RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCLO (Homo sapiens)

Ensembl gene IDs: ENSG00000186472

Ensembl transcript IDs: ENST00000333891.14, ENST00000413807.6, ENST00000423517.6, ENST00000426442.6, ENST00000432078.2, ENST00000437081.1, ENST00000456006.2, ENST00000461143.1, ENST00000618073.1

Found 1876 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGCTGCTGCCGTGCTTCTTTTTGCTCACTGAGGGGGACCCTGGTTaGCCAGGGCTGGGAACGGAACTGGATCCTGCTGATGTAGGACCT +
Preference number: 1 (lower is better)
Translates to: LLLPCFFLLTEGDPG*PGLGTELDPADVGP
Trigger: AGGTCCTACATCAGCAGGATCCAGTTCCGTTCCCAGCCCTGGGCAACCAGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCAGCAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413807.6
3UTR CCA 90 bp TCTGGCTTGACTGGTCCATCAGACATCACCTTCCTGAGGGCTAGCTaGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCA +
Preference number: 1 (lower is better)
Translates to: SGLTGPSDITFLRAS*LWSWLPLAGGGRLS
Trigger: TGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCTGATGGACCAGTCAAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CCA 90 bp TGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATaGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGCAT +
Preference number: 1 (lower is better)
Translates to: CHWLVEADYQTEFFE*GGLLLCCVCAASWH
Trigger: ATGCCAGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR GCA 90 bp AGCGGTGACTGCTGTAGTGAAACCTTCTGGAGTTCTGCTGCCAACTaGTTAGGATCAACCCCTGGGGATTTCGCCTTATCCACAGCTTTT +
Preference number: 1 (lower is better)
Translates to: SGDCCSETFWSSAAN*LGSTPGDFALSTAF
Trigger: AAAAGCTGTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAGAAGGTTTCACTACAGCAGTCACCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413807.6
3UTR CCA 90 bp ACAACTGATGACAGAACCAGCGGTGACTGCTGTAGTGAAACCTTCTaGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTC +
Preference number: 1 (lower is better)
Translates to: TTDDRTSGDCCSETF*SSAANCLGSTPGDF
Trigger: GAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAGAAGGTTTCACTACAGCAGTCACCGCTGGTTCTGTCATCAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413807.6
3UTR TCA 90 bp TTGGTCAGCTGCAAACTTGGCACACTGGCAGGATCTTATGCTCTCTaGAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTC +
Preference number: 1 (lower is better)
Translates to: LVSCKLGTLAGSYAL*RGMLVHKKKPCCQL
Trigger: GAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAGCATAAGATCCTGCCAGTGTGCCAAGTTTGCAGCTGACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR GCA 90 bp TGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACTCCTaGTATGCTGTGTCTGTGCTGCTTCCTGGCATGATTAGACTGACC +
Preference number: 1 (lower is better)
Translates to: WRQIIRLSSLNGEDS*YAVSVLLPGMIRLT
Trigger: GGTCAGTCTAATCATGCCAGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CCA 90 bp CTGTTGTCAACTCTGCTGATTGACCTAGCCCCATCGCTAGTTCCTTaGAACGGAGGGGCTTCTATAATGGAAAGACTCCTACGCTTTCAG +
Preference number: 1 (lower is better)
Translates to: LLSTLLIDLAPSLVP*NGGASIMERLLRFQ
Trigger: CTGAAAGCGTAGGAGTCTTTCCATTATAGAAGCCCCTCCGTTCCAAGGAACTAGCGATGGGGCTAGGTCAATCAGCAGAGTTGACAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR GCA 90 bp TCTGTGCTGCTTCCTGGCATGATTAGACTGACCGCTTTTATGTGCTaGTGTGGCAGTGTGGGTGAAATGGAAACCCAGAGTATGTATCCT +
Preference number: 1 (lower is better)
Translates to: SVLLPGMIRLTAFMC*CGSVGEMETQSMYP
Trigger: AGGATACATACTCTGGGTTTCCATTTCACCCACACTGCCACAGCAGCACATAAAAGCGGTCAGTCTAATCATGCCAGGAAGCAGCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR GCA 90 bp GTGTCTGTGCTGCTTCCTGGCATGATTAGACTGACCGCTTTTATGTaGTGCTGTGGCAGTGTGGGTGAAATGGAAACCCAGAGTATGTAT +
Preference number: 1 (lower is better)
Translates to: VSVLLPGMIRLTAFM*CCGSVGEMETQSMY
Trigger: ATACATACTCTGGGTTTCCATTTCACCCACACTGCCACAGCAGCACATAAAAGCGGTCAGTCTAATCATGCCAGGAAGCAGCACAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CCA 90 bp TTCCAGTACAACCTAGAAGTTTGGTCAGCTGCAAACTTGGCACACTaGCAGGATCTTATGCTCTCTGAAGGGGAATGCTGGTGCACAAAA +
Preference number: 1 (lower is better)
Translates to: FQYNLEVWSAANLAH*QDLMLSEGECWCTK
Trigger: TTTTGTGCACCAGCATTCCCCTTCAGAGAGCATAAGATCCTGCCAGTGTGCCAAGTTTGCAGCTGACCAAACTTCTAGGTTGTACTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR TCA 90 bp ACATTGCTTTGCTTCCAAACATCACAGACACTGTATCAAATGCTATaGGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAG +
Preference number: 1 (lower is better)
Translates to: TLLCFQTSQTLYQML*ARLDGWWKQRRNSQ
Trigger: CTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTTGATACAGTGTCTGTGATGTTTGGAAGCAAAGCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
3UTR GCA 90 bp ATTGCAACTGGAATGAAGAAAGCTAACTGGTCATACAAACTCTCATaGATACCTATGGATATGAGTGGCTGCAAAAGAGGATCAGAGATG +
Preference number: 1 (lower is better)
Translates to: IATGMKKANWSYKLS*IPMDMSGCKRGSEM
Trigger: CATCTCTGATCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCAGTTAGCTTTCTTCATTCCAGTTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR TCA 90 bp GTTTTTAGGATATTAGCACACACATTAATCAGTAGTGGGAGCACCTaGGCACGTCACCAAACAAATATACAGACACAATCAAACAATAAT +
Preference number: 1 (lower is better)
Translates to: VFRILAHTLISSGST*ARHQTNIQTQSNNN
Trigger: ATTATTGTTTGATTGTGTCTGTATATTTGTTTGGTGACGTGCTCAGGTGCTCCCACTACTGATTAATGTGTGTGCTAATATCCTAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR TCA 90 bp GCTTGCTGCTGCCGTGCTTCTTTTTGCTCACTGAGGGGGACCCTGGTTGCCCAGGCTTTTGGTGGCTCATaGAGTTCCAGATGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: ACCCRASFCSLRGTLVAQAFGGS*SSRCWE
Trigger: TTCCCAGCATCTGGAACTTCATGAGCCACCAAAAGC...CTGGGCAACCAGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCAGCAGCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413807.6
3UTR-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGGTCTTGGTTGCCATTaGCTGGTGGAGGCAGATTAT +
Preference number: 2 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHGLGCH*LVEADY
Trigger: ATAATCTGCCTCCACCAGCCAATGGCAACCAAGACC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CAA 90 bp TTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTaGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LVAIGWWRQIIRLSS*NGEDSCYAVSVLLP
Trigger: AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCATCGCTAGTTCCTTaGAACGGAGGGGCTTCTATA +
Preference number: 2 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPSLVP*NGGASI
Trigger: TATAGAAGCCCCTCCGTTCCAAGGAACTAGCGATGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTATGAGCCAGGTTGGATaGATGGTGGAAACAAAGGAG +
Preference number: 2 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPMSQVG*MVETKE
Trigger: CTCCTTTGTTTCCACCATCCATCCAACCTGGCTCAT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGTGAGCAGAGGATGTTaGAAACTGAAAGCAAACAGG +
Preference number: 2 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTVSRGC*KLKANR
Trigger: CCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCAC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCTCACTTCCAGCCCTaGACACATACTGTAGGTATA +
Preference number: 2 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPHFQP*THTVGI
Trigger: TATACCTACAGTATGTGTCCAGGGCTGGAAGTGAGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTGCTATGAGCCAGGTTaGATGGATGGTGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPCYEPG*MDGGNK
Trigger: TTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTGTGATCCAACAGAATaGACCCAATTGTGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTCDPTE*TQLCSS
Trigger: TGAGGAGCACAATTGGGTCCATTCTGTTGGATCACA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CAA 90 bp TTAAAGATGAGAGCTTTAAATTTGGGGATGTTCTTGCTGTGTGCTTaGAACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCC +
Preference number: 2 (lower is better)
Translates to: LKMRALNLGMFLLCA*NRAFLLTSFWLDWS
Trigger: GGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTTCAAAGCACACAGCAAGAACATCCCCAAATTTAAAGCTCTCATCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAAGCAGCAAGTTGTCTaGATAGAAGACGATGAAGGA +
Preference number: 2 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAKQQVV*IEDDEG
Trigger: TCCTTCATCGTCTTCTATTCAGACAACTTGCTGCTT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR TCA 90 bp CTGGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTATCAATCTGATAGCATATTaGGGTCCAGTCTTACACATA +
Preference number: 2 (lower is better)
Translates to: LEFCCQLLRINPWGFRLINLIAY*GPVLHI
Trigger: TATGTGTAAGACTGGACCTCAATATGCTATCAGATT...GATAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
3UTR-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCAAGGTTCTAGAAGTTaGCTGTTGGTTGCATTATCT +
Preference number: 2 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPQGSRS*LLVALS
Trigger: AGATAATGCAACCAACAGTCAACTTCTAGAACCTTG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR GCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAAGGACACACAACATTaGTTTGCTTCCAAACATCAC +
Preference number: 2 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTKDTQH*FASKHH
Trigger: GTGATGTTTGGAAGCAAAGCAATGTTGTGTGTCCTT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR TCA 90 bp TTCTGGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTAAATCTGATAGCATATTaGGGTCCAGTCTTACACATA +
Preference number: 2 (lower is better)
Translates to: FWSSAANCLGSTPGDFALNLIAY*GPVLHI
Trigger: TATGTGTAAGACTGGACCTCAATATGCTATCAGATT...TAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
3UTR-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTGCTCACCTCCTTCTaGCTTGACTGGTCCATCAGA +
Preference number: 2 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLLTSF*LDWSIR
Trigger: TCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAAGAAAGGCAACAGATaGACATTAAGCTGCCATGCT +
Preference number: 2 (lower is better)
Translates to: KCYEPGWMDGGNKGETASKKGNR*TLSCHA
Trigger: AGCATGGCAGCTTAATGTTCATCTGTTGCCTTTCTT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
3UTR-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTCTCTTCACAGCCATaGGAAATTCAAGGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFSSQP*EIQGLR
Trigger: TCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTATGAAGAAAGCTAACTaGTCATACAAACTCTCATGC +
Preference number: 2 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAMKKAN*SYKLSC
Trigger: GCATGAGAGTTTGTATGACCAGTTAGCTTTCTTCAT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTTGTGGCTAATTTACTaGTTTTATCCATGTCAATCC +
Preference number: 2 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALWLIY*FYPCQS
Trigger: GGATTGACATGGATAAAAGCAGTAAATTAGCCACAA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGAATGGACCCAATTGTaGTCCTCAGTGAGGTTGCAT +
Preference number: 2 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGEWTQL*SSVRLH
Trigger: ATGCAACCTCACTGAGGAGCACAATTGGGTCCATTC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAGAAGGAGATCTCCTTaGACCTTTTCTTCCCCAATT +
Preference number: 2 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGRRRSP*TFSSPI
Trigger: AATTGGGGAAGAAAAGGTCCAAGGAGATCTCCTTCT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGCCAGGTTGGATGGATaGTGGAAACAAAGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: GISPGKLAATCAYNFCILARLDG*WKQRRN
Trigger: GTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
3UTR-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTGGTTGCCATTGGCTaGTGGAGGCAGATTATCAGA +
Preference number: 2 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLVAIG*WRQIIR
Trigger: TCTGATAATCTGCCTCCACCAGCCAATGGCAACCAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTCTTTCTCTGTCAATaGATCGCTCAACAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGFFLCQ*IAQQKG
Trigger: TCCTTTCTGTTGAGCGATGCATTGACAGAGAAAGAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATGCTATGAGCCAGGTTaGATGGATGGTGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: GISPGKLAATCAYNFCILCYEPG*MDGGNK
Trigger: TTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
3UTR-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAACTATAGTCTTGATGTaGGGCTATTTAGAGCAGTTT +
Preference number: 2 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGTIVLM*GYLEQF
Trigger: AAACTGCTCTAAATAGCCTCACATCAAGACTATAGT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAAAGAAAGGCAACAGATaGACATTAAGCTGCCATGCT +
Preference number: 2 (lower is better)
Translates to: GISPGKLAATCAYNFCILKKGNR*TLSCHA
Trigger: AGCATGGCAGCTTAATGTTCATCTGTTGCCTTTCTT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
3UTR-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAGTCCTGAAATGCCATaGCCACAAAAGCACATTAAA +
Preference number: 2 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGSPEMP*PQKHIK
Trigger: TTTAATGTGCTTTTGTGGGCATGGCATTTCAGGACT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAATACAGAAACAAATGTaGTTTTACCACATGGATTCC +
Preference number: 2 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGIQKQM*FYHMDS
Trigger: GGAATCCATGTGGTAAAAGCACATTTGTTTCTGTAT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAAAACTGGTAAAATATaGCCTGAAAGCCACAATTTC +
Preference number: 2 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGKTGKI*PESHNF
Trigger: GAAATTGTGGCTTTCAGGCCATATTTTACCAGTTTT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCTAGAAGTTGACTGTTaGTTGCATTATCTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLEVDC*LHYLLP
Trigger: AGGCAGAAGATAATGCAACCAACAGTCAACTTCTAG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CAA 90 bp ACTGAGATTTGTTACATCAGTCCTTTCCTTTCAACCAAGGCTCCTTaGCATAAAGAATTACCTTTGTGCTGCATGAAAACCACATTAATC +
Preference number: 2 (lower is better)
Translates to: TEICYISPFLSTKAP*HKELPLCCMKTTLI
Trigger: GATTAATGTGGTTTTCATGCAGCACAAAGGTAATTCTTTATGCAAAGGAGCCTTGGTTGAAAGGAAAGGACTGATGTAACAAATCTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTCAGTGAGGTTGCATTaGCTTATCACATATGCTTAT +
Preference number: 2 (lower is better)
Translates to: TCPTHLIHLTTMETRVENSVRLH*LITYAY
Trigger: ATAAGCATATGTGATAAGGCAATGCAACCTCACTGA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCCCACTCTTATGTTTaGCTCTCAAAACTTAGCTTT +
Preference number: 2 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSHSYV*LSKLSF
Trigger: AAAGCTAAGTTTTGAGAGGCAAACATAAGAGTGGGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR GCA 72 bp CCGTGCTTCTTTTTGCTCACTGAGGGGGACCCTGGTTaGCCAGGGCTGGGAACGGAACTGGATCCTGCTGAT +
Preference number: 3 (lower is better)
Translates to: PCFFLLTEGDPG*PGLGTELDPAD
Trigger: ATCAGCAGGATCCAGTTCCGTTCCCAGCCCTGGGCAACCAGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413807.6
3UTR CCA 72 bp ACTGGTCCATCAGACATCACCTTCCTGAGGGCTAGCTaGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: TGPSDITFLRAS*LWSWLPLAGGG
Trigger: GCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCTGATGGACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CCA 72 bp CTGGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCTaGGGATTTCGCCTTATCCACAGCTTTTGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: LEFCCQLLRINP*GFRLIHSFWWL
Trigger: GAGCCACCAAAAGCTGTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
3UTR CCA 72 bp GACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTaGTTGCCATTGGCTGGTGGAGGCAGATTATCAGAC +
Preference number: 3 (lower is better)
Translates to: DITFLRASWLWS*LPLAGGGRLSD
Trigger: GTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CCA 72 bp CCATCAGACATCACCTTCCTGAGGGCTAGCTGGCTTTaGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTA +
Preference number: 3 (lower is better)
Translates to: PSDITFLRASWL*SWLPLAGGGRL
Trigger: TAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CCA 72 bp GACAGAACCAGCGGTGACTGCTGTAGTGAAACCTTCTaGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCT +
Preference number: 3 (lower is better)
Translates to: DRTSGDCCSETF*SSAANCLGSTP
Trigger: AGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAGAAGGTTTCACTACAGCAGTCACCGCTGGTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413807.6
3UTR TCA 72 bp TGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGATTaGCCTAGCCCCATCGCTAGTTCCTTGGAACGGAGG +
Preference number: 3 (lower is better)
Translates to: CTKRSPVVNSAD*PSPIASSLERR
Trigger: CCTCCGTTCCAAGGAACTAGCGATGGGGCTAGGTCAATCAGCAGAGTTGACAACAGGGCTTCTTTTTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR GCA 72 bp TGCTGTAGTGAAACCTTCTGGAGTTCTGCTGCCAACTaGTTAGGATCAACCCCTGGGGATTTCGCCTTATCC +
Preference number: 3 (lower is better)
Translates to: CCSETFWSSAAN*LGSTPGDFALS
Trigger: GGATAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAGAAGGTTTCACTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413807.6
3UTR CCA 72 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATaGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCT +
Preference number: 3 (lower is better)
Translates to: LVEADYQTEFFE*GGLLLCCVCAA
Trigger: AGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR TCA 72 bp TGCAAACTTGGCACACTGGCAGGATCTTATGCTCTCTaGAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: CKLGTLAGSYAL*RGMLVHKKKPC
Trigger: ACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAGCATAAGATCCTGCCAGTGTGCCAAGTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR GCA 72 bp GCACACTGGCAGGATCTTATGCTCTCTGAAGGGGAATaGTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCT +
Preference number: 3 (lower is better)
Translates to: AHWQDLMLSEGE*WCTKRSPVVNS
Trigger: AGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAGCATAAGATCCTGCCAGTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR GCA 72 bp GGTCAGCTGCAAACTTGGCACACTGGCAGGATCTTATaGTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAA +
Preference number: 3 (lower is better)
Translates to: GQLQTWHTGRIL*SLKGNAGAQKE
Trigger: TTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAGCATAAGATCCTGCCAGTGTGCCAAGTTTGCAGCTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR GCA 72 bp CTTCCTGGCATGATTAGACTGACCGCTTTTATGTGCTaGTGTGGCAGTGTGGGTGAAATGGAAACCCAGAGT +
Preference number: 3 (lower is better)
Translates to: LPGMIRLTAFMC*CGSVGEMETQS
Trigger: ACTCTGGGTTTCCATTTCACCCACACTGCCACAGCAGCACATAAAAGCGGTCAGTCTAATCATGCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CCA 72 bp CACTGGCAGGATCTTATGCTCTCTGAAGGGGAATGCTaGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCT +
Preference number: 3 (lower is better)
Translates to: HWQDLMLSEGEC*CTKRSPVVNSA
Trigger: AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAGCATAAGATCCTGCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR CCA 72 bp AACCTAGAAGTTTGGTCAGCTGCAAACTTGGCACACTaGCAGGATCTTATGCTCTCTGAAGGGGAATGCTGG +
Preference number: 3 (lower is better)
Translates to: NLEVWSAANLAH*QDLMLSEGECW
Trigger: CCAGCATTCCCCTTCAGAGAGCATAAGATCCTGCCAGTGTGCCAAGTTTGCAGCTGACCAAACTTCTAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCAGAAGGAGATCTCCTaGGACCTTTTCTTCCCCAAT +
Preference number: 3 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAQKEIS*DLFFPN
Trigger: ATTGGGGAAGAAAAGGTCCAAGGAGATCTCCTTCTG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CAA 90 bp GGGATTTCGCCTTATCCACAGCTTTTGGTGGCTCATGAAGTTCCAGATGCTGGGTTCTGCTTCCCCACTTaGCTGACTAATGATACTCTG +
Preference number: 3 (lower is better)
Translates to: GISPYPQLLVAHEVPDAGFCFPT*LTNDTL
Trigger: CAGAGTATCATTAGTCAGCAAAGTGGGGAAGCAGAA...CCCAGCATCTGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGGCGAAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
3UTR GCA 72 bp TGGCAGGATCTTATGCTCTCTGAAGGGGAATGCTGGTaGACAAAAAGAAGCCCTGTTGTCAACTCTGCTGAT +
Preference number: 3 (lower is better)
Translates to: WQDLMLSEGECW*TKRSPVVNSAD
Trigger: ATCAGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAGCATAAGATCCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR GCA 72 bp CCTTTTTCAACAACTGATGACAGAACCAGCGGTGACTaGTGTAGTGAAACCTTCTGGAGTTCTGCTGCCAAC +
Preference number: 3 (lower is better)
Translates to: PFSTTDDRTSGD*CSETFWSSAAN
Trigger: GTTGGCAGCAGAACTCCAGAAGGTTTCACTACAGCAGTCACCGCTGGTTCTGTCATCAGTTGTTGAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413807.6
3UTR-3UTR CAA 90 bp TTCTGGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTAGAATCTGATAGCATATaGAGGTCCAGTCTTACACAT +
Preference number: 3 (lower is better)
Translates to: FWSSAANCLGSTPGDFALESDSI*RSSLTH
Trigger: ATGTGTAAGACTGGACCTCAATATGCTATCAGATTC...TAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
3UTR-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAAAGGACACACAACATaGCTTTGCTTCCAAACATCA +
Preference number: 3 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTKGHTT*LCFQTS
Trigger: TGATGTTTGGAAGCAAAGCAATGTTGTGTGTCCTTT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR GCA 72 bp ATTATCAGACTGAGTTCTTTGAATGGGGAGGACTCCTaGTATGCTGTGTCTGTGCTGCTTCCTGGCATGATT +
Preference number: 3 (lower is better)
Translates to: IIRLSSLNGEDS*YAVSVLLPGMI
Trigger: AATCATGCCAGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAGTCTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCATATTTTCCCAACATaGATGAACTTGATCACTGTG +
Preference number: 3 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAHIFPT*MNLITV
Trigger: CACAGTGATCAAGTTCATCAATGTTGGGAAAATATG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTTATCTTTCTCAGTTaGGGGAAGATCGAATTTGTA +
Preference number: 3 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVIFLS*GKIEFV
Trigger: TACAAATTCGATCTTCCCCAAACTGAGAAAGATAAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAACAGAATGGACCCAATaGTGCTCCTCAGTGAGGTTG +
Preference number: 3 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGTEWTQ*CSSVRL
Trigger: CAACCTCACTGAGGAGCACAATTGGGTCCATTCTGT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR TCA 72 bp GTGATCCAACAGAATGGACCCAATTGTGCTCCTCAGTaGGGTTGCATTGCCTTATCACATATGCTTATACAT +
Preference number: 3 (lower is better)
Translates to: VIQQNGPNCAPQ*GCIALSHMLIH
Trigger: ATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAATTGGGTCCATTCTGTTGGATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CCA 72 bp GTCATACAAACTCTCATGCATACCTATGGATATGAGTaGCTGCAAAAGAGGATCAGAGATGAGTCAGGGTTT +
Preference number: 3 (lower is better)
Translates to: VIQTLMHTYGYE*LQKRIRDESGF
Trigger: AAACCCTGACTCATCTCTGATCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR GCA 72 bp GGAATGAAGAAAGCTAACTGGTCATACAAACTCTCATaGATACCTATGGATATGAGTGGCTGCAAAAGAGGA +
Preference number: 3 (lower is better)
Translates to: GMKKANWSYKLS*IPMDMSGCKRG
Trigger: TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCAGTTAGCTTTCTTCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGGTGAGCAGAGGATGTaGAAAACTGAAAGCAAACAG +
Preference number: 3 (lower is better)
Translates to: GISPGKLAATCAYNFCILGEQRM*KTESKQ
Trigger: CTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
3UTR-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTGCTCCTCAGTGAGGTaGCATTGCCTTATCACATAT +
Preference number: 3 (lower is better)
Translates to: TCPTHLIHLTTMETRVENCSSVR*HCLITY
Trigger: ATATGTGATAAGGCAATGCAACCTCACTGAGGAGCA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAACACACAACATTGCTTaGCTTCCAAACATCACAGAC +
Preference number: 3 (lower is better)
Translates to: GISPGKLAATCAYNFCILTHNIA*LPNITD
Trigger: GTCTGTGATGTTTGGAAGCAAAGCAATGTTGTGTGT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
3UTR TCA 72 bp ATATTAGCACACACATTAATCAGTAGTGGGAGCACCTaGGCACGTCACCAAACAAATATACAGACACAATCA +
Preference number: 3 (lower is better)
Translates to: ILAHTLISSGST*ARHQTNIQTQS
Trigger: TGATTGTGTCTGTATATTTGTTTGGTGACGTGCTCAGGTGCTCCCACTACTGATTAATGTGTGTGCTAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CAA 90 bp GGTCAGAATAACCATTGTTGTCTCGAGGAACAAGATTTCTTGCTTGGAGAATATATTCCATTCCAATACTaGCATCCTCCAAGGAAACTT +
Preference number: 3 (lower is better)
Translates to: GQNNHCCLEEQDFLLGEYIPFQY*HPPRKL
Trigger: AAGTTTCCTTGGAGGATGCAAGTATTGGAATGGAAT...ATATTCTCCAAGCAAGAAATCTTGTTCCTCGAGACAACAATGGTTATTCTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413807.6
3UTR TCA 72 bp AAAATACAAATCACTGTAGTCAATATATTACGGGACTaGTCTTGGGACTTACATGGTGATGATGAAGTCCTG +
Preference number: 3 (lower is better)
Translates to: KIQITVVNILRD*SWDLHGDDEVL
Trigger: CAGGACTTCATCATCACCATGTAAGTCCCAAGATCAGTCCCGTAATATATTGACTACAGTGATTTGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCAACATTGATGAACTaGATCACTGTGATACTGTCA +
Preference number: 3 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPTLMN*ITVILS
Trigger: TGACAGTATCACAGTGATCAAGTTCATCAATGTTGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGAAGACTACAATTTTTaGCACATGGAAAGCTACCAT +
Preference number: 3 (lower is better)
Translates to: IVLLSEVALPYHICLYIYEDYNF*HMESYH
Trigger: ATGGTAGCTTTCCATGTGCAAAAAATTGTAGTCTTC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CCA 72 bp CTAAAAGAAATTGCAACTGGAATGAAGAAAGCTAACTaGTCATACAAACTCTCATGCATACCTATGGATATG +
Preference number: 3 (lower is better)
Translates to: LKEIATGMKKAN*SYKLSCIPMDM
Trigger: CATATCCATAGGTATGCATGAGAGTTTGTATGACCAGTTAGCTTTCTTCATTCCAGTTGCAATTTCTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGTCCGCCTCGGGGCGTaGAGGCAGCCGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHVRLGA*RQPSPW
Trigger: CCAGGGACTCGGCTGCCTGCACGCCCCGAGGCGGAC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CAA 72 bp GTTCCATCGGTAGGCTTGCTGCTGCCGTGCTTCTTTTaGCTCACTGAGGGGGACCCTGGTTGCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VPSVGLLLPCFF*LTEGDPGCPGL
Trigger: CAGCCCTGGGCAACCAGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCAGCAGCAAGCCTACCGATGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTCCTCCTCCAGCCGCTaGGGCCGCCGCCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASSSSR*GRRQPF
Trigger: GAAGGGCTGGCGGCGGCCGCAGCGGCTGGAGGAGGA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGGGGACGCTTCCCTTaGGCAGCCCCTGCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGGRFP*AAPAPL
Trigger: CAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGTTAGCCCTGAGGGCTaGGCTGGGGGCTTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHVSPEG*AGGFAG
Trigger: GCCTGCAAAGCCCCCAGCTCAGCCCTCAGGGCTAAC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCTCTGGACCAGGCACTaGCGCCCGGAACGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLWTRH*RPERQA
Trigger: TGCCTGGCGTTCCGGGCGGCAGTGCCTGGTCCAGAG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCCTCCTCCAGCCGCTaGGGCCGCCGCCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASSSSSR*GRRQPF
Trigger: GAAGGGCTGGCGGCGGCCGCAGCGGCTGGAGGAGGA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CCATCGGTAGGCTTGCTGCTGCCGTGCTTCTTTTTGCTCACTGAGGGGGACCCTTGCCGTGCTTCTTTTTaGTCACTGAGGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: PSVGLLLPCFFLLTEGDPCRASF*SLRGTL
Trigger: CAGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCA...AGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCAGCAGCAAGCCTACCGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGGTGTGGGGACAGTTTaGCCAGCGGTAGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHGVGTV*PAVGRG
Trigger: CCCACGACCTACCGCTGGCCAAACTGTCCCCACACC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTTAGCCCTGAGGGCTaGGCTGGGGGCTTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVSPEG*AGGFAG
Trigger: GCCTGCAAAGCCCCCAGCTCAGCCCTCAGGGCTAAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGGGGAGAAGCAGATCTaGGCGGTGCCAGCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERGEKQI*AVPAGR
Trigger: GCGCCCGGCTGGCACCGCTCAGATCTGCTTCTCCCC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCCTTGGGCAGCCCCTaGGCCCTTGACATGACAGCG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPLGSP*ALDMTA
Trigger: CGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTCTGCCTCAGGGGGCTaGTTGGCCTTGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHSASGG*LALAEG
Trigger: TCCTTCAGCCAAGGCCAAGCAGCCCCCTGAGGCAGA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGAGGGGGACCCTGGTTaGCCAGGGCTGGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAEGDPG*PGLGTE
Trigger: TTCCGTTCCCAGCCCTGGGCAACCAGGGTCCCCCTC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGAGCAGATCTGAGCGGTaGCAGCCGGGCGCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERSRSER*QPGAVR
Trigger: GCGGACGGCGCCCGGCTGGCACCGCTCAGATCTGCT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTTACTGAGACCAGGTTaGGCTGGACGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLLRPG*AGRPGS
Trigger: GGACCCTGGGCGTCCAGCTCAACCTGGTCTCAGTAA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTGGGCCAGGCAGTTGTaGAGGAGGCTTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTWARQL*RRLCWA
Trigger: GGCCCAACAAAGCCTCCTTCACAACTGCCTGGCCCA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGCAGGTAACGCCCGCTaGCGGTGCCTCCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAAGNAR*RCLLHV
Trigger: AACATGGAGGAGGCACCGGCAGCGGGCGTTACCTGC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTCAAATCCGCCTCCATaGCGGCCGGGATCGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASNPPP*RPGSRC
Trigger: ACACCGCGATCCCGGCCGGCATGGAGGCGGATTTGA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGAGACCAGGTTGAGCTaGACGCCCAGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFETRLS*TPRVRG
Trigger: CCCCCGGACCCTGGGCGTCCAGCTCAACCTGGTCTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGTTGGAGGCTTTGCTaGCCCTGGCTGTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGWRLC*PWLLSW
Trigger: CCAGCTCAACAGCCAGGGCCAGCAAAGCCTCCAACC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCTCAGGGGGCTGCTTaGCCTTGGCTGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPQGAA*PWLKES
Trigger: GCTCTCCTTCAGCCAAGGCCAAGCAGCCCCCTGAGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGGATTTCGCCTTATCCACAGCTTTTGGTGGCTCATGAAGTTCCAGATGCTGGGCTGGTTGCCCAGGGCTaGGAACGGAACTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: GISPYPQLLVAHEVPDAGLVAQG*ERNWIL
Trigger: CAGGATCCAGTTCCGTTCCCAGCCCTGGGCAACCAG...CCCAGCATCTGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGGCGAAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGGAGTGCCATCCTGCTaGAGCGGATCCCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAGVPSC*SGSLPG
Trigger: ACCTGGTAGGGATCCGCTTCAGCAGGATGGCACTCC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGCCAGGGGGTGTTGGTaGCCCTTTTGGCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPARGCW*PFWHWL
Trigger: AAGCCAATGCCAAAAGGGTCACCAACACCCCCTGGC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGTCCGCCTCGGGGCGTaGAGGCAGCCGAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVVRLGA*RQPSPW
Trigger: CCAGGGACTCGGCTGCCTGCACGCCCCGAGGCGGAC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCCCTTGGGCAGCCCCTaGGCCCTTGACATGACAGCG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFPLGSP*ALDMTA
Trigger: CGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGCAGGTGCTGGTGGTaGTTGACCTGTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHCRCWW*LTCGFG
Trigger: CCCAAATCCACAGGTCAAGCACCACCAGCACCTGCA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTCGCCTCGTTGCCCATaGCTCAGGGAGACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFSPRCP*LRETRG
Trigger: GCCCCGAGTCTCCCTGAGCCATGGGCAACGAGGCGA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGTTGTCCCTGGTGGCTaGACTGGGGGTTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPVVPGG*TGGFTV
Trigger: GACAGTGAAACCCCCAGTCCAGCCACCAGGGACAAC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACAGGCTTTGTTGTCCCTaGTGGCTGGACTGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHRLCCP*WLDWGF
Trigger: AAACCCCCAGTCCAGCCACCAGGGACAACAAAGCCT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGGGAGGGGCTGGCTTaGACAAAGAATCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHWEGLA*TKNLPQ
Trigger: CTGAGGCAGATTCTTTGTCCAAGCCAGCCCCTCCCA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTCACCAATGGGGGCCTaGGTTGGGCTAGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTSPMGA*VGLDPG
Trigger: ACCTGGATCTAGCCCAACCCAGGCCCCCATTGGTGA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCTCCCCACACAATACTaGGGTCCTGGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTLPTQY*GPGGGV
Trigger: GACACCACCACCAGGACCCCAGTATTGTGTGGGGAG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCCTGCGCCCTTGACATaGCAGCGGCGATCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERPAPLT*QRRSVS
Trigger: GGAGACAGATCGCCGCTGTCATGTCAAGGGCGCAGG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGTAGCCCAGGTTGTTaGGCTAGGGGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHCSPGC*ARGFGV
Trigger: GACACCAAAACCCCTAGCTCAACAACCTGGGCTACA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCAGATCTTTGGAGGGTaGTCCCAAGGGCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTQIFGG*SQGPTG
Trigger: ACCAGTTGGCCCTTGGGATCACCCTCCAAAGATCTG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCTGCGAGATGGTCCATaGGAACGGAGATGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTLRDGP*ERRWPS
Trigger: AGAAGGCCATCTCCGTTCTCATGGACCATCTCGCAG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGAACGCCCGCTGCCGGTaGCTCCTCCATGTTGGACAG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERNARCR*LLHVGQ
Trigger: CTGTCCAACATGGAGGAGGCACCGGCAGCGGGCGTT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGAGGACTCCTGCTATaGTGTGTCTGTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGGLLL*CVCAAS
Trigger: GGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGGGGACGCTTCCCTTaGGCAGCCCCTGCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGGRFP*AAPAPL
Trigger: CAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGACAGAAGGTTCTTTaGGAGGGGCTGGCTTGGACA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGQKVL*EGLAWT
Trigger: TGTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTAGGGGCTTGTTTCATTaGGGCCCCTGGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPRGLFH*GPWSTL
Trigger: CAAAGTGGACCAGGGGCCCCAATGAAACAAGCCCCT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTCCCCACACAATACTaGGGTCCTGGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALPTQY*GPGGGV
Trigger: GACACCACCACCAGGACCCCAGTATTGTGTGGGGAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCCACTCGTGCCCGTATaGAGGGTGTTCTTATGGTTC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHPLVPV*RVFLWF
Trigger: GAACCATAAGAACACCCTCCATACGGGCACGAGTGG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGTGCTGGTGGTGCTTaGCCTGTGGATTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFGAGGA*PVDLGG
Trigger: GCCACCCAAATCCACAGGTCAAGCACCACCAGCACC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGGGATGTACCAGGAGTaGAGCTGGAAGCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAGMYQE*SWKHAD
Trigger: GTCTGCATGCTTCCAGCTTCACTCCTGGTACATCCC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACAAAGTGATGTCATCTTaGAGGAGCCTTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHKVMSS*RSLALE
Trigger: CTCCAGGGCAAGGCTCCTTCAAGATGACATCACTTT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTCCCTCATGTGTTGCTaGACTTCAGGCAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHSLMCC*TSGNEW
Trigger: CCACTCATTGCCTGAAGTTCAGCAACACATGAGGGA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCCAAGCTCGCCTCGTTaGCCATGGCTCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASPSSPR*PWLRET
Trigger: AGTCTCCCTGAGCCATGGGCAACGAGGCGAGCTTGG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTCCCTACCAGGTCCTTaGTGCTTAGGAATCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPSLPGP*CLGIGL
Trigger: CAAGCCGATTCCTAAGCAGCAAGGACCTGGTAGGGA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCTGGGTTGGAGGCTTTaGTGGCCCTGGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALGWRL*WPWLLS
Trigger: GCTCAACAGCCAGGGCCAGCAAAGCCTCCAACCCAG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCTGGGTTGGAGGCTTTaGTGGCCCTGGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLGWRL*WPWLLS
Trigger: GCTCAACAGCCAGGGCCAGCAAAGCCTCCAACCCAG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTTTGGTGTCCCCACCTaGTGGGTTGGAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAFGVPT*WVGGFA
Trigger: AGCAAAGCCTCCAACCCAGCAGGTGGGGACACCAAA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGGCGATTGGAGGTTTaGTTGGCTCAGGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGRLEV*LAQACG
Trigger: CCCACAGGCCTGAGCCAAGCAAACCTCCAATCGCCC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGGCGATTGGAGGTTTaGTTGGCTCAGGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFGRLEV*LAQACG
Trigger: CCCACAGGCCTGAGCCAAGCAAACCTCCAATCGCCC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAGGAAGGTCTGGACCTaGTGCCACTACTGTATGGCT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTRKVWT*CHYCMA
Trigger: AGCCATACAGTAGTGGCAGCAGGTCCAGACCTTCCT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTATCCACAGCAGAACCAGCGGTGACTaGTGTAGTGAAACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FCCQLLRINPWGFRLIHSRTSGD*CSETFW
Trigger: CCAGAAGGTTTCACTACAGCAGTCACCGCTGGTTCT...GCTGTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGGAGACACTGTTGGTaGCTGCAGAGGTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHWRHCW*LQRFSR
Trigger: TCTGGAAAACCTCTGCAGCCACCAACAGTGTCTCCA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTGCAGCATCCTTCTTTaGGGAAGTCTGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTCSILL*GSLLWL
Trigger: CAGCCACAGCAGACTTCCCCAAAGAAGGATGCTGCA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGGGACTGTTGAGGTGTaGGGACAGTTTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERGTVEV*GQFGQR
Trigger: CCGCTGGCCAAACTGTCCCCACACCTCAACAGTCCC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTGGTTTGGGGGCGATTaGAGGTTTGCTTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAWFGGD*RFAWLR
Trigger: CCTGAGCCAAGCAAACCTCCAATCGCCCCCAAACCA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTTGGTGAAGACTTGTTaGAGTGTGGGGAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHLVKTC*SVGKVG
Trigger: CCCCACTTTCCCCACACTCCAACAAGTCTTCACCAA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACAAAGACCTGGTCACTTaGTATCCTGTATGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHKDLVT*YPVWGL
