RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000078674

Ensembl transcript IDs: ENST00000325083.12, ENST00000517545.5, ENST00000517730.5, ENST00000517836.5, ENST00000518537.5, ENST00000518762.1, ENST00000518930.1, ENST00000518936.5, ENST00000518985.1, ENST00000519253.5, ENST00000519802.5, ENST00000522275.5, ENST00000522777.1, ENST00000523055.5, ENST00000523540.1, ENST00000523896.1, ENST00000524203.1, ENST00000524226.5, ENST00000524356.1

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACACACACGTTTCCTGGCTaGCTCGGCCCCAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTHTFPG*LGPSGR
Trigger: GCGGCCACTGGGGCCGAGGCAGCCAGGAAACGTGTG...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp ATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAGGCCCACACGTTTCCTaGCTGCCTCGGCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: MPTQHTHASSTYPLRMFTGPHVS*LPRPQW
Trigger: CCACTGGGGCCGAGGCAGCCAGGAAACGTGTGGGCC...TGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp ATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTCTGCCTCGGCCCCAGTaGCCGCCTTTTCGACCTCAG +
Preference number: 4 (lower is better)
Translates to: IMPTQHTHASSTYPLRMFLPRPQ*PPFRPQ
Trigger: CTGAGGTCGAAAAGGCGGCCACTGGGGCCGAGGCAG...AAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGACGCGCGGCGGGACATaGGCCGTCTCCTCGGCAACG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLTRGGT*AVSSAT
Trigger: CGTTGCCGAGGAGACGGCGCATGTCCCGCCGCGCGT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325083.12
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCACACGTTTCCTGGCTaGCTCGGCCCCAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKHTFPG*LGPSGR
Trigger: GCGGCCACTGGGGCCGAGGCAGCCAGGAAACGTGTG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000519253.5
CDS-3UTR GCA 90 bp ATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACACTGGCTGCTCTCCATTaGAGGTTCTCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: MPTQHTHASSTYPLRMFTLAALH*RFSPPI
Trigger: GATGGGAGGGGAGAACCTGCAATGGAGAGCAGCCAG...TGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGGCCCACACGTTTCCTaGCTGCCTCGGCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKGPHVS*LPRPQW
Trigger: CCACTGGGGCCGAGGCAGCCAGGAAACGTGTGGGCC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000519253.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCACACGTTTCCTGGCTaGCTCGGCCCCAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLHTFPG*LGPSGR
Trigger: GCGGCCACTGGGGCCGAGGCAGCCAGGAAACGTGTG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000519253.5
CDS-3UTR GCA 90 bp ATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAGCTAGAAGTGCAGCCTaGCGTCCCTGTAGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: MPTQHTHASSTYPLRMFTARSAA*RPCRAL
Trigger: AAGAGCTCTACAGGGACGGCAGGCTGCACTTCTAGC...TGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTGCCTCGGCCCCAGTaGCCGCCTTTTCGACCTCAG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLPRPQ*PPFRPQ
Trigger: CTGAGGTCGAAAAGGCGGCCACTGGGGCCGAGGCAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000519253.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTGCCTCGGCCCCAGTaGCCGCCTTTTCGACCTCAG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLPRPQ*PPFRPQ
Trigger: CTGAGGTCGAAAAGGCGGCCACTGGGGCCGAGGCAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000519253.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGCCCACACGTTTCCTaGCTGCCTCGGCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGPHVS*LPRPQW
Trigger: CCACTGGGGCCGAGGCAGCCAGGAAACGTGTGGGCC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000519253.5
CDS-3UTR TCA 90 bp ATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTTCTGGCCGTGGTATCTaGAGCCTCAGACTGCACATC +
Preference number: 4 (lower is better)
Translates to: IMPTQHTHASSTYPLRMFSGRGI*SLRLHI
Trigger: GATGTGCAGTCTGAGGCTTCAGATACCACGGCCAGA...AAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACAAGCCTGCTTACAATCTaGCTGCTCTCCATTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTSLLTI*LLSIAG
Trigger: ACCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCT...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp AATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTGAGGATCTCTGGCCGTaGTATCTGAAGCCTCAGACT +
Preference number: 4 (lower is better)
Translates to: NYAHTTHTRLFYLSLKNVEDLWP*YLKPQT
Trigger: AGTCTGAGGCTTCAGATACCACGGCCAGAGATCCTC...AACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACATATTGGATTCTCCATTaGCAACCGGTGCCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTYWILH*QPVPSL
Trigger: TAGGCTTGGCACCGGTTGTCAATGGAGAATCCAATA...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACAACCAGATCCCACAGCTaGATCTATAGTCCGAACATC +
Preference number: 4 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTTRSHS*IYSPNI
Trigger: GATGTTCGGACTATAGATTCAGCTGTGGGATCTGGT...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGGCGGGAGCCGCAATaGGAGCTAGACTGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGREPQ*ELDWSH
Trigger: ATGACTCCAGTCTAGCTCGCATTGCGGCTCCCGCCC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325083.12
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTGGCTGCTCTCCATTaGAGGTTCTCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLAALH*RFSPPI
Trigger: GATGGGAGGGGAGAACCTGCAATGGAGAGCAGCCAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACAATGCGAGCTAGACTaGAGTCATGTGACCCGCCGG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTQCELD*SHVTRR
Trigger: CCGGCGGGTCACATGACTCCAGTCTAGCTCGCATTG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325083.12
CDS-3UTR CCA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACAATTGTCTGGAACAGCTaGAGGCTGAGAATCACGAAG +
Preference number: 4 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTIVWNS*RLRITK
Trigger: CTTCGTGATTCTCAGCCTCCAGCTGTTCCAGACAAT...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCCTGGAGGGAAGTCTaGACATCCACAGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAWREV*TSTGPS
Trigger: AGAAGGCCCTGTGGATGTCCAGACTTCCCTCCAGGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCCTGGAGGGAAGTCTaGACATCCACAGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTAWREV*TSTGPS
Trigger: AGAAGGCCCTGTGGATGTCCAGACTTCCCTCCAGGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACACGGTTTTCACTAAGCTaGCGTTTGTTGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTRFSLS*RLLLAA
Trigger: AGCTGCTAACAACAAACGTCAGCTTAGTGAAAACCG...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp ATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAGTTTTTCAGATGGATTaGGGTGGCCTTCGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: MPTQHTHASSTYPLRMFTVFQMD*GGLRFH
Trigger: GTGAAAACGAAGGCCACCTCAATCCATCTGAAAAAC...TGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp GAAAGTAACATCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCTCCATAGGCTCCTGCTaGGGATCTCTGGCCGTGGTA +
Preference number: 4 (lower is better)
Translates to: ESNISSQKLCYITSLRQLSIGSC*GSLAVV
Trigger: TACCACGGCCAGAGATCCTCAGCAGGAGCCTATGGA...GAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGATGTTACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCTGGCTGCTCTCCATTaGAGGTTCTCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLAALH*RFSPPI
Trigger: GATGGGAGGGGAGAACCTGCAATGGAGAGCAGCCAG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCTAGAAGTGCAGCCTaGCGTCCCTGTAGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTARSAA*RPCRAL
Trigger: AAGAGCTCTACAGGGACGGCAGGCTGCACTTCTAGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGGTGCGATGCACTACTaGCTCTTTCCTTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKGAMHY*LFPCLQ
Trigger: CTGGAGGCAAGGAAAGAGGCAGTAGTGCATCGCACC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTGGGAGAAGGAGGGTaGGATGCACTACTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLGEGG*DALLPL
Trigger: AAGAGGCAGTAGTGCATCGCACCCTCCTTCTCCCAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTTAGGATCTCATTGTaGTGGGAGAAGAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLRISL*WEKRGG
Trigger: CCCGCCCCTCTTCTCCCACCACAATGAGATCCTAAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325083.12
CDS-3UTR CCA 90 bp ATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACACTGGAGTTTTTCAGATaGATTGAGGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: MPTQHTHASSTYPLRMFTLEFFR*IEVAFV
Trigger: AACGAAGGCCACCTCAATCCATCTGAAAAACTCCAG...TGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGCCTGGAGGGAAGTCTaGACATCCACAGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLAWREV*TSTGPS
Trigger: AGAAGGCCCTGTGGATGTCCAGACTTCCCTCCAGGC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACACCCAATCCATATTGTTaGGCCTGTCATCAACATTCT +
Preference number: 4 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTPNPYC*ACHQHS
Trigger: AGAATGTTGATGACAGGCTCAACAATATGGATTGGG...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCCTTCCAACTCCTGGTaGCGACTCCGGAGAAATATC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKPSNSW*RLRRNI
Trigger: GATATTTCTCCGGAGTCGTCACCAGGAGTTGGAAGG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACCTTCCAACTCCTGGTaGCGACTCCGGAGAAATATC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTPSNSW*RLRRNI
Trigger: GATATTTCTCCGGAGTCGTCACCAGGAGTTGGAAGG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp AATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTCTGGGACAGACATCTaGCTCATGTATCTACTGTGT +
Preference number: 4 (lower is better)
Translates to: NYAHTTHTRLFYLSLKNVSGTDI*LMYLLC
Trigger: ACACAGTAGATACATGAGTCAGATGTCTGTCCCAGA...AACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCCATAGGCTCCTGCTaGGGATCTCTGGCAAGGATT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSIGSC*GSLARI
Trigger: AATCCTTGCCAGAGATCCTCAGCAGGAGCCTATGGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGACCTTGCCTCCTCTaGTGTTCAGCCATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKRPCLL*CSAIRA
Trigger: AGCTCTGATGGCTGAACATCAGAGGAGGCAAGGTCT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATTGCAGCTCAGAAACTaGTCCTTTCCCGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLQLRN*SFPAPH
Trigger: GTGTGGAGCGGGAAAGGAGCAGTTTCTGAGCTGCAA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000519253.5
CDS-3UTR GCA 90 bp ATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTGTTGTTAGCAGCTGTTaGTCTACCTTGGGAATCACT +
Preference number: 4 (lower is better)
Translates to: IMPTQHTHASSTYPLRMFVVSSC*STLGIT
Trigger: AGTGATTCCCAAGGTAGAGCAACAGCTGCTAACAAC...AAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGCTAGAAGTGCAGCCTaGCGTCCCTGTAGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLARSAA*RPCRAL
Trigger: AAGAGCTCTACAGGGACGGCAGGCTGCACTTCTAGC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGTGCGATGCACTACTaGCTCTTTCCTTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGAMHY*LFPCLQ
Trigger: CTGGAGGCAAGGAAAGAGGCAGTAGTGCATCGCACC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATGGGCTAAGGGTTGCTaGTGTTCACTGGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTWAKGC*CSLGVE
Trigger: CTCTACACCCAGTGAACAGCAGCAACCCTTAGCCCA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTGGGCTAAGGGTTGCTaGTGTTCACTGGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKWAKGC*CSLGVE
Trigger: CTCTACACCCAGTGAACAGCAGCAACCCTTAGCCCA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATGCCAGGCTGGCCTGTaGAGACGCTTTTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTCQAGL*RRFSCL
Trigger: AAGACAAGAAAAGCGTCTGCACAGGCCAGCCTGGCA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTGCCAGGCTGGCCTGTaGAGACGCTTTTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKCQAGL*RRFSCL
Trigger: AAGACAAGAAAAGCGTCTGCACAGGCCAGCCTGGCA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp ATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACATTTGCTTTCTTCTGTTaGGCACCCCAATCCATATTG +
Preference number: 4 (lower is better)
Translates to: MPTQHTHASSTYPLRMFTFAFFC*APQSIL
Trigger: CAATATGGATTGGGGTGCCCAACAGAAGAAAGCAAA...TGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp ATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTTCAGATGGATTGAGGTaGCCTTCGTTTTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: IMPTQHTHASSTYPLRMFSDGLR*PSFSLS
Trigger: TGAGAGTGAAAACGAAGGCCACCTCAATCCATCTGA...AAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCTTCAGTGTTAGCCTaGAGGGAAGTCTGGACATCC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKASVLA*REVWTS
Trigger: GGATGTCCAGACTTCCCTCCAGGCTAACACTGAAGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp ATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACACAGTTTGGTAAATCCTaGTCATTCATGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: MPTQHTHASSTYPLRMFTQFGKS*SFMPSS
Trigger: TGAAGATGGCATGAATGATCAGGATTTACCAAACTG...TGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp TCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCCCTTCCAACTCCTGGTaGCGACTCCGGAGAAATATC +
Preference number: 4 (lower is better)
Translates to: SVHRNYVTSHLLDNSNYAPSNSW*RLRRNI
Trigger: GATATTTCTCCGGAGTCGTCACCAGGAGTTGGAAGG...GGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGAAGCAGAGGGAGCTaGAGTACTTCTCTGATCGAC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKRSRGS*STSLID
Trigger: GTCGATCAGAGAAGTACTTCAGCTCCCTCTGCTTCT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAGAAGCAGAGGGAGCTaGAGTACTTCTCTGATCGAC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTRSRGS*STSLID
Trigger: GTCGATCAGAGAAGTACTTCAGCTCCCTCTGCTTCT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGACCTTGCCTCCTCTaGTGTTCAGCCATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLRPCLL*CSAIRA
Trigger: AGCTCTGATGGCTGAACATCAGAGGAGGCAAGGTCT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCCATCACTTCTCAATaGCACAGCCACTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSITSQ*HSHWRC
Trigger: GCATCTCCAGTGGCTGTGTCATTGAGAAGTGATGGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCCATCACTTCTCAATaGCACAGCCACTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSITSQ*HSHWRC
Trigger: GCATCTCCAGTGGCTGTGTCATTGAGAAGTGATGGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACACTGTAAGGACCCGTaGGAAGAGTTTGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTHCKDP*EEFVAD
Trigger: GTCTGCTACAAACTCTTCTCACGGGTCCTTACAGTG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATGCCGGTCCAGCTGCTaGGTATCAATTCTAGGACAT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTCRSSC*VSILGH
Trigger: ATGTCCTAGAATTGATACTCAGCAGCTGGACCGGCA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTGCCGGTCCAGCTGCTaGGTATCAATTCTAGGACAT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKCRSSC*VSILGH
Trigger: ATGTCCTAGAATTGATACTCAGCAGCTGGACCGGCA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATCAACAGTAGGAGGTaGCTCCTTATGGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKINSRR*LLMGST
Trigger: AGTGCTGCCCATAAGGAGTCACCTCCTACTGTTGAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTTGCAGCTCAGAAACTaGTCCTTTCCCGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLQLRN*SFPAPH
Trigger: GTGTGGAGCGGGAAAGGAGCAGTTTCTGAGCTGCAA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000519253.5
