTaGATCCAGGAGAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: CMHDHGSCCEAATMLRLTRSDSF*IQERSL
Trigger: CAAACTCCTCTCCTGGATCAAAAATGAATCACTTCT...TGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTTCATCAATGTTAATGTaGAACATTGCAAGGTCACGC +
Preference number: 5 (lower is better)
Translates to: MHDHGSCCEAATMLRLTASSMLM*NIARSR
Trigger: GCGTGACCTTGCAATGTTCAACATTAACATTGATGA...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS TCA 90 bp ATGCTATATCTGCCAATTCCGGATCAGGGCAGAGGGAAGGTCCAATaGGATTTATTAATTGCCTTTCCAAATGCTGTATGTGTATGTGAC +
Preference number: 5 (lower is better)
Translates to: MLYLPIPDQGRGKVQ*DLLIAFPNAVCVCD
Trigger: GTCACATACACATACAGCATTTGGAAAGGCAATTAATAAATCTCATTGGACCTTCCCTCTGCCCTGATCCGGAATTGGCAGATATAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS TCA 90 bp TATATTACTAACCTCTCACTTCCCGTTGATGATACTCTTTGTTTTTaGGAATGGGGTGTGAAATCCACATCCAGGGATGATGCTTGCGGA +
Preference number: 5 (lower is better)
Translates to: YITNLSLPVDDTLCF*EWGVKSTSRDDACG
Trigger: TCCGCAAGCATCATCCCTGGATGTGGATTTCACACCCCATTCTCAAAAACAAAGAGTATCATCAACGGGAAGTGAGAGGTTAGTAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498302.1
CDS-3UTR CAA 90 bp TGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTTTCATGAATAGAATGACACCTTaGAGATCTTCTACAGTTTCC +
Preference number: 5 (lower is better)
Translates to: CICPADGIRRAAVHFFFMNRMTP*RSSTVS
Trigger: GGAAACTGTAGAAGATCTCAAAGGTGTCATTCTATT...CATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TGTAACATGCAGTTGTCTTATTTTCATCAGGGCATTTGTTTCATGGCTCTGTTGAGGAAACAGCCTGCATaGGATGAAGGACATGAGTAC +
Preference number: 5 (lower is better)
Translates to: CNMQLSYFHQGICFMALLRKQPA*DEGHEY
Trigger: GTACTCATGTCCTTCATCCAATGCAGGCTGTTTCCT...CAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp AAATACCTAAAAGCAGTGGGCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCTGGATCTCTTTCAATTaGGACTGCCAGTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: KYLKAVGHLSSFKVKSIGWISFN*DCQSCV
Trigger: AACACAAGACTGGCAGTCCAAATTGAAAGAGATCCA...GCCAATCGATTTGACTTTAAAGCTGCTGAGATGGCCCACTGCTTTTAGGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp ATGCATGATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTAAAATGGAATTGAGATaGTTGTCATCATTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: MHDHGSCCEAATMLRLTAKMELR*LSSFPG
Trigger: TCCAGGGAATGATGACAACAATCTCAATTCCATTTT...AGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS GCA 90 bp CTCATCTGTCAGGTTGCAGTGAACGTGAAGGAAAAAGCAGCCAAATaGTTGTTATGTTACCAGGACTTCAGGAAAATGACACTTGAAATT +
Preference number: 5 (lower is better)
Translates to: LICQVAVNVKEKAAK*LLCYQDFRKMTLEI
Trigger: AATTTCAAGTGTCATTTTCCTGAAGTCCTGGTAACATAACAAGCATTTGGCTGCTTTTTCCTTCACGTTCACTGCAACCTGACAGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS-3UTR CAA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGATCTTTGCAAAAGCCTaGGCTCAAGGTCAGAAATCC +
Preference number: 5 (lower is better)
Translates to: KQHVNLLQKISAESVDLRIFAKA*AQGQKS
Trigger: GGATTTCTGACCTTGAGCCAAGGCTTTTGCAAAGAT...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp AAATACCTAAAAGCAGTGGGCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCTGTGTCTTAATCAATTaGGAGCACCAGATCTGCAAA +
Preference number: 5 (lower is better)
Translates to: KYLKAVGHLSSFKVKSIGCVLIN*EHQICK
Trigger: TTTGCAGATCTGGTGCTCCAAATTGATTAAGACACA...GCCAATCGATTTGACTTTAAAGCTGCTGAGATGGCCCACTGCTTTTAGGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp AAATACCTAAAAGCAGTGGGCCATCTCAGCAGCTTTAAAGTCAAATCGATTGGCCAAGTAACAGCTTATTaGGGTGAAGTCCTTAGAACT +
Preference number: 5 (lower is better)
Translates to: KYLKAVGHLSSFKVKSIGQVTAY*GEVLRT
Trigger: AGTTCTAAGGACTTCACCCAAATAAGCTGTTACTTG...GCCAATCGATTTGACTTTAAAGCTGCTGAGATGGCCCACTGCTTTTAGGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS-3UTR CAA 90 bp GCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAGCTAATTCACTTGCCTaGCTAAATAAAATGGACACC +