Trigger: GAGCCCCCATACAGGATACCAAGTGACCAGGTCTTT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGATCTAGGCATTGGCTaGCTATGGTGCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPDLGIG*LWCMAG
Trigger: ACCTGCCATGCACCATAGCCAGCCAATGCCTAGATC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGGCGTTTCTTGTCTTTaGGTGGAGATGTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHGVSCL*VEMWHS
Trigger: TGAGTGCCACATCTCCACCCAAAGACAAGAAACGCC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTTGGGGAGCAGTTCTTaGTCGCTCAATGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTLGSSS*SLNAML
Trigger: CAGCATGGCATTGAGCGACCAAGAACTGCTCCCCAA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTATCCTTAGGATCAACCCCTaGGGATTTCGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: LEFCCQLLRINPWGFRLILRINP*GFRLIH
Trigger: GTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAG...GATAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCTGGTTGCCCAGGGCTaGGAACGGAACTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALVAQG*ERNWIL
Trigger: CAGGATCCAGTTCCGTTCCCAGCCCTGGGCAACCAG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGCTGGCTGCTCTGACTaGAATGAGACTTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHAGCSD*NETCHD
Trigger: ATCATGGCAAGTCTCATTCCAGTCAGAGCAGCCAGC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGCTTTGACTGCGAGATaGTCCATGAGAACGGAGATG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHALTAR*SMRTEM
Trigger: CATCTCCGTTCTCATGGACCATCTCGCAGTCAAAGC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAGGGCTAGCTGGCTTTaGTCTTGGTTGCCATTGGCT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTRASWL*SWLPLA
Trigger: AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCAGCCCCTGCGCCCTTaGCATGACAGCGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVQPLRP*HDSGDL
Trigger: CAGATCGCCGCTGTCATGTCAAGGGCGCAGGGGCTG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACAGCCCCTGCGCCCTTaGCATGACAGCGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGQPLRP*HDSGDL
Trigger: CAGATCGCCGCTGTCATGTCAAGGGCGCAGGGGCTG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGCAGGACCAAGAGGCTaGGCTGGAGGCTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAAGPRG*AGGFVV
Trigger: GACAACAAAGCCTCCAGCTCAGCCTCTTGGTCCTGC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGCAGGACCAAGAGGCTaGGCTGGAGGCTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVAGPRG*AGGFVV
Trigger: GACAACAAAGCCTCCAGCTCAGCCTCTTGGTCCTGC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCCAACTCCAGGAGGCTaGGCTAAAGCCTTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVPTPGG*AKAFGP
Trigger: TGGGCCAAAGGCTTTAGCTCAGCCTCCTGGAGTTGG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGCTGGCCCTGGCTGTTaGGCTGGAGTCTTTCCAACT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASAGPGC*AGVFPT
Trigger: AGTTGGAAAGACTCCAGCTCAACAGCCAGGGCCAGC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCAGTCACGGTCTCTTaGGGAGTTGTAGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPVTVS*GVVGCD
Trigger: ATCACAGCCTACAACTCCTCAAGAGACCGTGACTGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCCCTGGTCCACTTTGTaGATGAGGTCCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFPWSTL*MRSRLA
Trigger: GGCCAACCTGGACCTCATTCACAAAGTGGACCAGGG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGCAGAGAGGACAGGTTaGTTCTGGTTTGGGCGATTT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTAERTG*FWFGRF
Trigger: AAATCGCCCAAACCAGAATCAACCTGTCCTCTCTGC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAGATGCTTTGGGTCCTaGTGGTGCAGGTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTRCFGS*WCRWHF
Trigger: AAAATGCCACCTGCACCATCAGGACCCAAAGCATCT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTCCATTTCTGCAGCCTaGCGTAACTCTTCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPSISAA*RNSSVG
Trigger: TCCGACAGAAGAGTTACGTCAGGCTGCAGAAATGGA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGTAGTTGTTGGAAGCTaGGGAATCACTGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPVVVGS*GITGLG
Trigger: CCCCAAACCAGTGATTCCTCAGCTTCCAACAACTAC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAATTGCCACAACAGCTaGAGCTGTGGTGGTTGCATC +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTNCHNS*SCGGCI
Trigger: GATGCAACCACCACAGCTTCAGCTGTTGTGGCAATT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCGCTCAATGCCATGCTaGCTTTCTATTCGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPRSMPC*LSIRVG
Trigger: ACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGAAAGACCAGCAAGGTaGTCTAAGCTCTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPERPAR*SKLSVP
Trigger: AGGGACAGAGAGCTTAGATCACCTTGCTGGTCTTTC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACAGAGCTTCAGCCTCTTaGGCTTTCAGTCTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHRASAS*AFSLRE
Trigger: TTCCCTAAGACTGAAAGCTCAAGAGGCTGAAGCTCT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACATAGGCTTCACTGTCTaGCATGGCATGTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHIGFTV*HGMLEV
Trigger: GACTTCCAACATGCCATGTCAGACAGTGAAGCCTAT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGCTTTTGGTGGCTCATaGAGTTCCAGATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPAFGGS*SSRCWE
Trigger: TTCCCAGCATCTGGAACTTCATGAGCCACCAAAAGC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTCTTGCTGTGTGCTTTaGACAGGGCCTTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTSCCVL*TGPFCS
Trigger: TGAGCAGAAAGGCCCTGTTCAAAGCACACAGCAAGA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTATCCACAGCTCTTGATCTCCAACCTTaGTCACTGCCATGCCATCTT +
Preference number: 4 (lower is better)
Translates to: SAANCLGSTPGDFALSTALDLQP*SLPCHL
Trigger: AAGATGGCATGGCAGTGATCAAGGTTGGAGATCAAG...AGCTGTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456006.2
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAACGCCCGCTGCCGGTaGCTCCTCCATGTTGGACAG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGNARCR*LLHVGQ
Trigger: CTGTCCAACATGGAGGAGGCACCGGCAGCGGGCGTT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTCCCTACCAGGTCCTTaGTGCTTAGGAATCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASLPGP*CLGIGL
Trigger: CAAGCCGATTCCTAAGCAGCAAGGACCTGGTAGGGA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTCCCCTTACTATGTCTaGCTGTTTAGTCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHSPYYV*LFSLRP
Trigger: AGGCCTCAGACTAAACAGGCAGACATAGTAAGGGGA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGCCTTTGGCCCAGGCTaGTCCGATGAAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVAFGPG*SDEGFS
Trigger: AGAGAAGCCTTCATCGGAGCAGCCTGGGCCAAAGGC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGTAGTGGTAACAGGTaGAGTCTTCAGTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHCSGNR*SLQFGL
Trigger: CAGCCCAAACTGAAGACTGCACCTGTTACCACTACA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGTGAAGCTGGAAGCATaGAGACTCGAAGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPVKLEA*RLEDPS
Trigger: AGAGGGATCTTCGAGTCTGCATGCTTCCAGCTTCAC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGGCCATGTGGTCTGTaGCGAGCTTTGCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGPCGL*RALRCC
Trigger: ACAGCAACGCAAAGCTCGGCACAGACCACATGGCCC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGGGCCATGTGGTCTGTaGCGAGCTTTGCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASGPCGL*RALRCC
Trigger: ACAGCAACGCAAAGCTCGGCACAGACCACATGGCCC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGTTGCAGGCTGCTGTaGTGTGCAGCTCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASCRLL*CAAPSK
Trigger: TTTGGAAGGAGCTGCACAGCACAGCAGCCTGCAACT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCCGTTTGAACTGCTATaGTGGAGACTTTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHPFELL*WRLWKG
Trigger: CCCTTTCCAAAGTCTCCAGCATAGCAGTTCAAACGG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCCTGGAACTTTCGTCTaGTGTTGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTPGTFV*CWTQRL
Trigger: AAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGGAAGGTCTGGACCTaGTGCCACTACTGTATGGCT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSARKVWT*CHYCMA
Trigger: AGCCATACAGTAGTGGCAGCAGGTCCAGACCTTCCT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGTTCTGCTGCCAACTaGTTAGGATCAACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASSAAN*LGSTPG
Trigger: CCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTCGCCTCGTTGCCCATaGCTCAGGGAGACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVSPRCP*LRETRG
Trigger: GCCCCGAGTCTCCCTGAGCCATGGGCAACGAGGCGA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTTGTTTCCTGTGCATaGAAGGCGACTCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLVSCA*KATPQR
Trigger: CCGCTGCGGAGTCGCCTTCCATGCACAGGAAACAAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGGTTTCACTGTCCCTaGTTGTTGAGCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGFHCP*LLSQWL
Trigger: AAGCCATTGGCTCAACAACCAGGGACAGTGAAACCC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCCCCACCTGCTGGGTTaGAGGCTTTGCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVPHLLG*RLCWPW
Trigger: CCAGGGCCAGCAAAGCCTCCAACCCAGCAGGTGGGG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTCTTCAGTTTGGGCTaGGGTGATGACGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVFSLG*GDDGTG
Trigger: TCCAGTTCCGTCATCACCCCAGCCCAAACTGAAGAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTACTTTTTGCAGGTGCTaGTGGTGCTTGACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTTFCRC*WCLTCG
Trigger: TCCACAGGTCAAGCACCACCAGCACCTGCAAAAAGT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTCACCAATGGGGGCCTaGGTTGGGCTAGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPASPMGA*VGLDPG
Trigger: ACCTGGATCTAGCCCAACCCAGGCCCCCATTGGTGA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTAGGTGTGTCAGAGGGTaGGACAGATGTAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPRCVRG*DRCSTF
Trigger: GAAAGTGCTACATCTGTCCCACCCTCTGACACACCT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGACTTGTTGGAGTGTaGGGAAAGTGGGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSARLVGV*GKWGGR
Trigger: CCTACCTCCCCACTTTCCCCACACTCCAACAAGTCT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCCATCAGTGATTCCCTaGGATACGGTGCTATCAGTC +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTPSVIP*DTVLSV
Trigger: GACTGATAGCACCGTATCCCAGGGAATCACTGATGG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTATACTGGGGTCCTGGTaGTGGTGTCATTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTILGSW*WCHSCC
Trigger: ACAGCAAGAATGACACCACCACCAGGACCCCAGTAT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGGCATTGGCTGGCTATaGTGCATGGCAGGTAATGAA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTGIGWL*CMAGNE
Trigger: TTCATTACCTGCCATGCACCATAGCCAGCCAATGCC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCACTCGTGCCCGTATaGAGGGTGTTCTTATGGTTC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPLVPV*RVFLWF
Trigger: GAACCATAAGAACACCCTCCATACGGGCACGAGTGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGACTTTGGGGGATTTaGGTGGGGAAGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGLWGI*VGKEPA
Trigger: AGCTGGCTCCTTCCCCACCCAAATCCCCCAAAGTCC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGGACTTTGGGGGATTTaGGTGGGGAAGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVGLWGI*VGKEPA
Trigger: AGCTGGCTCCTTCCCCACCCAAATCCCCCAAAGTCC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAGAAGGCTGTGGGGTTaGTGTAGGTTGAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTRRLWG*CRLNLR
Trigger: CCTCAAGTTCAACCTACACCAACCCCACAGCCTTCT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCTGATAAGAAGGCTGTaGGGTTGGTGTAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHLIRRL*GWCRLN
Trigger: GTTCAACCTACACCAACCCCACAGCCTTCTTATCAG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTACCGGCGTGTCTCAGTaGTTCGAAGGAGACGGTCTG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASTGVSQ*FEGDGL
Trigger: CAGACCGTCTCCTTCGAACCACTGAGACACGCCGGT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTAAGGATCCTCCATTaGGTCTTCCTCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVRILH*VFLRLH
Trigger: GTGAAGGCGGAGGAAGACCCAATGGAGGATCCTTAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCCATTCCCATTGGCTaGCCAACAGGACTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFAIPIG*PTGLSG
Trigger: CCCACTCAGTCCTGTTGGCCAGCCAATGGGAATGGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCCTGGCCATTCCCATTaGCTGGCCAACAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAPGHSH*LANRTE
Trigger: CTCAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCCTGGCCATTCCCATTaGCTGGCCAACAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERPGHSH*LANRTE
Trigger: CTCAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGTAGTGAAACCTTCTaGAGTTCTGCTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHCSETF*SSAANC
Trigger: GCAGTTGGCAGCAGAACTCCAGAAGGTTTCACTACA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGTCTTGGTTGCCATTaGCTGGTGGAGGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGLGCH*LVEADY
Trigger: ATAATCTGCCTCCACCAGCCAATGGCAACCAAGACC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCCTGCGCCCTTGACATaGCAGCGGCGATCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVPAPLT*QRRSVS
Trigger: GGAGACAGATCGCCGCTGTCATGTCAAGGGCGCAGG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTACTGAGACCAGGTTaGGCTGGACGCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLLRPG*AGRPGS
Trigger: GGACCCTGGGCGTCCAGCTCAACCTGGTCTCAGTAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGCAGGCCCAGGCTGTaGTTTTTCATGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVCRPRL*FFMSRL
Trigger: CAGCCTGGACATGAAAAATCACAGCCTGGGCCTGCA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGGGCCAGGCAGTTGTaGAGGAGGCTTTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGWARQL*RRLCWA
Trigger: GGCCCAACAAAGCCTCCTTCACAACTGCCTGGCCCA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGGTCCACTTTGTGAATaGGGTCCAGGTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASGPLCE*GPGWPA
Trigger: TGCAGGCCAACCTGGACCTCATTCACAAAGTGGACC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGCAGAGAGGACAGGTTaGTTCTGGTTTGGGCGATTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAAERTG*FWFGRF
Trigger: AAATCGCCCAAACCAGAATCAACCTGTCCTCTCTGC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGATGCTTTGGGTCCTaGTGGTGCAGGTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSARCFGS*WCRWHF
Trigger: AAAATGCCACCTGCACCATCAGGACCCAAAGCATCT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGGGCTTTTAGGCTGCTaGGAACTTGAGGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAGLLGC*ELEVSD
Trigger: ATCAGACACCTCAAGTTCTCAGCAGCCTAAAAGCCC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTCATCATGCCATGAGTaGCGTCTTCCTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPSSCHE*RLPASS
Trigger: TGAAGATGCAGGAAGACGTCACTCATGGCATGATGA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGGATGTACCAGGAGTaGAGCTGGAAGCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFGMYQE*SWKHAD
Trigger: GTCTGCATGCTTCCAGCTTCACTCCTGGTACATCCC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTACAGAAGAAGGTGGGTaGTCAAACACGGTTTCGGAT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPTEEGG*SNTVSD
Trigger: ATCCGAAACCGTGTTTGATCACCCACCTTCTTCTGT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACAAGTCCAGATGGAATTaGAGATGGCTTAGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHKSRWN*RWLRRN
Trigger: GTTCCTCCTAAGCCATCTTCAATTCCATCTGGACTT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCAGATCTTTGGAGGGTaGTCCCAAGGGCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAQIFGG*SQGPTG
Trigger: ACCAGTTGGCCCTTGGGATCACCCTCCAAAGATCTG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGACAACACCATTAGATaGCCTCAAAACACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTDNTIR*PQNTPH
Trigger: GTGGGGAGTGTTTTGAGGTCATCTAATGGTGTTGTC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCCCTCACTGTGGTGCTaGAAATGGAGCCAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASPSLWC*KWSQVV
Trigger: CACAACCTGGCTCCATTTTCAGCACCACAGTGAGGG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCGCTCTTCTTCTTGCTaGAAGAGAAGGTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTRSSSC*KRRCCF
Trigger: GAAGCAACACCTTCTCTTTCAGCAAGAAGAAGAGCG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTCTCCTGCCTCATCATaGACTGGGCTTGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVSPASS*TGLAAL
Trigger: AAGAGCGGCAAGCCCAGTTCATGATGAGGCAGGAGA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAATTGCCACAACAGCTaGAGCTGTGGTGGTTGCATC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSANCHNS*SCGGCI
Trigger: GATGCAACCACCACAGCTTCAGCTGTTGTGGCAATT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCGCTGTTCCTTTGGTaGTCTCTCCAATGTCGTCAA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPLFLW*SLQCRQ
Trigger: TTGACGACATTGGAGAGATCACCAAAGGAACAGCGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGCTGGCCAACAGGACTaGGTGGGCTTTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASAGQQD*VGFLLQ
Trigger: CTGAAGAAGAAAGCCCACTCAGTCCTGTTGGCCAGC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGCTTTTGGTGGCTCATaGAGTTCCAGATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAAFGGS*SSRCWE
Trigger: TTCCCAGCATCTGGAACTTCATGAGCCACCAAAAGC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTGCGAGATGGTCCATaGGAACGGAGATGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLRDGP*ERRWPS
Trigger: AGAAGGCCATCTCCGTTCTCATGGACCATCTCGCAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCCAGGTGGGTCTGAGTaGCGCTGGTTTTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAPGGSE*RWFCFD
Trigger: GTCAAAGCAAAACCAGCGTCACTCAGACCCACCTGG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCCAGGTGGGTCTGAGTaGCGCTGGTTTTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFPGGSE*RWFCFD
Trigger: GTCAAAGCAAAACCAGCGTCACTCAGACCCACCTGG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCCAGGTGGGTCTGAGTaGCGCTGGTTTTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASPGGSE*RWFCFD
Trigger: GTCAAAGCAAAACCAGCGTCACTCAGACCCACCTGG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCAGACATCACCTTCCTaGGGGCTAGCTGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFQTSPS*GLAGFG
Trigger: ACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCTG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCGTCTTTTACTTGGTTaGATGCGGAGTTGTTGCACG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPRLLLG*MRSCCT
Trigger: CGTGCAACAACTCCGCATTCAACCAAGTAAAAGACG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACCAAGCTCGCCTCGTTaGCCATGGCTCAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGPSSPR*PWLRET
Trigger: AGTCTCCCTGAGCCATGGGCAACGAGGCGAGCTTGG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAACTCTTGTTTCCTGTaGATGGAAGGCGACTCCGCA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSANSCFL*MEGDSA
Trigger: TGCGGAGTCGCCTTCCATGCACAGGAAACAAGAGTT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCTTGGACAAAGAATCTaGCTCAGGGGGCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERLGQRI*LRGLLG
Trigger: GCCAAGCAGCCCCCTGAGGCAGATTCTTTGTCCAAG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTCTTTGGAGCCACTCTaGCTTCAAGCTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHSLEPL*LQAFLQ
Trigger: CTGAAGAAAAGCTTGAAGGCAGAGTGGCTCCAAAGA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCTTGGCATCCACTCGTaGCCGTATGGAGGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLGIHS*PYGGCS
Trigger: AGAACACCCTCCATACGGGCACGAGTGGATGCCAAG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCTGGAACTTTCGTCTaGTGTTGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPGTFV*CWTQRL
Trigger: AAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGAGGGGGACCCTGGTTaGCCAGGGCTGGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENEGDPG*PGLGTE
Trigger: TTCCGTTCCCAGCCCTGGGCAACCAGGGTCCCCCTC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGAGGGGGACCCTGGTTaGCCAGGGCTGGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILEGDPG*PGLGTE
Trigger: TTCCGTTCCCAGCCCTGGGCAACCAGGGTCCCCCTC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTGCCGTGCTTCTTTTTaGTCACTGAGGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERCRASF*SLRGTL
Trigger: CAGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCACTGCCAAAGCTGCTaGCCGAGGAGCCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVHCQSC*PRSRWT
Trigger: TGTCCACCGGCTCCTCGGGCAGCAGCTTTGGCAGTG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTCTCCCCTGCAGTGCTaGTGCTTCCTTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPASPLQC*CFLHCP
Trigger: TGGACAGTGAAGGAAGCAGCAGCACTGCAGGGGAGA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGGCAGCCGAGTCCCTaGACTCTGGACCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVRQPSP*TLDQAL
Trigger: CAGTGCCTGGTCCAGAGTCCAGGGACTCGGCTGCCT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTCCTCTTCGCTCAGCTaGCTCAAATCCGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPASSSLS*LKSASM
Trigger: CATGGAGGCGGATTTGAGCCAGCTGAGCGAAGAGGA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGGGTTTCACTGTCCCTaGTTGTTGAGCCAATGGCTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAGFHCP*LLSQWL
Trigger: AAGCCATTGGCTCAACAACCAGGGACAGTGAAACCC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCTTTGTTGTCCCTGGTaGCTGGACTGGGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLCCPW*LDWGFH
Trigger: GTGAAACCCCCAGTCCAGCCACCAGGGACAACAAAG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCCCCACCTGCTGGGTTaGAGGCTTTGCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENPHLLG*RLCWPW
Trigger: CCAGGGCCAGCAAAGCCTCCAACCCAGCAGGTGGGG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGAGAGATCCTGTTTTaGTGCAGCATCCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGEILF*CSILLW
Trigger: CCAAAGAAGGATGCTGCACCAAAACAGGATCTCTCC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTACAAGGTCAGTGGTTaGCTTTACCATCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPYKVSG*LYHLGL
Trigger: CAGCCCAAGATGGTAAAGCCAACCACTGACCTTGTA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGTGTGGGGACAGTTTaGCCAGCGGTAGGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGVGTV*PAVGRG
Trigger: CCCACGACCTACCGCTGGCCAAACTGTCCCCACACC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGTGGTGCTTGACCTGTaGATTTGGGTGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAVVLDL*IWVALV
Trigger: CACAAGGGCCACCCAAATCCACAGGTCAAGCACCAC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTGGTGCTTGACCTGTaGATTTGGGTGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFVVLDL*IWVALV
Trigger: CACAAGGGCCACCCAAATCCACAGGTCAAGCACCAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTCTTCCCCTGATCCTTaGCTGTCTTCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHSSPDP*LSSCLY
Trigger: GTATAAACAGGAAGACAGCCAAGGATCAGGGGAAGA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCAAAAGAGGGCCATGTaGTCTGTGCCGAGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAQKRAM*SVPSFA
Trigger: CGCAAAGCTCGGCACAGACCACATGGCCCTCTTTTG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCAAAAGAGGGCCATGTaGTCTGTGCCGAGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASQKRAM*SVPSFA
Trigger: CGCAAAGCTCGGCACAGACCACATGGCCCTCTTTTG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGGTGTGTCAGAGGGTaGGACAGATGTAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSARCVRG*DRCSTF
Trigger: GAAAGTGCTACATCTGTCCCACCCTCTGACACACCT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGGTTTGGGGGCGATTaGAGGTTTGCTTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVWFGGD*RFAWLR
Trigger: CCTGAGCCAAGCAAACCTCCAATCGCCCCCAAACCA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTGGGGTCCTGGTGGTaGTGTCATTCTTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLGSWW*CHSCCG
Trigger: TCCACAGCAAGAATGACACCACCACCAGGACCCCAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTACTGAAAAGGAGCCCTaGAACTTTCGTCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTTEKEP*NFRLLL
Trigger: CAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTGTCCTGGAGAATCTTaGCTCGTGCCATTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSACPGES*LVPLCW
Trigger: CCAACACAATGGCACGAGCCAAGATTCTCCAGGACA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTCTCTGTCTATGTCCTaGAGAATCTTGGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASLSMS*RILARA
Trigger: GGCACGAGCCAAGATTCTCCAGGACATAGACAGAGA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGCTGCCACTACTGTATaGCTTATCCGCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAAATTV*LIRFIL
Trigger: CAGGATGAAGCGGATAAGCCATACAGTAGTGGCAGC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTGAGTGGTCTAGAGTaGACCAATCTTTCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALSGLE*TNLSGS
Trigger: ACTGCCGGAAAGATTGGTCCACTCTAGACCACTCAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGACTTGACCTCTCCCTaGAAGAAGGTACACTTTCAC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPDLTSP*KKVHFH
Trigger: GTGAAAGTGTACCTTCTTCCAGGGAGAGGTCAAGTC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTTGGTTGCCATTGGCTaGTGGAGGCAGATTATCAGA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTLVAIG*WRQIIR
Trigger: TCTGATAATCTGCCTCCACCAGCCAATGGCAACCAA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CAA 72 bp ATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTaGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: IGWWRQIIRLSS*NGEDSCYAVSV
Trigger: CACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCTGCCTGTTTAGTCTaGGGCCTGGATGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASSACLV*GLDASR
Trigger: ACGAGATGCATCCAGGCCTCAGACTAAACAGGCAGA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCCTGGCCCAGGCTGCTaGACTGGAGTCTTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVPGPGC*TGVFVG
Trigger: GCCTACAAAGACTCCAGTTCAGCAGCCTGGGCCAGG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCCGGGTCCTGCCTGTTaGGCTGGAATCTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVPGPAC*AGIFPG
Trigger: GCCAGGAAAGATTCCAGCTCAACAGGCAGGACCCGG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACCGGGTCCTGCCTGTTaGGCTGGAATCTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGPGPAC*AGIFPG
Trigger: GCCAGGAAAGATTCCAGCTCAACAGGCAGGACCCGG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCTACAGACAGTGGTTTaGCACTCAGTGCATGTGTTA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTLQTVV*HSVHVL
Trigger: TAACACATGCACTGAGTGTCAAACCACTGTCTGTAG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGCCAGGGGGTGTTGGTaGCCCTTTTGGCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGARGCW*PFWHWL
Trigger: AAGCCAATGCCAAAAGGGTCACCAACACCCCCTGGC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCCAGTCACGGTCTCTTaGGGAGTTGTAGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVPVTVS*GVVGCD
Trigger: ATCACAGCCTACAACTCCTCAAGAGACCGTGACTGG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACCCTGGTCCACTTTGTaGATGAGGTCCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGPWSTL*MRSRLA
Trigger: GGCCAACCTGGACCTCATTCACAAAGTGGACCAGGG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCAGTCCATCCATTTGTaGCACCAACAGGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAQSIHL*HQQEAQ
Trigger: CTGTGCCTCCTGTTGGTGTCACAAATGGATGGACTG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTACTGCATCAGCCGTATaGATACCAGACAAATCCCTC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSATASAV*IPDKSL
Trigger: GAGGGATTTGTCTGGTATTCATACGGCTGATGCAGT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTGCTGAATGTGGATTaGGTTCCTGTGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVLNVD*VPVEIS
Trigger: GGAGATTTCCACAGGAACTCAATCCACATTCAGCAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGAGACTGTTGAGTGTATaGGGTGGGTGCTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERRLLSV*GGCLGR
Trigger: CCTACCCAAGCACCCACCTCATACACTCAACAGTCT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACATCTGCAGATATGCTTaGTATTGGACTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHICRYA*YWTACH
Trigger: ATGGCAAGCAGTCCAATATCAAGCATATCTGCAGAT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTGGACAACCATGACTTaGCCTCTCCCTGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAWTTMT*PLPGRR
Trigger: CCTTCTTCCAGGGAGAGGTCAAGTCATGGTTGTCCA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTGGACAACCATGACTTaGCCTCTCCCTGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERWTTMT*PLPGRR
Trigger: CCTTCTTCCAGGGAGAGGTCAAGTCATGGTTGTCCA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTCTTCCAGGTGGGTCTaGGTGACGCTGGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERSSRWV*VTLVLL
Trigger: AAGCAAAACCAGCGTCACTCAGACCCACCTGGAAGA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGAGGCTTTGTTGGTTaGATGCGGAGTTGTTGCACG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGGFVG*MRSCCT
Trigger: CGTGCAACAACTCCGCATTCAACCAACAAAGCCTCC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGATCTTATGCTCTCTaGAGGGGAATGCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGSYAL*RGMLVH
Trigger: GTGCACCAGCATTCCCCTTCAGAGAGCATAAGATCC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGCGCCAGGCAACCTTTaGAGAAGACACCTCCCGGAC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGAPGNL*RRHLPD
Trigger: GTCCGGGAGGTGTCTTCTGCAAAGGTTGCCTGGCGC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTCTGGACCAGGCACTaGCGCCCGGAACGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLWTRH*RPERQA
Trigger: TGCCTGGCGTTCCGGGCGGCAGTGCCTGGTCCAGAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATCAAATCCGCCTCCATaGCGGCCGGGATCGCGGTGT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILSNPPP*RPGSRC
Trigger: ACACCGCGATCCCGGCCGGCATGGAGGCGGATTTGA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTCCCCTTACTATGTCTaGCTGTTTAGTCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASPYYV*LFSLRP
Trigger: AGGCCTCAGACTAAACAGGCAGACATAGTAAGGGGA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGCCTTTGGCCCAGGCTaGTCCGATGAAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGAFGPG*SDEGFS
Trigger: AGAGAAGCCTTCATCGGAGCAGCCTGGGCCAAAGGC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTTGTTGGGCCAGTCTaGTGGGCAGAAGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFFVGPV*WAEVFP
Trigger: CGGAAAGACTTCTGCCCAGCAGACTGGCCCAACAAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTCTGCCTCAGGGGGCTaGTTGGCCTTGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVSASGG*LALAEG
Trigger: TCCTTCAGCCAAGGCCAAGCAGCCCCCTGAGGCAGA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGTCTGTGCCGAGCTTTaGGTTGCTGTTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAVCAEL*VAVCSL
Trigger: GAGAGAGCAAACAGCAACGCAAAGCTCGGCACAGAC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGCCTTGTTAGCAGACTaGCATCTACCGATCCATTGT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAALLAD*HLPIHC
Trigger: ACAATGGATCGGTAGATGGCAGTCTGCTAACAAGGC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCAGGCTGCTGTGCTGTaGAGCTCCTTCCAAATGGTA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVQAAVL*SSFQMV
Trigger: TACCATTTGGAAGGAGCTGCACAGCACAGCAGCCTG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGAGTTGCAGGCTGCTGTaGTGTGCAGCTCCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERSCRLL*CAAPSK
Trigger: TTTGGAAGGAGCTGCACAGCACAGCAGCCTGCAACT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAGAGTAGTTGCAGGCTaGTGTGCTGTGCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPARVVAG*CAVQLL
Trigger: AAGGAGCTGCACAGCACAGCAGCCTGCAACTACTCT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAGAGTAGTTGCAGGCTaGTGTGCTGTGCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASRVVAG*CAVQLL
Trigger: AAGGAGCTGCACAGCACAGCAGCCTGCAACTACTCT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCCAACTGGTTCAGTTTaGACAGATATCTCTGCTACC +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTPTGSV*TDISAT
Trigger: GGTAGCAGAGATATCTGTGCAAACTGAACCAGTTGG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCCATTGTGTTGGTTCTaGAGATCCTTCTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTPLCWF*RSFSWK
Trigger: TTTCCAGGAGAAGGATCTGCAGAACCAACACAATGG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGTCATCCATGATGAATaGTATGTCACGGTCATAGCC +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTVIHDE*YVTVIA
Trigger: GGCTATGACCGTGACATAGCATTCATCATGGATGAC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAGTTCTGCTGCCAACTaGTTAGGATCAACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFSSAAN*LGSTPG
Trigger: CCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTAGTTCTGCTGCCAACTaGTTAGGATCAACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVSSAAN*LGSTPG
Trigger: CCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp ACCATTGTTGTCTCGAGGAACAAGATTTCTTGCTTGGAGAATATGTATTATGAGGAGGGGGACCCTGGTTaGCCAGGGCTGGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: TIVVSRNKISCLENMYYEEGDPG*PGLGTE
Trigger: TTCCGTTCCCAGCCCTGGGCAACCAGGGTCCCCCTC...CTCATAATACATATTCTCCAAGCAAGAAATCTTGTTCCTCGAGACAACAATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGGGACTGCTGGCTaGTCTGACTGGAATGAGACT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLGTAG*SDWNET
Trigger: AGTCTCATTCCAGTCAGAGCAGCCAGCAGTCCCCAA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGGGGACTGCTGGCTaGTCTGACTGGAATGAGACT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLGTAG*SDWNET
Trigger: AGTCTCATTCCAGTCAGAGCAGCCAGCAGTCCCCAA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTGGTTTTGCTTTGACTaGGAGATGGTCCATGAGAAC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPWFCFD*EMVHEN
Trigger: GTTCTCATGGACCATCTCGCAGTCAAAGCAAAACCA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTTTTACTTGGTTGAATaGGGAGTTGTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTFYLVE*GVVARQ
Trigger: CTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGAGACCAGGTTGAGCTaGACGCCCAGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLETRLS*TPRVRG
Trigger: CCCCCGGACCCTGGGCGTCCAGCTCAACCTGGTCTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGCATCTCGTTGAAGTaGCAATTTTGCATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHCISLK*QFCMVC
Trigger: ACAGACCATGCAAAATTGCCACTTCAACGAGATGCA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGTCTTCAGTTTGGGCTaGGGTGATGACGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVVFSLG*GDDGTG
Trigger: TCCAGTTCCGTCATCACCCCAGCCCAAACTGAAGAC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCCTCAGGGGGCTGCTTaGCCTTGGCTGAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENPQGAA*PWLKES
Trigger: GCTCTCCTTCAGCCAAGGCCAAGCAGCCCCCTGAGG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCATTGGCTTGGCATCTaGTTTAGGACTCATTTTGGT +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHHWLGI*FRTHFG
Trigger: ACCAAAATGAGTCCTAAACCAGATGCCAAGCCAATG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTAGAGAGATTACTAGGTaGTGTCTTTGGCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPREITR*CLWPFP
Trigger: AGGGAAAGGCCAAAGACACCACCTAGTAATCTCTCT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGTGAAGAGCTATCTGTaGTACAGACCGAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPVKSYL*YRPKKQ
Trigger: CTGTTTCTTCGGTCTGTACCACAGATAGCTCTTCAC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGAGGAATCACTGGTTTaGGGGCGATTGGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAEESLV*GRLEVC
Trigger: GCAAACCTCCAATCGCCCCCAAACCAGTGATTCCTC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGAGGAATCACTGGTTTaGGGGCGATTGGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQEREESLV*GRLEVC
Trigger: GCAAACCTCCAATCGCCCCCAAACCAGTGATTCCTC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACATAGGCCTGTTGGTTTaGGGTGTATATCTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHIGLLV*GVYLLV
Trigger: AACCAACAGATATACACCCCAAACCAACAGGCCTAT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCAGAAACCAGATCTTTaGAGGGTGATCCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERQKPDL*RVIPRA
Trigger: GGCCCTTGGGATCACCCTCCAAAGATCTGGTTTCTG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGATCTAGGCATTGGCTaGCTATGGTGCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPADLGIG*LWCMAG
Trigger: ACCTGCCATGCACCATAGCCAGCCAATGCCTAGATC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCATAGCTCCGATCTGTaGCATCTTCGTCATCCGTTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAHSSDL*HLRHPF
Trigger: AAACGGATGACGAAGATGCCACAGATCGGAGCTATG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCTATGCTGGAGACTTTaGAAAGGGGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLCWRL*KGVWSC
Trigger: ACAAGACCAAACCCCTTTCCAAAGTCTCCAGCATAG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTATGAGGTGGGTGCTTaGGTAGGAAGAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASYEVGA*VGRAGE
Trigger: TTCCCCTGCTCTTCCTACCCAAGCACCCACCTCATA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGCCATTCCCATTGGCTaGCCAACAGGACTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGAIPIG*PTGLSG
Trigger: CCCACTCAGTCCTGTTGGCCAGCCAATGGGAATGGC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGGTGTCTGCAGATATTaGTGGCAGGGGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGGVCRY*WQGSSC
Trigger: GCAGCTGGACCCCTGCCACCAATATCTGCAGACACC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTTCTGGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTCCCCAGGAAGAATCTTaGCAATATAGGCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: LLEFCCQLLRINPWGFRLPQEES*QYRLQF
Trigger: AAATTGGAGCCTATATTGCCAAGATTCTTCCTGGGG...AAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR CCA 90 bp TTCTGGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTAATCCACAGCTTTTGGTaGCTCATGAAGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: FWSSAANCLGSTPGDFALIHSFW*LMKFQM