CDS-3UTR GCA 90 bp GAAAGTAACATCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCTTGCAGCTCAGAAACTaGTCCTTTCCCGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: ESNISSQKLCYITSLRQLLQLRN*SFPAPH
Trigger: GTGTGGAGCGGGAAAGGAGCAGTTTCTGAGCTGCAA...GAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGATGTTACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp ATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTAATCCTGATCATTCATaGCATCTTCAAAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: IMPTQHTHASSTYPLRMFNPDHS*HLQRDL
Trigger: GAGGTCCCTTTGAAGATGGCATGAATGATCAGGATT...AAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp ATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTGAATTTGAACAAGCCTaGTTACAATCTGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IMPTQHTHASSTYPLRMFEFEQA*LQSGCS
Trigger: AGAGCAGCCAGATTGTAAGCAGGCTTGTTCAAATTC...AAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCCATTGACAACCGGTaGCAAGCCTACAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSIDNR*QAYRSR
Trigger: TCTGCTTCTGTAGGCTTGGCACCGGTTGTCAATGGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAGAAGGAGGGTGCGATaGACTACTGCCTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTRRRVR*TTASFL
Trigger: AAGGAAAGAGGCAGTAGTGCATCGCACCCTCCTTCT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGAAGGAGGGTGCGATaGACTACTGCCTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKRRRVR*TTASFL
Trigger: AAGGAAAGAGGCAGTAGTGCATCGCACCCTCCTTCT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTGGGCTAAGGGTTGCTaGTGTTCACTGGGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLWAKGC*CSLGVE
Trigger: CTCTACACCCAGTGAACAGCAGCAACCCTTAGCCCA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATTCTGGGCTAAGGGTTaGTGCTGTTCACTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTFWAKG*CCSLGV
Trigger: TACACCCAGTGAACAGCAGCAACCCTTAGCCCAGAA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACCATGGTGTCCTACTaGTTTCCACCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKTMVSY*FPPPLQ
Trigger: CTGAAGAGGAGGTGGAAAGCAGTAGGACACCATGGT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAACCATGGTGTCCTACTaGTTTCCACCTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTTMVSY*FPPPLQ
Trigger: CTGAAGAGGAGGTGGAAAGCAGTAGGACACCATGGT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp ATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTCATGTATCTACTGTGTaGGAACGTATGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: IMPTQHTHASSTYPLRMFHVSTV*ERMWSL
Trigger: AAGACTCCACATACGTTCCCACACAGTAGATACATG...AAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAGCCTGCTTACAATCTaGCTGCTCTCCATTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSLLTI*LLSIAG
Trigger: ACCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCCTCCAGGTTTTTCTaGATGCTGATTTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKASRFF*MLILLA
Trigger: CGCCAGCAAAATCAGCATCCAGAAAAACCTGGAGGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCCTCCAGGTTTTTCTaGATGCTGATTTTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTASRFF*MLILLA
Trigger: CGCCAGCAAAATCAGCATCCAGAAAAACCTGGAGGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGCTTCAGTGTTAGCCTaGAGGGAAGTCTGGACATCC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLASVLA*REVWTS
Trigger: GGATGTCCAGACTTCCCTCCAGGCTAACACTGAAGC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCAGAAGCAGAGGGAGCTaGAGTACTTCTCTGATCGAC +
Preference number: 4 (lower is better)
Translates to: SVHRNYVTSHLLDNSNYARSRGS*STSLID
Trigger: GTCGATCAGAGAAGTACTTCAGCTCCCTCTGCTTCT...GGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGAAGCAGAGGGAGCTaGAGTACTTCTCTGATCGAC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLRSRGS*STSLID
Trigger: GTCGATCAGAGAAGTACTTCAGCTCCCTCTGCTTCT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTATTGGATTCTCCATTaGCAACCGGTGCCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKYWILH*QPVPSL
Trigger: TAGGCTTGGCACCGGTTGTCAATGGAGAATCCAATA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCACCTTGTGCAACATaGATCTCCTGTTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSPCAT*ISCSPS
Trigger: AGAAGGGGAACAGGAGATTCATGTTGCACAAGGTGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATAATGAAGCTCCACTaGCTCCCTCCTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKIMKLH*LPPLLL
Trigger: AAGCAGAAGAGGAGGGAGTCAGTGGAGCTTCATTAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCCATCACTTCTCAATaGCACAGCCACTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSITSQ*HSHWRC
Trigger: GCATCTCCAGTGGCTGTGTCATTGAGAAGTGATGGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTTGCCGTTGCATGCTaGTATTCTGTTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLAVAC*YSVALS
Trigger: AGACAAGGCAACAGAATATCAGCATGCAACGGCAAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTTGCCGTTGCATGCTaGTATTCTGTTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLAVAC*YSVALS
Trigger: AGACAAGGCAACAGAATATCAGCATGCAACGGCAAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTACGTAAGAGAGCTCTaGCACCCAACGAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKYVREL*HPTKVF
Trigger: GAAAACCTTCGTTGGGTGTCAGAGCTCTCTTACGTA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATACGTAAGAGAGCTCTaGCACCCAACGAAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTYVREL*HPTKVF
Trigger: GAAAACCTTCGTTGGGTGTCAGAGCTCTCTTACGTA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCACTGTAAGGACCCGTaGGAAGAGTTTGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLHCKDP*EEFVAD
Trigger: GTCTGCTACAAACTCTTCTCACGGGTCCTTACAGTG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATGCTTACAATCTGGCTaGTCTCCATTGCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTCLQSG*SPLQVL
Trigger: GAGAACCTGCAATGGAGAGCAGCCAGATTGTAAGCA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp AATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTGTAGAGCTCTTAGTTaGTCCTGCTGTTGTAACATT +
Preference number: 4 (lower is better)
Translates to: NYAHTTHTRLFYLSLKNVCRALS*SCCCNI
Trigger: AATGTTACAACAGCAGGAGCAACTAAGAGCTCTACA...AACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp AATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTAGAATCATCCATCACTaGAATAGCTTGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: NYAHTTHTRLFYLSLKNVRIIHH*NSLLCF
Trigger: AAAGCAGAGCAAGCTATTGCAGTGATGGATGATTCT...AACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp GAAAGTAACATCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCTCCATTGACAACCGGTaGCAAGCCTACAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ESNISSQKLCYITSLRQLSIDNR*QAYRSR
Trigger: TCTGCTTCTGTAGGCTTGGCACCGGTTGTCAATGGA...GAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGATGTTACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCAGCATCTTCTGGATaGTCATCAACCAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSASSG*SSTRLL
Trigger: GAGCAGTCTGGTTGATGAGCATCCAGAAGATGCTGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATCAGAGCTTCAAGCTaGTTTCTTCTCTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKIRASS*FLLCRS
Trigger: GCTGCGACAGAGAAGAAAGCAGCTTGAAGCTCTGAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTTCTGGGCTAAGGGTTaGTGCTGTTCACTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLFWAKG*CCSLGV
Trigger: TACACCCAGTGAACAGCAGCAACCCTTAGCCCAGAA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGTGTGGGAACGTATGTaGAGTCTTTGTTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKVWERM*SLCSSP
Trigger: AGGCGAAGAACAAAGACTCCACATACGTTCCCACAC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGCCTGCTTACAATCTaGCTGCTCTCCATTGCAGGT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSLLTI*LLSIAG
Trigger: ACCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATTGTCTGGAACAGCTaGAGGCTGAGAATCACGAAG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKIVWNS*RLRITK
Trigger: CTTCGTGATTCTCAGCCTCCAGCTGTTCCAGACAAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAATTGTCTGGAACAGCTaGAGGCTGAGAATCACGAAG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTIVWNS*RLRITK
Trigger: CTTCGTGATTCTCAGCCTCCAGCTGTTCCAGACAAT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAACAGGCTCTTCAGTCTaGGCTGAATGTCTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTTGSSV*AECLFL
Trigger: TAGGAACAGACATTCAGCCCAGACTGAAGAGCCTGT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCTCATATACTCTaGGCTCCCACCGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKTSHIL*APTVSG
Trigger: ACCTGAAACGGTGGGAGCCCAGAGTATATGAGATGT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAACATCTCATATACTCTaGGCTCCCACCGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTTSHIL*APTVSG
Trigger: ACCTGAAACGGTGGGAGCCCAGAGTATATGAGATGT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCTGGGACAGACATCTaGCTCATGTATCTACTGTGT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSGTDI*LMYLLC
Trigger: ACACAGTAGATACATGAGTCAGATGTCTGTCCCAGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCTGGGACAGACATCTaGCTCATGTATCTACTGTGT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSGTDI*LMYLLC
Trigger: ACACAGTAGATACATGAGTCAGATGTCTGTCCCAGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp AATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTCTGATCTAAATCACTaGAGTTTATCCGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: NYAHTTHTRLFYLSLKNVSDLNH*SLSAVS
Trigger: TGAAACAGCGGATAAACTTCAGTGATTTAGATCAGA...AACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCGGTTTTCACTAAGCTaGCGTTTGTTGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKRFSLS*RLLLAA
Trigger: AGCTGCTAACAACAAACGTCAGCTTAGTGAAAACCG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACGGTTTTCACTAAGCTaGCGTTTGTTGTTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTRFSLS*RLLLAA
Trigger: AGCTGCTAACAACAAACGTCAGCTTAGTGAAAACCG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTATTGGATTCTCCATTaGCAACCGGTGCCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLYWILH*QPVPSL
Trigger: TAGGCTTGGCACCGGTTGTCAATGGAGAATCCAATA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCACCTTGTGCAACATaGATCTCCTGTTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSPCAT*ISCSPS
Trigger: AGAAGGGGAACAGGAGATTCATGTTGCACAAGGTGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATAATGAAGCTCCACTaGCTCCCTCCTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLIMKLH*LPPLLL
Trigger: AAGCAGAAGAGGAGGGAGTCAGTGGAGCTTCATTAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGTACTGGTCTCGTGTTaGTTAACAGTTGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKVLVSC*LTVGVE
Trigger: TTCAACCCCAACTGTTAATCAACACGAGACCAGTAC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCTAAAGCTTTCCAGTaGTTCTTCATCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAKAFQ*FFIKLA
Trigger: CGCCAGTTTGATGAAGAATCACTGGAAAGCTTTAGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCTAAAGCTTTCCAGTaGTTCTTCATCAAACTGGCG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTAKAFQ*FFIKLA
Trigger: CGCCAGTTTGATGAAGAATCACTGGAAAGCTTTAGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTCTTCAGTCTGGGCTaGATGTCTGTTCCTACTTTT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLFSLG*MSVPTF
Trigger: AAAAGTAGGAACAGACATTCAGCCCAGACTGAAGAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTCTTCAGTCTGGGCTaGATGTCTGTTCCTACTTTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLFSLG*MSVPTF
Trigger: AAAAGTAGGAACAGACATTCAGCCCAGACTGAAGAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTGAATACTTTTGCTTaGACAGGCTCTTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLNTFA*TGSSVW
Trigger: CCAGACTGAAGAGCCTGTTCAAGCAAAAGTATTCAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTGAATACTTTTGCTTaGACAGGCTCTTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLNTFA*TGSSVW
Trigger: CCAGACTGAAGAGCCTGTTCAAGCAAAAGTATTCAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAATCTCTCCAGCAGGTaGGCCATGATCTTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTNLSSR*AMIFKN
Trigger: ATTCTTGAAGATCATGGCTCACCTGCTGGAGAGATT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAATCTCTCCAGCAGGTaGGCCATGATCTTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKNLSSR*AMIFKN
Trigger: ATTCTTGAAGATCATGGCTCACCTGCTGGAGAGATT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGTTGTTAGCAGCTGTTaGTCTACCTTGGGAATCACT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTVVSSC*STLGIT
Trigger: AGTGATTCCCAAGGTAGAGCAACAGCTGCTAACAAC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTGCTTACAATCTGGCTaGTCTCCATTGCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLCLQSG*SPLQVL
Trigger: GAGAACCTGCAATGGAGAGCAGCCAGATTGTAAGCA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp AGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCCATGCTTACAATCTGGCTaGTCTCCATTGCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SSQKLCYITSLRQLKLCPCLQSG*SPLQVL
Trigger: GAGAACCTGCAATGGAGAGCAGCCAGATTGTAAGCA...TGGGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCAGCATCTTCTGGATaGTCATCAACCAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSASSG*SSTRLL
Trigger: GAGCAGTCTGGTTGATGAGCATCCAGAAGATGCTGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATCAGAGCTTCAAGCTaGTTTCTTCTCTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLIRASS*FLLCRS
Trigger: GCTGCGACAGAGAAGAAAGCAGCTTGAAGCTCTGAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGTGTACTTGAGGAGATaGAACATTGCTGGGCATAAC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTVYLRR*NIAGHN
Trigger: GTTATGCCCAGCAATGTTGCATCTCCTCAAGTACAC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATACTGCCTCTTTCCTTaGCTCCAGGTTTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTYCLFP*LQVFLD
Trigger: ATCCAGAAAAACCTGGAGGCAAGGAAAGAGGCAGTA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGTTTTATCTTTAGATaGCAGGCTGGCCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSFIFR*QAGLCR
Trigger: TCTGCACAGGCCAGCCTGGCATCTAAAGATAAAACT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAGTTTTATCTTTAGATaGCAGGCTGGCCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSFIFR*QAGLCR
Trigger: TCTGCACAGGCCAGCCTGGCATCTAAAGATAAAACT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATTAACTGTAGTACCTaGACCAGCACCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKINCST*TSTISI
Trigger: GATGGAGATGGTGCTGGTGCAGGTACTACAGTTAAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAACTGAAGTTAGAAGCTaGGAGGAGCATACTTCATCC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTTEVRS*EEHTSS
Trigger: GGATGAAGTATGCTCCTCGCAGCTTCTAACTTCAGT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACTGAAGTTAGAAGCTaGGAGGAGCATACTTCATCC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKTEVRS*EEHTSS
Trigger: GGATGAAGTATGCTCCTCGCAGCTTCTAACTTCAGT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAATAACGGGAGTTTCTaGACCAGCACCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLNNGSF*TSTISI
Trigger: GATGGAGATGGTGCTGGTGCAGAAACTCCCGTTATT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519253.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTGGCGCTTCATTGCATaGATTTCTGTTAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKWRFIA*ISVRLL
Trigger: CAGCAGTCTAACAGAAATGCATGCAATGAAGCGCCA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522275.5
