Pregenerated sensors for PCMTD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000168300Ensembl transcript IDs: ENST00000360540.9, ENST00000519554.5, ENST00000519559.1, ENST00000519975.1, ENST00000521046.1, ENST00000521344.1, ENST00000522514.6, ENST00000544451.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGTGGGAAGGAGTGAAATaGACATGGCATAGGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSLTHCMFQAKHATVLGLWEGVK*TWHRSQ Trigger: TTGGGACCTATGCCATGTTCATTTCACTCCTTCCCA...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCTGGGAAGGAGTGAAATaGACATGGCATAGGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: EAILGPVSNSLYVSGKTCWEGVK*TWHRSQ Trigger: TTGGGACCTATGCCATGTTCATTTCACTCCTTCCCA...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| 3UTR CAA 90 bp | AGTTCCACACTGCATTTGAATGAAGTTCACTGTGCCTTTAGTATTTaGTGTAAAGCTAACTTACAGAACATAGCCACAGGCAAAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: SSTLHLNEVHCAFSI*CKANLQNIATGKKY Trigger: GTACTTTTTGCCTGTGGCTATGTTCTGTAAGTTAGCTTTACACAAAATACTAAAGGCACAGTGAACTTCATTCAAATGCAGTGTGGAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| 3UTR TCA 72 bp | TGGGTTGGTCTGAGGTTGCTGATGGATTCTTGGGATTaGTCTGATGCTAGAAGCTATCTTAGGCCCTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: WVGLRLLMDSWD*SDARSYLRPCL Trigger: GAGACAGGGCCTAAGATAGCTTCTAGCATCAGATCAATCCCAAGAATCCATCAGCAACCTCAGACCAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCCTTGTAATGTCCAACATTTTGACAGTGTGGTGCTGATGAGTAGAAGACTGAGTTCCACACTGCATTaGAATGAAGTTCACTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: APCNVQHFDSVVLMSRRLSSTLH*NEVHCA Trigger: GGCACAGTGAACTTCATTCAAATGCAGTGTGGAACT...CAGTCTTCTACTCATCAGCACCACACTGTCAAAATGTTGGACATTACAAGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| 3UTR GCA 72 bp | CCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATaGCACGGTTCTAGGTCTGTTTTCTCATCTGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: PVSNSLYVSGKT*HGSRSVFSSAK Trigger: TTTTGCAGATGAGAAAACAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| 3UTR TCA 72 bp | GCAGACCAAGGAAACCTGAGAGTTCCACACTGCATTTaGATGAAGTTCACTGTGCCTTTAGTATTTTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: ADQGNLRVPHCI*MKFTVPLVFCV Trigger: TACACAAAATACTAAAGGCACAGTGAACTTCATTCAAATGCAGTGTGGAACTCTCAGGTTTCCTTGGTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGGCCCGGACCCGCGACTaGAGCAGCCAGAGCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLARTRD*SSQSLP Trigger: CGGGAGGCTCTGGCTGCTCCAGTCGCGGGTCCGGGC...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000544451.2 |
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| CDS-3UTR GCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGGCCGGGGTCCGGGCATaGGCAGAGAACCACGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLAGVRA*AENHGH Trigger: GTGCCCGTGGTTCTCTGCGCATGCCCGGACCCCGGC...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCGCCCGGACCCGCGACTaGAGCAGCCAGAGCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCARTRD*SSQSLP Trigger: CGGGAGGCTCTGGCTGCTCCAGTCGCGGGTCCGGGC...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCTCAGTGATGGGGCTGTaGCGCGGGCAGCGGCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCSVMGL*RGQRRA Trigger: TGCGCGCCGCTGCCCGCGCCACAGCCCCATCACTGA...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS-3UTR CCA 90 bp | CCTGAGAGTTCCACACTGCATTTGAATGAAGTTCACTGTGCCTTTAGTATTTTGGCCCGGACCCGCGACTaGAGCAGCCAGAGCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PESSTLHLNEVHCAFSILARTRD*SSQSLP Trigger: CGGGAGGCTCTGGCTGCTCCAGTCGCGGGTCCGGGC...CAAAATACTAAAGGCACAGTGAACTTCATTCAAATGCAGTGTGGAACTCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGCAGAACTCAAATCTGTaGCGCGGGCAGCGGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLQNSNL*RGQRRA Trigger: TGCGCGCCGCTGCCCGCGCCACAGATTTGAGTTCTG...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGAATAAATTAATCCTGTaGCGCGGGCAGCGGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLNKLIL*RGQRRA Trigger: TGCGCGCCGCTGCCCGCGCCACAGGATTAATTTATT...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522514.6 |