Preference number: 5 (lower is better)
Translates to: ANNMAYLHSMGSFPQMVAANSLA*LNKMDT
Trigger: GGTGTCCATTTTATTTAGCAAGGCAAGTGAATTAGC...TGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CAA 90 bp GGAGTTGGTGTATTTTTCCTTATTCCTCTACTTGGTACAACGAAAACCCTGGATAGTATGGTCTTGACTTaGCAAATCTGGTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GVGVFFLIPLLGTTKTLDSMVLT*QIWFSL
Trigger: CAAGGAAAACCAGATTTGCAAAGTCAAGACCATACT...ATCCAGGGTTTTCGTTGTACCAAGTAGAGGAATAAGGAAAAATACACCAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp GGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACAAAACAGCATGTCAATTaGCTCCAAAAGATAAGTGCA +
Preference number: 5 (lower is better)
Translates to: GILTFHGQFSPNGSKSLTKQHVN*LQKISA
Trigger: TGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT...TGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CAA 90 bp GAAAAATGTCCCAGTGGGTACCAAGTCTCCGGTGATTGCTTATTAAAAATGCATTCTCTGTTTTTATTTTaGCCTCACGTAGCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: EKCPSGYQVSGDCLLKMHSLFLF*PHVAQK
Trigger: TTTCTGGGCTACGTGAGGCAAAAATAAAAACAGAGA...ATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS GCA 90 bp AGATTTGGAAGTTGGCATTGTTTTCTCTGTATCGTTAACAATTTCTaGAGAACTTTTACTCAAGAAGACATCTGTCCCACTGTCCACACT +
Preference number: 5 (lower is better)
Translates to: RFGSWHCFLCIVNNF*RTFTQEDICPTVHT
Trigger: AGTGTGGACAGTGGGACAGATGTCTTCTTGAGTAAAAGTTCTGCAGAAATTGTTAACGATACAGAGAAAACAATGCCAACTTCCAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS-3UTR CAA 90 bp TTAGCAAATAACATGGCATACTTACATTCCATGGGCAGTTTTCCCCAAATGGTATATGTTATGATTTGGTaGTGTCCGTGTATTGGTGAG +
Preference number: 5 (lower is better)
Translates to: LANNMAYLHSMGSFPQMVYVMIW*CPCIGE
Trigger: CTCACCAATACACGGACACAACCAAATCATAACATA...TACCATTTGGGGAAAACTGCCCATGGAATGTAAGTATGCCATGTTATTTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS-3UTR CAA 90 bp TCATTTAAGCAGTTTAAAAGACAGGGTACCTTAATGCAGATCTGGGCATGGGAATTTATTTGCACTATTTaGCACAAGGCAACCCAATCA +
Preference number: 5 (lower is better)
Translates to: SFKQFKRQGTLMQIWAWEFICTI*HKATQS
Trigger: TGATTGGGTTGCCTTGTGCAAAATAGTGCAAATAAA...TTCCCATGCCCAGATCTGCATTAAGGTACCCTGTCTTTTAAACTGCTTAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484347.5
CDS-3UTR CAA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGAAACAGCATGTCAATTaGCTCCAAAAGATAAGTGCA +
Preference number: 5 (lower is better)
Translates to: KQHVNLLQKISAESVDLRKQHVN*LQKISA
Trigger: TGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475463.6
ENST00000517808.1
CDS-3UTR CAA 90 bp AAACAGCATGTCAATTTGCTCCAAAAGATAAGTGCAGAAAGTGTTGATTTGCGGATCTCTCACTTCCCGTaGATGATACTCTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: KQHVNLLQKISAESVDLRISHFP*MILFVF
Trigger: AAAAACAAAGAGTATCATCAACGGGAAGTGAGAGAT...CCGCAAATCAACACTTTCTGCACTTATCTTTTGGAGCAAATTGACATGCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475463.6
CDS-3UTR CAA 90 bp ACATTCCATGGGCAGTTTTCCCCAAATGGTAGCAAGAGTTTAACATACATGTATATCTCTCACTTCCCGTaGATGATACTCTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: TFHGQFSPNGSKSLTYMYISHFP*MILFVF
Trigger: AAAAACAAAGAGTATCATCAACGGGAAGTGAGAGAT...ATACATGTATGTTAAACTCTTGCTACCATTTGGGGAAAACTGCCCATGGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488780.6
CDS GCA 72 bp GCCCGTGCCACCATCCCAGCCTGTCCTGGTGAGCCCTaGCCAGCCCCTTACCCGAGTGGCCTGGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: ARATIPACPGEP*PAPYPSGLAGS
Trigger: GCTGCCAGCCAGGCCACTCGGGTAAGGGGCTGGGCAGGGCTCACCAGGACAGGCTGGGATGGTGGCACGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CCA 72 bp CTGGTGAGCCCTGCCCAGCCCCTTACCCGAGTGGCCTaGCTGGCAGCCCTGGCTGAGGGGCCCATCACGATG +
