RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCNX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100731

Ensembl transcript IDs: ENST00000304743.7, ENST00000439984.7, ENST00000553272.6, ENST00000553428.2, ENST00000553508.5, ENST00000554292.1, ENST00000554691.5, ENST00000554707.1, ENST00000554879.5, ENST00000555780.1, ENST00000556272.1, ENST00000556516.1, ENST00000556846.1, ENST00000556849.2, ENST00000557428.1

Found 896 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGAGCTTGCTCTGGTGGAGAGAAGCAGAGCACATGGGCTCCTCTaGGATGTAGACACAGGAGCTGGCAGTGGTGTTCACAAGACCGAT +
Preference number: 1 (lower is better)
Translates to: AELALVERSRAHGLL*DVDTGAGSGVHKTD
Trigger: ATCGGTCTTGTGAACACCACTGCCAGCTCCTGTGTCTACATCTCAGAGGAGCCCATGTGCTCTGCTTCTCTCCACCAGAGCAAGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR CCA 90 bp GAGAAGCAGAGCACATGGGCTCCTCTGAGATGTAGACACAGGAGCTaGCAGTGGTGTTCACAAGACCGATCCGCTGACTATTGGCTCTGG +
Preference number: 1 (lower is better)
Translates to: EKQSTWAPLRCRHRS*QWCSQDRSADYWLW
Trigger: CCAGAGCCAATAGTCAGCGGATCGGTCTTGTGAACACCACTGCCAGCTCCTGTGTCTACATCTCAGAGGAGCCCATGTGCTCTGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR GCA 90 bp AAGGCCCAGTGCTGGATGAATGACTCACAACAGCAATCCACCAAATaGAGAGCTGCTAAGCAGAGGCAGAAGGATGCTGCTCAGAAGCAC +
Preference number: 1 (lower is better)
Translates to: KAQCWMNDSQQQSTK*RAAKQRQKDAAQKH
Trigger: GTGCTTCTGAGCAGCATCCTTCTGCCTCTGCTTAGCAGCTCTGCATTTGGTGGATTGCTGTTGTGAGTCATTCATCCAGCACTGGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR GCA 90 bp CTTAAAGAAAATTGTTTTCTTCCCAGAAGCACGCCCAGCAGAGCTTaGTCTGGTGGAGAGAAGCAGAGCACATGGGCTCCTCTGAGATGT +
Preference number: 1 (lower is better)
Translates to: LKENCFLPRSTPSRA*SGGEKQSTWAPLRC
Trigger: ACATCTCAGAGGAGCCCATGTGCTCTGCTTCTCTCCACCAGAGCAAGCTCTGCTGGGCGTGCTTCTGGGAAGAAAACAATTTTCTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR TCA 90 bp GAGTCATCTGGAGCAGCCATCTTATGCTCTATCACTACTCTGTTGTaGATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAT +
Preference number: 1 (lower is better)
Translates to: ESSGAAILCSITTLL*IPGHHLIVQVKLRN
Trigger: ATTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGATGGCTGCTCCAGATGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR TCA 90 bp TTTAGACACTGGGTGAATCTTCAGCTTAAAAGGCCCAGTGCTGGATaGATGACTCACAACAGCAATCCACCAAATGCAGAGCTGCTAAGC +
Preference number: 1 (lower is better)
Translates to: FRHWVNLQLKRPSAG*MTHNSNPPNAELLS
Trigger: GCTTAGCAGCTCTGCATTTGGTGGATTGCTGTTGTGAGTCATTCATCCAGCACTGGGCCTTTTAAGCTGAAGATTCACCCAGTGTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTaGTTGTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAA +
Preference number: 1 (lower is better)
Translates to: QSLPHRIKVIPAGIF*LFLSFSNALELRGK
Trigger: TTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
3UTR TCA 90 bp AACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATCAAAGTaGTACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATG +
Preference number: 1 (lower is better)
Translates to: NQAHSIFSRSHIGSK*YLQASSACSSLFPM
Trigger: CATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
3UTR CCA 90 bp ACACACACACTCACAGACACACGTAAGTACATATGTCCTTATCTCTaGTTTATACTGAATGCTGGTAAAGGCCATGAATACTTTCCAGAG +
Preference number: 1 (lower is better)
Translates to: THTLTDTRKYICPYL*FILNAGKGHEYFPE
Trigger: CTCTGGAAAGTATTCATGGCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR GCA 90 bp TTCAATGATTTATTCACAAGGGGTAGAAAGATGGCTGCTCCTAAATaGTCAGAGGAGATGTACAATTTTCTTTGGAGTTTCACACCAAAA +
Preference number: 1 (lower is better)
Translates to: FNDLFTRGRKMAAPK*SEEMYNFLWSFTPK
Trigger: TTTTGGTGTGAAACTCCAAAGAAAATTGTACATCTCCTCTGAGCATTTAGGAGCAGCCATCTTTCTACCCCTTGTGAATAAATCATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR TCA 90 bp GACTATTGGCTCTGGGAAATGTCAATGATGAAGCTACGTATATCTTaGGATTCTATATTCACTTTAAAGAAAATACCCAATGTCCTGGCA +
Preference number: 1 (lower is better)
Translates to: DYWLWEMSMMKLRIS*DSIFTLKKIPNVLA
Trigger: TGCCAGGACATTGGGTATTTTCTTTAAAGTGAATATAGAATCTCAAGATATACGTAGCTTCATCATTGACATTTCCCAGAGCCAATAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR TCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAGCACATGGGCTCCTCTaGGATGTAGACACAGGAGCT +
Preference number: 2 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEAHGLL*DVDTGA
Trigger: AGCTCCTGTGTCTACATCTCAGAGGAGCCCATGTGC...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR GCA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCGCAGAGGCAGAAGGATaGTGCTCAGAAGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCAEAEG*CSEAQR
Trigger: CCTCTGTGCTTCTGAGCAGCATCCTTCTGCCTCTGC...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR GCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAACGCCCAGCAGAGCTTaGTCTGGTGGAGAGAAGCAG +
Preference number: 2 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKTPSRA*SGGEKQ
Trigger: CTGCTTCTCTCCACCAGAGCAAGCTCTGCTGGGCGT...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR CCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACTCACTCACTATTCTCTaGGGGGTGAGGGGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHSLTIL*GVRGEA
Trigger: TGCCTCACCCCTCACCCCCCAGAGAATAGTGAGTGA...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR CAA 90 bp TCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTaGTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: SLPHRIKVIPAGIFC*FLSFSNALELRGKK
Trigger: CTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
3UTR-3UTR TCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAACCAGTGCTGGATGAATaGCTCACAACAGCAATCCAC +
Preference number: 2 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKPVLDE*LTTAIH
Trigger: GTGGATTGCTGTTGTGAGTCATTCATCCAGCACTGG...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR TCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACACTTTAGACACTGGGTaGATCTTCAGCTTAAAAGGC +
Preference number: 2 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHTLDTG*IFSLKG
Trigger: GCCTTTTAAGCTGAAGATTCACCCAGTGTCTAAAGT...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR TCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTCATCACAGTGTTAGATaGCCTTTGTTCCTTCTAGCT +
Preference number: 2 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLHHSVR*PLFLLA
Trigger: AGCTAGAAGGAACAAAGGTCATCTAACACTGTGATG...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR GCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACATGGCTGCTCCTAAATaGTCAGAGGAGATGTACAAT +
Preference number: 2 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHMAAPK*SEEMYN
Trigger: ATTGTACATCTCCTCTGAGCATTTAGGAGCAGCCAT...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR CCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTAAGAAGGCAGAACACTaGTTAAGTTTGTTCACTAAT +
Preference number: 2 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLKKAEH*LSLFTN
Trigger: ATTAGTGAACAAACTTAACCAGTGTTCTGCCTTCTT...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR TCA 72 bp GCTCTGGTGGAGAGAAGCAGAGCACATGGGCTCCTCTaGGATGTAGACACAGGAGCTGGCAGTGGTGTTCAC +
Preference number: 3 (lower is better)
Translates to: ALVERSRAHGLL*DVDTGAGSGVH
Trigger: GTGAACACCACTGCCAGCTCCTGTGTCTACATCTCAGAGGAGCCCATGTGCTCTGCTTCTCTCCACCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR CCA 72 bp TTTTCTTCCCAGAAGCACGCCCAGCAGAGCTTGCTCTaGTGGAGAGAAGCAGAGCACATGGGCTCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: FSSQKHAQQSLL*WREAEHMGSSE
Trigger: CTCAGAGGAGCCCATGTGCTCTGCTTCTCTCCACCAGAGCAAGCTCTGCTGGGCGTGCTTCTGGGAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR GCA 72 bp AATTGTTTTCTTCCCAGAAGCACGCCCAGCAGAGCTTaGTCTGGTGGAGAGAAGCAGAGCACATGGGCTCCT +
Preference number: 3 (lower is better)
Translates to: NCFLPRSTPSRA*SGGEKQSTWAP
Trigger: AGGAGCCCATGTGCTCTGCTTCTCTCCACCAGAGCAAGCTCTGCTGGGCGTGCTTCTGGGAAGAAAACAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR TCA 72 bp CAGGAGCTGGCAGTGGTGTTCACAAGACCGATCCGCTaGCTATTGGCTCTGGGAAATGTCAATGATGAAGCT +
Preference number: 3 (lower is better)
Translates to: QELAVVFTRPIR*LLALGNVNDEA
Trigger: AGCTTCATCATTGACATTTCCCAGAGCCAATAGTCAGCGGATCGGTCTTGTGAACACCACTGCCAGCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR TCA 72 bp GGAGCAGCCATCTTATGCTCTATCACTACTCTGTTGTaGATTCCGGGGCACCACCTCATTGTGCAGGTAAAA +
Preference number: 3 (lower is better)
Translates to: GAAILCSITTLL*IPGHHLIVQVK
Trigger: TTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGATGGCTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR TCA 72 bp TGGGTGAATCTTCAGCTTAAAAGGCCCAGTGCTGGATaGATGACTCACAACAGCAATCCACCAAATGCAGAG +
Preference number: 3 (lower is better)
Translates to: WVNLQLKRPSAG*MTHNSNPPNAE
Trigger: CTCTGCATTTGGTGGATTGCTGTTGTGAGTCATTCATCCAGCACTGGGCCTTTTAAGCTGAAGATTCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTCTTTTTCCAATGCCTaGGAATTGAGAGGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFSFSNA*ELRGKK
Trigger: CTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
3UTR CCA 72 bp AAAGCAGAGAATCTAAACGAGTCACTCACTATTCTCTaGGGGGTGAGGGGTGAGGCAGGAACAAGAATTTAT +
Preference number: 3 (lower is better)
Translates to: KAENLNESLTIL*GVRGEAGTRIY
Trigger: ATAAATTCTTGTTCCTGCCTCACCCCTCACCCCCCAGAGAATAGTGAGTGACTCGTTTAGATTCTCTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTCTTTTTCCAATGCCTaGGAATTGAGAGGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHSFSNA*ELRGKK
Trigger: CTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
3UTR TCA 72 bp CATTCTATTTTCAGTCGCTCCCACATAGGATCAAAGTaGTACCTGCAGGCATCTTCTGCTTGTTCCTCTCTT +
Preference number: 3 (lower is better)
Translates to: HSIFSRSHIGSK*YLQASSACSSL
Trigger: AAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
3UTR-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTCTTTTTCCAATGCCTaGGAATTGAGAGGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCSFSNA*ELRGKK
Trigger: CTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGA...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
3UTR TCA 72 bp GCTAGCTATAAGAAAAGGACAACTTTAGACACTGGGTaGATCTTCAGCTTAAAAGGCCCAGTGCTGGATGAA +
Preference number: 3 (lower is better)
Translates to: ASYKKRTTLDTG*IFSLKGPVLDE
Trigger: TTCATCCAGCACTGGGCCTTTTAAGCTGAAGATTCACCCAGTGTCTAAAGTTGTCCTTTTCTTATAGCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR CAA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACCCACTGAATCATAAATaGTCAGGTACAGAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHPLNHK*SGTELR
Trigger: CCTCAGCTCTGTACCTGACAATTTATGATTCAGTGG...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR CCA 72 bp TGTTCAATCACAAGTACACTAAACCCAAGAGTCATCTaGAGCAGCCATCTTATGCTCTATCACTACTCTGTT +
Preference number: 3 (lower is better)
Translates to: CSITSTLNPRVI*SSHLMLYHYSV
Trigger: AACAGAGTAGTGATAGAGCATAAGATGGCTGCTCCAGATGACTCTTGGGTTTAGTGTACTTGTGATTGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR CAA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAGGCTATAAGCTAAACTaGCTGAAAAATGTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKGYKLN*LKNVRL
Trigger: CAGCCTCACATTTTTCAGCAAGTTTAGCTTATAGCC...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR TCA 72 bp CACGTAAGTACATATGTCCTTATCTCTGGTTTATACTaGATGCTGGTAAAGGCCATGAATACTTTCCAGAGC +
Preference number: 3 (lower is better)
Translates to: HVSTYVLISGLY*MLVKAMNTFQS
Trigger: GCTCTGGAAAGTATTCATGGCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR CCA 72 bp CTCACAGACACACGTAAGTACATATGTCCTTATCTCTaGTTTATACTGAATGCTGGTAAAGGCCATGAATAC +
Preference number: 3 (lower is better)
Translates to: LTDTRKYICPYL*FILNAGKGHEY
Trigger: GTATTCATGGCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGTGTCTGTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
3UTR-3UTR CAA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCTTTGTTCCTTCTAGCTaGGCTCCACTGAATCATAAA +
Preference number: 3 (lower is better)
Translates to: TRKYICPYLWFILNAGKGFVPSS*APLNHK
Trigger: TTTATGATTCAGTGGAGCCAAGCTAGAAGGAACAAA...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGGCGGTCGCTGGTGCTaGTGCAGGAGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFGGRWC*CRRRRR
Trigger: CCTCCTCCTCCTCCTGCAGCAGCACCAGCGACCGCC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGGGCAGGAGACTGTCTaGCCAGGCCCGACTGCACAG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFGQETV*PGPTAQ
Trigger: CTGTGCAGTCGGGCCTGGTCAGACAGTCTCCTGCCC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCAGACTGGCTGGCTACTaGGGCCCGGGCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFRLAGY*GPGRRL
Trigger: CAGTCTCCTGCCCGGGCCTCAGTAGCCAGCCAGTCT...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCGAGGAAGGCAGGCCGTaGTGCACACAGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCEEGRP*CTQARP
Trigger: CGGCCTGGCCTGTGTGCAGCACGGCCTGCCTTCCTC...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTGAGGAAGGCAGGCCGTaGTGCACACAGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSEEGRP*CTQARP
Trigger: CGGCCTGGCCTGTGTGCAGCACGGCCTGCCTTCCTC...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACCTCCGGAGCTCCGGGTaGGCGAGCCGGCGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHLRSSG*ASRRFG
Trigger: GCCGAAGCGCCGGCTCGCTCACCCGGAGCTCCGGAG...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAAGACTGGCTGGCTACTaGGGCCCGGGCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQERLAGY*GPGRRL
Trigger: CAGTCTCCTGCCCGGGCCTCAGTAGCCAGCCAGTCT...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAAGGATCTGCAGCGTCTaGGACCCCATCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQERICSV*DPIPTR
Trigger: CCGGGTGGGGATGGGGTCGCAGACGCTGCAGATCCT...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCGCTTCGGCGGTCGCTaGTGCTGCTGCAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCRFGGR*CCCRRR
Trigger: CCTCCTCCTGCAGCAGCACCAGCGACCGCCGAAGCG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGCGCGTTCACGAAGGTaGCCTGGTGCGGGTCGTAGT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFARSRR*PGAGRS
Trigger: ACTACGACCCGCACCAGGCCACCTTCGTGAACGCGC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTGCGTTCACGGCGAAATaGCACTGCCTCCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSAFTAK*HCLLAG
Trigger: GCCAGCGAGGAGGCAGTGTCATTTCGCCGTGAACGC...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGGCAGGAGACTGTCTaGCCAGGCCCGACTGCACAG +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIGQETV*PGPTAQ
Trigger: CTGTGCAGTCGGGCCTGGTCAGACAGTCTCCTGCCC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAGACTGGCTGGCTACTaGGGCCCGGGCAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCRLAGY*GPGRRL
Trigger: CAGTCTCCTGCCCGGGCCTCAGTAGCCAGCCAGTCT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCAGGCCAGGCCGCTCTaGCCTGAGGGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSQARPL*PEGSIW
Trigger: CCAAATGGAACCCTCAGGTCAGAGCGGCCTGGCCTG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGCCGGAGCCTGCAGCTaGCCCGTCTATCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGAGACS*PVYPPP
Trigger: CGGAGGTGGATAGACGGGGCAGCTGCAGGCTCCGGC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGAGGAAGGCAGGCCGTaGTGCACACAGGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSEEGRP*CTQARP
Trigger: CGGCCTGGCCTGTGTGCAGCACGGCCTGCCTTCCTC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
3UTR CAA 72 bp AAATTGTTTTCTTCCCAGAAGCACGCCCAGCAGAGCTaGCTCTGGTGGAGAGAAGCAGAGCACATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KLFSSQKHAQQS*LWWREAEHMGS
Trigger: GGAGCCCATGTGCTCTGCTTCTCTCCACCAGAGCAAGCTCTGCTGGGCGTGCTTCTGGGAAGAAAACAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAAGGAGACCGGCCTTCTaGGAGCCGCCGCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIRRPAF*EPPPSC
Trigger: ACAAGATGGCGGCGGCTCTCAGAAGGCCGGTCTCCT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGCGGGACTGGACTTTaGCCTGGGCTGTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIGGTGL*PGLWTA
Trigger: AGCAGTCCACAGCCCAGGTCAAAGTCCAGTCCCGCC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGGACATCCGGAGGGATaGATGCCGGCTGCTATAGCA +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFGHPEG*MPAAIA
Trigger: TGCTATAGCAGCCGGCATTCATCCCTCCGGATGTCC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTTCGGCGGTCGCTGGTaGTGCTGCAGGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCFGGRW*CCRRRR
Trigger: CCTCCTCCTCCTGCAGCAGCACCAGCGACCGCCGAA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACCCTGTCGGAGGATCTaGAGCGTCTGCGACCCCATC +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIPCRRI*SVCDPI
Trigger: GATGGGGTCGCAGACGCTGCAGATCCTCCGACAGGG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGTGCCGGCGCCGTACTaGCTGGCGCCTAAATGTGCT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIVPAPY*LAPKCA
Trigger: AGCACATTTAGGCGCCAGGCAGTACGGCGCCGGCAC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTACTGCACTCCGCCATaGAGGGTCCCCTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHYCTPP*RVPFMG
Trigger: GCCCATGAAGGGGACCCTGCATGGCGGAGTGCAGTA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGTTTGCAGGCTGGGATaGTTTGGCTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFVCRLG*FGWSCW
Trigger: CCAGCAGCTCCAGCCAAAGCATCCCAGCCTGCAAAC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGCGCGTTCACGAAGGTaGCCTGGTGCGGGTCGTAGT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCARSRR*PGAGRS
Trigger: ACTACGACCCGCACCAGGCCACCTTCGTGAACGCGC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGGAACTGCAACCAACTaGGGGTGTGGCCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFGTATN*GCGLSD
Trigger: ATCCGAGAGGCCACACCCCCAGTTGGTTGCAGTTCC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTTTGGCTGGAGCTGCTaGAGGAAGGCAGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHFGWSC*RKAGRA
Trigger: AGCACGGCCTGCCTTCCTCCAGCAGCTCCAGCCAAA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTGGCTGTGCATCAGTaGCACTGCTCTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFLAVHQ*HCSDLP
Trigger: AGGGAGGTCAGAGCAGTGCCACTGATGCACAGCCAG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGGGTCCTTGGCCTCGTaGACCCCACTGTTGGTACTC +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCGSLAS*TPLLVL
Trigger: GAGTACCAACAGTGGGGTTCACGAGGCCAAGGACCC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTGTGGAGTCCAGTTCCTaGTCCCTGCCCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSVESSS*SLPRIS
Trigger: GGAAATCCTGGGCAGGGATCAGGAACTGGACTCCAC...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACCCGACTGCACAGAGTaGGAGCTGTGGCTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIPDCTE*ELWLVP
Trigger: AGGCACTAGCCACAGCTCTCACTCTGTGCAGTCGGG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTCAGTGGCACTGCTCTaGCCTCCCTCTGTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSSVALL*PPSVAR
Trigger: TCTTGCGACAGAGGGAGGTCAGAGCAGTGCCACTGA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAGCCGGAGCCTGCAGCTaGCCCGTCTATCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKAGACS*PVYPPP
Trigger: CGGAGGTGGATAGACGGGGCAGCTGCAGGCTCCGGC...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAACTCCTGCTGTTGCCCTaGCCAAAGACCTCGGACACA +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQELLLLP*PKTSDT
Trigger: TGTGTCCGAGGTCTTTGGGCAGGGCAACAGCAGGAG...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCGTTTGCAGGCTGGGATaGTTTGGCTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCVCRLG*FGWSCW
Trigger: CCAGCAGCTCCAGCCAAAGCATCCCAGCCTGCAAAC...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTCTCATCAGAGGGGGTaGGGTCCTTGGCCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSSHQRG*GPWPRE
Trigger: TTCACGAGGCCAAGGACCCCACCCCCTCTGATGAGA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTGCAGTGTTCCCAGGTaGTCTGTCCCCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFCSVPR*SVPLGS
Trigger: ACTTCCCAAGGGGACAGACCACCTGGGAACACTGCA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAACTCCTGCCTGACTTGTaGGCAGAAGCTGTCCGATGG +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQELLPDL*AEAVRW
Trigger: CCATCGGACAGCTTCTGCCCACAAGTCAGGCAGGAG...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGATGTGACAGGTGGGTaGAGTCCAGTTCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFDVTGG*SPVPDP
Trigger: GGGATCAGGAACTGGACTCCACCCACCTGTCACATC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTTGGCTGGAGCTGCTaGAGGAAGGCAGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCFGWSC*RKAGRA
Trigger: AGCACGGCCTGCCTTCCTCCAGCAGCTCCAGCCAAA...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCTGGGATGCTTTGGCTaGAGCTGCTGGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSLGCFG*SCWRKA
Trigger: TGCCTTCCTCCAGCAGCTCCAGCCAAAGCATCCCAG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCTGGGATGCTTTGGCTaGAGCTGCTGGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHLGCFG*SCWRKA
Trigger: TGCCTTCCTCCAGCAGCTCCAGCCAAAGCATCCCAG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCTGGCTGTGCATCAGTaGCACTGCTCTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSLAVHQ*HCSDLP
Trigger: AGGGAGGTCAGAGCAGTGCCACTGATGCACAGCCAG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGCAGTAGCTTTCTGTTaGCCCACTACTCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFAVAFC*PTTPCA
Trigger: AGCACACGGAGTAGTGGGTCAACAGAAAGCTACTGC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGGGTCCTTGGCCTCGTaGACCCCACTGTTGGTACTC +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCGSLAS*TPLLVL
Trigger: GAGTACCAACAGTGGGGTTCACGAGGCCAAGGACCC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGCCGAGACAGCAGCCTaGATAAACAGCATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFAETAA*INSMAE
Trigger: TTCAGCCATGCTGTTTATTCAGGCTGCTGTCTCGGC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAATGGTGCCATCATCCATaGCATGCCGCAGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEWCHHP*HAAEQA
Trigger: TGCTTGCTCTGCGGCATGTCATGGATGATGGCACCA...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACCCGACTGCACAGAGTaGGAGCTGTGGCTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGPDCTE*ELWLVP
Trigger: AGGCACTAGCCACAGCTCTCACTCTGTGCAGTCGGG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACATCCGGAGGGATaGATGCCGGCTGCTATAGCA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIGHPEG*MPAAIA
Trigger: TGCTATAGCAGCCGGCATTCATCCCTCCGGATGTCC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCAGGCCAGGCCGCTCTaGCCTGAGGGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNQARPL*PEGSIW
Trigger: CCAAATGGAACCCTCAGGTCAGAGCGGCCTGGCCTG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAAGCCCACGAGAGTGTaGTGTTTGCAGGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSKPTRV*CLQAGM
Trigger: CATCCCAGCCTGCAAACATCACACTCTCGTGGGCTT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATATCAGTGGCACTGCTCTaGCCTCCCTCTGTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHISVALL*PPSVAR
Trigger: TCTTGCGACAGAGGGAGGTCAGAGCAGTGCCACTGA...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTGCACATGGGCTCCTCTaGGATGTAGACACAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSAHGLL*DVDTGA
Trigger: AGCTCCTGTGTCTACATCTCAGAGGAGCCCATGTGC...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATTACTCCCTGCATTGTaGCGGCGCCGTACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGLLPAL*RRRTAW
Trigger: CCAGGCAGTACGGCGCCGGCACAATGCAGGGAGTAA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGGTAGGGTTACTCCCTaGATTGTGCCGGCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCGRVTP*IVPAPY
Trigger: GTACGGCGCCGGCACAATGCAGGGAGTAACCCTACC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAGAGTTGGCAAGTACTaGACTCCGCCATGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSRVGKY*TPPCRV
Trigger: GACCCTGCATGGCGGAGTGCAGTACTTGCCAACTCT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCTCCTGCTGTTGCCCTaGCCAAAGACCTCGGACACA +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCLLLLP*PKTSDT
Trigger: TGTGTCCGAGGTCTTTGGGCAGGGCAACAGCAGGAG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTTCCCTGGGTCACGTTaGTGTGGGGATTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHFPGSR*CGDCWQ
Trigger: CTGCCAACAATCCCCACAGCAACGTGACCCAGGGAA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGTTTGCAGGCTGGGATaGTTTGGCTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIVCRLG*FGWSCW
Trigger: CCAGCAGCTCCAGCCAAAGCATCCCAGCCTGCAAAC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGTGCATCAGTGGCACTaGTCTGACCTCCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIVHQWH*SDLPLS
Trigger: CGACAGAGGGAGGTCAGAGCAGTGCCACTGATGCAC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGGTGTTGCCTGGCTGTaGATCAGTGGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCGVAWL*ISGTAL
Trigger: CAGAGCAGTGCCACTGATGCACAGCCAGGCAACACC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCACGCCCAGCAGAGCTTaGTCTGGTGGAGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCTPSRA*SGGEKQ
Trigger: CTGCTTCTCTCCACCAGAGCAAGCTCTGCTGGGCGT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCTCCTGCCTGACTTGTaGGCAGAAGCTGTCCGATGG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCLLPDL*AEAVRW
Trigger: CCATCGGACAGCTTCTGCCCACAAGTCAGGCAGGAG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACAGGCTGGGATGCTTTaGCTGGAGCTGCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIQAGML*LELLEE
Trigger: TTCCTCCAGCAGCTCCAGCCAAAGCATCCCAGCCTG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGTGATGTTTGCAGGCTaGGATGCTTTGGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFVMFAG*DALAGA
Trigger: AGCTCCAGCCAAAGCATCCCAGCCTGCAAACATCAC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTGTCGATGTGGGATCTaGTACCTGGATCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFCRCGI*YLDLCC
Trigger: GCAGCAGAGATCCAGGTACCAGATCCCACATCGACA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCAGCAGAGCTTGCTCTaGTGGAGAGAAGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSQQSLL*WREAEH
Trigger: GTGCTCTGCTTCTCTCCACCAGAGCAAGCTCTGCTG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTGGTGGTGGTGGTTATaGCTTGGCAGGTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFWWWWL*LGRFTL
Trigger: CAAAGTGAACCTGCCAAGTCATAACCACCACCACCA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCACTGCTTTGTCGGCTaGGATGGTAAGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSHCFVG*DGKTLP
Trigger: TGGCAGTGTCTTACCATCTCAGCCGACAAAGCAGTG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACGCCGAGACAGCAGCCTaGATAAACAGCATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHAETAA*INSMAE
Trigger: TTCAGCCATGCTGTTTATTCAGGCTGCTGTCTCGGC...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCCCGCAGCTGAAAAGTaGCCAGACCATTGCCTATCT +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHPAAEK*PDHCLS
Trigger: AGATAGGCAATGGTCTGGTCACTTTTCAGCTGCGGG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTCAAGTCCCCGCAGCTaGAAAGTGACCAGACCATTG +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHSSPRS*KVTRPL
Trigger: CAATGGTCTGGTCACTTTTCAGCTGCGGGGACTTGA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGTGGAGTCCAGTTCCTaGTCCCTGCCCAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGVESSS*SLPRIS