CDS-3UTR CCA 90 bp GAAAGTAACATCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCGTGTGGGAACGTATGTaGAGTCTTTGTTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: ESNISSQKLCYITSLRQLVWERM*SLCSSP
Trigger: AGGCGAAGAACAAAGACTCCACATACGTTCCCACAC...GAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGATGTTACTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCTGTTGCTCTACCTTaGGAATCACTTCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAVALP*ESLPML
Trigger: AAGCATTGGAAGTGATTCCCAAGGTAGAGCAACAGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCTGTTGCTCTACCTTaGGAATCACTTCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTAVALP*ESLPML
Trigger: AAGCATTGGAAGTGATTCCCAAGGTAGAGCAACAGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATTGTCTGGAACAGCTaGAGGCTGAGAATCACGAAG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLIVWNS*RLRITK
Trigger: CTTCGTGATTCTCAGCCTCCAGCTGTTCCAGACAAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGATGGTTTCCTGCTCTaGGAAACCTCCCTAGTTAAT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKDGFLL*ETSLVN
Trigger: ATTAACTAGGGAGGTTTCCCAGAGCAGGAAACCATC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCAGATGGATTGAGGTaGCCTTCGTTTTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSDGLR*PSFSLS
Trigger: TGAGAGTGAAAACGAAGGCCACCTCAATCCATCTGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCAGATGGATTGAGGTaGCCTTCGTTTTCACTCTCA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSDGLR*PSFSLS
Trigger: TGAGAGTGAAAACGAAGGCCACCTCAATCCATCTGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTGGAGTTTTTCAGATaGATTGAGGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLEFFR*IEVAFV
Trigger: AACGAAGGCCACCTCAATCCATCTGAAAAACTCCAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTGGAGTTTTTCAGATaGATTGAGGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLEFFR*IEVAFV
Trigger: AACGAAGGCCACCTCAATCCATCTGAAAAACTCCAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTTTCCTGAAGAATTCTaGGCTAAGGGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKFPEEF*AKGCCC
Trigger: ACAGCAGCAACCCTTAGCCCAGAATTCTTCAGGAAA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATTTCCTGAAGAATTCTaGGCTAAGGGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTFPEEF*AKGCCC
Trigger: ACAGCAGCAACCCTTAGCCCAGAATTCTTCAGGAAA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGACAGGCTCTTCAGTCTaGGCTGAATGTCTGTTCCTA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLTGSSV*AECLFL
Trigger: TAGGAACAGACATTCAGCCCAGACTGAAGAGCCTGT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGGCTTCTCGTTCCAATaGGACATTTTTGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKGFSFQ*DIFAFC
Trigger: GCAGAAAGCAAAAATGTCCCATTGGAACGAGAAGCC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGGCTTCTCGTTCCAATaGGACATTTTTGCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTGFSFQ*DIFAFC
Trigger: GCAGAAAGCAAAAATGTCCCATTGGAACGAGAAGCC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGGAGGTGACTCCTTATaGGCAGCACTATTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKGGDSL*AALFKG
Trigger: ACCTTTAAATAGTGCTGCCCATAAGGAGTCACCTCC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGACATCTCATATACTCTaGGCTCCCACCGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLTSHIL*APTVSG
Trigger: ACCTGAAACGGTGGGAGCCCAGAGTATATGAGATGT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATCACTCCCAGTTTCTaGCGCTTCATTGCATGCATT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKITPSF*RFIACI
Trigger: AATGCATGCAATGAAGCGCCAGAAACTGGGAGTGAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522275.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTCTTTACACTGTGCTaGTCCAATCGTTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLFTLC*SNRFSV
Trigger: AACAGAGAAACGATTGGATCAGCACAGTGTAAAGAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAAGGAACAGATGATGTaGGGCTATTGGATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKKEQMM*GYWILH
Trigger: ATGGAGAATCCAATAGCCTCACATCATCTGTTCCTT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAAGGAACAGATGATGTaGGGCTATTGGATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTKEQMM*GYWILH
Trigger: ATGGAGAATCCAATAGCCTCACATCATCTGTTCCTT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGGATAAGGAACAGATaGTGTGAGGCTATTGGATTC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKRIRNR*CEAIGF
Trigger: GAATCCAATAGCCTCACATCATCTGTTCCTTATCCT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGTTTTTCAGATGGATTaGGGTGGCCTTCGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLVFQMD*GGLRFH
Trigger: GTGAAAACGAAGGCCACCTCAATCCATCTGAAAAAC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGTACTGGTCTCGTGTTaGTTAACAGTTGGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLVLVSC*LTVGVE
Trigger: TTCAACCCCAACTGTTAATCAACACGAGACCAGTAC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCTGTTCTACTTTGCTaGGGAGTACATAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSVLLC*GVHRFS
Trigger: TGAGAACCTATGTACTCCTCAGCAAAGTAGAACAGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCAACTGGTGCATTATaGAGTGTACTTGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSTGAL*SVLEEM
Trigger: CATCTCCTCAAGTACACTTCATAATGCACCAGTTGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGTTTTTCTGGATGCTaGTTTTGCTGGCGCATAAGT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGFSGC*FCWRIS
Trigger: ACTTATGCGCCAGCAAAATCAGCATCCAGAAAAACC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCTGTGTTGGAAAGCTaGAAGGACAAAATAAACTGG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAVLES*KDKINW
Trigger: CCAGTTTATTTTGTCCTTTCAGCTTTCCAACACAGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCTGTGTTGGAAAGCTaGAAGGACAAAATAAACTGG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTAVLES*KDKINW
Trigger: CCAGTTTATTTTGTCCTTTCAGCTTTCCAACACAGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAATCTCTCCAGCAGGTaGGCCATGATCTTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLNLSSR*AMIFKN
Trigger: ATTCTTGAAGATCATGGCTCACCTGCTGGAGAGATT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACATCTTCCAAGATATTaGGGTAACAGGGTTTCACAG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTHLPRY*GNRVSQ
Trigger: CTGTGAAACCCTGTTACCTCAATATCTTGGAAGATG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAAAGGGTTAGGCTGTTaGGTTGAATCAACAGTAGGA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTKGLGC*VESTVG
Trigger: TCCTACTGTTGATTCAACTCAACAGCCTAACCCTTT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAAAGGGTTAGGCTGTTaGGTTGAATCAACAGTAGGA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKKGLGC*VESTVG
Trigger: TCCTACTGTTGATTCAACTCAACAGCCTAACCCTTT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAATCCTGATCATTCATaGCATCTTCAAAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTNPDHS*HLQRDL
Trigger: GAGGTCCCTTTGAAGATGGCATGAATGATCAGGATT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAATCCTGATCATTCATaGCATCTTCAAAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKNPDHS*HLQRDL
Trigger: GAGGTCCCTTTGAAGATGGCATGAATGATCAGGATT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGTTGTTAGCAGCTGTTaGTCTACCTTGGGAATCACT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLVVSSC*STLGIT
Trigger: AGTGATTCCCAAGGTAGAGCAACAGCTGCTAACAAC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCTACCTGCAGTTTCTaGAACAACAGAATCATCCAT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTATCSF*NNRIIH
Trigger: ATGGATGATTCTGTTGTTGCAGAAACTGCAGGTAGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCTACCTGCAGTTTCTaGAACAACAGAATCATCCAT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKATCSF*NNRIIH
Trigger: ATGGATGATTCTGTTGTTGCAGAAACTGCAGGTAGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGATAACTCCTTGAGCTaGATCATCATCCTGTACCAT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTDNSLS*IIILYH
Trigger: ATGGTACAGGATGATGATGCAGCTCAAGGAGTTATC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGATAACTCCTTGAGCTaGATCATCATCCTGTACCAT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKDNSLS*IIILYH
Trigger: ATGGTACAGGATGATGATGCAGCTCAAGGAGTTATC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGGTTTTCTTGCCGTTaGATGCTGATATTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKRFSCR*MLIFCC
Trigger: GCAACAGAATATCAGCATGCAACGGCAAGAAAACCT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCAACGAAGGTTTTCTTaGCGTTGCATGCTGATATTC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKQRRFS*RCMLIF
Trigger: GAATATCAGCATGCAACGGCAAGAAAACCTTCGTTG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGTGTACTTGAGGAGATaGAACATTGCTGGGCATAAC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLVYLRR*NIAGHN
Trigger: GTTATGCCCAGCAATGTTGCATCTCCTCAAGTACAC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTACTGCCTCTTTCCTTaGCTCCAGGTTTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLYCLFP*LQVFLD
Trigger: ATCCAGAAAAACCTGGAGGCAAGGAAAGAGGCAGTA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAATTCCTTGGTTTCTCTaGTCCAATAGAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTIPWFL*SNRGTA
Trigger: AGCAGTTCCTCTATTGGAGCAGAGAAACCAAGGAAT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGTTTTATCTTTAGATaGCAGGCTGGCCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSFIFR*QAGLCR
Trigger: TCTGCACAGGCCAGCCTGGCATCTAAAGATAAAACT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCTGTGTTTAGTAGCTaGAGCTCATGGAAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSVFSS*SSWKSS
Trigger: TGAACTCTTCCATGAGCTGCAGCTACTAAACACAGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCTGTGTTTAGTAGCTaGAGCTCATGGAAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSVFSS*SSWKSS
Trigger: TGAACTCTTCCATGAGCTGCAGCTACTAAACACAGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTGGATACTATGTCCTaGAATGCATATAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLDTMS*NAYKAL
Trigger: GAGGGCTTTATATGCATTGCAGGACATAGTATCCAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTGGATACTATGTCCTaGAATGCATATAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLDTMS*NAYKAL
Trigger: GAGGGCTTTATATGCATTGCAGGACATAGTATCCAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATTAACTGTAGTACCTaGACCAGCACCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLINCST*TSTISI
Trigger: GATGGAGATGGTGCTGGTGCAGGTACTACAGTTAAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGACTGAAGTTAGAAGCTaGGAGGAGCATACTTCATCC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLTEVRS*EEHTSS
Trigger: GGATGAAGTATGCTCCTCGCAGCTTCTAACTTCAGT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATTGCTCTCATCATTTTaGTGGGTAAGGGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLLSSF*WVRVKT
Trigger: GGTTTTGACCCTTACCCAGCAAAATGATGAGAGCAA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp AGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCCACTATGTTTAGCGATGTaGTCTCAGCTACAGAACCAG +
Preference number: 4 (lower is better)
Translates to: SSQKLCYITSLRQLKLCPLCLAM*SQLQNQ
Trigger: CTGGTTCTGTAGCTGAGAGCACATCGCTAAACATAG...TGGGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTTTGCTTTCTTCTGTTaGGCACCCCAATCCATATTG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKFAFFC*APQSIL
Trigger: CAATATGGATTGGGGTGCCCAACAGAAGAAAGCAAA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACATGTATCTACTGTGTaGGAACGTATGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTHVSTV*ERMWSL
Trigger: AAGACTCCACATACGTTCCCACACAGTAGATACATG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCGCTGTTGCTCTACCTTaGGAATCACTTCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: SVHRNYVTSHLLDNSNYAAVALP*ESLPML
Trigger: AAGCATTGGAAGTGATTCCCAAGGTAGAGCAACAGC...GGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAATCGTTTCTCTGTTTaGGGGGTTTGTAGATGCATC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTNRFSV*GVCRCI
Trigger: GATGCATCTACAAACCCCCCAAACAGAGAAACGATT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCGATGGTTTCCTGCTCTaGGAAACCTCCCTAGTTAAT +
Preference number: 4 (lower is better)
Translates to: SVHRNYVTSHLLDNSNYADGFLL*ETSLVN
Trigger: ATTAACTAGGGAGGTTTCCCAGAGCAGGAAACCATC...GGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTCTCATCATTTTGCTaGGTAAGGGTCAAAACCATG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLSSFC*VRVKTM
Trigger: CATGGTTTTGACCCTTACCCAGCAAAATGATGAGAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTCTCATCATTTTGCTaGGTAAGGGTCAAAACCATG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLSSFC*VRVKTM
Trigger: CATGGTTTTGACCCTTACCCAGCAAAATGATGAGAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGAGGTGACTCCTTATaGGCAGCACTATTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGGDSL*AALFKG
Trigger: ACCTTTAAATAGTGCTGCCCATAAGGAGTCACCTCC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCAGTTTGGTAAATCCTaGTCATTCATGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKQFGKS*SFMPSS
Trigger: TGAAGATGGCATGAATGATCAGGATTTACCAAACTG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACAGTTTGGTAAATCCTaGTCATTCATGCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTQFGKS*SFMPSS
Trigger: TGAAGATGGCATGAATGATCAGGATTTACCAAACTG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCCCAATCCATATTGTTaGGCCTGTCATCAACATTCT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLPNPYC*ACHQHS
Trigger: AGAATGTTGATGACAGGCTCAACAATATGGATTGGG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCTCTTTACACTGTGCTaGTCCAATCGTTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLFTLC*SNRFSV
Trigger: AACAGAGAAACGATTGGATCAGCACAGTGTAAAGAG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp AGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCCACTCTTTACACTGTGCTaGTCCAATCGTTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSQKLCYITSLRQLKLCPLFTLC*SNRFSV
Trigger: AACAGAGAAACGATTGGATCAGCACAGTGTAAAGAG...TGGGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp GAAAGTAACATCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAGGAACAGATGATGTaGGGCTATTGGATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ESNISSQKLCYITSLRQLKEQMM*GYWILH
Trigger: ATGGAGAATCCAATAGCCTCACATCATCTGTTCCTT...GAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGATGTTACTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGGATAAGGAACAGATaGTGTGAGGCTATTGGATTC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLRIRNR*CEAIGF
Trigger: GAATCCAATAGCCTCACATCATCTGTTCCTTATCCT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp GAAAGTAACATCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAGGATAAGGAACAGATaGTGTGAGGCTATTGGATTC +
Preference number: 4 (lower is better)
Translates to: ESNISSQKLCYITSLRQLRIRNR*CEAIGF
Trigger: GAATCCAATAGCCTCACATCATCTGTTCCTTATCCT...GAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGATGTTACTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAATTATGAAGTGTACTTaGGGAGATGCAACATTGCTG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTIMKCT*GDATLL
Trigger: CAGCAATGTTGCATCTCCTCAAGTACACTTCATAAT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCAACTGGTGCATTATaGAGTGTACTTGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSTGAL*SVLEEM
Trigger: CATCTCCTCAAGTACACTTCATAATGCACCAGTTGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAAGGAAATAAAGGGCTaGAATTCATACCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKKEIKG*NSYLVQ