Preference number: 6 (lower is better)
Translates to: LVSPAQPLTRVA*LAALAEGPITM
Trigger: CATCGTGATGGGCCCCTCAGCCAGGGCTGCCAGCCAGGCCACTCGGGTAAGGGGCTGGGCAGGGCTCACCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS GCA 72 bp GAGGGCAGCTGCTGCTCAGGCTGTCCTGAGGTGACTTaGTTTGTACCCGTTCCCTTATGGAGCCCCGGGGAC +
Preference number: 6 (lower is better)
Translates to: EGSCCSGCPEVT*FVPVPLWSPGD
Trigger: GTCCCCGGGGCTCCATAAGGGAACGGGTACAAAGCAAGTCACCTCAGGACAGCCTGAGCAGCAGCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS TCA 72 bp CCCACCCTCAGGCAGGTCCAGGGTGATTACAGGAATTaGGATCTGCTCGGCATTTGGAGAACCGGCCGCCCC +
Preference number: 6 (lower is better)
Translates to: PTLRQVQGDYRN*DLLGIWRTGRP
Trigger: GGGGCGGCCGGTTCTCCAAATGCCGAGCAGATCTCAATTCCTGTAATCACCCTGGACCTGCCTGAGGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS GCA 72 bp CCTGACTCACATGCCGTGGGGTTTCCGACTGGGTCCTaGGAGCCACCATCAGTAACAGCTGTTGCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: PDSHAVGFPTGS*EPPSVTAVAEG
Trigger: CCCTTCAGCAACAGCTGTTACTGATGGTGGCTCGCAGGACCCAGTCGGAAACCCCACGGCATGTGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000324142.4
CDS CCA 72 bp ATGTGTCTGCTGGCTCCTCCACAGGCTTGGCCACGATaGTGTCACATTGAGGGCAGCTGCTGCTCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: MCLLAPPQAWPR*CHIEGSCCSGC
Trigger: ACAGCCTGAGCAGCAGCTGCCCTCAATGTGACACCATCGTGGCCAAGCCTGTGGAGGAGCCAGCAGACACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 72 bp CGCCCTGCATGCCTCTCAGATCAGCTTCCCCGAGGGTaGGGTGCCTTTTCCAGCACTCTAAGGTACCATGTC +
Preference number: 6 (lower is better)
Translates to: RPACLSDQLPRG*GAFSSTLRYHV
Trigger: GACATGGTACCTTAGAGTGCTGGAAAAGGCACCCCACCCTCGGGGAAGCTGATCTGAGAGGCATGCAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467336.6
CDS TCA 72 bp AGGGCACTGACGGCAGGGTCCCCAGAAGACGGATCTTaGCTCTCAGAAGTTGTGGTACTGGAGGAGCTGACC +
Preference number: 6 (lower is better)
Translates to: RALTAGSPEDGS*LSEVVVLEELT
Trigger: GGTCAGCTCCTCCAGTACCACAACTTCTGAGAGTCAAGATCCGTCTTCTGGGGACCCTGCCGTCAGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS GCA 72 bp ACAACTCCAATGGCCCAGAAGAGTGATGAGAGGTTATaGTTTGCCCTCTGGAGCTGCAGCGGAGGGGAGGCG +
Preference number: 6 (lower is better)
Translates to: TTPMAQKSDERL*FALWSCSGGEA
Trigger: CGCCTCCCCTCCGCTGCAGCTCCAGAGGGCAAAGCATAACCTCTCATCACTCTTCTGGGCCATTGGAGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS GCA 72 bp GCTTGGCCACGATGGTGTCACATTGAGGGCAGCTGCTaGTCAGGCTGTCCTGAGGTGACTTGCTTTGTACCC +
Preference number: 6 (lower is better)
Translates to: AWPRWCHIEGSC*SGCPEVTCFVP
Trigger: GGGTACAAAGCAAGTCACCTCAGGACAGCCTGAGCAGCAGCTGCCCTCAATGTGACACCATCGTGGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 72 bp CTGGCAGGAGGTATCTACCTGACAGGATGTGTCTGCTaGCTCCTCCACAGGCTTGGCCACGATGGTGTCACA +
Preference number: 6 (lower is better)
Translates to: LAGGIYLTGCVC*LLHRLGHDGVT
Trigger: TGTGACACCATCGTGGCCAAGCCTGTGGAGGAGCCAGCAGACACATCCTGTCAGGTAGATACCTCCTGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CAA 72 bp CTCGTCTTCAGTCTCTCTGGAGTCCTTTCACTTCCATaGCCTTCGGGACAGGGAACACCTCCTCCCCCACCC +
Preference number: 6 (lower is better)
Translates to: LVFSLSGVLSLP*PSGQGTPPPPP
Trigger: GGGTGGGGGAGGAGGTGTTCCCTGTCCCGAAGGCAATGGAAGTGAAAGGACTCCAGAGAGACTGAAGACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CAA 90 bp CTGTTGCTGAAGGGCACTGACGGCAGGGTCCCCAGAAGACGGATCTaGACTCTCAGAAGTTGTGGTACTGGAGGAGCTGACCTGCATCTC +
Preference number: 6 (lower is better)
Translates to: LLLKGTDGRVPRRRI*TLRSCGTGGADLHL
Trigger: GAGATGCAGGTCAGCTCCTCCAGTACCACAACTTCTGAGAGTCAAGATCCGTCTTCTGGGGACCCTGCCGTCAGTGCCCTTCAGCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS GCA 72 bp TCAGGCAGGTCCAGGGTGATTACAGGAATTGAGATCTaGTCGGCATTTGGAGAACCGGCCGCCCCTGGGTTA +
Preference number: 6 (lower is better)