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| CDS-3UTR TCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCAAAAATTCTTCTCAGTaGTGGGGCTGTGGCGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCKNSSQ*WGCGAG Trigger: GCCCGCGCCACAGCCCCATCACTGAGAAGAATTTTT...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS-3UTR TCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGCACGATCAATCGCTCTaGAGGCTTGCTCCACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLHDQSL*RLAPLF Trigger: AAAGAGTGGAGCAAGCCTTCAGAGCGATTGATCGTG...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS-3UTR GCA 90 bp | GCCCCTTGTAATGTCCAACATTTTGACAGTGTGGTGCTGATGAGTAGAAGACTGATCGCTCTGAAGGCTTaGTCCACTCTTTCAGTACGA | + |
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Preference number: 4 (lower is better) Translates to: APCNVQHFDSVVLMSRRLIALKA*STLSVR Trigger: TCGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGAT...CAGTCTTCTACTCATCAGCACCACACTGTCAAAATGTTGGACATTACAAGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR GCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGATCGCTCTGAAGGCTTaGTCCACTCTTTCAGTACGA | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLIALKA*STLSVR Trigger: TCGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGAT...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCTTCATGGACCAAGCCTaGTTTAAGTGCAGAGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCFMDQA*FKCRGN Trigger: GTTGCCTCTGCACTTAAAGCAGGCTTGGTCCATGAA...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS-3UTR GCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCATCGCTCTGAAGGCTTaGTCCACTCTTTCAGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCIALKA*STLSVR Trigger: TCGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGAT...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS-3UTR GCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGGTTTCAGGCAAAACATaGCACGGTTCTAGGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLVSGKT*HGSRSV Trigger: AACAGACCTAGAACCGTGGCATGTTTTGCCTGAAAC...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGAGTTCCACACTGCATTTGAATGAAGTTCACTGTGCCTTTAGTATTTTGCACGATCAATCGCTCTaGAGGCTTGCTCCACTCTTT | + |
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Preference number: 4 (lower is better) Translates to: PESSTLHLNEVHCAFSILHDQSL*RLAPLF Trigger: AAAGAGTGGAGCAAGCCTTCAGAGCGATTGATCGTG...CAAAATACTAAAGGCACAGTGAACTTCATTCAAATGCAGTGTGGAACTCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR TCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGATATTCCACCACATCTaGATGAAGCTCAATCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLIFHHI*MKLNPM Trigger: CATGGGATTGAGCTTCATTCAGATGTGGTGGAATAT...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCAAGCCTGCTTTAAGTaGAGAGGCAACTATACAGTG | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCQACFK*RGNYTV Trigger: CACTGTATAGTTGCCTCTGCACTTAAAGCAGGCTTG...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS-3UTR GCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCGTTTCAGGCAAAACATaGCACGGTTCTAGGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCVSGKT*HGSRSV Trigger: AACAGACCTAGAACCGTGGCATGTTTTGCCTGAAAC...