Trigger: GGAAATCCTGGGCAGGGATCAGGAACTGGACTCCAC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAACAGGCCAGGCCGCTCTaGCCTGAGGGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKQARPL*PEGSIW
Trigger: CCAAATGGAACCCTCAGGTCAGAGCGGCCTGGCCTG...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCACCCACTACTCCGTGTaGTCAGGCTCCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCTHYSV*SGSSSC
Trigger: ACAGCTTGAGGAGCCTGAGCACACGGAGTAGTGGGT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACCCGGTCCGTTCCACTaGAGTAGCTTTCTGTTGACC +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIPGPFH*SSFLLT
Trigger: GGTCAACAGAAAGCTACTGCAGTGGAACGGACCGGG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTTAGAGCACTGTATCTaGCCTCAGGAGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFLEHCI*PQETDR
Trigger: CCTGTCAGTCTCCTGAGGGCAGATACAGTGCTCTAA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTGCTGCTCCACTGACTaGATCTTGCTCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSCCSTD*ILLFPF
Trigger: GAAGGGGAAGAGCAAGATGCAGTCAGTGGAGCAGCA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCTCGCTGGCTTGTGCTaGTCCACTGACTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCLAGLC*STDCIL
Trigger: CAAGATGCAGTCAGTGGAGCAGCACAAGCCAGCGAG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCTCCTGCTGTTGCCCTaGCCAAAGACCTCGGACACA +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSLLLLP*PKTSDT
Trigger: TGTGTCCGAGGTCTTTGGGCAGGGCAACAGCAGGAG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGCCCAGGATTTCCAATaGTTCCCTGGGTCACGTTGC +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIAQDFQ*FPGSRC
Trigger: GCAACGTGACCCAGGGAAGCATTGGAAATCCTGGGC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCCAGTTCCTGATCCCTaGCCAGGATTTCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFPVPDP*PGFPML
Trigger: AAGCATTGGAAATCCTGGGCAGGGATCAGGAACTGG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGGTGCATCAGTGGCACTaGTCTGACCTCCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKVHQWH*SDLPLS
Trigger: CGACAGAGGGAGGTCAGAGCAGTGCCACTGATGCAC...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGTGCATCAGTGGCACTaGTCTGACCTCCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSVHQWH*SDLPLS
Trigger: CGACAGAGGGAGGTCAGAGCAGTGCCACTGATGCAC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGGTGTTGCCTGGCTGTaGATCAGTGGCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCGVAWL*ISGTAL
Trigger: CAGAGCAGTGCCACTGATGCACAGCCAGGCAACACC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCAGGACTTAAGGTGTTaGCTGGCTGTGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHQDLRC*LAVHQW
Trigger: CCACTGATGCACAGCCAGGCAACACCTTAAGTCCTG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCTCACATGGCCTTCCATaGCCTCCTGCGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSSHGLP*PPADSS
Trigger: ACTGGAGTCCGCAGGAGGGCATGGAAGGCCATGTGA...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTGTGTCACAGGCGCTaGACAGAGACTGATCAACAT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFLCHRR*TETDQH
Trigger: ATGTTGATCAGTCTCTGTCCAGCGCCTGTGACACAG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATAGAGCTAGAAGTCCGTaGTACACCTCGCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNRARSP*YTSRPV
Trigger: CACCGGCCGCGAGGTGTACCACGGACTTCTAGCTCT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGCTATTCTTCTCCTCTaGGCCTGCACAGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFAILLL*ACTALF
Trigger: AAAGAGTGCTGTGCAGGCCCAGAGGAGAAGAATAGC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAACGGCGCCGTACTGCCTaGCGCCTAAATGTGCTGCGT +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKRRRTA*RLNVLR
Trigger: ACGCAGCACATTTAGGCGCCAGGCAGTACGGCGCCG...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGGACTGGACTTTGACCTaGGCTGTGGACTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKDWTLT*AVDCWP
Trigger: AGGCCAGCAGTCCACAGCCCAGGTCAAAGTCCAGTC...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACGCAGGGTCCCCTTCATaGGCTATTACGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHAGSPS*AITRFF
Trigger: GAAGAACCTCGTAATAGCCCATGAAGGGGACCCTGC...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATAGTAGGAAGACTGGCTaGCTACTGAGGCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSRKTG*LLRPGQ
Trigger: CTGCCCGGGCCTCAGTAGCCAGCCAGTCTTCCTACT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGCAGGCTGGGATGCTTTaGCTGGAGCTGCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKQAGML*LELLEE
Trigger: TTCCTCCAGCAGCTCCAGCCAAAGCATCCCAGCCTG...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTGTCGATGTGGGATCTaGTACCTGGATCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSCRCGI*YLDLCC
Trigger: GCAGCAGAGATCCAGGTACCAGATCCCACATCGACA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGCTGGACAGAGACTaGTCAACATGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNALDRD*STWWWW
Trigger: CCACCACCACCATGTTGATCAGTCTCTGTCCAGCGC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACAGGATGCTCTCTATGTaGGTTGAGCTGGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHRMLSM*VELVCS
Trigger: TGAGCAGACCAGCTCAACTCACATAGAGAGCATCCT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAGACTCCTCATGCTCTaGCAGGATGCTCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSRLLML*QDALYV
Trigger: CACATAGAGAGCATCCTGTCAGAGCATGAGGAGTCT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACAGATGCAGAGGTGCTaGGACCTCTCTGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGQMQRC*DLSGCA
Trigger: TGCACAACCAGAGAGGTCTCAGCACCTCTGCATCTG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGTCCCTATGCCGGCTTaGATCAAAACTGCTAGCCCG +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCVPMPA*IKTASP
Trigger: CGGGCTAGCAGTTTTGATTCAAGCCGGCATAGGGAC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCTTGTGCTGCTCCACTaGCTGCATCTTGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSLVLLH*LHLALP
Trigger: GGGAAGAGCAAGATGCAGTCAGTGGAGCAGCACAAG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATGGTGCCATCATCCATaGCATGCCGCAGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGWCHHP*HAAEQA
Trigger: TGCTTGCTCTGCGGCATGTCATGGATGATGGCACCA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGGAGGATAAGATGTaGCAGGTGGGTGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCLEDKM*QVGGVQ
Trigger: CTGGACTCCACCCACCTGTCACATCTTATCCTCCAA...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGGGCAGGAGACTGTCTaGCCAGGCCCGACTGCACAG +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLGQETV*PGPTAQ
Trigger: CTGTGCAGTCGGGCCTGGTCAGACAGTCTCCTGCCC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGAAGCCCACGAGAGTGTaGTGTTTGCAGGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKKPTRV*CLQAGM
Trigger: CATCCCAGCCTGCAAACATCACACTCTCGTGGGCTT...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAGAACTTACCTCCACTaGCTGCATCTTGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSRTYLH*LHLALP
Trigger: GGGAAGAGCAAGATGCAGTCAGTGGAGGTAAGTTCT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439984.7
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAGACCTCTCTGGTTGTaGATCTCATCAGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCRPLWL*ISSEGV
Trigger: CACCCCCTCTGATGAGATGCACAACCAGAGAGGTCT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATTCCTGTGCGTCTCCTaGCTGACTTGTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGFLCVS*LTCGQK
Trigger: CTTCTGCCCACAAGTCAGGCAGGAGACGCACAGGAA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTTCCCCTTCAGGAAATaGAACCTGGTTTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFFPFRK*NLVWQA
Trigger: AGCTTGCCAAACCAGGTTGCATTTCCTGAAGGGGAA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCTCCTCGCTGGCTTGTaGTGCTCCACTGACTGCATC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNLLAGL*CSTDCI
Trigger: GATGCAGTCAGTGGAGCAGCACAAGCCAGCGAGGAG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCTCCCTAGATATGCCTaGCAGTCGGTGGTCATAGTC +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCLPRYA*QSVVIV
Trigger: GACTATGACCACCGACTGGCAGGCATATCTAGGGAG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCCACATCCACAGGCTTTaGTCTTCGGGAAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCHIHRL*SSGRAV
Trigger: TACTGCTCTTCCCGAAGAGCAAAGCCTGTGGATGTG...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACATATGATGGGATaGAGTCCCCAAAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIGHMMG*SPQSSP
Trigger: CGGAGAGCTTTGGGGACTGCATCCCATCATATGTCC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATTCCCTGGGTCACGTTaGTGTGGGGATTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGFPGSR*CGDCWQ
Trigger: CTGCCAACAATCCCCACAGCAACGTGACCCAGGGAA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGCCCAGGATTTCCAATaGTTCCCTGGGTCACGTTGC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGAQDFQ*FPGSRC
Trigger: GCAACGTGACCCAGGGAAGCATTGGAAATCCTGGGC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTGGGATGAATGCCGGCTaGTATAGCAGTAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSGMNAG*YSSRKT
Trigger: AGTCTTCCTACTGCTATAGCAGCCGGCATTCATCCC...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACGAGAGTGTGATGTTTaGAGGCTGGGATGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIRECDV*RLGCFG
Trigger: GCCAAAGCATCCCAGCCTGCAAACATCACACTCTCG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACAGGACTTAAGGTGTTaGCTGGCTGTGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIQDLRC*LAVHQW
Trigger: CCACTGATGCACAGCCAGGCAACACCTTAAGTCCTG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGGCAGAGGCAGAAGGATaGTGCTCAGAAGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKAEAEG*CSEAQR
Trigger: CCTCTGTGCTTCTGAGCAGCATCCTTCTGCCTCTGC...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAACAGCAATCCACCAAATaGAGAGCTGCTAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEQQSTK*RAAKQR
Trigger: CCTCTGCTTAGCAGCTCTGCATTTGGTGGATTGCTG...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGAACCAGATCCAATCTaGTTGCTTGGATCTAGACCG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFEPDPI*LLGSRP
Trigger: CGGTCTAGATCCAAGCAACCAGATTGGATCTGGTTC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTGTCACTGAAGTCCCTTaGCAAGTCCTGTCCACAAGA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSVTEVP*QVLSTR
Trigger: TCTTGTGGACAGGACTTGCCAAGGGACTTCAGTGAC...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTGGGTCACGTTGCTGTaGGGATTGTTGGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHWVTLL*GLLAVV
Trigger: AACAACTGCCAACAATCCCCACAGCAACGTGACCCA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATATTTCCAATGCTTCCCTaGGTCACGTTGCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIFPMLP*VTLLWG
Trigger: TCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAA...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGATGTGACAGGTGGGTaGAGTCCAGTTCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGDVTGG*SPVPDP
Trigger: GGGATCAGGAACTGGACTCCACCCACCTGTCACATC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGATGTGACAGGTGGGTaGAGTCCAGTTCCTGATCCC +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSDVTGG*SPVPDP
Trigger: GGGATCAGGAACTGGACTCCACCCACCTGTCACATC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGCACAAACCCAGTGGTaGACATCCGGAGGGATGAAT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCAQTQW*TSGGMN
Trigger: ATTCATCCCTCCGGATGTCCACCACTGGGTTTGTGC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTTTTGGCTGGAGCTGCTaGAGGAAGGCAGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLFGWSC*RKAGRA
Trigger: AGCACGGCCTGCCTTCCTCCAGCAGCTCCAGCCAAA...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGTGATGTTTGCAGGCTaGGATGCTTTGGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIVMFAG*DALAGA
Trigger: AGCTCCAGCCAAAGCATCCCAGCCTGCAAACATCAC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCTGGCTGTGCATCAGTaGCACTGCTCTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNLAVHQ*HCSDLP
Trigger: AGGGAGGTCAGAGCAGTGCCACTGATGCACAGCCAG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGGGCCATGTAGAGGGTaGAGGGCAGGCCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLGPCRG*RAGPAE
Trigger: TTCTGCTGGGCCTGCCCTTCACCCTCTACATGGCCC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAATGGTTCGCTGATCCGTaGACTCATTTGCAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEWFADP*THLQSY
Trigger: ATAGGACTGCAAATGAGTTCACGGATCAGCGAACCA...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAGCGCTGGACAGAGACTaGTCAACATGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKALDRD*STWWWW
Trigger: CCACCACCACCATGTTGATCAGTCTCTGTCCAGCGC...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAGCTCTCTATGTGAGTTaGGCTGGTCTGCTCACTTTT +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEALYVS*AGLLTF
Trigger: AAAAGTGAGCAGACCAGCTCAACTCACATAGAGAGC...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACGCTCTCTATGTGAGTTaGGCTGGTCTGCTCACTTTT +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHALYVS*AGLLTF
Trigger: AAAAGTGAGCAGACCAGCTCAACTCACATAGAGAGC...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAGACTCCTCATGCTCTaGCAGGATGCTCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCRLLML*QDALYV
Trigger: CACATAGAGAGCATCCTGTCAGAGCATGAGGAGTCT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGTCCCTATGCCGGCTTaGATCAAAACTGCTAGCCCG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNVPMPA*IKTASP
Trigger: CGGGCTAGCAGTTTTGATTCAAGCCGGCATAGGGAC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACAAGAGCTATCACTGCTaGACTGGTGAGCAGACTGAA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHKSYHC*TGEQTE
Trigger: TTCAGTCTGCTCACCAGTTCAGCAGTGATAGCTCTT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTATACAACACATACTTaGGGGCAGGCTGCAATACTG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFYTTHT*GQAAIL
Trigger: CAGTATTGCAGCCTGCCCTCAAGTATGTGTTGTATA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAAAGCAGAACCCCATGTaGTCTGCCATGGGGCAATAT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIKQNPM*SAMGQY
Trigger: ATATTGCCCCATGGCAGATCACATGGGGTTCTGCTT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAGTCAGAGGCAAGGATaGAACAGTCCCCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCSQRQG*NSPLYC
Trigger: ACAGTACAGGGGACTGTTTCATCCTTGCCTCTGACT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACCCGCAGCTGAAAAGTaGCCAGACCATTGCCTATCT +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGPAAEK*PDHCLS
Trigger: AGATAGGCAATGGTCTGGTCACTTTTCAGCTGCGGG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTGGTGCCATCATCCATaGCATGCCGCAGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNWCHHP*HAAEQA
Trigger: TGCTTGCTCTGCGGCATGTCATGGATGATGGCACCA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAAGCCTGTGCCAGGTTaGCACTATGAAGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCKPVPG*HYEVPD
Trigger: ATCAGGAACTTCATAGTGTCAACCTGGCACAGGCTT...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAAGCCTGTGCCAGGTTaGCACTATGAAGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSKPVPG*HYEVPD
Trigger: ATCAGGAACTTCATAGTGTCAACCTGGCACAGGCTT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTTGGAGGATAAGATGTaGCAGGTGGGTGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCLEDKM*QVGGVQ
Trigger: CTGGACTCCACCCACCTGTCACATCTTATCCTCCAA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTGGACATCCGGAGGGATaGATGCCGGCTGCTATAGCA +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLGHPEG*MPAAIA
Trigger: TGCTATAGCAGCCGGCATTCATCCCTCCGGATGTCC...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATATCGGGATTGGATGGATaGTGGCAAGTTTCGAAGCGA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHISGLDG*WQVSKR
Trigger: TCGCTTCGAAACTTGCCATCATCCATCCAATCCCGA...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACCCTGTCGGAGGATCTaGAGCGTCTGCGACCCCATC +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLPCRRI*SVCDPI
Trigger: GATGGGGTCGCAGACGCTGCAGATCCTCCGACAGGG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTCCTGGTTGAACAGTTaGCTTGTTCAGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFSWLNS*LVQLWF
Trigger: GAACCAAAGCTGAACAAGGCAACTGTTCAACCAGGA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTGATCACTCGGTCCATTaGTGTCTTTTCTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSDHSVH*CLFSWL
Trigger: CAACCAGGAGAAAAGACAGCAATGGACCGAGTGATC...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAACATGCTCTGACAGGATaGTCTCTATGTGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEHALTG*SLCELS
Trigger: GCTCAACTCACATAGAGAGCATCCTGTCAGAGCATG...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTGTGTTGCACGCTTTTTaGTGGTTCCTTCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSVLHAF*WFLQEP
Trigger: TGGTTCCTGAAGGAACCAGCAAAAAGCGTGCAACAC...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTCAAACATGCTACTGTaGCACTGTCCAGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHSNMLL*HCPGST
Trigger: TGTTGAGCCTGGACAGTGGCACAGTAGCATGTTTGA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTCCCCTTCAGGAAATaGAACCTGGTTTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSFPFRK*NLVWQA
Trigger: AGCTTGCCAAACCAGGTTGCATTTCCTGAAGGGGAA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCCACTGACTGCATCTTaGTCTTCCCCTTCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSPLTAS*SSPSGN
Trigger: ATTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCCACTGACTGCATCTTaGTCTTCCCCTTCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHPLTAS*SSPSGN
Trigger: ATTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCCTCCCTAGATATGCCTaGCAGTCGGTGGTCATAGTC +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCLPRYA*QSVVIV
Trigger: GACTATGACCACCGACTGGCAGGCATATCTAGGGAG...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCTCCCTAGATATGCCTaGCAGTCGGTGGTCATAGTC +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSLPRYA*QSVVIV
Trigger: GACTATGACCACCGACTGGCAGGCATATCTAGGGAG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGGACATATGATGGGATaGAGTCCCCAAAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSGHMMG*SPQSSP
Trigger: CGGAGAGCTTTGGGGACTGCATCCCATCATATGTCC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCCATCATCCATGACATaGCGCAGAGCAAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSPSSMT*RRASKE
Trigger: CTCCTTGCTTGCTCTGCGGCATGTCATGGATGATGG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTCTCAGGGCTTGCTTTaGATTTTGGATGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFSQGLL*ILDATS
Trigger: AGAGGTAGCATCCAAAATGCAAAGCAAGCCCTGAGA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACCAGTTCCTGATCCCTaGCCAGGATTTCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIPVPDP*PGFPML
Trigger: AAGCATTGGAAATCCTGGGCAGGGATCAGGAACTGG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCCAGTTCCTGATCCCTaGCCAGGATTTCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCPVPDP*PGFPML
Trigger: AAGCATTGGAAATCCTGGGCAGGGATCAGGAACTGG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGGGATGAATGCCGGCTaGTATAGCAGTAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCGMNAG*YSSRKT
Trigger: AGTCTTCCTACTGCTATAGCAGCCGGCATTCATCCC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCTGGACCAGAAGCACTaGCTTGTCGATGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSLDQKH*LVDVGS
Trigger: AGATCCCACATCGACAAGGCAGTGCTTCTGGTCCAG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCAGGGCAAAGGAGAGGTaGTTAACCAAGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFRAKER*LTKLIL
Trigger: TAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCT...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAAGGAACTGCAACCAACTaGGGGTGTGGCCTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKEGTATN*GCGLSD
Trigger: ATCCGAGAGGCCACACCCCCAGTTGGTTGCAGTTCC...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCAGAGCTAGAAGTCCGTaGTACACCTCGCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGRARSP*YTSRPV
Trigger: CACCGGCCGCGAGGTGTACCACGGACTTCTAGCTCT...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCCACCAAGGATTCTTTaGATCCAGAAAGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHPPRIL*IQKEAW
Trigger: CCAAGCCTCTTTCTGGATCCAAAGAATCCTTGGTGG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACTCTCATCAGAGGGGGTaGGGTCCTTGGCCTCGTGAA +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHSHQRG*GPWPRE
Trigger: TTCACGAGGCCAAGGACCCCACCCCCTCTGATGAGA...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTGTGTCACAGATATTaGATGCTCTTCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFLCHRY*MLFLLL
Trigger: CAGCAGCAAGAAGAGCATCCAATATCTGTGACACAG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGGGCAGCTTCTTCTGTTaGGCCGTAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKGSFFC*AVSSCQ
Trigger: TTGGCAGCTACTTACGGCCCAACAGAAGAAGCTGCC...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAATGCCAATCCACAGCTaGGGTAGGATCCAAAAGCGA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIMPIHS*GRIQKR
Trigger: TCGCTTTTGGATCCTACCCCAGCTGTGGATTGGCAT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGCAGGGTCCCCTTCATaGGCTATTACGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCAGSPS*AITRFF
Trigger: GAAGAACCTCGTAATAGCCCATGAAGGGGACCCTGC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGCAGGGTCCCCTTCATaGGCTATTACGAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGAGSPS*AITRFF
Trigger: GAAGAACCTCGTAATAGCCCATGAAGGGGACCCTGC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTGGGTCACGTTGCTGTaGGGATTGTTGGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCWVTLL*GLLAVV
Trigger: AACAACTGCCAACAATCCCCACAGCAACGTGACCCA...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTTTCCAATGCTTCCCTaGGTCACGTTGCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCFPMLP*VTLLWG
Trigger: TCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCACAGTCGGGATTGGATaGATGATGGCAAGTTTCGAA +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFTVGIG*MMASFE
Trigger: TTCGAAACTTGCCATCATCCATCCAATCCCGACTGT...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCATCGACAGTCGGGATTaGATGGATGATGGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFIDSRD*MDDGKF
Trigger: AAACTTGCCATCATCCATCCAATCCCGACTGTCGAT...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCCTGAGGGTTCCATTTaGTTCACCATCGACAGTCGG +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSPEGSI*FTIDSR
Trigger: CCGACTGTCGATGGTGAACCAAATGGAACCCTCAGG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCACTGCCTTGTCGATGTaGGATCTGGTACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCTALSM*DLVPGS
Trigger: AGATCCAGGTACCAGATCCCACATCGACAAGGCAGT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGAGAAGCAGAGCACATaGGCTCCTCTGAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIEKQST*APLRCR
Trigger: TCTACATCTCAGAGGAGCCCATGTGCTCTGCTTCTC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATATCAGCTTTGGTTCGCTaGTCCGTGAACTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHISALVR*SVNSFA
Trigger: TGCAAATGAGTTCACGGATCAGCGAACCAAAGCTGA...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGTGTGGCCTCTCGGATaGACTCAGACATTTCAATCC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGVWPLG*TQTFQS
Trigger: GGATTGAAATGTCTGAGTTCATCCGAGAGGCCACAC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTGGTGGTGGTGGTTATaGCTTGGCAGGTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCWWWWL*LGRFTL
Trigger: CAAAGTGAACCTGCCAAGTCATAACCACCACCACCA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCAGTAGCTTTCTGTTaGCCCACTACTCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNAVAFC*PTTPCA
Trigger: AGCACACGGAGTAGTGGGTCAACAGAAAGCTACTGC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACCAGATGCAGAGGTGCTaGGACCTCTCTGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHQMQRC*DLSGCA
Trigger: TGCACAACCAGAGAGGTCTCAGCACCTCTGCATCTG...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAAGAGCTATCACTGCTaGACTGGTGAGCAGACTGAA +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCKSYHC*TGEQTE
Trigger: TTCAGTCTGCTCACCAGTTCAGCAGTGATAGCTCTT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGTGCCCCTTTCTTTATaGGTGTGTTTGGTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFVPLSL*VCLVFR
Trigger: TCTAAAGACCAAACACACTCATAAAGAAAGGGGCAC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCACTGCTTTGTCGGCTaGGATGGTAAGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNHCFVG*DGKTLP
Trigger: TGGCAGTGTCTTACCATCTCAGCCGACAAAGCAGTG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGGCACTGCAAAAGGCTaGGCAAAAGCATGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCGTAKG*AKAWKA
Trigger: TGCTTTCCATGCTTTTGCTCAGCCTTTTGCAGTGCC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCCGAGACAGCAGCCTaGATAAACAGCATGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNAETAA*INSMAE
Trigger: TTCAGCCATGCTGTTTATTCAGGCTGCTGTCTCGGC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGACAGTAGGTACCTCTaGATTCAAGTCCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNDSRYL*IQVPAA
Trigger: AGCTGCGGGGACTTGAATTCAGAGGTACCTACTGTC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATCGGGATTGGATGGATaGTGGCAAGTTTCGAAGCGA +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGSGLDG*WQVSKR
Trigger: TCGCTTCGAAACTTGCCATCATCCATCCAATCCCGA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCACATAGGATCAAAGTaGTACCTGCAGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHHIGSK*YLQASS
Trigger: AGAAGATGCCTGCAGGTATCACTTTGATCCTATGTG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCATATAACCTTGTGGTaGCAATCAGCTCTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFHITLW*QSALVP
Trigger: TGGAACTAGAGCTGATTGTCACCACAAGGTTATATG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATATCACTACTCTGTTGTaGATTCCGGGGCACCACCTC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNITTLL*IPGHHL
Trigger: GAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGAT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAATCCTTTAATAGTTGCTaGTGTTCCAAGACGCGAGGA +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQESFNSC*CSKTRG
Trigger: TCCTCGCGTCTTGGAACAGCAGCAACTATTAAAGGA...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTACCCACTACTCCGTGTaGTCAGGCTCCTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLTHYSV*SGSSSC
Trigger: ACAGCTTGAGGAGCCTGAGCACACGGAGTAGTGGGT...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCCCACTTTTTGTTCCTaGTTTAGGAGACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSPTFCS*FRRLLM
Trigger: CATGAGGAGTCTCCTAAAGCAGGAACAAAAAGTGGG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCAGAAGTCCGTCGTGTTaGACGCTTTTTGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCRSPSC*TLFAGS
Trigger: GGAACCAGCAAAAAGCGTGCAACACGACGGACTTCT...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTTACCAAGTTCATCGTaGAAACTGCTACCGCCTACA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHLPSSS*KLLPPT