Trigger: TTGCACCAGGTATGAATTTCAGCCCTTTATTTCCTT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAAGGAAATAAAGGGCTaGAATTCATACCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTKEIKG*NSYLVQ
Trigger: TTGCACCAGGTATGAATTTCAGCCCTTTATTTCCTT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTACACCTCAGATGTTTaGGTCTGCTTAACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKYTSDV*VCLTVS
Trigger: TGAAACAGTTAAGCAGACTCAAACATCTGAGGTGTA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCATCTTCCAAGATATTaGGGTAACAGGGTTTCACAG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLHLPRY*GNRVSQ
Trigger: CTGTGAAACCCTGTTACCTCAATATCTTGGAAGATG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAAGGGTTAGGCTGTTaGGTTGAATCAACAGTAGGA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLKGLGC*VESTVG
Trigger: TCCTACTGTTGATTCAACTCAACAGCCTAACCCTTT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCTCCTAGCATGTGCTaGAGATATTTCTGTAGACCT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSPSMC*RYFCRP
Trigger: AGGTCTACAGAAATATCTTCAGCACATGCTAGGAGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522275.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGGGAATCACTTCCAATaGTTCTCTGATCTAAATCAC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTGNHFQ*FSDLNH
Trigger: GTGATTTAGATCAGAGAAGCATTGGAAGTGATTCCC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGAATTTGAACAAGCCTaGTTACAATCTGGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLEFEQA*LQSGCS
Trigger: AGAGCAGCCAGATTGTAAGCAGGCTTGTTCAAATTC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTGTAGAGCTCTTAGTTaGTCCTGCTGTTGTAACATT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKCRALS*SCCCNI
Trigger: AATGTTACAACAGCAGGAGCAACTAAGAGCTCTACA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATGTAGAGCTCTTAGTTaGTCCTGCTGTTGTAACATT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTCRALS*SCCCNI
Trigger: AATGTTACAACAGCAGGAGCAACTAAGAGCTCTACA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAATCACTGCAATAGCTTaGTCTGCTTTATGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTITAIA*SALCCR
Trigger: TCTGCAACATAAAGCAGAGCAAGCTATTGCAGTGAT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATCACTGCAATAGCTTaGTCTGCTTTATGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKITAIA*SALCCR
Trigger: TCTGCAACATAAAGCAGAGCAAGCTATTGCAGTGAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGAATCATCCATCACTaGAATAGCTTGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKRIIHH*NSLLCF
Trigger: AAAGCAGAGCAAGCTATTGCAGTGATGGATGATTCT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCGCTACCTGCAGTTTCTaGAACAACAGAATCATCCAT +
Preference number: 4 (lower is better)
Translates to: SVHRNYVTSHLLDNSNYAATCSF*NNRIIH
Trigger: ATGGATGATTCTGTTGTTGCAGAAACTGCAGGTAGC...GGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGGCTCGGAATTTTCATaGTCAGAATCATATTCTGAC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTGSEFS*SESYSD
Trigger: GTCAGAATATGATTCTGAGCATGAAAATTCCGAGCC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGGCTCGGAATTTTCATaGTCAGAATCATATTCTGAC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKGSEFS*SESYSD
Trigger: GTCAGAATATGATTCTGAGCATGAAAATTCCGAGCC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAATCATCTTCACCTTGTaGAACATGAATCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTIIFTL*NMNLLF
Trigger: GAACAGGAGATTCATGTTGCACAAGGTGAAGATGAT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATCATCTTCACCTTGTaGAACATGAATCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKIIFTL*NMNLLF
Trigger: GAACAGGAGATTCATGTTGCACAAGGTGAAGATGAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCATGCCGTTTGCAATaGTTGAATTTTCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTACRLQ*LNFLLN
Trigger: ATTCAGGAGAAAATTCAAGCATTGCAAACGGCATGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCATGCCGTTTGCAATaGTTGAATTTTCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKACRLQ*LNFLLN
Trigger: ATTCAGGAGAAAATTCAAGCATTGCAAACGGCATGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCTCAAAAACAGATTTaGTTGTACTGGTCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTAQKQI*LYWSRV
Trigger: AACACGAGACCAGTACAAGCAAATCTGTTTTTGAGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCTCAAAAACAGATTTaGTTGTACTGGTCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAQKQI*LYWSRV
Trigger: AACACGAGACCAGTACAAGCAAATCTGTTTTTGAGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAATGCTGATATTCTGTTaGCTTGTCTTGGCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTMLIFC*LVLAKG
Trigger: TCCTTTAGCCAAGACAAGGCAACAGAATATCAGCAT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGGTTTTCTTGCCGTTaGATGCTGATATTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLRFSCR*MLIFCC
Trigger: GCAACAGAATATCAGCATGCAACGGCAAGAAAACCT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCAACGAAGGTTTTCTTaGCGTTGCATGCTGATATTC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLQRRFS*RCMLIF
Trigger: GAATATCAGCATGCAACGGCAAGAAAACCTTCGTTG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATTCCTTGGTTTCTCTaGTCCAATAGAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLIPWFL*SNRGTA
Trigger: AGCAGTTCCTCTATTGGAGCAGAGAAACCAAGGAAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCTGCTGAATACTTTTaGTTGAACAGGCTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSAEYF*LNRLFS
Trigger: ACTGAAGAGCCTGTTCAAGCAAAAGTATTCAGCAGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCTGTGTTTAGTAGCTaGAGCTCATGGAAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSVFSS*SSWKSS
Trigger: TGAACTCTTCCATGAGCTGCAGCTACTAAACACAGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCTGGATACTATGTCCTaGAATGCATATAAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLDTMS*NAYKAL
Trigger: GAGGGCTTTATATGCATTGCAGGACATAGTATCCAG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTTGCTCTCATCATTTTaGTGGGTAAGGGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLLSSF*WVRVKT
Trigger: GGTTTTGACCCTTACCCAGCAAAATGATGAGAGCAA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp AGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCCAAGACAACTCAAATTATaGCCACACAACACACACACG +
Preference number: 4 (lower is better)
Translates to: SSQKLCYITSLRQLKLCPRQLKL*PHNTHT
Trigger: CGTGTGTGTGTTGTGTGGGCATAATTTGAGTTGTCT...TGGGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCATTTCTGTTAGACTaGTGTAGTATTCTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAFLLD*CSILLA
Trigger: TGCTAGGAGAATACTACAGCAGTCTAACAGAAATGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522275.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTTTGCTTTCTTCTGTTaGGCACCCCAATCCATATTG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLFAFFC*APQSIL
Trigger: CAATATGGATTGGGGTGCCCAACAGAAGAAAGCAAA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCATGTATCTACTGTGTaGGAACGTATGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLHVSTV*ERMWSL
Trigger: AAGACTCCACATACGTTCCCACACAGTAGATACATG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp AGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCCAAATCGTTTCTCTGTTTaGGGGGTTTGTAGATGCATC +
Preference number: 4 (lower is better)
Translates to: SSQKLCYITSLRQLKLCPNRFSV*GVCRCI
Trigger: GATGCATCTACAAACCCCCCAAACAGAGAAACGATT...TGGGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAATCGTTTCTCTGTTTaGGGGGTTTGTAGATGCATC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLNRFSV*GVCRCI
Trigger: GATGCATCTACAAACCCCCCAAACAGAGAAACGATT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAAATTCAGCATCTTCTaGATGCTCATCAACCAGACT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKKFSIF*MLINQT
Trigger: AGTCTGGTTGATGAGCATCCAGAAGATGCTGAATTT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAAATTCAGCATCTTCTaGATGCTCATCAACCAGACT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTKFSIF*MLINQT
Trigger: AGTCTGGTTGATGAGCATCCAGAAGATGCTGAATTT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATGTTGTTGGATCTACTaGATCAGGCATACTGCTAAA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTCCWIY*IRHTAK
Trigger: TTTAGCAGTATGCCTGATCCAGTAGATCCAACAACA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTTTAGTCACTGTTGTTaGATCTACTGGATCAGGCAT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKFSHCC*IYWIRH
Trigger: ATGCCTGATCCAGTAGATCCAACAACAGTGACTAAA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCTCTCATCATTTTGCTaGGTAAGGGTCAAAACCATG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLSSFC*VRVKTM
Trigger: CATGGTTTTGACCCTTACCCAGCAAAATGATGAGAG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCTGATCTAAATCACTaGAGTTTATCCGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSDLNH*SLSAVS
Trigger: TGAAACAGCGGATAAACTTCAGTGATTTAGATCAGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCTGATCTAAATCACTaGAGTTTATCCGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSDLNH*SLSAVS
Trigger: TGAAACAGCGGATAAACTTCAGTGATTTAGATCAGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCCTCTAGTGTTATTTaGATTTTGCTTGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSSSVI*ILLGVF
Trigger: GAAGACACCAAGCAAAATTCAAATAACACTAGAGGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCCTCTAGTGTTATTTaGATTTTGCTTGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSSSVI*ILLGVF
Trigger: GAAGACACCAAGCAAAATTCAAATAACACTAGAGGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATTAACAGTTGGGGTTaGAGTAACAGCTGGCATATA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLINSWG*SNSWHI
Trigger: TATATGCCAGCTGTTACTTCAACCCCAACTGTTAAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAATGTCTTCTCATTTCTaGCCACAACTCATTATCTAC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTMSSHF*PQLIIY
Trigger: GTAGATAATGAGTTGTGGTCAGAAATGAGAAGACAT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATGTCTTCTCATTTCTaGCCACAACTCATTATCTAC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKMSSHF*PQLIIY
Trigger: GTAGATAATGAGTTGTGGTCAGAAATGAGAAGACAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATTATGAAGTGTACTTaGGGAGATGCAACATTGCTG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLIMKCT*GDATLL
Trigger: CAGCAATGTTGCATCTCCTCAAGTACACTTCATAAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTACACCTCAGATGTTTaGGTCTGCTTAACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLYTSDV*VCLTVS
Trigger: TGAAACAGTTAAGCAGACTCAAACATCTGAGGTGTA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCCAGAATTCAGTTTCTaGTGTTTTAAACTACCATGG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKPEFSF*CFKLPW
Trigger: CCATGGTAGTTTAAAACATCAGAAACTGAATTCTGG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000524226.5
CDS-3UTR GCA 90 bp GAAAGTAACATCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCGGGAATCACTTCCAATaGTTCTCTGATCTAAATCAC +
Preference number: 4 (lower is better)
Translates to: ESNISSQKLCYITSLRQLGNHFQ*FSDLNH
Trigger: GTGATTTAGATCAGAGAAGCATTGGAAGTGATTCCC...GAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGATGTTACTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGGAATCACTTCCAATaGTTCTCTGATCTAAATCAC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGNHFQ*FSDLNH
Trigger: GTGATTTAGATCAGAGAAGCATTGGAAGTGATTCCC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTGTAGAGCTCTTAGTTaGTCCTGCTGTTGTAACATT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLCRALS*SCCCNI
Trigger: AATGTTACAACAGCAGGAGCAACTAAGAGCTCTACA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp GAAAGTAACATCAGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCATCACTGCAATAGCTTaGTCTGCTTTATGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: ESNISSQKLCYITSLRQLITAIA*SALCCR
Trigger: TCTGCAACATAAAGCAGAGCAAGCTATTGCAGTGAT...GAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACTGATGTTACTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGCTCGGAATTTTCATaGTCAGAATCATATTCTGAC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGSEFS*SESYSD
Trigger: GTCAGAATATGATTCTGAGCATGAAAATTCCGAGCC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCTAAGTTTCTGTTTTaGAGCCATAAGTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSKFLF*SHKSVD
Trigger: ATCAACCGACTTATGGCTGCAAAACAGAAACTTAGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCTAAGTTTCTGTTTTaGAGCCATAAGTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSKFLF*SHKSVD
Trigger: ATCAACCGACTTATGGCTGCAAAACAGAAACTTAGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGCATGCCGTTTGCAATaGTTGAATTTTCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLACRLQ*LNFLLN
Trigger: ATTCAGGAGAAAATTCAAGCATTGCAAACGGCATGC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATGCTGATATTCTGTTaGCTTGTCTTGGCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLMLIFC*LVLAKG
Trigger: TCCTTTAGCCAAGACAAGGCAACAGAATATCAGCAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCTGCTGAATACTTTTaGTTGAACAGGCTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSAEYF*LNRLFS
Trigger: ACTGAAGAGCCTGTTCAAGCAAAAGTATTCAGCAGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGACTTCTTTCATAATTaGTTTAATTTGCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKDFFHN*FNLPVQ
Trigger: CTGGACCGGCAAATTAAAGCAATTATGAAAGAAGTC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGACTTCTTTCATAATTaGTTTAATTTGCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTDFFHN*FNLPVQ
Trigger: CTGGACCGGCAAATTAAAGCAATTATGAAAGAAGTC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCTAATTCTTCGGTCTaGATTTCACATATTTCACCA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTANSSV*ISHISP
Trigger: TGGTGAAATATGTGAAATGCAGACCGAAGAATTAGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAGTGGAAGCTACTTGTaGATTTCGAATGTTAGTAAC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSGSYL*ISNVSN
Trigger: GTTACTAACATTCGAAATCCACAAGTAGCTTCCACT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTTACTTCATTCCAAGTaGAAGCTACTTGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLLHSK*KLLVDF
Trigger: GAAATCCACAAGTAGCTTCCACTTGGAATGAAGTAA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAATTCAGCATCTTCTaGATGCTCATCAACCAGACT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLKFSIF*MLINQT
Trigger: AGTCTGGTTGATGAGCATCCAGAAGATGCTGAATTT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATATTTGAATTTTGCTTaGTGTCTTCTTCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTYLNFA*CLLLLG
Trigger: ACCCAGCAGAAGAAGACACCAAGCAAAATTCAAATA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTATTTGAATTTTGCTTaGTGTCTTCTTCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKYLNFA*CLLLLG
Trigger: ACCCAGCAGAAGAAGACACCAAGCAAAATTCAAATA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCTGTTGCCTTGTCTTaGCTAAAGGACGATAATTTT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSVALS*LKDDNF
Trigger: AAAATTATCGTCCTTTAGCCAAGACAAGGCAACAGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTGTTGTTGGATCTACTaGATCAGGCATACTGCTAAA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLCCWIY*IRHTAK
Trigger: TTTAGCAGTATGCCTGATCCAGTAGATCCAACAACA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTTTAGTCACTGTTGTTaGATCTACTGGATCAGGCAT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLFSHCC*IYWIRH