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGTTGTCATGGGATTCATaGACCAAGCCTGCTTTAAGT | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLLSWDS*TKPALS Trigger: ACTTAAAGCAGGCTTGGTCCATGAATCCCATGACAA...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS-3UTR CCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCTCAAAGCTCTTGTCATaGGATTCATGGACCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCSKLLS*DSWTKP Trigger: AGGCTTGGTCCATGAATCCCATGACAAGAGCTTTGA...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGCTGTCAGAAGCTATCTaGAGGCAATTACCAACAACA | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLLSEAI*RQLPTT Trigger: TGTTGTTGGTAATTGCCTCCAGATAGCTTCTGACAG...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGATTATCTTCTTGGGTTaGTCTGAGGTTGCTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLIIFLG*SEVADG Trigger: TCCATCAGCAACCTCAGACCAACCCAAGAAGATAAT...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR TCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCATAAATGCAAGGTGCTaGCAAGTGGATGTTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCINARC*QVDVSM Trigger: CATGGAAACATCCACTTGTCAGCACCTTGCATTTAT...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS-3UTR TCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGTTCCAAGTCTTCCAATaGTTTAACAGGCTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLFQVFQ*FNRLCF Trigger: GAAGCAAAGCCTGTTAAATCATTGGAAGACTTGGAA...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCTGTCAGAAGCTATCTaGAGGCAATTACCAACAACA | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCLSEAI*RQLPTT Trigger: TGTTGTTGGTAATTGCCTCCAGATAGCTTCTGACAG...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCATTATCTTCTTGGGTTaGTCTGAGGTTGCTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCIIFLG*SEVADG Trigger: TCCATCAGCAACCTCAGACCAACCCAAGAAGATAAT...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | TTGTGTAAAGCTAACTTACAGAACATAGCCACAGGCAAAAAGTACTTCACAATAAATAAATTAATCCTGTaGCGCGGGCAGCGGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LCKANLQNIATGKKYFTINKLIL*RGQRRA Trigger: TGCGCGCCGCTGCCCGCGCCACAGGATTAATTTATT...TATTGTGAAGTACTTTTTGCCTGTGGCTATGTTCTGTAAGTTAGCTTTACACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR TCA 90 bp | GCCCCTTGTAATGTCCAACATTTTGACAGTGTGGTGCTGATGAGTAGAAGACTGAAAGACAATCCTGGTTaGAGTTTCAATGCTTCCATA | + |
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Preference number: 4 (lower is better) Translates to: APCNVQHFDSVVLMSRRLKDNPG*SFNASI Trigger: TATGGAAGCATTGAAACTTCAACCAGGATTGTCTTT...CAGTCTTCTACTCATCAGCACCACACTGTCAAAATGTTGGACATTACAAGGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR TCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGATAATCTGTGTTAACTaGTCCTCTATAGGCATGACT | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLIICVN*SSIGMT Trigger: AGTCATGCCTATAGAGGATCAGTTAACACAGATTAT...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR TCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCTTCCAAGTCTTCCAATaGTTTAACAGGCTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCFQVFQ*FNRLCF Trigger: GAAGCAAAGCCTGTTAAATCATTGGAAGACTTGGAA...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGAGTTCCACACTGCATTTGAATGAAGTTCACTGTGCCTTTAGTATTTTGATAAATGCAAGGTGCTaGCAAGTGGATGTTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: PESSTLHLNEVHCAFSILINARC*QVDVSM Trigger: CATGGAAACATCCACTTGTCAGCACCTTGCATTTAT...CAAAATACTAAAGGCACAGTGAACTTCATTCAAATGCAGTGTGGAACTCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR TCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCAAAGACAATCCTGGTTaGAGTTTCAATGCTTCCATA | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCKDNPG*SFNASI Trigger: TATGGAAGCATTGAAACTTCAACCAGGATTGTCTTT...