Trigger: CATCTGGAACTTCATGAGCCACCAAAAGCTGTGGAT...TAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTGCCCGAGGAGCCGGTaGACACAGAGCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVCPRSR*TQSFLQ
Trigger: CTGCAGAAAGCTCTGTGTCCACCGGCTCCTCGGGCA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAGCTGGCTTTGGTCTTaGTTGCCATTGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFSWLWS*LPLAGG
Trigger: TCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCCTGAGGGCTAGCTaGCTTTGGTCTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVFLRAS*LWSWLP
Trigger: TGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTGCTATGAGCCAGGTTaGATGGATGGTGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTCYEPG*MDGGNK
Trigger: TTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCTGCTCACCTCCTTCTaGCTTGACTGGTCCATCAGA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLLTSF*LDWSIR
Trigger: TCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CAA 72 bp TTCCAGTACAACCTAGAAGTTTGGTCAGCTGCAAACTaGGCACACTGGCAGGATCTTATGCTCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: FQYNLEVWSAAN*AHWQDLMLSEG
Trigger: CCCTTCAGAGAGCATAAGATCCTGCCAGTGTGCCAAGTTTGCAGCTGACCAAACTTCTAGGTTGTACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTACTGTCCCTGGTTGTTaGGCCAATGGCTTTGTTAGC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASTVPGC*ANGFVS
Trigger: GCTAACAAAGCCATTGGCTCAACAACCAGGGACAGT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCTGACCCAGTCTGCTaGGCTGGAGGCTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSDPVC*AGGLAG
Trigger: TCCTGCTAAGCCTCCAGCTCAGCAGACTGGGTCAGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATCTGACCCAGTCTGCTaGGCTGGAGGCTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGSDPVC*AGGLAG
Trigger: TCCTGCTAAGCCTCCAGCTCAGCAGACTGGGTCAGA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCCAACTCCAGGAGGCTaGGCTAAAGCCTTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVPTPGG*AKAFGP
Trigger: TGGGCCAAAGGCTTTAGCTCAGCCTCCTGGAGTTGG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGCTGGCCCTGGCTGTTaGGCTGGAGTCTTTCCAACT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVAGPGC*AGVFPT
Trigger: AGTTGGAAAGACTCCAGCTCAACAGCCAGGGCCAGC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTACAGACAGTGGTTTaGCACTCAGTGCATGTGTTA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALQTVV*HSVHVL
Trigger: TAACACATGCACTGAGTGTCAAACCACTGTCTGTAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCTGAAGGAGAGCCATaGAGGGTTGGTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFAEGEP*RVGCFT
Trigger: AGTGAAACAACCAACCCTTCATGGCTCTCCTTCAGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTCCCAGATTCAGACTaGAACGCCTTGACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFFPDSD*NALTAP
Trigger: AGGAGCAGTCAAGGCGTTTCAGTCTGAATCTGGGAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGCCTGGCTGAAGATTaGTGCTCCAAACCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFCLAED*CSKPKE
Trigger: CTCTTTGGGTTTGGAGCATCAATCTTCAGCCAGGCA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAATTTGATGCCTGGCTaGAGATTGATGCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSANLMPG*RLMLQT
Trigger: GGTTTGGAGCATCAATCTTCAGCCAGGCATCAAATT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGTCTCCAAGCTGTCCTaGTATTGCTCTCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERVSKLS*YCSLGL
Trigger: CAAACCCAGAGAGCAATATCAGGACAGCTTGGAGAC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTCTTTAGGTAAACTCTaGGGTGTGCCAGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPSLGKL*GVPDGK
Trigger: TTTACCATCTGGCACACCTCAGAGTTTACCTAAAGA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACACTACTCTCTTCAACTaGATCATAAGGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHTTLFN*IIRLSS
Trigger: AGAAGAGAGCCTTATGATTCAGTTGAAGAGAGTAGT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACCCTCACTGTGGTGCTaGAAATGGAGCCAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGPSLWC*KWSQVV
Trigger: CACAACCTGGCTCCATTTTCAGCACCACAGTGAGGG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCTGTGCCCATTGTGCTaGATGTGGATTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLCPLC*MWIEFL
Trigger: CAGGAACTCAATCCACATTCAGCACAATGGGCACAG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGACAGATCCTTTTCATaGAGGCTAAATGCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSADRSFS*RLNAVL
Trigger: AAGCACCGCATTTAGCCTTCATGAAAAGGATCTGTC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAAATCTGTCACTTCTTaGGACCGGCGTGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASKSVTS*DRRVSV
Trigger: CACTGAGACACGCCGGTCTCAAGAAGTGACAGATTT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGCTGGCCAACAGGACTaGGTGGGCTTTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGAGQQD*VGFLLQ
Trigger: CTGAAGAAGAAAGCCCACTCAGTCCTGTTGGCCAGC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTATAGCCTCGAGTCCGTaGTTCTTCCCTCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVIASSP*FFPHVL
Trigger: CAACACATGAGGGAAGAATCACGGACTCGAGGCTAT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTAAGAAAGGCAACAGATaGACATTAAGCTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPKKGNR*TLSCHA
Trigger: AGCATGGCAGCTTAATGTTCATCTGTTGCCTTTCTT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTTTCAAATGCCAAAATaGCACCACATGCACAGCACT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTFQMPK*HHMHST
Trigger: AGTGCTGTGCATGTGGTGTCATTTTGGCATTTGAAA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTCTTTGGGGAAGTCTaGTGTGGCTGTGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFFGEV*CGCGDD
Trigger: ATCATCCCCACAGCCACAGCAGACTTCCCCAAAGAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTCTTTGGGGAAGTCTaGTGTGGCTGTGGGGATGAT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFFFGEV*CGCGDD
Trigger: ATCATCCCCACAGCCACAGCAGACTTCCCCAAAGAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGATCAGGTTTTGCTGTaGATGGTGGCTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFDQVLL*MVAVAV
Trigger: AACAGCCACAGCCACCATGCACAGCAAAACCTGATC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTGACCTTCCAAAATTaGCTGCTCTGTAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALTFQN*LLCSGL
Trigger: CAAACCACTACAGAGCAGGCAATTTTGGAAGGTCAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTCAGACATAGAACGCTaGATCATCTTGGCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPSDIER*IILAVL
Trigger: TAAGACAGCCAAGATGATGCAGCGTTCTATGTCTGA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTATCCGTAGAAACAGGTaGTATCATAAGGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPIRRNR*YHKGLV
Trigger: AACCAACCCCTTATGATAGCACCTGTTTCTACGGAT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTCATCCATGATGAATaGTATGTCACGGTCATAGCC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVIHDE*YVTVIA
Trigger: GGCTATGACCGTGACATAGCATTCATCATGGATGAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAGAACCAGCGGTGACTaGTGTAGTGAAACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASRTSGD*CSETFW
Trigger: CCAGAAGGTTTCACTACAGCAGTCACCGCTGGTTCT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGCCGTGCTTCTTTTTaGTCACTGAGGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGCRASF*SLRGTL
Trigger: CAGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGCTATGGCAGCCCCTaGATCTTCCAGGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSYGSP*IFQVGL
Trigger: CAGACCCACCTGGAAGATGCAGGGGCTGCCATAGCT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGACACAGAGCTTTCTaGAGGCCGGTGATTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGHRAF*RPVIGR
Trigger: CCTCCCAATCACCGGCCTGCAGAAAGCTCTGTGTCC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCAAAATGACACCACATaGACAGCACTAAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTQNDTT*TALKGF
Trigger: AAACCCCTTTAGTGCTGTGCATGTGGTGTCATTTTG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTACCGCTTTTATGTGCTaGTGTGGCAGTGTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVTAFMC*CGSVGE
Trigger: TTCACCCACACTGCCACAGCAGCACATAAAAGCGGT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAGGCAGCCGAGTCCCTaGACTCTGGACCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYRQPSP*TLDQAL
Trigger: CAGTGCCTGGTCCAGAGTCCAGGGACTCGGCTGCCT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTTGTTTCCTGTGCATaGAAGGCGACTCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLVSCA*KATPQR
Trigger: CCGCTGCGGAGTCGCCTTCCATGCACAGGAAACAAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCCACTTTTTGTTTCTTaGTGGTTTCTTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTPLFVS*WFLPGM
Trigger: CATCCCAGGAAGAAACCACCAAGAAACAAAAAGTGG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGAAGATATTGATTTaGGAGTGCCATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTEKILI*ECHPAE
Trigger: TTCAGCAGGATGGCACTCCCAAATCAATATCTTCTC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAACCAAGAGGCTGAGCTaGAGGCTTTGTTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGTKRLS*RLCCPW
Trigger: CCAGGGACAACAAAGCCTCCAGCTCAGCCTCTTGGT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCCCAGTCTGCTGAGCTaGAGGCTTAGCAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVPSLLS*RLSRTK
Trigger: CTTGGTCCTGCTAAGCCTCCAGCTCAGCAGACTGGG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCCTGCCTGTTGAGCTaGAATCTTTCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSCLLS*NLSWPR
Trigger: CCTGGGCCAGGAAAGATTCCAGCTCAACAGGCAGGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAGATGGAGACACTGTTaGTGGCTGCAGAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFRWRHC*WLQRFS
Trigger: GGAAAACCTCTGCAGCCACCAACAGTGTCTCCATCT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGGGAGGGGCTGGCTTaGACAAAGAATCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGWEGLA*TKNLPQ
Trigger: CTGAGGCAGATTCTTTGTCCAAGCCAGCCCCTCCCA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTGCTCCTGAGGCTTTaGGGACTGTTGAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLLLRL*GLLRCG
Trigger: CCCACACCTCAACAGTCCCCAAAGCCTCAGGAGCAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCTTGGCTTTCTTCACTaGGTCCTTTTCAGATATAAG +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHLGFLH*VLFRYK
Trigger: CTTATATCTGAAAAGGACCCAGTGAAGAAAGCCAAG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAGAACTTCTAAAGAATaGGCGAGGTTTAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTRTSKE*ARFSWK
Trigger: CTTCCAGCTAAACCTCGCCCATTCTTTAGAAGTTCT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAGGTCACTGTCTCAGTaGCCAGAGATACAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPARSLSQ*PEIQES
Trigger: TGACTCCTGTATCTCTGGCCACTGAGACAGTGACCT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGACTTGTCGTGTTTCTaGATATGGACCTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPDLSCF*IWTCSL
Trigger: AAGACTACAGGTCCATATCCAGAAACACGACAAGTC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACTGGGGTCCTGGTGGTaGTGTCATTCTTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLGSWW*CHSCCG
Trigger: TCCACAGCAAGAATGACACCACCACCAGGACCCCAG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTATACTGGGGTCCTGGTaGTGGTGTCATTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAILGSW*WCHSCC
Trigger: ACAGCAAGAATGACACCACCACCAGGACCCCAGTAT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGCTGGCTATGGTGCATaGCAGGTAATGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVAGYGA*QVMKSL
Trigger: CAGTGACTTCATTACCTGCCATGCACCATAGCCAGC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTATGCTGTGGTTAAAGTaGGAACAGAGTCTATCGTCT +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTMLWLK*EQSLSS
Trigger: AGACGATAGACTCTGTTCCCACTTTAACCACAGCAT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTGCCTCATCATGAACTaGGCTTGCCGCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPACLIMN*ACRSSS
Trigger: AGAAGAAGAGCGGCAAGCCCAGTTCATGATGAGGCA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGCCTCATCATGAACTaGGCTTGCCGCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFCLIMN*ACRSSS
Trigger: AGAAGAAGAGCGGCAAGCCCAGTTCATGATGAGGCA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTCTTCATCATCAGTTTaGACGCTTGTATCCACACTC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPSSSSV*TLVSTL
Trigger: GAGTGTGGATACAAGCGTCCAAACTGATGATGAAGA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTGGAGGGTGTTCTTATaGTTCCAACTGGTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPWRVFL*FQLVQF
Trigger: AAACTGAACCAGTTGGAACCATAAGAACACCCTCCA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGAGCCAGCTGTACTGTaGAATCTGCCCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVEPAVL*NLPGGE
Trigger: CTCACCTCCGGGCAGATTCCACAGTACAGCTGGCTC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGCAGATCCTTCTCCTaGAAACTGTGCCCATTGTGC +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVCRSFS*KLCPLC
Trigger: GCACAATGGGCACAGTTTCCAGGAGAAGGATCTGCA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGTCCTGGAGAATCTTaGCTCGTGCCATTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVCPGES*LVPLCW
Trigger: CCAACACAATGGCACGAGCCAAGATTCTCCAGGACA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCTCTGTCTATGTCCTaGAGAATCTTGGCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASSLSMS*RILARA
Trigger: GGCACGAGCCAAGATTCTCCAGGACATAGACAGAGA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAGAAGGCTGTGGGGTTaGTGTAGGTTGAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPARRLWG*CRLNLR
Trigger: CCTCAAGTTCAACCTACACCAACCCCACAGCCTTCT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTCTGCAGATATTGGTaGCAGGGGTCCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVCRYW*QGSSCS
Trigger: GCTGCAGCTGGACCCCTGCCACCAATATCTGCAGAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCAAACGAGACTCCCTaGGTTTATCAAACCAATCTG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPNETP*VYQTNL
Trigger: CAGATTGGTTTGATAAACCCAGGGAGTCTCGTTTGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCTTAGGATCAACCCCTaGGGATTTCGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALRINP*GFRLIH
Trigger: GTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCTTAGGATCAACCCCTaGGGATTTCGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLRINP*GFRLIH
Trigger: GTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACTGGTTGCCCAGGGCTaGGAACGGAACTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILLVAQG*ERNWIL
Trigger: CAGGATCCAGTTCCGTTCCCAGCCCTGGGCAACCAG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGCTGGCTGCTCTGACTaGAATGAGACTTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERAGCSD*NETCHD
Trigger: ATCATGGCAAGTCTCATTCCAGTCAGAGCAGCCAGC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGCTTTGACTGCGAGATaGTCCATGAGAACGGAGATG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASALTAR*SMRTEM
Trigger: CATCTCCGTTCTCATGGACCATCTCGCAGTCAAAGC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGTCAGCTGCAAACTTaGCACACTGGCAGGATCTTA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGQLQT*HTGRIL
Trigger: TAAGATCCTGCCAGTGTGCCAAGTTTGCAGCTGACC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCTCAGCACCTCTCCCTaGAAGAAGGTACACTTTCAC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERLSTSP*KKVHFH
Trigger: GTGAAAGTGTACCTTCTTCCAGGGAGAGGTGCTGAG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618073.1
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTCCGGGGGTCTTCCTaGTTGCTTTGGAGGATGACT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVRGSS*LLWRMT
Trigger: AGTCATCCTCCAAAGCAATCAGGAAGACCCCCGGAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGGATGCCTCAGAGTCTaGTATCAAATCAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAGCLRV*YQIKRV
Trigger: AACCCTTTTGATTTGATATCAGACTCTGAGGCATCC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGGAGTGCCATCCTGCTaGAGCGGATCCCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYGVPSC*SGSLPG
Trigger: ACCTGGTAGGGATCCGCTTCAGCAGGATGGCACTCC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGTCTGGGTAGGACCCTaGATTGGCTTTCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGVWVGP*IGFPVP
Trigger: AGGTACAGGAAAGCCAATTCAGGGTCCTACCCAGAC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTTGCATGGTCTGTCTaGGGAGTCTGGGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVFAWSV*GVWVGP
Trigger: GGGTCCTACCCAGACTCCTCAGACAGACCATGCAAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGTAGCCCAGGTTGTTaGGCTAGGGGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGCSPGC*ARGFGV
Trigger: GACACCAAAACCCCTAGCTCAACAACCTGGGCTACA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCCTGGCCCAGGCTGCTaGACTGGAGTCTTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYPGPGC*TGVFVG
Trigger: GCCTACAAAGACTCCAGTTCAGCAGCCTGGGCCAGG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGGTTTTGTAGATTGCTaGGCCGAGGGCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVGFVDC*AEGFAG
Trigger: CCCAGCAAAGCCCTCGGCTCAGCAATCTACAAAACC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGTCCACTTTGTGAATaGGGTCCAGGTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGPLCE*GPGWPA
Trigger: TGCAGGCCAACCTGGACCTCATTCACAAAGTGGACC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTCTTTAGGTAAACTCTaGGGTGTGCCAGATGGTAAA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASLGKL*GVPDGK
Trigger: TTTACCATCTGGCACACCTCAGAGTTTACCTAAAGA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGACCGAAGAAACAGATaGTGTGAGAGAAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASDRRNR*CERRCV
Trigger: GACACACCTTCTCTCACATCATCTGTTTCTTCGGTC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCAGGGTAGTAATGGGTaGAGAGCTATCTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVQGSNG*RAICGT
Trigger: TGTACCACAGATAGCTCTTCACCCATTACTACCCTG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGATGCAGGTTTTTCCTaGCCAAAGGTCTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPADAGFS*PKVSPD
Trigger: ATCTGGAGAGACCTTTGGTCAGGAAAAACCTGCATC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGATGCAGGTTTTTCCTaGCCAAAGGTCTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFDAGFS*PKVSPD
Trigger: ATCTGGAGAGACCTTTGGTCAGGAAAAACCTGCATC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTTTGGAAAATCTTGGTaGAGACTTGTTGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAFGKSW*RLVGVW
Trigger: CCACACTCCAACAAGTCTTCACCAAGATTTTCCAAA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCAACTGGTAATTGCTTaGCTAGCAGAAGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPQLVIA*LAEESV
Trigger: AACAGATTCTTCTGCTAGTCAAGCAATTACCAGTTG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTACTTCCCCATCAGTaGTTCCCTGGGATACGGTGC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLLPHQ*FPGIRC
Trigger: GCACCGTATCCCAGGGAATCACTGATGGGGAAGTAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTTTGGTCATCACACTTaGAGTAGACTCATCCATTGT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPFGHHT*SRLIHC
Trigger: ACAATGGATGAGTCTACTTCAAGTGTGATGACCAAA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACACTTTTTCTGAACCATaGTCTTTTCTTGTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHTFSEP*SFLVLG
Trigger: TCCGAGAACAAGAAAAGATCATGGTTCAGAAAAAGT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCTCCTGCCTCATCATaGACTGGGCTTGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSPASS*TGLAAL
Trigger: AAGAGCGGCAAGCCCAGTTCATGATGAGGCAGGAGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGAATCTGCTTCTGTTTaGCATCCTAAACTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERESASV*HPKLPP
Trigger: AGGGGGCAGTTTAGGATGTCAAACAGAAGCAGATTC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGTGCTGAATGTGGATTaGGTTCCTGTGGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASVLNVD*VPVEIS
Trigger: GGAGATTTCCACAGGAACTCAATCCACATTCAGCAC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGTTGAACTTGAGGTGTaGAGGACATTGTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERVELEV*RTLLPQ
Trigger: CTGTGGCAACAATGTCCTTCACACCTCAAGTTCAAC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTATTCTTCCTCTACTTTaGCTAATTGGCAAACTGGTC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPILPLL*LIGKLV
Trigger: GACCAGTTTGCCAATTAGTCAAAGTAGAGGAAGAAT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCAGTGTTTTCTTCTTaGGCTGTTCCATGGAAATAC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPVFSS*AVPWKY
Trigger: GTATTTCCATGGAACAGCTCAAGAAGAAAACACTGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTGCGAGATGGTCCATaGGAACGGAGATGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLRDGP*ERRWPS
Trigger: AGAAGGCCATCTCCGTTCTCATGGACCATCTCGCAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCTTCCAGGTGGGTCTaGGTGACGCTGGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSSRWV*VTLVLL
Trigger: AAGCAAAACCAGCGTCACTCAGACCCACCTGGAAGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTTTCTGCAGGCCGGTaGTTGGGAGGCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLSAGR*LGGFVG
Trigger: ACCAACAAAGCCTCCCAATCACCGGCCTGCAGAAAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCGTCTTTTACTTGGTTaGATGCGGAGTTGTTGCACG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFRLLLG*MRSCCT
Trigger: CGTGCAACAACTCCGCATTCAACCAAGTAAAAGACG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTACTGGTAGGCTAACTTaGACTGTGAGCAATTTAAAC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPTGRLT*TVSNLN
Trigger: GTTTAAATTGCTCACAGTTCAAGTTAGCCTACCAGT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATTTGGTGTCCCCACCTaGTGGGTTGGAGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGFGVPT*WVGGFA
Trigger: AGCAAAGCCTCCAACCCAGCAGGTGGGGACACCAAA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTTGTTGGGCCAGTCTaGTGGGCAGAAGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGFVGPV*WAEVFP
Trigger: CGGAAAGACTTCTGCCCAGCAGACTGGCCCAACAAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGAGATCCTGTTTTGGTaGAGCATCCTTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQEREILFW*SILLWG
Trigger: TCCCCAAAGAAGGATGCTGCACCAAAACAGGATCTC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTTGGACAAAGAATCTaGCTCAGGGGGCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLGQRI*LRGLLG
Trigger: GCCAAGCAGCCCCCTGAGGCAGATTCTTTGTCCAAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGACAGGGGCCTTGTCCTaGTCAGATGGGACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVTGALS*SDGTEG
Trigger: ACCTTCTGTCCCATCTGAGCAGGACAAGGCCCCTGT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTGCAGGTGCTGGTGGTaGTTGACCTGTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVCRCWW*LTCGFG
Trigger: CCCAAATCCACAGGTCAAGCACCACCAGCACCTGCA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCACAGGTATACTTTTTaGAGGTGCTGGTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASHRYTF*RCWWCL
Trigger: CAAGCACCACCAGCACCTGCAAAAAGTATACCTGTG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCTGCATCTTCATCAATaGTTGTGCTACTTTTTCGAG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLHLHQ*LCYFFE
Trigger: CTCGAAAAAGTAGCACAAGCATTGATGAAGATGCAG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTGCCGAGCTTTGCGTTaGTGTTTGCTCTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPACRALR*CLLSPF
Trigger: AAAAGGAGAGAGCAAACAGCAACGCAAAGCTCGGCA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCTCTTCTGTCGGAGATaGATCTTCAATGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLFCRR*IFNGRE
Trigger: CTCTCTCCCATTGAAGATGCATCTCCGACAGAAGAG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCCTTGTTAGCAGACTaGCATCTACCGATCCATTGT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFALLAD*HLPIHC
Trigger: ACAATGGATCGGTAGATGGCAGTCTGCTAACAAGGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCATTTTCTTCTTCTTaGCTTGTTAGCAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPFSSS*LVSRLP
Trigger: TGGCAGTCTGCTAACAAGGCAAGAAGAAGAAAATGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGGGATAGAGAGTGTTaGACTGCTGGTCGAATCTGT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVWDREC*TAGRIC
Trigger: ACAGATTCGACCAGCAGTGCAACACTCTCTATCCCA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTCCCTGGGATACGGTaGTATCAGTCCATCCATTTG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERFPGIR*YQSIHL
Trigger: CAAATGGATGGACTGATAGCACCGTATCCCAGGGAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTTGCACAGATATCTCTaGTACCGTTTGAACTGCTAT +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLHRYL*YRLNCY
Trigger: ATAGCAGTTCAAACGGTAGCAGAGATATCTGTGCAA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTTGGCATCCACTCGTaGCCGTATGGAGGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLGIHS*PYGGCS
Trigger: AGAACACCCTCCATACGGGCACGAGTGGATGCCAAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGAGAATCTTGGCTCGTaGCATTGTGTTGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAENLGS*HCVGSA
Trigger: TGCAGAACCAACACAATGGCACGAGCCAAGATTCTC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTCGGGTTGGTCTTGTaGTACTCACTTCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFGLVL*YSLHCQ
Trigger: CTGACAGTGAAGTGAGTAGCACAAGACCAACCCGAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTTGATAAAGTATGGCTaGTGGCAGTTGTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALIKYG*WQLFCC
Trigger: GCAGCAAAACAACTGCCAGCAGCCATACTTTATCAA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGGTATTTCCTAATGTaGCCAGTCCTGTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASWYFLM*PVLCQE
Trigger: CTCTTGGCACAGGACTGGGCACATTAGGAAATACCA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTATCCGCTTCATCCTaGAGAGCTGAGCGTATGGTA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALSASS*RAERMV
Trigger: TACCATACGCTCAGCTCTGCAGGATGAAGCGGATAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTGATCCCTGGTGTCTaGAGATATTGGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLIPGV*RYWWQG
Trigger: CCCCTGCCACCAATATCTGCAGACACCAGGGATCAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAACCTTCTGGAGTTCTaGTGCCAACTGCTTAGGATC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASNLLEF*CQLLRI
Trigger: GATCCTAAGCAGTTGGCAGCAGAACTCCAGAAGGTT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATGCCGTGCTTCTTTTTaGTCACTGAGGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGCRASF*SLRGTL
Trigger: CAGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTCAATGGTGGGAACCTaGATGTCCTTTGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERSMVGT*MSFDGS
Trigger: TGACCCATCAAAGGACATGCAGGTTCCCACCATTGA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCAATGGTGGGAACCTaGATGTCCTTTGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASSMVGT*MSFDGS
Trigger: TGACCCATCAAAGGACATGCAGGTTCCCACCATTGA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAAGCTATGGCAGCCCCTaGATCTTCCAGGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILSYGSP*IFQVGL
Trigger: CAGACCCACCTGGAAGATGCAGGGGCTGCCATAGCT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTATGGATATGAGTGGCTaGAAAAGAGGATCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAMDMSG*KRGSEM
Trigger: CATCTCTGATCCTCTTTTGCAGCCACTCATATCCAT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTACTGGCAGGATCTTATaGTCTCTGAAGGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPATGRIL*SLKGNA
Trigger: AGCATTCCCCTTCAGAGAGCATAAGATCCTGCCAGT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGGTTTTCCAGGAGTTaGTTGCTGAATAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSARFSRS*LLNRWF
Trigger: AAACCACCTATTCAGCAACCAACTCCTGGAAAACCT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTTTGTTGTCCCTGGTaGCTGGACTGGGGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLCCPW*LDWGFH
Trigger: GTGAAACCCCCAGTCCAGCCACCAGGGACAACAAAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCCCAGTCTGCTGAGCTaGAGGCTTAGCAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENPSLLS*RLSRTK
Trigger: CTTGGTCCTGCTAAGCCTCCAGCTCAGCAGACTGGG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAGCTGGAATCTTTCCTaGCCCAGGCTGCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVSWNLS*PRLLNW
Trigger: CCAGTTCAGCAGCCTGGGCCAGGAAAGATTCCAGCT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAGCTGGAATCTTTCCTaGCCCAGGCTGCTGAACTGG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGSWNLS*PRLLNW
Trigger: CCAGTTCAGCAGCCTGGGCCAGGAAAGATTCCAGCT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGGGGCTGCTTGGCCTTaGCTGAAGGAGAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENGAAWP*LKESHE
Trigger: TTCATGGCTCTCCTTCAGCCAAGGCCAAGCAGCCCC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACTGCTCCTGAGGCTTTaGGGACTGTTGAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILLLLRL*GLLRCG
Trigger: CCCACACCTCAACAGTCCCCAAAGCCTCAGGAGCAG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGGTTGATTCTGGTTTaGGCGATTTCTCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSARLILV*AISPVL
Trigger: CAAAACTGGAGAAATCGCCCAAACCAGAATCAACCT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTCTTGCACTGTCTTTaGAGCCACTCTGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFLHCL*SHSAFK
Trigger: CTTGAAGGCAGAGTGGCTCCAAAGACAGTGCAAGAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTCTTGCACTGTCTTTaGAGCCACTCTGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERFLHCL*SHSAFK
Trigger: CTTGAAGGCAGAGTGGCTCCAAAGACAGTGCAAGAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTTTATGGTCCTTGCTaGAAGGAATATCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALYGPC*KEYLVG
Trigger: GCCAACAAGATATTCCTTCCAGCAAGGACCATAAAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAGGTCCACTATCTCATaGCTTTCTGGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTRSTIS*LSGMIK
Trigger: TTTTATCATCCCAGAAAGCCATGAGATAGTGGACCT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCTTGGCTCAGGCCTGTaGGTAAATACAAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALGSGL*VNTSPD
Trigger: ATCTGGACTTGTATTTACCCACAGGCCTGAGCCAAG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCTTGGCTCAGGCCTGTaGGTAAATACAAGTCCAGAT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLGSGL*VNTSPD
Trigger: ATCTGGACTTGTATTTACCCACAGGCCTGAGCCAAG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACAGAAACCAGATCTTTaGAGGGTGATCCCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGQKPDL*RVIPRA
Trigger: GGCCCTTGGGATCACCCTCCAAAGATCTGGTTTCTG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTGTTGTAAGTTGGAGTaGTGTTGTCATTGCATGTTC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPCCKLE*CCHCMF
Trigger: GAACATGCAATGACAACACCACTCCAACTTACAACA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGACTTGTCGTGTTTCTaGATATGGACCTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSADLSCF*IWTCSL
Trigger: AAGACTACAGGTCCATATCCAGAAACACGACAAGTC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTCTTATGGTTCCAACTaGTTCAGTTTGCACAGATAT +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHSYGSN*FSLHRY
Trigger: ATATCTGTGCAAACTGAACCAGTTGGAACCATAAGA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCTTTGGGTGGAGATGTaGCACTCAGATATTGAGGAC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLWVEM*HSDIED
Trigger: GTCCTCAATATCTGAGTGCCACATCTCCACCCAAAG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTTTCTTGTCTTTGGGTaGAGATGTGGCACTCAGATA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAFLVFG*RCGTQI
Trigger: TATCTGAGTGCCACATCTCCACCCAAAGACAAGAAA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGAGCCAGCTGTACTGTaGAATCTGCCCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENEPAVL*NLPGGE
Trigger: CTCACCTCCGGGCAGATTCCACAGTACAGCTGGCTC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTATGCAGTACTTTCTGTaGACTTATATCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPMQYFL*TYIIRE
Trigger: CTCCCTGATGATATAAGTCCACAGAAAGTACTGCAT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGGATTGAGTTCCTGTaGAAATCTCCTCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASWIEFL*KSPQEV
Trigger: CACCTCCTGAGGAGATTTCCACAGGAACTCAATCCA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTGGGGAGCAGTTCTTaGTCGCTCAATGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLGSSS*SLNAML
Trigger: CAGCATGGCATTGAGCGACCAAGAACTGCTCCCCAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTTCTGTTTGGGTTTGTaGTGGTATAAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPFCLGL*WYKLAE
Trigger: TTCAGCCAGTTTATACCACCACAAACCCAAACAGAA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTCTGGAGGAAGGTCTaGACCTGCTGCCACTACTGT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVWRKV*TCCHYC
Trigger: ACAGTAGTGGCAGCAGGTCCAGACCTTCCTCCAGAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGTCTGCAGATATTGGTaGCAGGGGTCCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILVCRYW*QGSSCS
Trigger: GCTGCAGCTGGACCCCTGCCACCAATATCTGCAGAC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGGTGTCTGCAGATATTaGTGGCAGGGGTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENGVCRY*WQGSSC
Trigger: GCAGCTGGACCCCTGCCACCAATATCTGCAGACACC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTTCGCCTTATCCACAGCTTTTGGTGGCTCATGAAGTTCCAGATGCTGGGAATTGTAGTGAAACCTTCTaGAGTTCTGCTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: ISPYPQLLVAHEVPDAGNCSETF*SSAANC
Trigger: GCAGTTGGCAGCAGAACTCCAGAAGGTTTCACTACA...ATTCCCAGCATCTGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGGCGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGACTTGACCTCTCCCTaGAAGAAGGTACACTTTCAC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPADLTSP*KKVHFH
Trigger: GTGAAAGTGTACCTTCTTCCAGGGAGAGGTCAAGTC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGAGAGGATACCACCTTaGAGTGTTATCGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERERIPP*SVIEVR
Trigger: TCTCACCTCGATAACACTCCAAGGTGGTATCCTCTC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGCTTTTGATAACAGATaGCTTTGGGGACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAAFDNR*LWGLLA
Trigger: AGCCAGCAGTCCCCAAAGCCATCTGTTATCAAAAGC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGCTTTTGATAACAGATaGCTTTGGGGACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVAFDNR*LWGLLA
Trigger: AGCCAGCAGTCCCCAAAGCCATCTGTTATCAAAAGC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGGATTTCTCAATGGTaGGAACCTGCATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFGISQW*EPACPL
Trigger: CAAAGGACATGCAGGTTCCCACCATTGAGAAATCCC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGGGATTTCTCAATGGTaGGAACCTGCATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASGISQW*EPACPL
Trigger: CAAAGGACATGCAGGTTCCCACCATTGAGAAATCCC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCCTCACTTCCAGCCCTaGACACATACTGTAGGTATA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAPHFQP*THTVGI
Trigger: TATACCTACAGTATGTGTCCAGGGCTGGAAGTGAGG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGCAAACTTGGCACACTaGCAGGATCTTATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAANLAH*QDLMLS
Trigger: AGAGAGCATAAGATCCTGCCAGTGTGCCAAGTTTGC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTACTGAGTTCTTTGAATaGGGAGGACTCCTGCTATGC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASTEFFE*GGLLLC
Trigger: GCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAGT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTCCTTCTGGCTTGACTaGTCCATCAGACATCACCTT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFSFWLD*SIRHHL
Trigger: AAGGTGATGTCTGATGGACCAGTCAAGCCAGAAGGA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCCAGGTTGGATGGATaGTGGAAACAAAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFARLDG*WKQRRN
Trigger: GTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGATGAGCCAGGTTGGATaGATGGTGGAAACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERMSQVG*MVETKE
Trigger: CTCCTTTGTTTCCACCATCCATCCAACCTGGCTCAT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTATGAGCCAGGTTGGATaGATGGTGGAAACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASMSQVG*MVETKE
Trigger: CTCCTTTGTTTCCACCATCCATCCAACCTGGCTCAT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCTATGGAAACACGAGTaGAAAATGTCTGTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLWKHE*KMSVCR
Trigger: CCTACAAACAGACATTTTCCACTCGTGTTTCCATAG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGTCCGGGGGTCTTCCTaGTTGCTTTGGAGGATGACT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILVRGSS*LLWRMT
Trigger: AGTCATCCTCCAAAGCAATCAGGAAGACCCCCGGAC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGTCTGGGTAGGACCCTaGATTGGCTTTCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGVWVGP*IGFPVP
Trigger: AGGTACAGGAAAGCCAATTCAGGGTCCTACCCAGAC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATTTGCATGGTCTGTCTaGGGAGTCTGGGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILFAWSV*GVWVGP
Trigger: GGGTCCTACCCAGACTCCTCAGACAGACCATGCAAA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAACTGTCCCTGGTTGTTaGGCCAATGGCTTTGTTAGC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGTVPGC*ANGFVS
Trigger: GCTAACAAAGCCATTGGCTCAACAACCAGGGACAGT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGGTTTTGTAGATTGCTaGGCCGAGGGCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILGFVDC*AEGFAG
Trigger: CCCAGCAAAGCCCTCGGCTCAGCAATCTACAAAACC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGCTGAAGGAGAGCCATaGAGGGTTGGTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGAEGEP*RVGCFT
Trigger: AGTGAAACAACCAACCCTTCATGGCTCTCCTTCAGC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACAGACTGAAACGCCTTaGCTGCTCCTGAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILQTETP*LLLRLW
Trigger: CCAAAGCCTCAGGAGCAGTCAAGGCGTTTCAGTCTG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGTGCTGGTGGTGCTTaGCCTGTGGATTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGAGGA*PVDLGG
Trigger: GCCACCCAAATCCACAGGTCAAGCACCACCAGCACC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCCATTTCTGCAGCCTaGCGTAACTCTTCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSISAA*RNSSVG