Translates to: SGRSRVITGIEI*SAFGEPAAPGL
Trigger: TAACCCAGGGGCGGCCGGTTCTCCAAATGCCGAGCAGATCTCAATTCCTGTAATCACCCTGGACCTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS GCA 72 bp GATGTCTTCAGTTCCGTGGGGTTTCCGACTGGGTCCTaGGAGCCACCATCAGTAACAGCTGTTGCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: DVFSSVGFPTGS*EPPSVTAVAEG
Trigger: CCCTTCAGCAACAGCTGTTACTGATGGTGGCTCGCAGGACCCAGTCGGAAACCCCACGGAACTGAAGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430153.5
ENST00000475463.6
CDS CCA 72 bp GTAACAGCTACCTCACTATCTGAGGAGTCCACTTCCTaGTGCAAGGGCAGGTCCCCCTGGCAGGAGGTATCT +
Preference number: 6 (lower is better)
Translates to: VTATSLSEESTS*CKGRSPWQEVS
Trigger: AGATACCTCCTGCCAGGGGGACCTGCCCTTGCACCAGGAAGTGGACTCCTCAGATAGTGAGGTAGCTGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CAA 72 bp AAGGGCACTGACGGCAGGGTCCCCAGAAGACGGATCTaGACTCTCAGAAGTTGTGGTACTGGAGGAGCTGAC +
Preference number: 6 (lower is better)
Translates to: KGTDGRVPRRRI*TLRSCGTGGAD
Trigger: GTCAGCTCCTCCAGTACCACAACTTCTGAGAGTCAAGATCCGTCTTCTGGGGACCCTGCCGTCAGTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS GCA 72 bp ACATCTGTCCCACTGTCCACACTGAGCACCCGGGCATaGCTCTTTTCATGGCTGGACTTACAAGACGATGGG +
Preference number: 6 (lower is better)
Translates to: TSVPLSTLSTRA*LFSWLDLQDDG
Trigger: CCCATCGTCTTGTAAGTCCAGCCATGAAAAGAGGCATGCCCGGGTGCTCAGTGTGGACAGTGGGACAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 72 bp CCCCCTCCCCAGATCCGTAGCCAGAACACTGATTGGTaGATACCCTCGTCTTCAGTCTCTCTGGAGTCCTTT +
Preference number: 6 (lower is better)
Translates to: PPPQIRSQNTDW*IPSSSVSLESF
Trigger: AAAGGACTCCAGAGAGACTGAAGACGAGGGTATCCACCAATCAGTGTTCTGGCTACGGATCTGGGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS GCA 72 bp AGGCCACAGAAGGCCGAAAACAGTGCCGGGATGTGTTaGATGCTCCACGGTTCCTGTAAAGCAAATTGCAGG +
Preference number: 6 (lower is better)
Translates to: RPQKAENSAGMC*MLHGSCKANCR
Trigger: CCTGCAATTTGCTTTACAGGAACCGTGGAGCATGCAACACATCCCGGCACTGTTTTCGGCCTTCTGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467336.6
CDS CAA 72 bp GAGCAGCTAAGCCACTTCGTGTCTAATCACTGTCCTTaGTCACTCTGGGAGCCCCATAGAGAAGGGGATGGG +
Preference number: 6 (lower is better)
Translates to: EQLSHFVSNHCP*SLWEPHREGDG
Trigger: CCCATCCCCTTCTCTATGGGGCTCCCAGAGTGACAAAGGACAGTGATTAGACACGAAGTGGCTTAGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CAA 90 bp GGCAGGCTGAGTGCATGCGGGGCCGGTGCTAGTATGGTCTTGACTTaGCAAATCTGGTTTTCCTTGCTTAGAACTGTGTCCACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: GRLSACGAGASMVLT*QIWFSLLRTVSTGL
Trigger: AAGCCCAGTGGACACAGTTCTAAGCAAGGAAAACCAGATTTGCAAAGTCAAGACCATACTAGCACCGGCCCCGCATGCACTCAGCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000430153.5
ENST00000475463.6
CDS TCA 72 bp TTTGTACCCGTTCCCTTATGGAGCCCCGGGGACAACTaGCAGGTTCTGGAATCAGGACTGAATTCTCACTCC +
Preference number: 6 (lower is better)
Translates to: FVPVPLWSPGDN*QVLESGLNSHS
Trigger: GGAGTGAGAATTCAGTCCTGATTCCAGAACCTGTCAGTTGTCCCCGGGGCTCCATAAGGGAACGGGTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS TCA 72 bp GCAACATTCGCAATGACAGGAATACAGTGCTGGCGCTaGCTGCAAATGAGAGGACAGCAACCACTGCGCAGA +
Preference number: 6 (lower is better)
Translates to: ATFAMTGIQCWR*LQMRGQQPLRR
Trigger: TCTGCGCAGTGGTTGCTGTCCTCTCATTTGCAGTCAGCGCCAGCACTGTATTCCTGTCATTGCGAATGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486012.5
CDS CCA 72 bp ACACTGATTGGTGGATACCCTCGTCTTCAGTCTCTCTaGAGTCCTTTCACTTCCATTGCCTTCGGGACAGGG +
Preference number: 6 (lower is better)
Translates to: TLIGGYPRLQSL*SPFTSIAFGTG
Trigger: CCCTGTCCCGAAGGCAATGGAAGTGAAAGGACTCCAGAGAGACTGAAGACGAGGGTATCCACCAATCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 72 bp GGCATGCCTCTTTTCATGGCTGGACTTACAAGACGATaGGTCAAGGTTAGTCTGGCCTTCCTTCCCCACCTT +
Preference number: 6 (lower is better)