Trigger: TGTAGGCGGTAGCAGTTTGCACGATGAACTTGGTAA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAATTGCAGTCAGGTTTCTaGTACCATAATCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQELQSGF*YHNPRA
Trigger: GGCTCTTGGATTATGGTAGCAGAAACCTGACTGCAA...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTGCAGTCAGGTTTCTaGTACCATAATCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSLQSGF*YHNPRA
Trigger: GGCTCTTGGATTATGGTAGCAGAAACCTGACTGCAA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCACATCCACAGGCTTTaGTCTTCGGGAAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSHIHRL*SSGRAV
Trigger: TACTGCTCTTCCCGAAGAGCAAAGCCTGTGGATGTG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGGACATATGATGGGATaGAGTCCCCAAAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNGHMMG*SPQSSP
Trigger: CGGAGAGCTTTGGGGACTGCATCCCATCATATGTCC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATACTGCACTCCGCCATaGAGGGTCCCCTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLYCTPP*RVPFMG
Trigger: GCCCATGAAGGGGACCCTGCATGGCGGAGTGCAGTA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTAGAGTTGGCAAGTACTaGACTCCGCCATGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLRVGKY*TPPCRV
Trigger: GACCCTGCATGGCGGAGTGCAGTACTTGCCAACTCT...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACCTTTCCTAAGCCTGTaGCAGGTTGACACTATGAAG +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIPFLSL*QVDTMK
Trigger: CTTCATAGTGTCAACCTGGCACAGGCTTAGGAAAGG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGTTGCATTGTTACCAGTaGAGGAAGTCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKLHCYQ*RKSHLQ
Trigger: CTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAA...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATTGCATTGTTACCAGTaGAGGAAGTCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGLHCYQ*RKSHLQ
Trigger: CTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGGGATGAATGCCGGCTaGTATAGCAGTAGGAAGACT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSGMNAG*YSSRKT
Trigger: AGTCTTCCTACTGCTATAGCAGCCGGCATTCATCCC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCGAGAGTGTGATGTTTaGAGGCTGGGATGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNRECDV*RLGCFG
Trigger: GCCAAAGCATCCCAGCCTGCAAACATCACACTCTCG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCATCTTTACGCACTTTaGAATCCACAGAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFHLYAL*NPQKQL
Trigger: CAGCTGTTTCTGTGGATTCCAAAGTGCGTAAAGATG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGCACCTCTCCCTCTTTaGCCTCAAGATCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCAPLPL*PQDLIL
Trigger: CAAAATCAGATCTTGAGGCCAAAGAGGGAGAGGTGC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGGCAGCTTCTTCTGTTaGGCCGTAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNGSFFC*AVSSCQ
Trigger: TTGGCAGCTACTTACGGCCCAACAGAAGAAGCTGCC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCATGCCAATCCACAGCTaGGGTAGGATCCAAAAGCGA +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSMPIHS*GRIQKR
Trigger: TCGCTTTTGGATCCTACCCCAGCTGTGGATTGGCAT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCATGCCAATCCACAGCTaGGGTAGGATCCAAAAGCGA +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCMPIHS*GRIQKR
Trigger: TCGCTTTTGGATCCTACCCCAGCTGTGGATTGGCAT...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGGGAGAAGAAGAATCTaGTTGAACACTCTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFGRRRI*LNTLKQ
Trigger: CTGCTTAAGAGTGTTCAACCAGATTCTTCTTCTCCC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGTCTTCATCAATGTTTaGATTAAAGGTCGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFVFINV*IKGRVH
Trigger: GTGGACCCGACCTTTAATCCAAACATTGATGAAGAC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAATGCTGTGGGGATTGTTaGCAGTTGTTGCATTGTTAC +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQECCGDC*QLLHCY
Trigger: GTAACAATGCAACAACTGCCAACAATCCCCACAGCA...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAGTAGGAAGACTGGCTaGCTACTGAGGCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLSRKTG*LLRPGQ
Trigger: CTGCCCGGGCCTCAGTAGCCAGCCAGTCTTCCTACT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCACAAACCCAGTGGTaGACATCCGGAGGGATGAAT +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNAQTQW*TSGGMN
Trigger: ATTCATCCCTCCGGATGTCCACCACTGGGTTTGTGC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTACAGTCGGGATTGGATaGATGATGGCAAGTTTCGAA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSTVGIG*MMASFE
Trigger: TTCGAAACTTGCCATCATCCATCCAATCCCGACTGT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCCTGGGATGCTTTGGCTaGAGCTGCTGGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGLGCFG*SCWRKA
Trigger: TGCCTTCCTCCAGCAGCTCCAGCCAAAGCATCCCAG...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTGGAGTGTGAATTGTTaGCAGGACTTAAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHWSVNC*QDLRCC
Trigger: GCAACACCTTAAGTCCTGCCAACAATTCACACTCCA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTCACTTCTGCCTTTCTaGAGTGTGAATTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSSLLPF*SVNCWQ
Trigger: CTGCCAACAATTCACACTCCAGAAAGGCAGAAGTGA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTCACTTCTGCCTTTCTaGAGTGTGAATTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHSLLPF*SVNCWQ
Trigger: CTGCCAACAATTCACACTCCAGAAAGGCAGAAGTGA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTGTCGATGTGGGATCTaGTACCTGGATCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNCRCGI*YLDLCC
Trigger: GCAGCAGAGATCCAGGTACCAGATCCCACATCGACA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCACTGCCTTGTCGATGTaGGATCTGGTACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSTALSM*DLVPGS
Trigger: AGATCCAGGTACCAGATCCCACATCGACAAGGCAGT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAATCACTCACTATTCTCTaGGGGGTGAGGGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKSLTIL*GVRGEA
Trigger: TGCCTCACCCCTCACCCCCCAGAGAATAGTGAGTGA...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCTCAGCTTTGGTTCGCTaGTCCGTGAACTCATTTGCA +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSSALVR*SVNSFA
Trigger: TGCAAATGAGTTCACGGATCAGCGAACCAAAGCTGA...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGTCTTTTCTCCTGGTTaGACAGTTGCCTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSVFSPG*TVALFS
Trigger: GCTGAACAAGGCAACTGTTCAACCAGGAGAAAAGAC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGTCTTTTCTCCTGGTTaGACAGTTGCCTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGVFSPG*TVALFS
Trigger: GCTGAACAAGGCAACTGTTCAACCAGGAGAAAAGAC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACGTGGCTGAGAAGTATTaGTTTTCAAGTCACCAGCAA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHVAEKY*FSSHQQ
Trigger: TTGCTGGTGACTTGAAAATCAATACTTCTCAGCCAC...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTTTTTGTGGGTGGCTaGGAAGTATTGATTTTCAAG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFLFVGG*EVLIFK
Trigger: CTTGAAAATCAATACTTCTCAGCCACCCACAAAAAG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACGTCTACTGTAGGCAATaGTACGATTATGACCATGTC +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHVYCRQ*YDYDHV
Trigger: GACATGGTCATAATCGTATCATTGCCTACAGTAGAC...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTCACTGCTTTGTCGGCTaGGATGGTAAGACACTGCCA +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLHCFVG*DGKTLP
Trigger: TGGCAGTGTCTTACCATCTCAGCCGACAAAGCAGTG...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAATCAAGTCCCCGCAGCTaGAAAGTGACCAGACCATTG +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKESSPRS*KVTRPL
Trigger: CAATGGTCTGGTCACTTTTCAGCTGCGGGGACTTGA...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTGACAGTAGGTACCTCTaGATTCAAGTCCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLDSRYL*IQVPAA
Trigger: AGCTGCGGGGACTTGAATTCAGAGGTACCTACTGTC...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCAGCACTGTTATCAGTaGTGCTATAACCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCQHCYQ*CYNPPE
Trigger: TTCTGGAGGGTTATAGCATCACTGATAACAGTGCTG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTTTGGAGGATAAGATGTaGCAGGTGGGTGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLLEDKM*QVGGVQ
Trigger: CTGGACTCCACCCACCTGTCACATCTTATCCTCCAA...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTTTCGAAGCGATATCTaGCTAGTAGAAGAGCGCCGA +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCFRSDI*LVEERR
Trigger: TCGGCGCTCTTCTACTAGTCAGATATCGCTTCGAAA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATTTCGAAGCGATATCTaGCTAGTAGAAGAGCGCCGA +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGFRSDI*LVEERR
Trigger: TCGGCGCTCTTCTACTAGTCAGATATCGCTTCGAAA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCAGTGGCACTGCTCTaGCCTCCCTCTGTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLSVALL*PPSVAR
Trigger: TCTTGCGACAGAGGGAGGTCAGAGCAGTGCCACTGA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCATCACAGTGTTAGATaGCCTTTGTTCCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHHHSVR*PLFLLA
Trigger: AGCTAGAAGGAACAAAGGTCATCTAACACTGTGATG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAACTTTCCAGAGCCCATaGTCAGAAAAGGAAAACCCA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHITFQSP*SEKENP
Trigger: TGGGTTTTCCTTTTCTGATCATGGGCTCTGGAAAGT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGCAGATCCAATCTGGTTaGTTGGATCTAGACCGGCAT +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKQIQSG*LDLDRH
Trigger: ATGCCGGTCTAGATCCAAGCAACCAGATTGGATCTG...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCAGATCCAATCTGGTTaGTTGGATCTAGACCGGCAT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSQIQSG*LDLDRH
Trigger: ATGCCGGTCTAGATCCAAGCAACCAGATTGGATCTG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACATGCTCTGACAGGATaGTCTCTATGTGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGHALTG*SLCELS
Trigger: GCTCAACTCACATAGAGAGCATCCTGTCAGAGCATG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCATTGGCTTCTTCAGATaGAGAGGTGCTGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSIGFFR*RGAETS
Trigger: AGAGGTCTCAGCACCTCTGCATCTGAAGAAGCCAAT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCCACATCATAGTGGCTaGATTTCGAACTTCATACTG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSPHHSG*ISNFIL
Trigger: CAGTATGAAGTTCGAAATGCAGCCACTATGATGTGG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAAGACGAAGTCCTTCCTaGATTGTCTCATTAGCTAGC +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIRRSPS*IVSLAS
Trigger: GCTAGCTAATGAGACAATGCAGGAAGGACTTCGTCT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTACTGCACTCCGCCATaGAGGGTCCCCTTCATGGGC +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYYCTPP*RVPFMG
Trigger: GCCCATGAAGGGGACCCTGCATGGCGGAGTGCAGTA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCAGAAAAACAAGCTCCTaGTGTTGCCCTGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCRKTSS*CCPAQR
Trigger: TCTTTGGGCAGGGCAACAGCAGGAGCTTGTTTTTCT...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAGAAAAACAAGCTCCTaGTGTTGCCCTGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSRKTSS*CCPAQR
Trigger: TCTTTGGGCAGGGCAACAGCAGGAGCTTGTTTTTCT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGCTTTGCATTTTGGATaGTACCTCTCTCTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIALHFG*YLSLGY
Trigger: GTAACCCAGAGAGAGGTAGCATCCAAAATGCAAAGC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCTTCCCTGGGTCACGTTaGTGTGGGGATTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGFPGSR*CGDCWQ
Trigger: CTGCCAACAATCCCCACAGCAACGTGACCCAGGGAA...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAACGAGAGTGTGATGTTTaGAGGCTGGGATGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKERECDV*RLGCFG
Trigger: GCCAAAGCATCCCAGCCTGCAAACATCACACTCTCG...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCACATGGCCTTCCATaGCCTCCTGCGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLSHGLP*PPADSS
Trigger: ACTGGAGTCCGCAGGAGGGCATGGAAGGCCATGTGA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAGATCAAAGTGATACCTaGAGGCATCTTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEDQSDT*RHLLLV
Trigger: AACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGGAGCAGCCATCTTATaGTCTATCACTACTCTGTTG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCGAAIL*SITTLL
Trigger: CAACAGAGTAGTGATAGAGCATAAGATGGCTGCTCC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCGGCATAAGAATTTCTaGAACTGCAACCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSRHKNF*NCNQLG
Trigger: CCCCAGTTGGTTGCAGTTCCAGAAATTCTTATGCCG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGAACCAGATCCAATCTaGTTGCTTGGATCTAGACCG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGEPDPI*LLGSRP
Trigger: CGGTCTAGATCCAAGCAACCAGATTGGATCTGGTTC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCCCACTTTTTGTGGGTaGCTGAGAAGTATTGATTTT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFPTFCG*LRSIDF
Trigger: AAAATCAATACTTCTCAGCCACCCACAAAAAGTGGG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGCACCTCTCCCTCTTTaGCCTCAAGATCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGAPLPL*PQDLIL
Trigger: CAAAATCAGATCTTGAGGCCAAAGAGGGAGAGGTGC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGTGACTGTCTCTAACTaGGAAGCCCGTCCTAATAAA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIVTVSN*EARPNK
Trigger: TTTATTAGGACGGGCTTCCCAGTTAGAGACAGTCAC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAAATGCAACCTGGTTTaGCAAGCTATTCCTAGATCG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSKCNLV*QAIPRS
Trigger: CGATCTAGGAATAGCTTGCCAAACCAGGTTGCATTT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTCAGGAAATGCAACCTaGTTTGGCAAGCTATTCCTA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHSGNAT*FGKLFL
Trigger: TAGGAATAGCTTGCCAAACCAGGTTGCATTTCCTGA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCGGGAGAAGAAGAATCTaGTTGAACACTCTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCGRRRI*LNTLKQ
Trigger: CTGCTTAAGAGTGTTCAACCAGATTCTTCTTCTCCC...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAATGGAGAAAAGTACTaGAATATGCTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSNGEKY*NMLAIP
Trigger: TGGGATGGCCAGCATATTCCAGTACTTTTCTCCATT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGGATTTCTATCAAGCTaGGAAGCCAATCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFGFLSS*EANLVF
Trigger: AAATACCAGATTGGCTTCCCAGCTTGATAGAAATCC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCAAGCTAGCCATCGCTaGCTAAATGCAGCATTAAAT +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHQASHR*LNAALN
Trigger: ATTTAATGCTGCATTTAGCCAGCGATGGCTAGCTTG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATAGTAGGAAGACTGGCTaGCTACTGAGGCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYSRKTG*LLRPGQ
Trigger: CTGCCCGGGCCTCAGTAGCCAGCCAGTCTTCCTACT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAACAGTCGGGATTGGATaGATGATGGCAAGTTTCGAA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHITVGIG*MMASFE
Trigger: TTCGAAACTTGCCATCATCCATCCAATCCCGACTGT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCATCGACAGTCGGGATTaGATGGATGATGGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCIDSRD*MDDGKF
Trigger: AAACTTGCCATCATCCATCCAATCCCGACTGTCGAT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTCCTGAGGGTTCCATTTaGTTCACCATCGACAGTCGG +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLPEGSI*FTIDSR
Trigger: CCGACTGTCGATGGTGAACCAAATGGAACCCTCAGG...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCTTCCAGAATTTGACTaGGATCCACAATTTGGACTC +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHLPEFD*DPQFGL
Trigger: GAGTCCAAATTGTGGATCCCAGTCAAATTCTGGAAG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGAACCCAAGAGTCATCTaGAGCAGCCATCTTATGCTC +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKNPRVI*SSHLML
Trigger: GAGCATAAGATGGCTGCTCCAGATGACTCTTGGGTT...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGGGAAAATCATTCAGTaGAGTGTCTGGAAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGGKIIQ*SVWKSH
Trigger: GTGGCTTTTCCAGACACTTCACTGAATGATTTTCCC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACTACTCAAGTCACTCTaGTCACTAGAGTCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGLLKSL*SLESSS
Trigger: TGACGAAGACTCTAGTGATCAGAGTGACTTGAGTAG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAACAAATGTATTCACCTaGGGCAGGAGACCAATGAAA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHITNVFT*GRRPMK
Trigger: TTTCATTGGTCTCCTGCCTCAGGTGAATACATTTGT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTATACAACACATACTTaGGGGCAGGCTGCAATACTG +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCYTTHT*GQAAIL
Trigger: CAGTATTGCAGCCTGCCCTCAAGTATGTGTTGTATA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAAAAAGAAGCCACACATaGAGTTTCTCAAACCACATC +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEKRSHT*SFSNHI
Trigger: GATGTGGTTTGAGAAACTTCATGTGTGGCTTCTTTT...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACAAAAGAAGCCACACATaGAGTTTCTCAAACCACATC +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHKRSHT*SFSNHI
Trigger: GATGTGGTTTGAGAAACTTCATGTGTGGCTTCTTTT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCAACAGCATGGTCTCTaGAAAAGCTTCATAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSQQHGL*KSFIVK
Trigger: TTTGACTATGAAGCTTTTTCAGAGACCATGCTGTTG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAGCCAATCTGGTATTTaGATGATCCACTCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSSQSGI*MIHSFC
Trigger: ACAAAACGAGTGGATCATTCAAATACCAGATTGGCT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAAGTCAGAGGCAAGGATaGAACAGTCCCCTGTACTGT +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKSQRQG*NSPLYC
Trigger: ACAGTACAGGGGACTGTTTCATCCTTGCCTCTGACT...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGGTGTACTAATGCATTaGGATAGTCAGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCGVLMH*DSQRQG
Trigger: TCCTTGCCTCTGACTATCTCAATGCATTAGTACACC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTTAAATGAAAGCATGTaGGGAATATGGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHLNESM*GIWPGS
Trigger: TGAACCTGGCCATATTCCTCACATGCTTTCATTTAA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCAGCACTGTTATCAGTaGTGCTATAACCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSQHCYQ*CYNPPE
Trigger: TTCTGGAGGGTTATAGCATCACTGATAACAGTGCTG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACAGTACTCTATCCAGTTaGGGTAAATCACACAGAAAC +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHSTLSS*GKSHRN
Trigger: GTTTCTGTGTGATTTACCTCAACTGGATAGAGTACT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAAATTACTGGACATATaGTGGGATGCAGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCKLLDI*WDAVPK
Trigger: TTTGGGGACTGCATCCCATCATATGTCCAGTAATTT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCATCCCTTCCAGAATTTaGCTGGGATCCACAATTTGG +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCIPSRI*LGSTIW
Trigger: CCAAATTGTGGATCCCAGTCAAATTCTGGAAGGGAT...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAATCCCTTCCAGAATTTaGCTGGGATCCACAATTTGG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGIPSRI*LGSTIW
Trigger: CCAAATTGTGGATCCCAGTCAAATTCTGGAAGGGAT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCACATAGGATCAAAGTaGTACCTGCAGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSHIGSK*YLQASS
Trigger: AGAAGATGCCTGCAGGTATCACTTTGATCCTATGTG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACACATAGGATCAAAGTaGTACCTGCAGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGHIGSK*YLQASS
Trigger: AGAAGATGCCTGCAGGTATCACTTTGATCCTATGTG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCACTTTAGACACTGGGTaGATCTTCAGCTTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCTLDTG*IFSLKG
Trigger: GCCTTTTAAGCTGAAGATTCACCCAGTGTCTAAAGT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACCCGGTCCGTTCCACTaGAGTAGCTTTCTGTTGACC +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLPGPFH*SSFLLT
Trigger: GGTCAACAGAAAGCTACTGCAGTGGAACGGACCGGG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAATTAGAGCACTGTATCTaGCCTCAGGAGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKLEHCI*PQETDR
Trigger: CCTGTCAGTCTCCTGAGGGCAGATACAGTGCTCTAA...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAGTTCATCGTGCAAACTaGTACCGCCTACAGCAGATG +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKVHRAN*YRLQQM
Trigger: CATCTGCTGTAGGCGGTAGCAGTTTGCACGATGAAC...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGGTCACAGATATTGGATaGTCTTCTTGCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKVTDIG*SSCCWF
Trigger: GAACCAGCAGCAAGAAGAGCATCCAATATCTGTGAC...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACCACATCGACATAATTaGGATCAGCACACAGACGAA +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGPHRHN*DQHTDE
Trigger: TTCGTCTGTGTGCTGATCGCAATTATGTCGATGTGG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAGAGTTGGCAAGTACTaGACTCCGCCATGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLRVGKY*TPPCRV
Trigger: GACCCTGCATGGCGGAGTGCAGTACTTGCCAACTCT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGCTTTGCATTTTGGATaGTACCTCTCTCTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSALHFG*YLSLGY
Trigger: GTAACCCAGAGAGAGGTAGCATCCAAAATGCAAAGC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGCTTTGCATTTTGGATaGTACCTCTCTCTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGALHFG*YLSLGY
Trigger: GTAACCCAGAGAGAGGTAGCATCCAAAATGCAAAGC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCTCTCAGGGCTTGCTTTaGATTTTGGATGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSSQGLL*ILDATS
Trigger: AGAGGTAGCATCCAAAATGCAAAGCAAGCCCTGAGA...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCAGAATCTTCAATATTaGCACCACTGTTACATCCAG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSQNLQY*HHCYIQ
Trigger: CTGGATGTAACAGTGGTGGCAATATTGAAGATTCTG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGCCCAGGATTTCCAATaGTTCCCTGGGTCACGTTGC +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLAQDFQ*FPGSRC
Trigger: GCAACGTGACCCAGGGAAGCATTGGAAATCCTGGGC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTCACATGGCCTTCCATaGCCTCCTGCGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYSHGLP*PPADSS
Trigger: ACTGGAGTCCGCAGGAGGGCATGGAAGGCCATGTGA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGATCAAAGTGATACCTaGAGGCATCTTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCDQSDT*RHLLLV
Trigger: AACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAAGGGCAAAGGAGAGGTaGTTAACCAAGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGRAKER*LTKLIL
Trigger: TAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTATAAGACGGCCTGGGTaGATATCAATCAACCAAATT +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSIRRPG*ISINQI
Trigger: AATTTGGTTGATTGATATGCACCCAGGCCGTCTTAT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACGTCACTGAAGTCCCTTaGCAAGTCCTGTCCACAAGA +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHVTEVP*QVLSTR
Trigger: TCTTGTGGACAGGACTTGCCAAGGGACTTCAGTGAC...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGGTGGTGGTTATGACTTaGCAGGTTCACTTTGTCACT +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKVVVMT*QVHFVT
Trigger: AGTGACAAAGTGAACCTGCCAAGTCATAACCACCAC...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGTGGTGGTTATGACTTaGCAGGTTCACTTTGTCACT +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCVVVMT*QVHFVT
Trigger: AGTGACAAAGTGAACCTGCCAAGTCATAACCACCAC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACATGGGGATTTTTATTaGCTTCTTCAGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIHGDFY*LLQMQR
Trigger: CCTCTGCATCTGAAGAAGCCAATAAAAATCCCCATG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGCAGTGTTCCCAGGTaGTCTGTCCCCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLCSVPR*SVPLGS
Trigger: ACTTCCCAAGGGGACAGACCACCTGGGAACACTGCA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAAAATATAGCACTGTGTaGCTTGGTACCAGAAACACC +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIKYSTV*LGTRNT
Trigger: GGTGTTTCTGGTACCAAGCCACACAGTGCTATATTT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATATCAGGAAATGCAACCTaGTTTGGCAAGCTATTCCTA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHISGNAT*FGKLFL
Trigger: TAGGAATAGCTTGCCAAACCAGGTTGCATTTCCTGA...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCTGTGATGCTTCTAAGTaGACACTCCCATTTCTCACC +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSCDASK*TLPFLT
Trigger: GGTGAGAAATGGGAGTGTCCACTTAGAAGCATCACA...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAATGGAGAAAAGTACTaGAATATGCTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCNGEKY*NMLAIP
Trigger: TGGGATGGCCAGCATATTCCAGTACTTTTCTCCATT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCCATGTGATCTGCCATaGGGCAATATAGGTATACAC +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSPCDLP*GNIGIH
Trigger: GTGTATACCTATATTGCCCCATGGCAGATCACATGG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAGGATTTCTATCAAGCTaGGAAGCCAATCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEGFLSS*EANLVF
Trigger: AAATACCAGATTGGCTTCCCAGCTTGATAGAAATCC...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCATGACTCTAAATTACTaGACATATGATGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFMTLNY*TYDGMQ
Trigger: CTGCATCCCATCATATGTCCAGTAATTTAGAGTCAT...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATGCTGTGGGGATTGTTaGCAGTTGTTGCATTGTTAC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGCCGDC*QLLHCY
Trigger: GTAACAATGCAACAACTGCCAACAATCCCCACAGCA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAATGGGTCACGTTGCTGTaGGGATTGTTGGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKWVTLL*GLLAVV
Trigger: AACAACTGCCAACAATCCCCACAGCAACGTGACCCA...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCTTTATAATAAACACTaGCTCACACTTCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSLYNKH*LTLQPQ
Trigger: TTGGGGCTGAAGTGTGAGCCAGTGTTTATTATAAAG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATAAGTCACCAGCAAGCTaGAATTCCCCAGATAAACCA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNKSPAS*NSPDKP
Trigger: TGGTTTATCTGGGGAATTTCAGCTTGCTGGTGACTT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGTCTACTGTAGGCAATaGTACGATTATGACCATGTC +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCVYCRQ*YDYDHV
Trigger: GACATGGTCATAATCGTATCATTGCCTACAGTAGAC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATATGCTGCTCAGTTCATTaGGAACAATCAATGGATAGA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHICCSVH*EQSMDR
Trigger: TCTATCCATTGATTGTTCTCAATGAACTGAGCAGCA...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTCAAACCAGCAACAGTaGTCATTAAAGCACCTAATT +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSSNQQQ*SLKHLI
Trigger: AATTAGGTGCTTTAATGATCACTGTTGCTGGTTTGA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATGACTGTAACATACTaGTATGTAGGGCTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHMTVTY*YVGLLK