Trigger: TCCGACAGAAGAGTTACGTCAGGCTGCAGAAATGGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTAAGGAAATAACAATATaGTCAGCACTAGCTCTACCA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPKEITI*SALALP
Trigger: TGGTAGAGCTAGTGCTGATCATATTGTTATTTCCTT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTTTGGTCATCACACTTaGAGTAGACTCATCCATTGT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAFGHHT*SRLIHC
Trigger: ACAATGGATGAGTCTACTTCAAGTGTGATGACCAAA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGTAGTAACTCTCCCTaGAGTCAGATCTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVCSNSP*SQIYCC
Trigger: ACAGCAGTAGATCTGACTTCAGGGAGAGTTACTACA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCAGTTGCCCAAAATTaGCTGCCTTCCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSVAQN*LPSRAA
Trigger: TGCTGCTCTGGAAGGCAGTCAATTTTGGGCAACTGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGTGGCACTCAGATATTaGGGACTTTGTGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAVALRY*GLCVSE
Trigger: TTCAGACACACAAAGTCCTCAATATCTGAGTGCCAC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGTGGCACTCAGATATTaGGGACTTTGTGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERVALRY*GLCVSE
Trigger: TTCAGACACACAAAGTCCTCAATATCTGAGTGCCAC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACGCTCAATGCCATGCTaGCTTTCTATTCGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGRSMPC*LSIRVG
Trigger: ACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGACTGTTGAGTGTATaGGGTGGGTGCTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVRLLSV*GGCLGR
Trigger: CCTACCCAAGCACCCACCTCATACACTCAACAGTCT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGACAGATCCTTTTCATaGAGGCTAAATGCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASDRSFS*RLNAVL
Trigger: AAGCACCGCATTTAGCCTTCATGAAAAGGATCTGTC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAAATCTGTCACTTCTTaGGACCGGCGTGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGKSVTS*DRRVSV
Trigger: CACTGAGACACGCCGGTCTCAAGAAGTGACAGATTT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTAGAAGTCATATAGCTTaGATAATCAGGTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPRSHIA*IIRFKV
Trigger: GACCTTGAACCTGATTATTCAAGCTATATGACTTCT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAAAGTGATGTCATCTTaGAGGAGCCTTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGKVMSS*RSLALE
Trigger: CTCCAGGGCAAGGCTCCTTCAAGATGACATCACTTT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCCCTCATGTGTTGCTaGACTTCAGGCAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSLMCC*TSGNEW
Trigger: CCACTCATTGCCTGAAGTTCAGCAACACATGAGGGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGGATTTCGCCTTATCCACAGCTTTTGGTGGCTCATGAAGTTCCAGATGCTGGGAATCTGATAGCATATTaGGGTCCAGTCTTACACATA +
Preference number: 4 (lower is better)
Translates to: GISPYPQLLVAHEVPDAGNLIAY*GPVLHI
Trigger: TATGTGTAAGACTGGACCTCAATATGCTATCAGATT...CCCAGCATCTGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGGCGAAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR TCA 90 bp GTCCAGTCTTACACATATTTCTGCTTCCCCACTTTGCTGACTAATGATACTCTGGCTTTTGGTGGCTCATaGAGTTCCAGATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VQSYTYFCFPTLLTNDTLAFGGS*SSRCWE
Trigger: TTCCCAGCATCTGGAACTTCATGAGCCACCAAAAGC...CAGAGTATCATTAGTCAGCAAAGTGGGGAAGCAGAAATATGTGTAAGACTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTTCAGTCTGTTCTTTaGGAGGATACCACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERFQSVL*EDTTLE
Trigger: CTCCAAGGTGGTATCCTCTCAAAGAACAGACTGAAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTCAGTCTGTTCTTTaGGAGGATACCACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVFQSVL*EDTTLE
Trigger: CTCCAAGGTGGTATCCTCTCAAAGAACAGACTGAAA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGAGAAAAGTAAAATCTaGAGAGAATGTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAEKSKI*RECPAG
Trigger: TCCTGCAGGACATTCTCTTCAGATTTTACTTTTCTC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTTTGGTACATAGACTaGAGATGTCTTGGCTTAATG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALWYID*RCLGLM
Trigger: CATTAAGCCAAGACATCTTCAGTCTATGTACCAAAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTCAACTCTGCTGATTaGCCTAGCCCCATCGCTAGT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVNSAD*PSPIAS
Trigger: ACTAGCGATGGGGCTAGGTCAATCAGCAGAGTTGAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGTGAGCAGAGGATGTTaGAAACTGAAAGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASVSRGC*KLKANR
Trigger: CCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCAC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTGAGCAGAGGATGTTaGAAACTGAAAGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFVSRGC*KLKANR
Trigger: CCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAATTGTGCTCCTCAGTaGGGTTGCATTGCCTTATCA +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASNCAPQ*GCIALS
Trigger: TGATAAGGCAATGCAACCTCACTGAGGAGCACAATT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGTGATGATGAAGTCCTaGAATGCCATGCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERVMMKS*NAMPTK
Trigger: TTTTGTGGGCATGGCATTTCAGGACTTCATCATCAC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGCGCCAGGCAACCTTTaGAGAAGACACCTCCCGGAC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLAPGNL*RRHLPD
Trigger: GTCCGGGAGGTGTCTTCTGCAAAGGTTGCCTGGCGC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTACCAGGTCCTTGCTaGTTAGGAATCGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLPGPC*LGIGLG
Trigger: ACCCAAGCCGATTCCTAAGCAGCAAGGACCTGGTAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTATATTGATTTGGGAGTaGCATCCTGCTGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVILIWE*HPAEAD
Trigger: ATCCGCTTCAGCAGGATGGCACTCCCAAATCAATAT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCTTTTTAGGCTCAGGTaGCTTGGAGAGATCCTGTTT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLFRLR*LGEILF
Trigger: AAACAGGATCTCTCCAAGGCACCTGAGCCTAAAAAG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTATACTTTTTGCAGGTaGTGGTGGTGCTTGACCTGT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAYTFCR*WWCLTC
Trigger: ACAGGTCAAGCACCACCAGCACCTGCAAAAAGTATA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGTGCAGGTGGCATTTTaGGTATGTCTCCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGVQVAF*VCLQAV
Trigger: GACAGCTTGGAGACATACGCAAAATGCCACCTGCAC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTGCATCTTCATCAATaGTTGTGCTACTTTTTCGAG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALHLHQ*LCYFFE
Trigger: CTCGAAAAAGTAGCACAAGCATTGATGAAGATGCAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGCAGAATATTTATCTaGTATTGTACTGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHCRIFI*YCTVEL
Trigger: GAGCTCAACAGTACAATAGCAGATAAATATTCTGCA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGTCTGTGCCGAGCTTTaGGTTGCTGTTTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGVCAEL*VAVCSL
Trigger: GAGAGAGCAAACAGCAACGCAAAGCTCGGCACAGAC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGGGCCAACTGGTAATTaGTTGACTAGCAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERGPTGN*LTSRRI
Trigger: GATTCTTCTGCTAGTCAAGCAATTACCAGTTGGCCC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCAGGCTGCTGTGCTGTaGAGCTCCTTCCAAATGGTA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVQAAVL*SSFQMV
Trigger: TACCATTTGGAAGGAGCTGCACAGCACAGCAGCCTG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTCAGGAAGAGTAGTTaGAGGCTGCTGTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLRKSS*RLLCCA
Trigger: TGCACAGCACAGCAGCCTGCAACTACTCTTCCTGAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTCAGGAAGAGTAGTTaGAGGCTGCTGTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLRKSS*RLLCCA
Trigger: TGCACAGCACAGCAGCCTGCAACTACTCTTCCTGAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTGACCTTCCAAAATTaGCTGCTCTGTAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLTFQN*LLCSGL
Trigger: CAAACCACTACAGAGCAGGCAATTTTGGAAGGTCAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGGTTGCATCTTCAGTTaGCCAAAATTGACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERGCIFS*PKLTAF
Trigger: GAAGGCAGTCAATTTTGGGCAACTGAAGATGCAACC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGCTACCGTTTGAACTaGTATGCTGGAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASCYRLN*YAGDFG
Trigger: TCCAAAGTCTCCAGCATAGCAGTTCAAACGGTAGCA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTGTGAAGGACATTGTTaGCACAGCTTGGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPACEGHC*HSLECW
Trigger: CCAACATTCCAAGCTGTGGCAACAATGTCCTTCACA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTGGACTGCTTGCCATaGTACTTCTTTCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALDCLP*YFFPPN
Trigger: GTTTGGAGGAAAGAAGTAGCATGGCAAGCAGTCCAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTGCTTGATATTGGACTaGTTGCCATGCTACTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSACLILD*LPCYFF
Trigger: AAAGAAGTAGCATGGCAAGCAGTCCAATATCAAGCA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTGCTGGCAGTTGTTTTaGTGCTTGTTTTTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSACWQLF*CLFFKC
Trigger: ACACTTGAAAAACAAGCAGCAAAACAACTGCCAGCA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGATCTTGAAGGAGCCTTaGCCTGGAGGAAATGCCACC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVILKEP*PGGNAT
Trigger: GGTGGCATTTCCTCCAGGGCAAGGCTCCTTCAAGAT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAGAACCAGCGGTGACTaGTGTAGTGAAACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGRTSGD*CSETFW
Trigger: CCAGAAGGTTTCACTACAGCAGTCACCGCTGGTTCT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGGTTTTGCTTTGACTaGGAGATGGTCCATGAGAAC +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVWFCFD*EMVHEN
Trigger: GTTCTCATGGACCATCTCGCAGTCAAAGCAAAACCA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCACGCTATACCCACTaGCAAAGCTGCTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPRYTH*QSCCPR
Trigger: CCTCGGGCAGCAGCTTTGGCAGTGGGTATAGCGTGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAATGGGGAGGACTCCTaGTATGCTGTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGNGEDS*YAVSVL
Trigger: CAGCACAGACACAGCATAGCAGGAGTCCTCCCCATT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGGCTTTGGTCTTGGTTaGCATTGGCTGGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENGFGLG*HWLVEA
Trigger: TGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTTTACTTGGTTGAATaGGGAGTTGTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFFYLVE*GVVARQ
Trigger: CTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp TTCCATTCCAATACTTGCATCCCTGGTAATCCCCCTGGAACAAGAACAAGGAAGTCCAACCTTGATCACTaGCATGCCATCTTCCATAAG +
Preference number: 4 (lower is better)
Translates to: FHSNTCIPGNPPGTRTRKSNLDH*HAIFHK
Trigger: CTTATGGAAGATGGCATGGCAGTGATCAAGGTTGGA...CTTCCTTGTTCTTGTTCCAGGGGGATTACCAGGGATGCAAGTATTGGAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456006.2
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGGTTGCTGAATAGGTaGTTTGGATGGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGWLLNR*FGWAWQ
Trigger: CTGCCAAGCCCATCCAAACCACCTATTCAGCAACCA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAACCAAGAGGCTGAGCTaGAGGCTTTGTTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILTKRLS*RLCCPW
Trigger: CCAGGGACAACAAAGCCTCCAGCTCAGCCTCTTGGT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCCCTGGCTGTTGAGCTaGAGTCTTTCCAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENPWLLS*SLSNSR
Trigger: CCTGGAGTTGGAAAGACTCCAGCTCAACAGCCAGGG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGTTGGAGGCTTTGCTaGCCCTGGCTGTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGWRLC*PWLLSW
Trigger: CCAGCTCAACAGCCAGGGCCAGCAAAGCCTCCAACC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCCCAGGCTGCTGAACTaGAGTCTTTGTAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYPRLLN*SLCRPR
Trigger: CCTGGGCCTACAAAGACTCCAGTTCAGCAGCCTGGG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATCCTGCCTGTTGAGCTaGAATCTTTCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILSCLLS*NLSWPR
Trigger: CCTGGGCCAGGAAAGATTCCAGCTCAACAGGCAGGA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTGCAGCATCCTTCTTTaGGGAAGTCTGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVCSILL*GSLLWL
Trigger: CAGCCACAGCAGACTTCCCCAAAGAAGGATGCTGCA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCATCTTGGGCTGCTTTaGTTTATCATCAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAHLGLL*FIISNR
Trigger: CCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGGACTGTTGAGGTGTaGGGACAGTTTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGTVEV*GQFGQR
Trigger: CCGCTGGCCAAACTGTCCCCACACCTCAACAGTCCC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAATCTCAGTCAAATGTaGTGTAGGGTTAAATCCACA +
Preference number: 4 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTNLSQM*CRVKST
Trigger: TGTGGATTTAACCCTACACCACATTTGACTGAGATT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTTCACTAATTTTACTTaGGGAGGCACTGCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAFTNFT*GGTAVF
Trigger: GAAAACAGCAGTGCCTCCCCAAGTAAAATTAGTGAA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCTAATCTCTTTGAGCTaGTTTCTGATGAACTCATCA +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLISLS*FLMNSS
Trigger: TGATGAGTTCATCAGAAACCAGCTCAAAGAGATTAG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGTGAAGAGCTATCTGTaGTACAGACCGAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAVKSYL*YRPKKQ
Trigger: CTGTTTCTTCGGTCTGTACCACAGATAGCTCTTCAC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAAAGACCTGGTCACTTaGTATCCTGTATGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGKDLVT*YPVWGL
Trigger: GAGCCCCCATACAGGATACCAAGTGACCAGGTCTTT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGTTGTTGCAGCTGTTaGATCTGCTCAAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVCCCSC*ICSSCN
Trigger: GTTACAGCTTGAGCAGATCCAACAGCTGCAACAACA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGTCTTAGGACTTGCTaGGGGAACTTTAGCCATATC +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVCLRTC*GNFSHI
Trigger: GATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGACTTTCGTCTGCTGTTaGACTCAGAGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVTFVCC*TQRLGV
Trigger: GACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTGTTTGGGTTTGTGGTaGTATAAACTGGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSACLGLW*YKLAEF
Trigger: GAATTCAGCCAGTTTATACCACCACAAACCCAAACA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGTCTGGAGGAAGGTCTaGACCTGCTGCCACTACTGT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILVWRKV*TCCHYC
Trigger: ACAGTAGTGGCAGCAGGTCCAGACCTTCCTCCAGAC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAGACAGAGGAAGGTCTaGAGGAAGGTCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENRQRKV*RKVWTC
Trigger: GCAGGTCCAGACCTTCCTCCAGACCTTCCTCTGTCT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGATCCACAGCTTTTGGTaGCTCATGAAGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERIHSFW*LMKFQM
Trigger: CATCTGGAACTTCATGAGCCACCAAAAGCTGTGGAT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGCTGGCTGCTCTGACTaGAATGAGACTTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGAGCSD*NETCHD
Trigger: ATCATGGCAAGTCTCATTCCAGTCAGAGCAGCCAGC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTGCAGGCCGGTGATTaGGAGGCTTTGTTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLQAGD*EALLVE
Trigger: TTCAACCAACAAAGCCTCCCAATCACCGGCCTGCAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCCTACTCCTACCCCTaGCTGTTTTACAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSYSYP*LFYRLL
Trigger: CAAGAGCCTGTAAAACAGCCAGGGGTAGGAGTAGGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGCAGTGTGGGTGAAATaGAAACCCAGAGTATGTATC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASAVWVK*KPRVCI
Trigger: GATACATACTCTGGGTTTCCATTTCACCCACACTGC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGGATGCCTCAGAGTCTaGTATCAAATCAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASGCLRV*YQIKRV
Trigger: AACCCTTTTGATTTGATATCAGACTCTGAGGCATCC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTAAAGGAGGTTTTATaGTTCCTTCAGGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVKEVL*FLQVFL
Trigger: AAGGAAAACCTGAAGGAATCATAAAACCTCCTTTAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTGTTGAGAAGATATTaGTTTGGGAGTGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLLRRY*FGSAIL
Trigger: CAGGATGGCACTCCCAAATCAATATCTTCTCAACAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACTGGATGCATCTCGTTaGAGTGGCAATTTTGCATGG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLDASR*SGNFAW
Trigger: CCATGCAAAATTGCCACTTCAACGAGATGCATCCAG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTGGTGGAAAACTCTGTaGGGGTTTGGCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVWWKTL*GFGRVC
Trigger: ACAGACTCTGCCAAACCCTCACAGAGTTTTCCACCA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATGGTGGAAAACTCTGTaGGGGTTTGGCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGWWKTL*GFGRVC
Trigger: ACAGACTCTGCCAAACCCTCACAGAGTTTTCCACCA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGCCTGGCTGAAGATTaGTGCTCCAAACCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVCLAED*CSKPKE
Trigger: CTCTTTGGGTTTGGAGCATCAATCTTCAGCCAGGCA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTCTCCAAGCTGTCCTaGTATTGCTCTCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVSKLS*YCSLGL
Trigger: CAAACCCAGAGAGCAATATCAGGACAGCTTGGAGAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAGGGCTGCTTTCTTGTaGAAAAGAGTCCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASRAAFL*KRVLFE
Trigger: CTCAAAAAGGACTCTTTTTCACAAGAAAGCAGCCCT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGCAAGTGTACTTGCTTaGGCTTCCAAAATAGATAGG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAASVLA*ASKIDR
Trigger: CCTATCTATTTTGGAAGCTCAAGCAAGTACACTTGC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACAGGGTAGTAATGGGTaGAGAGCTATCTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGQGSNG*RAICGT
Trigger: TGTACCACAGATAGCTCTTCACCCATTACTACCCTG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGTAGTTGTTGGAAGCTaGGGAATCACTGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVVVVGS*GITGLG
Trigger: CCCCAAACCAGTGATTCCTCAGCTTCCAACAACTAC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTTGGAAAATCTTGGTaGAGACTTGTTGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERFGKSW*RLVGVW
Trigger: CCACACTCCAACAAGTCTTCACCAAGATTTTCCAAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCATCTTCTTTATACTaGGGCTTCTCTAAATGTATG +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPSSLY*GFSKCM
Trigger: CATACATTTAGAGAAGCCTCAGTATAAAGAAGATGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGGGCTCAGCATGCTTTaGTGTTGTAAGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVGLSML*CCKLEW
Trigger: CCACTCCAACTTACAACATCAAAGCATGCTGAGCCC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACAGTCCATCCATTTGTaGCACCAACAGGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILQSIHL*HQQEAQ
Trigger: CTGTGCCTCCTGTTGGTGTCACAAATGGATGGACTG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTACTTCCCCATCAGTaGTTCCCTGGGATACGGTGC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLLPHQ*FPGIRC
Trigger: GCACCGTATCCCAGGGAATCACTGATGGGGAAGTAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTGTTGTTATAAAATATaGTCTAGGCATTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSACCYKI*SRHWLA
Trigger: AGCCAGCCAATGCCTAGATCATATTTTATAACAACA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCCAGAGCAGCATACTaGCCTTCCAAAATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSRAAY*PSKIAC
Trigger: GCAGGCAATTTTGGAAGGTCAGTATGCTGCTCTGGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTAACACCATCAGACTaGACGGTGTACCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVTPSD*TVYHPW
Trigger: CCAAGGATGGTACACCGTTCAGTCTGATGGTGTTAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGTAACACCATCAGACTaGACGGTGTACCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGVTPSD*TVYHPW
Trigger: CCAAGGATGGTACACCGTTCAGTCTGATGGTGTTAC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGAATCTGCTTCTGTTTaGCATCCTAAACTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGESASV*HPKLPP
Trigger: AGGGGGCAGTTTAGGATGTCAAACAGAAGCAGATTC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTGTGCCCATTGTGCTaGATGTGGATTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLCPLC*MWIEFL
Trigger: CAGGAACTCAATCCACATTCAGCACAATGGGCACAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGTTGAACTTGAGGTGTaGAGGACATTGTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGVELEV*RTLLPQ
Trigger: CTGTGGCAACAATGTCCTTCACACCTCAAGTTCAAC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGAGACGGTCTGTTTTTaGCAGATCCTTTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVETVCF*QILFMK
Trigger: CTTCATGAAAAGGATCTGTCAAAAACAGACCGTCTC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGAAAGACCAGCAAGGTaGTCTAAGCTCTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVERPAR*SKLSVP
Trigger: AGGGACAGAGAGCTTAGATCACCTTGCTGGTCTTTC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAATGCCACCAATAGATaGAGTGCTAGAAGTCATATA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSANATNR*SARSHI
Trigger: TATATGACTTCTAGCACTTCATCTATTGGTGGCATT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAGAGCTTCAGCCTCTTaGGCTTTCAGTCTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGRASAS*AFSLRE
Trigger: TTCCCTAAGACTGAAAGCTCAAGAGGCTGAAGCTCT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACATTCTGGACAACCATaGCTTGACCTCTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGHSGQP*LDLSLE
Trigger: TTCCAGGGAGAGGTCAAGTCATGGTTGTCCAGAATG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCCAGTGTTTTCTTCTTaGGCTGTTCCATGGAAATAC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASPVFSS*AVPWKY
Trigger: GTATTTCCATGGAACAGCTCAAGAAGAAAACACTGG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGGAGTGTTATCGAGGTaGGATGTGCTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERGVLSR*DVLDKS
Trigger: TGATTTATCTAGCACATCTCACCTCGATAACACTCC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAACCTGCATGTCCTTTaGTGGGTCAGGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVNLHVL*WVREDT
Trigger: GGTATCTTCCCTGACCCATCAAAGGACATGCAGGTT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTCTTCCAGGTGGGTCTaGGTGACGCTGGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENSSRWV*VTLVLL
Trigger: AAGCAAAACCAGCGTCACTCAGACCCACCTGGAAGA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTACTATAGTCTTGATGTaGGGCTATTTAGAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSATIVLM*GYLEQF
Trigger: AAACTGCTCTAAATAGCCTCACATCAAGACTATAGT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGTAGTGGGAGCACCTaGGCACGTCACCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSSGST*ARHQTN
Trigger: ATTTGTTTGGTGACGTGCTCAGGTGCTCCCACTACT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCACCTCCTTCTGGCTTaGCTGGTCCATCAGACATCA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENHLLLA*LVHQTS
Trigger: TGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAACTCTTGTTTCCTGTaGATGGAAGGCGACTCCGCA +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGNSCFL*MEGDSA
Trigger: TGCGGAGTCGCCTTCCATGCACAGGAAACAAGAGTT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCTACCAGGTCCTTGCTaGTTAGGAATCGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLPGPC*LGIGLG
Trigger: ACCCAAGCCGATTCCTAAGCAGCAAGGACCTGGTAG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTTTCATGTCCAGGCTaGTGTGCTGGAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGFSCPG*CAGGFP
Trigger: TGGAAAACCTCCAGCACAGCAGCCTGGACATGAAAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGACACTGTTGGTGGCTaGAGAGGTTTTCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVDTVGG*RGFPDP
Trigger: AGGATCTGGAAAACCTCTGCAGCCACCAACAGTGTC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATACAGGGGCCTTGTCCTaGTCAGATGGGACAGAAGGT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYTGALS*SDGTEG
Trigger: ACCTTCTGTCCCATCTGAGCAGGACAAGGCCCCTGT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGATCAGGTTTTGCTGTaGATGGTGGCTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVDQVLL*MVAVAV
Trigger: AACAGCCACAGCCACCATGCACAGCAAAACCTGATC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCACCTGATCAGGTTTTaGTGTGCATGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENHLIRF*CAWWLW
Trigger: CCACAGCCACCATGCACAGCAAAACCTGATCAGGTG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGTGAAGCTGGAAGCATaGAGACTCGAAGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVVKLEA*RLEDPS
Trigger: AGAGGGATCTTCGAGTCTGCATGCTTCCAGCTTCAC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCCATTTTCTTCTTCTTaGCTTGTTAGCAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERPFSSS*LVSRLP
Trigger: TGGCAGTCTGCTAACAAGGCAAGAAGAAGAAAATGG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCAGCAAAGCGCTGTTaGTTAATTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASSAKRC*LIFSSS
Trigger: GGAACTGGAGAAAATTAAGCAACAGCGCTTTGCTGA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGGCTGTCTTAGGACTTaGTGGGGGAACTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVGCLRT*WGNFSH
Trigger: ATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGATAAAGTATGGCTaGTGGCAGTTGTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLIKYG*WQLFCC
Trigger: GCAGCAAAACAACTGCCAGCAGCCATACTTTATCAA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGGTATTTCCTAATGTaGCCAGTCCTGTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGWYFLM*PVLCQE
Trigger: CTCTTGGCACAGGACTGGGCACATTAGGAAATACCA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTGATCCCTGGTGTCTaGAGATATTGGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLIPGV*RYWWQG
Trigger: CCCCTGCCACCAATATCTGCAGACACCAGGGATCAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTGTTATTTTTATCCTTaGGTGAGGAAAGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPCYFYP*VRKDVV
Trigger: CACTACATCTTTCCTCACGCAAGGATAAAAATAACA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GGTCAGAATAACCATTGTTGTCTCGAGGAACAAGATTTCTTGCTTGGAGAATATAGTTCTGCTGCCAACTaGTTAGGATCAACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GQNNHCCLEEQDFLLGEYSSAAN*LGSTPG
Trigger: CCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACT...ATATTCTCCAAGCAAGAAATCTTGTTCCTCGAGACAACAATGGTTATTCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR GCA 90 bp AGATGCTGGGAATTTTCAGAATCTGATAGCATATTGAGGTCCAGTCTTACACATAGTTCTGCTGCCAACTaGTTAGGATCAACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RCWEFSESDSILRSSLTHSSAAN*LGSTPG
Trigger: CCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACT...ATGTGTAAGACTGGACCTCAATATGCTATCAGATTCTGAAAATTCCCAGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAGTGTAAGTGACATGTaGAAAGTGACACAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPASVSDM*KVTQSV
Trigger: CACTGACTGTGTCACTTTGCACATGTCACTTACACT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAGAAGTTTGGTCAGCTaGAAACTTGGCACACTGGCA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGRSLVS*KLGTLA
Trigger: TGCCAGTGTGCCAAGTTTGCAGCTGACCAAACTTCT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGGTAGGACCCTGAATTaGCTTTCCTGTACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENGRTLN*LSCTWR
Trigger: CCTCCAGGTACAGGAAAGCCAATTCAGGGTCCTACC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGTTGTCCCTGGTGGCTaGACTGGGGGTTTCACTGTC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLVVPGG*TGGFTV
Trigger: GACAGTGAAACCCCCAGTCCAGCCACCAGGGACAAC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCCAGGCTGCTGAACTaGAGTCTTTGTAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPRLLN*SLCRPR
Trigger: CCTGGGCCTACAAAGACTCCAGTTCAGCAGCCTGGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGGAGACACTGTTGGTaGCTGCAGAGGTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVWRHCW*LQRFSR
Trigger: TCTGGAAAACCTCTGCAGCCACCAACAGTGTCTCCA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGGGCTGCTTGGCCTTaGCTGAAGGAGAGCCATGAA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGAAWP*LKESHE
Trigger: TTCATGGCTCTCCTTCAGCCAAGGCCAAGCAGCCCC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTTGTCCTGCTCAGATaGGACAGAAGGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLVLLR*DRRFFG
Trigger: CCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGCTTTAGAATCAAATaGGCTGACTTTTTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGFRIK*ADFFPC
Trigger: ACAGGGGAAAAAGTCAGCCCATTTGATTCTAAAGCC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCATTGGCTTGGCATCTaGTTTAGGACTCATTTTGGT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAHWLGI*FRTHFG
Trigger: ACCAAAATGAGTCCTAAACCAGATGCCAAGCCAATG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCAGGTTGGCCTGCAGTaGAAATTAAATTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASQVGLQ*KLNLMP
Trigger: AGGCATCAAATTTAATTTCCACTGCAGGCCAACCTG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTTTTTGCAGGTGCTaGTGGTGCTTGACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTFCRC*WCLTCG
Trigger: TCCACAGGTCAAGCACCACCAGCACCTGCAAAAAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCTTTATGGTCCTTGCTaGAAGGAATATCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERLYGPC*KEYLVG
Trigger: GCCAACAAGATATTCCTTCCAGCAAGGACCATAAAG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGAACAAGAAGATCTATaGAGCTCCTCCATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVEQEDL*SSSISA
Trigger: TGCAGAAATGGAGGAGCTCCATAGATCTTCTTGTTC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTTTTTAACGCCTTTTaGCTACCTTCTTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALFNAF*LPSFCI
Trigger: TATGCAGAAAGAAGGTAGCCAAAAGGCGTTAAAAAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTGTCAAAGAGGCATCTaGCATTCTGTCAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERCQRGI*HSVKVH
Trigger: ATGGACTTTGACAGAATGCCAGATGCCTCTTTGACA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAGACTTGTTGGAGTGTaGGGAAAGTGGGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENRLVGV*GKWGGR
Trigger: CCTACCTCCCCACTTTCCCCACACTCCAACAAGTCT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTGGTGAAGACTTGTTaGAGTGTGGGGAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLVKTC*SVGKVG
Trigger: CCCCACTTTCCCCACACTCCAACAAGTCTTCACCAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTATCTGTTGGAGTCCCTaGTTCAGATGGCAATGTAAT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVICWSP*FRWQCN
Trigger: ATTACATTGCCATCTGAACCAGGGACTCCAACAGAT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAGCAGAAGAATCTGTTaGAGTCCCTGGTTCAGATGG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSRRIC*SPWFRW
Trigger: CCATCTGAACCAGGGACTCCAACAGATTCTTCTGCT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGCTATAGGAAAGACCTaGTCACTTGGTATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAAIGKT*SLGILY
Trigger: ATACAGGATACCAAGTGACCAGGTCTTTCCTATAGC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCTATAGGAAAGACCTaGTCACTTGGTATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFAIGKT*SLGILY
Trigger: ATACAGGATACCAAGTGACCAGGTCTTTCCTATAGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGCTGGCTATGGTGCATaGCAGGTAATGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVAGYGA*QVMKSL
Trigger: CAGTGACTTCATTACCTGCCATGCACCATAGCCAGC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGCATTGGCTGGCTATaGTGCATGGCAGGTAATGAA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGIGWL*CMAGNE
Trigger: TTCATTACCTGCCATGCACCATAGCCAGCCAATGCC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGCTCAGGATACCAGGTaGGGCAATGTACTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGAQDTR*GNVLSN
Trigger: GTTACTCAGTACATTGCCCCACCTGGTATCCTGAGC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACTTTGGAAAGGGGTTTaGTCTTGTCAGCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLWKGV*SCQPLS
Trigger: TGACAGAGGCTGACAAGACCAAACCCCTTTCCAAAG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTGGAGGGTGTTCTTATaGTTCCAACTGGTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAWRVFL*FQLVQF
Trigger: AAACTGAACCAGTTGGAACCATAAGAACACCCTCCA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGGCGTTTCTTGTCTTTaGGTGGAGATGTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVGVSCL*VEMWHS
Trigger: TGAGTGCCACATCTCCACCCAAAGACAAGAAACGCC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAACTTTCGTCTGCTGTTaGACTCAGAGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILTFVCC*TQRLGV
Trigger: GACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAACCGGCGTGTCTCAGTaGTTCGAAGGAGACGGTCTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLTGVSQ*FEGDGL
Trigger: CAGACCGTCTCCTTCGAACCACTGAGACACGCCGGT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGTAAGGATCCTCCATTaGGTCTTCCTCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILVRILH*VFLRLH
Trigger: GTGAAGGCGGAGGAAGACCCAATGGAGGATCCTTAC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTATAAAGTATGGCTGCTaGCAGTTGTTTTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFIKYGC*QLFCCL
Trigger: CAAGCAGCAAAACAACTGCCAGCAGCCATACTTTAT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGGATTAAGACTTTTCTaGACATGTTTAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAGLRLF*TCLVLL
Trigger: GAGAAGGACTAAACATGTCCAGAAAAGTCTTAATCC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGCTTTGACTGCGAGATaGTCCATGAGAACGGAGATG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVALTAR*SMRTEM
Trigger: CATCTCCGTTCTCATGGACCATCTCGCAGTCAAAGC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCCATCGCTAGTTCCTTaGAACGGAGGGGCTTCTATA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVPSLVP*NGGASI
Trigger: TATAGAAGCCCCTCCGTTCCAAGGAACTAGCGATGG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGTTGCCATTGGCTGGTaGAGGCAGATTATCAGACTG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGVAIGW*RQIIRL
Trigger: CAGTCTGATAATCTGCCTCCACCAGCCAATGGCAAC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTATTACACAGGCACTTaGAGATTCACATGCCCAACA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERYYTGT*RFTCPT
Trigger: TGTTGGGCATGTGAATCTCCAAGTGCCTGTGTAATA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CAA 72 bp GTGTTGCATAGAATAATTCCAGTACAACCTAGAAGTTaGGTCAGCTGCAAACTTGGCACACTGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: VLHRIIPVQPRS*VSCKLGTLAGS
Trigger: AGATCCTGCCAGTGTGCCAAGTTTGCAGCTGACCAAACTTCTAGGTTGTACTGGAATTATTCTATGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTGGATGCATCTCGTTaGAGTGGCAATTTTGCATGG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLDASR*SGNFAW
Trigger: CCATGCAAAATTGCCACTTCAACGAGATGCATCCAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGCAGGCCCAGGCTGTaGTTTTTCATGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCRPRL*FFMSRL
Trigger: CAGCCTGGACATGAAAAATCACAGCCTGGGCCTGCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACAGACTGAAACGCCTTaGCTGCTCCTGAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLQTETP*LLLRLW
Trigger: CCAAAGCCTCAGGAGCAGTCAAGGCGTTTCAGTCTG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGGAGTTGTAGGCTGTaGTTTGGGGGCATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVRSCRL*FGGISN
Trigger: ATTACTGATGCCCCCAAATCACAGCCTACAACTCCT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGAAGGACAGCCTTTTaGGGCTCAGCTGTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGRTAF*GSAVKD
Trigger: ATCTTTAACAGCTGAGCCTCAAAAGGCTGTCCTTCC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGGAAGGACAGCCTTTTaGGGCTCAGCTGTTAAAGAT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGGRTAF*GSAVKD
Trigger: ATCTTTAACAGCTGAGCCTCAAAAGGCTGTCCTTCC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCAGAGATTACACACTTaGTTCTTGCATTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAQRLHT*FLHSVQ
Trigger: TTGCACTGAATGCAAGAATCAAGTGTGTAATCTCTG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCAGAGATTACACACTTaGTTCTTGCATTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVQRLHT*FLHSVQ
Trigger: TTGCACTGAATGCAAGAATCAAGTGTGTAATCTCTG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTCTCTTCTTGTTTTTaGTCTGTGGTTACCATAGGA +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLSSCF*SVVTIG
Trigger: TCCTATGGTAACCACAGATCAAAAACAAGAAGAGAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGGGCTTTTAGGCTGCTaGGAACTTGAGGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILGLLGC*ELEVSD
Trigger: ATCAGACACCTCAAGTTCTCAGCAGCCTAAAAGCCC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTCTTTGTGGAACAGGTaGGTTTTCACTTTCACTACT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVSLWNR*VFTFTT
Trigger: AGTAGTGAAAGTGAAAACTCACCTGTTCCACAAAGA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCATCATGCCATGAGTaGCGTCTTCCTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSSCHE*RLPASS
Trigger: TGAAGATGCAGGAAGACGTCACTCATGGCATGATGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACTTTCCCTTCTTCTCTaGGCTCGAAGTTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLSLLL*ARSSSL
Trigger: CAAAGATGAACTTCGAGCTCAGAGAAGAAGGGAAAG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGAAACAATATCTTCCTaGGGCACAACAGAATGTAAG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAETISS*GTTECK
Trigger: CTTACATTCTGTTGTGCCTCAGGAAGATATTGTTTC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGAAACAATATCTTCCTaGGGCACAACAGAATGTAAG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVETISS*GTTECK
Trigger: CTTACATTCTGTTGTGCCTCAGGAAGATATTGTTTC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGACAGAAGAAGGTGGGTaGTCAAACACGGTTTCGGAT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVTEEGG*SNTVSD
Trigger: ATCCGAAACCGTGTTTGATCACCCACCTTCTTCTGT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGGGCTCAGCATGCTTTaGTGTTGTAAGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILGLSML*CCKLEW