Trigger: ATGCCTGATCCAGTAGATCCAACAACAGTGACTAAA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAGTAGCTGCAGCTCATaGAAGAGTTCAATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSSCSS*KSSIRK
Trigger: TTTTCTTATTGAACTCTTCCATGAGCTGCAGCTACT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGTAGCTGCAGCTCATaGAAGAGTTCAATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSSCSS*KSSIRK
Trigger: TTTTCTTATTGAACTCTTCCATGAGCTGCAGCTACT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCTCAGAAATATGTCTaGATACTATGTCCTGCAATG +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSQKYV*ILCPAM
Trigger: CATTGCAGGACATAGTATCCAGACATATTTCTGAGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCTCAGAAATATGTCTaGATACTATGTCCTGCAATG +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSQKYV*ILCPAM
Trigger: CATTGCAGGACATAGTATCCAGACATATTTCTGAGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATCAATTCTAGGACATaGGATGGTAGAAACTTCACT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKINSRT*DGRNFT
Trigger: AGTGAAGTTTCTACCATCCCATGTCCTAGAATTGAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAATCAATTCTAGGACATaGGATGGTAGAAACTTCACT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTINSRT*DGRNFT
Trigger: AGTGAAGTTTCTACCATCCCATGTCCTAGAATTGAT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCCTCTAGTGTTATTTaGATTTTGCTTGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSSSVI*ILLGVF
Trigger: GAAGACACCAAGCAAAATTCAAATAACACTAGAGGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATGTCTTCTCATTTCTaGCCACAACTCATTATCTAC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLMSSHF*PQLIIY
Trigger: GTAGATAATGAGTTGTGGTCAGAAATGAGAAGACAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR TCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCCAGAATTCAGTTTCTaGTGTTTTAAACTACCATGG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLPEFSF*CFKLPW
Trigger: CCATGGTAGTTTAAAACATCAGAAACTGAATTCTGG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTTAGAAACTAGTTTTTaGAGCTCAGAAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLETSF*SSETAP
Trigger: AGGAGCAGTTTCTGAGCTGCAAAAACTAGTTTCTAA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325083.12
ENST00000519253.5
CDS-3UTR GCA 90 bp AGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCCATTAGAAACTAGTTTTTaGAGCTCAGAAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSQKLCYITSLRQLKLCPLETSF*SSETAP
Trigger: AGGAGCAGTTTCTGAGCTGCAAAAACTAGTTTCTAA...TGGGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCTAAGTTTCTGTTTTaGAGCCATAAGTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSKFLF*SHKSVD
Trigger: ATCAACCGACTTATGGCTGCAAAACAGAAACTTAGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATTGTATCACTCCAGTTaGTTCTATTTTCCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLYHSS*FYFPFA
Trigger: TGCAAAAGGAAAATAGAAGCAACTGGAGTGATACAA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTTGTATCACTCCAGTTaGTTCTATTTTCCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLYHSS*FYFPFA
Trigger: TGCAAAAGGAAAATAGAAGCAACTGGAGTGATACAA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGCTAATTCTTCGGTCTaGATTTCACATATTTCACCA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLANSSV*ISHISP
Trigger: TGGTGAAATATGTGAAATGCAGACCGAAGAATTAGC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATATATTACCAGATTCTaGTTCCTGTTCATCATGTTC +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTYITRF*FLFIMF
Trigger: GAACATGATGAACAGGAAGCAGAATCTGGTAATATA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGTGGAAGCTACTTGTaGATTTCGAATGTTAGTAAC +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSGSYL*ISNVSN
Trigger: GTTACTAACATTCGAAATCCACAAGTAGCTTCCACT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTATTTGAATTTTGCTTaGTGTCTTCTTCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLYLNFA*CLLLLG
Trigger: ACCCAGCAGAAGAAGACACCAAGCAAAATTCAAATA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGTAGCTGCAGCTCATaGAAGAGTTCAATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSSCSS*KSSIRK
Trigger: TTTTCTTATTGAACTCTTCCATGAGCTGCAGCTACT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCATATTCTCTCATTCTaGCTAATGCTTGATCTAAGT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKHILSF*LMLDLS
Trigger: ACTTAGATCAAGCATTAGCCAGAATGAGAGAATATG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACATATTCTCTCATTCTaGCTAATGCTTGATCTAAGT +
Preference number: 4 (lower is better)
Translates to: FHICIEYVRTELDEPLKTHILSF*LMLDLS
Trigger: ACTTAGATCAAGCATTAGCCAGAATGAGAGAATATG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGGACAGTTATTTTaGTCATTTTTACTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: CFHICIEYVRTELDEPLKTGQLF*SFLLVA
Trigger: AGCCACTAGTAAAAATGACCAAAATAACTGTCCTGT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTTGTATCACTCCAGTTaGTTCTATTTTCCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLYHSS*FYFPFA
Trigger: TGCAAAAGGAAAATAGAAGCAACTGGAGTGATACAA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR GCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGCACTATTTAAAGGTTaGTCATCTTCCAAGATATTG +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLALFKG*SSSKIL
Trigger: CAATATCTTGGAAGATGAGCAACCTTTAAATAGTGC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCATATTCTCTCATTCTaGCTAATGCTTGATCTAAGT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLHILSF*LMLDLS
Trigger: ACTTAGATCAAGCATTAGCCAGAATGAGAGAATATG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CCA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGACAGGACAGTTATTTTaGTCATTTTTACTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: YCFHICIEYVRTELDEPLTGQLF*SFLLVA
Trigger: AGCCACTAGTAAAAATGACCAAAATAACTGTCCTGT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS CCA 90 bp GCGGTCGGCCCTCGGAGACCGCAGCAGAGAGGCCCACACGTTTCCTaGCTGCCTCGGCCCCAGTGGCCGCCTTTTCGACCTCAGCTACGC +
Preference number: 5 (lower is better)
Translates to: AVGPRRPQQRGPHVS*LPRPQWPPFRPQLR
Trigger: GCGTAGCTGAGGTCGAAAAGGCGGCCACTGGGGCCGAGGCAGCCAGGAAACGTGTGGGCCTCTCTGCTGCGGTCTCCGAGGGCCGACCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325083.12
ENST00000517545.5
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000518936.5
ENST00000519253.5
ENST00000523055.5
CDS GCA 90 bp TCGGCCCTCGGAGACCGCAGCAGAGAGGCCCACACGTTTCCTGGCTaGCTCGGCCCCAGTGGCCGCCTTTTCGACCTCAGCTACGCAGCG +
Preference number: 5 (lower is better)
Translates to: SALGDRSREAHTFPG*LGPSGRLFDLSYAA
Trigger: CGCTGCGTAGCTGAGGTCGAAAAGGCGGCCACTGGGGCCGAGGCAGCCAGGAAACGTGTGGGCCTCTCTGCTGCGGTCTCCGAGGGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517545.5
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000518936.5
ENST00000523055.5
CDS TCA 90 bp CGGCAGGCCAAAGCAGCACGCCGAAAAGCAGAGCAAACAGGGCGGTaGACCCAGAAAGTTTGTTTACTAAGCAGAGAGGATCCTCAGTCA +
Preference number: 5 (lower is better)
Translates to: RQAKAARRKAEQTGR*TQKVCLLSREDPQS
Trigger: TGACTGAGGATCCTCTCTGCTTAGTAAACAAACTTTCTGGGTTCACCGCCCTGTTTGCTCTGCTTTTCGGCGTGCTGCTTTGGCCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS GCA 90 bp CCTGCAGTTTCTGCAACAACAGAATCATCCATCACTGCAATAGCTTaGTCTGCTTTATGTTGCAGAGCTAGAAGTGCAGCCTGCCGTCCC +
Preference number: 5 (lower is better)
Translates to: PAVSATTESSITAIA*SALCCRARSAACRP
Trigger: GGGACGGCAGGCTGCACTTCTAGCTCTGCAACATAAAGCAGAGCAAGCTATTGCAGTGATGGATGATTCTGTTGTTGCAGAAACTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 90 bp ACCGGTGCCAAGCCTACAGAAGCAGAGGGAGCTGAAGTACTTCTCTaGTCGACACTCCTTTGTGGAGAGGATGATGAATTGTTAAGATGC +
Preference number: 5 (lower is better)
Translates to: TGAKPTEAEGAEVLL*STLLCGEDDELLRC
Trigger: GCATCTTAACAATTCATCATCCTCTCCACAAAGGAGTGTCGATCAGAGAAGTACTTCAGCTCCCTCTGCTTCTGTAGGCTTGGCACCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000524226.5
CDS GCA 90 bp GCAATAGCTTGCTCTGCTTTATGTTGCAGAGCTAGAAGTGCAGCCTaGCGTCCCTGTAGAGCTCTTAGTTGCTCCTGCTGTTGTAACATT +
Preference number: 5 (lower is better)
Translates to: AIACSALCCRARSAA*RPCRALSCSCCCNI
Trigger: AATGTTACAACAGCAGGAGCAACTAAGAGCTCTACAGGGACGGCAGGCTGCACTTCTAGCTCTGCAACATAAAGCAGAGCAAGCTATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS GCA 90 bp ACAACAGAATCATCCATCACTGCAATAGCTTGCTCTGCTTTATGTTaGAGAGCTAGAAGTGCAGCCTGCCGTCCCTGTAGAGCTCTTAGT +
Preference number: 5 (lower is better)
Translates to: TTESSITAIACSALC*RARSAACRPCRALS
Trigger: ACTAAGAGCTCTACAGGGACGGCAGGCTGCACTTCTAGCTCTGCAACATAAAGCAGAGCAAGCTATTGCAGTGATGGATGATTCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS-3UTR CAA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACATCTGCCTGTCTTCTATaGTCTGGAACAGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTSACLL*SGTAGG
Trigger: GCCTCCAGCTGTTCCAGACAATAGAAGACAGGCAGA...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS TCA 90 bp CTGCTCTCCATTGCAGGTTCTCCCCTCCCATCTTCTTCAGACACCTaGCAGTTTTGCAAGAGGTCATTACTTAAAGCAGAAGCAAACAAC +
Preference number: 5 (lower is better)
Translates to: LLSIAGSPLPSSSDT*QFCKRSLLKAEANN
Trigger: GTTGTTTGCTTCTGCTTTAAGTAATGACCTCTTGCAAAACTGTCAGGTGTCTGAAGAAGATGGGAGGGGAGAACCTGCAATGGAGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518985.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 90 bp TCAAATTCAGCATCTTCTGGATGCTCATCAACCAGACTGCTCCTGTaGCTAGATAATGAAGCTCCACTGACTCCCTCCTCTTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SNSASSGCSSTRLLL*LDNEAPLTPSSSAS
Trigger: AGAAGCAGAAGAGGAGGGAGTCAGTGGAGCTTCATTATCTAGTCACAGGAGCAGTCTGGTTGATGAGCATCCAGAAGATGCTGAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000519253.5
ENST00000524226.5
CDS TCA 90 bp AAGGGTTCCATTTCAGGTAAACGTAACGGCAAAGGGTTAGGCTGTTaGGTTGAATCAACAGTAGGAGGTGACTCCTTATGGGCAGCACTA +
Preference number: 5 (lower is better)
Translates to: KGSISGKRNGKGLGC*VESTVGGDSLWAAL
Trigger: TAGTGCTGCCCATAAGGAGTCACCTCCTACTGTTGATTCAACTCAACAGCCTAACCCTTTGCCGTTACGTTTACCTGAAATGGAACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000519802.5
ENST00000522275.5
ENST00000524203.1
CDS GCA 90 bp ATAGCACTGGTTCAACTGGTGCATTATGAAGTGTACTTGAGGAGATaGAACATTGCTGGGCATAACACTGTAAGGACCCGTGAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: IALVQLVHYEVYLRR*NIAGHNTVRTREKS
Trigger: ACTCTTCTCACGGGTCCTTACAGTGTTATGCCCAGCAATGTTGCATCTCCTCAAGTACACTTCATAATGCACCAGTTGAACCAGTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp ATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAGCACCCCAATCCATATaGTTGAGCCTGTCATCAACA +
Preference number: 5 (lower is better)
Translates to: MPTQHTHASSTYPLRMFTAPQSI*LSLSST
Trigger: TGTTGATGACAGGCTCAACAATATGGATTGGGGTGC...TGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CAA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACAAGCTGTTGCTCTACCTaGGGAATCACTTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTSCCST*GITSNA
Trigger: AGCATTGGAAGTGATTCCCAAGGTAGAGCAACAGCT...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS TCA 90 bp TTGAGCCTGTCATCAACATTCTCATTACTCCAGTTTGGTAAATCCTaGTCATTCATGCCATCTTCAAAGGGACCTCCTCCTGTGGCCATA +
Preference number: 5 (lower is better)
Translates to: LSLSSTFSLLQFGKS*SFMPSSKGPPPVAI
Trigger: TATGGCCACAGGAGGAGGTCCCTTTGAAGATGGCATGAATGATCAGGATTTACCAAACTGGAGTAATGAGAATGTTGATGACAGGCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518936.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 90 bp TGGGAACGTATGTGGAGTCTTTGTTCTTCGCCTTCCAACTCCTGGTaGCGACTCCGGAGAAATATCATTGGTTACTCTTTTATCACTTTC +
Preference number: 5 (lower is better)
Translates to: WERMWSLCSSPSNSW*RLRRNIIGYSFITF
Trigger: GAAAGTGATAAAAGAGTAACCAATGATATTTCTCCGGAGTCGTCACCAGGAGTTGGAAGGCGAAGAACAAAGACTCCACATACGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518936.5
ENST00000518985.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 90 bp GATGCACTACTGCCTCTTTCCTTGCCTCCAGGTTTTTCTGGATGCTaGTTTTGCTGGCGCATAAGTTCATTTAGCATTTGTTTCAACCTC +
Preference number: 5 (lower is better)
Translates to: DALLPLSLPPGFSGC*FCWRISSFSICFNL
Trigger: GAGGTTGAAACAAATGCTAAATGAACTTATGCGCCAGCAAAATCAGCATCCAGAAAAACCTGGAGGCAAGGAAAGAGGCAGTAGTGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS TCA 90 bp GATTCAGTATCAGGACTTCCAGCCAGAGAGCTTTCAGGAGTTTCCTaGGCAGATTTAACTTCTTTGACTCTAGGCACTAAGGGTTCCATT +
Preference number: 5 (lower is better)
Translates to: DSVSGLPARELSGVS*ADLTSLTLGTKGSI
Trigger: AATGGAACCCTTAGTGCCTAGAGTCAAAGAAGTTAAATCTGCTCAGGAAACTCCTGAAAGCTCTCTGGCTGGAAGTCCTGATACTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000519802.5
ENST00000522275.5
ENST00000524203.1
CDS CCA 90 bp ATCCTTCACTTCCTCACCTACTTGCGTACTGTGTCGACTCAATTCTaGCTAAACTCCACTGTCTGTTTTCTCTGCTACTATTCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: ILHFLTYLRTVSTQF*LNSTVCFLCYYSQA
Trigger: AGCTTGAGAATAGTAGCAGAGAAAACAGACAGTGGAGTTTAGCCAGAATTGAGTCGACACAGTACGCAAGTAGGTGAGGAAGTGAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS-3UTR CAA 90 bp AATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTACGTATGTGGAGTCTTaGTTCTTCGCCTTCCAACTC +
Preference number: 5 (lower is better)
Translates to: NYAHTTHTRLFYLSLKNVTYVES*FFAFQL
Trigger: GAGTTGGAAGGCGAAGAACAAAGACTCCACATACGT...AACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CAA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACAGATGATGTGAGGCTATaGGATTCTCCATTGACAACC +
Preference number: 5 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTDDVRL*DSPLTT
Trigger: GGTTGTCAATGGAGAATCCAATAGCCTCACATCATC...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS TCA 90 bp ATCTGCATAGGCAAAAAGTTGAAGGGCTTTCGGTTTTCACTAAGCTaGCGTTTGTTGTTAGCAGCTGTTGCTCTACCTTGGGAATCACTT +
Preference number: 5 (lower is better)
Translates to: ICIGKKLKGFRFSLS*RLLLAAVALPWESL
Trigger: AAGTGATTCCCAAGGTAGAGCAACAGCTGCTAACAACAAACGTCAGCTTAGTGAAAACCGAAAGCCCTTCAACTTTTTGCCTATGCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 90 bp ATTTTGCTTGGTGTCTTCTTCTGCTGGGTAGAAATCATCCAAATTTaGTGCACTGGCAGAGATAACTCCTTGAGCTGCATCATCATCCTG +
Preference number: 5 (lower is better)
Translates to: ILLGVFFCWVEIIQI*CTGRDNSLSCIIIL
Trigger: CAGGATGATGATGCAGCTCAAGGAGTTATCTCTGCCAGTGCATCAAATTTGGATGATTTCTACCCAGCAGAAGAAGACACCAAGCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000517836.5
ENST00000519253.5
ENST00000524226.5
CDS TCA 90 bp AAGAGAGCTCTGACACCCAACGAAGGTTTTCTTGCCGTTGCATGCTaGTATTCTGTTGCCTTGTCTTGGCTAAAGGACGATAATTTTCAT +
Preference number: 5 (lower is better)
Translates to: KRALTPNEGFLAVAC*YSVALSWLKDDNFH
Trigger: ATGAAAATTATCGTCCTTTAGCCAAGACAAGGCAACAGAATATCAGCATGCAACGGCAAGAAAACCTTCGTTGGGTGTCAGAGCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS TCA 90 bp GATTTGTTCTTGCCATTGTTCTTTCTCTTCTACGTAAGAGAGCTCTaGCACCCAACGAAGGTTTTCTTGCCGTTGCATGCTGATATTCTG +
Preference number: 5 (lower is better)
Translates to: DLFLPLFFLFYVREL*HPTKVFLPLHADIL
Trigger: CAGAATATCAGCATGCAACGGCAAGAAAACCTTCGTTGGGTGTCAGAGCTCTCTTACGTAGAAGAGAAAGAACAATGGCAAGAACAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS TCA 90 bp TCGATGCTTCCAGAGGCCACAGGGGGTCTCTTTCAAATCCTACTCTaGCACCAAACTGTAAAAGACAAATATAGTCATTCACTAACACTG +
Preference number: 5 (lower is better)
Translates to: SMLPEATGGLFQILL*HQTVKDKYSHSLTL
Trigger: CAGTGTTAGTGAATGACTATATTTGTCTTTTACAGTTTGGTGTCAGAGTAGGATTTGAAAGAGACCCCCTGTGGCCTCTGGAAGCATCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524203.1
CDS GCA 90 bp TGCAGAGCTAGAAGTGCAGCCTGCCGTCCCTGTAGAGCTCTTAGTTaGTCCTGCTGTTGTAACATTCTTTTTAATAAATCATGTTGTTTC +