Trigger: TTTTAGCAGCCCTACATATCAGTATGTTACAGTCAT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCAACAGCATGGTCTCTaGAAAAGCTTCATAGTCAAA +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCQQHGL*KSFIVK
Trigger: TTTGACTATGAAGCTTTTTCAGAGACCATGCTGTTG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACAACAGCATGGTCTCTaGAAAAGCTTCATAGTCAAA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIQQHGL*KSFIVK
Trigger: TTTGACTATGAAGCTTTTTCAGAGACCATGCTGTTG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGCACAGGTCGGACATATaGAGTGATGAATATTGCACT +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKHRSDI*SDEYCT
Trigger: AGTGCAATATTCATCACTTCATATGTCCGACCTGTG...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACACAGGTCGGACATATaGAGTGATGAATATTGCACT +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGHRSDI*SDEYCT
Trigger: AGTGCAATATTCATCACTTCATATGTCCGACCTGTG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAAGCCAATCTGGTATTTaGATGATCCACTCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHISQSGI*MIHSFC
Trigger: ACAAAACGAGTGGATCATTCAAATACCAGATTGGCT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCAGATTGTTGTCATCTaGTCCTGGATTTCTATCAAG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCQIVVI*SWISIK
Trigger: CTTGATAGAAATCCAGGATCAGATGACAACAATCTG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAAGTACTCTATCCAGTTaGGGTAAATCACACAGAAAC +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHISTLSS*GKSHRN
Trigger: GTTTCTGTGTGATTTACCTCAACTGGATAGAGTACT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATAAGCCCACGAGAGTGTaGTGTTTGCAGGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYKPTRV*CLQAGM
Trigger: CATCCCAGCCTGCAAACATCACACTCTCGTGGGCTT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCACAAGACCGATCCGCTaGCTATTGGCTCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGTRPIR*LLALGN
Trigger: ATTTCCCAGAGCCAATAGTCAGCGGATCGGTCTTGT...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTGATCACTCGGTCCATTaGTGTCTTTTCTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLDHSVH*CLFSWL
Trigger: CAACCAGGAGAAAAGACAGCAATGGACCGAGTGATC...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTCCTTTAATAGTTGCTaGTGTTCCAAGACGCGAGGA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSFNSC*CSKTRG
Trigger: TCCTCGCGTCTTGGAACAGCAGCAACTATTAAAGGA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCCCACTTTTTGTTCCTaGTTTAGGAGACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNPTFCS*FRRLLM
Trigger: CATGAGGAGTCTCCTAAAGCAGGAACAAAAAGTGGG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTTCCTGTGCGTCTCCTaGCTGACTTGTGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYFLCVS*LTCGQK
Trigger: CTTCTGCCCACAAGTCAGGCAGGAGACGCACAGGAA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAGTGTTGCACGCTTTTTaGTGGTTCCTTCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKVLHAF*WFLQEP
Trigger: TGGTTCCTGAAGGAACCAGCAAAAAGCGTGCAACAC...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGGGATGCTCTTCTTGCTaGTGGTTCAAAATTCACAAG +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKGCSSC*WFKIHK
Trigger: CTTGTGAATTTTGAACCAGCAGCAAGAAGAGCATCC...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGTCACAGATATTGGATaGTCTTCTTGCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNVTDIG*SSCCWF
Trigger: GAACCAGCAGCAAGAAGAGCATCCAATATCTGTGAC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGCACACCAATTACAATaGATACTACCAGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCAHQLQ*ILPGQT
Trigger: AGTCTGACCTGGTAGTATGCATTGTAATTGGTGTGC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTCACCACAGAGGCTGTaGTGTAGGGATCTAGTTAAA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSPQRL*CRDLVK
Trigger: TTTAACTAGATCCCTACAGCACAGCCTCTGTGGTGA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACCATCATCCATGACATaGCGCAGAGCAAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLPSSMT*RRASKE
Trigger: CTCCTTGCTTGCTCTGCGGCATGTCATGGATGATGG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCCTGTGTCACAGGCGCTaGACAGAGACTGATCAACAT +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGLCHRR*TETDQH
Trigger: ATGTTGATCAGTCTCTGTCCAGCGCCTGTGACACAG...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACCCACTTTTTGTGGGTaGCTGAGAAGTATTGATTTT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIPTFCG*LRSIDF
Trigger: AAAATCAATACTTCTCAGCCACCCACAAAAAGTGGG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCTTTATGAGTGTGTTTaGTCTTTAGAGCACTGTATC +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHLYECV*SLEHCI
Trigger: GATACAGTGCTCTAAAGACCAAACACACTCATAAAG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTTGCACGCTTTTTGCTaGTTCCTTCAGGAACCAAAT +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCLHAFC*FLQEPN
Trigger: ATTTGGTTCCTGAAGGAACCAGCAAAAAGCGTGCAA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAAAATGCAACCTGGTTTaGCAAGCTATTCCTAGATCG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGKCNLV*QAIPRS
Trigger: CGATCTAGGAATAGCTTGCCAAACCAGGTTGCATTT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGGGAGAAGAAGAATCTaGTTGAACACTCTTAAGCAG +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSGRRRI*LNTLKQ
Trigger: CTGCTTAAGAGTGTTCAACCAGATTCTTCTTCTCCC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGATTATGACCATGTCTaGGAGAAGAAGAATCTGGTT +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIDYDHV*EKKNLV
Trigger: AACCAGATTCTTCTTCTCCCAGACATGGTCATAATC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCAATGGAGAAAAGTACTaGAATATGCTGGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCNGEKY*NMLAIP
Trigger: TGGGATGGCCAGCATATTCCAGTACTTTTCTCCATT...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTGTATTCAGTTTCTTTaGACTAGCAATTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSCIQFL*TSNCLC
Trigger: GCAGAGACAATTGCTAGTCCAAAGAAACTGAATACA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTGTATTCAGTTTCTTTaGACTAGCAATTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHCIQFL*TSNCLC
Trigger: GCAGAGACAATTGCTAGTCCAAAGAAACTGAATACA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGTCTTCATCAATGTTTaGATTAAAGGTCGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGVFINV*IKGRVH
Trigger: GTGGACCCGACCTTTAATCCAAACATTGATGAAGAC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTATGACTCTAAATTACTaGACATATGATGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSMTLNY*TYDGMQ
Trigger: CTGCATCCCATCATATGTCCAGTAATTTAGAGTCAT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATGACTCTAAATTACTaGACATATGATGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHMTLNY*TYDGMQ
Trigger: CTGCATCCCATCATATGTCCAGTAATTTAGAGTCAT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTGCTGTGGGGATTGTTaGCAGTTGTTGCATTGTTAC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNCCGDC*QLLHCY
Trigger: GTAACAATGCAACAACTGCCAACAATCCCCACAGCA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACCTGAGGGTTCCATTTaGTTCACCATCGACAGTCGG +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLPEGSI*FTIDSR
Trigger: CCGACTGTCGATGGTGAACCAAATGGAACCCTCAGG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGTGATGTTTGCAGGCTaGGATGCTTTGGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLVMFAG*DALAGA
Trigger: AGCTCCAGCCAAAGCATCCCAGCCTGCAAACATCAC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTGGAGTGTGAATTGTTaGCAGGACTTAAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNWSVNC*QDLRCC
Trigger: GCAACACCTTAAGTCCTGCCAACAATTCACACTCCA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTCACTTCTGCCTTTCTaGAGTGTGAATTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSLLPF*SVNCWQ
Trigger: CTGCCAACAATTCACACTCCAGAAAGGCAGAAGTGA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACTTCCAGAATTTGACTaGGATCCACAATTTGGACTC +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGLPEFD*DPQFGL
Trigger: GAGTCCAAATTGTGGATCCCAGTCAAATTCTGGAAG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACGGGAAAATCATTCAGTaGAGTGTCTGGAAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHGKIIQ*SVWKSH
Trigger: GTGGCTTTTCCAGACACTTCACTGAATGATTTTCCC...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAAAAGTCACCAGCAAGCTaGAATTCCCCAGATAAACCA +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKEKSPAS*NSPDKP
Trigger: TGGTTTATCTGGGGAATTTCAGCTTGCTGGTGACTT...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGTGGCTGAGAAGTATTaGTTTTCAAGTCACCAGCAA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNVAEKY*FSSHQQ
Trigger: TTGCTGGTGACTTGAAAATCAATACTTCTCAGCCAC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCTTTTTGTGGGTGGCTaGGAAGTATTGATTTTCAAG +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSLFVGG*EVLIFK
Trigger: CTTGAAAATCAATACTTCTCAGCCACCCACAAAAAG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAGGATGCTCTCTATGTaGGTTGAGCTGGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLRMLSM*VELVCS
Trigger: TGAGCAGACCAGCTCAACTCACATAGAGAGCATCCT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTCTACTCAAGTCACTCTaGTCACTAGAGTCTTCGTCA +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLLLKSL*SLESSS
Trigger: TGACGAAGACTCTAGTGATCAGAGTGACTTGAGTAG...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATACAAATGTATTCACCTaGGGCAGGAGACCAATGAAA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNTNVFT*GRRPMK
Trigger: TTTCATTGGTCTCCTGCCTCAGGTGAATACATTTGT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATGCTGCTCAGTTCATTaGGAACAATCAATGGATAGA +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGCCSVH*EQSMDR
Trigger: TCTATCCATTGATTGTTCTCAATGAACTGAGCAGCA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAATGACTGTAACATACTaGTATGTAGGGCTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIMTVTY*YVGLLK
Trigger: TTTTAGCAGCCCTACATATCAGTATGTTACAGTCAT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAAGCAGAACCCCATGTaGTCTGCCATGGGGCAATAT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLKQNPM*SAMGQY
Trigger: ATATTGCCCCATGGCAGATCACATGGGGTTCTGCTT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGGCACTGCAAAAGGCTaGGCAAAAGCATGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLGTAKG*AKAWKA
Trigger: TGCTTTCCATGCTTTTGCTCAGCCTTTTGCAGTGCC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTTAAATGAAAGCATGTaGGGAATATGGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCLNESM*GIWPGS
Trigger: TGAACCTGGCCATATTCCTCACATGCTTTCATTTAA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATAAATTACTGGACATATaGTGGGATGCAGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNKLLDI*WDAVPK
Trigger: TTTGGGGACTGCATCCCATCATATGTCCAGTAATTT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCCCATTCATCTCGAATTaGAGAAATACGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCPFISN*RNTEIS
Trigger: GGAGATTTCCGTATTTCTTCAATTCGAGATGAATGG...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAGGTTGATCACAAGATaGGTTTATCATGTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCRLITR*VYHVSQ
Trigger: CTGAGAAACATGATAAACTCATCTTGTGATCAACCT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCGGGATTGGATGGATaGTGGCAAGTTTCGAAGCGA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLSGLDG*WQVSKR
Trigger: TCGCTTCGAAACTTGCCATCATCCATCCAATCCCGA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAGGCCCAGTGCTGGATaGATGACTCACAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLRPSAG*MTHNSN
Trigger: ATTGCTGTTGTGAGTCATTCATCCAGCACTGGGCCT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAACACAGGACAATAAACTaGTACTATAATCATGGTAGA +
Preference number: 4 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEHRTIN*YYNHGR
Trigger: TCTACCATGATTATAGTAGCAGTTTATTGTCCTGTG...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAAGAGCTTCCGATCAGCTaGCAAATCTTGTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKEELPIS*QILFFT
Trigger: AGTGAAGAACAAGATTTGGCAGCTGATCGGAAGCTC...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTGTGTTCAGAGTCTGTaGCCCTTTCTTTATGAGTGT +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNCVQSL*PFLYEC
Trigger: ACACTCATAAAGAAAGGGGCACAGACTCTGAACACA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCATTGGATGCTCTTCTTaGTGCTGGTTCAAAATTCAC +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSIGCSS*CWFKIH
Trigger: GTGAATTTTGAACCAGCAGCAAGAAGAGCATCCAAT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGGATAAAACTGTAAAGTaGTGCAAGCAGGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKDKTVK*CKQACS
Trigger: ACTACAAGCCTGCTTGCAGCACTTTACAGTTTTATC...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGATAAAACTGTAAAGTaGTGCAAGCAGGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSDKTVK*CKQACS
Trigger: ACTACAAGCCTGCTTGCAGCACTTTACAGTTTTATC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATAAAAGTACTGGAATATaGTGGCCATCCCAAGAATCC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNKSTGI*WPSQES
Trigger: GGATTCTTGGGATGGCCAGCATATTCCAGTACTTTT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCACACCAATTACAATaGATACTACCAGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNAHQLQ*ILPGQT
Trigger: AGTCTGACCTGGTAGTATGCATTGTAATTGGTGTGC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCCACATCATAGTGGCTaGATTTCGAACTTCATACTG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNPHHSG*ISNFIL
Trigger: CAGTATGAAGTTCGAAATGCAGCCACTATGATGTGG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACAGACGAAGTCCTTCCTaGATTGTCTCATTAGCTAGC +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHRRSPS*IVSLAS
Trigger: GCTAGCTAATGAGACAATGCAGGAAGGACTTCGTCT...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAACCACATCGACATAATTaGGATCAGCACACAGACGAA +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKPHRHN*DQHTDE
Trigger: TTCGTCTGTGTGCTGATCGCAATTATGTCGATGTGG...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACACATCCACAGGCTTTaGTCTTCGGGAAGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLHIHRL*SSGRAV
Trigger: TACTGCTCTTCCCGAAGAGCAAAGCCTGTGGATGTG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCAGAATCTTCAATATTaGCACCACTGTTACATCCAG +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSQNLQY*HHCYIQ
Trigger: CTGGATGTAACAGTGGTGGCAATATTGAAGATTCTG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCTGGACCAGAAGCACTaGCTTGTCGATGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYLDQKH*LVDVGS
Trigger: AGATCCCACATCGACAAGGCAGTGCTTCTGGTCCAG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAAGGGCAAAGGAGAGGTaGTTAACCAAGCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKRAKER*LTKLIL
Trigger: TAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCT...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATATGGCTGCTCCTAAATaGTCAGAGGAGATGTACAAT +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNMAAPK*SEEMYN
Trigger: ATTGTACATCTCCTCTGAGCATTTAGGAGCAGCCAT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCAAAGACTAGAACTTTaGCCCAGACTTAAACTGATA +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCQRLEL*PRLKLI
Trigger: TATCAGTTTAAGTCTGGGCCAAAGTTCTAGTCTTTG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCATCTTTACGCACTTTaGAATCCACAGAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNHLYAL*NPQKQL
Trigger: CAGCTGTTTCTGTGGATTCCAAAGTGCGTAAAGATG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCAGAAGCTGTCCGATaGATTACGCTAGAAGATTTA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNAEAVR*ITLEDL
Trigger: TAAATCTTCTAGCGTAATCCATCGGACAGCTTCTGC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAAGTGACTGTCTCTAACTaGGAAGCCCGTCCTAATAAA +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKEVTVSN*EARPNK
Trigger: TTTATTAGGACGGGCTTCCCAGTTAGAGACAGTCAC...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAACTGTGTCACAGATATTaGATGCTCTTCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKELCHRY*MLFLLL
Trigger: CAGCAGCAAGAAGAGCATCCAATATCTGTGACACAG...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGGCAGCTTCTTCTGTTaGGCCGTAAGTAGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYGSFFC*AVSSCQ
Trigger: TTGGCAGCTACTTACGGCCCAACAGAAGAAGCTGCC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACCCATGTGATCTGCCATaGGGCAATATAGGTATACAC +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHPCDLP*GNIGIH
Trigger: GTGTATACCTATATTGCCCCATGGCAGATCACATGG...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGGATTTCTATCAAGCTaGGAAGCCAATCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCGFLSS*EANLVF
Trigger: AAATACCAGATTGGCTTCCCAGCTTGATAGAAATCC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTTTCCAATGCTTCCCTaGGTCACGTTGCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYFPMLP*VTLLWG
Trigger: TCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGCACAAACCCAGTGGTaGACATCCGGAGGGATGAAT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYAQTQW*TSGGMN
Trigger: ATTCATCCCTCCGGATGTCCACCACTGGGTTTGTGC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATATTTATCATCAATCTaGACCAGAAGCACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGYLSSI*TRSTAL
Trigger: CAAGGCAGTGCTTCTGGTCCAGATTGATGATAAATA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGAAAAATAAGACGGCCTaGGTGCATATCAATCAACCA +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKKNKTA*VHINQP
Trigger: TGGTTGATTGATATGCACCCAGGCCGTCTTATTTTT...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGGTTCGCTGATCCGTaGACTCATTTGCAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLWFADP*THLQSY
Trigger: ATAGGACTGCAAATGAGTTCACGGATCAGCGAACCA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCTAGAGTCTTCGTCATaGCAAAATATAGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNLESSS*QNIALC
Trigger: ACACAGTGCTATATTTTGTCATGACGAAGACTCTAG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAAGTGCCCCTTTCTTTATaGGTGTGTTTGGTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKEVPLSL*VCLVFR
Trigger: TCTAAAGACCAAACACACTCATAAAGAAAGGGGCAC...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATCAAACCAGCAACAGTaGTCATTAAAGCACCTAATT +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGSNQQQ*SLKHLI
Trigger: AATTAGGTGCTTTAATGATCACTGTTGCTGGTTTGA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATAAGCAGAACCCCATGTaGTCTGCCATGGGGCAATAT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYKQNPM*SAMGQY
Trigger: ATATTGCCCCATGGCAGATCACATGGGGTTCTGCTT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGGCACTGCAAAAGGCTaGGCAAAAGCATGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYGTAKG*AKAWKA
Trigger: TGCTTTCCATGCTTTTGCTCAGCCTTTTGCAGTGCC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATAGCCAATCTGGTATTTaGATGATCCACTCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSQSGI*MIHSFC
Trigger: ACAAAACGAGTGGATCATTCAAATACCAGATTGGCT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATAGTACTCTATCCAGTTaGGGTAAATCACACAGAAAC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSTLSS*GKSHRN
Trigger: GTTTCTGTGTGATTTACCTCAACTGGATAGAGTACT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCCATTCATCTCGAATTaGAGAAATACGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNPFISN*RNTEIS
Trigger: GGAGATTTCCGTATTTCTTCAATTCGAGATGAATGG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAAGGTTGATCACAAGATaGGTTTATCATGTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGRLITR*VYHVSQ
Trigger: CTGAGAAACATGATAAACTCATCTTGTGATCAACCT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAAGCCTGTGCCAGGTTaGCACTATGAAGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLKPVPG*HYEVPD
Trigger: ATCAGGAACTTCATAGTGTCAACCTGGCACAGGCTT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCATCCCTTCCAGAATTTaGCTGGGATCCACAATTTGG +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGIPSRI*LGSTIW
Trigger: CCAAATTGTGGATCCCAGTCAAATTCTGGAAGGGAT...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGGTACATGTAGCTATTaGGTACTTGAAATATGGCTA +
Preference number: 4 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGGTCSY*VLEIWL
Trigger: TAGCCATATTTCAAGTACTCAATAGCTACATGTACC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCCAGTGCTGGATGAATaGCTCACAACAGCAATCCAC +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYPVLDE*LTTAIH
Trigger: GTGGATTGCTGTTGTGAGTCATTCATCCAGCACTGG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCAGGAGGAAAGATGCTTaGAAGCTAGCTATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCRRKDA*KLAIRK
Trigger: TTTTCTTATAGCTAGCTTTCAAGCATCTTTCCTCCT...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCATCTCCACTAATCTCTaGATTAAAGGAAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSISTNL*IKGKAS
Trigger: AGAGGCTTTTCCTTTAATTCAGAGATTAGTGGAGAT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACCTAGCTTGGCTCCACTaGATCATAAATTGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHLAWLH*IINCQV
Trigger: TACCTGACAATTTATGATTCAGTGGAGCCAAGCTAG...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCACAGGACAATAAACTaGTACTATAATCATGGTAGA +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCHRTIN*YYNHGR
Trigger: TCTACCATGATTATAGTAGCAGTTTATTGTCCTGTG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAATCTCCTTTAATAGTTaGTGCTGTTCCAAGACGCGA +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKISFNS*CCSKTR
Trigger: TCGCGTCTTGGAACAGCAGCAACTATTAAAGGAGAT...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAATGTGTTCAGAGTCTGTaGCCCTTTCTTTATGAGTGT +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKCVQSL*PFLYEC
Trigger: ACACTCATAAAGAAAGGGGCACAGACTCTGAACACA...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATAGAAGTCCGTCGTGTTaGACGCTTTTTGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYRSPSC*TLFAGS
Trigger: GGAACCAGCAAAAAGCGTGCAACACGACGGACTTCT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCAAACATGCTACTGTaGCACTGTCCAGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLSNMLL*HCPGST
Trigger: TGTTGAGCCTGGACAGTGGCACAGTAGCATGTTTGA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAAAAAAGTACTGGAATATaGTGGCCATCCCAAGAATCC +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKEKSTGI*WPSQES
Trigger: GGATTCTTGGGATGGCCAGCATATTCCAGTACTTTT...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACCTTTCCTAAGCCTGTaGCAGGTTGACACTATGAAG +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLPFLSL*QVDTMK
Trigger: CTTCATAGTGTCAACCTGGCACAGGCTTAGGAAAGG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCAGAATCTTCAATATTaGCACCACTGTTACATCCAG +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNQNLQY*HHCYIQ
Trigger: CTGGATGTAACAGTGGTGGCAATATTGAAGATTCTG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTTGCATTGTTACCAGTaGAGGAAGTCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYLHCYQ*RKSHLQ
Trigger: CTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCTTACCTCCACTGACTaGATCTTGCTCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYLTSTD*ILLFPF
Trigger: GAAGGGGAAGAGCAAGATGCAGTCAGTGGAGGTAAG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439984.7
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACGGCATAAGAATTTCTaGAACTGCAACCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLRHKNF*NCNQLG
Trigger: CCCCAGTTGGTTGCAGTTCCAGAAATTCTTATGCCG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGCTATTCTTCTCCTCTaGGCCTGCACAGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYAILLL*ACTALF
Trigger: AAAGAGTGCTGTGCAGGCCCAGAGGAGAAGAATAGC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTCATGGGGATTTTTATTaGCTTCTTCAGATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLHGDFY*LLQMQR
Trigger: CCTCTGCATCTGAAGAAGCCAATAAAAATCCCCATG...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAGCAGAAGCTGTCCGATaGATTACGCTAGAAGATTTA +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKAEAVR*ITLEDL
Trigger: TAAATCTTCTAGCGTAATCCATCGGACAGCTTCTGC...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAAAATATAGCACTGTGTaGCTTGGTACCAGAAACACC +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKKYSTV*LGTRNT
Trigger: GGTGTTTCTGGTACCAAGCCACACAGTGCTATATTT...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGCTTTATGAGTGTGTTTaGTCTTTAGAGCACTGTATC +
Preference number: 4 (lower is better)
Translates to: HSTITFLSKEGVAEELNKLYECV*SLEHCI
Trigger: GATACAGTGCTCTAAAGACCAAACACACTCATAAAG...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAATTGCACGCTTTTTGCTaGTTCCTTCAGGAACCAAAT +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKELHAFC*FLQEPN
Trigger: ATTTGGTTCCTGAAGGAACCAGCAAAAAGCGTGCAA...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAATTCAATCGAATCTGTaGGAGAGAGAGCACATCATG +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKIQSNL*EREHIM
Trigger: CATGATGTGCTCTCTCTCCCACAGATTCGATTGAAT...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAGTCTTCATCAATGTTTaGATTAAAGGTCGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKVFINV*IKGRVH
Trigger: GTGGACCCGACCTTTAATCCAAACATTGATGAAGAC...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAACTTCCAGAATTTGACTaGGATCCACAATTTGGACTC +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKELPEFD*DPQFGL
Trigger: GAGTCCAAATTGTGGATCCCAGTCAAATTCTGGAAG...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGTTGATTCCACAAAATaGCAGATAATGAAGTTCAAC +
Preference number: 4 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCVDSTK*QIMKFN
Trigger: GTTGAACTTCATTATCTGCCATTTTGTGGAATCAAC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAACTAGAGTCTTCGTCATaGCAAAATATAGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKELESSS*QNIALC
Trigger: ACACAGTGCTATATTTTGTCATGACGAAGACTCTAG...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCACAAATGTATTCACCTaGGGCAGGAGACCAATGAAA +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGTNVFT*GRRPMK
Trigger: TTTCATTGGTCTCCTGCCTCAGGTGAATACATTTGT...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTCAGATTGTTGTCATCTaGTCCTGGATTTCTATCAAG +
Preference number: 4 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLQIVVI*SWISIK
Trigger: CTTGATAGAAATCCAGGATCAGATGACAACAATCTG...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGGTGTACTAATGCATTaGGATAGTCAGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLGVLMH*DSQRQG
Trigger: TCCTTGCCTCTGACTATCTCAATGCATTAGTACACC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR TCA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCTTCCTCAACACCAATaGAACAATATCCATGTAAGA +
Preference number: 4 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNLPQHQ*NNIHVR
Trigger: TCTTACATGGATATTGTTTCATTGGTGTTGAGGAAG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCATCTCTGGTTTATACTaGATGCTGGTAAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGISGLY*MLVKAM
Trigger: CATGGCCTTTACCAGCATTCAGTATAAACCAGAGAT...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTTAGGAGACTCCTCATaGTCTGACAGGATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYLGDSS*SDRMLS
Trigger: AGAGAGCATCCTGTCAGAGCATGAGGAGTCTCCTAA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATATTGGCTTCTTCAGATaGAGAGGTGCTGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYIGFFR*RGAETS
Trigger: AGAGGTCTCAGCACCTCTGCATCTGAAGAAGCCAAT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCACCACAGAGGCTGTaGTGTAGGGATCTAGTTAAA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLSPQRL*CRDLVK