Translates to: GMPLFMAGLTRR*VKVSLAFLPHL
Trigger: AAGGTGGGGAAGGAAGGCCAGACTAACCTTGACCCATCGTCTTGTAAGTCCAGCCATGAAAAGAGGCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CAA 90 bp GGTCTTGGCAGGCTGAGTGCATGCGGGGCCGGTGCTAGTATGGTCTaGACTTTGCAAATCTGGTTTTCCTTGCTTAGAACTGTGTCCACT +
Preference number: 6 (lower is better)
Translates to: GLGRLSACGAGASMV*TLQIWFSLLRTVST
Trigger: AGTGGACACAGTTCTAAGCAAGGAAAACCAGATTTGCAAAGTCAAGACCATACTAGCACCGGCCCCGCATGCACTCAGCCTGCCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000430153.5
ENST00000475463.6
CDS TCA 72 bp TTTTACTCAAGAAGACATCTGTCCCACTGTCCACACTaGGCACCCGGGCATGCCTCTTTTCATGGCTGGACT +
Preference number: 6 (lower is better)
Translates to: FYSRRHLSHCPH*APGHASFHGWT
Trigger: AGTCCAGCCATGAAAAGAGGCATGCCCGGGTGCTCAGTGTGGACAGTGGGACAGATGTCTTCTTGAGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS TCA 72 bp GATCTTGACTCTCAGAAGTTGTGGTACTGGAGGAGCTaGCCTGCATCTCTCGAGCCTGAGAGAGACAGTCAT +
Preference number: 6 (lower is better)
Translates to: DLDSQKLWYWRS*PASLEPERDSH
Trigger: ATGACTGTCTCTCTCAGGCTCGAGAGATGCAGGTCAGCTCCTCCAGTACCACAACTTCTGAGAGTCAAGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS GCA 72 bp CACACATCCCCAAAACCCTTTGTAAGTGCAGCGATCTaGTCTCTTGGAGAGGCTATGCCAGCCTACCTTTGT +
Preference number: 6 (lower is better)
Translates to: HTSPKPFVSAAI*SLGEAMPAYLC
Trigger: ACAAAGGTAGGCTGGCATAGCCTCTCCAAGAGAGCAGATCGCTGCACTTACAAAGGGTTTTGGGGATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CAA 72 bp AGTGCATGCGGGGCCGGTGCTAGTATGGTCTTGACTTaGCAAATCTGGTTTTCCTTGCTTAGAACTGTGTCC +
Preference number: 6 (lower is better)
Translates to: SACGAGASMVLT*QIWFSLLRTVS
Trigger: GGACACAGTTCTAAGCAAGGAAAACCAGATTTGCAAAGTCAAGACCATACTAGCACCGGCCCCGCATGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000430153.5
ENST00000475463.6
CDS GCA 72 bp CAATACAGGAAGAACAGCAGTCAACAAGGAGGTCCATaGACTAGATCCTCTCCAAAACATCCTGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: QYRKNSSQQGGP*TRSSPKHPGGG
Trigger: TCCTCCTCCAGGATGTTTTGGAGAGGATCTAGTGCATGGACCTCCTTGTTGACTGCTGTTCTTCCTGTATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS CCA 72 bp TGGCAACTGGTTTTACAGGTATTACTGACTTGGTCGTaGTTTCCAGCATGTGTGCTTGAGACGCAGGTAAGC +
Preference number: 6 (lower is better)
Translates to: WQLVLQVLLTWS*FPACVLETQVS
Trigger: GCTTACCTGCGTCTCAAGCACACATGCTGGAAACCACGACCAAGTCAGTAATACCTGTAAAACCAGTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 72 bp CCCAAAACCCTTTGTAAGTGCAGCGATCTGCTCTCTTaGAGAGGCTATGCCAGCCTACCTTTGTCCTTTTAT +
Preference number: 6 (lower is better)
Translates to: PKTLCKCSDLLS*RGYASLPLSFY
Trigger: ATAAAAGGACAAAGGTAGGCTGGCATAGCCTCTCCAAGAGAGCAGATCGCTGCACTTACAAAGGGTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CAA 72 bp ACCAGGACAATGAGTAAAATCGCCAGTACATTCTCCTaGATGTCTTCAGTTCCGTGGGGTTTCCGACTGGGT +
Preference number: 6 (lower is better)
Translates to: TRTMSKIASTFS*MSSVPWGFRLG
Trigger: ACCCAGTCGGAAACCCCACGGAACTGAAGACATCAAGGAGAATGTACTGGCGATTTTACTCATTGTCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430153.5
ENST00000475463.6
CDS TCA 72 bp TTTATGGGCTCATGTAGACTCAGTGGGTCTCCGGGTTaGGAAGTATCGATGAGAGTAACAGCTACCTCACTA +
Preference number: 6 (lower is better)
Translates to: FMGSCRLSGSPG*EVSMRVTATSL
Trigger: TAGTGAGGTAGCTGTTACTCTCATCGATACTTCTCAACCCGGAGACCCACTGAGTCTACATGAGCCCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS GCA 72 bp GCTTTGAACCTATTCCATCATGTAAACACCCCTCAGTaGACAGCTTTTGTAAGGCAGCCAGTCCATGACAAC +
Preference number: 6 (lower is better)
Translates to: ALNLFHHVNTPQ*TAFVRQPVHDN
Trigger: GTTGTCATGGACTGGCTGCCTTACAAAAGCTGTGCACTGAGGGGTGTTTACATGATGGAATAGGTTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CCA 72 bp TTTCTGTGGCAACTGGTTTTACAGGTATTACTGACTTaGTCGTGGTTTCCAGCATGTGTGCTTGAGACGCAG +