Preference number: 5 (lower is better)
Translates to: CRARSAACRPCRALS*SCCCNILFNKSCCF
Trigger: GAAACAACATGATTTATTAAAAAGAATGTTACAACAGCAGGAGCAACTAAGAGCTCTACAGGGACGGCAGGCTGCACTTCTAGCTCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS GCA 90 bp TCACTCCCAGTTTCTGGCGCTTCATTGCATGCATTTCTGTTAGACTaGTGTAGTATTCTCCTAGCATGTGCTGAAGATATTTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: SLPVSGASLHAFLLD*CSILLACAEDISVD
Trigger: GTCTACAGAAATATCTTCAGCACATGCTAGGAGAATACTACAGCAGTCTAACAGAAATGCATGCAATGAAGCGCCAGAAACTGGGAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522275.5
CDS CCA 90 bp ACTTTCTCATCAGGTAAACGTTCTGAAGCTGATGGTTTCCTGCTCTaGGAAACCTCCCTAGTTAATGAAAGACTTTCTGCCTGTCTTCTA +
Preference number: 5 (lower is better)
Translates to: TFSSGKRSEADGFLL*ETSLVNERLSACLL
Trigger: TAGAAGACAGGCAGAAAGTCTTTCATTAACTAGGGAGGTTTCCCAGAGCAGGAAACCATCAGCTTCAGAACGTTTACCTGATGAGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCTGCCTGTCTTCTATaGTCTGGAACAGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSACLL*SGTAGG
Trigger: GCCTCCAGCTGTTCCAGACAATAGAAGACAGGCAGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp CCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACAACAAGTTTTTCAGATGGATaGAGGTGGCCTTCGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PTQHTHASSTYPLRMFTTSFSDG*RWPSFS
Trigger: TGAAAACGAAGGCCACCTCAATCCATCTGAAAAACT...TGTTGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS TCA 90 bp AGCACCATCTCCATCCTCAATAATCCTGCAGGTGCATCTCATATTTaGGTTACTTTCAGCCTCAGTCTTCATACGCTCATATTCTCTCAT +
Preference number: 5 (lower is better)
Translates to: STISILNNPAGASHI*VTFSLSLHTLIFSH
Trigger: ATGAGAGAATATGAGCGTATGAAGACTGAGGCTGAAAGTAACTCAAATATGAGATGCACCTGCAGGATTATTGAGGATGGAGATGGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS TCA 90 bp AATTCTAGGACATGGGATGGTAGAAACTTCACTTACAGGTTGTTGTaGACTACGATTTTCAATAACGGGAGTTTCTGCACCAGCACCATC +
Preference number: 5 (lower is better)
Translates to: NSRTWDGRNFTYRLL*TTIFNNGSFCTSTI
Trigger: GATGGTGCTGGTGCAGAAACTCCCGTTATTGAAAATCGTAGTTCACAACAACCTGTAAGTGAAGTTTCTACCATCCCATGTCCTAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519253.5
CDS GCA 90 bp CTGTTAGAAGGACACACAGAAAAGTTATCATTGGAACTGGCATCTTaGTCTTCTTCCTCCTCTTCATCTGTCCGAACAATTCCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LLEGHTEKLSLELAS*SSSSSSSVRTIPSE
Trigger: TTCTGAAGGAATTGTTCGGACAGATGAAGAGGAGGAAGAAGAGCAAGATGCCAGTTCCAATGATAACTTTTCTGTGTGTCCTTCTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000518762.1
ENST00000519253.5
ENST00000524226.5
ENST00000524356.1
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCATCTTAGGATCTCATaGTGGTGGGAGAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLHLRIS*WWEKRG
Trigger: GCCCCTCTTCTCCCACCACAATGAGATCCTAAGATG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325083.12
CDS-3UTR CAA 90 bp ATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTACATTTCTGATGATCTATTaGCTTTCTTCTGTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: MPTQHTHASSTYPLRMFTFLMIY*LSSVGH
Trigger: GTGCCCAACAGAAGAAAGCAAATAGATCATCAGAAA...TGTAAACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCTGCCTGTCTTCTATaGTCTGGAACAGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSACLL*SGTAGG
Trigger: GCCTCCAGCTGTTCCAGACAATAGAAGACAGGCAGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTATTGGATTCTCCATaGACAACCGGTGCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLLDSP*TTGAKP
Trigger: AGGCTTGGCACCGGTTGTCAATGGAGAATCCAATAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGGCAGAGATAACTCCTaGAGCTGCATCATCATCCTG +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTGRDNS*SCIIIL
Trigger: CAGGATGATGATGCAGCTCAAGGAGTTATCTCTGCC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTACTGCCTCTTTCCTaGCCTCCAGGTTTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLLPLS*PPGFSG
Trigger: TCCAGAAAAACCTGGAGGCAAGGAAAGAGGCAGTAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTACTGCCTCTTTCCTaGCCTCCAGGTTTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLLPLS*PPGFSG
Trigger: TCCAGAAAAACCTGGAGGCAAGGAAAGAGGCAGTAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS TCA 90 bp ACCAGCCCCTTGATCGTTTCTCTCTCCCTAAATCCATCAATCCCTTaGTTCTTTACTCAAACCCAAACCCAACTAAGTCATTGCAAAAAT +
Preference number: 5 (lower is better)
Translates to: TSPLIVSLSLNPSIP*FFTQTQTQLSHCKN
Trigger: ATTTTTGCAATGACTTAGTTGGGTTTGGGTTTGAGTAAAGAATCAAGGGATTGATGGATTTAGGGAGAGAGAAACGATCAAGGGGCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS GCA 90 bp GCTAGAAGTGCAGCCTGCCGTCCCTGTAGAGCTCTTAGTTGCTCCTaGTGTTGTAACATTCTTTTTAATAAATCATGTTGTTTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: ARSAACRPCRALSCS*CCNILFNKSCCFFK
Trigger: TTTGAAGAAACAACATGATTTATTAAAAAGAATGTTACAACAGCAGGAGCAACTAAGAGCTCTACAGGGACGGCAGGCTGCACTTCTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCACCCCAATCCATATaGTTGAGCCTGTCATCAACA +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAPQSI*LSLSST
Trigger: TGTTGATGACAGGCTCAACAATATGGATTGGGGTGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAACGTATGTGGAGTCTTaGTTCTTCGCCTTCCAACTC +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTTYVES*FFAFQL
Trigger: GAGTTGGAAGGCGAAGAACAAAGACTCCACATACGT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACGTATGTGGAGTCTTaGTTCTTCGCCTTCCAACTC +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKTYVES*FFAFQL
Trigger: GAGTTGGAAGGCGAAGAACAAAGACTCCACATACGT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAGCTGTTGCTCTACCTaGGGAATCACTTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSCCST*GITSNA
Trigger: AGCATTGGAAGTGATTCCCAAGGTAGAGCAACAGCT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGCTGTTGCTCTACCTaGGGAATCACTTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSCCST*GITSNA
Trigger: AGCATTGGAAGTGATTCCCAAGGTAGAGCAACAGCT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp AGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCCACTATTGGATTCTCCATaGACAACCGGTGCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: SSQKLCYITSLRQLKLCPLLDSP*TTGAKP
Trigger: AGGCTTGGCACCGGTTGTCAATGGAGAATCCAATAG...TGGGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCTATTGGATTCTCCATaGACAACCGGTGCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLLDSP*TTGAKP
Trigger: AGGCTTGGCACCGGTTGTCAATGGAGAATCCAATAG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGCAGAGATAACTCCTaGAGCTGCATCATCATCCTG +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGRDNS*SCIIIL
Trigger: CAGGATGATGATGCAGCTCAAGGAGTTATCTCTGCC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGTCAGGGCATGCCGTTaGCAATGCTTGAATTTTCTC +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTVRACR*QCLNFL
Trigger: GAGAAAATTCAAGCATTGCAAACGGCATGCCCTGAC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGTCAGGGCATGCCGTTaGCAATGCTTGAATTTTCTC +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKVRACR*QCLNFL
Trigger: GAGAAAATTCAAGCATTGCAAACGGCATGCCCTGAC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGCACCCCAATCCATATaGTTGAGCCTGTCATCAACA +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLAPQSI*LSLSST
Trigger: TGTTGATGACAGGCTCAACAATATGGATTGGGGTGC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGCTGTTGCTCTACCTaGGGAATCACTTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSCCST*GITSNA
Trigger: AGCATTGGAAGTGATTCCCAAGGTAGAGCAACAGCT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp AATTATGCCCACACAACACACACACGCCTCTTCTACCTATCCCTTAAGAATGTTTGTAGCACTCTCATTTaGCTAAAAAGTTCGACTTTC +
Preference number: 5 (lower is better)
Translates to: NYAHTTHTRLFYLSLKNVCSTLI*LKSSTF
Trigger: GAAAGTCGAACTTTTTAGCAAAATGAGAGTGCTACA...AACATTCTTAAGGGATAGGTAGAAGAGGCGTGTGTGTGTTGTGTGGGCATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGATGATGTGAGGCTATaGGATTCTCCATTGACAACC +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTDDVRL*DSPLTT
Trigger: GGTTGTCAATGGAGAATCCAATAGCCTCACATCATC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGATGATGTGAGGCTATaGGATTCTCCATTGACAACC +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKDDVRL*DSPLTT
Trigger: GGTTGTCAATGGAGAATCCAATAGCCTCACATCATC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACTCATCATCTTCACCTaGTGCAACATGAATCTCCTG +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTLIIFT*CNMNLL
Trigger: CAGGAGATTCATGTTGCACAAGGTGAAGATGATGAG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTCATCATCTTCACCTaGTGCAACATGAATCTCCTG +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLIIFT*CNMNLL
Trigger: CAGGAGATTCATGTTGCACAAGGTGAAGATGATGAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCTGGCATATATTTTTaGGTGGGACAGTTACCCACA +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAGIYF*VGQLPT
Trigger: TGTGGGTAACTGTCCCACCAAAAAATATATGCCAGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGGCTCAAAAACAGATTaGCTTGTACTGGTCTCGTGT +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKGSKTD*LVLVSC
Trigger: ACACGAGACCAGTACAAGCAAATCTGTTTTTGAGCC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCCAACGAAGGTTTTCTaGCCGTTGCATGCTGATATT +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKPTKVF*PLHADI
Trigger: AATATCAGCATGCAACGGCAAGAAAACCTTCGTTGG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCTGAATACTTTTGCTaGAACAGGCTCTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAEYFC*NRLFSL
Trigger: CAGACTGAAGAGCCTGTTCAAGCAAAAGTATTCAGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCTGAATACTTTTGCTaGAACAGGCTCTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTAEYFC*NRLFSL
Trigger: CAGACTGAAGAGCCTGTTCAAGCAAAAGTATTCAGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCTCTTTGGCACAAGATaGTATCACTCCAGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKLFGTR*YHSSCF
Trigger: GAAGCAACTGGAGTGATACAATCTTGTGCCAAAGAG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGTTTCTGGCGCTTCATaGCATGCATTTCTGTTAGAC +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTVSGAS*HAFLLD
Trigger: GTCTAACAGAAATGCATGCAATGAAGCGCCAGAAAC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522275.5
CDS GCA 90 bp GCTACTTGTGGATTTCGAATGTTAGTAACAGGCTCGGAATTTTCATaGTCAGAATCATATTCTGACTCTTCAGTTTCTTCATCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: ATCGFRMLVTGSEFS*SESYSDSSVSSSFL
Trigger: CAGGAAAGATGAAGAAACTGAAGAGTCAGAATATGATTCTGAGCATGAAAATTCCGAGCCTGTTACTAACATTCGAAATCCACAAGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAATTTGCTTTCTTCTGTaGGGCACCCCAATCCATATT +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTICFLL*GTPIHI
Trigger: AATATGGATTGGGGTGCCCAACAGAAGAAAGCAAAT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTGCATAGGCAAAAAGTaGAAGGGCTTTCGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKCIGKK*KGFRFS
Trigger: TGAAAACCGAAAGCCCTTCAACTTTTTGCCTATGCA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATGCATAGGCAAAAAGTaGAAGGGCTTTCGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTCIGKK*KGFRFS
Trigger: TGAAAACCGAAAGCCCTTCAACTTTTTGCCTATGCA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAGTTTTTCAGATGGATaGAGGTGGCCTTCGTTTTCA +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSFSDG*RWPSFS
Trigger: TGAAAACGAAGGCCACCTCAATCCATCTGAAAAACT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACCAAGTGGAAGCTACTaGTGGATTTCGAATGTTAGT +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTPSGSY*WISNVS
Trigger: ACTAACATTCGAAATCCACAAGTAGCTTCCACTTGG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTTTAGAGCCCTTATGTaGGCAGCAGATCTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKFRALM*AADLLL
Trigger: TAACAACAGATCTGCTGCCAACATAAGGGCTCTAAA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATTTAGAGCCCTTATGTaGGCAGCAGATCTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTFRALM*AADLLL
Trigger: TAACAACAGATCTGCTGCCAACATAAGGGCTCTAAA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCAGCCATAAGTCGGTaGATCTTCTGTTCAAATTCA +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTAAISR*IFCSNS
Trigger: TGAATTTGAACAGAAGATCAACCGACTTATGGCTGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCAGCCATAAGTCGGTaGATCTTCTGTTCAAATTCA +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAAISR*IFCSNS
Trigger: TGAATTTGAACAGAAGATCAACCGACTTATGGCTGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGCTCAAAAACAGATTaGCTTGTACTGGTCTCGTGT +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGSKTD*LVLVSC
Trigger: ACACGAGACCAGTACAAGCAAATCTGTTTTTGAGCC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAAGGTTTTCTTGCCGTaGCATGCTGATATTCTGTTG +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKKVFLP*HADILL
Trigger: CAACAGAATATCAGCATGCAACGGCAAGAAAACCTT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCCAACGAAGGTTTTCTaGCCGTTGCATGCTGATATT +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLPTKVF*PLHADI
Trigger: AATATCAGCATGCAACGGCAAGAAAACCTTCGTTGG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTTCTGGATGCTGATTTaGCTGGCGCATAAGTTCATT +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKFWMLI*LAHKFI
Trigger: AATGAACTTATGCGCCAGCAAAATCAGCATCCAGAA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGCTGAATACTTTTGCTaGAACAGGCTCTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLAEYFC*NRLFSL
Trigger: CAGACTGAAGAGCCTGTTCAAGCAAAAGTATTCAGC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAAGGTGCATCTCATATTaGAGTTACTTTCAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTRCISY*SYFQPQ
Trigger: CTGAGGCTGAAAGTAACTCAAATATGAGATGCACCT...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGAGGTGCATCTCATATTaGAGTTACTTTCAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKRCISY*SYFQPQ
Trigger: CTGAGGCTGAAAGTAACTCAAATATGAGATGCACCT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCATAATTGCTTTAATTaGCCGGTCCAGCTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLHNCFN*PVQLLS
Trigger: ACTCAGCAGCTGGACCGGCAAATTAAAGCAATTATG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATTTGCTCTCATCATTTaGCTGGGTAAGGGTCAAAAC +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTFALII*LGKGQN
Trigger: GTTTTGACCCTTACCCAGCAAAATGATGAGAGCAAA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCTCTTTGGCACAAGATaGTATCACTCCAGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLLFGTR*YHSSCF
Trigger: GAAGCAACTGGAGTGATACAATCTTGTGCCAAAGAG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCAGATTTAACTTCTTaGACTCTAGGCACTAAGGGT +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKADLTS*TLGTKG
Trigger: ACCCTTAGTGCCTAGAGTCAAAGAAGTTAAATCTGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCAGATTTAACTTCTTaGACTCTAGGCACTAAGGGT +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTADLTS*TLGTKG
Trigger: ACCCTTAGTGCCTAGAGTCAAAGAAGTTAAATCTGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS TCA 90 bp ACTGTTCGCCCATCTCTATTATTAGAAACACACTGTGCATTACTATaGCTATTTACTTCATTCCAAGTGGAAGCTACTTGTGGATTTCGA +
Preference number: 5 (lower is better)
Translates to: TVRPSLLLETHCALL*LFTSFQVEATCGFR
Trigger: TCGAAATCCACAAGTAGCTTCCACTTGGAATGAAGTAAATAGTCATAGTAATGCACAGTGTGTTTCTAATAATAGAGATGGGCGAACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000519253.5
ENST00000524226.5
CDS CCA 90 bp CTTCTCCTAGTGAACTTACATTCTACAACACTGACTTTATTCTGCTaGACAGAGAATACCTTTATGTCACTTGCATGTGACAATGTACTA +