Trigger: TTTAACTAGATCCCTACAGCACAGCCTCTGTGGTGA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACCACATCGACATAATTaGGATCAGCACACAGACGAA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLPHRHN*DQHTDE
Trigger: TTCGTCTGTGTGCTGATCGCAATTATGTCGATGTGG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCCTTTCCTAAGCCTGTaGCAGGTTGACACTATGAAG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYPFLSL*QVDTMK
Trigger: CTTCATAGTGTCAACCTGGCACAGGCTTAGGAAAGG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACTCATGCAGAGCTCATTaGCAGACTTGTATAGGTTTA +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHSCRAH*QTCIGL
Trigger: TAAACCTATACAAGTCTGGCAATGAGCTCTGCATGA...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCCACCAAGGATTCTTTaGATCCAGAAAGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYPPRIL*IQKEAW
Trigger: CCAAGCCTCTTTCTGGATCCAAAGAATCCTTGGTGG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAATCGACAGTCGGGATTaGATGGATGATGGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLIDSRD*MDDGKF
Trigger: AAACTTGCCATCATCCATCCAATCCCGACTGTCGAT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAATATTTATCATCAATCTaGACCAGAAGCACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKEYLSSI*TRSTAL
Trigger: CAAGGCAGTGCTTCTGGTCCAGATTGATGATAAATA...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACCTTTATAATAAACACTaGCTCACACTTCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHLYNKH*LTLQPQ
Trigger: TTGGGGCTGAAGTGTGAGCCAGTGTTTATTATAAAG...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCGATCCGCTGACTATTaGCTCTGGGAAATGTCAATG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYRSADY*LWEMSM
Trigger: CATTGACATTTCCCAGAGCCAATAGTCAGCGGATCG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGTCTACTGTAGGCAATaGTACGATTATGACCATGTC +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLVYCRQ*YDYDHV
Trigger: GACATGGTCATAATCGTATCATTGCCTACAGTAGAC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTATACAACACATACTTaGGGGCAGGCTGCAATACTG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYYTTHT*GQAAIL
Trigger: CAGTATTGCAGCCTGCCCTCAAGTATGTGTTGTATA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAATCAAACCAGCAACAGTaGTCATTAAAGCACCTAATT +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKSNQQQ*SLKHLI
Trigger: AATTAGGTGCTTTAATGATCACTGTTGCTGGTTTGA...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACACAGGTCGGACATATaGAGTGATGAATATTGCACT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLHRSDI*SDEYCT
Trigger: AGTGCAATATTCATCACTTCATATGTCCGACCTGTG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCAGCACTGTTATCAGTaGTGCTATAACCCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYQHCYQ*CYNPPE
Trigger: TTCTGGAGGGTTATAGCATCACTGATAACAGTGCTG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCGTTATACATAATTCTTaGCAGATGACTCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGVIHNS*QMTLVR
Trigger: CCTCACCAGAGTCATCTGTCAAGAATTATGTATAAC...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGAGCTTCCGATCAGCTaGCAAATCTTGTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYELPIS*QILFFT
Trigger: AGTGAAGAACAAGATTTGGCAGCTGATCGGAAGCTC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCATTGGATGCTCTTCTTaGTGCTGGTTCAAAATTCAC +
Preference number: 4 (lower is better)
Translates to: TRKYICPYLWFILNAGKGIGCSS*CWFKIH
Trigger: GTGAATTTTGAACCAGCAGCAAGAAGAGCATCCAAT...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACAGATCAATGTCCTGTTaGTCCAACAAATCTGTATCA +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHRSMSC*SNKSVS
Trigger: TGATACAGATTTGTTGGAGCAACAGGACATTGATCT...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTTGCAGTCAGGTTTCTaGTACCATAATCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYLQSGF*YHNPRA
Trigger: GGCTCTTGGATTATGGTAGCAGAAACCTGACTGCAA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAAAAGTACTGGAATATaGTGGCCATCCCAAGAATCC +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLKSTGI*WPSQES
Trigger: GGATTCTTGGGATGGCCAGCATATTCCAGTACTTTT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACCACATCATAGTGGCTaGATTTCGAACTTCATACTG +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLPHHSG*ISNFIL
Trigger: CAGTATGAAGTTCGAAATGCAGCCACTATGATGTGG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTCTCAGGGCTTGCTTTaGATTTTGGATGCTACCTCT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYSQGLL*ILDATS
Trigger: AGAGGTAGCATCCAAAATGCAAAGCAAGCCCTGAGA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACCAAAGACTAGAACTTTaGCCCAGACTTAAACTGATA +
Preference number: 4 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHQRLEL*PRLKLI
Trigger: TATCAGTTTAAGTCTGGGCCAAAGTTCTAGTCTTTG...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCCATGTGATCTGCCATaGGGCAATATAGGTATACAC +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYPCDLP*GNIGIH
Trigger: GTGTATACCTATATTGCCCCATGGCAGATCACATGG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTGGAGTGTGAATTGTTaGCAGGACTTAAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYWSVNC*QDLRCC
Trigger: GCAACACCTTAAGTCCTGCCAACAATTCACACTCCA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTGACAGTAGGTACCTaGATTTCTATCAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLLTVGT*ISIKLG
Trigger: TCCCAGCTTGATAGAAATCCAGGTACCTACTGTCAA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGCTGCTCAGTTCATTaGGAACAATCAATGGATAGA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLCCSVH*EQSMDR
Trigger: TCTATCCATTGATTGTTCTCAATGAACTGAGCAGCA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATAAATTACTGGACATATaGTGGGATGCAGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYKLLDI*WDAVPK
Trigger: TTTGGGGACTGCATCCCATCATATGTCCAGTAATTT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACCATTCATCTCGAATTaGAGAAATACGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLPFISN*RNTEIS
Trigger: GGAGATTTCCGTATTTCTTCAATTCGAGATGAATGG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATATCTCCTTTAATAGTTaGTGCTGTTCCAAGACGCGA +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYISFNS*CCSKTR
Trigger: TCGCGTCTTGGAACAGCAGCAACTATTAAAGGAGAT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGGATGCTCTTCTTGCTaGTGGTTCAAAATTCACAAG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYGCSSC*WFKIHK
Trigger: CTTGTGAATTTTGAACCAGCAGCAAGAAGAGCATCC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGATAAAACTGTAAAGTaGTGCAAGCAGGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLDKTVK*CKQACS
Trigger: ACTACAAGCCTGCTTGCAGCACTTTACAGTTTTATC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGCACACCAATTACAATaGATACTACCAGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYAHQLQ*ILPGQT
Trigger: AGTCTGACCTGGTAGTATGCATTGTAATTGGTGTGC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGATCAAAGTGATACCTaGAGGCATCTTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYDQSDT*RHLLLV
Trigger: AACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGATTATGACCATGTCTaGGAGAAGAAGAATCTGGTT +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLDYDHV*EKKNLV
Trigger: AACCAGATTCTTCTTCTCCCAGACATGGTCATAATC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCAAGCTAGCCATCGCTaGCTAAATGCAGCATTAAAT +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYQASHR*LNAALN
Trigger: ATTTAATGCTGCATTTAGCCAGCGATGGCTAGCTTG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATATTTATCATCAATCTaGACCAGAAGCACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLYLSSI*TRSTAL
Trigger: CAAGGCAGTGCTTCTGGTCCAGATTGATGATAAATA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACTTTATAATAAACACTaGCTCACACTTCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLLYNKH*LTLQPQ
Trigger: TTGGGGCTGAAGTGTGAGCCAGTGTTTATTATAAAG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CCA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAAAAGAAGGCAGAACACTaGTTAAGTTTGTTCACTAAT +
Preference number: 4 (lower is better)
Translates to: TELSYNLVVTISSSSTKEKKAEH*LSLFTN
Trigger: ATTAGTGAACAAACTTAACCAGTGTTCTGCCTTCTT...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAAAAGAGAAAATTAACTaGGTCTCTGTCCAAAGTAAC +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKKEKIN*VSVQSN
Trigger: GTTACTTTGGACAGAGACCCAGTTAATTTTCTCTTT...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAATATGTCCTTATCTCTaGTTTATACTGAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKICPYL*FILNAG
Trigger: ACCAGCATTCAGTATAAACCAGAGATAAGGACATAT...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATAAAAGAAGCCACACATaGAGTTTCTCAAACCACATC +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYKRSHT*SFSNHI
Trigger: GATGTGGTTTGAGAAACTTCATGTGTGGCTTCTTTT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTTAAATGAAAGCATGTaGGGAATATGGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYLNESM*GIWPGS
Trigger: TGAACCTGGCCATATTCCTCACATGCTTTCATTTAA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAGGTTGATCACAAGATaGGTTTATCATGTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLRLITR*VYHVSQ
Trigger: CTGAGAAACATGATAAACTCATCTTGTGATCAACCT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAGATCAATGTCCTGTTaGTCCAACAAATCTGTATCA +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLRSMSC*SNKSVS
Trigger: TGATACAGATTTGTTGGAGCAACAGGACATTGATCT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CCA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGTATTCAGTTTCTTTaGACTAGCAATTGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLCIQFL*TSNCLC
Trigger: GCAGAGACAATTGCTAGTCCAAAGAAACTGAATACA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR TCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATATGACTGTAACATACTaGTATGTAGGGCTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYMTVTY*YVGLLK
Trigger: TTTTAGCAGCCCTACATATCAGTATGTTACAGTCAT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR GCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGAACTTTATCCTTCATaGAAAATGTTTTCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYELYPS*KMFSRQ
Trigger: CTGCCGAGAAAACATTTTGCATGAAGGATAAAGTTC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CCA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGACAACTTTAGACACTaGGTGAATCTTCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: FLSFSNALELRGKKKCLYDNFRH*VNLQLK
Trigger: TTTAAGCTGAAGATTCACCCAGTGTCTAAAGTTGTC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS TCA 90 bp CGAGCGGCGGGGCGGAGGACGGCGGAGAGGAGGAGACCGGCCTTCTaGGAGCCGCCGCCATCTTGTCTCCTAACACCCGGAGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: RAAGRRTAERRRPAF*EPPPSCLLTPGAAA
Trigger: GGCCGCGGCTCCGGGTGTTAGGAGACAAGATGGCGGCGGCTCTCAGAAGGCCGGTCTCCTCCTCTCCGCCGTCCTCCGCCCCGCCGCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS TCA 90 bp CCGGAGCCTGCAGCTGCCCCGTCTATCCACCTCCGGAGCTCCGGGTaGGCGAGCCGGCGCTTCGGCGGTCGCTGGTGCTGCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PEPAAAPSIHLRSSG*ASRRFGGRWCCCRR
Trigger: CCTCCTGCAGCAGCACCAGCGACCGCCGAAGCGCCGGCTCGCTCACCCGGAGCTCCGGAGGTGGATAGACGGGGCAGCTGCAGGCTCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000554292.1
ENST00000554879.5
CDS GCA 90 bp CCACGAGAGTGTGATGTTTGCAGGCTGGGATGCTTTGGCTGGAGCTaGTGGAGGAAGGCAGGCCGTGCTGCACACAGGCCAGGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: PRECDVCRLGCFGWS*WRKAGRAAHRPGRS
Trigger: AGAGCGGCCTGGCCTGTGTGCAGCACGGCCTGCCTTCCTCCAGCAGCTCCAGCCAAAGCATCCCAGCCTGCAAACATCACACTCTCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 90 bp CTGCTGGAGGAAGGCAGGCCGTGCTGCACACAGGCCAGGCCGCTCTaGCCTGAGGGTTCCATTTGGTTCACCATCGACAGTCGGGATTGG +
Preference number: 5 (lower is better)
Translates to: LLEEGRPCCTQARPL*PEGSIWFTIDSRDW
Trigger: CCAATCCCGACTGTCGATGGTGAACCAAATGGAACCCTCAGGTCAGAGCGGCCTGGCCTGTGTGCAGCACGGCCTGCCTTCCTCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 90 bp GCGCCGTACTGCCTGGCGCCTAAATGTGCTGCGTTCACGGCGAAATaGCACTGCCTCCTCGCTGGCTTGTGCTGCTCCACTGACTGCATC +
Preference number: 5 (lower is better)
Translates to: APYCLAPKCAAFTAK*HCLLAGLCCSTDCI
Trigger: GATGCAGTCAGTGGAGCAGCACAAGCCAGCGAGGAGGCAGTGTCATTTCGCCGTGAACGCAGCACATTTAGGCGCCAGGCAGTACGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS TCA 90 bp GGAGGAAGGCAGGCCGTGCTGCACACAGGCCAGGCCGCTCTGACCTaGGGGTTCCATTTGGTTCACCATCGACAGTCGGGATTGGATGGA +
Preference number: 5 (lower is better)
Translates to: GGRQAVLHTGQAALT*GFHLVHHRQSGLDG
Trigger: TCCATCCAATCCCGACTGTCGATGGTGAACCAAATGGAACCCTCAGGTCAGAGCGGCCTGGCCTGTGTGCAGCACGGCCTGCCTTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 90 bp GATCCGATGAGCAATGTAGGAGGGGTAGGGTTACTCCCTGCATTGTaGCGGCGCCGTACTGCCTGGCGCCTAAATGTGCTGCGTTCACGG +
Preference number: 5 (lower is better)
Translates to: DPMSNVGGVGLLPAL*RRRTAWRLNVLRSR
Trigger: CCGTGAACGCAGCACATTTAGGCGCCAGGCAGTACGGCGCCGGCACAATGCAGGGAGTAACCCTACCCCTCCTACATTGCTCATCGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS GCA 90 bp GAAGCACTGCCTTGTCGATGTGGGATCTGGTACCTGGATCTCTGCTaGAAGGCACCCATCGGTGAATCACATGGCCTTCCATGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: EALPCRCGIWYLDLC*KAPIGESHGLPCPP
Trigger: AGGAGGGCATGGAAGGCCATGTGATTCACCGATGGGTGCCTTGCAGCAGAGATCCAGGTACCAGATCCCACATCGACAAGGCAGTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 90 bp TGTTGGCAGGACTTAAGGTGTTGCCTGGCTGTGCATCAGTGGCACTaGTCTGACCTCCCTCTGTCGCAAGAAAGCCCACGAGAGTGTGAT +
Preference number: 5 (lower is better)
Translates to: CWQDLRCCLAVHQWH*SDLPLSQESPRECD
Trigger: ATCACACTCTCGTGGGCTTTCTTGCGACAGAGGGAGGTCAGAGCAGTGCCACTGATGCACAGCCAGGCAACACCTTAAGTCCTGCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 90 bp GTGAATTGTTGGCAGGACTTAAGGTGTTGCCTGGCTGTGCATCAGTaGCACTGCTCTGACCTCCCTCTGTCGCAAGAAAGCCCACGAGAG +
Preference number: 5 (lower is better)
Translates to: VNCWQDLRCCLAVHQ*HCSDLPLSQESPRE
Trigger: CTCTCGTGGGCTTTCTTGCGACAGAGGGAGGTCAGAGCAGTGCCACTGATGCACAGCCAGGCAACACCTTAAGTCCTGCCAACAATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 90 bp AGTACTGTTAGTGTCCCGGTCCGTTCCACTGCAGTAGCTTTCTGTTaGCCCACTACTCCGTGTGCTCAGGCTCCTCAAGCTGTCCATGCT +
Preference number: 5 (lower is better)
Translates to: STVSVPVRSTAVAFC*PTTPCAQAPQAVHA
Trigger: AGCATGGACAGCTTGAGGAGCCTGAGCACACGGAGTAGTGGGTCAACAGAAAGCTACTGCAGTGGAACGGACCGGGACACTAACAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CCA 90 bp AATCTGGACCAGAAGCACTGCCTTGTCGATGTGGGATCTGGTACCTaGATCTCTGCTGCAAGGCACCCATCGGTGAATCACATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: NLDQKHCLVDVGSGT*ISAARHPSVNHMAF
Trigger: GAAGGCCATGTGATTCACCGATGGGTGCCTTGCAGCAGAGATCCAGGTACCAGATCCCACATCGACAAGGCAGTGCTTCTGGTCCAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 90 bp TTCCTGATCCCTGCCCAGGATTTCCAATGCTTCCCTGGGTCACGTTaGTGTGGGGATTGTTGGCAGTTGTTGCATTGTTACCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: FLIPAQDFQCFPGSR*CGDCWQLLHCYQCR
Trigger: CCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAATCCTGGGCAGGGATCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 90 bp GGCGCTGGACAGAGACTGATCAACATGGTGGTGGTGGTTATGACTTaGCAGGTTCACTTTGTCACTGAAGTCCCTTGGCAAGTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: GAGQRLINMVVVVMT*QVHFVTEVPWQVLS
Trigger: GGACAGGACTTGCCAAGGGACTTCAGTGACAAAGTGAACCTGCCAAGTCATAACCACCACCACCATGTTGATCAGTCTCTGTCCAGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553272.6
ENST00000553428.2
ENST00000554879.5
CDS CCA 90 bp CAGGATTTCCAATGCTTCCCTGGGTCACGTTGCTGTGGGGATTGTTaGCAGTTGTTGCATTGTTACCAGTGCAGGAAGTCCCACCTCCAG +
Preference number: 5 (lower is better)
Translates to: QDFQCFPGSRCCGDC*QLLHCYQCRKSHLQ
Trigger: CTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 90 bp GATCCCTGCCCAGGATTTCCAATGCTTCCCTGGGTCACGTTGCTGTaGGGATTGTTGGCAGTTGTTGCATTGTTACCAGTGCAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: DPCPGFPMLPWVTLL*GLLAVVALLPVQEV
Trigger: GACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAATCCTGGGCAGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 90 bp CCCTCCACCAGGATCACTCGGTCCATTGCTGTCTTTTCTCCTGGTTaGACAGTTGCCTTGTTCAGCTTTGGTTCGCTGATCCGTGAACTC +
Preference number: 5 (lower is better)
Translates to: PSTRITRSIAVFSPG*TVALFSFGSLIREL
Trigger: GAGTTCACGGATCAGCGAACCAAAGCTGAACAAGGCAACTGTTCAACCAGGAGAAAAGACAGCAATGGACCGAGTGATCCTGGTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553508.5
ENST00000554879.5
CDS TCA 90 bp GACAGTCGGGATTGGATGGATGATGGCAAGTTTCGAAGCGATATCTaGCTAGTAGAAGAGCGCCGACAAGGCACAAACCCAGTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: DSRDWMDDGKFRSDI*LVEERRQGTNPVVD
Trigger: GTCCACCACTGGGTTTGTGCCTTGTCGGCGCTCTTCTACTAGTCAGATATCGCTTCGAAACTTGCCATCATCCATCCAATCCCGACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 90 bp CTGCTACCGCCTACAGCAGATGCATTGTCATGTGATGCTTCTAAGTaGACACTCCCATTTCTCACCAGCAAGGAGGCACTAGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: LLPPTADALSCDASK*TLPFLTSKEALALS
Trigger: GCTCAGTGCTAGTGCCTCCTTGCTGGTGAGAAATGGGAGTGTCCACTTAGAAGCATCACATGACAATGCATCTGCTGTAGGCGGTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS CCA 90 bp TGGAGTCCAGTTCCTGATCCCTGCCCAGGATTTCCAATGCTTCCCTaGGTCACGTTGCTGTGGGGATTGTTGGCAGTTGTTGCATTGTTA +
Preference number: 5 (lower is better)
Translates to: WSPVPDPCPGFPMLP*VTLLWGLLAVVALL
Trigger: TAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAATCCTGGGCAGGGATCAGGAACTGGACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAAGAGCCGCCGCCATCTaGTCTCCTAACACCCGGAGC +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGRAAAI*SPNTRS
Trigger: GCTCCGGGTGTTAGGAGACAAGATGGCGGCGGCTCT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTGAGACCTCTCTGGTaGTGCATCTCATCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFLRPLW*CISSEG
Trigger: CCCCTCTGATGAGATGCACAACCAGAGAGGTCTCAG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACAGCAAGGAGGGAGAGTaGGCAAGTACTGCACTCCGC +
Preference number: 5 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHSKEGE*ASTALR
Trigger: GCGGAGTGCAGTACTTGCCAACTCTCCCTCCTTGCT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACCTTCCCTGGGTCACGTaGCTGTGGGGATTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHLPWVT*LWGLLA
Trigger: TGCCAACAATCCCCACAGCAACGTGACCCAGGGAAG...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACGGCCTCCACTTCCCGTaGTTGACAGTAGGTACCTGG +
Preference number: 5 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHGLHFP*LTVGTW
Trigger: CCAGGTACCTACTGTCAACAACGGGAAGTGGAGGCC...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554691.5
CDS TCA 90 bp AAGAATTTCTGGAACTGCAACCAACTGGGGGTGTGGCCTCTCGGATaGACTCAGACATTTCAATCCCTCCACCAGGATCACTCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: KNFWNCNQLGVWPLG*TQTFQSLHQDHSVH
Trigger: ATGGACCGAGTGATCCTGGTGGAGGGATTGAAATGTCTGAGTTCATCCGAGAGGCCACACCCCCAGTTGGTTGCAGTTCCAGAAATTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553508.5
ENST00000554879.5
CDS CCA 90 bp TTTCCTGTGCGTCTCCTGCCTGACTTGTGGGCAGAAGCTGTCCGATaGATTACGCTAGAAGATTTAGGTCGAACATCCCCTTCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: FPVRLLPDLWAEAVR*ITLEDLGRTSPSFC
Trigger: GCAAAAGGAAGGGGATGTTCGACCTAAATCTTCTAGCGTAATCCATCGGACAGCTTCTGCCCACAAGTCAGGCAGGAGACGCACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CCA 90 bp TATCATCAATCTGGACCAGAAGCACTGCCTTGTCGATGTGGGATCTaGTACCTGGATCTCTGCTGCAAGGCACCCATCGGTGAATCACAT +
Preference number: 5 (lower is better)
Translates to: YHQSGPEALPCRCGI*YLDLCCKAPIGESH
Trigger: ATGTGATTCACCGATGGGTGCCTTGCAGCAGAGATCCAGGTACCAGATCCCACATCGACAAGGCAGTGCTTCTGGTCCAGATTGATGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCCAGATCCAATCTGGTaGCTTGGATCTAGACCGGCA +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFPDPIW*LGSRPA
Trigger: TGCCGGTCTAGATCCAAGCAACCAGATTGGATCTGG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCCTGAGACCTCTCTGGTaGTGCATCTCATCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCLRPLW*CISSEG
Trigger: CCCCTCTGATGAGATGCACAACCAGAGAGGTCTCAG...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCGTGTTGCACGCTTTTaGCTGGTTCCTTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFRVARF*LVPSGT
Trigger: GGTTCCTGAAGGAACCAGCAAAAAGCGTGCAACACG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCCACATCCACAGGCTTaGCTCTTCGGGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSPHPQA*LFGKSS
Trigger: ACTGCTCTTCCCGAAGAGCAAAGCCTGTGGATGTGG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCTTCCCTGGGTCACGTaGCTGTGGGGATTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCLPWVT*LWGLLA
Trigger: TGCCAACAATCCCCACAGCAACGTGACCCAGGGAAG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACTTCCCTGGGTCACGTaGCTGTGGGGATTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHILPWVT*LWGLLA
Trigger: TGCCAACAATCCCCACAGCAACGTGACCCAGGGAAG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACGCAGGACTTAAGGTGTaGCCTGGCTGTGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHAGLKV*PGCASV
Trigger: CACTGATGCACAGCCAGGCAACACCTTAAGTCCTGC...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCACCAGAAGCACTGCCTaGTCGATGTGGGATCTGGTA +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFTRSTA*SMWDLV
Trigger: TACCAGATCCCACATCGACAAGGCAGTGCTTCTGGT...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCACGCCCAGCAGAGCTaGCTCTGGTGGAGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSHAQQS*LWWREA
Trigger: TGCTTCTCTCCACCAGAGCAAGCTCTGCTGGGCGTG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS TCA 90 bp TCTGGAGGCAAGCAGACCACCTCCATGCCTTCAGTGTTGAACTCATaGGGTTCTGGGTGGCCACAGGCATTGTCCAATATCAAAAGAACT +
Preference number: 5 (lower is better)
Translates to: SGGKQTTSMPSVLNS*GSGWPQALSNIKRT
Trigger: AGTTCTTTTGATATTGGACAATGCCTGTGGCCACCCAGAACCTCATGAGTTCAACACTGAAGGCATGGAGGTGGTCTGCTTGCCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS GCA 90 bp CTGTTGACCCACTACTCCGTGTGCTCAGGCTCCTCAAGCTGTCCATaGTTTTCTCTGCTTTCAAAGGTTTGCTCTTCCCACTTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: LLTHYSVCSGSSSCP*FSLLSKVCSSHFLW
Trigger: CCACAAAAAGTGGGAAGAGCAAACCTTTGAAAGCAGAGAAAAGCATGGACAGCTTGAGGAGCCTGAGCACACGGAGTAGTGGGTCAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS GCA 90 bp TCGGGCACGAGTCTTGGCACTATTTGTGCTAGAAGTCCGTCGTGTTaGACGCTTTTTGCTGGTTCCTTCAGGAACCAAATGAGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: SGTSLGTICARSPSC*TLFAGSFRNQMSFV
Trigger: CACAAAGCTCATTTGGTTCCTGAAGGAACCAGCAAAAAGCGTGCAACACGACGGACTTCTAGCACAAATAGTGCCAAGACTCGTGCCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS GCA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTaGTTGTTCCTCTCTTTTTCCAATGCCTGGATCTCTGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIF*LFLSFSNAWISAAR
Trigger: CCTTGCAGCAGAGATCCAGGCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555780.1
CDS CCA 90 bp GCTCCACTGACTGCATCTTGCTCTTCCCCTTCAGGAAATGCAACCTaGTTTGGCAAGCTATTCCTAGATCGAGTGACTGTCTCTAACTGG +
Preference number: 5 (lower is better)
Translates to: APLTASCSSPSGNAT*FGKLFLDRVTVSNW
Trigger: CCAGTTAGAGACAGTCACTCGATCTAGGAATAGCTTGCCAAACCAGGTTGCATTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS CCA 90 bp CCTCCACTGACTGCATCTTGCTCTTCCCCTTCAGGAAATGCAACCTaGTTTGGCAAGCTATTCCTAGATCGAGTGACTGTCTCTAACTGG +
Preference number: 5 (lower is better)
Translates to: PPLTASCSSPSGNAT*FGKLFLDRVTVSNW
Trigger: CCAGTTAGAGACAGTCACTCGATCTAGGAATAGCTTGCCAAACCAGGTTGCATTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439984.7
ENST00000556846.1
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTGCAGTAGCTTTCTGTaGACCCACTACTCCGTGTGC +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSCSSFL*THYSVC
Trigger: GCACACGGAGTAGTGGGTCAACAGAAAGCTACTGCA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCGTCTCCTGCCTGACTaGTGGGCAGAAGCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNRLLPD*WAEAVR
Trigger: TCGGACAGCTTCTGCCCACAAGTCAGGCAGGAGACG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCGGGTTACTCCCTGCATaGTGCCGGCGCCGTACTGCC +
Preference number: 5 (lower is better)
Translates to: TRKYICPYLWFILNAGKGGLLPA*CRRRTA
Trigger: GGCAGTACGGCGCCGGCACAATGCAGGGAGTAACCC...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGGCCTCCACTTCCCGTaGTTGACAGTAGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCGLHFP*LTVGTS
Trigger: AGAGGTACCTACTGTCAACAACGGGAAGTGGAGGCC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCCACATCCACAGGCTTaGCTCTTCGGGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCPHPQA*LFGKSS
Trigger: ACTGCTCTTCCCGAAGAGCAAAGCCTGTGGATGTGG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAAGCAAGGAGGGAGAGTaGGCAAGTACTGCACTCCGC +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGSKEGE*ASTALR
Trigger: GCGGAGTGCAGTACTTGCCAACTCTCCCTCCTTGCT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTACCAGAAGCACTGCCTaGTCGATGTGGGATCTGGTA +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSTRSTA*SMWDLV
Trigger: TACCAGATCCCACATCGACAAGGCAGTGCTTCTGGT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS GCA 90 bp TTTCAGGTGCCATTAACCTGTTTGAGTCATTCAAACATGCTACTGTaGCACTGTCCAGGCTCAACACTCGGGCACGAGTCTTGGCACTAT +
Preference number: 5 (lower is better)
Translates to: FQVPLTCLSHSNMLL*HCPGSTLGHESWHY
Trigger: ATAGTGCCAAGACTCGTGCCCGAGTGTTGAGCCTGGACAGTGGCACAGTAGCATGTTTGAATGACTCAAACAGGTTAATGGCACCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
ENST00000556846.1
CDS GCA 90 bp ATGCTACCTCTCTCTGGGTTACGGTTACGTAGAAAAACAAGCTCCTaGTGTTGCCCTGCCCAAAGACCTCGGACACATTCCTTATTCACT +
Preference number: 5 (lower is better)
Translates to: MLPLSGLRLRRKTSS*CCPAQRPRTHSLFT
Trigger: AGTGAATAAGGAATGTGTCCGAGGTCTTTGGGCAGGGCAACAGCAGGAGCTTGTTTTTCTACGTAACCGTAACCCAGAGAGAGGTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 90 bp GAACTTACCTCCACTGACTGCATCTTGCTCTTCCCCTTCAGGAAATaGAACCTGGTTTGGCAAGCTATTCCTAGATCGAGTGACTGTCTC +
Preference number: 5 (lower is better)
Translates to: ELTSTDCILLFPFRK*NLVWQAIPRSSDCL
Trigger: GAGACAGTCACTCGATCTAGGAATAGCTTGCCAAACCAGGTTGCATTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGGAGGTAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439984.7
ENST00000556846.1
CDS CCA 90 bp GTGAGTGTAAAGGTACAAGAGAAGCTACTTCTGTGTCACAGGCGCTaGACAGAGACTGATCAACATGGTGGTGGTGGTTATGACTTGGCA +
Preference number: 5 (lower is better)
Translates to: VSVKVQEKLLLCHRR*TETDQHGGGGYDLA
Trigger: TGCCAAGTCATAACCACCACCACCATGTTGATCAGTCTCTGTCCAGCGCCTGTGACACAGAAGTAGCTTCTCTTGTACCTTTACACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553272.6
ENST00000553428.2
ENST00000554879.5
CDS CCA 90 bp ACCTGGTTTGGCAAGCTATTCCTAGATCGAGTGACTGTCTCTAACTaGGAAGCCCGTCCTAATAAAGATAGCTCATCTAGCACCTCTCCC +
Preference number: 5 (lower is better)
Translates to: TWFGKLFLDRVTVSN*EARPNKDSSSSTSP
Trigger: GGGAGAGGTGCTAGATGAGCTATCTTTATTAGGACGGGCTTCCCAGTTAGAGACAGTCACTCGATCTAGGAATAGCTTGCCAAACCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
ENST00000556846.1
CDS CCA 90 bp TTTGGACTCTGTAAATCACTTCTGCCTTTCTGGAGTGTGAATTGTTaGCAGGACTTAAGGTGTTGCCTGGCTGTGCATCAGTGGCACTGC +
Preference number: 5 (lower is better)
Translates to: FGLCKSLLPFWSVNC*QDLRCCLAVHQWHC