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS-3UTR TCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCATAATCTGTGTTAACTaGTCCTCTATAGGCATGACT | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCIICVN*SSIGMT Trigger: AGTCATGCCTATAGAGGATCAGTTAACACAGATTAT...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGAGTTCCACACTGCATTTGAATGAAGTTCACTGTGCCTTTAGTATTTTGATACATAGCTGCTTCTaGGAAAGGGGACTAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: PESSTLHLNEVHCAFSILIHSCF*ERGLRD Trigger: ATCTCTTAGTCCCCTTTCTCAGAAGCAGCTATGTAT...CAAAATACTAAAGGCACAGTGAACTTCATTCAAATGCAGTGTGGAACTCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR GCA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGATTACCAACAACAAATaGAGGTTCACAGAACTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LSLTHCMFQAKHATVLGLITNNK*RFTELK Trigger: TTTGAGTTCTGTGAACCTGCATTTGTTGTTGGTAAT...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | GATGACTTTTCTCCTTATTGTAGAATTTCAAGTACAGTAGTCTCCCTTTATGCAGGTTTCCGCTTTCTATaGTCAACCAAGGTGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: DDFSPYCRISSTVVSLYAGFRFL*STKVES Trigger: GGACTCCACCTTGGTTGACCATAGAAAGCGGAAACC...TGCATAAAGGGAGACTACTGTACTTGAAATTCTACAATAAGGAGAAAAGTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519554.5 |
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| CDS-3UTR GCA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCATTACCAACAACAAATaGAGGTTCACAGAACTCAAA | + |
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Preference number: 4 (lower is better) Translates to: EAILGPVSNSLYVSGKTCITNNK*RFTELK Trigger: TTTGAGTTCTGTGAACCTGCATTTGTTGTTGGTAAT...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000522514.6 ENST00000544451.2 |
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| CDS-3UTR CCA 90 bp | GATGACTTTTCTCCTTATTGTAGAATTTCAAGTACAGTAGTCTCCCTTTATGCATATGGTCAACCAAGGTaGAGTCCCACAGAATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: DDFSPYCRISSTVVSLYAYGQPR*SPTESG Trigger: ACCAGATTCTGTGGGACTCCACCTTGGTTGACCATA...TGCATAAAGGGAGACTACTGTACTTGAAATTCTACAATAAGGAGAAAAGTCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519554.5 |
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| CDS-3UTR CCA 90 bp | TTGGTTACTGATGACTTTTCTCCTTATTGTAGAATTTCAAGTACAGTAGTCTCCCTGTCAGAAGCTATCTaGAGGCAATTACCAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVTDDFSPYCRISSTVVSLSEAI*RQLPTT Trigger: TGTTGTTGGTAATTGCCTCCAGATAGCTTCTGACAG...GGAGACTACTGTACTTGAAATTCTACAATAAGGAGAAAAGTCATCAGTAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519554.5 |
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| CDS-3UTR TCA 90 bp | GATGACTTTTCTCCTTATTGTAGAATTTCAAGTACAGTAGTCTCCCTTTATGCAATAATCTGTGTTAACTaGTCCTCTATAGGCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: DDFSPYCRISSTVVSLYAIICVN*SSIGMT Trigger: AGTCATGCCTATAGAGGATCAGTTAACACAGATTAT...TGCATAAAGGGAGACTACTGTACTTGAAATTCTACAATAAGGAGAAAAGTCATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519554.5 |
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| CDS-3UTR GCA 90 bp | TTGGTTACTGATGACTTTTCTCCTTATTGTAGAATTTCAAGTACAGTAGTCTCCATTACCAACAACAAATaGAGGTTCACAGAACTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LVTDDFSPYCRISSTVVSITNNK*RFTELK Trigger: TTTGAGTTCTGTGAACCTGCATTTGTTGTTGGTAAT...GGAGACTACTGTACTTGAAATTCTACAATAAGGAGAAAAGTCATCAGTAACCAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519554.5 |