Preference number: 5 (lower is better)
Translates to: LLLVNLHSTTLTLFC*TENTFMSLACDNVL
Trigger: TAGTACATTGTCACATGCAAGTGACATAAAGGTATTCTCTGTCCAGCAGAATAAAGTCAGTGTTGTAGAATGTAAGTTCACTAGGAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATTTCTGATGATCTATTaGCTTTCTTCTGTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTFLMIY*LSSVGH
Trigger: GTGCCCAACAGAAGAAAGCAAATAGATCATCAGAAA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTGCATAGGCAAAAAGTaGAAGGGCTTTCGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLCIGKK*KGFRFS
Trigger: TGAAAACCGAAAGCCCTTCAACTTTTTGCCTATGCA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp AGTTCACAGAAACTATGTTACATCACATCTCTTAGACAACTCAAATTATGCCCATGCATAGGCAAAAAGTaGAAGGGCTTTCGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: SSQKLCYITSLRQLKLCPCIGKK*KGFRFS
Trigger: TGAAAACCGAAAGCCCTTCAACTTTTTGCCTATGCA...TGGGCATAATTTGAGTTGTCTAAGAGATGTGATGTAACATAGTTTCTGTGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518537.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGTTTTTCAGATGGATaGAGGTGGCCTTCGTTTTCA +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSFSDG*RWPSFS
Trigger: TGAAAACGAAGGCCACCTCAATCCATCTGAAAAACT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGCAGCCATAAGTCGGTaGATCTTCTGTTCAAATTCA +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLAAISR*IFCSNS
Trigger: TGAATTTGAACAGAAGATCAACCGACTTATGGCTGC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACAAAAACAGATTTGCTaGTACTGGTCTCGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTQKQIC*YWSRVD
Trigger: ATCAACACGAGACCAGTACAAGCAAATCTGTTTTTG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGCAAAAACAGATTTGCTaGTACTGGTCTCGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKQKQIC*YWSRVD
Trigger: ATCAACACGAGACCAGTACAAGCAAATCTGTTTTTG...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGAAAAGTTATCATaGGAACTGGCATCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKTEKLS*ELASCS
Trigger: AGAGCAAGATGCCAGTTCCAATGATAACTTTTCTGT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACAGCCGAAAAAGGGCAATaGTTCTTCCACCTATTTTTA +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTAEKGQ*FFHLFL
Trigger: TAAAAATAGGTGGAAGAACAATTGCCCTTTTTCGGC...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGCCGAAAAAGGGCAATaGTTCTTCCACCTATTTTTA +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKAEKGQ*FFHLFL
Trigger: TAAAAATAGGTGGAAGAACAATTGCCCTTTTTCGGC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTTCTGGATGCTGATTTaGCTGGCGCATAAGTTCATT +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLFWMLI*LAHKFI
Trigger: AATGAACTTATGCGCCAGCAAAATCAGCATCCAGAA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGGGCGTCTTCTTCCGTTaGTATCTAATTGATTTTTGC +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKGVFFR*YLIDFC
Trigger: GCAAAAATCAATTAGATACAAACGGAAGAAGACGCC...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAGGTGCATCTCATATTaGAGTTACTTTCAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLRCISY*SYFQPQ
Trigger: CTGAGGCTGAAAGTAACTCAAATATGAGATGCACCT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTTTGCTCTCATCATTTaGCTGGGTAAGGGTCAAAAC +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLFALII*LGKGQN
Trigger: GTTTTGACCCTTACCCAGCAAAATGATGAGAGCAAA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGATCCTTTTAGCCTCTTaGGCACAAGATTGTATCACT +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKILLAS*AQDCIT
Trigger: AGTGATACAATCTTGTGCCAAAGAGGCTAAAAGGAT...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCAGATCTTACATTTTaGGGACCATCATACACCTCA +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSDLTF*GPSYTS
Trigger: TGAGGTGTATGATGGTCCCAAAAATGTAAGATCTGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTCAGATCTTACATTTTaGGGACCATCATACACCTCA +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKSDLTF*GPSYTS
Trigger: TGAGGTGTATGATGGTCCCAAAAATGTAAGATCTGA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACACACAGGACAGTTATTTaGGTCATTTTTACTAGTGGC +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTHRTVI*VIFTSG
Trigger: GCCACTAGTAAAAATGACCAAAATAACTGTCCTGTG...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS GCA 90 bp TGGACAGAGAATACCTTTATGTCACTTGCATGTGACAATGTACTATaGGCTAAAAGTAATGTTTCAAGTAACTTTATACCAGGAAAGGGA +
Preference number: 5 (lower is better)
Translates to: WTENTFMSLACDNVL*AKSNVSSNFIPGKG
Trigger: TCCCTTTCCTGGTATAAAGTTACTTGAAACATTACTTTTAGCGCATAGTACATTGTCACATGCAAGTGACATAAAGGTATTCTCTGTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTGTAGCACTCTCATTTaGCTAAAAAGTTCGACTTTC +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKCSTLI*LKSSTF
Trigger: GAAAGTCGAACTTTTTAGCAAAATGAGAGTGCTACA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCAAAAACAGATTTGCTaGTACTGGTCTCGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLQKQIC*YWSRVD
Trigger: ATCAACACGAGACCAGTACAAGCAAATCTGTTTTTG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGGGCGTCTTCTTCCGTTaGTATCTAATTGATTTTTGC +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLGVFFR*YLIDFC
Trigger: GCAAAAATCAATTAGATACAAACGGAAGAAGACGCC...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATACCTAGATCATCTGTaGCAAAAGGCTCAAAATTTG +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTYLDHL*QKAQNL
Trigger: CAAATTTTGAGCCTTTTGCAACAGATGATCTAGGTA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGTACCTAGATCATCTGTaGCAAAAGGCTCAAAATTTG +
Preference number: 5 (lower is better)
Translates to: CFHICIEYVRTELDEPLKYLDHL*QKAQNL
Trigger: CAAATTTTGAGCCTTTTGCAACAGATGATCTAGGTA...CTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGATCCTTTTAGCCTCTTaGGCACAAGATTGTATCACT +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLILLAS*AQDCIT
Trigger: AGTGATACAATCTTGTGCCAAAGAGGCTAAAAGGAT...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCAGATCTTACATTTTaGGGACCATCATACACCTCA +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSDLTF*GPSYTS
Trigger: TGAGGTGTATGATGGTCCCAAAAATGTAAGATCTGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGAAGACATCCAATGGGACATTTTaGCTTTCTGCTGTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: FHICIEYVRTELDEPLKTSNGTF*LSAVFL
Trigger: TAAAAAGACAGCAGAAAGCAAAAATGTCCCATTGGA...TGTCTTCAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGCACAGGACAGTTATTTaGGTCATTTTTACTAGTGGC +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLHRTVI*VIFTSG
Trigger: GCCACTAGTAAAAATGACCAAAATAACTGTCCTGTG...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS TCA 90 bp AGTGATTCTTCATCAAACTGGCGTCTTCTTCCGTTTGTATCTAATTaGTTTTTGCGGTTACTACTTGTAGATTTTTCTACAGACACTGAA +
Preference number: 5 (lower is better)
Translates to: SDSSSNWRLLPFVSN*FLRLLLVDFSTDTE
Trigger: TTCAGTGTCTGTAGAAAAATCTACAAGTAGTAACCGCAAAAATCAATTAGATACAAACGGAAGAAGACGCCAGTTTGATGAAGAATCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000523540.1
ENST00000524226.5
CDS TCA 90 bp AGTAAATATGTCTTGGAGGTATCTTTGCAATACCCTTTGGAAGCATaGGCTAACAGTAATAAATCTAACCTTCACTGTTCTTTGATACTC +
Preference number: 5 (lower is better)
Translates to: SKYVLEVSLQYPLEA*ANSNKSNLHCSLIL
Trigger: GAGTATCAAAGAACAGTGAAGGTTAGATTTATTACTGTTAGCTCATGCTTCCAAAGGGTATTGCAAAGATACCTCCAAGACATATTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522777.1
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTGTAGCACTCTCATTTaGCTAAAAAGTTCGACTTTC +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLCSTLI*LKSSTF
Trigger: GAAAGTCGAACTTTTTAGCAAAATGAGAGTGCTACA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTACCTAGATCATCTGTaGCAAAAGGCTCAAAATTTG +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLYLDHL*QKAQNL
Trigger: CAAATTTTGAGCCTTTTGCAACAGATGATCTAGGTA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS-3UTR CAA 90 bp TATTGTTTTCATATATGCATTGAGTATGTAAGGACAGAGTTAGATGAGCCTCTGTCCAATGGGACATTTTaGCTTTCTGCTGTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: YCFHICIEYVRTELDEPLSNGTF*LSAVFL
Trigger: TAAAAAGACAGCAGAAAGCAAAAATGTCCCATTGGA...CAGAGGCTCATCTAACTCTGTCCTTACATACTCAATGCATATATGAAAACAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
CDS CCA 72 bp CCTCGGAGACCGCAGCAGAGAGGCCCACACGTTTCCTaGCTGCCTCGGCCCCAGTGGCCGCCTTTTCGACCT +
Preference number: 6 (lower is better)
Translates to: PRRPQQRGPHVS*LPRPQWPPFRP
Trigger: AGGTCGAAAAGGCGGCCACTGGGGCCGAGGCAGCCAGGAAACGTGTGGGCCTCTCTGCTGCGGTCTCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000325083.12
ENST00000517545.5
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000518936.5
ENST00000519253.5
ENST00000523055.5
CDS CCA 72 bp AACCGCCGCAGCCACCGCCATCTTAGGATCTCATTGTaGTGGGAGAAGAGGGGCGGGGGTACTGCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: NRRSHRHLRISL*WEKRGGGTAEG
Trigger: CCCCTCTGCAGTACCCCCGCCCCTCTTCTCCCACCACAATGAGATCCTAAGATGGCGGTGGCTGCGGCGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325083.12
CDS CAA 72 bp GCCAACCGCCGCAGCCACCGCCATCTTAGGATCTCATaGTGGTGGGAGAAGAGGGGCGGGGGTACTGCAGAG +
Preference number: 6 (lower is better)
Translates to: ANRRSHRHLRIS*WWEKRGGGTAE
Trigger: CTCTGCAGTACCCCCGCCCCTCTTCTCCCACCACAATGAGATCCTAAGATGGCGGTGGCTGCGGCGGTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325083.12
CDS TCA 72 bp GACAACCGGTGCCAAGCCTACAGAAGCAGAGGGAGCTaGAGTACTTCTCTGATCGACACTCCTTTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: DNRCQAYRSRGS*STSLIDTPLWR
Trigger: TCTCCACAAAGGAGTGTCGATCAGAGAAGTACTTCAGCTCCCTCTGCTTCTGTAGGCTTGGCACCGGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000524226.5
CDS GCA 72 bp TGCTCTGCTTTATGTTGCAGAGCTAGAAGTGCAGCCTaGCGTCCCTGTAGAGCTCTTAGTTGCTCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: CSALCCRARSAA*RPCRALSCSCC
Trigger: ACAGCAGGAGCAACTAAGAGCTCTACAGGGACGGCAGGCTGCACTTCTAGCTCTGCAACATAAAGCAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 72 bp GTGGGGCGTTCCTGTAATCCCAGCTGTTTGGTAGGCTaGGTAAGGAGAATCAATTGCTTGAACTCGGGAGGA +
Preference number: 6 (lower is better)
Translates to: VGRSCNPSCLVG*VRRINCLNSGG
Trigger: TCCTCCCGAGTTCAAGCAATTGATTCTCCTTACTCAGCCTACCAAACAGCTGGGATTACAGGAACGCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS GCA 72 bp TTGAACAAGCCTGCTTACAATCTGGCTGCTCTCCATTaGAGGTTCTCCCCTCCCATCTTCTTCAGACACCTG +
Preference number: 6 (lower is better)
Translates to: LNKPAYNLAALH*RFSPPIFFRHL
Trigger: CAGGTGTCTGAAGAAGATGGGAGGGGAGAACCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCTTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 72 bp GCATCTTCTGGATGCTCATCAACCAGACTGCTCCTGTaGCTAGATAATGAAGCTCCACTGACTCCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: ASSGCSSTRLLL*LDNEAPLTPSS
Trigger: AGAGGAGGGAGTCAGTGGAGCTTCATTATCTAGTCACAGGAGCAGTCTGGTTGATGAGCATCCAGAAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000519253.5
ENST00000524226.5
CDS CAA 72 bp TCATGTATCTACTGTGTGGGAACGTATGTGGAGTCTTaGTTCTTCGCCTTCCAACTCCTGGTGACGACTCCG +
Preference number: 6 (lower is better)
Translates to: SCIYCVGTYVES*FFAFQLLVTTP
Trigger: CGGAGTCGTCACCAGGAGTTGGAAGGCGAAGAACAAAGACTCCACATACGTTCCCACACAGTAGATACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518936.5
ENST00000518985.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS CAA 72 bp GCCTTGCTAGCTAGCATCCTTCACTTCCTCACCTACTaGCGTACTGTGTCGACTCAATTCTGGCTAAACTCC +
Preference number: 6 (lower is better)
Translates to: ALLASILHFLTY*RTVSTQFWLNS
Trigger: GGAGTTTAGCCAGAATTGAGTCGACACAGTACGCAAGTAGGTGAGGAAGTGAAGGATGCTAGCTAGCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS TCA 72 bp CGATGTGCTCTCAGCTACAGAACCAGATCCCACAGCTaGATCTATAGTCCGAACATCCTCCTCCTCATTTTC +
Preference number: 6 (lower is better)
Translates to: RCALSYRTRSHS*IYSPNILLLIF
Trigger: GAAAATGAGGAGGAGGATGTTCGGACTATAGATTCAGCTGTGGGATCTGGTTCTGTAGCTGAGAGCACATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517730.5
ENST00000518537.5
CDS TCA 72 bp AAAGCAGCACGCCGAAAAGCAGAGCAAACAGGGCGGTaGACCCAGAAAGTTTGTTTACTAAGCAGAGAGGAT +
Preference number: 6 (lower is better)
Translates to: KAARRKAEQTGR*TQKVCLLSRED
Trigger: ATCCTCTCTGCTTAGTAAACAAACTTTCTGGGTTCACCGCCCTGTTTGCTCTGCTTTTCGGCGTGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS GCA 72 bp CTGAAGCCTCAGACTGCACATCTATGTTTAGCGATGTaGTCTCAGCTACAGAACCAGATCCCACAGCTGAAT +
Preference number: 6 (lower is better)
Translates to: LKPQTAHLCLAM*SQLQNQIPQLN
Trigger: ATTCAGCTGTGGGATCTGGTTCTGTAGCTGAGAGCACATCGCTAAACATAGATGTGCAGTCTGAGGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517730.5
ENST00000518537.5
CDS CCA 72 bp CTCTGGGACAGACATCTGACTCATGTATCTACTGTGTaGGAACGTATGTGGAGTCTTTGTTCTTCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LWDRHLTHVSTV*ERMWSLCSSPS
Trigger: GGAAGGCGAAGAACAAAGACTCCACATACGTTCCCACACAGTAGATACATGAGTCAGATGTCTGTCCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518985.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS CAA 90 bp ACATCTGACTCATGTATCTACTGTGTGGGAACGTATGTGGAGTCTTaGTTCTTCGCCTTCCAACTCCTGGTGACGACTCCGGAGAAATAT +
Preference number: 6 (lower is better)
Translates to: TSDSCIYCVGTYVES*FFAFQLLVTTPEKY
Trigger: ATATTTCTCCGGAGTCGTCACCAGGAGTTGGAAGGCGAAGAACAAAGACTCCACATACGTTCCCACACAGTAGATACATGAGTCAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518936.5
ENST00000518985.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS CAA 90 bp TGCAAAAATGCCTTGCTAGCTAGCATCCTTCACTTCCTCACCTACTaGCGTACTGTGTCGACTCAATTCTGGCTAAACTCCACTGTCTGT +
Preference number: 6 (lower is better)
Translates to: CKNALLASILHFLTY*RTVSTQFWLNSTVC
Trigger: ACAGACAGTGGAGTTTAGCCAGAATTGAGTCGACACAGTACGCAAGTAGGTGAGGAAGTGAAGGATGCTAGCTAGCAAGGCATTTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS TCA 72 bp AAGCCTACAGAAGCAGAGGGAGCTGAAGTACTTCTCTaGTCGACACTCCTTTGTGGAGAGGATGATGAATTG +
Preference number: 6 (lower is better)
Translates to: KPTEAEGAEVLL*STLLCGEDDEL
Trigger: CAATTCATCATCCTCTCCACAAAGGAGTGTCGATCAGAGAAGTACTTCAGCTCCCTCTGCTTCTGTAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000524226.5
CDS TCA 72 bp CTGACACCCAACGAAGGTTTTCTTGCCGTTGCATGCTaGTATTCTGTTGCCTTGTCTTGGCTAAAGGACGAT +
Preference number: 6 (lower is better)
Translates to: LTPNEGFLAVAC*YSVALSWLKDD
Trigger: ATCGTCCTTTAGCCAAGACAAGGCAACAGAATATCAGCATGCAACGGCAAGAAAACCTTCGTTGGGTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS GCA 72 bp GAGAGCTCTGACACCCAACGAAGGTTTTCTTGCCGTTaGATGCTGATATTCTGTTGCCTTGTCTTGGCTAAA +
Preference number: 6 (lower is better)
Translates to: ESSDTQRRFSCR*MLIFCCLVLAK
Trigger: TTTAGCCAAGACAAGGCAACAGAATATCAGCATGCAACGGCAAGAAAACCTTCGTTGGGTGTCAGAGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS GCA 72 bp AGGGTCAAAACCATGCGCCTTACTGAAGTTAGAAGCTaGGAGGAGCATACTTCATCCATGTGCTCCTTCAAA +
Preference number: 6 (lower is better)
Translates to: RVKTMRLTEVRS*EEHTSSMCSFK
Trigger: TTTGAAGGAGCACATGGATGAAGTATGCTCCTCGCAGCTTCTAACTTCAGTAAGGCGCATGGTTTTGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS CAA 72 bp AAAAGCAGAGCAAACAGGGCGGTGAACCCAGAAAGTTaGTTTACTAAGCAGAGAGGATCCTCAGTCATGCAC +
Preference number: 6 (lower is better)
Translates to: KSRANRAVNPES*FTKQRGSSVMH
Trigger: GTGCATGACTGAGGATCCTCTCTGCTTAGTAAACAAACTTTCTGGGTTCACCGCCCTGTTTGCTCTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS TCA 72 bp GGCAAAAAGTTGAAGGGCTTTCGGTTTTCACTAAGCTaGCGTTTGTTGTTAGCAGCTGTTGCTCTACCTTGG +
Preference number: 6 (lower is better)
Translates to: GKKLKGFRFSLS*RLLLAAVALPW