Trigger: GCAGTGCCACTGATGCACAGCCAGGCAACACCTTAAGTCCTGCCAACAATTCACACTCCAGAAAGGCAGAAGTGATTTACAGAGTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCCAGATCCAATCTGGTaGCTTGGATCTAGACCGGCA +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCPDPIW*LGSRPA
Trigger: TGCCGGTCTAGATCCAAGCAACCAGATTGGATCTGG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCCTTGGCAGGTTCACTTaGTCACTGAAGTCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCLGRFT*SLKSLG
Trigger: GCCAAGGGACTTCAGTGACAAAGTGAACCTGCCAAG...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAGGTGGTGGTTATGACTaGGCAGGTTCACTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEGGGYD*AGSLCH
Trigger: GTGACAAAGTGAACCTGCCAAGTCATAACCACCACC...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTGCAGTAGCTTTCTGTaGACCCACTACTCCGTGTGC +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCCSSFL*THYSVC
Trigger: GCACACGGAGTAGTGGGTCAACAGAAAGCTACTGCA...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCTGTGGACTGCTGGCCTaGCTGACCATCTTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSCGLLA*LTILKA
Trigger: AGCCTTCAAGATGGTCAGCAAGGCCAGCAGTCCACA...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTGGGGATTGTTGGCAGTaGTTGCATTGTTACCAGTGC +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSGDCWQ*LHCYQC
Trigger: GCACTGGTAACAATGCAACAACTGCCAACAATCCCC...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACACGTTGCTGTGGGGATaGTTGGCAGTTGTTGCATTG +
Preference number: 5 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHTLLWG*LAVVAL
Trigger: CAATGCAACAACTGCCAACAATCCCCACAGCAACGT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGCAGGACTTAAGGTGTaGCCTGGCTGTGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSAGLKV*PGCASV
Trigger: CACTGATGCACAGCCAGGCAACACCTTAAGTCCTGC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCTCCACTTCCCGTTGTaGACAGTAGGTACCTGGATT +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSLHFPL*TVGTWI
Trigger: AATCCAGGTACCTACTGTCAACAACGGGAAGTGGAG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554691.5
CDS GCA 90 bp TCACGTTGCTGTGGGGATTGTTGGCAGTTGTTGCATTGTTACCAGTaGAGGAAGTCCCACCTCCAGTATCAGAATCTTCAATATTGCCAC +
Preference number: 5 (lower is better)
Translates to: SRCCGDCWQLLHCYQ*RKSHLQYQNLQYCH
Trigger: GTGGCAATATTGAAGATTCTGATACTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 90 bp GACTGGGATCCACAATTTGGACTCTGTAAATCACTTCTGCCTTTCTaGAGTGTGAATTGTTGGCAGGACTTAAGGTGTTGCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: DWDPQFGLCKSLLPF*SVNCWQDLRCCLAV
Trigger: CACAGCCAGGCAACACCTTAAGTCCTGCCAACAATTCACACTCCAGAAAGGCAGAAGTGATTTACAGAGTCCAAATTGTGGATCCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCTCCTGGTTGAACAGTaGCCTTGTTCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSLLVEQ*PCSALV
Trigger: AACCAAAGCTGAACAAGGCAACTGTTCAACCAGGAG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAATCCAATCTGGTTGCTaGGATCTAGACCGGCATAAG +
Preference number: 5 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEIQSGC*DLDRHK
Trigger: CTTATGCCGGTCTAGATCCAAGCAACCAGATTGGAT...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTCCACCAAGGATTCTTaGGATCCAGAAAGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSSTKDS*DPERGL
Trigger: CAAGCCTCTTTCTGGATCCAAAGAATCCTTGGTGGA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCTGCTCTCTATGTGAGTaGAGCTGGTCTGCTCACTTT +
Preference number: 5 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCCSLCE*SWSAHF
Trigger: AAAGTGAGCAGACCAGCTCAACTCACATAGAGAGCA...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTGCTCTCTATGTGAGTaGAGCTGGTCTGCTCACTTT +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSCSLCE*SWSAHF
Trigger: AAAGTGAGCAGACCAGCTCAACTCACATAGAGAGCA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGCCTCCTCGCTGGCTaGTGCTGCTCCACTGACTGC +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLCLLAG*CCSTDC
Trigger: GCAGTCAGTGGAGCAGCACAAGCCAGCGAGGAGGCA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTAGCAAGGAGGGAGAGTaGGCAAGTACTGCACTCCGC +
Preference number: 5 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLSKEGE*ASTALR
Trigger: GCGGAGTGCAGTACTTGCCAACTCTCCCTCCTTGCT...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTCTCAGGGCTTGCTTaGCATTTTGGATGCTACCTC +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSFSGLA*HFGCYL
Trigger: GAGGTAGCATCCAAAATGCAAAGCAAGCCCTGAGAA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTCTGGAGTGTGAATTGTaGGCAGGACTTAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSLECEL*AGLKVL
Trigger: CAACACCTTAAGTCCTGCCAACAATTCACACTCCAG...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGATCCCTTCCAGAATTaGACTGGGATCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFDPFQN*TGIHNL
Trigger: CAAATTGTGGATCCCAGTCAAATTCTGGAAGGGATC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCACCAGAAGCACTGCCTaGTCGATGTGGGATCTGGTA +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSTRSTA*SMWDLV
Trigger: TACCAGATCCCACATCGACAAGGCAGTGCTTCTGGT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCATGCAGAGCTCATaGCCAGACTTGTATAGGTTT +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFLMQSS*PDLYRF
Trigger: AAACCTATACAAGTCTGGCAATGAGCTCTGCATGAG...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS TCA 90 bp GCTAGAAGAGCTATCACTGCTGAACTGGTGAGCAGACTGAACACTTaGTGCTCTACTCAAGTCACTCTGATCACTAGAGTCTTCGTCATG +
Preference number: 5 (lower is better)
Translates to: ARRAITAELVSRLNT*CSTQVTLITRVFVM
Trigger: CATGACGAAGACTCTAGTGATCAGAGTGACTTGAGTAGAGCATCAAGTGTTCAGTCTGCTCACCAGTTCAGCAGTGATAGCTCTTCTAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS-3UTR CAA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATCTTGGCAGGTTCACTTaGTCACTGAAGTCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNLGRFT*SLKSLG
Trigger: GCCAAGGGACTTCAGTGACAAAGTGAACCTGCCAAG...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAGGTGGTGGTTATGACTaGGCAGGTTCACTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGGGGYD*AGSLCH
Trigger: GTGACAAAGTGAACCTGCCAAGTCATAACCACCACC...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAGCATGGGGATTTTTATaGGCTTCTTCAGATGCAGAG +
Preference number: 5 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEAWGFL*ASSDAE
Trigger: CTCTGCATCTGAAGAAGCCAATAAAAATCCCCATGC...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCACTCGGGCACGAGTCTaGGCACTATTTGTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSTRARV*ALFVLE
Trigger: TTCTAGCACAAATAGTGCCAAGACTCGTGCCCGAGT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAGCACCTCTCCCTCTTaGGCCTCAAGATCTGATTTT +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCSTSPS*ASRSDF
Trigger: AAAATCAGATCTTGAGGCCAAAGAGGGAGAGGTGCT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCTCCACTGACTGCATCTaGCTCTTCCCCTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSSTDCI*LFPFRK
Trigger: TTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGGA...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAAGTATACAACACATACTaGAGGGCAGGCTGCAATACT +
Preference number: 5 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEVYNTY*RAGCNT
Trigger: AGTATTGCAGCCTGCCCTCAAGTATGTGTTGTATAC...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTCTCAGGGCTTGCTTaGCATTTTGGATGCTACCTC +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCFSGLA*HFGCYL
Trigger: GAGGTAGCATCCAAAATGCAAAGCAAGCCCTGAGAA...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTGTCAGAGTAAGAAGTaGTCAGGGGTGAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHCQSKK*SGVRQR
Trigger: TCTTTGTCTCACCCCTGACAACTTCTTACTCTGACA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATATTGGCAGTTGTTGCATaGTTACCAGTGCAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHILAVVA*LPVQEV
Trigger: GACTTCCTGCACTGGTAACAATGCAACAACTGCCAA...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGGGGATTGTTGGCAGTaGTTGCATTGTTACCAGTGC +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSGDCWQ*LHCYQC
Trigger: GCACTGGTAACAATGCAACAACTGCCAACAATCCCC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCACGTTGCTGTGGGGATaGTTGGCAGTTGTTGCATTG +
Preference number: 5 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCTLLWG*LAVVAL
Trigger: CAATGCAACAACTGCCAACAATCCCCACAGCAACGT...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTGCAGGACTTAAGGTGTaGCCTGGCTGTGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLAGLKV*PGCASV
Trigger: CACTGATGCACAGCCAGGCAACACCTTAAGTCCTGC...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTCTGGAGTGTGAATaGTTGGCAGGACTTAAGGTG +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSFLECE*LAGLKV
Trigger: CACCTTAAGTCCTGCCAACAATTCACACTCCAGAAA...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCGGCTATAAGCTAAACTaGCTGAAAAATGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFGYKLN*LKNVRL
Trigger: CAGCCTCACATTTTTCAGCAAGTTTAGCTTATAGCC...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCCCACTGAATCATAAATaGTCAGGTACAGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCPLNHK*SGTELR
Trigger: CCTCAGCTCTGTACCTGACAATTTATGATTCAGTGG...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS GCA 90 bp GGAAGTAAATTCATTTGCATGGGGATTTTTATTGGCTTCTTCAGATaGAGAGGTGCTGAGACCTCTCTGGTTGTGCATCTCATCAGAGGG +
Preference number: 5 (lower is better)
Translates to: GSKFICMGIFIGFFR*RGAETSLVVHLIRG
Trigger: CCCTCTGATGAGATGCACAACCAGAGAGGTCTCAGCACCTCTGCATCTGAAGAAGCCAATAAAAATCCCCATGCAAATGAATTTACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CCA 90 bp CAAGCAGACCACCTCCATGCCTTCAGTGTTGAACTCATGAGGTTCTaGGTGGCCACAGGCATTGTCCAATATCAAAAGAACTTTAAAAGA +
Preference number: 5 (lower is better)
Translates to: QADHLHAFSVELMRF*VATGIVQYQKNFKR
Trigger: TCTTTTAAAGTTCTTTTGATATTGGACAATGCCTGTGGCCACCCAGAACCTCATGAGTTCAACACTGAAGGCATGGAGGTGGTCTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACTCCTGGTTGAACAGTaGCCTTGTTCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGLLVEQ*PCSALV
Trigger: AACCAAAGCTGAACAAGGCAACTGTTCAACCAGGAG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCATCCAATCTGGTTGCTaGGATCTAGACCGGCATAAG +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSIQSGC*DLDRHK
Trigger: CTTATGCCGGTCTAGATCCAAGCAACCAGATTGGAT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAACATCCCCTTCCTTTaGCTTTCCACCAACATCTTT +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSNIPFL*LSTNIF
Trigger: AAAGATGTTGGTGGAAAGCAAAAGGAAGGGGATGTT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCGTCTCCTGCCTGACTaGTGGGCAGAAGCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYRLLPD*WAEAVR
Trigger: TCGGACAGCTTCTGCCCACAAGTCAGGCAGGAGACG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTCGTGTTGCACGCTTTTaGCTGGTTCCTTCAGGAACC +
Preference number: 5 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLRVARF*LVPSGT
Trigger: GGTTCCTGAAGGAACCAGCAAAAAGCGTGCAACACG...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCTATTGGATGCTCTTCTaGCTGCTGGTTCAAAATTCA +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFYWMLF*LLVQNS
Trigger: TGAATTTTGAACCAGCAGCAAGAAGAGCATCCAATA...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGTGTTTAACCTTTaGGGCAGCTTCTTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHIVFNL*GSFFCW
Trigger: CCAACAGAAGAAGCTGCCCAAAAGGTTAAACACTAT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGTATACAACACATACTaGAGGGCAGGCTGCAATACT +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCVYNTY*RAGCNT
Trigger: AGTATTGCAGCCTGCCCTCAAGTATGTGTTGTATAC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACCGAAGATCAAAGACTaGAAGCATAGAAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIPKIKD*KHRSST
Trigger: AGTGCTGCTTCTATGCTTCAAGTCTTTGATCTTCGG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCACTAGGGATGAATCTTaGTCCACATCCACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCTRDES*STSTGF
Trigger: AAAGCCTGTGGATGTGGACAAAGATTCATCCCTAGT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGATTCTCAGGGCTTGCTTaGCATTTTGGATGCTACCTC +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGFSGLA*HFGCYL
Trigger: GAGGTAGCATCCAAAATGCAAAGCAAGCCCTGAGAA...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACATGTTTCTCAGGGCTaGCTTTGCATTTTGGATGCT +
Preference number: 5 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIHVSQG*LCILDA
Trigger: AGCATCCAAAATGCAAAGCAAGCCCTGAGAAACATG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATATGTCAGAGTAAGAAGTaGTCAGGGGTGAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHICQSKK*SGVRQR
Trigger: TCTTTGTCTCACCCCTGACAACTTCTTACTCTGACA...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGATTGTTGGCAGTTGTaGCATTGTTACCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSDCWQL*HCYQCR
Trigger: CCTGCACTGGTAACAATGCAACAACTGCCAACAATC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TCTTATGCTCTATCACTACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCACTGGGATCCACAATTaGGACTCTGTAAATCACTTC +
Preference number: 5 (lower is better)
Translates to: SYALSLLCCEFRGTTSLCTGIHN*DSVNHF
Trigger: GAAGTGATTTACAGAGTCCAAATTGTGGATCCCAGT...GCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTAGTGATAGAGCATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAATGTACCACATTAGCCTaGACTGACGTTATTATCTCC +
Preference number: 5 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQECTTLA*TDVIIS
Trigger: GGAGATAATAACGTCAGTCAAGGCTAATGTGGTACA...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTGTCTTTTCTCCTGGTaGAACAGTTGCCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCCLFSW*NSCLVQ
Trigger: CTGAACAAGGCAACTGTTCAACCAGGAGAAAAGACA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCACATCTTTACGCACTTaGGAATCCACAGAAACAGCT +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCTSLRT*ESTETA
Trigger: AGCTGTTTCTGTGGATTCCAAAGTGCGTAAAGATGT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATAGCACCTCTCCCTCTTaGGCCTCAAGATCTGATTTT +
Preference number: 5 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSTSPS*ASRSDF
Trigger: AAAATCAGATCTTGAGGCCAAAGAGGGAGAGGTGCT...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTTCCACTGACTGCATCTaGCTCTTCCCCTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLSTDCI*LFPFRK
Trigger: TTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGGA...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTAGTTCCCAAAGCTTGTaGAAGAGTATGGACATAAAG +
Preference number: 5 (lower is better)
Translates to: LPHRIKVIPAGIFCLFLSSSQSL*KSMDIK
Trigger: CTTTATGTCCATACTCTTCAACAAGCTTTGGGAACT...AGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACAAGCCAATCTGGTATTaGAATGATCCACTCGTTTTG +
Preference number: 5 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHKPIWY*NDPLVL
Trigger: CAAAACGAGTGGATCATTCAAATACCAGATTGGCTT...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCAAAGTGACCAGACCATaGCCTATCTCTATAAGGTGT +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCKVTRP*PISIRC
Trigger: ACACCTTATAGAGATAGGCAATGGTCTGGTCACTTT...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGGCCTCCACTTCCCGTaGTTGACAGTAGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLGLHFP*LTVGTS
Trigger: AGAGGTACCTACTGTCAACAACGGGAAGTGGAGGCC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCCGAAGATCAAAGACTaGAAGCATAGAAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSPKIKD*KHRSST
Trigger: AGTGCTGCTTCTATGCTTCAAGTCTTTGATCTTCGG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAACTAGGGATGAATCTTaGTCCACATCCACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGTRDES*STSTGF
Trigger: AAAGCCTGTGGATGTGGACAAAGATTCATCCCTAGT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTTGGCAGTTGTTGCATaGTTACCAGTGCAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNLAVVA*LPVQEV
Trigger: GACTTCCTGCACTGGTAACAATGCAACAACTGCCAA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAAGGGGATTGTTGGCAGTaGTTGCATTGTTACCAGTGC +
Preference number: 5 (lower is better)
Translates to: TELSYNLVVTISSSSTKEGDCWQ*LHCYQC
Trigger: GCACTGGTAACAATGCAACAACTGCCAACAATCCCC...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCTTTCTGGAGTGTGAATaGTTGGCAGGACTTAAGGTG +
Preference number: 5 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCFLECE*LAGLKV
Trigger: CACCTTAAGTCCTGCCAACAATTCACACTCCAGAAA...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCGATCCCTTCCAGAATTaGACTGGGATCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCDPFQN*TGIHNL
Trigger: CAAATTGTGGATCCCAGTCAAATTCTGGAAGGGATC...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TACTCTGTTGTGAATTCCGGGGCACCACCTCATTGTGCAGGTAAAACTCAGGAATTTGTTCCTTCTAGCTaGGCTCCACTGAATCATAAA +
Preference number: 5 (lower is better)
Translates to: YSVVNSGAPPHCAGKTQEFVPSS*APLNHK
Trigger: TTTATGATTCAGTGGAGCCAAGCTAGAAGGAACAAA...TTCCTGAGTTTTACCTGCACAATGAGGTGGTGCCCCGGAATTCACAACAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCAGCTCATTGCCAGACTaGTATAGGTTTAATCAGTTT +
Preference number: 5 (lower is better)
Translates to: QSLPHRIKVIPAGIFCLFSSLPD*YRFNQF
Trigger: AAACTGATTAAACCTATACAAGTCTGGCAATGAGCT...GAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS TCA 90 bp CCAGATATTGGATGCTCTTCTTGCTGCTGGTTCAAAATTCACAAGTaGCATATCACAGCCACCAGTCTCATACAGCGTAGAAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: PDIGCSSCCWFKIHK*HITATSLIQRRREL
Trigger: AAGTTCTCTTCTACGCTGTATGAGACTGGTGGCTGTGATATGTCACTTGTGAATTTTGAACCAGCAGCAAGAAGAGCATCCAATATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556846.1
CDS GCA 90 bp CGATGGATTACGCTAGAAGATTTAGGTCGAACATCCCCTTCCTTTTaGTTTCCACCAACATCTTTACGCACTTTGGAATCCACAGAAACA +
Preference number: 5 (lower is better)
Translates to: RWITLEDLGRTSPSF*FPPTSLRTLESTET
Trigger: TGTTTCTGTGGATTCCAAAGTGCGTAAAGATGTTGGTGGAAAGCAAAAGGAAGGGGATGTTCGACCTAAATCTTCTAGCGTAATCCATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CCA 90 bp ACTCTGATCACTAGAGTCTTCGTCATGACAAAATATAGCACTGTGTaGCTTGGTACCAGAAACACCTCGAAAGCAAACATAGTCCCTATG +
Preference number: 5 (lower is better)
Translates to: TLITRVFVMTKYSTV*LGTRNTSKANIVPM
Trigger: CATAGGGACTATGTTTGCTTTCGAGGTGTTTCTGGTACCAAGCCACACAGTGCTATATTTTGTCATGACGAAGACTCTAGTGATCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CCA 90 bp CATCTAGCACCTCTCCCTCTTTGGCCTCAAGATCTGATTTTGAAGTaGTTAAGGGCTTTATACTTTCAGGTGCCATTAACCTGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: HLAPLPLWPQDLILK*LRALYFQVPLTCLS
Trigger: ACTCAAACAGGTTAATGGCACCTGAAAGTATAAAGCCCTTAACCACTTCAAAATCAGATCTTGAGGCCAAAGAGGGAGAGGTGCTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
ENST00000556846.1
CDS CCA 90 bp GTTGACAGTAGGTACCTGGATTTCTATCAAGCTGGGAAGCCAATCTaGTATTTGAATGATCCACTCGTTTTGTGTTATAGTCTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: VDSRYLDFYQAGKPI*YLNDPLVLCYSLSP
Trigger: GGGAGAGAGACTATAACACAAAACGAGTGGATCATTCAAATACCAGATTGGCTTCCCAGCTTGATAGAAATCCAGGTACCTACTGTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554691.5
CDS-3UTR CAA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCATCAGCTGCCAAATCTaGTTCTTCACTTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCISCQI*FFTSFL
Trigger: AAGGAAGGAAGTGAAGAACAAGATTTGGCAGCTGAT...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTTCCACCAAGGATTCTTaGGATCCAGAAAGAGGCTTG +
Preference number: 5 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLSTKDS*DPERGL
Trigger: CAAGCCTCTTTCTGGATCCAAAGAATCCTTGGTGGA...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGAACATCCCCTTCCTTTaGCTTTCCACCAACATCTTT +
Preference number: 5 (lower is better)
Translates to: HSTITFLSKEGVAEELNKNIPFL*LSTNIF
Trigger: AAAGATGTTGGTGGAAAGCAAAAGGAAGGGGATGTT...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATACCTCAAGATCTGATTTaGAAGTGGTTAAGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIPQDLI*KWLRAL
Trigger: TAAAGCCCTTAACCACTTCAAAATCAGATCTTGAGG...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTCTGTGTCACAGATATaGGATGCTCTTCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSVSQI*DALLAA
Trigger: AGCAGCAAGAAGAGCATCCAATATCTGTGACACAGA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAAGTAGTTCCCAAAGCTaGTTGAAGAGTATGGACATA +
Preference number: 5 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHISSSQS*LKSMDI
Trigger: TATGTCCATACTCTTCAACAAGCTTTGGGAACTACT...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCCACATCCACAGGCTTaGCTCTTCGGGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYPHPQA*LFGKSS
Trigger: ACTGCTCTTCCCGAAGAGCAAAGCCTGTGGATGTGG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAGGGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACTCCATTCATCTCGAATaGAAGAAATACGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: KGKGEVLNQAHSIFSRSHSIHLE*KKYGNL
Trigger: GAGATTTCCGTATTTCTTCAATTCGAGATGAATGGA...GTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACGATTGTTGGCAGTTGTaGCATTGTTACCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHDCWQL*HCYQCR
Trigger: CCTGCACTGGTAACAATGCAACAACTGCCAACAATC...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCACTGGGATCCACAATTaGGACTCTGTAAATCACTTC +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSTGIHN*DSVNHF
Trigger: GAAGTGATTTACAGAGTCCAAATTGTGGATCCCAGT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS TCA 90 bp ACAGATATTGGATGCTCTTCTTGCTGCTGGTTCAAAATTCACAAGTaGCATATCACAGCCACCAGTCTCATACAGCGTAGAAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: TDIGCSSCCWFKIHK*HITATSLIQRRREL
Trigger: AAGTTCTCTTCTACGCTGTATGAGACTGGTGGCTGTGATATGTCACTTGTGAATTTTGAACCAGCAGCAAGAAGAGCATCCAATATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS TCA 90 bp TCGAATCTGTGGGAGAGAGAGCACATCATGTGGATAAAATCGAACTaGGGTAGAACTGGATACATGAGAATCTGTGTCACAGATATTGGA +
Preference number: 5 (lower is better)
Translates to: SNLWEREHIMWIKSN*GRTGYMRICVTDIG
Trigger: TCCAATATCTGTGACACAGATTCTCATGTATCCAGTTCTACCTCAGTTCGATTTTATCCACATGATGTGCTCTCTCTCCCACAGATTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS GCA 90 bp TATCCAGTTGAGGTAAATCACACAGAAACTCTCCCTAGATATGCCTaGCAGTCGGTGGTCATAGTCTTCATCAATGTTTGGATTAAAGGT +
Preference number: 5 (lower is better)
Translates to: YPVEVNHTETLPRYA*QSVVIVFINVWIKG
Trigger: ACCTTTAATCCAAACATTGATGAAGACTATGACCACCGACTGGCAGGCATATCTAGGGAGAGTTTCTGTGTGATTTACCTCAACTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS CCA 90 bp CAGGGCTTAGATCAATGTCCTGTTGCTCCAACAAATCTGTATCAATaGTCAATAGTCTATTCAATCGAATCTGTGGGAGAGAGAGCACAT +
Preference number: 5 (lower is better)
Translates to: QGLDQCPVAPTNLYQ*SIVYSIESVGERAH
Trigger: ATGTGCTCTCTCTCCCACAGATTCGATTGAATAGACTATTGACCATTGATACAGATTTGTTGGAGCAACAGGACATTGATCTAAGCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS CCA 90 bp TGTTGTCATCTGATCCTGGATTTCTATCAAGCTGGGAAGCCAATCTaGTATTTGAATGATCCACTCGTTTTGTGTTATAGTCTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: CCHLILDFYQAGKPI*YLNDPLVLCYSLSP
Trigger: GGGAGAGAGACTATAACACAAAACGAGTGGATCATTCAAATACCAGATTGGCTTCCCAGCTTGATAGAAATCCAGGATCAGATGACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000556516.1
CDS-3UTR CAA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAATGTCTTTTCTCCTGGTaGAACAGTTGCCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: TELSYNLVVTISSSSTKECLFSW*NSCLVQ
Trigger: CTGAACAAGGCAACTGTTCAACCAGGAGAAAAGACA...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGATCCAGAAAGAGGCTaGGAAGATTCTAACTCACTA +
Preference number: 5 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNDPERG*EDSNSL
Trigger: TAGTGAGTTAGAATCTTCCAAGCCTCTTTCTGGATC...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAATAGCACTGTGTGGCTaGGTACCAGAAACACCTCGA +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLIALCG*VPETPR
Trigger: TCGAGGTGTTTCTGGTACCAAGCCACACAGTGCTAT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp CATTCCACGATTACCTTTCTCTCAAAAGAGGGGGTGGCGGAAGAATTAAACAAGCCTCAAGATCTGATTTaGAAGTGGTTAAGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: HSTITFLSKEGVAEELNKPQDLI*KWLRAL
Trigger: TAAAGCCCTTAACCACTTCAAAATCAGATCTTGAGG...CTTGTTTAATTCTTCCGCCACCCCCTCTTTTGAGAGAAAGGTAATCGTGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAACCTACAGCAGATGCATaGTCATGTGATGCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: TELSYNLVVTISSSSTKEPTADA*SCDASK
Trigger: CTTAGAAGCATCACATGACAATGCATCTGCTGTAGG...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCCCATATAATTTGAACTaGGTTGCAGTCAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSPYNLN*VAVRFL
Trigger: CAGAAACCTGACTGCAACCAAGTTCAAATTATATGG...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGTTATTCCATATAATTaGAACTTGGTTGCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIVIPYN*NLVAVR
Trigger: CCTGACTGCAACCAAGTTCAAATTATATGGAATAAC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TATTTTCAGTCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCGTTATTCCATATAATTaGAACTTGGTTGCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: YFQSLPHRIKVIPAGIFCVIPYN*NLVAVR
Trigger: CCTGACTGCAACCAAGTTCAAATTATATGGAATAAC...GCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGACTGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAAGTTCCCAAAGCTTGTaGAAGAGTATGGACATAAAG +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGSSQSL*KSMDIK
Trigger: CTTTATGTCCATACTCTTCAACAAGCTTTGGGAACT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAGTTCCCAAAGCTTGTaGAAGAGTATGGACATAAAG +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSSSQSL*KSMDIK
Trigger: CTTTATGTCCATACTCTTCAACAAGCTTTGGGAACT...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATGCAGTAGTTCCCAAAGCTaGTTGAAGAGTATGGACATA +
Preference number: 5 (lower is better)
Translates to: DQSDTCRHLLLVPLFFQCSSSQS*LKSMDI
Trigger: TATGTCCATACTCTTCAACAAGCTTTGGGAACTACT...GCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAAAGCCAATCTGGTATTaGAATGATCCACTCGTTTTG +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGKPIWY*NDPLVL
Trigger: CAAAACGAGTGGATCATTCAAATACCAGATTGGCTT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCTCAGAATCTTCAATATaGCCACCACTGTTACATCCA +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSSESSI*PPLLHP
Trigger: TGGATGTAACAGTGGTGGCAATATTGAAGATTCTGA...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAACGTTGCTGTGGGGATaGTTGGCAGTTGTTGCATTG +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLTLLWG*LAVVAL
Trigger: CAATGCAACAACTGCCAACAATCCCCACAGCAACGT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp ACAGAGTTGTCATATAACCTTGTGGTGACAATCAGCTCTAGTTCCACCAAAGAATTTCTGGAGTGTGAATaGTTGGCAGGACTTAAGGTG +
Preference number: 5 (lower is better)
Translates to: TELSYNLVVTISSSSTKEFLECE*LAGLKV
Trigger: CACCTTAAGTCCTGCCAACAATTCACACTCCAGAAA...TTCTTTGGTGGAACTAGAGCTGATTGTCACCACAAGGTTATATGACAACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTGATCCCTTCCAGAATTaGACTGGGATCCACAATTTG +
Preference number: 5 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLDPFQN*TGIHNL
Trigger: CAAATTGTGGATCCCAGTCAAATTCTGGAAGGGATC...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp GGCAAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGATGTACAATTTTCTTaGGAGTTTCACACCAAAAGG +
Preference number: 5 (lower is better)
Translates to: GKGEVLNQAHSIFSRSHIDVQFS*EFHTKR