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| CDS CCA 90 bp | AGACGCCGCTACCACCACAATAACAACACGGACGCCACCGCCGAGTaGAGAGGCGGGGCCCGGACCCGCGACTGGAGCAGCCAGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRRYHHNNNTDATAE*RGGARTRDWSSQSL Trigger: GAGGCTCTGGCTGCTCCAGTCGCGGGTCCGGGCCCCGCCTCTCCACTCGGCGGTGGCGTCCGTGTTGTTATTGTGGTGGTAGCGGCGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000521344.1 ENST00000544451.2 |
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| CDS-3UTR CAA 90 bp | GCCCCTTGTAATGTCCAACATTTTGACAGTGTGGTGCTGATGAGTAGAAGACTGAATCGCTCTGAAGGCTaGCTCCACTCTTTCAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: APCNVQHFDSVVLMSRRLNRSEG*LHSFST Trigger: CGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGATT...CAGTCTTCTACTCATCAGCACCACACTGTCAAAATGTTGGACATTACAAGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR CAA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGAATCGCTCTGAAGGCTaGCTCCACTCTTTCAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: LSLTHCMFQAKHATVLGLNRSEG*LHSFST Trigger: CGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGATT...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS-3UTR CAA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCAATCGCTCTGAAGGCTaGCTCCACTCTTTCAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: EAILGPVSNSLYVSGKTCNRSEG*LHSFST Trigger: CGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGATT...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS-3UTR CAA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGCTCTCCAGTTTTTCCTaGGCATATTCCACCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLTHCMFQAKHATVLGLLSSFS*AYSTTS Trigger: AGATGTGGTGGAATATGCCAAGGAAAAACTGGAGAG...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS CCA 90 bp | GTGGTTTTCTTTATAGGTGCATGTTGGAATATCTTCATCTTGAGATaGACAGATGATTTCGTTCACAGCAGGGACCTTGCCAACTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVFFIGACWNIFILR*TDDFVHSRDLANLP Trigger: GGGCAAGTTGGCAAGGTCCCTGCTGTGAACGAAATCATCTGTCCATCTCAAGATGAAGATATTCCAACATGCACCTATAAAGAAAACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519559.1 |
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| CDS-3UTR CAA 90 bp | GCCCCTTGTAATGTCCAACATTTTGACAGTGTGGTGCTGATGAGTAGAAGACTGGATCCATCATTTCAGTaGAGGACTCTGAGGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: APCNVQHFDSVVLMSRRLDPSFQ*RTLRSK Trigger: TTTTGACCTCAGAGTCCTCAACTGAAATGATGGATC...CAGTCTTCTACTCATCAGCACCACACTGTCAAAATGTTGGACATTACAAGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS TCA 90 bp | TGTCTCTGTAGCCTTCCAAATAGTAATCTCCACGATCAATCGCTCTaGAGGCTTGCTCCACTCTTTCAGTACGAATATACTGAGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLCSLPNSNLHDQSL*RLAPLFQYEYTELL Trigger: AAGAAGCTCAGTATATTCGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGATTGATCGTGGAGATTACTATTTGGAAGGCTACAGAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000360540.9 ENST00000521046.1 ENST00000521344.1 ENST00000522514.6 |
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| CDS GCA 90 bp | ACACACCAAATGGACTTTTCCTGCCAGCCCAAGGACCAAAGCCCGTaGAATGTTTCTTCTAAGAGGAGTTATATTGTGAGTTCAAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: THQMDFSCQPKDQSP*NVSSKRSYIVSSKQ Trigger: TTGTTTTGAACTCACAATATAACTCCTCTTAGAAGAAACATTGCACGGGCTTTGGTCCTTGGGCTGGCAGGAAAAGTCCATTTGGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519975.1 |
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| CDS CCA 90 bp | ATGTTTGAACAAAGAATGCTCCTCATGTCCTCAAAGCTCTTGTCATaGGATTCATGGACCAAGCCTGCTTTAAGTGCAGAGGCAACTATA | + |
|