Trigger: CCAAGGTAGAGCAACAGCTGCTAACAACAAACGTCAGCTTAGTGAAAACCGAAAGCCCTTCAACTTTTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 72 bp GGTGTCTTCTTCTGCTGGGTAGAAATCATCCAAATTTaGTGCACTGGCAGAGATAACTCCTTGAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: GVFFCWVEIIQI*CTGRDNSLSCI
Trigger: GATGCAGCTCAAGGAGTTATCTCTGCCAGTGCATCAAATTTGGATGATTTCTACCCAGCAGAAGAAGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000517836.5
ENST00000519253.5
ENST00000524226.5
CDS GCA 72 bp TCTCATTACTCCAGTTTGGTAAATCCTGATCATTCATaGCATCTTCAAAGGGACCTCCTCCTGTGGCCATAC +
Preference number: 6 (lower is better)
Translates to: SHYSSLVNPDHS*HLQRDLLLWPY
Trigger: GTATGGCCACAGGAGGAGGTCCCTTTGAAGATGGCATGAATGATCAGGATTTACCAAACTGGAGTAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518936.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS GCA 72 bp TCTGCAACAACAGAATCATCCATCACTGCAATAGCTTaGTCTGCTTTATGTTGCAGAGCTAGAAGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SATTESSITAIA*SALCCRARSAA
Trigger: GGCTGCACTTCTAGCTCTGCAACATAAAGCAGAGCAAGCTATTGCAGTGATGGATGATTCTGTTGTTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518930.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS GCA 72 bp GTTCAACTGGTGCATTATGAAGTGTACTTGAGGAGATaGAACATTGCTGGGCATAACACTGTAAGGACCCGT +
Preference number: 6 (lower is better)
Translates to: VQLVHYEVYLRR*NIAGHNTVRTR
Trigger: ACGGGTCCTTACAGTGTTATGCCCAGCAATGTTGCATCTCCTCAAGTACACTTCATAATGCACCAGTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS CCA 72 bp TCAGGTAAACGTTCTGAAGCTGATGGTTTCCTGCTCTaGGAAACCTCCCTAGTTAATGAAAGACTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SGKRSEADGFLL*ETSLVNERLSA
Trigger: GGCAGAAAGTCTTTCATTAACTAGGGAGGTTTCCCAGAGCAGGAAACCATCAGCTTCAGAACGTTTACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS CCA 72 bp GAGTTAGATGAGCCTCTGAAGACATCTCATATACTCTaGGCTCCCACCGTTTCAGGTTCTTTTAGTGTCTCA +
Preference number: 6 (lower is better)
Translates to: ELDEPLKTSHIL*APTVSGSFSVS
Trigger: TGAGACACTAAAAGAACCTGAAACGGTGGGAGCCCAGAGTATATGAGATGTCTTCAGAGGCTCATCTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000519802.5
ENST00000522275.5
ENST00000523896.1
ENST00000524226.5
CDS TCA 72 bp ATGTGGAGTCTTTGTTCTTCGCCTTCCAACTCCTGGTaGCGACTCCGGAGAAATATCATTGGTTACTCTTTT +
Preference number: 6 (lower is better)
Translates to: MWSLCSSPSNSW*RLRRNIIGYSF
Trigger: AAAAGAGTAACCAATGATATTTCTCCGGAGTCGTCACCAGGAGTTGGAAGGCGAAGAACAAAGACTCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518936.5
ENST00000518985.1
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 72 bp TTAGCTGAGTATAGCACTGGTTCAACTGGTGCATTATaGAGTGTACTTGAGGAGATGCAACATTGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: LAEYSTGSTGAL*SVLEEMQHCWA
Trigger: TGCCCAGCAATGTTGCATCTCCTCAAGTACACTTCATAATGCACCAGTTGAACCAGTGCTATACTCAGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS TCA 72 bp CTGCCTCTTTCCTTGCCTCCAGGTTTTTCTGGATGCTaGTTTTGCTGGCGCATAAGTTCATTTAGCATTTGT +
Preference number: 6 (lower is better)
Translates to: LPLSLPPGFSGC*FCWRISSFSIC
Trigger: ACAAATGCTAAATGAACTTATGCGCCAGCAAAATCAGCATCCAGAAAAACCTGGAGGCAAGGAAAGAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS TCA 72 bp ATTTCAGGTAAACGTAACGGCAAAGGGTTAGGCTGTTaGGTTGAATCAACAGTAGGAGGTGACTCCTTATGG +
Preference number: 6 (lower is better)
Translates to: ISGKRNGKGLGC*VESTVGGDSLW
Trigger: CCATAAGGAGTCACCTCCTACTGTTGATTCAACTCAACAGCCTAACCCTTTGCCGTTACGTTTACCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000519802.5
ENST00000522275.5
ENST00000524203.1
CDS GCA 72 bp GTTTTCACTAAGCTGACGTTTGTTGTTAGCAGCTGTTaGTCTACCTTGGGAATCACTTCCAATGCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: VFTKLTFVVSSC*STLGITSNASL
Trigger: CAGAGAAGCATTGGAAGTGATTCCCAAGGTAGAGCAACAGCTGCTAACAACAAACGTCAGCTTAGTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS CCA 72 bp TTCCTCACCTACTTGCGTACTGTGTCGACTCAATTCTaGCTAAACTCCACTGTCTGTTTTCTCTGCTACTAT +
Preference number: 6 (lower is better)
Translates to: FLTYLRTVSTQF*LNSTVCFLCYY
Trigger: ATAGTAGCAGAGAAAACAGACAGTGGAGTTTAGCCAGAATTGAGTCGACACAGTACGCAAGTAGGTGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS CAA 90 bp AAGATCTTCCCGCATGGAACTAGCTTTAGTAATATAATCGCGAATTaGAACAAGCCTGCTTACAATCTGGCTGCTCTCCATTGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: KIFPHGTSFSNIIAN*NKPAYNLAALHCRF
Trigger: GAACCTGCAATGGAGAGCAGCCAGATTGTAAGCAGGCTTGTTCAAATTCGCGATTATATTACTAAAGCTAGTTCCATGCGGGAAGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS CAA 90 bp TTCTTTACTCAAACCCAAACCCAACTAAGTCATTGCAAAAATGCCTaGCTAGCTAGCATCCTTCACTTCCTCACCTACTTGCGTACTGTG +
Preference number: 6 (lower is better)
Translates to: FFTQTQTQLSHCKNA*LASILHFLTYLRTV
Trigger: CACAGTACGCAAGTAGGTGAGGAAGTGAAGGATGCTAGCTAGCAAGGCATTTTTGCAATGACTTAGTTGGGTTTGGGTTTGAGTAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS TCA 72 bp GGCTCAAAAACAGATTTGCTTGTACTGGTCTCGTGTTaGTTAACAGTTGGGGTTGAAGTAACAGCTGGCATA +
Preference number: 6 (lower is better)
Translates to: GSKTDLLVLVSC*LTVGVEVTAGI
Trigger: TATGCCAGCTGTTACTTCAACCCCAACTGTTAATCAACACGAGACCAGTACAAGCAAATCTGTTTTTGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000517836.5
ENST00000518762.1
ENST00000519253.5
ENST00000524226.5
CDS TCA 72 bp ATCTACTGGATCAGGCATACTGCTAAAGCTTTCCAGTaGTTCTTCATCAAACTGGCGTCTTCTTCCGTTTGT +
Preference number: 6 (lower is better)
Translates to: IYWIRHTAKAFQ*FFIKLASSSVC
Trigger: ACAAACGGAAGAAGACGCCAGTTTGATGAAGAATCACTGGAAAGCTTTAGCAGTATGCCTGATCCAGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000523540.1
ENST00000524226.5
CDS TCA 72 bp GAATACTTTTGCTTGAACAGGCTCTTCAGTCTGGGCTaGATGTCTGTTCCTACTTTTGCAAGGTTCACATGT +
Preference number: 6 (lower is better)
Translates to: EYFCLNRLFSLG*MSVPTFARFTC
Trigger: ACATGTGAACCTTGCAAAAGTAGGAACAGACATTCAGCCCAGACTGAAGAGCCTGTTCAAGCAAAAGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000522777.1
CDS TCA 72 bp CCAGAGGCCACAGGGGGTCTCTTTCAAATCCTACTCTaGCACCAAACTGTAAAAGACAAATATAGTCATTCA +
Preference number: 6 (lower is better)
Translates to: PEATGGLFQILL*HQTVKDKYSHS
Trigger: TGAATGACTATATTTGTCTTTTACAGTTTGGTGTCAGAGTAGGATTTGAAAGAGACCCCCTGTGGCCTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524203.1
CDS GCA 72 bp GGACACACAGAAAAGTTATCATTGGAACTGGCATCTTaGTCTTCTTCCTCCTCTTCATCTGTCCGAACAATT +
Preference number: 6 (lower is better)
Translates to: GHTEKLSLELAS*SSSSSSSVRTI
Trigger: AATTGTTCGGACAGATGAAGAGGAGGAAGAAGAGCAAGATGCCAGTTCCAATGATAACTTTTCTGTGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000518762.1
ENST00000519253.5
ENST00000524226.5
ENST00000524356.1
CDS GCA 72 bp AAAGTTTGTTTACTAAGCAGAGAGGATCCTCAGTCATaGACTGTAACTGTGACAGCAGTGTCCACCATAAAG +
Preference number: 6 (lower is better)
Translates to: KVCLLSREDPQS*TVTVTAVSTIK
Trigger: CTTTATGGTGGACACTGCTGTCACAGTTACAGTGCATGACTGAGGATCCTCTCTGCTTAGTAAACAAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS CAA 72 bp CCGCATGGAACTAGCTTTAGTAATATAATCGCGAATTaGAACAAGCCTGCTTACAATCTGGCTGCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: PHGTSFSNIIAN*NKPAYNLAALH
Trigger: ATGGAGAGCAGCCAGATTGTAAGCAGGCTTGTTCAAATTCGCGATTATATTACTAAAGCTAGTTCCATGCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 72 bp TCATCAACATTCTCATTACTCCAGTTTGGTAAATCCTaGTCATTCATGCCATCTTCAAAGGGACCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SSTFSLLQFGKS*SFMPSSKGPPP
Trigger: AGGAGGAGGTCCCTTTGAAGATGGCATGAATGATCAGGATTTACCAAACTGGAGTAATGAGAATGTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000518537.5
ENST00000518936.5
ENST00000519253.5
ENST00000523055.5
ENST00000524226.5
CDS TCA 72 bp ACATGGGATGGTAGAAACTTCACTTACAGGTTGTTGTaGACTACGATTTTCAATAACGGGAGTTTCTGCACC +
Preference number: 6 (lower is better)
Translates to: TWDGRNFTYRLL*TTIFNNGSFCT
Trigger: GGTGCAGAAACTCCCGTTATTGAAAATCGTAGTTCACAACAACCTGTAAGTGAAGTTTCTACCATCCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519253.5
CDS GCA 72 bp GTTTCTGGCGCTTCATTGCATGCATTTCTGTTAGACTaGTGTAGTATTCTCCTAGCATGTGCTGAAGATATT +
Preference number: 6 (lower is better)
Translates to: VSGASLHAFLLD*CSILLACAEDI
Trigger: AATATCTTCAGCACATGCTAGGAGAATACTACAGCAGTCTAACAGAAATGCATGCAATGAAGCGCCAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522275.5
CDS CAA 72 bp CCCTCCCCAAGTTGCCATCGTTCTCATTATCTACTATaGAAGAATCTTCAGGCTCAAAAACAGATTTGCTTG +
Preference number: 6 (lower is better)
Translates to: PSPSCHRSHYLL*KNLQAQKQICL
Trigger: CAAGCAAATCTGTTTTTGAGCCTGAAGATTCTTCAATAGTAGATAATGAGAACGATGGCAACTTGGGGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518762.1
CDS CAA 90 bp TACCAGCCCCTTGATCGTTTCTCTCTCCCTAAATCCATCAATCCCTaGATTCTTTACTCAAACCCAAACCCAACTAAGTCATTGCAAAAA +
Preference number: 6 (lower is better)
Translates to: YQPLDRFSLPKSINP*ILYSNPNPTKSLQK
Trigger: TTTTTGCAATGACTTAGTTGGGTTTGGGTTTGAGTAAAGAATCAAGGGATTGATGGATTTAGGGAGAGAGAAACGATCAAGGGGCTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS CAA 90 bp AGATCTTGTAACTGTCTAAGTTTCTGTTTTGCAGCCATAAGTCGGTaGATCTTCTGTTCAAATTCAGCATCTTCTGGATGCTCATCAACC +
Preference number: 6 (lower is better)
Translates to: RSCNCLSFCFAAISR*IFCSNSASSGCSST
Trigger: GGTTGATGAGCATCCAGAAGATGCTGAATTTGAACAGAAGATCAACCGACTTATGGCTGCAAAACAGAAACTTAGACAGTTACAAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000517836.5
ENST00000519253.5
ENST00000524226.5
CDS TCA 72 bp CCTCCCCAAGTTGCCATCGTTCTCATTATCTACTATTaGAGAATCTTCAGGCTCAAAAACAGATTTGCTTGT +
Preference number: 6 (lower is better)
Translates to: PPQVAIVLIIYY*RIFRLKNRFAC
Trigger: ACAAGCAAATCTGTTTTTGAGCCTGAAGATTCTTCAATAGTAGATAATGAGAACGATGGCAACTTGGGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518762.1
CDS CCA 72 bp CGCTTTTCTTGTCTTGAATGTTTTAGTCACTGTTGTTaGATCTACTGGATCAGGCATACTGCTAAAGCTTTC +
Preference number: 6 (lower is better)
Translates to: RFSCLECFSHCC*IYWIRHTAKAF
Trigger: GAAAGCTTTAGCAGTATGCCTGATCCAGTAGATCCAACAACAGTGACTAAAACATTCAAGACAAGAAAAGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000523540.1
ENST00000524226.5
CDS CAA 72 bp AACTGTCTAAGTTTCTGTTTTGCAGCCATAAGTCGGTaGATCTTCTGTTCAAATTCAGCATCTTCTGGATGC +
Preference number: 6 (lower is better)
Translates to: NCLSFCFAAISR*IFCSNSASSGC
Trigger: GCATCCAGAAGATGCTGAATTTGAACAGAAGATCAACCGACTTATGGCTGCAAAACAGAAACTTAGACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000517836.5
ENST00000519253.5
ENST00000524226.5
CDS CAA 72 bp CTTGATCGTTTCTCTCTCCCTAAATCCATCAATCCCTaGATTCTTTACTCAAACCCAAACCCAACTAAGTCA +
Preference number: 6 (lower is better)
Translates to: LDRFSLPKSINP*ILYSNPNPTKS
Trigger: TGACTTAGTTGGGTTTGGGTTTGAGTAAAGAATCAAGGGATTGATGGATTTAGGGAGAGAGAAACGATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS TCA 72 bp CTTACATTTTTGGGACCATCATACACCTCAGATGTTTaGGTCTGCTTAACTGTTTCAGTTTCATCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: LTFLGPSYTSDV*VCLTVSVSSLS
Trigger: AGACAAGGATGAAACTGAAACAGTTAAGCAGACTCAAACATCTGAGGTGTATGATGGTCCCAAAAATGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000522275.5
ENST00000524226.5
CDS TCA 72 bp CAGCACTATTTAAAGGTTGCTCATCTTCCAAGATATTaGGGTAACAGGGTTTCACAGGACAGTTATTTTGGT +
Preference number: 6 (lower is better)
Translates to: QHYLKVAHLPRY*GNRVSQDSYFG
Trigger: ACCAAAATAACTGTCCTGTGAAACCCTGTTACCTCAATATCTTGGAAGATGAGCAACCTTTAAATAGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000519802.5
ENST00000522275.5
ENST00000524203.1
CDS TCA 72 bp TTGATCGTTTCTCTCTCCCTAAATCCATCAATCCCTTaGTTCTTTACTCAAACCCAAACCCAACTAAGTCAT +
Preference number: 6 (lower is better)
Translates to: LIVSLSLNPSIP*FFTQTQTQLSH
Trigger: ATGACTTAGTTGGGTTTGGGTTTGAGTAAAGAATCAAGGGATTGATGGATTTAGGGAGAGAGAAACGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS TCA 72 bp GTCTTGGAGGTATCTTTGCAATACCCTTTGGAAGCATaGGCTAACAGTAATAAATCTAACCTTCACTGTTCT +
Preference number: 6 (lower is better)
Translates to: VLEVSLQYPLEA*ANSNKSNLHCS
Trigger: AGAACAGTGAAGGTTAGATTTATTACTGTTAGCTCATGCTTCCAAAGGGTATTGCAAAGATACCTCCAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522777.1
CDS CCA 72 bp GTGAACTTACATTCTACAACACTGACTTTATTCTGCTaGACAGAGAATACCTTTATGTCACTTGCATGTGAC +
Preference number: 6 (lower is better)
Translates to: VNLHSTTLTLFC*TENTFMSLACD
Trigger: GTCACATGCAAGTGACATAAAGGTATTCTCTGTCCAGCAGAATAAAGTCAGTGTTGTAGAATGTAAGTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS GCA 72 bp GGATTTCGAATGTTAGTAACAGGCTCGGAATTTTCATaGTCAGAATCATATTCTGACTCTTCAGTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GFRMLVTGSEFS*SESYSDSSVSS
Trigger: TGAAGAAACTGAAGAGTCAGAATATGATTCTGAGCATGAAAATTCCGAGCCTGTTACTAACATTCGAAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000519253.5
ENST00000524226.5
CDS CAA 72 bp CTTTATTCTGCTGGACAGAGAATACCTTTATGTCACTaGCATGTGACAATGTACTATGCGCTAAAAGTAATG +
Preference number: 6 (lower is better)
Translates to: LYSAGQRIPLCH*HVTMYYALKVM
Trigger: CATTACTTTTAGCGCATAGTACATTGTCACATGCAAGTGACATAAAGGTATTCTCTGTCCAGCAGAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS CAA 90 bp AGAGTTCATGAACAGCCAATTAATAGGAATGTTGTAGGAGAGAACTaGAGATTAAATGGATTTGGAAAGAGAGGCTATCCAGTTATAGGA +
Preference number: 6 (lower is better)
Translates to: RVHEQPINRNVVGEN*RLNGFGKRGYPVIG
Trigger: TCCTATAACTGGATAGCCTCTCTTTCCAAATCCATTTAATCTCAAGTTCTCTCCTACAACATTCCTATTAATTGGCTGTTCATGAACTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517545.5
CDS CAA 90 bp CTCAGGAACAAGAGAGTACAATTTACAATACCTCATTATCTACTATaGAAGAATCTTCAGGCTCAAAAACAGATTTGCTTGTACTGGTCT +
Preference number: 6 (lower is better)
Translates to: LRNKRVQFTIPHYLL*KNLQAQKQICLYWS
Trigger: AGACCAGTACAAGCAAATCTGTTTTTGAGCCTGAAGATTCTTCAATAGTAGATAATGAGGTATTGTAAATTGTACTCTCTTGTTCCTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517836.5
CDS GCA 72 bp AACTGTTCGCCCATCTCTATTATTAGAAACACACTGTaGATTACTATGACTATTTACTTCATTCCAAGTGGA +
Preference number: 6 (lower is better)
Translates to: NCSPISIIRNTL*ITMTIYFIPSG
Trigger: TCCACTTGGAATGAAGTAAATAGTCATAGTAATGCACAGTGTGTTTCTAATAATAGAGATGGGCGAACAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000517730.5
ENST00000519253.5
ENST00000524226.5
CDS CCA 72 bp ACTCATCTTAATGAGTATATTCCAATTCGAAGTATATaGCAGACCTTACATGACCCCAAATCTCTACTAGAA +
Preference number: 6 (lower is better)
Translates to: THLNEYIPIRSI*QTLHDPKSLLE
Trigger: TTCTAGTAGAGATTTGGGGTCATGTAAGGTCTGCCATATACTTCGAATTGGAATATACTCATTAAGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522777.1
CDS CCA 72 bp GTAAATATGTCTTGGAGGTATCTTTGCAATACCCTTTaGAAGCATGAGCTAACAGTAATAAATCTAACCTTC +
Preference number: 6 (lower is better)
Translates to: VNMSWRYLCNTL*KHELTVINLTF
Trigger: GAAGGTTAGATTTATTACTGTTAGCTCATGCTTCCAAAGGGTATTGCAAAGATACCTCCAAGACATATTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522777.1
CDS CAA 72 bp GTCTTCTCATTTCTGACCACAACTCATTATCTACTATaGAAGAATCTTCAGGCTCAAAAACAGATTTGCTTG +
Preference number: 6 (lower is better)
Translates to: VFSFLTTTHYLL*KNLQAQKQICL
Trigger: CAAGCAAATCTGTTTTTGAGCCTGAAGATTCTTCAATAGTAGATAATGAGTTGTGGTCAGAAATGAGAAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000524226.5
CDS TCA 72 bp TCATCAAACTGGCGTCTTCTTCCGTTTGTATCTAATTaGTTTTTGCGGTTACTACTTGTAGATTTTTCTACA +
Preference number: 6 (lower is better)
Translates to: SSNWRLLPFVSN*FLRLLLVDFST
Trigger: TGTAGAAAAATCTACAAGTAGTAACCGCAAAAATCAATTAGATACAAACGGAAGAAGACGCCAGTTTGATGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325083.12
ENST00000519253.5
ENST00000523540.1
ENST00000524226.5