Trigger: CCACTCCAACTTACAACATCAAAGCATGCTGAGCCC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGAGACTTGGTTGTACTaGGATCCACTACTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVETWLY*DPLLPH
Trigger: ATGGGGAAGTAGTGGATCTCAGTACAACCAAGTCTC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGTAGTAACTCTCCCTaGAGTCAGATCTACTGCTGT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGCSNSP*SQIYCC
Trigger: ACAGCAGTAGATCTGACTTCAGGGAGAGTTACTACA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGACAACACCATTAGATaGCCTCAAAACACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVDNTIR*PQNTPH
Trigger: GTGGGGAGTGTTTTGAGGTCATCTAATGGTGTTGTC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTTGCAAACTGGCACTaGTATCAATACCAGTTACTG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFANWH*YQYQLL
Trigger: CAGTAACTGGTATTGATATCAGTGCCAGTTTGCAAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGCAAACTGGCACTaGTATCAATACCAGTTACTG +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVFANWH*YQYQLL
Trigger: CAGTAACTGGTATTGATATCAGTGCCAGTTTGCAAA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCGCTCTTCTTCTTGCTaGAAGAGAAGGTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVRSSSC*KRRCCF
Trigger: GAAGCAACACCTTCTCTTTCAGCAAGAAGAAGAGCG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTCCAGAGCAGCATACTaGCCTTCCAAAATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENSRAAY*PSKIAC
Trigger: GCAGGCAATTTTGGAAGGTCAGTATGCTGCTCTGGA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATCAGTTGCCCAAAATTaGCTGCCTTCCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILSVAQN*LPSRAA
Trigger: TGCTGCTCTGGAAGGCAGTCAATTTTGGGCAACTGA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATCTCTGCTACCGTTTaGACTGCTATGCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVISATV*TAMLET
Trigger: AGTCTCCAGCATAGCAGTTCAAACGGTAGCAGAGAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGTCGGAGGAACTAGTTaGGATTCTGTTTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGVGGTS*DSVWVC
Trigger: ACAAACCCAAACAGAATCTCAACTAGTTCCTCCGAC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGAATCACTTCATAGTTTaGGGTTATCTTGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERNHFIV*GYLGLQ
Trigger: TTGGAGCCCAAGATAACCTCAAACTATGAAGTGATT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCCGCTGTTCCTTTGGTaGTCTCTCCAATGTCGTCAA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENPLFLW*SLQCRQ
Trigger: TTGACGACATTGGAGAGATCACCAAAGGAACAGCGG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTATTCTTCCTCTACTTTaGCTAATTGGCAAACTGGTC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAILPLL*LIGKLV
Trigger: GACCAGTTTGCCAATTAGTCAAAGTAGAGGAAGAAT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATGGCTTGATCCAAACTaGTCCCTGGTGTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILWLDPN*SLVSAD
Trigger: ATCTGCAGACACCAGGGATCAGTTTGGATCAAGCCA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATAGGCTTCACTGTCTaGCATGGCATGTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVIGFTV*HGMLEV
Trigger: GACTTCCAACATGCCATGTCAGACAGTGAAGCCTAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTACCTGAAACTGTGTaGTCCTTTGAGTCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERLPETV*SFESLV
Trigger: AACAAGAGACTCAAAGGATCACACAGTTTCAGGTAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGATGCTGGGAATTTTCAGAATCTGATAGCATATTGAGGTCCAGTCTTACACATGCTTTTGGTGGCTCATaGAGTTCCAGATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RCWEFSESDSILRSSLTHAFGGS*SSRCWE
Trigger: TTCCCAGCATCTGGAACTTCATGAGCCACCAAAAGC...ATGTGTAAGACTGGACCTCAATATGCTATCAGATTCTGAAAATTCCCAGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGCTTTTGGTGGCTCATaGAGTTCCAGATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILAFGGS*SSRCWE
Trigger: TTCCCAGCATCTGGAACTTCATGAGCCACCAAAAGC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAAACCTGCATGTCCTTTaGTGGGTCAGGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILNLHVL*WVREDT
Trigger: GGTATCTTCCCTGACCCATCAAAGGACATGCAGGTT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAATATATTACGGGACTaGTCTTGGGACTTACATGGT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASNILRD*SWDLHG
Trigger: ACCATGTAAGTCCCAAGATCAGTCCCGTAATATATT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GTCCAGTCTTACACATATTTCTGCTTCCCCACTTTGCTGACTAATGATACTCTGGTGTGCTGTGTTTCTTaGTCTCCAACCTTGATCACT +
Preference number: 4 (lower is better)
Translates to: VQSYTYFCFPTLLTNDTLVCCVS*SPTLIT
Trigger: AGTGATCAAGGTTGGAGATCAAGAAACACAGCACAC...CAGAGTATCATTAGTCAGCAAAGTGGGGAAGCAGAAATATGTGTAAGACTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456006.2
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTCCCAGGCAATTTCTaGTCTGACCTGAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLPGNF*SDLKVS
Trigger: AGACACTTTCAGGTCAGAGCAGAAATTGCCTGGGAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTCCCAGGCAATTTCTaGTCTGACCTGAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLPGNF*SDLKVS
Trigger: AGACACTTTCAGGTCAGAGCAGAAATTGCCTGGGAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAATATTGATTTGGGAGTaGCATCCTGCTGAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGILIWE*HPAEAD
Trigger: ATCCGCTTCAGCAGGATGGCACTCCCAAATCAATAT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGTAGTGGTAACAGGTaGAGTCTTCAGTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVCSGNR*SLQFGL
Trigger: CAGCCCAAACTGAAGACTGCACCTGTTACCACTACA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGAGATCCTGTTTTGGTaGAGCATCCTTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVEILFW*SILLWG
Trigger: TCCCCAAAGAAGGATGCTGCACCAAAACAGGATCTC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCACAGGTATACTTTTTaGAGGTGCTGGTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVHRYTF*RCWWCL
Trigger: CAAGCACCACCAGCACCTGCAAAAAGTATACCTGTG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCTTTGGAGCCACTCTaGCTTCAAGCTTTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSLEPL*LQAFLQ
Trigger: CTGAAGAAAAGCTTGAAGGCAGAGTGGCTCCAAAGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTCTTCTGTCGGAGATaGATCTTCAATGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLFCRR*IFNGRE
Trigger: CTCTCTCCCATTGAAGATGCATCTCCGACAGAAGAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGGGATAGAGAGTGTTaGACTGCTGGTCGAATCTGT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVWDREC*TAGRIC
Trigger: ACAGATTCGACCAGCAGTGCAACACTCTCTATCCCA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGGGCCAACTGGTAATTaGTTGACTAGCAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGGPTGN*LTSRRI
Trigger: GATTCTTCTGCTAGTCAAGCAATTACCAGTTGGCCC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGGTGGTGTCATTCTTaGTGTGGAATACTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVWWCHS*CGILWG
Trigger: ACCCCACAGTATTCCACAGCAAGAATGACACCACCA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATTGGCTGGCTATGGTaGATGGCAGGTAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVIGWLW*MAGNEV
Trigger: GACTTCATTACCTGCCATGCACCATAGCCAGCCAAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACCAACTGGTTCAGTTTaGACAGATATCTCTGCTACC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGPTGSV*TDISAT
Trigger: GGTAGCAGAGATATCTGTGCAAACTGAACCAGTTGG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTAGCCATATCTGGATaGAGTACTTTCTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALAISG*STFCGL
Trigger: AAGTCCACAGAAAGTACTGCATCCAGATATGGCTAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTAGCCATATCTGGATaGAGTACTTTCTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLAISG*STFCGL
Trigger: AAGTCCACAGAAAGTACTGCATCCAGATATGGCTAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGGCTGTCTTAGGACTTaGTGGGGGAACTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENGCLRT*WGNFSH
Trigger: ATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTGCTTGATATTGGACTaGTTGCCATGCTACTTCTTT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVCLILD*LPCYFF
Trigger: AAAGAAGTAGCATGGCAAGCAGTCCAATATCAAGCA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTGCTGGCAGTTGTTTTaGTGCTTGTTTTTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERCWQLF*CLFFKC
Trigger: ACACTTGAAAAACAAGCAGCAAAACAACTGCCAGCA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATATCTTGAAGGAGCCTTaGCCTGGAGGAAATGCCACC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYILKEP*PGGNAT
Trigger: GGTGGCATTTCCTCCAGGGCAAGGCTCCTTCAAGAT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAAGGTCTGGACCTGCTaGCACTACTGTATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVKVWTC*HYCMAY
Trigger: ATAAGCCATACAGTAGTGGCAGCAGGTCCAGACCTT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTCCATTCCAATACTTaGATCCCTTCCATAAGCTTC +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFFHSNT*IPSISF
Trigger: GAAGCTTATGGAAGGGATGCAAGTATTGGAATGGAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAACCTTCTGGAGTTCTaGTGCCAACTGCTTAGGATC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVNLLEF*CQLLRI
Trigger: GATCCTAAGCAGTTGGCAGCAGAACTCCAGAAGGTT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAGAACCAGCGGTGACTaGTGTAGTGAAACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENRTSGD*CSETFW
Trigger: CCAGAAGGTTTCACTACAGCAGTCACCGCTGGTTCT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTGACCAAAAGTTTGTaGCAGTTGACTATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALTKSL*QLTILF
Trigger: AAAAAGAATAGTCAACTGGCACAAACTTTTGGTCAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTCATACAAACTCTCATaGATACCTATGGATATGAGT +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASYKLS*IPMDMS
Trigger: ACTCATATCCATAGGTATGCATGAGAGTTTGTATGA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTCTCTGAAGGGGAATaGTGGTGCACAAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLSEGE*WCTKRS
Trigger: GCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCACACAACATTGCTTTaGTTCCAAACATCACAGACA +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFHTTLL*FQTSQT
Trigger: TGTCTGTGATGTTTGGAAGCAAAGCAATGTTGTGTG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAAGGACACACAACATTaGTTTGCTTCCAAACATCAC +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASKDTQH*FASKHH
Trigger: GTGATGTTTGGAAGCAAAGCAATGTTGTGTGTCCTT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGAGTCCTGAAATGCCATaGCCACAAAAGCACATTAAA +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERSPEMP*PQKHIK
Trigger: TTTAATGTGCTTTTGTGGGCATGGCATTTCAGGACT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCTTTAAATCAGTTCTaGACTTTGATTCTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPLNQF*TLILSS
Trigger: GCTTGAAAGAATCAAAGTCCAGAACTGATTTAAAGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATGGTTGCTGAATAGGTaGTTTGGATGGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILWLLNR*FGWAWQ
Trigger: CTGCCAAGCCCATCCAAACCACCTATTCAGCAACCA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAGGCTTTGTTGTCCCTaGTGGCTGGACTGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLRLCCP*WLDWGF
Trigger: AAACCCCCAGTCCAGCCACCAGGGACAACAAAGCCT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCCTGGCTGTTGAGCTaGAGTCTTTCCAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPWLLS*SLSNSR
Trigger: CCTGGAGTTGGAAAGACTCCAGCTCAACAGCCAGGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGAGAGATCCTGTTTTaGTGCAGCATCCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGEILF*CSILLW
Trigger: CCAAAGAAGGATGCTGCACCAAAACAGGATCTCTCC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGACAGAAGGTTCTTTaGGAGGGGCTGGCTTGGACA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGQKVL*EGLAWT
Trigger: TGTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTGGCTTTACCATCTTaGGCTGCTTTGGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERLALPS*AALVYH
Trigger: ATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCTTGTGACTGTACTTTaGAGCTTGGAATATCAGGTT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALVTVL*SLEYQV
Trigger: AACCTGATATTCCAAGCTCCAAAGTACAGTCACAAG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAGGGGCTTGTTTCATTaGGGCCCCTGGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLRGLFH*GPWSTL
Trigger: CAAAGTGGACCAGGGGCCCCAATGAAACAAGCCCCT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTTTGCAGGTGCTGGTaGTGCTTGACCTGTGGATTT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVFCRCW*CLTCGF
Trigger: AAATCCACAGGTCAAGCACCACCAGCACCTGCAAAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTCCATCTTGGTCTGTaGTTGTTTCCCTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGFHLGL*LFPFLH
Trigger: GTGCAAGAAGGGAAACAACCACAGACCAAGATGGAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTGTGCATGGTGGCTGTaGCTGTTCTTTTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPACAWWL*LFFYCF
Trigger: AAAACAATAAAAGAACAGCCACAGCCACCATGCACA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTGTGCATGGTGGCTGTaGCTGTTCTTTTATTGTTTT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERCAWWL*LFFYCF
Trigger: AAAACAATAAAAGAACAGCCACAGCCACCATGCACA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCTTCCCCTGATCCTTaGCTGTCTTCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSSPDP*LSSCLY
Trigger: GTATAAACAGGAAGACAGCCAAGGATCAGGGGAAGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAACAGTGTCAGCAACTaGCCCTTCAGGTTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGNSVSN*PFRFRY
Trigger: GTACCTAAACCTGAAGGGCCAGTTGCTGACACTGTT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTTTTGTGTAGTTGTTaGAAGCTGAGGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFLCSC*KLRNHW
Trigger: CCAGTGATTCCTCAGCTTCCAACAACTACACAAAAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTTTTGTGTAGTTGTTaGAAGCTGAGGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFFLCSC*KLRNHW
Trigger: CCAGTGATTCCTCAGCTTCCAACAACTACACAAAAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATACAATACTGGGGTCCTaGTGGTGGTGTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENTILGS*WWCHSC
Trigger: GCAAGAATGACACCACCACCAGGACCCCAGTATTGT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACATAGCTCCGATCTGTaGCATCTTCGTCATCCGTTT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGHSSDL*HLRHPF
Trigger: AAACGGATGACGAAGATGCCACAGATCGGAGCTATG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACTATGCTGGAGACTTTaGAAAGGGGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLCWRL*KGVWSC
Trigger: ACAAGACCAAACCCCTTTCCAAAGTCTCCAGCATAG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTTTGGGTGGAGATGTaGCACTCAGATATTGAGGAC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLWVEM*HSDIED
Trigger: GTCCTCAATATCTGAGTGCCACATCTCCACCCAAAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGTGAAAGTGGTGAGATaGGTGAGTAAAGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGVKVVR*VSKGLW
Trigger: CCAAAGTCCTTTACTCACCCATCTCACCACTTTCAC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTGAAAAGGAGCCCTaGAACTTTCGTCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTEKEP*NFRLLL
Trigger: CAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTGGATTGAGTTCCTGTaGAAATCTCCTCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVWIEFL*KSPQEV
Trigger: CACCTCCTGAGGAGATTTCCACAGGAACTCAATCCA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTGATAAGAAGGCTGTaGGGTTGGTGTAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLIRRL*GWCRLN
Trigger: GTTCAACCTACACCAACCCCACAGCCTTCTTATCAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGCTTTTGATAAAGTATaGCTGCTGGCAGTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAAFDKV*LLAVVL
Trigger: CAAAACAACTGCCAGCAGCCATACTTTATCAAAAGC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAGACAGAGGAAGGTCTaGAGGAAGGTCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLRQRKV*RKVWTC
Trigger: GCAGGTCCAGACCTTCCTCCAGACCTTCCTCTGTCT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTCTACTTTGACTAATTaGCAAACTGGTCGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVSTLTN*QTGRLS
Trigger: ACTAAGCCGACCAGTTTGCCAATTAGTCAAAGTAGA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAATCCAAACTGATCCCTaGTGTCTGCAGATATTGGTG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGIQTDP*CLQILV
Trigger: CACCAATATCTGCAGACACCAGGGATCAGTTTGGAT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTCAGAATAACCATTGTTGTCTCGAGGAACAAGATTTCTTGCTTGGAGAATATCTTAGGATCAACCCCTaGGGATTTCGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: GQNNHCCLEEQDFLLGEYLRINP*GFRLIH
Trigger: GTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAG...ATATTCTCCAAGCAAGAAATCTTGTTCCTCGAGACAACAATGGTTATTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGTAGTGAAACCTTCTaGAGTTCTGCTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVCSETF*SSAANC
Trigger: GCAGTTGGCAGCAGAACTCCAGAAGGTTTCACTACA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGCTTTTGATAACAGATaGCTTTGGGGACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGAFDNR*LWGLLA
Trigger: AGCCAGCAGTCCCCAAAGCCATCTGTTATCAAAAGC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGGATTTCTCAATGGTaGGAACCTGCATGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGISQW*EPACPL
Trigger: CAAAGGACATGCAGGTTCCCACCATTGAGAAATCCC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTGTGCTTTTACCACATaGATTCCAAAGTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPACAFTT*IPKSVL
Trigger: CAACACTGACTTTGGAATCCATGTGGTAAAAGCACA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCTGAAGGGGAATGCTaGTGCACAAAAAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSEGEC*CTKRSP
Trigger: AGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTTGCGTCTTTTACTTaGTTGAATGCGGAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERFASFT*LNAELL
Trigger: CAACAACTCCGCATTCAACCAAGTAAAAGACGCAAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGCCAGGTTGGATGGATaGTGGAAACAAAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGARLDG*WKQRRN
Trigger: GTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTAGAAGTTGACTGTTaGTTGCATTATCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLEVDC*LHYLLP
Trigger: AGGCAGAAGATAATGCAACCAACAGTCAACTTCTAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGTAAAGGAGGTTTTATaGTTCCTTCAGGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVVKEVL*FLQVFL
Trigger: AAGGAAAACCTGAAGGAATCATAAAACCTCCTTTAC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCTGCCTGTTTAGTCTaGGGCCTGGATGCATCTCGT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSACLV*GLDASR
Trigger: ACGAGATGCATCCAGGCCTCAGACTAAACAGGCAGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTTCTCTTCAGCTTGTaGCTGTACTTTGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVFLFSL*LYFGAW
Trigger: CCAAGCTCCAAAGTACAGTCACAAGCTGAAGAGAAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCAATTCTTCTTCCTCTaGAGAATCTTCAATAGTAGG +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFQFFFL*RIFNSR
Trigger: CCTACTATTGAAGATTCTTCAGAGGAAGAAGAATTG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAGATGTAGCACTTTCTaGAGGCTCCGAGTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENRCSTF*RLRVGQ
Trigger: TTGACCTACTCGGAGCCTTCAGAAAGTGCTACATCT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGGAGGAGGTTGAGCTaGTATATCCAAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGRRLS*YIQRRT
Trigger: AGTTCTTCTTTGGATATATCAGCTCAACCTCCTCCC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGGGAGGAGGTTGAGCTaGTATATCCAAAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGGRRLS*YIQRRT
Trigger: AGTTCTTCTTTGGATATATCAGCTCAACCTCCTCCC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGTACTTCTGGTTGCTaGAACCTCAGTCTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVCTSGC*NLSLGN
Trigger: GTTTCCAAGACTGAGGTTTCAGCAACCAGAAGTACA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGAGACTTGGTTGTACTaGGATCCACTACTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILETWLY*DPLLPH
Trigger: ATGGGGAAGTAGTGGATCTCAGTACAACCAAGTCTC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAATAACCATATGGCCCTaGTCGATCATACTGATAGTG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGITIWP*SIILIV
Trigger: CACTATCAGTATGATCGATCAGGGCCATATGGTTAT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAACCTGTAGTCTTGCTTaGATAATCCATTACCTCACC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGTCSLA*IIHYLT
Trigger: GGTGAGGTAATGGATTATTCAAGCAAGACTACAGGT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTAATCCCAGCTCCTaGAATGACTTGTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTNPSS*NDLSCF
Trigger: GAAACACGACAAGTCATTTCAGGAGCTGGGATTAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTCCTCCAACTTTTTCTaGACCATGATCTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVSSNFF*TMIFSC
Trigger: ACAAGAAAAGATCATGGTTCAGAAAAAGTTGGAGGA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAAGGAAGTCGTTGGATaGAAATCTATCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASKEVVG*KSIIIP
Trigger: TGGGATTATGATAGATTTTCATCCAACGACTTCCTT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTTCAGTCTGTTCTTTaGGAGGATACCACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVFQSVL*EDTTLE
Trigger: CTCCAAGGTGGTATCCTCTCAAAGAACAGACTGAAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAACCTGCATGTCCTTTaGTGGGTCAGGGAAGATACC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYNLHVL*WVREDT
Trigger: GGTATCTTCCCTGACCCATCAAAGGACATGCAGGTT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAAGAGTAAAGATAACTaGTGCCCCTTAGTCTTGATA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAKSKDN*CPLVLI
Trigger: TATCAAGACTAAGGGGCATCAGTTATCTTTACTCTT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTAATCTGATAGCATATTaGGGTCCACATATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVNLIAY*GPHISA
Trigger: AGCAGAAATATGTGGACCTCAATATGCTATCAGATT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618073.1
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAGTCTGAGGCCTGGATaGATCTCGTTGAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYSLRPG*ISLKWQ
Trigger: TTGCCACTTCAACGAGATGCATCCAGGCCTCAGACT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATTTTCATGTCCAGGCTaGTGTGCTGGAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILFSCPG*CAGGFP
Trigger: TGGAAAACCTCCAGCACAGCAGCCTGGACATGAAAA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGACACTGTTGGTGGCTaGAGAGGTTTTCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYDTVGG*RGFPDP
Trigger: AGGATCTGGAAAACCTCTGCAGCCACCAACAGTGTC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTACTCATTTTGGTTTGTaGTTTCTTGGGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASTHFGL*FLGFFL
Trigger: AAGGAAGAACCCAAGAAAGCACAAACCAAAATGAGT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGTGCAGGTGGCATTTTaGGTATGTCTCCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYVQVAF*VCLQAV
Trigger: GACAGCTTGGAGACATACGCAAAATGCCACCTGCAC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGTAAACTCTGAGGTGTaGCAGATGGTAAACCTTCCA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVVNSEV*QMVNLP
Trigger: TGGAAGGTTTACCATCTGGCACACCTCAGAGTTTAC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACACCTGATCAGGTTTTaGTGTGCATGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLHLIRF*CAWWLW
Trigger: CCACAGCCACCATGCACAGCAAAACCTGATCAGGTG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAAGGGGCTGGAAGGGCTaGTTTCTTGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILRGWKG*FLVKKS
Trigger: ACTCTTTTTCACAAGAAAGCAGCCCTTCCAGCCCCT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTCTCTTTATGGTCCTTaGTGGAAGGAATATCTTGTT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPASLYGP*WKEYLV
Trigger: AACAAGATATTCCTTCCAGCAAGGACCATAAAGAGA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTCTCTTTATGGTCCTTaGTGGAAGGAATATCTTGTT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERSLYGP*WKEYLV
Trigger: AACAAGATATTCCTTCCAGCAAGGACCATAAAGAGA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGGAAACAGAAGGACTaGCAGATGGTAACTGAGATG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVRKQKD*QMVTEM
Trigger: CATCTCAGTTACCATCTGGCAGTCCTTCTGTTTCCT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTCATTTGCTGTGATCTaGCTTTTCACATCCATTGTA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPASFAVI*LFTSIV
Trigger: TACAATGGATGTGAAAAGGCAGATCACAGCAAATGA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTGGTGGTGTCATTCTTaGTGTGGAATACTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENWWCHS*CGILWG
Trigger: ACCCCACAGTATTCCACAGCAAGAATGACACCACCA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATATTGGCTGGCTATGGTaGATGGCAGGTAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENIGWLW*MAGNEV
Trigger: GACTTCATTACCTGCCATGCACCATAGCCAGCCAAT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGTTGCTTCATAGACTaGAGCTCCTCCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGCCFID*SSSNFF
Trigger: GAAAAAGTTGGAGGAGCTGCAGTCTATGAAGCAACA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATGCAGCTGTTGGATCTaGTCAAGCTGTAACTGTTGC +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILCSCWI*SSCNCC
Trigger: GCAACAGTTACAGCTTGAGCAGATCCAACAGCTGCA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGTTGCATCTTCAGTTaGCCAAAATTGACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGCIFS*PKLTAF
Trigger: GAAGGCAGTCAATTTTGGGCAACTGAAGATGCAACC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTTGACATCCTAAACTaGCCCCTTTGTAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFDILN*PLCKSF
Trigger: AAAAGACTTACAAAGGGGGCAGTTTAGGATGTCAAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGACATCCTAAACTaGCCCCTTTGTAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVFDILN*PLCKSF
Trigger: AAAAGACTTACAAAGGGGGCAGTTTAGGATGTCAAA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGAGAATCTTGGCTCGTaGCATTGTGTTGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILENLGS*HCVGSA
Trigger: TGCAGAACCAACACAATGGCACGAGCCAAGATTCTC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATGTGAAGGACATTGTTaGCACAGCTTGGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGCEGHC*HSLECW
Trigger: CCAACATTCCAAGCTGTGGCAACAATGTCCTTCACA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAATCCGTAGAAACAGGTaGTATCATAAGGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGIRRNR*YHKGLV
Trigger: AACCAACCCCTTATGATAGCACCTGTTTCTACGGAT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTATCCGCTTCATCCTaGAGAGCTGAGCGTATGGTA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLSASS*RAERMV
Trigger: TACCATACGCTCAGCTCTGCAGGATGAAGCGGATAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GGTCAGAATAACCATTGTTGTCTCGAGGAACAAGATTTCTTGCTTGGAGAATATAACCTTCTGGAGTTCTaGTGCCAACTGCTTAGGATC +
Preference number: 4 (lower is better)
Translates to: GQNNHCCLEEQDFLLGEYNLLEF*CQLLRI
Trigger: GATCCTAAGCAGTTGGCAGCAGAACTCCAGAAGGTT...ATATTCTCCAAGCAAGAAATCTTGTTCCTCGAGACAACAATGGTTATTCTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAACCTTCTGGAGTTCTaGTGCCAACTGCTTAGGATC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENNLLEF*CQLLRI
Trigger: GATCCTAAGCAGTTGGCAGCAGAACTCCAGAAGGTT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTGGGGACTGCTGGCTaGTCTGACTGGAATGAGACT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLGTAG*SDWNET
Trigger: AGTCTCATTCCAGTCAGAGCAGCCAGCAGTCCCCAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTGGTTTTGCTTTGACTaGGAGATGGTCCATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVWFCFD*EMVHEN
Trigger: GTTCTCATGGACCATCTCGCAGTCAAAGCAAAACCA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCAAGTGCTAGCTTCTaGTGGAAATATCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSSASF*WKYPWQ
Trigger: TTGCCATGGATATTTCCAGCAGAAGCTAGCACTTGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGTAGGACCCTGAATTaGCTTTCCTGTACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGRTLN*LSCTWR
Trigger: CCTCCAGGTACAGGAAAGCCAATTCAGGGTCCTACC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTTCCAGATCCTGTTTaGCTTACTGGTTTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFPDPV*LTGFVD
Trigger: ATCTACAAAACCAGTAAGCCAAACAGGATCTGGAAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGAGACTACAGACAGTaGTTTGACACTCAGTGCATG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVRDYRQ*FDTQCM
Trigger: CATGCACTGAGTGTCAAACCACTGTCTGTAGTCTCT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCTGTACTTTGGAGCTTaGAATATCAGGTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLYFGA*NIRFCC
Trigger: ACAACAAAACCTGATATTCCAAGCTCCAAAGTACAG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGGTTTGTGCTTTCTTaGGTTCTTCCTTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFWFVLS*VLPSFV
Trigger: TACAAAAGAAGGAAGAACCCAAGAAAGCACAAACCA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATTTTGCAGGTGCTGGTaGTGCTTGACCTGTGGATTT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILFCRCW*CLTCGF
Trigger: AAATCCACAGGTCAAGCACCACCAGCACCTGCAAAA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAATCTCAGTCAAATGTaGTGTAGGGTTAAATCCACA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPANLSQM*CRVKST
Trigger: TGTGGATTTAACCCTACACCACATTTGACTGAGATT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCTAATCTCTTTGAGCTaGTTTCTGATGAACTCATCA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALISLS*FLMNSS
Trigger: TGATGAGTTCATCAGAAACCAGCTCAAAGAGATTAG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAGAGAGATTACTAGGTaGTGTCTTTGGCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVREITR*CLWPFP
Trigger: AGGGAAAGGCCAAAGACACCACCTAGTAATCTCTCT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAATAGGCCTGTTGGTTTaGGGTGTATATCTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGIGLLV*GVYLLV
Trigger: AACCAACAGATATACACCCCAAACCAACAGGCCTAT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAAGCAGAAGAATCTGTTaGAGTCCCTGGTTCAGATGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILSRRIC*SPWFRW
Trigger: CCATCTGAACCAGGGACTCCAACAGATTCTTCTGCT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAGGTCACTGTCTCAGTaGCCAGAGATACAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYRSLSQ*PEIQES
Trigger: TGACTCCTGTATCTCTGGCCACTGAGACAGTGACCT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTTGATGTTGTAAGTTaGAGTGGTGTTGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFDVVS*SGVVIA
Trigger: TGCAATGACAACACCACTCCAACTTACAACATCAAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTGCTGTGGAATACTGTaGGGTACTAATCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYCCGIL*GTNPSS
Trigger: GGAGCTGGGATTAGTACCCCACAGTATTCCACAGCA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGACACTTCGGATGCTGTaGTTAAAGTGGGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVTLRML*LKWEQS
Trigger: ACTCTGTTCCCACTTTAACCACAGCATCCGAAGTGT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGTTGTTGCAGCTGTTaGATCTGCTCAAGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVCCCSC*ICSSCN
Trigger: GTTACAGCTTGAGCAGATCCAACAGCTGCAACAACA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCTCTGTAGTGGTTTGTaGAGAAGCAGTTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLCSGL*RSSSRR
Trigger: CCTTCTGGAACTGCTTCTCCACAAACCACTACAGAG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCTTCATCATCAGTTTaGACGCTTGTATCCACACTC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSSSSV*TLVSTL
Trigger: GAGTGTGGATACAAGCGTCCAAACTGATGATGAAGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACTTTGGAAAGGGGTTTaGTCTTGTCAGCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILLWKGV*SCQPLS
Trigger: TGACAGAGGCTGACAAGACCAAACCCCTTTCCAAAG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGTCTTAGGACTTGCTaGGGGAACTTTAGCCATATC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVCLRTC*GNFSHI
Trigger: GATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATATGAGGTGGGTGCTTaGGTAGGAAGAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLYEVGA*VGRAGE
Trigger: TTCCCCTGCTCTTCCTACCCAAGCACCCACCTCATA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGCAGAGCTGAGCGTATaGTATTTCCTAATGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILAELSV*YFLMCP
Trigger: TGGGCACATTAGGAAATACCATACGCTCAGCTCTGC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGCTGCCACTACTGTATaGCTTATCCGCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYAATTV*LIRFIL
Trigger: CAGGATGAAGCGGATAAGCCATACAGTAGTGGCAGC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTTCACTGTCTGACATaGCATGTTGGAAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLHCLT*HVGSHP
Trigger: TGGATGACTTCCAACATGCCATGTCAGACAGTGAAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTGAGTGGTCTAGAGTaGACCAATCTTTCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLSGLE*TNLSGS
Trigger: ACTGCCGGAAAGATTGGTCCACTCTAGACCACTCAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GTCCAGTCTTACACATATTTCTGCTTCCCCACTTTGCTGACTAATGATACTCTGCCCCAGGAAGAATCTTaGCAATATAGGCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: VQSYTYFCFPTLLTNDTLPQEES*QYRLQF
Trigger: AAATTGGAGCCTATATTGCCAAGATTCTTCCTGGGG...CAGAGTATCATTAGTCAGCAAAGTGGGGAAGCAGAAATATGTGTAAGACTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTTAGGATCAACCCCTaGGGATTTCGCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLRINP*GFRLIH
Trigger: GTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATGTAGTGAAACCTTCTaGAGTTCTGCTGCCAACTGC +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILCSETF*SSAANC
Trigger: GCAGTTGGCAGCAGAACTCCAGAAGGTTTCACTACA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGATTAAGACTTTTCTaGACATGTTTAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFGLRLF*TCLVLL
Trigger: GAGAAGGACTAAACATGTCCAGAAAAGTCTTAATCC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGGATTAAGACTTTTCTaGACATGTTTAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVGLRLF*TCLVLL
Trigger: GAGAAGGACTAAACATGTCCAGAAAAGTCTTAATCC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCCCCAAGGAAGTCGTTaGATGAAAATCTATCATAAT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERPQGSR*MKIYHN
Trigger: ATTATGATAGATTTTCATCCAACGACTTCCTTGGGG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGAGAGGATACCACCTTaGAGTGTTATCGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILERIPP*SVIEVR
Trigger: TCTCACCTCGATAACACTCCAAGGTGGTATCCTCTC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGTGCTAGCTTCTGCTaGAAATATCCATGGCAACCA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSASFC*KYPWQP
Trigger: TGGTTGCCATGGATATTTCCAGCAGAAGCTAGCACT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATACAACCTAGAAGTTTaGTCAGCTGCAAACTTGGCA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGYNLEV*SAANLA
Trigger: TGCCAAGTTTGCAGCTGACCAAACTTCTAGGTTGTA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTCCCAGATTCAGACTaGAACGCCTTGACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLFPDSD*NALTAP
Trigger: AGGAGCAGTCAAGGCGTTTCAGTCTGAATCTGGGAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAGGAGTTGTAGGCTGTaGTTTGGGGGCATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYRSCRL*FGGISN
Trigger: ATTACTGATGCCCCCAAATCACAGCCTACAACTCCT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGGGCTGCTTTCTTGTaGAAAAGAGTCCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVRAAFL*KRVLFE
Trigger: CTCAAAAAGGACTCTTTTTCACAAGAAAGCAGCCCT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGCAAGTGTACTTGCTTaGGCTTCCAAAATAGATAGG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGASVLA*ASKIDR
Trigger: CCTATCTATTTTGGAAGCTCAAGCAAGTACACTTGC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCTTTCCCTTCTTCTCTaGGCTCGAAGTTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLSLLL*ARSSSL
Trigger: CAAAGATGAACTTCGAGCTCAGAGAAGAAGGGAAAG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAACCTGTAGTCTTGCTTaGATAATCCATTACCTCACC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGTCSLA*IIHYLT
Trigger: GGTGAGGTAATGGATTATTCAAGCAAGACTACAGGT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTCCCAGCTCCTGAAATaGCTTGTCGTGTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYSQLLK*LVVFLD
Trigger: ATCCAGAAACACGACAAGTCATTTCAGGAGCTGGGA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATACTAATCCCAGCTCCTaGAATGACTTGTCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENTNPSS*NDLSCF
Trigger: GAAACACGACAAGTCATTTCAGGAGCTGGGATTAGT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATACTGCATCAGCCGTATaGATACCAGACAAATCCCTC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYTASAV*IPDKSL
Trigger: GAGGGATTTGTCTGGTATTCATACGGCTGATGCAGT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATATCCCACTCATCCTaGTCTTCATCATCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVISHSS*SSSSVW
Trigger: CCAAACTGATGATGAAGATCAGGATGAGTGGGATAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAATATCCCACTCATCCTaGTCTTCATCATCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGISHSS*SSSSVW
Trigger: CCAAACTGATGATGAAGATCAGGATGAGTGGGATAT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATATCTCTGCTACCGTTTaGACTGCTATGCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYISATV*TAMLET
Trigger: AGTCTCCAGCATAGCAGTTCAAACGGTAGCAGAGAT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTGAGTCTGATAAGGTaGAACTTGCTGATGGTACAA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLSLIR*NLLMVQ
Trigger: TTGTACCATCAGCAAGTTTCACCTTATCAGACTCAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGATCTGCAGATATGCTTaGTATTGGACTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVICRYA*YWTACH
Trigger: ATGGCAAGCAGTCCAATATCAAGCATATCTGCAGAT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGGCTTGATCCAAACTaGTCCCTGGTGTCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLWLDPN*SLVSAD
Trigger: ATCTGCAGACACCAGGGATCAGTTTGGATCAAGCCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAATAGCCTCGAGTCCGTaGTTCTTCCCTCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLIASSP*FFPHVL