Preference number: 5 (lower is better) Translates to: MFEQRMLLMSSKLLS*DSWTKPALSAEATI Trigger: TATAGTTGCCTCTGCACTTAAAGCAGGCTTGGTCCATGAATCCCATGACAAGAGCTTTGAGGACATGAGGAGCATTCTTTGTTCAAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS-3UTR CAA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGAAAAGACAATCCTGGTaGAAGTTTCAATGCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLTHCMFQAKHATVLGLKRQSW*KFQCFH Trigger: ATGGAAGCATTGAAACTTCAACCAGGATTGTCTTTT...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS-3UTR CAA 90 bp | GCCCCTTGTAATGTCCAACATTTTGACAGTGTGGTGCTGATGAGTAGAAGACTGAAAAGACAATCCTGGTaGAAGTTTCAATGCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: APCNVQHFDSVVLMSRRLKRQSW*KFQCFH Trigger: ATGGAAGCATTGAAACTTCAACCAGGATTGTCTTTT...CAGTCTTCTACTCATCAGCACCACACTGTCAAAATGTTGGACATTACAAGGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS-3UTR CAA 90 bp | CTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCCACGGTTCTAGGTCTGAAATTAAGCCCACCATaGTACTTAAATATCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLTHCMFQAKHATVLGLKLSPP*YLNIRF Trigger: GAACCGGATATTTAAGTACAATGGTGGGCTTAATTT...CAGACCTAGAACCGTGGCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS TCA 90 bp | CTTTATAGGTGCATGTTGGAATATCTTCATCTTGAGATGGACAGATaGTTTCGTTCACAGCAGGGACCTTGCCAACTTGCCCATATAATT | + |
|
Preference number: 5 (lower is better) Translates to: LYRCMLEYLHLEMDR*FRSQQGPCQLAHII Trigger: AATTATATGGGCAAGTTGGCAAGGTCCCTGCTGTGAACGAAATCATCTGTCCATCTCAAGATGAAGATATTCCAACATGCACCTATAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519559.1 |
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| CDS-3UTR CAA 90 bp | GAAGCTATCTTAGGCCCTGTCTCTAACTCACTGTATGTTTCAGGCAAAACATGCAAATTAAGCCCACCATaGTACTTAAATATCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EAILGPVSNSLYVSGKTCKLSPP*YLNIRF Trigger: GAACCGGATATTTAAGTACAATGGTGGGCTTAATTT...GCATGTTTTGCCTGAAACATACAGTGAGTTAGAGACAGGGCCTAAGATAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360540.9 ENST00000522514.6 |
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| CDS CCA 90 bp | CACAGAACTCAAATCTTAGCAGTGGTTTTCTTTATAGGTGCATGTTaGAATATCTTCATCTTGAGATGGACAGATGATTTCGTTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRTQILAVVFFIGAC*NIFILRWTDDFVHS Trigger: GCTGTGAACGAAATCATCTGTCCATCTCAAGATGAAGATATTCCAACATGCACCTATAAAGAAAACCACTGCTAAGATTTGAGTTCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519559.1 |
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| CDS-3UTR CAA 90 bp | GATGACTTTTCTCCTTATTGTAGAATTTCAAGTACAGTAGTCTCCCTTTATGCACTCTCCAGTTTTTCCTaGGCATATTCCACCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: DDFSPYCRISSTVVSLYALSSFS*AYSTTS Trigger: AGATGTGGTGGAATATGCCAAGGAAAAACTGGAGAG...TGCATAAAGGGAGACTACTGTACTTGAAATTCTACAATAAGGAGAAAAGTCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000519554.5 |
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| CDS-3UTR CAA 90 bp | TTGTGTAAAGCTAACTTACAGAACATAGCCACAGGCAAAAAGTACTTCACAATAAGTTCCACACTGCATTaGAATGAAGTTCACTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCKANLQNIATGKKYFTISSTLH*NEVHCA Trigger: GGCACAGTGAACTTCATTCAAATGCAGTGTGGAACT...TATTGTGAAGTACTTTTTGCCTGTGGCTATGTTCTGTAAGTTAGCTTTACACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521344.1 |
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| CDS GCA 90 bp | TTTACACAATTTCAAAGAGCTCATGGATTTCAGCGTAAGTGCTCTTaGTCTATAGCAATGCAGAATTTTAGGATTACACACCAAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FTQFQRAHGFQRKCS*SIAMQNFRITHQMD Trigger: GTCCATTTGGTGTGTAATCCTAAAATTCTGCATTGCTATAGAGCAAGAGCACTTACGCTGAAATCCATGAGCTCTTTGAAATTGTGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519975.1 |