Preference number: 6 (lower is better)
Translates to: FLWQLVLQVLLT*SWFPACVLETQ
Trigger: CTGCGTCTCAAGCACACATGCTGGAAACCACGACCAAGTCAGTAATACCTGTAAAACCAGTTGCCACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CAA 72 bp GCAAAGGGCTGCAGGGACTTCAGAAGTGATTCATTTTaGATCCAGGAGAGGAGTTTGGGAGACGTTACCATA +
Preference number: 6 (lower is better)
Translates to: AKGCRDFRSDSF*IQERSLGDVTI
Trigger: TATGGTAACGTCTCCCAAACTCCTCTCCTGGATCAAAAATGAATCACTTCTGAAGTCCCTGCAGCCCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000462233.5
CDS CAA 72 bp CCTGGATCTCTTTCAATTTGGACTGCCAGTCTTGTGTaGGAATTATCCACTCGCCTTGTACTAGAAGAGGCC +
Preference number: 6 (lower is better)
Translates to: PGSLSIWTASLV*ELSTRLVLEEA
Trigger: GGCCTCTTCTAGTACAAGGCGAGTGGATAATTCCAACACAAGACTGGCAGTCCAAATTGAAAGAGATCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CAA 90 bp TCATCATTCCCTGGATCTCTTTCAATTTGGACTGCCAGTCTTGTGTaGGAATTATCCACTCGCCTTGTACTAGAAGAGGCCACAAAAGGG +
Preference number: 6 (lower is better)
Translates to: SSFPGSLSIWTASLV*ELSTRLVLEEATKG
Trigger: CCCTTTTGTGGCCTCTTCTAGTACAAGGCGAGTGGATAATTCCAACACAAGACTGGCAGTCCAAATTGAAAGAGATCCAGGGAATGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS TCA 72 bp GAGAGTTTCTGTGGCAACTGGTTTTACAGGTATTACTaGCTTGGTCGTGGTTTCCAGCATGTGTGCTTGAGA +
Preference number: 6 (lower is better)
Translates to: ESFCGNWFYRYY*LGRGFQHVCLR
Trigger: TCTCAAGCACACATGCTGGAAACCACGACCAAGTCAGTAATACCTGTAAAACCAGTTGCCACAGAAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS TCA 72 bp GGCTGGAAAGAAACGTCTGTTTCTAGTAAGTCATACTaGGACAAAGACAGGTGGGGCAACTTCTTCAAGGGT +
Preference number: 6 (lower is better)
Translates to: GWKETSVSSKSY*DKDRWGNFFKG
Trigger: ACCCTTGAAGAAGTTGCCCCACCTGTCTTTGTCTCAGTATGACTTACTAGAAACAGACGTTTCTTTCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 72 bp CAGGTGGAGGGAGCTTTCCAAATCTGTCATGGAGTTTaGGGTACTGCTCATCGTGATAACAATTTTTATGGG +
Preference number: 6 (lower is better)
Translates to: QVEGAFQICHGV*GTAHRDNNFYG
Trigger: CCCATAAAAATTGTTATCACGATGAGCAGTACCCCAAACTCCATGACAGATTTGGAAAGCTCCCTCCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CAA 90 bp TACCAGAAAGTCATCCCTGGAGATGCTCTGGCTGTGGGTGTAGAATaGGAACTTAATGAAACAATACAGGAAGAACAGCAGTCAACAAGG +
Preference number: 6 (lower is better)
Translates to: YQKVIPGDALAVGVE*ELNETIQEEQQSTR
Trigger: CCTTGTTGACTGCTGTTCTTCCTGTATTGTTTCATTAAGTTCCAATTCTACACCCACAGCCAGAGCATCTCCAGGGATGACTTTCTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS TCA 72 bp CCACTTTCTTCATTCTGCTCAGCTGAGCCATTCAGTTaGCTGGATGCCGTCATCTTGGAAGTATTAATGGAT +
Preference number: 6 (lower is better)
Translates to: PLSSFCSAEPFS*LDAVILEVLMD
Trigger: ATCCATTAATACTTCCAAGATGACGGCATCCAGTCAACTGAATGGCTCAGCTGAGCAGAATGAAGAAAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258229.14
ENST00000430153.5
ENST00000475463.6
CDS TCA 72 bp CTGCCAATTCCGGATCAGGGCAGAGGGAAGGTCCAATaGGATTTATTAATTGCCTTTCCAAATGCTGTATGT +
Preference number: 6 (lower is better)
Translates to: LPIPDQGRGKVQ*DLLIAFPNAVC
Trigger: ACATACAGCATTTGGAAAGGCAATTAATAAATCTCATTGGACCTTCCCTCTGCCCTGATCCGGAATTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS GCA 72 bp TCTTCTTGTACAGATGTTTCAGGCCCACTGATGACTTaGAAGACAGAACTATCTTGTTGGGAAGTTACCCTG +
Preference number: 6 (lower is better)
Translates to: SSCTDVSGPLMT*KTELSCWEVTL
Trigger: CAGGGTAACTTCCCAACAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCCTGAAACATCTGTACAAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS GCA 72 bp AAACCCAGCAATAACAATTTTGTGCTATGCTATATCTaGCAATTCCGGATCAGGGCAGAGGGAAGGTCCAAT +
Preference number: 6 (lower is better)
Translates to: KPSNNNFVLCYI*QFRIRAEGRSN
Trigger: ATTGGACCTTCCCTCTGCCCTGATCCGGAATTGGCAGATATAGCATAGCACAAAATTGTTATTGCTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS CAA 72 bp CTCTTCTTGTACAGATGTTTCAGGCCCACTGATGACTaGCAAGACAGAACTATCTTGTTGGGAAGTTACCCT +