Trigger: CAACACATGAGGGAAGAATCACGGACTCGAGGCTAT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACATTCTGGACAACCATaGCTTGACCTCTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLHSGQP*LDLSLE
Trigger: TTCCAGGGAGAGGTCAAGTCATGGTTGTCCAGAATG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGAGTGTTATCGAGGTaGGATGTGCTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGVLSR*DVLDKS
Trigger: TGATTTATCTAGCACATCTCACCTCGATAACACTCC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAATCACATACAAAGTGTaGTCCAACAGAATGGACCCA +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGITYKV*SNRMDP
Trigger: TGGGTCCATTCTGTTGGATCACACTTTGTATGTGAT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAGTCTGAGGCCTGGATaGATCTCGTTGAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSLRPG*ISLKWQ
Trigger: TTGCCACTTCAACGAGATGCATCCAGGCCTCAGACT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTATACTTTTTGCAGGTaGTGGTGGTGCTTGACCTGT +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENYTFCR*WWCLTC
Trigger: ACAGGTCAAGCACCACCAGCACCTGCAAAAAGTATA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGTAAACTCTGAGGTGTaGCAGATGGTAAACCTTCCA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILVNSEV*QMVNLP
Trigger: TGGAAGGTTTACCATCTGGCACACCTCAGAGTTTAC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCGTCTGTGTTTCCCTaGTGTTATTTTGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSSVFP*CYFAFS
Trigger: GGAAAAGGCAAAATAACAGCAGGGAAACACAGACGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTGCAGAATATTTATCTaGTATTGTACTGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPACRIFI*YCTVEL
Trigger: GAGCTCAACAGTACAATAGCAGATAAATATTCTGCA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTGCCGAGCTTTGCGTTaGTGTTTGCTCTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYCRALR*CLLSPF
Trigger: AAAAGGAGAGAGCAAACAGCAACGCAAAGCTCGGCA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGTTAATTGCATCTGTTaGCTCTTCATAAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVVNCIC*LFISSS
Trigger: TGAAGAACTTATGAAGAGGCAACAGATGCAATTAAC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGATCCAGGTGTTAATTaGATCTGTTGCCTCTTCATA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGDPGVN*ICCLFI
Trigger: TATGAAGAGGCAACAGATGCAATTAACACCTGGATC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAGGAAACAGAAGGACTaGCAGATGGTAACTGAGATG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENRKQKD*QMVTEM
Trigger: CATCTCAGTTACCATCTGGCAGTCCTTCTGTTTCCT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCCAAGTCTAGCTGCTaGTGTTGTTTATCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSKSSC*CCLSSS
Trigger: TGAAGAAGATAAACAACAGCAGCAGCTAGACTTGGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCAGCAAAGCGCTGTTaGTTAATTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSAKRC*LIFSSS
Trigger: GGAACTGGAGAAAATTAAGCAACAGCGCTTTGCTGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTCTTCATCAAGCTCTaGTTGTTTCTTTCGAAGTTT +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERFFIKL*LFLSKF
Trigger: AAACTTCGAAAGAAACAAGCAGAGCTTGATGAAGAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTTCGGGTTGGTCTTGTaGTACTCACTTCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYFGLVL*YSLHCQ
Trigger: CTGACAGTGAAGTGAGTAGCACAAGACCAACCCGAA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTCTTGGTCGCTCAATaGCATGCTGACTTTCTATTC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVFLVAQ*HADFLF
Trigger: GAATAGAAAGTCAGCATGGCATTGAGCGACCAAGAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTGGACTGCTTGCCATaGTACTTCTTTCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLDCLP*YFFPPN
Trigger: GTTTGGAGGAAAGAAGTAGCATGGCAAGCAGTCCAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTATGGTGATCAATATCTaGATAGAAAGAATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAMVINI*IERICR
Trigger: TCTGCAGATTCTTTCTATGCAGATATTGATCACCAT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTATGGTGATCAATATCTaGATAGAAAGAATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KCYEPGWMDGGNKGETASMVINI*IERICR
Trigger: TCTGCAGATTCTTTCTATGCAGATATTGATCACCAT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAAGGTCTGGACCTGCTaGCACTACTGTATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYKVWTC*HYCMAY
Trigger: ATAAGCCATACAGTAGTGGCAGCAGGTCCAGACCTT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTCCATTCCAATACTTaGATCCCTTCCATAAGCTTC +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGFHSNT*IPSISF
Trigger: GAAGCTTATGGAAGGGATGCAAGTATTGGAATGGAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGCTTTGTTGGTTGAATaGGGAGTTGTTGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLALLVE*GVVARQ
Trigger: CTGCCGTGCAACAACTCCGCATTCAACCAACAAAGC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTGTGGCTAATTTACTaGTTTTATCCATGTCAATCC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALWLIY*FYPCQS
Trigger: GGATTGACATGGATAAAAGCAGTAAATTAGCCACAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAACTTGGAGATTCACATaGCCAACACATCTGATACAC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGTWRFT*PTHLIH
Trigger: GTGTATCAGATGTGTTGGGCATGTGAATCTCCAAGT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCCTTTAAATCAGTTCTaGACTTTGATTCTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: DREQGEQRMLKTESKQERPLNQF*TLILSS
Trigger: GCTTGAAAGAATCAAAGTCCAGAACTGATTTAAAGG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCCACTTTTTGTTTCTTaGTGGTTTCTTCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVPLFVS*WFLPGM
Trigger: CATCCCAGGAAGAAACCACCAAGAAACAAAAAGTGG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGAGAAGATATTGATTTaGGAGTGCCATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVEKILI*ECHPAE
Trigger: TTCAGCAGGATGGCACTCCCAAATCAATATCTTCTC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAGATGGAGACACTGTTaGTGGCTGCAGAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLRWRHC*WLQRFS
Trigger: GGAAAACCTCTGCAGCCACCAACAGTGTCTCCATCT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGCAACAGAAGTTCAGTaGTATTGCAAAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVATEVQ*YCKEDR
Trigger: TCTGTCCTCTTTGCAATACCACTGAACTTCTGTTGC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTTGTCCTGCTCAGATaGGACAGAAGGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLVLLR*DRRFFG
Trigger: CCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACATCTTGGGCTGCTTTaGTTTATCATCAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILHLGLL*FIISNR
Trigger: CCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAACTCTGTGAGGGTTTaGCAGAGTCTGTTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVNSVRV*QSLFLE
Trigger: CTCTAAAAACAGACTCTGCCAAACCCTCACAGAGTT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGAGCTTGTTCAGCTTTaGGCTCTAATTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVELVQL*ALIFQL
Trigger: CAGCTGAAAAATTAGAGCCCAAAGCTGAACAAGCTC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATTTCTCCAGTTTTGTaGGAAGGACAGCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVISPVL*EGQPFE
Trigger: CTCAAAAGGCTGTCCTTCCCACAAAACTGGAGAAAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAATTTCTCCAGTTTTGTaGGAAGGACAGCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGISPVL*EGQPFE
Trigger: CTCAAAAGGCTGTCCTTCCCACAAAACTGGAGAAAT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTCCATCTTGGTCTGTaGTTGTTTCCCTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENFHLGL*LFPFLH
Trigger: GTGCAAGAAGGGAAACAACCACAGACCAAGATGGAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTCCATTTCCAATTCTaGCTCTTCGTCAAAATACAA +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFFHFQF*LFVKIQ
Trigger: TTGTATTTTGACGAAGAGCCAGAATTGGAAATGGAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAGTTATCATGTCCACTaGCTCTGTATAAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSYHVH*LCINCG
Trigger: ACCACAGTTTATACAGAGCCAGTGGACATGATAACT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTACACTTATTTCTTCTaGATAGTCTATAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAYTYFF*IVYNAA
Trigger: GGCAGCATTATAGACTATCCAGAAGAAATAAGTGTA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACTTGGCTTTCTTCACTaGGTCCTTTTCAGATATAAG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLGFLH*VLFRYK
Trigger: CTTATATCTGAAAAGGACCCAGTGAAGAAAGCCAAG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAGAACTTCTAAAGAATaGGCGAGGTTTAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVRTSKE*ARFSWK
Trigger: CTTCCAGCTAAACCTCGCCCATTCTTTAGAAGTTCT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCATCAGTGATTCCCTaGGATACGGTGCTATCAGTC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPSVIP*DTVLSV
Trigger: GACTGATAGCACCGTATCCCAGGGAATCACTGATGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAATTTGTGTCAGACATaGAAGGCTTCATTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVNLCQT*KASFPQ
Trigger: TTGGGGGAATGAAGCCTTCCATGTCTGACACAAATT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGCTGTGGAATACTGTaGGGTACTAATCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCCGIL*GTNPSS
Trigger: GGAGCTGGGATTAGTACCCCACAGTATTCCACAGCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAACAATACTGGGGTCCTaGTGGTGGTGTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLTILGS*WWCHSC
Trigger: GCAAGAATGACACCACCACCAGGACCCCAGTATTGT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATGCTGTGGTTAAAGTaGGAACAGAGTCTATCGTCT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVMLWLK*EQSLSS
Trigger: AGACGATAGACTCTGTTCCCACTTTAACCACAGCAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAACACTTCGGATGCTGTaGTTAAAGTGGGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILTLRML*LKWEQS
Trigger: ACTCTGTTCCCACTTTAACCACAGCATCCGAAGTGT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCCATCCTTGGCTTTGTaGTATTTCAATTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVPSLAL*YFNCHN
Trigger: GTTGTGGCAATTGAAATACCACAAAGCCAAGGATGG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGCTCAGGATACCAGGTaGGGCAATGTACTGAGTAAC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLAQDTR*GNVLSN
Trigger: GTTACTCAGTACATTGCCCCACCTGGTATCCTGAGC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGTGAAAGTGGTGAGATaGGTGAGTAAAGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILVKVVR*VSKGLW
Trigger: CCAAAGTCCTTTACTCACCCATCTCACCACTTTCAC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGCAGATCCTTCTCCTaGAAACTGTGCCCATTGTGC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCRSFS*KLCPLC
Trigger: GCACAATGGGCACAGTTTCCAGGAGAAGGATCTGCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTTTCTATTCGGGTTaGTCTTGTGCTACTCACTTC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTFYSG*SCATHF
Trigger: GAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTACTTACTACCAAGATaGGAAACAGCAAATGTGTTA +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAYLLPR*ETANVL
Trigger: TAACACATTTGCTGTTTCCCATCTTGGTAGTAAGTA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTACTTACTACCAAGATaGGAAACAGCAAATGTGTTA +
Preference number: 4 (lower is better)
Translates to: CYEPGWMDGGNKGETASFYLLPR*ETANVL
Trigger: TAACACATTTGCTGTTTCCCATCTTGGTAGTAAGTA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCTACTTTGACTAATTaGCAAACTGGTCGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSTLTN*QTGRLS
Trigger: ACTAAGCCGACCAGTTTGCCAATTAGTCAAAGTAGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAATCCAAACTGATCCCTaGTGTCTGCAGATATTGGTG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILIQTDP*CLQILV
Trigger: CACCAATATCTGCAGACACCAGGGATCAGTTTGGAT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCTTCACTGTCTGACATaGCATGTTGGAAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLHCLT*HVGSHP
Trigger: TGGATGACTTCCAACATGCCATGTCAGACAGTGAAG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACCAAACGAGACTCCCTaGGTTTATCAAACCAATCTG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILPNETP*VYQTNL
Trigger: CAGATTGGTTTGATAAACCCAGGGAGTCTCGTTTGG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCCCCAGGAAGAATCTTaGCAATATAGGCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVPQEES*QYRLQF
Trigger: AAATTGGAGCCTATATTGCCAAGATTCTTCCTGGGG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGATGCTGGGAATTTTCAGAATCTGATAGCATATTGAGGTCCAGTCTTACACATATCCACAGCTTTTGGTaGCTCATGAAGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: RCWEFSESDSILRSSLTHIHSFW*LMKFQM
Trigger: CATCTGGAACTTCATGAGCCACCAAAAGCTGTGGAT...ATGTGTAAGACTGGACCTCAATATGCTATCAGATTCTGAAAATTCCCAGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACTACCAGGACTACTATaGGATTTCTCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILLPGLL*DFSMVG
Trigger: TCCCACCATTGAGAAATCCCATAGTAGTCCTGGTAG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAAAACTGGTAAAATATaGCCTGAAAGCCACAATTTC +
Preference number: 4 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAKTGKI*PESHNF
Trigger: GAAATTGTGGCTTTCAGGCCATATTTTACCAGTTTT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACCTATGGATATGAGTaGCTGCAAAAGAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTYGYE*LQKRIR
Trigger: TCTGATCCTCTTTTGCAGCCACTCATATCCATAGGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATGTGATCCAACAGAATaGACCCAATTGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILCDPTE*TQLCSS
Trigger: TGAGGAGCACAATTGGGTCCATTCTGTTGGATCACA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTTACCTCCGTTAAATaGGGATTGGGATTAAAACCA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGFTSVK*GLGLKP
Trigger: TGGTTTTAATCCCAATCCTCATTTAACGGAGGTAAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTTTCTCTTCAGCTTGTaGCTGTACTTTGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYFLFSL*LYFGAW
Trigger: CCAAGCTCCAAAGTACAGTCACAAGCTGAAGAGAAA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAATTTGATGCCTGGCTaGAGATTGATGCTCCAAACC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYNLMPG*RLMLQT
Trigger: GGTTTGGAGCATCAATCTTCAGCCAGGCATCAAATT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAAACAAAGCCATTCTTaGATCTCAGTCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGKQSHS*ISVKCG
Trigger: ACCACATTTGACTGAGATTCAAGAATGGCTTTGTTT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTACTCTCTTCAACTaGATCATAAGGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTTLFN*IIRLSS
Trigger: AGAAGAGAGCCTTATGATTCAGTTGAAGAGAGTAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCTTTGTGGAACAGGTaGGTTTTCACTTTCACTACT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSLWNR*VFTFTT
Trigger: AGTAGTGAAAGTGAAAACTCACCTGTTCCACAAAGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGATGATAAAAGAGCTTaGAACAATATCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGDDKRA*NNIFLR
Trigger: CCTCAGGAAGATATTGTTTCAAGCTCTTTTATCATC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAGATGTAGCACTTTCTaGAGGCTCCGAGTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLRCSTF*RLRVGQ
Trigger: TTGACCTACTCGGAGCCTTCAGAAAGTGCTACATCT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGACCGAAGAAACAGATaGTGTGAGAGAAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLDRRNR*CERRCV
Trigger: GACACACCTTCTCTCACATCATCTGTTTCTTCGGTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCAACTGGTAATTGCTTaGCTAGCAGAAGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVQLVIA*LAEESV
Trigger: AACAGATTCTTCTGCTAGTCAAGCAATTACCAGTTG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGAGAAACTGTGTAACTaGTGTGGGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYEKLCN*CGSCLK
Trigger: TTTCAAGCAGCTCCCACATCAGTTACACAGTTTCTC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTGTACTTCTGGTTGCTaGAACCTCAGTCTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYCTSGC*NLSLGN
Trigger: GTTTCCAAGACTGAGGTTTCAGCAACCAGAAGTACA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATATAACCATATGGCCCTaGTCGATCATACTGATAGTG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENITIWP*SIILIV
Trigger: CACTATCAGTATGATCGATCAGGGCCATATGGTTAT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCCCAGCTCCTGAAATaGCTTGTCGTGTTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSQLLK*LVVFLD
Trigger: ATCCAGAAACACGACAAGTCATTTCAGGAGCTGGGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCCTCCAACTTTTTCTaGACCATGATCTTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSSNFF*TMIFSC
Trigger: ACAAGAAAAGATCATGGTTCAGAAAAAGTTGGAGGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGTCGGAGGAACTAGTTaGGATTCTGTTTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYVGGTS*DSVWVC
Trigger: ACAAACCCAAACAGAATCTCAACTAGTTCCTCCGAC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCTGAGTCTGATAAGGTaGAACTTGCTGATGGTACAA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLSLIR*NLLMVQ
Trigger: TTGTACCATCAGCAAGTTTCACCTTATCAGACTCAG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAATCACTTCATAGTTTaGGGTTATCTTGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVNHFIV*GYLGLQ
Trigger: TTGGAGCCCAAGATAACCTCAAACTATGAAGTGATT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACCAGTGTTTTCTTCTTaGGCTGTTCCATGGAAATAC +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILPVFSS*AVPWKY
Trigger: GTATTTCCATGGAACAGCTCAAGAAGAAAACACTGG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGGAGTGTTATCGAGGTaGGATGTGCTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILGVLSR*DVLDKS
Trigger: TGATTTATCTAGCACATCTCACCTCGATAACACTCC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATTTCTCCCATTACCTaGGTTTTAGCTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVISPIT*VLASVS
Trigger: AGACACTGAAGCTAAAACTCAGGTAATGGGAGAAAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATTGAAGTGGCAATTTTaGATGGTCTGTCTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILLKWQF*MVCLRS
Trigger: ACTCCTCAGACAGACCATGCAAAATTGCCACTTCAA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGAAGTTCAGTGGTATTaGAAAGAGGACAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVEVQWY*KEDRWF
Trigger: AAACCATCTGTCCTCTTTGCAATACCACTGAACTTC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTTACCATCTTGGGCTaGTTTGGTTTATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVFTILG*FGLSSA
Trigger: TGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTTGTTTTTGACCTTTaGTCTCTGAACTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLVFDL*SLNWDQ
Trigger: CTGGTCCCAGTTCAGAGAGCAAAGGTCAAAAACAAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAACTCATTTTGGTTTGTaGTTTCTTGGGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGTHFGL*FLGFFL
Trigger: AAGGAAGAACCCAAGAAAGCACAAACCAAAATGAGT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAGGGGCTGGAAGGGCTaGTTTCTTGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLRGWKG*FLVKKS
Trigger: ACTCTTTTTCACAAGAAAGCAGCCCTTCCAGCCCCT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTTCATCAATGCTTGTaGTACTTTTTCGAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLHQCL*YFFESV
Trigger: GACTGACTCGAAAAAGTAGCACAAGCATTGATGAAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTCCCTGGGATACGGTaGTATCAGTCCATCCATTTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLFPGIR*YQSIHL
Trigger: CAAATGGATGGACTGATAGCACCGTATCCCAGGGAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTGTTGCTTCATAGACTaGAGCTCCTCCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENCCFID*SSSNFF
Trigger: GAAAAAGTTGGAGGAGCTGCAGTCTATGAAGCAACA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGCAGCTGTTGGATCTaGTCAAGCTGTAACTGTTGC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCSCWI*SSCNCC
Trigger: GCAACAGTTACAGCTTGAGCAGATCCAACAGCTGCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCCTTCCAAAATTGCCTaGTCTGTAGTGGTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYPSKIA*SVVVCG
Trigger: TCCACAAACCACTACAGAGCAGGCAATTTTGGAAGG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCGTTTGAACTGCTATaGTGGAGACTTTGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPFELL*WRLWKG
Trigger: CCCTTTCCAAAGTCTCCAGCATAGCAGTTCAAACGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTTCTTTCGAAGTTTTaGAGACTCCCTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVFLSKF*RLPFHK
Trigger: CTTGTGGAAAGGGAGTCTGCAAAACTTCGAAAGAAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCAATGGTGGGAACCTaGATGTCCTTTGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSMVGT*MSFDGS
Trigger: TGACCCATCAAAGGACATGCAGGTTCCCACCATTGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCCCACTCTTATGTTTaGCTCTCAAAACTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSHSYV*LSKLSF
Trigger: AAAGCTAAGTTTTGAGAGGCAAACATAAGAGTGGGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGCAACAGAAGTTCAGTaGTATTGCAAAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILATEVQ*YCKEDR
Trigger: TCTGTCCTCTTTGCAATACCACTGAACTTCTGTTGC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAGAGACTACAGACAGTaGTTTGACACTCAGTGCATG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYRDYRQ*FDTQCM
Trigger: CATGCACTGAGTGTCAAACCACTGTCTGTAGTCTCT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTGGCTTTACCATCTTaGGCTGCTTTGGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLALPS*AALVYH
Trigger: ATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATACAAGGTCAGTGGTTaGCTTTACCATCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLYKVSG*LYHLGL
Trigger: CAGCCCAAGATGGTAAAGCCAACCACTGACCTTGTA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAAGATACAAGGTCAGTaGTTGGCTTTACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENKIQGQ*LALPSW
Trigger: CCAAGATGGTAAAGCCAACCACTGACCTTGTATCTT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTTGTGACTGTACTTTaGAGCTTGGAATATCAGGTT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLVTVL*SLEYQV
Trigger: AACCTGATATTCCAAGCTCCAAAGTACAGTCACAAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGGCTTTAGAATCAAATaGGCTGACTTTTTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILGFRIK*ADFFPC
Trigger: ACAGGGGAAAAAGTCAGCCCATTTGATTCTAAAGCC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGAGCTTGTTCAGCTTTaGGCTCTAATTTTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILELVQL*ALIFQL
Trigger: CAGCTGAAAAATTAGAGCCCAAAGCTGAACAAGCTC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAGGTTGATTCTGGTTTaGGCGATTTCTCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENRLILV*AISPVL
Trigger: CAAAACTGGAGAAATCGCCCAAACCAGAATCAACCT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACCTGATATTGCTCTCTaGGTTTGGCAATTTAAACAA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGPDIAL*VWQFKQ
Trigger: TTGTTTAAATTGCCAAACCCAGAGAGCAATATCAGG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAGGTCCACTATCTCATaGCTTTCTGGGATGATAAAA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVRSTIS*LSGMIK
Trigger: TTTTATCATCCCAGAAAGCCATGAGATAGTGGACCT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAGTTATCATGTCCACTaGCTCTGTATAAACTGTGGT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGSYHVH*LCINCG
Trigger: ACCACAGTTTATACAGAGCCAGTGGACATGATAACT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAACAGTGTCAGCAACTaGCCCTTCAGGTTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLNSVSN*PFRFRY
Trigger: GTACCTAAACCTGAAGGGCCAGTTGCTGACACTGTT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAATTTGTGTCAGACATaGAAGGCTTCATTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENNLCQT*KASFPQ
Trigger: TTGGGGGAATGAAGCCTTCCATGTCTGACACAAATT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTCTGTAGTGGTTTGTaGAGAAGCAGTTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLCSGL*RSSSRR
Trigger: CCTTCTGGAACTGCTTCTCCACAAACCACTACAGAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACCATCCTTGGCTTTGTaGTATTTCAATTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILPSLAL*YFNCHN
Trigger: GTTGTGGCAATTGAAATACCACAAAGCCAAGGATGG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATGCAGTACTTTCTGTaGACTTATATCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVMQYFL*TYIIRE
Trigger: CTCCCTGATGATATAAGTCCACAGAAAGTACTGCAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAACTTTAGCCATATCTaGATGCAGTACTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVNFSHI*MQYFLW
Trigger: CCACAGAAAGTACTGCATCCAGATATGGCTAAAGTT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTCAGGAGGTGGATTTaGCAGAGTTCTTTTAACTTT +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLRRWI*QSSFNF
Trigger: AAAGTTAAAAGAACTCTGCCAAATCCACCTCCTGAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATGTGGTGGTATAAACTaGCTGAATTCAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILCGGIN*LNSVWG
Trigger: TCCCCAAACTGAATTCAGCCAGTTTATACCACCACA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATGTTTGGGTTTGTGGTaGTATAAACTGGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGCLGLW*YKLAEF
Trigger: GAATTCAGCCAGTTTATACCACCACAAACCCAAACA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTCTGTTTGGGTTTGTaGTGGTATAAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVFCLGL*WYKLAE
Trigger: TTCAGCCAGTTTATACCACCACAAACCCAAACAGAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGCAGAGCTGAGCGTATaGTATTTCCTAATGTGCCCA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLAELSV*YFLMCP
Trigger: TGGGCACATTAGGAAATACCATACGCTCAGCTCTGC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACCCCAGGAAGAATCTTaGCAATATAGGCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILPQEES*QYRLQF
Trigger: AAATTGGAGCCTATATTGCCAAGATTCTTCCTGGGG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGAGAGGATACCACCTTaGAGTGTTATCGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLERIPP*SVIEVR
Trigger: TCTCACCTCGATAACACTCCAAGGTGGTATCCTCTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTACCAGGACTACTATaGGATTTCTCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLPGLL*DFSMVG
Trigger: TCCCACCATTGAGAAATCCCATAGTAGTCCTGGTAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATTTGCGTCTTTTACTTaGTTGAATGCGGAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGFASFT*LNAELL
Trigger: CAACAACTCCGCATTCAACCAAGTAAAAGACGCAAA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCAATTCTTCTTCCTCTaGAGAATCTTCAATAGTAGG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVQFFFL*RIFNSR
Trigger: CCTACTATTGAAGATTCTTCAGAGGAAGAAGAATTG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAAGTCCAGATGGAATTaGAGATGGCTTAGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLKSRWN*RWLRRN
Trigger: GTTCCTCCTAAGCCATCTTCAATTCCATCTGGACTT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGAGAAACTGTGTAACTaGTGTGGGAGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLEKLCN*CGSCLK
Trigger: TTTCAAGCAGCTCCCACATCAGTTACACAGTTTCTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGACTTTTTCTGAACCATaGTCTTTTCTTGTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVTFSEP*SFLVLG
Trigger: TCCGAGAACAAGAAAAGATCATGGTTCAGAAAAAGT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAGAAGTCATATAGCTTaGATAATCAGGTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVRSHIA*IIRFKV
Trigger: GACCTTGAACCTGATTATTCAAGCTATATGACTTCT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAATGCCACCAATAGATaGAGTGCTAGAAGTCATATA +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGNATNR*SARSHI
Trigger: TATATGACTTCTAGCACTTCATCTATTGGTGGCATT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGAAGGAAGTCGTTGGATaGAAATCTATCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVKEVVG*KSIIIP
Trigger: TGGGATTATGATAGATTTTCATCCAACGACTTCCTT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGCATACCTATGGATATaGGTGGCTGCAAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLAYLWI*VAAKED
Trigger: ATCCTCTTTTGCAGCCACTCATATCCATAGGTATGC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAATTAAGCTGCCATGCTaGGGAATTTATTTGCGTCTT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILIKLPC*GIYLRL
Trigger: AAGACGCAAATAAATTCCTCAGCATGGCAGCTTAAT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGAAGTTCAGTGGTATTaGAAAGAGGACAGATGGTTT +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENEVQWY*KEDRWF
Trigger: AAACCATCTGTCCTCTTTGCAATACCACTGAACTTC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTTTTTAGGCTCAGGTaGCTTGGAGAGATCCTGTTT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLFRLR*LGEILF
Trigger: AAACAGGATCTCTCCAAGGCACCTGAGCCTAAAAAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTTGTTTTTGACCTTTaGTCTCTGAACTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLVFDL*SLNWDQ
Trigger: CTGGTCCCAGTTCAGAGAGCAAAGGTCAAAAACAAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATCAGCAAGTGTACTTaGTTGAGCTTCCAAAATAGA +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVISKCT*LSFQNR
Trigger: TCTATTTTGGAAGCTCAAGCAAGTACACTTGCTGAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTCGTCTGTGTTTCCCTaGTGTTATTTTGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYSSVFP*CYFAFS
Trigger: GGAAAAGGCAAAATAACAGCAGGGAAACACAGACGA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCTTCATCAATGCTTGTaGTACTTTTTCGAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLHQCL*YFFESV
Trigger: GACTGACTCGAAAAAGTAGCACAAGCATTGATGAAG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGATCCAGGTGTTAATTaGATCTGTTGCCTCTTCATA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILDPGVN*ICCLFI
Trigger: TATGAAGAGGCAACAGATGCAATTAACACCTGGATC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATCATTTGCTGTGATCTaGCTTTTCACATCCATTGTA +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGSFAVI*LFTSIV
Trigger: TACAATGGATGTGAAAAGGCAGATCACAGCAAATGA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATCCATAGTAATAGTTTaGAAACTGGCACTGATATCA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGSIVIV*KLALIS
Trigger: TGATATCAGTGCCAGTTTGCAAACTATTACTATGGA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTCCAAGTCTAGCTGCTaGTGTTGTTTATCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENSKSSC*CCLSSS
Trigger: TGAAGAAGATAAACAACAGCAGCAGCTAGACTTGGA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCTTCCAAAATTGCCTaGTCTGTAGTGGTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPSKIA*SVVVCG
Trigger: TCCACAAACCACTACAGAGCAGGCAATTTTGGAAGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGCTACCGTTTGAACTaGTATGCTGGAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCYRLN*YAGDFG
Trigger: TCCAAAGTCTCCAGCATAGCAGTTCAAACGGTAGCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCATTGTGTTGGTTCTaGAGATCCTTCTCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPLCWF*RSFSWK
Trigger: TTTCCAGGAGAAGGATCTGCAGAACCAACACAATGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATTTCTTTCGAAGTTTTaGAGACTCCCTTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILFLSKF*RLPFHK
Trigger: CTTGTGGAAAGGGAGTCTGCAAAACTTCGAAAGAAA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTTCTTGGTCGCTCAATaGCATGCTGACTTTCTATTC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYFLVAQ*HADFLF
Trigger: GAATAGAAAGTCAGCATGGCATTGAGCGACCAAGAA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGTTATTTTTATCCTTaGGTGAGGAAAGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGCYFYP*VRKDVV
Trigger: CACTACATCTTTCCTCACGCAAGGATAAAAATAACA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCAACCAAGGCTCCTTTaGATAAAGAATTACCTTTGT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVQPRLL*IKNYLC
Trigger: ACAAAGGTAATTCTTTATGCAAAGGAGCCTTGGTTG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCACACAACATTGCTTTaGTTCCAAACATCACAGACA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENHTTLL*FQTSQT
Trigger: TGTCTGTGATGTTTGGAAGCAAAGCAATGTTGTGTG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAAGGACACACAACATTaGTTTGCTTCCAAACATCAC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENKDTQH*FASKHH
Trigger: GTGATGTTTGGAAGCAAAGCAATGTTGTGTGTCCTT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAAGTTGACTGTTGGTTaGATTATCTTCTGCCTAGAC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENKLTVG*IIFCLD
Trigger: GTCTAGGCAGAAGATAATGCAACCAACAGTCAACTT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAGGTTTTCCAGGAGTTaGTTGCTGAATAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYRFSRS*LLNRWF
Trigger: AAACCACCTATTCAGCAACCAACTCCTGGAAAACCT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAACTCTGTGAGGGTTTaGCAGAGTCTGTTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYNSVRV*QSLFLE
Trigger: CTCTAAAAACAGACTCTGCCAAACCCTCACAGAGTT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACCTGATATTGCTCTCTaGGTTTGGCAATTTAAACAA +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGPDIAL*VWQFKQ
Trigger: TTGTTTAAATTGCCAAACCCAGAGAGCAATATCAGG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTCACTAATTTTACTTaGGGAGGCACTGCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENFTNFT*GGTAVF
Trigger: GAAAACAGCAGTGCCTCCCCAAGTAAAATTAGTGAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTCCATTTCCAATTCTaGCTCTTCGTCAAAATACAA +
Preference number: 4 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGFHFQF*LFVKIQ
Trigger: TTGTATTTTGACGAAGAGCCAGAATTGGAAATGGAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTCGTTCATTTGCAGCTaGAAAAGCTTTGTATTTGTG +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVSFICS*KSFVFV
Trigger: CACAAATACAAAGCTTTTCCAGCTGCAAATGAACGA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCTTATGGTTCCAACTaGTTCAGTTTGCACAGATAT +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSYGSN*FSLHRY
Trigger: ATATCTGTGCAAACTGAACCAGTTGGAACCATAAGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTTTCTTGTCTTTGGGTaGAGATGTGGCACTCAGATA +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYFLVFG*RCGTQI
Trigger: TATCTGAGTGCCACATCTCCACCCAAAGACAAGAAA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAAACTTTAGCCATATCTaGATGCAGTACTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILNFSHI*MQYFLW
Trigger: CCACAGAAAGTACTGCATCCAGATATGGCTAAAGTT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATACTTTCTATTCGGGTTaGTCTTGTGCTACTCACTTC +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYTFYSG*SCATHF
Trigger: GAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAATTCTGGGCCACAATTaGTATTCTTCCTCTACTTTG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILILGHN*YSSSTL
Trigger: CAAAGTAGAGGAAGAATACCAATTGTGGCCCAGAAT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATCTGACATGGCATGTTaGAAGTCATCCATGATGAAT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILSDMAC*KSSMMN
Trigger: ATTCATCATGGATGACTTCCAACATGCCATGTCAGA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCCCCAGGAAGAATCTTaGCAATATAGGCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYPQEES*QYRLQF
Trigger: AAATTGGAGCCTATATTGCCAAGATTCTTCCTGGGG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAATCCACAGCTTTTGGTaGCTCATGAAGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLIHSFW*LMKFQM
Trigger: CATCTGGAACTTCATGAGCCACCAAAAGCTGTGGAT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTACCAGGACTACTATaGGATTTCTCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLPGLL*DFSMVG
Trigger: TCCCACCATTGAGAAATCCCATAGTAGTCCTGGTAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAATTGGGAGGCTTTGTTaGTTGAATGCGGAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLIGRLC*LNAELL
Trigger: CAACAACTCCGCATTCAACCAACAAAGCCTCCCAAT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGATGAAGAAAGCTAACTaGTCATACAAACTCTCATGC +
Preference number: 4 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVMKKAN*SYKLSC
Trigger: GCATGAGAGTTTGTATGACCAGTTAGCTTTCTTCAT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTTTTGGTATAAGTCCTaGAAAACTGGCAGCCACTTG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYFWYKS*KTGSHL
Trigger: CAAGTGGCTGCCAGTTTTCCAGGACTTATACCAAAA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
3UTR CAA 72 bp ATGCTTCCTAGAACATATCAGTTTACTCTAGGTCCTTaGGTACATAGACTGAAGATGTCTTGGCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: MLPRTYQFTLGP*VHRLKMSWLNG
Trigger: ACCATTAAGCCAAGACATCTTCAGTCTATGTACCAAAGGACCTAGAGTAAACTGATATGTTCTAGGAAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGATTGCTTTGGAGGATaGCTACTATCCAACTCTTGT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLDCFGG*LLSNSC
Trigger: ACAAGAGTTGGATAGTAGTCATCCTCCAAAGCAATC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTGTTGAGAAGATATTaGTTTGGGAGTGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLLRRY*FGSAIL
Trigger: CAGGATGGCACTCCCAAATCAATATCTTCTCAACAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTTACCTCCGTTAAATaGGGATTGGGATTAAAACCA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENFTSVK*GLGLKP
Trigger: TGGTTTTAATCCCAATCCTCATTTAACGGAGGTAAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACCATCTTCTTTATACTaGGGCTTCTCTAAATGTATG +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILPSSLY*GFSKCM
Trigger: CATACATTTAGAGAAGCCTCAGTATAAAGAAGATGG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGAGACGGTCTGTTTTTaGCAGATCCTTTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLETVCF*QILFMK
Trigger: CTTCATGAAAAGGATCTGTCAAAAACAGACCGTCTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAAATCTGATAGCATATTaGGGTCCAGTCTTACACATA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILNLIAY*GPVLHI
Trigger: TATGTGTAAGACTGGACCTCAATATGCTATCAGATT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAAGGAAGTCGTTGGATaGAAATCTATCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENKEVVG*KSIIIP
Trigger: TGGGATTATGATAGATTTTCATCCAACGACTTCCTT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCAAGGTTCTAGAAGTTaGCTGTTGGTTGCATTATCT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYQGSRS*LLVALS
Trigger: AGATAATGCAACCAACAGTCAACTTCTAGAACCTTG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTGAAGTGGCAATTTTaGATGGTCTGTCTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLKWQF*MVCLRS
Trigger: ACTCCTCAGACAGACCATGCAAAATTGCCACTTCAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTTTACCATCTTGGGCTaGTTTGGTTTATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYFTILG*FGLSSA