Trigger: CCTTTTGGTGTGAAACTCCAAAGAAAATTGTACATC...TATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGAACCCCAGAAAAGGCTTaGTCCATATTCATGACAAAT +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGTPEKA*SIFMTN
Trigger: ATTTGTCATGAATATGGACAAAGCCTTTTCTGGGGT...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp AAAGGAGAGGTGCTTAACCAAGCTCATTCTATTTTCAGTCGCTCCCACATAGGACCAAAGAATGTAAGGTaGATTCCACAAAATGGCAGA +
Preference number: 5 (lower is better)
Translates to: KGEVLNQAHSIFSRSHIGPKNVR*IPQNGR
Trigger: TCTGCCATTTTGTGGAATCAACCTTACATTCTTTGG...TCCTATGTGGGAGCGACTGAAAATAGAATGAGCTTGGTTAAGCACCTCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS TCA 90 bp GTAGGTACCTGGATTTCTATCAAGCTGGGAAGCCAATCTGGTATTTaGATGATCCACTCGTTTTGTGTTATAGTCTCTCTCCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: VGTWISIKLGSQSGI*MIHSFCVIVSLPEF
Trigger: AAATTCTGGGAGAGAGACTATAACACAAAACGAGTGGATCATTCAAATACCAGATTGGCTTCCCAGCTTGATAGAAATCCAGGTACCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554691.5
CDS GCA 90 bp CATCTTCAGAACAATGAAAACAGCAGCTATCACAGGACAATAAACTaGTACTATAATCATGGTAGAAGGAAGGGCCATGTAGAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: HLQNNENSSYHRTIN*YYNHGRRKGHVEGE
Trigger: TTCACCCTCTACATGGCCCTTCCTTCTACCATGATTATAGTAGCAGTTTATTGTCCTGTGATAGCTGCTGTTTTCATTGTTCTGAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS-3UTR CAA 90 bp TATTTACAAGCTGTTCAGAATAACACTCAGACACACACACACTCACAGACACACACATCTTTACGCACTTaGGAATCCACAGAAACAGCT +
Preference number: 5 (lower is better)
Translates to: YLQAVQNNTQTHTHSQTHTSLRT*ESTETA
Trigger: AGCTGTTTCTGTGGATTCCAAAGTGCGTAAAGATGT...GTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATTCTGAACAGCTTGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATATAGCACTGTGTGGCTaGGTACCAGAAACACCTCGA +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYIALCG*VPETPR
Trigger: TCGAGGTGTTTCTGGTACCAAGCCACACAGTGCTAT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATACTCGGGCACGAGTCTaGGCACTATTTGTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYTRARV*ALFVLE
Trigger: TTCTAGCACAAATAGTGCCAAGACTCGTGCCCGAGT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTATTGGATGCTCTTCTaGCTGCTGGTTCAAAATTCA +
Preference number: 5 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNYWMLF*LLVQNS
Trigger: TGAATTTTGAACCAGCAGCAAGAAGAGCATCCAATA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp CATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCGTTATTCCATATAATTaGAACTTGGTTGCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: HRIKVIPAGIFCLFLSFSVIPYN*NLVAVR
Trigger: CCTGACTGCAACCAAGTTCAAATTATATGGAATAAC...GGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTCAGAATCTTCAATATaGCCACCACTGTTACATCCA +
Preference number: 5 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSESSI*PPLLHP
Trigger: TGGATGTAACAGTGGTGGCAATATTGAAGATTCTGA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTGGCAGTTGTTGCATaGTTACCAGTGCAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLLAVVA*LPVQEV
Trigger: GACTTCCTGCACTGGTAACAATGCAACAACTGCCAA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AGGATCAAAGTGATACCTGCAGGCATCTTCTGCTTGTTCCTCTCTTTTTCCAATTCTTTTTCCAATGCCTaGGAATTGAGAGGGAAAAAG +
Preference number: 5 (lower is better)
Translates to: RIKVIPAGIFCLFLSFSNSFSNA*ELRGKK
Trigger: CTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGA...ATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS CCA 90 bp GCCAAATCTTGTTCTTCACTTCCTTCCTTACAAAGACTAGAACTTTaGCCCAGACTTAAACTGATATCATCAGAAGTCTTAGCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: AKSCSSLPSLQRLEL*PRLKLISSEVLAVS
Trigger: AGACACTGCTAAGACTTCTGATGATATCAGTTTAAGTCTGGGCCAAAGTTCTAGTCTTTGTAAGGAAGGAAGTGAAGAACAAGATTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553272.6
ENST00000554879.5
CDS-3UTR CAA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCATCAGCTGCCAAATCTaGTTCTTCACTTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TRKYICPYLWFILNAGKGISCQI*FFTSFL
Trigger: AAGGAAGGAAGTGAAGAACAAGATTTGGCAGCTGAT...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGCATGGGGATTTTTATaGGCTTCTTCAGATGCAGAG +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLAWGFL*ASSDAE
Trigger: CTCTGCATCTGAAGAAGCCAATAAAAATCCCCATGC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAGTATACAACACATACTaGAGGGCAGGCTGCAATACT +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLVYNTY*RAGCNT
Trigger: AGTATTGCAGCCTGCCCTCAAGTATGTGTTGTATAC...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AACATACACACACACACACACCCCAGAAAAGGCTTTGTCCATATTCATGACAAAAAGCCAATCTGGTATTaGAATGATCCACTCGTTTTG +
Preference number: 5 (lower is better)
Translates to: NIHTHTHPRKGFVHIHDKKPIWY*NDPLVL
Trigger: CAAAACGAGTGGATCATTCAAATACCAGATTGGCTT...TTTGTCATGAATATGGACAAAGCCTTTTCTGGGGTGTGTGTGTGTGTGTATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACATGTTTCTCAGGGCTaGCTTTGCATTTTGGATGCT +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLHVSQG*LCILDA
Trigger: AGCATCCAAAATGCAAAGCAAGCCCTGAGAAACATG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATGATTGTTGGCAGTTGTaGCATTGTTACCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYDCWQL*HCYQCR
Trigger: CCTGCACTGGTAACAATGCAACAACTGCCAACAATC...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCTGGAGTGTGAATTGTaGGCAGGACTTAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYLECEL*AGLKVL
Trigger: CAACACCTTAAGTCCTGCCAACAATTCACACTCCAG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp AATAACACTCAGACACACACACACTCACAGACACACGTAAGTACATATGTCCTTTCTTTTTCCAATGCCTaGGAATTGAGAGGGAAAAAG +
Preference number: 5 (lower is better)
Translates to: NNTQTHTHSQTHVSTYVLSFSNA*ELRGKK
Trigger: CTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGA...AAGGACATATGTACTTACGTGTGTCTGTGAGTGTGTGTGTGTCTGAGTGTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS GCA 90 bp CACTCATCTCCATCAAGTTATCTTCTGTTAATACTTCTAGTGTGGTaGTTAATACCTCTTGAATTTGTCCAAGAGCCACACCTTGTAATC +
Preference number: 5 (lower is better)
Translates to: HSSPSSYLLLILLVW*LIPLEFVQEPHLVI
Trigger: GATTACAAGGTGTGGCTCTTGGACAAATTCAAGAGGTATTAAGCACCACACTAGAAGTATTAACAGAAGATAACTTGATGGAGATGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CCA 90 bp TTCTTACCTTGTTCTTCACTTCCTTCCTTACAAAGACTAGAACTTTaGCCCAGACTTAAACTGATATCATCAGAAGTCTTAGCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: FLPCSSLPSLQRLEL*PRLKLISSEVLAVS
Trigger: AGACACTGCTAAGACTTCTGATGATATCAGTTTAAGTCTGGGCCAAAGTTCTAGTCTTTGTAAGGAAGGAAGTGAAGAACAAGGTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553508.5
CDS CCA 90 bp AAGCACTCATCTCCATCAAGTTATCTTCTGTTAATACTTCTAGTGTaGTGCTTAATACCTCTTGAATTTGTCCAAGAGCCACACCTTGTA +
Preference number: 5 (lower is better)
Translates to: KHSSPSSYLLLILLV*CLIPLEFVQEPHLV
Trigger: TACAAGGTGTGGCTCTTGGACAAATTCAAGAGGTATTAAGCACCACACTAGAAGTATTAACAGAAGATAACTTGATGGAGATGAGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAATAGTGTTTAACCTTTaGGGCAGCTTCTTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLIVFNL*GSFFCW
Trigger: CCAACAGAAGAAGCTGCCCAAAAGGTTAAACACTAT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAACTGGGATCCACAATTaGGACTCTGTAAATCACTTC +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLTGIHN*DSVNHF
Trigger: GAAGTGATTTACAGAGTCCAAATTGTGGATCCCAGT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS CCA 90 bp CAGGGCTTAGATCAATGTCCTGTTGCTCCAACAAATCTGTATCAATaGTCAATAGTCTATTCAATCGAATCACATCATGTGGATAAAATC +
Preference number: 5 (lower is better)
Translates to: QGLDQCPVAPTNLYQ*SIVYSIESHHVDKI
Trigger: GATTTTATCCACATGATGTGATTCGATTGAATAGACTATTGACCATTGATACAGATTTGTTGGAGCAACAGGACATTGATCTAAGCCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439984.7
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATATAGTGTTTAACCTTTaGGGCAGCTTCTTCTGTTGG +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYIVFNL*GSFFCW
Trigger: CCAACAGAAGAAGCTGCCCAAAAGGTTAAACACTAT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTACCATATAATTTGAACTaGGTTGCAGTCAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLPYNLN*VAVRFL
Trigger: CAGAAACCTGACTGCAACCAAGTTCAAATTATATGG...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATAAAGTGACCAGACCATaGCCTATCTCTATAAGGTGT +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYKVTRP*PISIRC
Trigger: ACACCTTATAGAGATAGGCAATGGTCTGGTCACTTT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS-3UTR CAA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCTCCATTCATCTCGAATaGAAGAAATACGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: TRKYICPYLWFILNAGKGSIHLE*KKYGNL
Trigger: GAGATTTCCGTATTTCTTCAATTCGAGATGAATGGA...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp ACACGTAAGTACATATGTCCTTATCTCTGGTTTATACTGAATGCTGGTAAAGGCAGATCTACATCAGAATaGGTAGGAAAAACAGCTTCT +
Preference number: 5 (lower is better)
Translates to: TRKYICPYLWFILNAGKGRSTSE*VGKTAS
Trigger: AGAAGCTGTTTTTCCTACCAATTCTGATGTAGATCT...GCCTTTACCAGCATTCAGTATAAACCAGAGATAAGGACATATGTACTTACGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTAAGTCTTAGAACAGAGTaGTCATATAACCTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLSLRTE*SYNLVV
Trigger: CACCACAAGGTTATATGACAACTCTGTTCTAAGACT...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS TCA 90 bp AACATTAAATATGGCAAACATATGAAAGTACACACACTCCTAATATaGCTTCACACATACCAGATATTGGATGCTCTTCTTGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: NIKYGKHMKVHTLLI*LHTYQILDALLAAG
Trigger: ACCAGCAGCAAGAAGAGCATCCAATATCTGGTATGTGTGAAGTCATATTAGGAGTGTGTGTACTTTCATATGTTTGCCATATTTAATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556846.1
CDS GCA 90 bp ATCCCTCACCCCTGTTTGTTTGTTTGTTTGTTTGTTTTGGCAAGCTaGTCACCTGAGGCTATACAAATTACTATACTATATTTAACTTCA +
Preference number: 5 (lower is better)
Translates to: IPHPCLFVCLFVLAS*SPEAIQITILYLTS
Trigger: TGAAGTTAAATATAGTATAGTAATTTGTATAGCCTCAGGTGAGCAGCTTGCCAAAACAAACAAACAAACAAACAAACAGGGGTGAGGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS CCA 90 bp ATTTCCAAATCCCTCACCCCTGTTTGTTTGTTTGTTTGTTTGTTTTaGCAAGCTGCTCACCTGAGGCTATACAAATTACTATACTATATT +
Preference number: 5 (lower is better)
Translates to: ISKSLTPVCLFVCLF*QAAHLRLYKLLYYI
Trigger: AATATAGTATAGTAATTTGTATAGCCTCAGGTGAGCAGCTTGCCAAAACAAACAAACAAACAAACAAACAGGGGTGAGGGATTTGGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCCATATAATTTGAACTaGGTTGCAGTCAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYPYNLN*VAVRFL
Trigger: CAGAAACCTGACTGCAACCAAGTTCAAATTATATGG...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATAGTAGTTCCCAAAGCTaGTTGAAGAGTATGGACATA +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYSSSQS*LKSMDI
Trigger: TATGTCCATACTCTTCAACAAGCTTTGGGAACTACT...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp GTTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATCCATTCATCTCGAATaGAAGAAATACGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: VPLFFQCLGIEREKEMSLSIHLE*KKYGNL
Trigger: GAGATTTCCGTATTTCTTCAATTCGAGATGAATGGA...TAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTCAGAATCTTCAATATaGCCACCACTGTTACATCCA +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYSESSI*PPLLHP
Trigger: TGGATGTAACAGTGGTGGCAATATTGAAGATTCTGA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS-3UTR CAA 90 bp TTCCTCTCTTTTTCCAATGCCTTGGAATTGAGAGGGAAAAAGAAATGTCTTTATTCTTTTTCCAATGCCTaGGAATTGAGAGGGAAAAAG +
Preference number: 5 (lower is better)
Translates to: FLSFSNALELRGKKKCLYSFSNA*ELRGKK
Trigger: CTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGA...ATAAAGACATTTCTTTTTCCCTCTCAATTCCAAGGCATTGGAAAAAGAGAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS GCA 72 bp GGCCCCAGCTCGGCCTCGGTCGCCGGAGCCTGCAGCTaGCCCGTCTATCCACCTCCGGAGCTCCGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: GPSSASVAGACS*PVYPPPELRVS
Trigger: GCTCACCCGGAGCTCCGGAGGTGGATAGACGGGGCAGCTGCAGGCTCCGGCGACCGAGGCCGAGCTGGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000554292.1
ENST00000554879.5
CDS TCA 72 bp GCAGCTGCCCCGTCTATCCACCTCCGGAGCTCCGGGTaGGCGAGCCGGCGCTTCGGCGGTCGCTGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: AAAPSIHLRSSG*ASRRFGGRWCC
Trigger: GCAGCACCAGCGACCGCCGAAGCGCCGGCTCGCTCACCCGGAGCTCCGGAGGTGGATAGACGGGGCAGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000554292.1
ENST00000554879.5
CDS TCA 72 bp CCGGCTGCTATAGCAGTAGGAAGACTGGCTGGCTACTaGGGCCCGGGCAGGAGACTGTCTGACCAGGCCCGA +
Preference number: 6 (lower is better)
Translates to: PAAIAVGRLAGY*GPGRRLSDQAR
Trigger: TCGGGCCTGGTCAGACAGTCTCCTGCCCGGGCCTCAGTAGCCAGCCAGTCTTCCTACTGCTATAGCAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 72 bp GAAGGCAGGCCGTGCTGCACACAGGCCAGGCCGCTCTaGCCTGAGGGTTCCATTTGGTTCACCATCGACAGT +
Preference number: 6 (lower is better)
Translates to: EGRPCCTQARPL*PEGSIWFTIDS
Trigger: ACTGTCGATGGTGAACCAAATGGAACCCTCAGGTCAGAGCGGCCTGGCCTGTGTGCAGCACGGCCTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 72 bp GGTAGGGTTACTCCCTGCATTGTGCCGGCGCCGTACTaGCTGGCGCCTAAATGTGCTGCGTTCACGGCGAAA +
Preference number: 6 (lower is better)
Translates to: GRVTPCIVPAPY*LAPKCAAFTAK
Trigger: TTTCGCCGTGAACGCAGCACATTTAGGCGCCAGGCAGTACGGCGCCGGCACAATGCAGGGAGTAACCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS CCA 72 bp GGGTTACTCCCTGCATTGTGCCGGCGCCGTACTGCCTaGCGCCTAAATGTGCTGCGTTCACGGCGAAATGAC +
Preference number: 6 (lower is better)
Translates to: GLLPALCRRRTA*RLNVLRSRRND
Trigger: GTCATTTCGCCGTGAACGCAGCACATTTAGGCGCCAGGCAGTACGGCGCCGGCACAATGCAGGGAGTAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS CCA 72 bp CGAGAGTGTGATGTTTGCAGGCTGGGATGCTTTGGCTaGAGCTGCTGGAGGAAGGCAGGCCGTGCTGCACAC +
Preference number: 6 (lower is better)
Translates to: RECDVCRLGCFG*SCWRKAGRAAH
Trigger: GTGTGCAGCACGGCCTGCCTTCCTCCAGCAGCTCCAGCCAAAGCATCCCAGCCTGCAAACATCACACTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 72 bp TGCCTGGCGCCTAAATGTGCTGCGTTCACGGCGAAATaGCACTGCCTCCTCGCTGGCTTGTGCTGCTCCACT +
Preference number: 6 (lower is better)
Translates to: CLAPKCAAFTAK*HCLLAGLCCST
Trigger: AGTGGAGCAGCACAAGCCAGCGAGGAGGCAGTGTCATTTCGCCGTGAACGCAGCACATTTAGGCGCCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS GCA 72 bp AGCAATGTAGGAGGGGTAGGGTTACTCCCTGCATTGTaGCGGCGCCGTACTGCCTGGCGCCTAAATGTGCTG +
Preference number: 6 (lower is better)
Translates to: SNVGGVGLLPAL*RRRTAWRLNVL
Trigger: CAGCACATTTAGGCGCCAGGCAGTACGGCGCCGGCACAATGCAGGGAGTAACCCTACCCCTCCTACATTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS GCA 72 bp TCCGATGAGCAATGTAGGAGGGGTAGGGTTACTCCCTaGATTGTGCCGGCGCCGTACTGCCTGGCGCCTAAA +
Preference number: 6 (lower is better)
Translates to: SDEQCRRGRVTP*IVPAPYCLAPK
Trigger: TTTAGGCGCCAGGCAGTACGGCGCCGGCACAATGCAGGGAGTAACCCTACCCCTCCTACATTGCTCATCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS CAA 72 bp TCCATGACATGCCGCAGAGCAAGCAAGGAGGGAGAGTaGGCAAGTACTGCACTCCGCCATGCAGGGTCCCCT +
Preference number: 6 (lower is better)
Translates to: SMTCRRASKEGE*ASTALRHAGSP
Trigger: AGGGGACCCTGCATGGCGGAGTGCAGTACTTGCCAACTCTCCCTCCTTGCTTGCTCTGCGGCATGTCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
ENST00000557428.1
CDS CAA 90 bp GGTGATCCGATGAGCAATGTAGGAGGGGTAGGGTTACTCCCTGCATaGTGCCGGCGCCGTACTGCCTGGCGCCTAAATGTGCTGCGTTCA +
Preference number: 6 (lower is better)
Translates to: GDPMSNVGGVGLLPA*CRRRTAWRLNVLRS
Trigger: TGAACGCAGCACATTTAGGCGCCAGGCAGTACGGCGCCGGCACAATGCAGGGAGTAACCCTACCCCTCCTACATTGCTCATCGGATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS CAA 90 bp GTGCCATCATCCATGACATGCCGCAGAGCAAGCAAGGAGGGAGAGTaGGCAAGTACTGCACTCCGCCATGCAGGGTCCCCTTCATGGGCT +
Preference number: 6 (lower is better)
Translates to: VPSSMTCRRASKEGE*ASTALRHAGSPSWA
Trigger: AGCCCATGAAGGGGACCCTGCATGGCGGAGTGCAGTACTTGCCAACTCTCCCTCCTTGCTTGCTCTGCGGCATGTCATGGATGATGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
ENST00000557428.1
CDS TCA 72 bp AAGGTGTTGCCTGGCTGTGCATCAGTGGCACTGCTCTaGCCTCCCTCTGTCGCAAGAAAGCCCACGAGAGTG +
Preference number: 6 (lower is better)
Translates to: KVLPGCASVALL*PPSVARKPTRV
Trigger: CACTCTCGTGGGCTTTCTTGCGACAGAGGGAGGTCAGAGCAGTGCCACTGATGCACAGCCAGGCAACACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 72 bp TCTTCAGATGCAGAGGTGCTGAGACCTCTCTGGTTGTaGATCTCATCAGAGGGGGTGGGGTCCTTGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SSDAEVLRPLWL*ISSEGVGSLAS
Trigger: CGAGGCCAAGGACCCCACCCCCTCTGATGAGATGCACAACCAGAGAGGTCTCAGCACCTCTGCATCTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS GCA 72 bp ACCCAGTGGTGGACATCCGGAGGGATGAATGCCGGCTaGTATAGCAGTAGGAAGACTGGCTGGCTACTGAGG +
Preference number: 6 (lower is better)
Translates to: TQWWTSGGMNAG*YSSRKTGWLLR
Trigger: CCTCAGTAGCCAGCCAGTCTTCCTACTGCTATAGCAGCCGGCATTCATCCCTCCGGATGTCCACCACTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 72 bp CCTCTGTCGCAAGAAAGCCCACGAGAGTGTGATGTTTaGAGGCTGGGATGCTTTGGCTGGAGCTGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: PLSQESPRECDV*RLGCFGWSCWR
Trigger: CCTCCAGCAGCTCCAGCCAAAGCATCCCAGCCTGCAAACATCACACTCTCGTGGGCTTTCTTGCGACAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 72 bp ATGAGCAATGTAGGAGGGGTAGGGTTACTCCCTGCATaGTGCCGGCGCCGTACTGCCTGGCGCCTAAATGTG +
Preference number: 6 (lower is better)
Translates to: MSNVGGVGLLPA*CRRRTAWRLNV
Trigger: CACATTTAGGCGCCAGGCAGTACGGCGCCGGCACAATGCAGGGAGTAACCCTACCCCTCCTACATTGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS TCA 72 bp AGTGTCCCGGTCCGTTCCACTGCAGTAGCTTTCTGTTaGCCCACTACTCCGTGTGCTCAGGCTCCTCAAGCT +
Preference number: 6 (lower is better)
Translates to: SVPVRSTAVAFC*PTTPCAQAPQA
Trigger: AGCTTGAGGAGCCTGAGCACACGGAGTAGTGGGTCAACAGAAAGCTACTGCAGTGGAACGGACCGGGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS GCA 72 bp GATGTGACAGGTGGGTGGAGTCCAGTTCCTGATCCCTaGCCAGGATTTCCAATGCTTCCCTGGGTCACGTTG +
Preference number: 6 (lower is better)
Translates to: DVTGGWSPVPDP*PGFPMLPWVTL
Trigger: CAACGTGACCCAGGGAAGCATTGGAAATCCTGGGCAGGGATCAGGAACTGGACTCCACCCACCTGTCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 72 bp GACTTAAGGTGTTGCCTGGCTGTGCATCAGTGGCACTaGTCTGACCTCCCTCTGTCGCAAGAAAGCCCACGA +
Preference number: 6 (lower is better)
Translates to: DLRCCLAVHQWH*SDLPLSQESPR
Trigger: TCGTGGGCTTTCTTGCGACAGAGGGAGGTCAGAGCAGTGCCACTGATGCACAGCCAGGCAACACCTTAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 72 bp TGGCAGGACTTAAGGTGTTGCCTGGCTGTGCATCAGTaGCACTGCTCTGACCTCCCTCTGTCGCAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: WQDLRCCLAVHQ*HCSDLPLSQES
Trigger: GCTTTCTTGCGACAGAGGGAGGTCAGAGCAGTGCCACTGATGCACAGCCAGGCAACACCTTAAGTCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 72 bp TCTGGACCAGAAGCACTGCCTTGTCGATGTGGGATCTaGTACCTGGATCTCTGCTGCAAGGCACCCATCGGT +
Preference number: 6 (lower is better)
Translates to: SGPEALPCRCGI*YLDLCCKAPIG
Trigger: ACCGATGGGTGCCTTGCAGCAGAGATCCAGGTACCAGATCCCACATCGACAAGGCAGTGCTTCTGGTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 72 bp CTGGAGGCAAGCAGACCACCTCCATGCCTTCAGTGTTaGACTCATGAGGTTCTGGGTGGCCACAGGCATTGT +
Preference number: 6 (lower is better)
Translates to: LEASRPPPCLQC*THEVLGGHRHC
Trigger: ACAATGCCTGTGGCCACCCAGAACCTCATGAGTTCAACACTGAAGGCATGGAGGTGGTCTGCTTGCCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS GCA 72 bp TCCTCGCTGGCTTGTGCTGCTCCACTGACTGCATCTTaGTCTTCCCCTTCAGGAAATGCAACCTGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: SSLACAAPLTAS*SSPSGNATWFG
Trigger: GCCAAACCAGGTTGCATTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGGAGCAGCACAAGCCAGCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS GCA 72 bp CAAGGAGGGAGAGTTGGCAAGTACTGCACTCCGCCATaGAGGGTCCCCTTCATGGGCTATTACGAGGTTCTT +
Preference number: 6 (lower is better)
Translates to: QGGRVGKYCTPP*RVPFMGYYEVL
Trigger: AAGAACCTCGTAATAGCCCATGAAGGGGACCCTGCATGGCGGAGTGCAGTACTTGCCAACTCTCCCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
ENST00000557428.1
CDS GCA 72 bp CCTTGTCGATGTGGGATCTGGTACCTGGATCTCTGCTaGAAGGCACCCATCGGTGAATCACATGGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: PCRCGIWYLDLC*KAPIGESHGLP
Trigger: TGGAAGGCCATGTGATTCACCGATGGGTGCCTTGCAGCAGAGATCCAGGTACCAGATCCCACATCGACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 72 bp TTGGCTTCTTCAGATGCAGAGGTGCTGAGACCTCTCTaGTTGTGCATCTCATCAGAGGGGGTGGGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LASSDAEVLRPL*LCISSEGVGSL
Trigger: CAAGGACCCCACCCCCTCTGATGAGATGCACAACCAGAGAGGTCTCAGCACCTCTGCATCTGAAGAAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CAA 72 bp GTGCCACTGTCCAGGCTCAACACTCGGGCACGAGTCTaGGCACTATTTGTGCTAGAAGTCCGTCGTGTTGCA +
Preference number: 6 (lower is better)
Translates to: VPLSRLNTRARV*ALFVLEVRRVA
Trigger: TGCAACACGACGGACTTCTAGCACAAATAGTGCCAAGACTCGTGCCCGAGTGTTGAGCCTGGACAGTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CAA 72 bp CTCCTCGCTGGCTTGTGCTGCTCCACTGACTGCATCTaGCTCTTCCCCTTCAGGAAATGCAACCTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: LLAGLCCSTDCI*LFPFRKCNLVW
Trigger: CCAAACCAGGTTGCATTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGGAGCAGCACAAGCCAGCGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000554879.5
CDS CAA 72 bp CCTGGGTCACGTTGCTGTGGGGATTGTTGGCAGTTGTaGCATTGTTACCAGTGCAGGAAGTCCCACCTCCAG +
Preference number: 6 (lower is better)
Translates to: PGSRCCGDCWQL*HCYQCRKSHLQ
Trigger: CTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 72 bp TGGAACTGCAACCAACTGGGGGTGTGGCCTCTCGGATaGACTCAGACATTTCAATCCCTCCACCAGGATCAC +
Preference number: 6 (lower is better)
Translates to: WNCNQLGVWPLG*TQTFQSLHQDH
Trigger: GTGATCCTGGTGGAGGGATTGAAATGTCTGAGTTCATCCGAGAGGCCACACCCCCAGTTGGTTGCAGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553508.5
ENST00000554879.5
CDS CAA 72 bp TTCCCTGGGTCACGTTGCTGTGGGGATTGTTGGCAGTaGTTGCATTGTTACCAGTGCAGGAAGTCCCACCTC +
Preference number: 6 (lower is better)
Translates to: FPGSRCCGDCWQ*LHCYQCRKSHL
Trigger: GAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 72 bp TTCCTCTACACCTTCAGTAATGGCCTCCACTTCCCGTaGTTGACAGTAGGTACCTGGGAGGCGGAGGTTGCA +
Preference number: 6 (lower is better)
Translates to: FLYTFSNGLHFP*LTVGTWEAEVA
Trigger: TGCAACCTCCGCCTCCCAGGTACCTACTGTCAACAACGGGAAGTGGAGGCCATTACTGAAGGTGTAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556849.2
CDS CAA 90 bp CATGCTACTGTGCCACTGTCCAGGCTCAACACTCGGGCACGAGTCTaGGCACTATTTGTGCTAGAAGTCCGTCGTGTTGCACGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: HATVPLSRLNTRARV*ALFVLEVRRVARFL
Trigger: CAAAAAGCGTGCAACACGACGGACTTCTAGCACAAATAGTGCCAAGACTCGTGCCCGAGTGTTGAGCCTGGACAGTGGCACAGTAGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CAA 90 bp CCAGGATTTCCAATGCTTCCCTGGGTCACGTTGCTGTGGGGATTGTaGGCAGTTGTTGCATTGTTACCAGTGCAGGAAGTCCCACCTCCA +
Preference number: 6 (lower is better)
Translates to: PGFPMLPWVTLLWGL*AVVALLPVQEVPPP
Trigger: TGGAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAATCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 90 bp TGCCCAGGATTTCCAATGCTTCCCTGGGTCACGTTGCTGTGGGGATaGTTGGCAGTTGTTGCATTGTTACCAGTGCAGGAAGTCCCACCT +
Preference number: 6 (lower is better)
Translates to: CPGFPMLPWVTLLWG*LAVVALLPVQEVPP
Trigger: AGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAATCCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 90 bp GTTCCTGATCCCTGCCCAGGATTTCCAATGCTTCCCTGGGTCACGTaGCTGTGGGGATTGTTGGCAGTTGTTGCATTGTTACCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: VPDPCPGFPMLPWVT*LWGLLAVVALLPVQ
Trigger: CTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAATCCTGGGCAGGGATCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 72 bp CTCTCTGGGTTACGGTTACGTAGAAAAACAAGCTCCTaGTGTTGCCCTGCCCAAAGACCTCGGACACATTCC +
Preference number: 6 (lower is better)
Translates to: LSGLRLRRKTSS*CCPAQRPRTHS
Trigger: GGAATGTGTCCGAGGTCTTTGGGCAGGGCAACAGCAGGAGCTTGTTTTTCTACGTAACCGTAACCCAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 72 bp CCTGCCCAGGATTTCCAATGCTTCCCTGGGTCACGTTaGTGTGGGGATTGTTGGCAGTTGTTGCATTGTTAC +
Preference number: 6 (lower is better)
Translates to: PAQDFQCFPGSR*CGDCWQLLHCY
Trigger: GTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAATCCTGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 72 bp TCTGGTTGCTTGGATCTAGACCGGCATAAGAATTTCTaGAACTGCAACCAACTGGGGGTGTGGCCTCTCGGA +
Preference number: 6 (lower is better)
Translates to: SGCLDLDRHKNF*NCNQLGVWPLG
Trigger: TCCGAGAGGCCACACCCCCAGTTGGTTGCAGTTCCAGAAATTCTTATGCCGGTCTAGATCCAAGCAACCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553508.5
ENST00000554879.5
CDS CCA 72 bp CGTCTCCTGCCTGACTTGTGGGCAGAAGCTGTCCGATaGATTACGCTAGAAGATTTAGGTCGAACATCCCCT +
Preference number: 6 (lower is better)
Translates to: RLLPDLWAEAVR*ITLEDLGRTSP
Trigger: AGGGGATGTTCGACCTAAATCTTCTAGCGTAATCCATCGGACAGCTTCTGCCCACAAGTCAGGCAGGAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CCA 72 bp CAATGCTTCCCTGGGTCACGTTGCTGTGGGGATTGTTaGCAGTTGTTGCATTGTTACCAGTGCAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: QCFPGSRCCGDC*QLLHCYQCRKS
Trigger: GGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 72 bp CCAATGCTTCCCTGGGTCACGTTGCTGTGGGGATTGTaGGCAGTTGTTGCATTGTTACCAGTGCAGGAAGTC +
Preference number: 6 (lower is better)
Translates to: PMLPWVTLLWGL*AVVALLPVQEV
Trigger: GACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 90 bp TTCCAATGCTTCCCTGGGTCACGTTGCTGTGGGGATTGTTGGCAGTaGTTGCATTGTTACCAGTGCAGGAAGTCCCACCTCCAGTATCAG +
Preference number: 6 (lower is better)
Translates to: FQCFPGSRCCGDCWQ*LHCYQCRKSHLQYQ
Trigger: CTGATACTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 90 bp CTTCCCTGGGTCACGTTGCTGTGGGGATTGTTGGCAGTTGTTGCATaGTTACCAGTGCAGGAAGTCCCACCTCCAGTATCAGAATCTTCA +
Preference number: 6 (lower is better)
Translates to: LPWVTLLWGLLAVVA*LPVQEVPPPVSESS
Trigger: TGAAGATTCTGATACTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 90 bp CAATGCTTCCCTGGGTCACGTTGCTGTGGGGATTGTTGGCAGTTGTaGCATTGTTACCAGTGCAGGAAGTCCCACCTCCAGTATCAGAAT +
Preference number: 6 (lower is better)
Translates to: QCFPGSRCCGDCWQL*HCYQCRKSHLQYQN
Trigger: ATTCTGATACTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 72 bp GGGGATTTTTATTGGCTTCTTCAGATGCAGAGGTGCTaGGACCTCTCTGGTTGTGCATCTCATCAGAGGGGG +
Preference number: 6 (lower is better)
Translates to: GDFYWLLQMQRC*DLSGCASHQRG
Trigger: CCCCCTCTGATGAGATGCACAACCAGAGAGGTCTCAGCACCTCTGCATCTGAAGAAGCCAATAAAAATCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS TCA 72 bp AAGCAGACCACCTCCATGCCTTCAGTGTTGAACTCATaGGGTTCTGGGTGGCCACAGGCATTGTCCAATATC +
Preference number: 6 (lower is better)
Translates to: KQTTSMPSVLNS*GSGWPQALSNI
Trigger: GATATTGGACAATGCCTGTGGCCACCCAGAACCTCATGAGTTCAACACTGAAGGCATGGAGGTGGTCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS TCA 72 bp CACTATCTCAAGAACAGCATGGGGGAACCACCCCCATaGTTCAGTTATCTCCACGTGGTCCATGTAGAGGGT +
Preference number: 6 (lower is better)
Translates to: HYLKNSMGEPPP*FSYLHVVHVEG
Trigger: ACCCTCTACATGGACCACGTGGAGATAACTGAATCATGGGGGTGGTTCCCCCATGCTGTTCTTGAGATAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554292.1
CDS CCA 72 bp CCAGGATTTCCAATGCTTCCCTGGGTCACGTTGCTGTaGGGATTGTTGGCAGTTGTTGCATTGTTACCAGTG +
Preference number: 6 (lower is better)
Translates to: PGFPMLPWVTLL*GLLAVVALLPV