Preference number: 6 (lower is better)
Translates to: LFLYRCFRPTDD*QDRTILLGSYP
Trigger: AGGGTAACTTCCCAACAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCCTGAAACATCTGTACAAGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS CAA 90 bp AGATGTTTCAGGCCCACTGATGACTTGCAAGACAGAACTATCTTGTaGGGAAGTTACCCTGTAGATTATCTGTCTTTGTCTATTGCCCTG +
Preference number: 6 (lower is better)
Translates to: RCFRPTDDLQDRTIL*GSYPVDYLSLSIAL
Trigger: CAGGGCAATAGACAAAGACAGATAATCTACAGGGTAACTTCCCAACAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCCTGAAACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS CAA 90 bp AAGAGCTTCTCTTTACTTTGGGGTCAAAACCCAGCAATAACAATTTaGTGCTATGCTATATCTGCCAATTCCGGATCAGGGCAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: KSFSLLWGQNPAITI*CYAISANSGSGQRE
Trigger: TTCCCTCTGCCCTGATCCGGAATTGGCAGATATAGCATAGCACAAAATTGTTATTGCTGGGTTTTGACCCCAAAGTAAAGAGAAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS GCA 72 bp CAGGTTGCAGTGAACGTGAAGGAAAAAGCAGCCAAATaGTTGTTATGTTACCAGGACTTCAGGAAAATGACA +
Preference number: 6 (lower is better)
Translates to: QVAVNVKEKAAK*LLCYQDFRKMT
Trigger: TGTCATTTTCCTGAAGTCCTGGTAACATAACAAGCATTTGGCTGCTTTTTCCTTCACGTTCACTGCAACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS CCA 72 bp ATACCAGGTGAGGTAGATGACACTGGTGCTATGGGATaGTCTTCTAATAGAATGACACCTTTGAGATCTTCT +
Preference number: 6 (lower is better)
Translates to: IPGEVDDTGAMG*SSNRMTPLRSS
Trigger: AGAAGATCTCAAAGGTGTCATTCTATTAGAAGACCATCCCATAGCACCAGTGTCATCTACCTCACCTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 72 bp AACACATGGAAGGGAGAGATGAGTAGCTCTCTGATTTaGAGAGAACGGTCTTGTGTCTTAATCAATTTGGAG +
Preference number: 6 (lower is better)
Translates to: NTWKGEMSSSLI*RERSCVLINLE
Trigger: CTCCAAATTGATTAAGACACAAGACCGTTCTCTCCAAATCAGAGAGCTACTCATCTCTCCCTTCCATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CAA 72 bp AGGCCCACTGATGACTTGCAAGACAGAACTATCTTGTaGGGAAGTTACCCTGTAGATTATCTGTCTTTGTCT +
Preference number: 6 (lower is better)
Translates to: RPTDDLQDRTIL*GSYPVDYLSLS
Trigger: AGACAAAGACAGATAATCTACAGGGTAACTTCCCAACAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS CAA 72 bp TTCAGGCCCACTGATGACTTGCAAGACAGAACTATCTaGTTGGGAAGTTACCCTGTAGATTATCTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: FRPTDDLQDRTI*LGSYPVDYLSL
Trigger: CAAAGACAGATAATCTACAGGGTAACTTCCCAACAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS CAA 72 bp ACCAGGACAATGAGTAAAATCGCCAGTACATTCTCCTaGATGTCTTCAGTTCGATCAAGTAATGCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: TRTMSKIASTFS*MSSVRSSNASK
Trigger: CTTGCTGGCATTACTTGATCGAACTGAAGACATCAAGGAGAATGTACTGGCGATTTTACTCATTGTCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000518351.2
ENST00000519530.1
CDS CAA 90 bp TACAGATGTTTCAGGCCCACTGATGACTTGCAAGACAGAACTATCTaGTTGGGAAGTTACCCTGTAGATTATCTGTCTTTGTCTATTGCC +
Preference number: 6 (lower is better)
Translates to: YRCFRPTDDLQDRTI*LGSYPVDYLSLSIA
Trigger: GGCAATAGACAAAGACAGATAATCTACAGGGTAACTTCCCAACAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCCTGAAACATCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS TCA 72 bp TATCTTTCTCTTCAAATTGATTTCAGGAAATGGTGGTaGGTAGTCAACGTCTCCACCACCTGCTTTCAAGAG +
Preference number: 6 (lower is better)
Translates to: YLSLQIDFRKWW*VVNVSTTCFQE
Trigger: CTCTTGAAAGCAGGTGGTGGAGACGTTGACTACTCACCACCATTTCCTGAAATCAATTTGAAGAGAAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS CAA 72 bp TTAATGGATTCTAACAGGGAGACAAATTCCAGGAAGTaGGACTCATTTGGCATTTGTCCTTCCTTAGCCTCT +
Preference number: 6 (lower is better)
Translates to: LMDSNRETNSRK*DSFGICPSLAS