Trigger: TGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAATCAGCAAGTGTACTTaGTTGAGCTTCCAAAATAGA +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILISKCT*LSFQNR
Trigger: TCTATTTTGGAAGCTCAAGCAAGTACACTTGCTGAT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCTGCATAATAGATTaGTCATCTGTTGGTGAGTAT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVFCIID*SSVGEY
Trigger: ATACTCACCAACAGATGAGCAATCTATTATGCAGAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCAGACATAGAACGCTaGATCATCTTGGCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSDIER*IILAVL
Trigger: TAAGACAGCCAAGATGATGCAGCGTTCTATGTCTGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGAATTACCTTTGTGCTaGATGAAAACCACATTAATC +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVELPLC*MKTTLI
Trigger: GATTAATGTGGTTTTCATGCAGCACAAAGGTAATTC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGTTTTAAGCTCAGAATaGTCTGAGAAGCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVVLSSE*SEKQFD
Trigger: ATCAAATTGCTTCTCAGAGCATTCTGAGCTTAAAAC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATCAGTGAGGTTGCATTaGCTTATCACATATGCTTAT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILSVRLH*LITYAY
Trigger: ATAAGCATATGTGATAAGGCAATGCAACCTCACTGA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAATTAGGTTAGTAGCATaGATTCCATTCTGCAATATG +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGIRLVA*IPFCNM
Trigger: CATATTGCAGAATGGAATGCATGCTACTAACCTAAT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGCATCTCGTTGAAGTaGCAATTTTGCATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCISLK*QFCMVC
Trigger: ACAGACCATGCAAAATTGCCACTTCAACGAGATGCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAAGATACAAGGTCAGTaGTTGGCTTTACCATCTTGG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLKIQGQ*LALPSW
Trigger: CCAAGATGGTAAAGCCAACCACTGACCTTGTATCTT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACAGGTTGGCCTGCAGTaGAAATTAAATTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLQVGLQ*KLNLMP
Trigger: AGGCATCAAATTTAATTTCCACTGCAGGCCAACCTG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGAACAAGAAGATCTATaGAGCTCCTCCATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLEQEDL*SSSISA
Trigger: TGCAGAAATGGAGGAGCTCCATAGATCTTCTTGTTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTCGTTCATTTGCAGCTaGAAAAGCTTTGTATTTGTG +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENSFICS*KSFVFV
Trigger: CACAAATACAAAGCTTTTCCAGCTGCAAATGAACGA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGTCAAAGAGGCATCTaGCATTCTGTCAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCQRGI*HSVKVH
Trigger: ATGGACTTTGACAGAATGCCAGATGCCTCTTTGACA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATACACTTATTTCTTCTaGATAGTCTATAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGYTYFF*IVYNAA
Trigger: GGCAGCATTATAGACTATCCAGAAGAAATAAGTGTA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAATCTGTTGGAGTCCCTaGTTCAGATGGCAATGTAAT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLICWSP*FRWQCN
Trigger: ATTACATTGCCATCTGAACCAGGGACTCCAACAGAT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTTGATGTTGTAAGTTaGAGTGGTGTTGTCATTGCA +
Preference number: 4 (lower is better)
Translates to: TCPTHLIHLTTMETRVENFDVVS*SGVVIA
Trigger: TGCAATGACAACACCACTCCAACTTACAACATCAAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGTGGTGGTATAAACTaGCTGAATTCAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCGGIN*LNSVWG
Trigger: TCCCCAAACTGAATTCAGCCAGTTTATACCACCACA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAATAAAGTATGGCTGCTaGCAGTTGTTTTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLIKYGC*QLFCCL
Trigger: CAAGCAGCAAAACAACTGCCAGCAGCCATACTTTAT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGCTTTTGATAAAGTATaGCTGCTGGCAGTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYAFDKV*LLAVVL
Trigger: CAAAACAACTGCCAGCAGCCATACTTTATCAAAAGC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACCCCAAGGAAGTCGTTaGATGAAAATCTATCATAAT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILPQGSR*MKIYHN
Trigger: ATTATGATAGATTTTCATCCAACGACTTCCTTGGGG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAAACAAAGCCATTCTTaGATCTCAGTCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYKQSHS*ISVKCG
Trigger: ACCACATTTGACTGAGATTCAAGAATGGCTTTGTTT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTCTCTTCTTGTTTTTaGTCTGTGGTTACCATAGGA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLSSCF*SVVTIG
Trigger: TCCTATGGTAACCACAGATCAAAAACAAGAAGAGAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGATGATAAAAGAGCTTaGAACAATATCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYDDKRA*NNIFLR
Trigger: CCTCAGGAAGATATTGTTTCAAGCTCTTTTATCATC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTGTTGTTATAAAATATaGTCTAGGCATTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYCCYKI*SRHWLA
Trigger: AGCCAGCCAATGCCTAGATCATATTTTATAACAACA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTACCTGAAACTGTGTaGTCCTTTGAGTCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLPETV*SFESLV
Trigger: AACAAGAGACTCAAAGGATCACACAGTTTCAGGTAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGCAGTTTCTATACCCTaGGAAGACATGTTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLAVSIP*EDMFLQ
Trigger: TTGAAGAAACATGTCTTCTCAGGGTATAGAAACTGC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAGGACTTTCATCAAATaGTTCATCGTCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYRTFIK*FIVFIM
Trigger: CATGATGAAGACGATGAAGCATTTGATGAAAGTCCT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATTCTGCATAATAGATTaGTCATCTGTTGGTGAGTAT +
Preference number: 4 (lower is better)
Translates to: GISPGKLAATCAYNFCILFCIID*SSVGEY
Trigger: ATACTCACCAACAGATGAGCAATCTATTATGCAGAA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTGCACAGATATCTCTaGTACCGTTTGAACTGCTAT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLHRYL*YRLNCY
Trigger: ATAGCAGTTCAAACGGTAGCAGAGATATCTGTGCAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGGTTGCATTATCTTCTaGCTAGACTTTTTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYGCIIF*LDFLSV
Trigger: AACACTCAAAAAGTCTAGGCAGAAGATAATGCAACC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTTTCCAGATCCTGTTTaGCTTACTGGTTTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYFPDPV*LTGFVD
Trigger: ATCTACAAAACCAGTAAGCCAAACAGGATCTGGAAA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTTTTTAACGCCTTTTaGCTACCTTCTTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLFNAF*LPSFCI
Trigger: TATGCAGAAAGAAGGTAGCCAAAAGGCGTTAAAAAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGTTGTAAGTTGGAGTaGTGTTGTCATTGCATGTTC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCCKLE*CCHCMF
Trigger: GAACATGCAATGACAACACCACTCCAACTTACAACA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTCAGGAGGTGGATTTaGCAGAGTTCTTTTAACTTT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLRRWI*QSSFNF
Trigger: AAAGTTAAAAGAACTCTGCCAAATCCACCTCCTGAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAATTCTGGGCCACAATTaGTATTCTTCCTCTACTTTG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLILGHN*YSSSTL
Trigger: CAAAGTAGAGGAAGAATACCAATTGTGGCCCAGAAT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCTGACATGGCATGTTaGAAGTCATCCATGATGAAT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSDMAC*KSSMMN
Trigger: ATTCATCATGGATGACTTCCAACATGCCATGTCAGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAAGGAAATAACAATATaGTCAGCACTAGCTCTACCA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLKEITI*SALALP
Trigger: TGGTAGAGCTAGTGCTGATCATATTGTTATTTCCTT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAATCTGATAGCATATTaGGGTCCAGTCTTACACATA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLNLIAY*GPVLHI
Trigger: TATGTGTAAGACTGGACCTCAATATGCTATCAGATT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTTCTTCCCCAATTATaGGTGATGATTATAGGCTTC +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLFLPQL*VMIIGF
Trigger: GAAGCCTATAATCATCACTCATAATTGGGGAAGAAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR TCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAATTGTGGGAAAAACTaGGATGCTCTTCAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLNCGKN*DALQGK
Trigger: TTTACCTTGAAGAGCATCTCAGTTTTTCCCACAATT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAGGACTTTCATCAAATaGTTCATCGTCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLRTFIK*FIVFIM
Trigger: CATGATGAAGACGATGAAGCATTTGATGAAAGTCCT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTCCATAGTAATAGTTTaGAAACTGGCACTGATATCA +
Preference number: 4 (lower is better)
Translates to: IVLLSEVALPYHICLYIYSIVIV*KLALIS
Trigger: TGATATCAGTGCCAGTTTGCAAACTATTACTATGGA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTGTACTTTGGAGCTTaGAATATCAGGTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLYFGA*NIRFCC
Trigger: ACAACAAAACCTGATATTCCAAGCTCCAAAGTACAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGGTTTGTGCTTTCTTaGGTTCTTCCTTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLWFVLS*VLPSFV
Trigger: TACAAAAGAAGGAAGAACCCAAGAAAGCACAAACCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCCCAAGGAAGTCGTTaGATGAAAATCTATCATAAT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPQGSR*MKIYHN
Trigger: ATTATGATAGATTTTCATCCAACGACTTCCTTGGGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333891.14
3UTR CAA 72 bp AAATGTGCTTTTACCACATGGATTCCAAAGTCAGTGTaGTATATGCTTGTAACATTTAGACACAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KCAFTTWIPKSV*YMLVTFRHREN
Trigger: GTTTTCTCTGTGTCTAAATGTTACAAGCATATACAACACTGACTTTGGAATCCATGTGGTAAAAGCACATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGTTAATTGCATCTGTTaGCTCTTCATAAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLVNCIC*LFISSS
Trigger: TGAAGAACTTATGAAGAGGCAACAGATGCAATTAAC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR GCA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTCTTCATCAAGCTCTaGTTGTTTCTTTCGAAGTTT +
Preference number: 4 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLFFIKL*LFLSKF
Trigger: AAACTTCGAAAGAAACAAGCAGAGCTTGATGAAGAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS GCA 90 bp CCGCTGCCGGTGCCTCCTCCATGTTGGACAGCGCCAGGCAACCTTTaGAGAAGACACCTCCCGGACGCCGCCTCGGCGCCCCGAGCCGGG +
Preference number: 5 (lower is better)
Translates to: PLPVPPPCWTAPGNL*RRHLPDAASAPRAG
Trigger: CCCGGCTCGGGGCGCCGAGGCGGCGTCCGGGAGGTGTCTTCTGCAAAGGTTGCCTGGCGCTGTCCAACATGGAGGAGGCACCGGCAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp CGGAACGCCAGGCAGGGGTTAGTCCCGCTCGCAGGTAACGCCCGCTaGCGGTGCCTCCTCCATGTTGGACAGCGCCAGGCAACCTTTGCA +
Preference number: 5 (lower is better)
Translates to: RNARQGLVPLAGNAR*RCLLHVGQRQATFA
Trigger: TGCAAAGGTTGCCTGGCGCTGTCCAACATGGAGGAGGCACCGGCAGCGGGCGTTACCTGCGAGCGGGACTAACCCCTGCCTGGCGTTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp GCCAGGCAGGGGTTAGTCCCGCTCGCAGGTAACGCCCGCTGCCGGTaGCTCCTCCATGTTGGACAGCGCCAGGCAACCTTTGCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: ARQGLVPLAGNARCR*LLHVGQRQATFAED
Trigger: GTCTTCTGCAAAGGTTGCCTGGCGCTGTCCAACATGGAGGAGGCACCGGCAGCGGGCGTTACCTGCGAGCGGGACTAACCCCTGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp TGCTGCTGCTTCCTTCACTGTCCACGCTATACCCACTGCCAAAGCTaGTGCCCGAGGAGCCGGTGGACACAGAGCTTTCTGCAGGCCGGT +
Preference number: 5 (lower is better)
Translates to: CCCFLHCPRYTHCQS*CPRSRWTQSFLQAG
Trigger: ACCGGCCTGCAGAAAGCTCTGTGTCCACCGGCTCCTCGGGCAGCAGCTTTGGCAGTGGGTATAGCGTGGACAGTGAAGGAAGCAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000432078.2
CDS CCA 90 bp GGCCTTGTCCTGCTCAGATGGGACAGAAGGTTCTTTGGGAGGGGCTaGCTTGGACAAAGAATCTGCCTCAGGGGGCTGCTTGGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: GLVLLRWDRRFFGRG*LGQRICLRGLLGLG
Trigger: GCCAAGGCCAAGCAGCCCCCTGAGGCAGATTCTTTGTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp GCGGAGTTGTTGCACGGCAGCTTCGGCAGCAGCTATGGCAGCCCCTaGATCTTCCAGGTGGGTCTGAGTGACGCTGGTTTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: AELLHGSFGSSYGSP*IFQVGLSDAGFALT
Trigger: AGTCAAAGCAAAACCAGCGTCACTCAGACCCACCTGGAAGATGCAGGGGCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS TCA 90 bp CGGCAGCAGCTATGGCAGCCCCTGCATCTTCCAGGTGGGTCTGAGTaGCGCTGGTTTTGCTTTGACTGCGAGATGGTCCATGAGAACGGA +
Preference number: 5 (lower is better)
Translates to: RQQLWQPLHLPGGSE*RWFCFDCEMVHENG
Trigger: TCCGTTCTCATGGACCATCTCGCAGTCAAAGCAAAACCAGCGTCACTCAGACCCACCTGGAAGATGCAGGGGCTGCCATAGCTGCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CCA 90 bp CTTAGCAGGACCAAGAGGCTGAGCTGGAGGCTTTGTTGTCCCTGGTaGCTGGACTGGGGGTTTCACTGTCCCTGGTTGTTGAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: LSRTKRLSWRLCCPW*LDWGFHCPWLLSQW
Trigger: CCATTGGCTCAACAACCAGGGACAGTGAAACCCCCAGTCCAGCCACCAGGGACAACAAAGCCTCCAGCTCAGCCTCTTGGTCCTGCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp AGGCTTAGCAGGACCAAGAGGCTGAGCTGGAGGCTTTGTTGTCCCTaGTGGCTGGACTGGGGGTTTCACTGTCCCTGGTTGTTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: RLSRTKRLSWRLCCP*WLDWGFHCPWLLSQ
Trigger: TTGGCTCAACAACCAGGGACAGTGAAACCCCCAGTCCAGCCACCAGGGACAACAAAGCCTCCAGCTCAGCCTCTTGGTCCTGCTAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp TGTCCTGCTCAGATGGGACAGAAGGTTCTTTGGGAGGGGCTGGCTTaGACAAAGAATCTGCCTCAGGGGGCTGCTTGGCCTTGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: CPAQMGQKVLWEGLA*TKNLPQGAAWPWLK
Trigger: CTTCAGCCAAGGCCAAGCAGCCCCCTGAGGCAGATTCTTTGTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCCCATCTGAGCAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGCCTCAGGGGGCTGCTaGGCCTTGGCTGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPASGGC*ALAEGE
Trigger: CTCTCCTTCAGCCAAGGCCAAGCAGCCCCCTGAGGC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACAGGTGTGGGGACAGTTaGGCCAGCGGTAGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHRCGDS*ASGRSW
Trigger: CCACGACCTACCGCTGGCCAAACTGTCCCCACACCT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CCATCGGTAGGCTTGCTGCTGCCGTGCTTCTTTTTGCTCACTGAGGGGGACCCTGTTCCATCGGTAGGCTaGCTGCTGCCGTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: PSVGLLLPCFFLLTEGDPVPSVG*LLPCFF
Trigger: AAAGAAGCACGGCAGCAGCAAGCCTACCGATGGAAC...AGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCAGCAGCAAGCCTACCGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS TCA 90 bp GCTGGACGCCCAGGGTCCGGGGGTCTTCCTGATTGCTTTGGAGGATaGCTACTATCCAACTCTTGTTTCCTGTGCATGGAAGGCGACTCC +
Preference number: 5 (lower is better)
Translates to: AGRPGSGGLPDCFGG*LLSNSCFLCMEGDS
Trigger: GGAGTCGCCTTCCATGCACAGGAAACAAGAGTTGGATAGTAGTCATCCTCCAAAGCAATCAGGAAGACCCCCGGACCCTGGGCGTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp GGGCTGGCTTGGACAAAGAATCTGCCTCAGGGGGCTGCTTGGCCTTaGCTGAAGGAGAGCCATGAAGGGTTGGTTGTTTCACTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: GLAWTKNLPQGAAWP*LKESHEGLVVSLVV
Trigger: CACCACTAGTGAAACAACCAACCCTTCATGGCTCTCCTTCAGCCAAGGCCAAGCAGCCCCCTGAGGCAGATTCTTTGTCCAAGCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp TGGGAGGGGCTGGCTTGGACAAAGAATCTGCCTCAGGGGGCTGCTTaGCCTTGGCTGAAGGAGAGCCATGAAGGGTTGGTTGTTTCACTA +
Preference number: 5 (lower is better)
Translates to: WEGLAWTKNLPQGAA*PWLKESHEGLVVSL
Trigger: TAGTGAAACAACCAACCCTTCATGGCTCTCCTTCAGCCAAGGCCAAGCAGCCCCCTGAGGCAGATTCTTTGTCCAAGCCAGCCCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp CAAGCCCATAGACAGAGGAAGGTCTGGAGGAAGGTCTGGACCTGCTaGCACTACTGTATGGCTTATCCGCTTCATCCTGCAGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: QAHRQRKVWRKVWTC*HYCMAYPLHPAELS
Trigger: GCTCAGCTCTGCAGGATGAAGCGGATAAGCCATACAGTAGTGGCAGCAGGTCCAGACCTTCCTCCAGACCTTCCTCTGTCTATGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp CTCACTGCTGATGTAGTGGTAACAGGTGCAGTCTTCAGTTTGGGCTaGGGTGATGACGGAACTGGAGCCAGATCCCCGCCTAGAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LTADVVVTGAVFSLG*GDDGTGARSPPRAL
Trigger: AAGAGCTCTAGGCGGGGATCTGGCTCCAGTTCCGTCATCACCCCAGCCCAAACTGAAGACTGCACCTGTTACCACTACATCAGCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp CTGGTGAAAGTGGTGAGATGGGTGAGTAAAGGACTTTGGGGGATTTaGGTGGGGAAGGAGCCAGCTGTACTGTGGAATCTGCCCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LVKVVRWVSKGLWGI*VGKEPAVLWNLPGG
Trigger: ACCTCCGGGCAGATTCCACAGTACAGCTGGCTCCTTCCCCACCCAAATCCCCCAAAGTCCTTTACTCACCCATCTCACCACTTTCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp GTTGCTGAACTTCAGGCAATGAGTGGCTTGATCCAAACTGATCCCTaGTGTCTGCAGATATTGGTGGCAGGGGTCCAGCTGCAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VAELQAMSGLIQTDP*CLQILVAGVQLQPW
Trigger: CCAGGGCTGCAGCTGGACCCCTGCCACCAATATCTGCAGACACCAGGGATCAGTTTGGATCAAGCCACTCATTGCCTGAAGTTCAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACAGGTGCTGGTGGTGCTaGACCTGTGGATTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHRCWWC*TCGFGW
Trigger: CCACCCAAATCCACAGGTCAAGCACCACCAGCACCT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCGTGTCGCTCAGACCTaGGGGGCTTTTAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTRVAQT*GAFRLL
Trigger: CAGCAGCCTAAAAGCCCCCAAGGTCTGAGCGACACG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTATCCACAGCTCTGCCGTGCTTCTTTTaGCTCACTGAGGGGGACCCT +
Preference number: 5 (lower is better)
Translates to: SAANCLGSTPGDFALSTALPCFF*LTEGDP
Trigger: AGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCAG...AGCTGTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS TCA 90 bp ACTGAGACCAGGTTGAGCTGGACGCCCAGGGTCCGGGGGTCTTCCTaGTTGCTTTGGAGGATGACTACTATCCAACTCTTGTTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: TETRLSWTPRVRGSS*LLWRMTTIQLLFPV
Trigger: CACAGGAAACAAGAGTTGGATAGTAGTCATCCTCCAAAGCAATCAGGAAGACCCCCGGACCCTGGGCGTCCAGCTCAACCTGGTCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp GAATCTGCCTCAGGGGGCTGCTTGGCCTTGGCTGAAGGAGAGCCATaGAGGGTTGGTTGTTTCACTAGTGGTGGTGGCTTTTTAGGCTCA +
Preference number: 5 (lower is better)
Translates to: ESASGGCLALAEGEP*RVGCFTSGGGFLGS
Trigger: TGAGCCTAAAAAGCCACCACCACTAGTGAAACAACCAACCCTTCATGGCTCTCCTTCAGCCAAGGCCAAGCAGCCCCCTGAGGCAGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp GTCCAGCTGCAGCCCTGGCCATTCCCATTGGCTGGCCAACAGGACTaGGTGGGCTTTCTTCTTCAGAATTCTGGGCCACAATTGGTATTC +
Preference number: 5 (lower is better)
Translates to: VQLQPWPFPLAGQQD*VGFLLQNSGPQLVF
Trigger: GAATACCAATTGTGGCCCAGAATTCTGAAGAAGAAAGCCCACTCAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGGCTGCAGCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 90 bp ATCTTGGGCTGCTTTGGTTTATCATCAGCAACAGGGGCCTTGTCCTaGTCAGATGGGACAGAAGGTTCTTTGGGAGGGGCTGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: ILGCFGLSSATGALS*SDGTEGSLGGAGLD
Trigger: GTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGCGCCAGGCAACCTTaGCAGAAGACACCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASARQP*QKTPPG
Trigger: TCCGGGAGGTGTCTTCTGCAAAGGTTGCCTGGCGCT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTCCCCACCTGCTGGGTaGGAGGCTTTGCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFSPPAG*EALLAL
Trigger: CAGGGCCAGCAAAGCCTCCAACCCAGCAGGTGGGGA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGTGCAGTCTTCAGTTaGGGCTGGGGTGATGACGGA +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGAVFS*GWGDDG
Trigger: TCCGTCATCACCCCAGCCCAAACTGAAGACTGCACC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGCCTCAGGGGGCTGCTaGGCCTTGGCTGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAASGGC*ALAEGE
Trigger: CTCTCCTTCAGCCAAGGCCAAGCAGCCCCCTGAGGC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTCAGCAACAGGGGCCTaGTCCTGCTCAGATGGGACA +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPSATGA*SCSDGT
Trigger: TGTCCCATCTGAGCAGGACAAGGCCCCTGTTGCTGA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCTGGTTTGGGGGCGATaGGAGGTTTGCTTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTLVWGR*EVCLAQ
Trigger: CTGAGCCAAGCAAACCTCCAATCGCCCCCAAACCAG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS GCA 90 bp TCGTCTGCTGTTGGACTCAGAGGCTTGGGGTCAGACATAGAACGCTaGATCATCTTGGCTGTCTTAGGACTTGCTGGGGGAACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: SSAVGLRGLGSDIER*IILAVLGLAGGTLA
Trigger: GGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCCAAGATGATGCAGCGTTCTATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 90 bp GGTCTGGACCTGCTGCCACTACTGTATGGCTTATCCGCTTCATCCTaGAGAGCTGAGCGTATGGTATTTCCTAATGTGCCCAGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GLDLLPLLYGLSASS*RAERMVFPNVPSPV
Trigger: CACAGGACTGGGCACATTAGGAAATACCATACGCTCAGCTCTGCAGGATGAAGCGGATAAGCCATACAGTAGTGGCAGCAGGTCCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 90 bp AATCAAGCCCATAGACAGAGGAAGGTCTGGAGGAAGGTCTGGACCTaGTGCCACTACTGTATGGCTTATCCGCTTCATCCTGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: NQAHRQRKVWRKVWT*CHYCMAYPLHPAEL
Trigger: CAGCTCTGCAGGATGAAGCGGATAAGCCATACAGTAGTGGCAGCAGGTCCAGACCTTCCTCCAGACCTTCCTCTGTCTATGGGCTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp AGCTGCAGCCCTGGCCATTCCCATTGGCTGGCCAACAGGACTGAGTaGGCTTTCTTCTTCAGAATTCTGGGCCACAATTGGTATTCTTCC +
Preference number: 5 (lower is better)
Translates to: SCSPGHSHWLANRTE*AFFFRILGHNWYSS
Trigger: GGAAGAATACCAATTGTGGCCCAGAATTCTGAAGAAGAAAGCCCACTCAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGGCTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGGTGCCTCCTCCATGTaGGACAGCGCCAGGCAACCT +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERGASSM*DSARQP
Trigger: AGGTTGCCTGGCGCTGTCCAACATGGAGGAGGCACC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGGCTGTGGGGATGATTaGCTCACTGCTGATGTAGTG +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHGCGDD*LTADVV
Trigger: CACTACATCAGCAGTGAGCAAATCATCCCCACAGCC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAGGTGTGGGGACAGTTaGGCCAGCGGTAGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPARCGDS*ASGRSW
Trigger: CCACGACCTACCGCTGGCCAAACTGTCCCCACACCT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTAGGCTTTGGGGACTGTaGAGGTGTGGGGACAGTTTG +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPRLWGL*RCGDSL
Trigger: CAAACTGTCCCCACACCTCAACAGTCCCCAAAGCCT...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGTTGGACTCAGAGGCTaGGGGTCAGACATAGAACGC +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTVGLRG*GSDIER
Trigger: GCGTTCTATGTCTGACCCCAAGCCTCTGAGTCCAAC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS TCA 90 bp TCTGACCTGAAAGTGTCTGTAGTTCTACTTTTACTGAGACCAGGTTaGGCTGGACGCCCAGGGTCCGGGGGTCTTCCTGATTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: SDLKVSVVLLLLRPG*AGRPGSGGLPDCFG
Trigger: TCCAAAGCAATCAGGAAGACCCCCGGACCCTGGGCGTCCAGCTCAACCTGGTCTCAGTAAAAGTAGAACTACAGACACTTTCAGGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp CGTATAGCCCTCGGTATACTGAAAAGGAGCCCTGGAACTTTCGTCTaGTGTTGGACTCAGAGGCTTGGGGTCAGACATAGAACGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RIALGILKRSPGTFV*CWTQRLGVRHRTLH
Trigger: ATGCAGCGTTCTATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGTATACCGAGGGCTATACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 90 bp AGCTGCCATGCTGAGGAATTTATTTGCGTCTTTTACTTGGTTGAATaGGGAGTTGTTGCACGGCAGCTTCGGCAGCAGCTATGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SCHAEEFICVFYLVE*GVVARQLRQQLWQP
Trigger: GGGCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAAGACGCAAATAAATTCCTCAGCATGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CCA 90 bp CTGCTTTGGTTTATCATCAGCAACAGGGGCCTTGTCCTGCTCAGATaGGACAGAAGGTTCTTTGGGAGGGGCTGGCTTGGACAAAGAATC +
Preference number: 5 (lower is better)
Translates to: LLWFIISNRGLVLLR*DRRFFGRGWLGQRI
Trigger: GATTCTTTGTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp GCCCTCGGTATACTGAAAAGGAGCCCTGGAACTTTCGTCTGCTGTTaGACTCAGAGGCTTGGGGTCAGACATAGAACGCTGCATCATCTT +
Preference number: 5 (lower is better)
Translates to: ALGILKRSPGTFVCC*TQRLGVRHRTLHHL
Trigger: AAGATGATGCAGCGTTCTATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGTATACCGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGCTGAGCTAAAGCCTTaGGCCCAGGCTGCTCCGATG +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVAELKP*AQAAPM
Trigger: CATCGGAGCAGCCTGGGCCAAAGGCTTTAGCTCAGC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTGAAGGAGGCTTTGTaGGGCCAGTCTGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFVKEAL*GQSAGQ
Trigger: CTGCCCAGCAGACTGGCCCAACAAAGCCTCCTTCAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGGGACAGAAGGTTCTTaGGGAGGGGCTGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASGTEGS*GGAGLD
Trigger: GTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCCC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCCTTTTGGCATTGGCTaGGCATCTGGTTTAGGACTC +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHPFGIG*ASGLGL
Trigger: GAGTCCTAAACCAGATGCCAAGCCAATGCCAAAAGG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGGCATAGGAGATGCTTaGGGTCCTGATGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAGIGDA*GPDGAG
Trigger: ACCTGCACCATCAGGACCCAAAGCATCTCCTATGCC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGTGCCGAGCTTTGCGTaGCTGTTTGCTCTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPVPSFA*LFALSF
Trigger: AAAGGAGAGAGCAAACAGCAACGCAAAGCTCGGCAC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGGTCTGTGCCGAGCTTaGCGTTGCTGTTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAGLCRA*RCCLLS
Trigger: AGAGAGCAAACAGCAACGCAAAGCTCGGCACAGACC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCTTGGTGAAGACTTGTaGGAGTGTGGGGAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLGEDL*ECGESG
Trigger: CCCACTTTCCCCACACTCCAACAAGTCTTCACCAAG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGAGCTGTACTTCTGGTaGCTGAAACCTCAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHELYFW*LKPQSW
Trigger: CCAAGACTGAGGTTTCAGCAACCAGAAGTACAGCTC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCATCATGAACTGGGCTaGCCGCTCTTCTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPHHELG*PLFFLL
Trigger: CAGCAAGAAGAAGAGCGGCAAGCCCAGTTCATGATG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGATCTGCCGAATCTTTaGCTCCTCCAGCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSADLPNL*LLQLLV
Trigger: CACCAGCAGCTGGAGGAGCAAAAGATTCGGCAGATC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTTCAGTTGCCCAAAATaGACTGCCTTCCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHFSCPK*TAFQSS
Trigger: GCTGCTCTGGAAGGCAGTCAATTTTGGGCAACTGAA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGGGCGTTTCTTGTCTTaGGGTGGAGATGTGGCACTC +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAGRFLS*GGDVAL
Trigger: GAGTGCCACATCTCCACCCAAAGACAAGAAACGCCC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGGTGTTGGGCGTTTCTaGTCTTTGGGTGGAGATGTG +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTGVGRF*SLGGDV
Trigger: CACATCTCCACCCAAAGACAAGAAACGCCCAACACC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCATCTTGAAGGAGCCTaGCCCTGGAGGAAATGCCAC +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAHLEGA*PWRKCH
Trigger: GTGGCATTTCCTCCAGGGCAAGGCTCCTTCAAGATG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS TCA 90 bp TCATGTCCAGGCTGCTGTGCTGGAGGTTTTCCAGGAGTTGGTTGCTaGATAGGTGGTTTGGATGGGCTTGGCAGTGAGGGTTTAACTGAT +
Preference number: 5 (lower is better)
Translates to: SCPGCCAGGFPGVGC*IGGLDGLGSEGLTD
Trigger: ATCAGTTAAACCCTCACTGCCAAGCCCATCCAAACCACCTATTCAGCAACCAACTCCTGGAAAACCTCCAGCACAGCAGCCTGGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp GATGATACTGATGTAGGGGATGTACCAGGAGTGAAGCTGGAAGCATaGAGACTCGAAGATCCCTCTCCCCTTGACCTATCTTCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: DDTDVGDVPGVKLEA*RLEDPSPLDLSSGE
Trigger: CTCACCTGAAGATAGGTCAAGGGGAGAGGGATCTTCGAGTCTGCATGCTTCCAGCTTCACTCCTGGTACATCCCCTACATCAGTATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp TATGTCTGCCTGTTTAGTCTGAGGCCTGGATGCATCTCGTTGAAGTaGCAATTTTGCATGGTCTGTCTGAGGAGTCTGGGTAGGACCCTG +
Preference number: 5 (lower is better)
Translates to: YVCLFSLRPGCISLK*QFCMVCLRSLGRTL
Trigger: CAGGGTCCTACCCAGACTCCTCAGACAGACCATGCAAAATTGCCACTTCAACGAGATGCATCCAGGCCTCAGACTAAACAGGCAGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp GTACAAAGGCTGATTCTAAGGCTTTGCCTGGTGAAAGTGGTGAGATaGGTGAGTAAAGGACTTTGGGGGATTTGGGTGGGGAAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: VQRLILRLCLVKVVR*VSKGLWGIWVGKEP
Trigger: TGGCTCCTTCCCCACCCAAATCCCCCAAAGTCCTTTACTCACCCATCTCACCACTTTCACCAGGCAAAGCCTTAGAATCAGCCTTTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp ATGGTGGGAACCTGCATGTCCTTTGATGGGTCAGGGAAGATACCATaGCTTCTGCTTTTGATAACAGATGGCTTTGGGGACTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MVGTCMSFDGSGKIP*LLLLITDGFGDCWL
Trigger: CAGCCAGCAGTCCCCAAAGCCATCTGTTATCAAAAGCAGAAGCCATGGTATCTTCCCTGACCCATCAAAGGACATGCAGGTTCCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGGTGCCTCCTCCATGTaGGACAGCGCCAGGCAACCT +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGGASSM*DSARQP
Trigger: AGGTTGCCTGGCGCTGTCCAACATGGAGGAGGCACC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGCTTAGGAATCGGCTaGGGTGGCTGTTGTTGTAAA +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHCLGIG*GGCCCK
Trigger: TTTACAACAACAGCCACCCAAGCCGATTCCTAAGCA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGTTGTGAAGGAGGCTTaGTTGGGCCAGTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAVVKEA*LGQSAG
Trigger: CCCAGCAGACTGGCCCAACAAAGCCTCCTTCACAAC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAGGTGCTGGTGGTGCTaGACCTGTGGATTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPARCWWC*TCGFGW
Trigger: CCACCCAAATCCACAGGTCAAGCACCACCAGCACCT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTGCAGAGAGGACAGGTaGATTCTGGTTTGGGCGATT +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTCREDR*ILVWAI
Trigger: AATCGCCCAAACCAGAATCAACCTGTCCTCTCTGCA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCTTCTTGCACTGTCTTaGGAGCCACTCTGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLLALS*EPLCLQ
Trigger: TTGAAGGCAGAGTGGCTCCAAAGACAGTGCAAGAAG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCTGGTTTGGGGGCGATaGGAGGTTTGCTTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALVWGR*EVCLAQ
Trigger: CTGAGCCAAGCAAACCTCCAATCGCCCCCAAACCAG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTTGCCGCTCTTCTTCTaGCTGAAAGAGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHLPLFF*LKEKVL
Trigger: CAACACCTTCTCTTTCAGCAAGAAGAAGAGCGGCAA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCTGCTCTGTAGTGGTTaGTGGAGAAGCAGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTLLCSG*WRSSSR
Trigger: TCTGGAACTGCTTCTCCACAAACCACTACAGAGCAG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGCTCGTGCCATTGTGTaGGTTCTGCAGATCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAARAIV*VLQILL
Trigger: GAGAAGGATCTGCAGAACCAACACAATGGCACGAGC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGGTGTCTGCAGATATaGGTGGCAGGGGTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASWCLQI*VAGVQL
Trigger: CAGCTGGACCCCTGCCACCAATATCTGCAGACACCA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCCTTATCCACAGCTTTaGGTGGCTCATGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHPYPQL*VAHEVP
Trigger: TGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTTCTGGAGTTCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTCCTTATCCACAGCTTTaGGTGGCTCATGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LLEFCCQLLRINPWGFRLPYPQL*VAHEVP
Trigger: TGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGG...AAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGAACTCCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCTGCCGTGCTTCTTTTaGCTCACTGAGGGGGACCCT +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLPCFF*LTEGDP
Trigger: AGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCAG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGAACCTGCATGTCCTTaGATGGGTCAGGGAAGATAC +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPEPACP*MGQGRY
Trigger: GTATCTTCCCTGACCCATCAAAGGACATGCAGGTTC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGAATGCGGAGTTGTaGCACGGCAGCTTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLNAEL*HGSFGS
Trigger: GCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS TCA 90 bp GTCTCCTGCCTCATCATGAACTGGGCTTGCCGCTCTTCTTCTTGCTaGAAGAGAAGGTGTTGCTTCATAGACTGCAGCTCCTCCAACTTT +
Preference number: 5 (lower is better)
Translates to: VSCLIMNWACRSSSC*KRRCCFIDCSSSNF
Trigger: AAAGTTGGAGGAGCTGCAGTCTATGAAGCAACACCTTCTCTTTCAGCAAGAAGAAGAGCGGCAAGCCCAGTTCATGATGAGGCAGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp GCTCAAGCTGTAACTGTTGCTGAGCTAACGTCTCCTGCCTCATCATaGACTGGGCTTGCCGCTCTTCTTCTTGCTGAAAGAGAAGGTGTT +
Preference number: 5 (lower is better)
Translates to: AQAVTVAELTSPASS*TGLAALLLAEREGV
Trigger: AACACCTTCTCTTTCAGCAAGAAGAAGAGCGGCAAGCCCAGTTCATGATGAGGCAGGAGACGTTAGCTCAGCAACAGTTACAGCTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp CAGCTGAAGCTGTGGTGGTTGCATCTTCAGTTGCCCAAAATTGACTaGCTTCCAGAGCAGCATACTGACCTTCCAAAATTGCCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: QLKLWWLHLQLPKID*LPEQHTDLPKLPAL
Trigger: CAGAGCAGGCAATTTTGGAAGGTCAGTATGCTGCTCTGGAAGGCAGTCAATTTTGGGCAACTGAAGATGCAACCACCACAGCTTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 90 bp GGGGTCAGACATAGAACGCTGCATCATCTTGGCTGTCTTAGGACTTaGTGGGGGAACTTTAGCCATATCTGGATGCAGTACTTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: GVRHRTLHHLGCLRT*WGNFSHIWMQYFLW
Trigger: CCACAGAAAGTACTGCATCCAGATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCCAAGATGATGCAGCGTTCTATGTCTGACCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 90 bp CACAAGATCAAGCTCTCTGTCTATGTCCTGGAGAATCTTGGCTCGTaGCATTGTGTTGGTTCTGCAGATCCTTCTCCTGGAAACTGTGCC +
Preference number: 5 (lower is better)
Translates to: HKIKLSVYVLENLGS*HCVGSADPSPGNCA
Trigger: GGCACAGTTTCCAGGAGAAGGATCTGCAGAACCAACACAATGGCACGAGCCAAGATTCTCCAGGACATAGACAGAGAGCTTGATCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp ATCACTGGTTTGGGGGCGATTGGAGGTTTGCTTGGCTCAGGCCTGTaGGTAAATACAAGTCCAGATGGAATTGAAGATGGCTTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: ITGLGAIGGLLGSGL*VNTSPDGIEDGLGG
Trigger: TCCTCCTAAGCCATCTTCAATTCCATCTGGACTTGTATTTACCCACAGGCCTGAGCCAAGCAAACCTCCAATCGCCCCCAAACCAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp TTGTGTAGTTGTTGGAAGCTGAGGAATCACTGGTTTGGGGGCGATTaGAGGTTTGCTTGGCTCAGGCCTGTGGGTAAATACAAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: LCSCWKLRNHWFGGD*RFAWLRPVGKYKSR
Trigger: TCTGGACTTGTATTTACCCACAGGCCTGAGCCAAGCAAACCTCCAATCGCCCCCAAACCAGTGATTCCTCAGCTTCCAACAACTACACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp CACTACTGTATGGCTTATCCGCTTCATCCTGCAGAGCTGAGCGTATaGTATTTCCTAATGTGCCCAGTCCTGTGCCAAGAGAAGATCCCA +
Preference number: 5 (lower is better)
Translates to: HYCMAYPLHPAELSV*YFLMCPVLCQEKIP
Trigger: TGGGATCTTCTCTTGGCACAGGACTGGGCACATTAGGAAATACCATACGCTCAGCTCTGCAGGATGAAGCGGATAAGCCATACAGTAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTCCAAGCTCGCCTCGTaGCCCATGGCTCAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVSKLAS*PMAQGD
Trigger: GTCTCCCTGAGCCATGGGCAACGAGGCGAGCTTGGA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACACTACAGACAGTGGTTaGACACTCAGTGCATGTGTT +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHTTDSG*TLSACV
Trigger: AACACATGCACTGAGTGTCAAACCACTGTCTGTAGT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGTGCAGCATCCTTCTTaGGGGAAGTCTGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVVQHPS*GKSAVA
Trigger: AGCCACAGCAGACTTCCCCAAAGAAGGATGCTGCAC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTGGAGAGATCCTGTTTaGGTGCAGCATCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPWRDPV*VQHPSL
Trigger: CAAAGAAGGATGCTGCACCAAAACAGGATCTCTCCA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGGAGGGGCTGGCTaGGACAAAGAATCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLGGAG*DKESAS
Trigger: TGAGGCAGATTCTTTGTCCAAGCCAGCCCCTCCCAA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAGGCTTTGGGGACTGTaGAGGTGTGGGGACAGTTTG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPARLWGL*RCGDSL
Trigger: CAAACTGTCCCCACACCTCAACAGTCCCCAAAGCCT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGTCTGTGCCGAGCTTaGCGTTGCTGTTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFGLCRA*RCCLLS
Trigger: AGAGAGCAAACAGCAACGCAAAGCTCGGCACAGACC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGGGGCGATTGGAGGTTaGCTTGGCTCAGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVGAIGG*LGSGLW
Trigger: CCACAGGCCTGAGCCAAGCAAACCTCCAATCGCCCC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGATAGGCCTGTTGGTTaGGGGTGTATATCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPDRPVG*GCISVG
Trigger: ACCAACAGATATACACCCCAAACCAACAGGCCTATC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTGAAGCTGTGGTGGTaGCATCTTCAGTTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALKLWW*HLQLPK
Trigger: TTTGGGCAACTGAAGATGCAACCACCACAGCTTCAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCAATCTCTAAAGGTGTaGGGCGTTTCTTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHQSLKV*GVSCLW
Trigger: CCAAAGACAAGAAACGCCCAACACCTTTAGAGATTG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGACTTTCTATTCGGGTaGGTCTTGTGCTACTCACTT +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHDFLFG*VLCYSL
Trigger: AAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGAAGAGTACTGGTATaGTGTGTAAGGACTTGTCGG +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGRVLV*CVRTCR
Trigger: CCGACAAGTCCTTACACACAATACCAGTACTCTTCC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGAAATCTGTCACTTCTaGAGACCGGCGTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAEICHF*RPACLS
Trigger: ACTGAGACACGCCGGTCTCAAGAAGTGACAGATTTC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCGTAAGGATCCTCCATaGGGTCTTCCTCCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFRKDPP*GLPPPS
Trigger: TGAAGGCGGAGGAAGACCCAATGGAGGATCCTTACG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCTGCTGGCAGTTGTTTaGCTGCTTGTTTTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHLLAVV*LLVFQV
Trigger: CACTTGAAAAACAAGCAGCAAAACAACTGCCAGCAG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTTCCATCGGTAGGCTaGCTGCTGCCGTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFVPSVG*LLPCFF