Trigger: CACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAATCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 72 bp GTCACGTTGCTGTGGGGATTGTTGGCAGTTGTTGCATaGTTACCAGTGCAGGAAGTCCCACCTCCAGTATCA +
Preference number: 6 (lower is better)
Translates to: VTLLWGLLAVVA*LPVQEVPPPVS
Trigger: TGATACTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 90 bp CTGTTGGTACTCGCTTCCATAGCAATCTTTTCACTGCTAGTCCTTTaGTCACTGGCACAGCTATTCTTCTCCTCTGGGCCTGCACAGCAC +
Preference number: 6 (lower is better)
Translates to: LLVLASIAIFSLLVL*SLAQLFFSSGPAQH
Trigger: GTGCTGTGCAGGCCCAGAGGAGAAGAATAGCTGTGCCAGTGACAAAAGGACTAGCAGTGAAAAGATTGCTATGGAAGCGAGTACCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CAA 90 bp TCGCTCCCACATAGGATCAAAGTGATACCTGCAGGCATCTTCTGCTaGTTCCTCTCTTTTTCCAATGCCTGGATCTCTGCTGCAAGGCAC +
Preference number: 6 (lower is better)
Translates to: SLPHRIKVIPAGIFC*FLSFSNAWISAARH
Trigger: GTGCCTTGCAGCAGAGATCCAGGCATTGGAAAAAGAGAGGAACAAGCAGAAGATGCCTGCAGGTATCACTTTGATCCTATGTGGGAGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555780.1
CDS GCA 72 bp CCATTAACCTGTTTGAGTCATTCAAACATGCTACTGTaGCACTGTCCAGGCTCAACACTCGGGCACGAGTCT +
Preference number: 6 (lower is better)
Translates to: PLTCLSHSNMLL*HCPGSTLGHES
Trigger: AGACTCGTGCCCGAGTGTTGAGCCTGGACAGTGGCACAGTAGCATGTTTGAATGACTCAAACAGGTTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
ENST00000556846.1
CDS CAA 72 bp TTCCTCTACACCTTCAGTAATGGCCTCCACTTCCCGTaGTTGACAGTAGGTACCTCTGAATTCAAGTCCCCG +
Preference number: 6 (lower is better)
Translates to: FLYTFSNGLHFP*LTVGTSEFKSP
Trigger: CGGGGACTTGAATTCAGAGGTACCTACTGTCAACAACGGGAAGTGGAGGCCATTACTGAAGGTGTAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS CAA 72 bp TTTCCAATGCTTCCCTGGGTCACGTTGCTGTGGGGATaGTTGGCAGTTGTTGCATTGTTACCAGTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: FPMLPWVTLLWG*LAVVALLPVQE
Trigger: TTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACAGCAACGTGACCCAGGGAAGCATTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 72 bp CAGCGTAGAAGAGAACTTACCTCCACTGACTGCATCTaGCTCTTCCCCTTCAGGAAATGCAACCTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: QRRRELTSTDCI*LFPFRKCNLVW
Trigger: CCAAACCAGGTTGCATTTCCTGAAGGGGAAGAGCAAGATGCAGTCAGTGGAGGTAAGTTCTCTTCTACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439984.7
ENST00000556846.1
CDS CAA 90 bp TTACCAGTGCAGGAAGTCCCACCTCCAGTATCAGAATCTTCAATATaGCCACCACTGTTACATCCAGCTCCGCAACCTTTCCTAAGCCTG +
Preference number: 6 (lower is better)
Translates to: LPVQEVPPPVSESSI*PPLLHPAPQPFLSL
Trigger: CAGGCTTAGGAAAGGTTGCGGAGCTGGATGTAACAGTGGTGGCAATATTGAAGATTCTGATACTGGAGGTGGGACTTCCTGCACTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 72 bp GATTGGATGGATGATGGCAAGTTTCGAAGCGATATCTaGCTAGTAGAAGAGCGCCGACAAGGCACAAACCCA +
Preference number: 6 (lower is better)
Translates to: DWMDDGKFRSDI*LVEERRQGTNP
Trigger: TGGGTTTGTGCCTTGTCGGCGCTCTTCTACTAGTCAGATATCGCTTCGAAACTTGCCATCATCCATCCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS GCA 72 bp AGGAAGTCCCACCTCCAGTATCAGAATCTTCAATATTaGCACCACTGTTACATCCAGCTCCGCAACCTTTCC +
Preference number: 6 (lower is better)
Translates to: RKSHLQYQNLQY*HHCYIQLRNLS
Trigger: GGAAAGGTTGCGGAGCTGGATGTAACAGTGGTGGCAATATTGAAGATTCTGATACTGGAGGTGGGACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 72 bp CAGAGACTGATCAACATGGTGGTGGTGGTTATGACTTaGCAGGTTCACTTTGTCACTGAAGTCCCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: QRLINMVVVVMT*QVHFVTEVPWQ
Trigger: TTGCCAAGGGACTTCAGTGACAAAGTGAACCTGCCAAGTCATAACCACCACCACCATGTTGATCAGTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553272.6
ENST00000553428.2
ENST00000554879.5
CDS CCA 72 bp AAGGTACAAGAGAAGCTACTTCTGTGTCACAGGCGCTaGACAGAGACTGATCAACATGGTGGTGGTGGTTAT +
Preference number: 6 (lower is better)
Translates to: KVQEKLLLCHRR*TETDQHGGGGY
Trigger: ATAACCACCACCACCATGTTGATCAGTCTCTGTCCAGCGCCTGTGACACAGAAGTAGCTTCTCTTGTACCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553272.6
ENST00000553428.2
ENST00000554879.5
CDS CCA 72 bp ACTGCATCTTGCTCTTCCCCTTCAGGAAATGCAACCTaGTTTGGCAAGCTATTCCTAGATCGAGTGACTGTC +
Preference number: 6 (lower is better)
Translates to: TASCSSPSGNAT*FGKLFLDRVTV
Trigger: GACAGTCACTCGATCTAGGAATAGCTTGCCAAACCAGGTTGCATTTCCTGAAGGGGAAGAGCAAGATGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
ENST00000556846.1
CDS CCA 72 bp GCAAGGTACTTCCTGACTTCAGGGACAAAGCATTGGTaGAACCAAACCAGGAAGAGTTCTCTTTGTCTAGGC +
Preference number: 6 (lower is better)
Translates to: ARYFLTSGTKHW*NQTRKSSLCLG
Trigger: GCCTAGACAAAGAGAACTCTTCCTGGTTTGGTTCCACCAATGCTTTGTCCCTGAAGTCAGGAAGTACCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CAA 72 bp CAGGATCACTCGGTCCATTGCTGTCTTTTCTCCTGGTaGAACAGTTGCCTTGTTCAGCTTTGGTTCGCTGAT +
Preference number: 6 (lower is better)
Translates to: QDHSVHCCLFSW*NSCLVQLWFAD
Trigger: ATCAGCGAACCAAAGCTGAACAAGGCAACTGTTCAACCAGGAGAAAAGACAGCAATGGACCGAGTGATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553508.5
ENST00000554879.5
CDS CAA 72 bp CTCGCTTCCATAGCAATCTTTTCACTGCTAGTCCTTTaGTCACTGGCACAGCTATTCTTCTCCTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: LASIAIFSLLVL*SLAQLFFSSGP
Trigger: AGGCCCAGAGGAGAAGAATAGCTGTGCCAGTGACAAAAGGACTAGCAGTGAAAAGATTGCTATGGAAGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CAA 72 bp CAGGAAGTCCCACCTCCAGTATCAGAATCTTCAATATaGCCACCACTGTTACATCCAGCTCCGCAACCTTTC +
Preference number: 6 (lower is better)
Translates to: QEVPPPVSESSI*PPLLHPAPQPF
Trigger: GAAAGGTTGCGGAGCTGGATGTAACAGTGGTGGCAATATTGAAGATTCTGATACTGGAGGTGGGACTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 90 bp TTACCAAGTTCATCGTGCAAACTGCTACCGCCTACAGCAGATGCATaGTCATGTGATGCTTCTAAGTGGACACTCCCATTTCTCACCAGC +
Preference number: 6 (lower is better)
Translates to: LPSSSCKLLPPTADA*SCDASKWTLPFLTS
Trigger: GCTGGTGAGAAATGGGAGTGTCCACTTAGAAGCATCACATGACAATGCATCTGCTGTAGGCGGTAGCAGTTTGCACGATGAACTTGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS CAA 90 bp ATTACAGTCACATATTTATCATCAATCTGGACCAGAAGCACTGCCTaGTCGATGTGGGATCTGGTACCTGGATCTCTGCTGCAAGGCACC +
Preference number: 6 (lower is better)
Translates to: ITVTYLSSIWTRSTA*SMWDLVPGSLLQGT
Trigger: GGTGCCTTGCAGCAGAGATCCAGGTACCAGATCCCACATCGACAAGGCAGTGCTTCTGGTCCAGATTGATGATAAATATGTGACTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 72 bp GCTATCACTGCTGAACTGGTGAGCAGACTGAACACTTaGTGCTCTACTCAAGTCACTCTGATCACTAGAGTC +
Preference number: 6 (lower is better)
Translates to: AITAELVSRLNT*CSTQVTLITRV
Trigger: GACTCTAGTGATCAGAGTGACTTGAGTAGAGCATCAAGTGTTCAGTCTGCTCACCAGTTCAGCAGTGATAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS TCA 72 bp GTGAGTCGAGATTGTGTCATTGCACTCCAGCCTGGATaGCAAGGGCAAAACTTTATAGTCTCTCTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: VSRDCVIALQPG*QGQNFIVSLPE
Trigger: TTCTGGGAGAGAGACTATAAAGTTTTGCCCTTGTCATCCAGGCTGGAGTGCAATGACACAATCTCGACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556849.2
CDS GCA 72 bp CTTTATGAGTGTGTTTGGTCTTTAGAGCACTGTATCTaGCCTCAGGAGACTGACAGGAATGAGAAGTGGTGC +
Preference number: 6 (lower is better)
Translates to: LYECVWSLEHCI*PQETDRNEKWC
Trigger: GCACCACTTCTCATTCCTGTCAGTCTCCTGAGGGCAGATACAGTGCTCTAAAGACCAAACACACTCATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS GCA 72 bp AGTCTTGGCACTATTTGTGCTAGAAGTCCGTCGTGTTaGACGCTTTTTGCTGGTTCCTTCAGGAACCAAATG +
Preference number: 6 (lower is better)
Translates to: SLGTICARSPSC*TLFAGSFRNQM
Trigger: CATTTGGTTCCTGAAGGAACCAGCAAAAAGCGTGCAACACGACGGACTTCTAGCACAAATAGTGCCAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS GCA 72 bp TGTGGGGATTGTTGGCAGTTGTTGCATTGTTACCAGTaGAGGAAGTCCCACCTCCAGTATCAGAATCTTCAA +
Preference number: 6 (lower is better)
Translates to: CGDCWQLLHCYQ*RKSHLQYQNLQ
Trigger: TTGAAGATTCTGATACTGGAGGTGGGACTTCCTGCACTGGTAACAATGCAACAACTGCCAACAATCCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 72 bp GGCAAGCTATTCCTAGATCGAGTGACTGTCTCTAACTaGGAAGCCCGTCCTAATAAAGATAGCTCATCTAGC +
Preference number: 6 (lower is better)
Translates to: GKLFLDRVTVSN*EARPNKDSSSS
Trigger: GCTAGATGAGCTATCTTTATTAGGACGGGCTTCCCAGTTAGAGACAGTCACTCGATCTAGGAATAGCTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
ENST00000556846.1
CDS CCA 72 bp TGTAAATCACTTCTGCCTTTCTGGAGTGTGAATTGTTaGCAGGACTTAAGGTGTTGCCTGGCTGTGCATCAG +
Preference number: 6 (lower is better)
Translates to: CKSLLPFWSVNC*QDLRCCLAVHQ
Trigger: CTGATGCACAGCCAGGCAACACCTTAAGTCCTGCCAACAATTCACACTCCAGAAAGGCAGAAGTGATTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 72 bp CTGGCAAGGTACTTCCTGACTTCAGGGACAAAGCATTaGTGGAACCAAACCAGGAAGAGTTCTCTTTGTCTA +
Preference number: 6 (lower is better)
Translates to: LARYFLTSGTKH*WNQTRKSSLCL
Trigger: TAGACAAAGAGAACTCTTCCTGGTTTGGTTCCACCAATGCTTTGTCCCTGAAGTCAGGAAGTACCTTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CAA 72 bp TCATCGTGCAAACTGCTACCGCCTACAGCAGATGCATaGTCATGTGATGCTTCTAAGTGGACACTCCCATTT +
Preference number: 6 (lower is better)
Translates to: SSCKLLPPTADA*SCDASKWTLPF
Trigger: AAATGGGAGTGTCCACTTAGAAGCATCACATGACAATGCATCTGCTGTAGGCGGTAGCAGTTTGCACGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS CAA 72 bp ACATATTTATCATCAATCTGGACCAGAAGCACTGCCTaGTCGATGTGGGATCTGGTACCTGGATCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: TYLSSIWTRSTA*SMWDLVPGSLL
Trigger: CAGCAGAGATCCAGGTACCAGATCCCACATCGACAAGGCAGTGCTTCTGGTCCAGATTGATGATAAATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 72 bp TTCCTCTACACCTTCAGTAATGGCCTCCACTTCCCGTaGTTGACAGTAGGTACCTGGATTTCTATCAAGCTG +
Preference number: 6 (lower is better)
Translates to: FLYTFSNGLHFP*LTVGTWISIKL
Trigger: CAGCTTGATAGAAATCCAGGTACCTACTGTCAACAACGGGAAGTGGAGGCCATTACTGAAGGTGTAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554691.5
CDS CAA 72 bp ACTGGCAAGGTACTTCCTGACTTCAGGGACAAAGCATaGGTGGAACCAAACCAGGAAGAGTTCTCTTTGTCT +
Preference number: 6 (lower is better)
Translates to: TGKVLPDFRDKA*VEPNQEEFSLS
Trigger: AGACAAAGAGAACTCTTCCTGGTTTGGTTCCACCAATGCTTTGTCCCTGAAGTCAGGAAGTACCTTGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CAA 72 bp CTGTGTAAAGTCAACTTGTTTTCTGGCACTGCTTCCTaGTCTTCCTCATCATGTGGCGCTGGTTTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: LCKVNLFSGTAS*SSSSCGAGLEA
Trigger: TGCTTCCAAACCAGCGCCACATGATGAGGAAGACAAGGAAGCAGTGCCAGAAAACAAGTTGACTTTACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CAA 90 bp GTCTTGAATAATCCCAATCACTCTGCCAGACTGTGTAAAGTCAACTaGTTTTCTGGCACTGCTTCCTTGTCTTCCTCATCATGTGGCGCT +
Preference number: 6 (lower is better)
Translates to: VLNNPNHSARLCKVN*FSGTASLSSSSCGA
Trigger: AGCGCCACATGATGAGGAAGACAAGGAAGCAGTGCCAGAAAACAAGTTGACTTTACACAGTCTGGCAGAGTGATTGGGATTATTCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS TCA 72 bp CTGGTTGAACAGTTGCCTTGTTCAGCTTTGGTTCGCTaGTCCGTGAACTCATTTGCAGTCCTATCTACAACT +
Preference number: 6 (lower is better)
Translates to: LVEQLPCSALVR*SVNSFAVLSTT
Trigger: AGTTGTAGATAGGACTGCAAATGAGTTCACGGATCAGCGAACCAAAGCTGAACAAGGCAACTGTTCAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000553508.5
ENST00000554879.5
CDS TCA 72 bp TTGTGTGTGTGTTCAGAGTCTGTGCCCCTTTCTTTATaGGTGTGTTTGGTCTTTAGAGCACTGTATCTGCCC +
Preference number: 6 (lower is better)
Translates to: LCVCSESVPLSL*VCLVFRALYLP
Trigger: GGGCAGATACAGTGCTCTAAAGACCAAACACACTCATAAAGAAAGGGGCACAGACTCTGAACACACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS TCA 72 bp GGATGCTCTTCTTGCTGCTGGTTCAAAATTCACAAGTaGCATATCACAGCCACCAGTCTCATACAGCGTAGA +
Preference number: 6 (lower is better)
Translates to: GCSSCCWFKIHK*HITATSLIQRR
Trigger: TCTACGCTGTATGAGACTGGTGGCTGTGATATGTCACTTGTGAATTTTGAACCAGCAGCAAGAAGAGCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
ENST00000556846.1
CDS TCA 72 bp CATTTGGTTCACCATCGACAGTCGGGATTGGATGGATaGTGGCAAGTTTCGAAGCGATATCTGACTAGTAGA +
Preference number: 6 (lower is better)
Translates to: HLVHHRQSGLDG*WQVSKRYLTSR
Trigger: TCTACTAGTCAGATATCGCTTCGAAACTTGCCATCATCCATCCAATCCCGACTGTCGATGGTGAACCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS TCA 72 bp TTCAAGATCACAGCTCTGAATTCAAGTCCCCGCAGCTaGAAAGTGACCAGACCATTGCCTATCTCTATAAGG +
Preference number: 6 (lower is better)
Translates to: FKITALNSSPRS*KVTRPLPISIR
Trigger: CCTTATAGAGATAGGCAATGGTCTGGTCACTTTTCAGCTGCGGGGACTTGAATTCAGAGCTGTGATCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556516.1
CDS GCA 72 bp GAGGTAAATCACACAGAAACTCTCCCTAGATATGCCTaGCAGTCGGTGGTCATAGTCTTCATCAATGTTTGG +
Preference number: 6 (lower is better)
Translates to: EVNHTETLPRYA*QSVVIVFINVW
Trigger: CCAAACATTGATGAAGACTATGACCACCGACTGGCAGGCATATCTAGGGAGAGTTTCTGTGTGATTTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS GCA 72 bp AGTCACATATTTATCATCAATCTGGACCAGAAGCACTaGCTTGTCGATGTGGGATCTGGTACCTGGATCTCT +
Preference number: 6 (lower is better)
Translates to: SHIFIINLDQKH*LVDVGSGTWIS
Trigger: AGAGATCCAGGTACCAGATCCCACATCGACAAGGCAGTGCTTCTGGTCCAGATTGATGATAAATATGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CAA 72 bp ACCTCATTATCAGTGTTAAATCTGAGCCCCACTGCATaGGATCTGATGGCAGCAACTCTCATTTCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: TSLSVLNLSPTA*DLMAATLISSH
Trigger: GTGGGAAGAAATGAGAGTTGCTGCCATCAGATCCAATGCAGTGGGGCTCAGATTTAACACTGATAATGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS CAA 90 bp CCGATGGATTACGCTAGAAGATTTAGGTCGAACATCCCCTTCCTTTaGCTTTCCACCAACATCTTTACGCACTTTGGAATCCACAGAAAC +
Preference number: 6 (lower is better)
Translates to: PMDYARRFRSNIPFL*LSTNIFTHFGIHRN
Trigger: GTTTCTGTGGATTCCAAAGTGCGTAAAGATGTTGGTGGAAAGCAAAAGGAAGGGGATGTTCGACCTAAATCTTCTAGCGTAATCCATCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS GCA 72 bp GGCTACTGCAACAATGCTACAGATAAAACTGTAAAGTaGTGCAAGCAGGCTTGTAGTGGCATTACCACCAAA +
Preference number: 6 (lower is better)
Translates to: GYCNNATDKTVK*CKQACSGITTK
Trigger: TTTGGTGGTAATGCCACTACAAGCCTGCTTGCAGCACTTTACAGTTTTATCTGTAGCATTGTTGCAGTAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS CAA 72 bp AATCCCAATCACTCTGCCAGACTGTGTAAAGTCAACTaGTTTTCTGGCACTGCTTCCTTGTCTTCCTCATCA +
Preference number: 6 (lower is better)
Translates to: NPNHSARLCKVN*FSGTASLSSSS
Trigger: TGATGAGGAAGACAAGGAAGCAGTGCCAGAAAACAAGTTGACTTTACACAGTCTGGCAGAGTGATTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CAA 90 bp TTGAAGTGGTTAAGGGCTTTATACTTTCAGGTGCCATTAACCTGTTaGAGTCATTCAAACATGCTACTGTGCCACTGTCCAGGCTCAACA +
Preference number: 6 (lower is better)
Translates to: LKWLRALYFQVPLTC*SHSNMLLCHCPGST
Trigger: TGTTGAGCCTGGACAGTGGCACAGTAGCATGTTTGAATGACTCAAACAGGTTAATGGCACCTGAAAGTATAAAGCCCTTAACCACTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
ENST00000556846.1
CDS TCA 72 bp TGGGAGAGAGAGCACATCATGTGGATAAAATCGAACTaGGGTAGAACTGGATACATGAGAATCTGTGTCACA +
Preference number: 6 (lower is better)
Translates to: WEREHIMWIKSN*GRTGYMRICVT
Trigger: TGTGACACAGATTCTCATGTATCCAGTTCTACCTCAGTTCGATTTTATCCACATGATGTGCTCTCTCTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS GCA 72 bp GTAGCTGCCAAGTCAGGGCTTAGATCAATGTCCTGTTaGTCCAACAAATCTGTATCAATGGTCAATAGTCTA +
Preference number: 6 (lower is better)
Translates to: VAAKSGLRSMSC*SNKSVSMVNSL
Trigger: TAGACTATTGACCATTGATACAGATTTGTTGGAGCAACAGGACATTGATCTAAGCCCTGACTTGGCAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304743.7
ENST00000439984.7
CDS GCA 72 bp TTGAACCTCATTATCAGTGTTAAATCTGAGCCCCACTaGATTGGATCTGATGGCAGCAACTCTCATTTCTTC +
Preference number: 6 (lower is better)
Translates to: LNLIISVKSEPH*IGSDGSNSHFF
Trigger: GAAGAAATGAGAGTTGCTGCCATCAGATCCAATGCAGTGGGGCTCAGATTTAACACTGATAATGAGGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS CCA 72 bp TGCTTTCAAAGGTTTGCTCTTCCCACTTTTTGTGGGTaGCTGAGAAGTATTGATTTTCAAGTCACCAGCAAG +
Preference number: 6 (lower is better)
Translates to: CFQRFALPTFCG*LRSIDFQVTSK
Trigger: CTTGCTGGTGACTTGAAAATCAATACTTCTCAGCCACCCACAAAAAGTGGGAAGAGCAAACCTTTGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CAA 72 bp TACGCTAGAAGATTTAGGTCGAACATCCCCTTCCTTTaGCTTTCCACCAACATCTTTACGCACTTTGGAATC +
Preference number: 6 (lower is better)
Translates to: YARRFRSNIPFL*LSTNIFTHFGI
Trigger: GATTCCAAAGTGCGTAAAGATGTTGGTGGAAAGCAAAAGGAAGGGGATGTTCGACCTAAATCTTCTAGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CAA 72 bp TCCAAATCCCTCACCCCTGTTTGTTTGTTTGTTTGTTaGTTTTGGCAAGCTGCTCACCTGAGGCTATACAAA +
Preference number: 6 (lower is better)
Translates to: SKSLTPVCLFVC*FWQAAHLRLYK
Trigger: TTTGTATAGCCTCAGGTGAGCAGCTTGCCAAAACAAACAAACAAACAAACAAACAGGGGTGAGGGATTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS CAA 90 bp TTCAGGGACAAAGCATTGGTGGAACCAAACCAGGAAGAGTTCTCTTaGTCTAGGCCTTCTTGTTGTACAATCAAAATAGCAGTTGGTGTT +
Preference number: 6 (lower is better)
Translates to: FRDKALVEPNQEEFS*SRPSCCTIKIAVGV
Trigger: AACACCAACTGCTATTTTGATTGTACAACAAGAAGGCCTAGACAAAGAGAACTCTTCCTGGTTTGGTTCCACCAATGCTTTGTCCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CCA 72 bp ACTAGAGTCTTCGTCATGACAAAATATAGCACTGTGTaGCTTGGTACCAGAAACACCTCGAAAGCAAACATA +
Preference number: 6 (lower is better)
Translates to: TRVFVMTKYSTV*LGTRNTSKANI
Trigger: TATGTTTGCTTTCGAGGTGTTTCTGGTACCAAGCCACACAGTGCTATATTTTGTCATGACGAAGACTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CCA 72 bp TCCCTCACCCCTGTTTGTTTGTTTGTTTGTTTGTTTTaGCAAGCTGCTCACCTGAGGCTATACAAATTACTA +
Preference number: 6 (lower is better)
Translates to: SLTPVCLFVCLF*QAAHLRLYKLL
Trigger: TAGTAATTTGTATAGCCTCAGGTGAGCAGCTTGCCAAAACAAACAAACAAACAAACAAACAGGGGTGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS CAA 72 bp TTAAGGGCTTTATACTTTCAGGTGCCATTAACCTGTTaGAGTCATTCAAACATGCTACTGTGCCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: LRALYFQVPLTC*SHSNMLLCHCP
Trigger: TGGACAGTGGCACAGTAGCATGTTTGAATGACTCAAACAGGTTAATGGCACCTGAAAGTATAAAGCCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
ENST00000556846.1
CDS CAA 72 bp TATTTCCAAATCCCTCACCCCTGTTTGTTTGTTTGTTaGTTTGTTTTGGCAAGCTGCTCACCTGAGGCTATA +
Preference number: 6 (lower is better)
Translates to: YFQIPHPCLFVC*FVLASCSPEAI
Trigger: TATAGCCTCAGGTGAGCAGCTTGCCAAAACAAACAAACAAACAAACAAACAGGGGTGAGGGATTTGGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS CAA 90 bp AAACCAGAATTTTCCACCAAGGATTCTTTGGATCCAGAAAGAGGCTaGGAAGATTCTAACTCACTAACTGGATCTAATCCACGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: KPEFSTKDSLDPERG*EDSNSLTGSNPRLC
Trigger: GCAAAGACGTGGATTAGATCCAGTTAGTGAGTTAGAATCTTCCAAGCCTCTTTCTGGATCCAAAGAATCCTTGGTGGAAAATTCTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554879.5
CDS CAA 90 bp CATCTGATCCTGGATTTCTATCAAGCTGGGAAGCCAATCTGGTATTaGAATGATCCACTCGTTTTGTGTTATAGTCTCTCTCCCAGAATT +
Preference number: 6 (lower is better)
Translates to: HLILDFYQAGKPIWY*NDPLVLCYSLSPRI
Trigger: AATTCTGGGAGAGAGACTATAACACAAAACGAGTGGATCATTCAAATACCAGATTGGCTTCCCAGCTTGATAGAAATCCAGGATCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000556516.1
CDS CAA 90 bp GTCACCACAGTATATGACATCATGGTAAAGTATAACGTTCTTACCTaGTTCTTCACTTCCTTCCTTACAAAGACTAGAACTTTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: VTTVYDIMVKYNVLT*FFTSFLTKTRTLAQ
Trigger: CTGGGCCAAAGTTCTAGTCTTTGTAAGGAAGGAAGTGAAGAACAAGGTAAGAACGTTATACTTTACCATGATGTCATATACTGTGGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553508.5
CDS CAA 90 bp CTCTTATCATTGTTGTTACTATATTTCCAAATCCCTCACCCCTGTTaGTTTGTTTGTTTGTTTGTTTTGGCAAGCTGCTCACCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: LLSLLLLYFQIPHPC*FVCLFVLASCSPEA
Trigger: AGCCTCAGGTGAGCAGCTTGCCAAAACAAACAAACAAACAAACAAACAGGGGTGAGGGATTTGGAAATATAGTAACAACAATGATAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS TCA 72 bp TGGATTTCTATCAAGCTGGGAAGCCAATCTGGTATTTaGATGATCCACTCGTTTTGTGTTATAGTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: WISIKLGSQSGI*MIHSFCVIVSL
Trigger: GAGAGAGACTATAACACAAAACGAGTGGATCATTCAAATACCAGATTGGCTTCCCAGCTTGATAGAAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556516.1
CDS TCA 72 bp GACAAAGATTGGGTAGCCAATAGGTTGATCACAAGATaGGTTTATCATGTTTCTCAGGGCTTGCTTTGCATT +
Preference number: 6 (lower is better)
Translates to: DKDWVANRLITR*VYHVSQGLLCI
Trigger: AATGCAAAGCAAGCCCTGAGAAACATGATAAACTCATCTTGTGATCAACCTATTGGCTACCCAATCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556272.1
CDS CCA 72 bp GATCAATGTCCTGTTGCTCCAACAAATCTGTATCAATaGTCAATAGTCTATTCAATCGAATCTGTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: DQCPVAPTNLYQ*SIVYSIESVGE
Trigger: CTCTCCCACAGATTCGATTGAATAGACTATTGACCATTGATACAGATTTGTTGGAGCAACAGGACATTGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304743.7
CDS CCA 72 bp CTGATCCTGGATTTCTATCAAGCTGGGAAGCCAATCTaGTATTTGAATGATCCACTCGTTTTGTGTTATAGT +
Preference number: 6 (lower is better)
Translates to: LILDFYQAGKPI*YLNDPLVLCYS
Trigger: ACTATAACACAAAACGAGTGGATCATTCAAATACCAGATTGGCTTCCCAGCTTGATAGAAATCCAGGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000556516.1
CDS CCA 72 bp AGGTACCTGGATTTCTATCAAGCTGGGAAGCCAATCTaGTATTTGAATGATCCACTCGTTTTGTGTTATAGT +
Preference number: 6 (lower is better)
Translates to: RYLDFYQAGKPI*YLNDPLVLCYS
Trigger: ACTATAACACAAAACGAGTGGATCATTCAAATACCAGATTGGCTTCCCAGCTTGATAGAAATCCAGGTACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554691.5
CDS CAA 72 bp CTGGATTTCTATCAAGCTGGGAAGCCAATCTGGTATTaGAATGATCCACTCGTTTTGTGTTATAGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: LDFYQAGKPIWY*NDPLVLCYSLS
Trigger: AGAGAGACTATAACACAAAACGAGTGGATCATTCAAATACCAGATTGGCTTCCCAGCTTGATAGAAATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
ENST00000556516.1
CDS CAA 72 bp ATAGTAAGTGGTGAGTACTTTCCGAAGATCAAAGACTaGAAGCATAGAAGCAGCACTGTTATCAGTGATGCT +
Preference number: 6 (lower is better)
Translates to: IVSGEYFPKIKD*KHRSSTVISDA
Trigger: AGCATCACTGATAACAGTGCTGCTTCTATGCTTCAAGTCTTTGATCTTCGGAAAGTACTCACCACTTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS CAA 72 bp AAAGCATTGGTGGAACCAAACCAGGAAGAGTTCTCTTaGTCTAGGCCTTCTTGTTGTACAATCAAAATAGCA +
Preference number: 6 (lower is better)
Translates to: KALVEPNQEEFS*SRPSCCTIKIA
Trigger: TGCTATTTTGATTGTACAACAAGAAGGCCTAGACAAAGAGAACTCTTCCTGGTTTGGTTCCACCAATGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS TCA 72 bp AGAAAAACCTACCACATCATGTGGATAAAATCGAACTaGGGTAGAACTGGATACATGAGAATCTGTGTCACA +
Preference number: 6 (lower is better)
Translates to: RKTYHIMWIKSN*GRTGYMRICVT
Trigger: TGTGACACAGATTCTCATGTATCCAGTTCTACCTCAGTTCGATTTTATCCACATGATGTGGTAGGTTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS TCA 72 bp AAGGGTCCATACTGTAAAAGAAGTCAAAATCAGTCTTaGATAATCCCAATCACTCTGCCAGACTGTGTAAAG +
Preference number: 6 (lower is better)
Translates to: KGPYCKRSQNQS*IIPITLPDCVK
Trigger: CTTTACACAGTCTGGCAGAGTGATTGGGATTATTCAAGACTGATTTTGACTTCTTTTACAGTATGGACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS GCA 72 bp CCATCAAGTTATCTTCTGTTAATACTTCTAGTGTGGTaGTTAATACCTCTTGAATTTGTCCAAGAGCCACAC +
Preference number: 6 (lower is better)
Translates to: PSSYLLLILLVW*LIPLEFVQEPH
Trigger: GTGTGGCTCTTGGACAAATTCAAGAGGTATTAAGCACCACACTAGAAGTATTAACAGAAGATAACTTGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CAA 72 bp TATGACTTCACACATACCAGATATTGGATGCTCTTCTaGCTGCTGGTTCAAAATTCACAAGTGACATATCAC +
Preference number: 6 (lower is better)
Translates to: YDFTHTRYWMLF*LLVQNSQVTYH
Trigger: GTGATATGTCACTTGTGAATTTTGAACCAGCAGCAAGAAGAGCATCCAATATCTGGTATGTGTGAAGTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556846.1
CDS CAA 90 bp TACTATATTTCCAAATCCCTCACCCCTGTTTGTTTGTTTGTTTGTTaGTTTTGGCAAGCTGCTCACCTGAGGCTATACAAATTACTATAC +
Preference number: 6 (lower is better)
Translates to: YYISKSLTPVCLFVC*FWQAAHLRLYKLLY
Trigger: GTATAGTAATTTGTATAGCCTCAGGTGAGCAGCTTGCCAAAACAAACAAACAAACAAACAAACAGGGGTGAGGGATTTGGAAATATAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS CAA 90 bp TTGTTACTATATTTCCAAATCCCTCACCCCTGTTTGTTTGTTTGTTaGTTTGTTTTGGCAAGCTGCTCACCTGAGGCTATACAAATTACT +
Preference number: 6 (lower is better)
Translates to: LLLYFQIPHPCLFVC*FVLASCSPEAIQIT
Trigger: AGTAATTTGTATAGCCTCAGGTGAGCAGCTTGCCAAAACAAACAAACAAACAAACAAACAGGGGTGAGGGATTTGGAAATATAGTAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS TCA 72 bp AACATATGCAGAAATAAACTGGTCTACTGTAGGCAATaGTACGATTATGACCATGTCTGGGAGAAGAAGAAT +
Preference number: 6 (lower is better)
Translates to: NICRNKLVYCRQ*YDYDHVWEKKN
Trigger: ATTCTTCTTCTCCCAGACATGGTCATAATCGTATCATTGCCTACAGTAGACCAGTTTATTTCTGCATATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS TCA 72 bp ATTCAATCGAATCACATCATGTGGATAAAATCGAACTaGGGTAGAACTGGATACATGAGAATCTGTGTCACA +
Preference number: 6 (lower is better)
Translates to: IQSNHIMWIKSN*GRTGYMRICVT
Trigger: TGTGACACAGATTCTCATGTATCCAGTTCTACCTCAGTTCGATTTTATCCACATGATGTGATTCGATTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439984.7
CDS CCA 72 bp GATCAATGTCCTGTTGCTCCAACAAATCTGTATCAATaGTCAATAGTCTATTCAATCGAATCACATCATGTG +
Preference number: 6 (lower is better)
Translates to: DQCPVAPTNLYQ*SIVYSIESHHV
Trigger: CACATGATGTGATTCGATTGAATAGACTATTGACCATTGATACAGATTTGTTGGAGCAACAGGACATTGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439984.7
CDS CCA 72 bp TCTCCATCAAGTTATCTTCTGTTAATACTTCTAGTGTaGTGCTTAATACCTCTTGAATTTGTCCAAGAGCCA +
Preference number: 6 (lower is better)
Translates to: SPSSYLLLILLV*CLIPLEFVQEP
Trigger: TGGCTCTTGGACAAATTCAAGAGGTATTAAGCACCACACTAGAAGTATTAACAGAAGATAACTTGATGGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CAA 90 bp GTAAACACTATAACTAAATCCCTGGCTGATATAAACACCAGTGGATaGGTGAAAGTTATTCCATATAATTTGAACTTGGTTGCAGTCAGG +
Preference number: 6 (lower is better)
Translates to: VNTITKSLADINTSG*VKVIPYNLNLVAVR
Trigger: CCTGACTGCAACCAAGTTCAAATTATATGGAATAACTTTCACCAATCCACTGGTGTTTATATCAGCCAGGGATTTAGTTATAGTGTTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304743.7
ENST00000439984.7
ENST00000554691.5
CDS CAA 90 bp TATTCACCTATAACTAAATCCCTGGCTGATATAAACACCAGTGGATaGGTGAAAGTTATTCCATATAATTTGAACTTGGTTGCAGTCAGG +
Preference number: 6 (lower is better)
Translates to: YSPITKSLADINTSG*VKVIPYNLNLVAVR
Trigger: CCTGACTGCAACCAAGTTCAAATTATATGGAATAACTTTCACCAATCCACTGGTGTTTATATCAGCCAGGGATTTAGTTATAGGTGAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554707.1
CDS TCA 72 bp TATGGCAAACATATGAAAGTACACACACTCCTAATATaGCTTCACACATACCAGATATTGGATGCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: YGKHMKVHTLLI*LHTYQILDALL
Trigger: AAGAAGAGCATCCAATATCTGGTATGTGTGAAGTCATATTAGGAGTGTGTGTACTTTCATATGTTTGCCATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556846.1
CDS GCA 72 bp CCCTGTTTGTTTGTTTGTTTGTTTGTTTTGGCAAGCTaGTCACCTGAGGCTATACAAATTACTATACTATAT +
Preference number: 6 (lower is better)
Translates to: PCLFVCLFVLAS*SPEAIQITILY
Trigger: ATATAGTATAGTAATTTGTATAGCCTCAGGTGAGCAGCTTGCCAAAACAAACAAACAAACAAACAAACAGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554879.5
CDS CCA 72 bp CTCTGTCATAAATCCTGTGAAGTCATGTGCAACATCTaGAGTTTTCTCCAGCAGAAATTTATTATTTTGTAT +
Preference number: 6 (lower is better)
Translates to: LCHKSCEVMCNI*SFLQQKFIILY
Trigger: ATACAAAATAATAAATTTCTGCTGGAGAAAACTCCAGATGTTGCACATGACTTCACAGGATTTATGACAGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556272.1
CDS CAA 72 bp GTATATGACATCATGGTAAAGTATAACGTTCTTACCTaGTTCTTCACTTCCTTCCTTACAAAGACTAGAACT +
Preference number: 6 (lower is better)
Translates to: VYDIMVKYNVLT*FFTSFLTKTRT
Trigger: AGTTCTAGTCTTTGTAAGGAAGGAAGTGAAGAACAAGGTAAGAACGTTATACTTTACCATGATGTCATATAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553508.5