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| CDS CCA 72 bp | ACCGCCGAGTGGAGAGGCGGGGCCCGGACCCGCGACTaGAGCAGCCAGAGCCTCCCGGACTCCGGAGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: TAEWRGGARTRD*SSQSLPDSGAA Trigger: GGCGGCTCCGGAGTCCGGGAGGCTCTGGCTGCTCCAGTCGCGGGTCCGGGCCCCGCCTCTCCACTCGGCGGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000521344.1 ENST00000544451.2 |
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| CDS CCA 72 bp | TACCACCACAATAACAACACGGACGCCACCGCCGAGTaGAGAGGCGGGGCCCGGACCCGCGACTGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: YHHNNNTDATAE*RGGARTRDWSS Trigger: GCTGCTCCAGTCGCGGGTCCGGGCCCCGCCTCTCCACTCGGCGGTGGCGTCCGTGTTGTTATTGTGGTGGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000521344.1 ENST00000544451.2 |
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| CDS CCA 72 bp | CAAAGAATGCTCCTCATGTCCTCAAAGCTCTTGTCATaGGATTCATGGACCAAGCCTGCTTTAAGTGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QRMLLMSSKLLS*DSWTKPALSAE Trigger: CTCTGCACTTAAAGCAGGCTTGGTCCATGAATCCCATGACAAGAGCTTTGAGGACATGAGGAGCATTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS CCA 72 bp | ATGCACAGTTTCACTTTCCACGGTTTCCGCTTTCTATaGTCAACCAAGGTGGAGTCCCACAGAATCTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: MHSFTFHGFRFL*STKVESHRIWF Trigger: AAACCAGATTCTGTGGGACTCCACCTTGGTTGACCATAGAAAGCGGAAACCGTGGAAAGTGAAACTGTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519554.5 |
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| CDS CAA 90 bp | CACAGTATGTTTGAACAAAGAATGCTCCTCATGTCCTCAAAGCTCTaGTCATGGGATTCATGGACCAAGCCTGCTTTAAGTGCAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HSMFEQRMLLMSSKL*SWDSWTKPALSAEA Trigger: TGCCTCTGCACTTAAAGCAGGCTTGGTCCATGAATCCCATGACAAGAGCTTTGAGGACATGAGGAGCATTCTTTGTTCAAACATACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS TCA 72 bp | TGCATGTTGGAATATCTTCATCTTGAGATGGACAGATaGTTTCGTTCACAGCAGGGACCTTGCCAACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CMLEYLHLEMDR*FRSQQGPCQLA Trigger: GGCAAGTTGGCAAGGTCCCTGCTGTGAACGAAATCATCTGTCCATCTCAAGATGAAGATATTCCAACATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519559.1 |
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| CDS GCA 72 bp | CAGAATTTTAGGATTACACACCAAATGGACTTTTCCTaGCAGCCCAAGGACCAAAGCCCGTGCAATGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QNFRITHQMDFS*QPKDQSPCNVS Trigger: AGAAACATTGCACGGGCTTTGGTCCTTGGGCTGGCAGGAAAAGTCCATTTGGTGTGTAATCCTAAAATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519975.1 |
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| CDS TCA 72 bp | AGCCTTCCAAATAGTAATCTCCACGATCAATCGCTCTaGAGGCTTGCTCCACTCTTTCAGTACGAATATACT | + |
|
Preference number: 6 (lower is better) Translates to: SLPNSNLHDQSL*RLAPLFQYEYT Trigger: AGTATATTCGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGATTGATCGTGGAGATTACTATTTGGAAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000360540.9 ENST00000521046.1 ENST00000521344.1 ENST00000522514.6 |
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| CDS GCA 72 bp | CAGATGATTTCGTTCACAGCAGGGACCTTGCCAACTTaGCCATATAATTCTTTTGATAAGCTGCTAGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QMISFTAGTLPT*PYNSFDKLLGD Trigger: ATCTCCTAGCAGCTTATCAAAAGAATTATATGGGCAAGTTGGCAAGGTCCCTGCTGTGAACGAAATCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519559.1 |