Trigger: AGAGGCTAAGGAAGGACAAATGCCAAATGAGTCCAACTTCCTGGAATTTGTCTCCCTGTTAGAATCCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CAA 72 bp TCTTTACTTTGGGGTCAAAACCCAGCAATAACAATTTaGTGCTATGCTATATCTGCCAATTCCGGATCAGGG +
Preference number: 6 (lower is better)
Translates to: SLLWGQNPAITI*CYAISANSGSG
Trigger: CCCTGATCCGGAATTGGCAGATATAGCATAGCACAAAATTGTTATTGCTGGGTTTTGACCCCAAAGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS CAA 90 bp TTGGAAGTATTAATGGATTCTAACAGGGAGACAAATTCCAGGAAGTaGGACTCATTTGGCATTTGTCCTTCCTTAGCCTCTAGGTCAGAT +
Preference number: 6 (lower is better)
Translates to: LEVLMDSNRETNSRK*DSFGICPSLASRSD
Trigger: ATCTGACCTAGAGGCTAAGGAAGGACAAATGCCAAATGAGTCCAACTTCCTGGAATTTGTCTCCCTGTTAGAATCCATTAATACTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CAA 90 bp CACAGATATCTCTTCTTGTACAGATGTTTCAGGCCCACTGATGACTaGCAAGACAGAACTATCTTGTTGGGAAGTTACCCTGTAGATTAT +
Preference number: 6 (lower is better)
Translates to: HRYLFLYRCFRPTDD*QDRTILLGSYPVDY
Trigger: ATAATCTACAGGGTAACTTCCCAACAAGATAGTTCTGTCTTGCAAGTCATCAGTGGGCCTGAAACATCTGTACAAGAAGAGATATCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS CAA 90 bp ATCTGTCAGGTTGCAGTGAACGTGAAGGAAAAAGCAGCCAAATGCTaGTTATGTTACCAGGACTTCAGGAAAATGACACTTGAAATTGCT +
Preference number: 6 (lower is better)
Translates to: ICQVAVNVKEKAAKC*LCYQDFRKMTLEIA
Trigger: AGCAATTTCAAGTGTCATTTTCCTGAAGTCCTGGTAACATAACAAGCATTTGGCTGCTTTTTCCTTCACGTTCACTGCAACCTGACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324142.4
CDS TCA 72 bp AATTTCAATCAGGTGAACAAAGGCATTGAGGTCATCTaGAGCCAAAATAAAGCAATCGCCAGAGCTGTAGTT +
Preference number: 6 (lower is better)
Translates to: NFNQVNKGIEVI*SQNKAIARAVV
Trigger: AACTACAGCTCTGGCGATTGCTTTATTTTGGCTTCAGATGACCTCAATGCCTTTGTTCACCTGATTGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000344698.6
ENST00000429988.2
ENST00000462233.5
CDS TCA 72 bp AAAACACAAATCAGAAGTGTCTGTGTCATCATCTCATaGTTTCAAGGCTACATTAGTGACAGCACACGCTAC +
Preference number: 6 (lower is better)
Translates to: KTQIRSVCVIIS*FQGYISDSTRY
Trigger: GTAGCGTGTGCTGTCACTAATGTAGCCTTGAAATCATGAGATGATGACACAGACACTTCTGATTTGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519530.1
CDS CCA 72 bp CTGGATCTCTTTCAATTTGGACTGCCAGTCTTGTGTTaGAATTATCCACTCGCCTTGTATTGTAGTTTTTCT +
Preference number: 6 (lower is better)
Translates to: LDLFQFGLPVLC*NYPLALYCSFS
Trigger: AGAAAAACTACAATACAAGGCGAGTGGATAATTCCAACACAAGACTGGCAGTCCAAATTGAAAGAGATCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258229.14
ENST00000462233.5
CDS GCA 72 bp CAGGATCTAATTTCCCCATGTTCATCAATGAAGACATaGATAGCATCCACAGATATCTCTTCTTGTACAGAT +
Preference number: 6 (lower is better)
Translates to: QDLISPCSSMKT*IASTDISSCTD
Trigger: ATCTGTACAAGAAGAGATATCTGTGGATGCTATGCATGTCTTCATTGATGAACATGGGGAAATTAGATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258229.14
ENST00000324142.4
ENST00000430153.5
ENST00000475463.6
CDS CAA 72 bp CTGATTTGGAGAGAACGGTCTTGTGTCTTAATCAATTaGGAGCACCAGATCTGCAAAATCAAAGCAAGTATT +
Preference number: 6 (lower is better)
Translates to: LIWRERSCVLIN*EHQICKIKASI
Trigger: AATACTTGCTTTGATTTTGCAGATCTGGTGCTCCAAATTGATTAAGACACAAGACCGTTCTCTCCAAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344698.6
CDS GCA 72 bp AGTTGGCATTGTTTTCTCTGTATCGTTAACAATTTCTaGAGAACTTTTACTCAAGAAGACATCTGTCCCACT +
Preference number: 6 (lower is better)
Translates to: SWHCFLCIVNNF*RTFTQEDICPT
Trigger: AGTGGGACAGATGTCTTCTTGAGTAAAAGTTCTGCAGAAATTGTTAACGATACAGAGAAAACAATGCCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258229.14
CDS CCA 72 bp AAGCAAAATAAGGCCACACAGCACACAAAAATAGATTaGTCTGCTATATGTTATGATTTGGTTGTGTCCCTT +
Preference number: 6 (lower is better)
Translates to: KQNKATQHTKID*SAICYDLVVSL
Trigger: AAGGGACACAACCAAATCATAACATATAGCAGACCAATCTATTTTTGTGTGCTGTGTGGCCTTATTTTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518351.2