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| CDS CAA 72 bp | TTTGAACAAAGAATGCTCCTCATGTCCTCAAAGCTCTaGTCATGGGATTCATGGACCAAGCCTGCTTTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FEQRMLLMSSKL*SWDSWTKPALS Trigger: ACTTAAAGCAGGCTTGGTCCATGAATCCCATGACAAGAGCTTTGAGGACATGAGGAGCATTCTTTGTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360540.9 |
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| CDS CAA 72 bp | CAAATAGTAATCTCCACGATCAATCGCTCTGAAGGCTaGCTCCACTCTTTCAGTACGAATATACTGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QIVISTINRSEG*LHSFSTNILSF Trigger: GAAGCTCAGTATATTCGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGATTGATCGTGGAGATTACTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000360540.9 ENST00000521046.1 ENST00000521344.1 ENST00000522514.6 |
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| CDS CAA 90 bp | TTAGCAGTGGTTTTCTTTATAGGTGCATGTTGGAATATCTTCATCTaGAGATGGACAGATGATTTCGTTCACAGCAGGGACCTTGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LAVVFFIGACWNIFI*RWTDDFVHSRDLAN Trigger: GTTGGCAAGGTCCCTGCTGTGAACGAAATCATCTGTCCATCTCAAGATGAAGATATTCCAACATGCACCTATAAAGAAAACCACTGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519559.1 |
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| CDS TCA 72 bp | GCTCTCCAGTTTTTCCTTGGCATATTCCACCACATCTaGATGAAGCTCAATCCCATGATTTATTCCAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALQFFLGIFHHI*MKLNPMIYSKR Trigger: CCTTTTGGAATAAATCATGGGATTGAGCTTCATTCAGATGTGGTGGAATATGCCAAGGAAAAACTGGAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000360540.9 ENST00000519559.1 ENST00000519975.1 ENST00000522514.6 |
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| CDS CCA 72 bp | TCCGGTTCCACTTCCCAGGTTAAGAAAAGACAATCCTaGTTGAAGTTTCAATGCTTCCATAACTTCAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: SGSTSQVKKRQS*LKFQCFHNFRI Trigger: TATTCTGAAGTTATGGAAGCATTGAAACTTCAACCAGGATTGTCTTTTCTTAACCTGGGAAGTGGAACCGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000360540.9 ENST00000521046.1 ENST00000521344.1 ENST00000522514.6 |
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| CDS GCA 72 bp | TTTCAAAGAGCTCATGGATTTCAGCGTAAGTGCTCTTaGTCTATAGCAATGCAGAATTTTAGGATTACACAC | + |
|
Preference number: 6 (lower is better) Translates to: FQRAHGFQRKCS*SIAMQNFRITH Trigger: GTGTGTAATCCTAAAATTCTGCATTGCTATAGAGCAAGAGCACTTACGCTGAAATCCATGAGCTCTTTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519975.1 |
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| CDS CAA 72 bp | GGTTCCACTTCCCAGGTTAAGAAAAGACAATCCTGGTaGAAGTTTCAATGCTTCCATAACTTCAGAATAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GSTSQVKKRQSW*KFQCFHNFRIN Trigger: ATTTATTCTGAAGTTATGGAAGCATTGAAACTTCAACCAGGATTGTCTTTTCTTAACCTGGGAAGTGGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000360540.9 ENST00000521046.1 ENST00000521344.1 ENST00000522514.6 |
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| CDS CAA 90 bp | AATGCAGGTTCACAGAACTCAAATTTATCAAAGCTATCACTATTTTaGATGAAGCTCTCCAGTTTTTCCTTGGCATATTCCACCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: NAGSQNSNLSKLSLF*MKLSSFSLAYSTTS Trigger: AGATGTGGTGGAATATGCCAAGGAAAAACTGGAGAGCTTCATCAAAAATAGTGATAGCTTTGATAAATTTGAGTTCTGTGAACCTGCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000360540.9 ENST00000519554.5 ENST00000522514.6 |
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| CDS CAA 72 bp | CTCATTTTATGGTGCACTGATTTTTGCTGCATTCAATaGAGCCAGTCAGGATCAATAATAGTGTTCAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LILWCTDFCCIQ*SQSGSIIVFKN Trigger: ATTCTTGAACACTATTATTGATCCTGACTGGCTCAATTGAATGCAGCAAAAATCAGTGCACCATAAAATGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000519975.1 |
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