Trigger: AAAGAAGCACGGCAGCAGCAAGCCTACCGATGGAAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGTTCCATCGGTAGGCTaGCTGCTGCCGTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASVPSVG*LLPCFF
Trigger: AAAGAAGCACGGCAGCAGCAAGCCTACCGATGGAAC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGAACCTGCATGTCCTTaGATGGGTCAGGGAAGATAC +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAEPACP*MGQGRY
Trigger: GTATCTTCCCTGACCCATCAAAGGACATGCAGGTTC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCCCATCGCTAGTTCCTaGGAACGGAGGGGCTTCTAT +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAPIASS*ERRGFY
Trigger: ATAGAAGCCCCTCCGTTCCAAGGAACTAGCGATGGG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGCGTCTTTTACTTGGTaGAATGCGGAGTTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTASFTW*NAELLH
Trigger: GTGCAACAACTCCGCATTCAACCAAGTAAAAGACGC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS TCA 90 bp ACCAGATCTTTGGAGGGTGATCCCAAGGGCCAACTGGTAATTGCTTaGCTAGCAGAAGAATCTGTTGGAGTCCCTGGTTCAGATGGCAAT +
Preference number: 5 (lower is better)
Translates to: TRSLEGDPKGQLVIA*LAEESVGVPGSDGN
Trigger: ATTGCCATCTGAACCAGGGACTCCAACAGATTCTTCTGCTAGTCAAGCAATTACCAGTTGGCCCTTGGGATCACCCTCCAAAGATCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp TGTTGGTTCTGCAGATCCTTCTCCTGGAAACTGTGCCCATTGTGCTaGATGTGGATTGAGTTCCTGTGGAAATCTCCTCAGGAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: CWFCRSFSWKLCPLC*MWIEFLWKSPQEVD
Trigger: ATCCACCTCCTGAGGAGATTTCCACAGGAACTCAATCCACATTCAGCACAATGGGCACAGTTTCCAGGAGAAGGATCTGCAGAACCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 90 bp CCAAAATTGACTGCCTTCCAGAGCAGCATACTGACCTTCCAAAATTaGCTGCTCTGTAGTGGTTTGTGGAGAAGCAGTTCCAGAAGGGTC +
Preference number: 5 (lower is better)
Translates to: PKLTAFQSSILTFQN*LLCSGLWRSSSRRV
Trigger: GACCCTTCTGGAACTGCTTCTCCACAAACCACTACAGAGCAGGCAATTTTGGAAGGTCAGTATGCTGCTCTGGAAGGCAGTCAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp TATATCTGTTGGTTTTTGTGTAGTTGTTGGAAGCTGAGGAATCACTaGTTTGGGGGCGATTGGAGGTTTGCTTGGCTCAGGCCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: YICWFLCSCWKLRNH*FGGDWRFAWLRPVG
Trigger: ACCCACAGGCCTGAGCCAAGCAAACCTCCAATCGCCCCCAAACCAGTGATTCCTCAGCTTCCAACAACTACACAAAAACCAACAGATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp GACTTGGTTGTACTGAGATCCACTACTTCCCCATCAGTGATTCCCTaGGATACGGTGCTATCAGTCCATCCATTTGTGACACCAACAGGA +
Preference number: 5 (lower is better)
Translates to: DLVVLRSTTSPSVIP*DTVLSVHPFVTPTG
Trigger: TCCTGTTGGTGTCACAAATGGATGGACTGATAGCACCGTATCCCAGGGAATCACTGATGGGGAAGTAGTGGATCTCAGTACAACCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp GCACAGATATCTCTGCTACCGTTTGAACTGCTATGCTGGAGACTTTaGAAAGGGGTTTGGTCTTGTCAGCCTCTGTCATGCTGTCACCAT +
Preference number: 5 (lower is better)
Translates to: AQISLLPFELLCWRL*KGVWSCQPLSCCHH
Trigger: ATGGTGACAGCATGACAGAGGCTGACAAGACCAAACCCCTTTCCAAAGTCTCCAGCATAGCAGTTCAAACGGTAGCAGAGATATCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp GGCATCCACTCGTGCCCGTATGGAGGGTGTTCTTATGGTTCCAACTaGTTCAGTTTGCACAGATATCTCTGCTACCGTTTGAACTGCTAT +
Preference number: 5 (lower is better)
Translates to: GIHSCPYGGCSYGSN*FSLHRYLCYRLNCY
Trigger: ATAGCAGTTCAAACGGTAGCAGAGATATCTGTGCAAACTGAACCAGTTGGAACCATAAGAACACCCTCCATACGGGCACGAGTGGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp CCCTTTCCACAAGATCAAGCTCTCTGTCTATGTCCTGGAGAATCTTaGCTCGTGCCATTGTGTTGGTTCTGCAGATCCTTCTCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: PFPQDQALCLCPGES*LVPLCWFCRSFSWK
Trigger: TTTCCAGGAGAAGGATCTGCAGAACCAACACAATGGCACGAGCCAAGATTCTCCAGGACATAGACAGAGAGCTTGATCTTGTGGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAGCGCCAGGCAACCTTaGCAGAAGACACCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGSARQP*QKTPPG
Trigger: TCCGGGAGGTGTCTTCTGCAAAGGTTGCCTGGCGCT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTCCTTCAGGTTTTCCTaGCTCCTTCTGAACCACTTT +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTSFRFS*LLLNHF
Trigger: AAAGTGGTTCAGAAGGAGCAAGGAAAACCTGAAGGA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTATCCCTACCAGGTCCTaGCTGCTTAGGAATCGGCTT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFIPTRS*LLRNRL
Trigger: AAGCCGATTCCTAAGCAGCAAGGACCTGGTAGGGAT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGCTGAGCTAAAGCCTTaGGCCCAGGCTGCTCCGATG +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVAELKP*AQAAPM
Trigger: CATCGGAGCAGCCTGGGCCAAAGGCTTTAGCTCAGC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTTGAGCTAGGGGTTTaGGTGTCCCCACCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVELGV*VSPPAG
Trigger: CCCAGCAGGTGGGGACACCAAAACCCCTAGCTCAAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGTTGAGCTAGGGGTTTaGGTGTCCCCACCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGVELGV*VSPPAG
Trigger: CCCAGCAGGTGGGGACACCAAAACCCCTAGCTCAAC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGCTGTGGGGATGATTaGCTCACTGCTGATGTAGTG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGCGDD*LTADVV
Trigger: CACTACATCAGCAGTGAGCAAATCATCCCCACAGCC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGGGACAGAAGGTTCTTaGGGAGGGGCTGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVGTEGS*GGAGLD
Trigger: GTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCCC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTTGTACGGGGTCAACTaGTTTTTGACCTTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTLYGVN*FLTFAL
Trigger: GAGAGCAAAGGTCAAAAACAAGTTGACCCCGTACAA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTCACAGGTATACTTTTaGCAGGTGCTGGTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASQVYF*QVLVVL
Trigger: AAGCACCACCAGCACCTGCAAAAAGTATACCTGTGA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGGAGCTTGTTCAGCTTaGGGCTCTAATTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTGACSA*GSNFSA
Trigger: AGCTGAAAAATTAGAGCCCAAAGCTGAACAAGCTCC...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGTGCAGGTGGCATTTaGCGTATGTCTCCAAGCTGT +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGAGGI*RMSPSC
Trigger: ACAGCTTGGAGACATACGCAAAATGCCACCTGCACC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGGTGCAGGTGGCATTTaGCGTATGTCTCCAAGCTGT +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVGAGGI*RMSPSC
Trigger: ACAGCTTGGAGACATACGCAAAATGCCACCTGCACC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCGTGTCGCTCAGACCTaGGGGGCTTTTAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVRVAQT*GAFRLL
Trigger: CAGCAGCCTAAAAGCCCCCAAGGTCTGAGCGACACG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGATAGGCCTGTTGGTTaGGGGTGTATATCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSADRPVG*GCISVG
Trigger: ACCAACAGATATACACCCCAAACCAACAGGCCTATC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTACAGAAACCAGATCTTaGGAGGGTGATCCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFTETRS*EGDPKG
Trigger: GCCCTTGGGATCACCCTCCAAAGATCTGGTTTCTGT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGAAAATGGAGCCAGGTaGTGTGGTGATAGCAAATGT +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPENGAR*CGDSKC
Trigger: ACATTTGCTATCACCACACAACCTGGCTCCATTTTC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCATCATGAACTGGGCTaGCCGCTCTTCTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAHHELG*PLFFLL
Trigger: CAGCAAGAAGAAGAGCGGCAAGCCCAGTTCATGATG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTGGTTGCATCTTCAGTaGCCCAAAATTGACTGCCTT +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPWLHLQ*PKIDCL
Trigger: AAGGCAGTCAATTTTGGGCAACTGAAGATGCAACCA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACAACGGTGTACCATCCTaGGCTTTGTGGTATTTCAAT +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHNGVPS*ALWYFN
Trigger: ATTGAAATACCACAAAGCCAAGGATGGTACACCGTT...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGAAAGGGGTTTGGTCTaGTCAGCCTCTGTCATGCTG +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVERGLV*SASVML
Trigger: CAGCATGACAGAGGCTGACAAGACCAAACCCCTTTC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGTGTTGGGCGTTTCTaGTCTTTGGGTGGAGATGTG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGVGRF*SLGGDV
Trigger: CACATCTCCACCCAAAGACAAGAAACGCCCAACACC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCTGGCTGAATTCAGTTaGGGGAGCAGTTCTTGGTCG +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERLAEFS*GSSSWS
Trigger: CGACCAAGAACTGCTCCCCAAACTGAATTCAGCCAG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACGAATCACTTCATAGTTaGAGGTTATCTTGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHESLHS*RLSWAP
Trigger: TGGAGCCCAAGATAACCTCAAACTATGAAGTGATTC...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACTGCTATCATAAGGGGTaGGTTGCGAATCACTTCATA +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHCYHKG*VANHFI
Trigger: TATGAAGTGATTCGCAACCAACCCCTTATGATAGCA...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCAGATATGCTTGATATaGGACTGCTTGCCATGCTAC +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTQICLI*DCLPCY
Trigger: GTAGCATGGCAAGCAGTCCAATATCAAGCATATCTG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGGTGTCTGCAGATATaGGTGGCAGGGGTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGWCLQI*VAGVQL
Trigger: CAGCTGGACCCCTGCCACCAATATCTGCAGACACCA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGACGCTGGTTTTGCTTaGACTGCGAGATGGTCCATG +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVDAGFA*TARWSM
Trigger: CATGGACCATCTCGCAGTCAAAGCAAAACCAGCGTC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTGAATGCGGAGTTGTaGCACGGCAGCTTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLNAEL*HGSFGS
Trigger: GCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATGGTTGAATGCGGAGTaGTTGCACGGCAGCTTCGGC +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGWLNAE*LHGSFG
Trigger: GCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTACAACCTAGAAGTTaGGTCAGCTGCAAACTTGGC +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVQPRS*VSCKLG
Trigger: GCCAAGTTTGCAGCTGACCAAACTTCTAGGTTGTAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGTGAGCAGAGGATGTaGAAAACTGAAAGCAAACAG +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGEQRM*KTESKQ
Trigger: CTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTTGCTCCTCAGTGAGGTaGCATTGCCTTATCACATAT +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPCSSVR*HCLITY
Trigger: ATATGTGATAAGGCAATGCAACCTCACTGAGGAGCA...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS TCA 90 bp AAGATTGATGCTCCAAACCCAAAGAGTTTCCCAGTCACGGTCTCTTaGGGAGTTGTAGGCTGTGATTTGGGGGCATCAGTAATACTTCCC +
Preference number: 5 (lower is better)
Translates to: KIDAPNPKSFPVTVS*GVVGCDLGASVILP
Trigger: GGGAAGTATTACTGATGCCCCCAAATCACAGCCTACAACTCCTCAAGAGACCGTGACTGGGAAACTCTTTGGGTTTGGAGCATCAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp TGTGAGAGAAGGTGTGTCAGAGGGTGGGACAGATGTAGCACTTTCTaGAGGCTCCGAGTAGGTCAAAATCAGCGATTCATGGGCAATTAT +
Preference number: 5 (lower is better)
Translates to: CERRCVRGWDRCSTF*RLRVGQNQRFMGNY
Trigger: ATAATTGCCCATGAATCGCTGATTTTGACCTACTCGGAGCCTTCAGAAAGTGCTACATCTGTCCCACCCTCTGACACACCTTCTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp AAAGACCTGGTCACTTGGTATCCTGTATGGGGGCTCAGCATGCTTTaGTGTTGTAAGTTGGAGTGGTGTTGTCATTGCATGTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: KDLVTWYPVWGLSML*CCKLEWCCHCMFCT
Trigger: GGTGCAGAACATGCAATGACAACACCACTCCAACTTACAACATCAAAGCATGCTGAGCCCCCATACAGGATACCAAGTGACCAGGTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp GGTGTACCATCCTTGGCTTTGTGGTATTTCAATTGCCACAACAGCTaGAGCTGTGGTGGTTGCATCTTCAGTTGCCCAAAATTGACTGCC +
Preference number: 5 (lower is better)
Translates to: GVPSLALWYFNCHNS*SCGGCIFSCPKLTA
Trigger: GGCAGTCAATTTTGGGCAACTGAAGATGCAACCACCACAGCTTCAGCTGTTGTGGCAATTGAAATACCACAAAGCCAAGGATGGTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 90 bp CTGAATTCAGTTTGGGGAGCAGTTCTTGGTCGCTCAATGCCATGCTaGCTTTCTATTCGGGTTGGTCTTGTGCTACTCACTTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: LNSVWGAVLGRSMPC*LSIRVGLVLLTSLS
Trigger: TGACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCGACCAAGAACTGCTCCCCAAACTGAATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 90 bp GATGATGAAGATACAAGGTCAGTGGTTGGCTTTACCATCTTGGGCTaGTTTGGTTTATCATCAGCAACAGGGGCCTTGTCCTGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: DDEDTRSVVGFTILG*FGLSSATGALSCSD
Trigger: ATCTGAGCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAACCACTGACCTTGTATCTTCATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp CGTCTTCATCATGCCATGAGTGACGTCTTCCTGCATCTTCATCAATaGTTGTGCTACTTTTTCGAGTCAGTCGTCTGTGTTTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: RLHHAMSDVFLHLHQ*LCYFFESVVCVSLL
Trigger: CAGCAGGGAAACACAGACGACTGACTCGAAAAAGTAGCACAAGCATTGATGAAGATGCAGGAAGACGTCACTCATGGCATGATGAAGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp TTGCTGATGATGAAGATACAAGGTCAGTGGTTGGCTTTACCATCTTaGGCTGCTTTGGTTTATCATCAGCAACAGGGGCCTTGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LLMMKIQGQWLALPS*AALVYHQQQGPCPA
Trigger: AGCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAACCACTGACCTTGTATCTTCATCATCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp CTCTTCTGTCGGAGATGCATCTTCAATGGGAGAGAGATTACTAGGTaGTGTCTTTGGCCTTTCCCTTCTTCTCTGAGCTCGAAGTTCATC +
Preference number: 5 (lower is better)
Translates to: LFCRRCIFNGREITR*CLWPFPSSLSSKFI
Trigger: GATGAACTTCGAGCTCAGAGAAGAAGGGAAAGGCCAAAGACACCACCTAGTAATCTCTCTCCCATTGAAGATGCATCTCCGACAGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp CTTGGTATCCTGTATGGGGGCTCAGCATGCTTTGATGTTGTAAGTTaGAGTGGTGTTGTCATTGCATGTTCTGCACCCACTAGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LGILYGGSACFDVVS*SGVVIACSAPTRLS
Trigger: AGAAAGCCTAGTGGGTGCAGAACATGCAATGACAACACCACTCCAACTTACAACATCAAAGCATGCTGAGCCCCCATACAGGATACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp GTCAGACATAGAACGCTGCATCATCTTGGCTGTCTTAGGACTTGCTaGGGGAACTTTAGCCATATCTGGATGCAGTACTTTCTGTGGACT +
Preference number: 5 (lower is better)
Translates to: VRHRTLHHLGCLRTC*GNFSHIWMQYFLWT
Trigger: AGTCCACAGAAAGTACTGCATCCAGATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCCAAGATGATGCAGCGTTCTATGTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp TTTGCAGACTCCCTTTCCACAAGATCAAGCTCTCTGTCTATGTCCTaGAGAATCTTGGCTCGTGCCATTGTGTTGGTTCTGCAGATCCTT +
Preference number: 5 (lower is better)
Translates to: FADSLSTRSSSLSMS*RILARAIVLVLQIL
Trigger: AAGGATCTGCAGAACCAACACAATGGCACGAGCCAAGATTCTCCAGGACATAGACAGAGAGCTTGATCTTGTGGAAAGGGAGTCTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp GCAGTTTTCGGTCCAGACCATGTCCATTTTCCAAACGAGACTCCCTaGGTTTATCAAACCAATCTGTTTCCTCACGACGCAGATGATAGG +
Preference number: 5 (lower is better)
Translates to: AVFGPDHVHFPNETP*VYQTNLFPHDADDR
Trigger: CCTATCATCTGCGTCGTGAGGAAACAGATTGGTTTGATAAACCCAGGGAGTCTCGTTTGGAAAATGGACATGGTCTGGACCGAAAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp CGGAGATGGCCTTCTGATGATGATTTTGAGCTACCAGGACTACTATaGGATTTCTCAATGGTGGGAACCTGCATGTCCTTTGATGGGTCA +
Preference number: 5 (lower is better)
Translates to: RRWPSDDDFELPGLL*DFSMVGTCMSFDGS
Trigger: TGACCCATCAAAGGACATGCAGGTTCCCACCATTGAGAAATCCCATAGTAGTCCTGGTAGCTCAAAATCATCATCAGAAGGCCATCTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTCTTCCTGATTGCTTaGGAGGATGACTACTATCCA +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVFLIA*EDDYYP
Trigger: TGGATAGTAGTCATCCTCCAAAGCAATCAGGAAGAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTTACTGAGACCAGGTaGAGCTGGACGCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVFTETR*SWTPRV
Trigger: GACCCTGGGCGTCCAGCTCAACCTGGTCTCAGTAAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTACCACTTTTTGTTTCTaGGTGGTTTCTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTTTFCF*VVSSWD
Trigger: ATCCCAGGAAGAAACCACCAAGAAACAAAAAGTGGT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGTTGAGCCAATGGCTTaGTTAGCCCTGAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGVEPMA*LALRAE
Trigger: CTCAGCCCTCAGGGCTAACAAAGCCATTGGCTCAAC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCCCCACCTGCTGGGTaGGAGGCTTTGCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSPPAG*EALLAL
Trigger: CAGGGCCAGCAAAGCCTCCAACCCAGCAGGTGGGGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTAGAAGTTCAGTGGTATaGCAAAGAGGACAGATGGTT +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTRSSVV*QRGQMV
Trigger: AACCATCTGTCCTCTTTGCAATACCACTGAACTTCT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGTGCAGTCTTCAGTTaGGGCTGGGGTGATGACGGA +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGAVFS*GWGDDG
Trigger: TCCGTCATCACCCCAGCCCAAACTGAAGACTGCACC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAGGCTCAGGTGCCTaGGAGAGATCCTGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLGSGA*ERSCFG
Trigger: ACCAAAACAGGATCTCTCCAAGGCACCTGAGCCTAA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGGTTTAGGACTCATTTaGGTTTGTGCTTTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPGLGLI*VCAFLG
Trigger: ACCCAAGAAAGCACAAACCAAAATGAGTCCTAAACC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCTGGGGCTGATGTTTTaGCCTCTGGGAGTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVLGLMF*PLGVAF
Trigger: AAAAGCTACTCCCAGAGGCAAAAACATCAGCCCCAG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGGGGCGATTGGAGGTTaGCTTGGCTCAGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYGAIGG*LGSGLW
Trigger: CCACAGGCCTGAGCCAAGCAAACCTCCAATCGCCCC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTGTTTCTGTGAGGGATTaGGAAAATCTTGGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPVSVRD*ENLGED
Trigger: GTCTTCACCAAGATTTTCCAAATCCCTCACAGAAAC...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCTGAAGCTGTGGTGGTaGCATCTTCAGTTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLKLWW*HLQLPK
Trigger: TTTGGGCAACTGAAGATGCAACCACCACAGCTTCAG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGTTGGACTCAGAGGCTaGGGGTCAGACATAGAACGC +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGVGLRG*GSDIER
Trigger: GCGTTCTATGTCTGACCCCAAGCCTCTGAGTCCAAC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTGTGCTGAATGTGGATaGAGTTCCTGTGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSACAECG*SSCGNL
Trigger: GAGATTTCCACAGGAACTCAATCCACATTCAGCACA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTATGTCCTGGAGAATCTaGGCTCGTGCCATTGTGTTG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAMSWRI*ARAIVL
Trigger: CAACACAATGGCACGAGCCAAGATTCTCCAGGACAT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAATGCCGCTGTTCCTTaGGTGATCTCTCCAATGTCG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPANAAVP*VISPMS
Trigger: CGACATTGGAGAGATCACCAAAGGAACAGCGGCATT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGAAATCTGTCACTTCTaGAGACCGGCGTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFEICHF*RPACLS
Trigger: ACTGAGACACGCCGGTCTCAAGAAGTGACAGATTTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCTGCTGGCAGTTGTTTaGCTGCTTGTTTTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSALLAVV*LLVFQV
Trigger: CACTTGAAAAACAAGCAGCAAAACAACTGCCAGCAG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTATGGCTGCTGGCAGTaGTTTTGCTGCTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAYGCWQ*FCCLFF
Trigger: GAAAAACAAGCAGCAAAACAACTGCCAGCAGCCATA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TCTGCTGCCAACTGCTTAGGATCAACCCCTGGGGATTTCGCCTTATCCACAGCTGAATCTGATAGCATATaGAGGTCCAGTCTTACACAT +
Preference number: 5 (lower is better)
Translates to: SAANCLGSTPGDFALSTAESDSI*RSSLTH
Trigger: ATGTGTAAGACTGGACCTCAATATGCTATCAGATTC...AGCTGTGGATAAGGCGAAATCCCCAGGGGTTGATCCTAAGCAGTTGGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTGCCGTGCTTCTTTTaGCTCACTGAGGGGGACCCT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLPCFF*LTEGDP
Trigger: AGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTGTTTAGTCCTTCTCTaGTACTCAGCACTTGCATTC +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTCLVLL*YSALAF
Trigger: GAATGCAAGTGCTGAGTACAAGAGAAGGACTAAACA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGAACCTGCATGTCCTTaGATGGGTCAGGGAAGATAC +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFEPACP*MGQGRY
Trigger: GTATCTTCCCTGACCCATCAAAGGACATGCAGGTTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATGGTTGAATGCGGAGTaGTTGCACGGCAGCTTCGGC +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGWLNAE*LHGSFG
Trigger: GCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTATCAGACTGAGTTCTTaGAATGGGGAGGACTCCTGC +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVIRLSS*NGEDSC
Trigger: GCAGGAGTCCTCCCCATTCAAAGAACTCAGTCTGAT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTACAGAATGGACCCAATaGTGCTCCTCAGTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASTEWTQ*CSSVRL
Trigger: CAACCTCACTGAGGAGCACAATTGGGTCCATTCTGT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS TCA 90 bp TCTGGTTTGGGCGATTTCTCCAGTTTTGTGGGAAGGACAGCCTTTTaGGGCTCAGCTGTTAAAGATTTGCTATCCTTAATAGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: SGLGDFSSFVGRTAF*GSAVKDLLSLIGGG
Trigger: GCCACCACCTATTAAGGATAGCAAATCTTTAACAGCTGAGCCTCAAAAGGCTGTCCTTCCCACAAAACTGGAGAAATCGCCCAAACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS TCA 90 bp TTTGCTTGGCTCAGGCCTGTGGGTAAATACAAGTCCAGATGGAATTaGAGATGGCTTAGGAGGAACAGGAGGAGGTGCAGTAGTACATAT +
Preference number: 5 (lower is better)
Translates to: FAWLRPVGKYKSRWN*RWLRRNRRRCSSTY
Trigger: ATATGTACTACTGCACCTCCTCCTGTTCCTCCTAAGCCATCTTCAATTCCATCTGGACTTGTATTTACCCACAGGCCTGAGCCAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp CTGATGGTACAAAGTTTGTTGCTCAAAATGAGACTGTTGAGTGTATaGGGTGGGTGCTTGGGTAGGAAGAGCAGGGGAAGAGTACTGGTA +
Preference number: 5 (lower is better)
Translates to: LMVQSLLLKMRLLSV*GGCLGRKSRGRVLV
Trigger: TACCAGTACTCTTCCCCTGCTCTTCCTACCCAAGCACCCACCTCATACACTCAACAGTCTCATTTTGAGCAACAAACTTTGTACCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 90 bp TCAGTGGTTCGAAGGAGACGGTCTGTTTTTGACAGATCCTTTTCATaGAGGCTAAATGCGGTGCTTAATGCCGCTGTTCCTTTGGTGATC +
Preference number: 5 (lower is better)
Translates to: SVVRRRRSVFDRSFS*RLNAVLNAAVPLVI
Trigger: GATCACCAAAGGAACAGCGGCATTAAGCACCGCATTTAGCCTTCATGAAAAGGATCTGTCAAAAACAGACCGTCTCCTTCGAACCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 90 bp AATCTAGAGGAAGACTGTAAAGGTGCTAGGAAATCTGTCACTTCTTaGGACCGGCGTGTCTCAGTGGTTCGAAGGAGACGGTCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: NLEEDCKGARKSVTS*DRRVSVVRRRRSVF
Trigger: AAAAACAGACCGTCTCCTTCGAACCACTGAGACACGCCGGTCTCAAGAAGTGACAGATTTCCTAGCACCTTTACAGTCTTCCTCTAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 90 bp TTGGTCGCTCAATGCCATGCTGACTTTCTATTCGGGTTGGTCTTGTaGTACTCACTTCACTGTCAGACATGTAATCACGATCCTCAGCTA +
Preference number: 5 (lower is better)
Translates to: LVAQCHADFLFGLVL*YSLHCQTCNHDPQL
Trigger: TAGCTGAGGATCGTGATTACATGTCTGACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp ATCCTTGGCTTTGTGGTATTTCAATTGCCACAACAGCTGAAGCTGTaGTGGTTGCATCTTCAGTTGCCCAAAATTGACTGCCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: ILGFVVFQLPQQLKL*WLHLQLPKIDCLPE
Trigger: CTCTGGAAGGCAGTCAATTTTGGGCAACTGAAGATGCAACCACCACAGCTTCAGCTGTTGTGGCAATTGAAATACCACAAAGCCAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp CATCTTGGCTGTCTTAGGACTTGCTGGGGGAACTTTAGCCATATCTaGATGCAGTACTTTCTGTGGACTTATATCATCAGGGAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: HLGCLRTCWGNFSHI*MQYFLWTYIIREGF
Trigger: AAACCCCTCCCTGATGATATAAGTCCACAGAAAGTACTGCATCCAGATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCCAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp AGCAGTTCTTGGTCGCTCAATGCCATGCTGACTTTCTATTCGGGTTaGTCTTGTGCTACTCACTTCACTGTCAGACATGTAATCACGATC +
Preference number: 5 (lower is better)
Translates to: SSSWSLNAMLTFYSG*SCATHFTVRHVITI
Trigger: GATCGTGATTACATGTCTGACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCGACCAAGAACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp TTGTGGTGGTATAAACTGGCTGAATTCAGTTTGGGGAGCAGTTCTTaGTCGCTCAATGCCATGCTGACTTTCTATTCGGGTTGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: LWWYKLAEFSLGSSS*SLNAMLTFYSGWSC
Trigger: ACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCGACCAAGAACTGCTCCCCAAACTGAATTCAGCCAGTTTATACCACCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp AAGGTGCTAGGAAATCTGTCACTTCTTGAGACCGGCGTGTCTCAGTaGTTCGAAGGAGACGGTCTGTTTTTGACAGATCCTTTTCATGAA +
Preference number: 5 (lower is better)
Translates to: KVLGNLSLLETGVSQ*FEGDGLFLTDPFHE
Trigger: TTCATGAAAAGGATCTGTCAAAAACAGACCGTCTCCTTCGAACCACTGAGACACGCCGGTCTCAAGAAGTGACAGATTTCCTAGCACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGTTGAGCCAATGGCTTaGTTAGCCCTGAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGVEPMA*LALRAE
Trigger: CTCAGCCCTCAGGGCTAACAAAGCCATTGGCTCAAC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGTTGTGAAGGAGGCTTaGTTGGGCCAGTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENVVKEA*LGQSAG
Trigger: CCCAGCAGACTGGCCCAACAAAGCCTCCTTCACAAC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTGCAGCATCCTTCTTaGGGGAAGTCTGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVQHPS*GKSAVA
Trigger: AGCCACAGCAGACTTCCCCAAAGAAGGATGCTGCAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTGGGAGGGGCTGGCTaGGACAAAGAATCTGCCTCA +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLGGAG*DKESAS
Trigger: TGAGGCAGATTCTTTGTCCAAGCCAGCCCCTCCCAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCCATCTTGGGCTGCTTaGGTTTATCATCAGCAACAG +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERPSWAA*VYHQQQ
Trigger: CTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTATACAAGGTCAGTGGTaGGCTTTACCATCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVIQGQW*ALPSWA
Trigger: AGCCCAAGATGGTAAAGCCAACCACTGACCTTGTAT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCACAGGTATACTTTTaGCAGGTGCTGGTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASSQVYF*QVLVVL
Trigger: AAGCACCACCAGCACCTGCAAAAAGTATACCTGTGA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGCGATTTCTCCAGTTTaGTGGGAAGGACAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERAISPV*WEGQPF
Trigger: AAAAGGCTGTCCTTCCCACAAAACTGGAGAAATCGC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTCTGGGAGTAGCTTTTaGTCTTCAGGGGTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERSGSSF*SSGVGF
Trigger: AAAGCCAACCCCTGAAGACAAAAAGCTACTCCCAGA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCCACCTGATCAGGTTTaGCTGTGCATGGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVPPDQV*LCMVAV
Trigger: CACAGCCACCATGCACAGCAAAACCTGATCAGGTGG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAAAGCTGCTCTTTCATaGGAAGGGCTATTACAGAAG +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAKAALS*EGLLQK
Trigger: CTTCTGTAATAGCCCTTCCAATGAAAGAGCAGCTTT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTCTCCATAGTAATAGTTaGCAAACTGGCACTGATATC +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTLHSNS*QTGTDI
Trigger: GATATCAGTGCCAGTTTGCAAACTATTACTATGGAG...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTGAAAGAGAAGGTGTaGCTTCATAGACTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLKEKV*LHRLQL
Trigger: GAGCTGCAGTCTATGAAGCAACACCTTCTCTTTCAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGATCTGCCGAATCTTTaGCTCCTCCAGCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGDLPNL*LLQLLV
Trigger: CACCAGCAGCTGGAGGAGCAAAAGATTCGGCAGATC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTAGATTCTGTTTGGGTTaGTGGTGGTATAAACTGGCT +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSARFCLG*WWYKLA
Trigger: AGCCAGTTTATACCACCACAAACCCAAACAGAATCT...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTGCTATCATAAGGGGTaGGTTGCGAATCACTTCATA +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSACYHKG*VANHFI
Trigger: TATGAAGTGATTCGCAACCAACCCCTTATGATAGCA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AACAGGGCCTTTCTGCTCACCTCCTTCTGGCTTGACTGGTCCATCAGACATCACCTCAAGTCTAAACTATaGTACTTACTACCAAGATGG +
Preference number: 5 (lower is better)
Translates to: NRAFLLTSFWLDWSIRHHLKSKL*YLLPRW
Trigger: CCATCTTGGTAGTAAGTACAATAGTTTAGACTTGAG...GTGATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGAGCAGAAAGGCCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCGTAAGGATCCTCCATaGGGTCTTCCTCCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVRKDPP*GLPPPS
Trigger: TGAAGGCGGAGGAAGACCCAATGGAGGATCCTTACG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAAAAGTGATGTCATCTaGAAGGAGCCTTGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAKSDVI*KEPCPG
Trigger: TCCAGGGCAAGGCTCCTTCAAGATGACATCACTTTT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTAAAAGTGATGTCATCTaGAAGGAGCCTTGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASKSDVI*KEPCPG
Trigger: TCCAGGGCAAGGCTCCTTCAAGATGACATCACTTTT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACAGGCAATGAGTGGCTaGATCCAAACTGATCCCTGG +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGQAMSG*IQTDPW
Trigger: CCAGGGATCAGTTTGGATCAAGCCACTCATTGCCTG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTGAGTTCTTTGAATGGGGAGGACTCCTGCTATGCTGTGTCTGTGCTGCTTCCTCTGTATAATTTGCTCTaGATGTTGACTGAGTGGTCT +
Preference number: 5 (lower is better)
Translates to: LSSLNGEDSCYAVSVLLPLYNLL*MLTEWS
Trigger: AGACCACTCAGTCAACATCAAGAGCAAATTATACAG...AGGAAGCAGCACAGACACAGCATAGCAGGAGTCCTCCCCATTCAAAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTTCGCCTTATCCACAGCTTTTGGTGGCTCATGAAGTTCCAGATGCTGGGAATCCTTATCCACAGCTTTaGGTGGCTCATGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: ISPYPQLLVAHEVPDAGNPYPQL*VAHEVP
Trigger: TGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGG...ATTCCCAGCATCTGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGGCGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413807.6
ENST00000456006.2
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCCTTATCCACAGCTTTaGGTGGCTCATGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVPYPQL*VAHEVP
Trigger: TGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACTGCCGTGCTTCTTTTaGCTCACTGAGGGGGACCCT +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILLPCFF*LTEGDP
Trigger: AGGGTCCCCCTCAGTGAGCAAAAAGAAGCACGGCAG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGTTCCATCGGTAGGCTaGCTGCTGCCGTGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVVPSVG*LLPCFF
Trigger: AAAGAAGCACGGCAGCAGCAAGCCTACCGATGGAAC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTCCAGTGTTTTCTTCTaGAGCTGTTCCATGGAAATA +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTSSVFF*SCSMEI
Trigger: TATTTCCATGGAACAGCTCAAGAAGAAAACACTGGA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGACGCTGGTTTTGCTTaGACTGCGAGATGGTCCATG +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGDAGFA*TARWSM
Trigger: CATGGACCATCTCGCAGTCAAAGCAAAACCAGCGTC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTGAATGCGGAGTTGTaGCACGGCAGCTTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLNAEL*HGSFGS
Trigger: GCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATGGTTGAATGCGGAGTaGTTGCACGGCAGCTTCGGC +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILWLNAE*LHGSFG
Trigger: GCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGCGTCTTTTACTTGGTaGAATGCGGAGTTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVASFTW*NAELLH
Trigger: GTGCAACAACTCCGCATTCAACCAAGTAAAAGACGC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTATGAGAGCTTTAAATTaGGGGATGTTCTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTMRALN*GMFLLC
Trigger: ACACAGCAAGAACATCCCCAAATTTAAAGCTCTCAT...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS TCA 90 bp GAAAGCTGCTCTTTCATTGGAAGGGCTATTACAGAAGAAGGTGGGTaGTCAAACACGGTTTCGGATAAGCTACTTTTTGTTCGTTCGGCC +
Preference number: 5 (lower is better)
Translates to: ESCSFIGRAITEEGG*SNTVSDKLLFVRSA
Trigger: GGCCGAACGAACAAAAAGTAGCTTATCCGAAACCGTGTTTGATCACCCACCTTCTTCTGTAATAGCCCTTCCAATGAAAGAGCAGCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp GAAACTTCAGTAGTGAGAAACTGTGTAACTGATGTGGGAGCTGCTTaGAATGAAGAGGGTGCTGTGACAGGGGTAGCAGAAAATGTCTGT +
Preference number: 5 (lower is better)
Translates to: ETSVVRNCVTDVGAA*NEEGAVTGVAENVC
Trigger: ACAGACATTTTCTGCTACCCCTGTCACAGCACCCTCTTCATTTCAAGCAGCTCCCACATCAGTTACACAGTTTCTCACTACTGAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp GGAAATGCTGCTGAGACCAACACTAGGAGCTGTACTTCTGGTTGCTaGAACCTCAGTCTTGGAAACTTCAGTAGTGAGAAACTGTGTAAC +
Preference number: 5 (lower is better)
Translates to: GNAAETNTRSCTSGC*NLSLGNFSSEKLCN
Trigger: GTTACACAGTTTCTCACTACTGAAGTTTCCAAGACTGAGGTTTCAGCAACCAGAAGTACAGCTCCTAGTGTTGGTCTCAGCAGCATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp TGTCATTCTTGCTGTGGAATACTGTGGGGTACTAATCCCAGCTCCTaGAATGACTTGTCGTGTTTCTGGATATGGACCTGTAGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: CHSCCGILWGTNPSS*NDLSCFWIWTCSLA
Trigger: AGCAAGACTACAGGTCCATATCCAGAAACACGACAAGTCATTTCAGGAGCTGGGATTAGTACCCCACAGTATTCCACAGCAAGAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp CTCTGTCATGCTGTCACCATATTTCCCTACACGAGCTTTCCTCCTTaGTCTAGTAGGCATATCCCACTCATCCTGATCTTCATCATCAGT +
Preference number: 5 (lower is better)
Translates to: LCHAVTIFPYTSFPP*SSRHIPLILIFIIS
Trigger: ACTGATGATGAAGATCAGGATGAGTGGGATATGCCTACTAGATCAAGGAGGAAAGCTCGTGTAGGGAAATATGGTGACAGCATGACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 90 bp TGGAACAAGAACAAGGAAGCTCACTCATCTGTGTGCTGTGTTTCTTaGTCTCCAACCTTGATCACTGCCATGCCATCTTCCATAAGCTTC +
Preference number: 5 (lower is better)
Translates to: WNKNKEAHSSVCCVS*SPTLITAMPSSISF
Trigger: GAAGCTTATGGAAGATGGCATGGCAGTGATCAAGGTTGGAGATCAAGAAACACAGCACACAGATGAGTGAGCTTCCTTGTTCTTGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456006.2
CDS GCA 90 bp ATAGGAAAGACCTGGTCACTTGGTATCCTGTATGGGGGCTCAGCATaGTTTGATGTTGTAAGTTGGAGTGGTGTTGTCATTGCATGTTCT +
Preference number: 5 (lower is better)
Translates to: IGKTWSLGILYGGSA*FDVVSWSGVVIACS
Trigger: AGAACATGCAATGACAACACCACTCCAACTTACAACATCAAAGCATGCTGAGCCCCCATACAGGATACCAAGTGACCAGGTCTTTCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp AGCAGCATACTGACCTTCCAAAATTGCCTGCTCTGTAGTGGTTTGTaGAGAAGCAGTTCCAGAAGGGTCATAGTTATACTGGTAGATCTG +
Preference number: 5 (lower is better)
Translates to: SSILTFQNCLLCSGL*RSSSRRVIVILVDL
Trigger: CAGATCTACCAGTATAACTATGACCCTTCTGGAACTGCTTCTCCACAAACCACTACAGAGCAGGCAATTTTGGAAGGTCAGTATGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 90 bp AGTTTTCCCGTTCATCTGTATAATTTGCTCTTGATGTTGACTGAGTaGTCTAGAGTGGACCAATCTTTCCGGCAGTTTTCGGTCCAGACC +
Preference number: 5 (lower is better)
Translates to: SFPVHLYNLLLMLTE*SRVDQSFRQFSVQT
Trigger: GGTCTGGACCGAAAACTGCCGGAAAGATTGGTCCACTCTAGACCACTCAGTCAACATCAAGAGCAAATTATACAGATGAACGGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTACTACTATCCAACTCTaGTTTCCTGTGCATGGAAGG +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASTTIQL*FPVHGR
Trigger: CCTTCCATGCACAGGAAACAAGAGTTGGATAGTAGT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTTTACTGAGACCAGGTaGAGCTGGACGCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYFTETR*SWTPRV
Trigger: GACCCTGGGCGTCCAGCTCAACCTGGTCTCAGTAAA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATCCCTACCAGGTCCTaGCTGCTTAGGAATCGGCTT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVIPTRS*LLRNRL
Trigger: AAGCCGATTCCTAAGCAGCAAGGACCTGGTAGGGAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTTTCCAGGAGTTGGTaGCTGAATAGGTGGTTTGGA +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERFSRSW*LNRWFG
Trigger: TCCAAACCACCTATTCAGCAACCAACTCCTGGAAAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGTGAAGGAGGCTTTGTaGGGCCAGTCTGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLVKEAL*GQSAGQ
Trigger: CTGCCCAGCAGACTGGCCCAACAAAGCCTCCTTCAC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTGTACGGGGTCAACTaGTTTTTGACCTTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALYGVN*FLTFAL
Trigger: GAGAGCAAAGGTCAAAAACAAGTTGACCCCGTACAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTTGTAGGCTGTGATTaGGGGGCATCAGTAATACTT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFVVGCD*GASVIL
Trigger: AAGTATTACTGATGCCCCCAAATCACAGCCTACAAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTTCAGCTGTTAAAGATTaGCTATCCTTAATAGGTGGT +
Preference number: 5 (lower is better)
Translates to: LAGFGLGCHWLVEADYQTSAVKD*LSLIGG
Trigger: ACCACCTATTAAGGATAGCAAATCTTTAACAGCTGA...AGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCATTCAGTGCAAGTATaGAAGTTAGGAGGATCCTTA +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAHSVQV*KLGGSL
Trigger: TAAGGATCCTCCTAACTTCAATACTTGCACTGAATG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGTGCCGAGCTTTGCGTaGCTGTTTGCTCTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVVPSFA*LFALSF
Trigger: AAAGGAGAGAGCAAACAGCAACGCAAAGCTCGGCAC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAATCTTGGTGAAGACTaGTTGGAGTGTGGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFNLGED*LECGES
Trigger: ACTTTCCCCACACTCCAACAAGTCTTCACCAAGATT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGACAGAAACCAGATCTTaGGAGGGTGATCCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVTETRS*EGDPKG
Trigger: GCCCTTGGGATCACCCTCCAAAGATCTGGTTTCTGT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGCTGAAACCTCAGTCTaGGAAACTTCAGTAGTGAGA +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVAETSV*ETSVVR
Trigger: TCTCACTACTGAAGTTTCCAAGACTGAGGTTTCAGC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGAGCTGTACTTCTGGTaGCTGAAACCTCAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGELYFW*LKPQSW
Trigger: CCAAGACTGAGGTTTCAGCAACCAGAAGTACAGCTC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGTGGTGGTGTCATTCTaGCTGTGGAATACTGTGGGG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVVVVSF*LWNTVG
Trigger: CCCCACAGTATTCCACAGCAAGAATGACACCACCAC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTGTTCTCGGAACCTTaGAATTTCCTGACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERLFSEP*NFLTFP
Trigger: TGGGAACGTCAGGAAATTCAAAGGTTCCGAGAACAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTGCTGGTGAAGCTGTaGTTGCAGCTGTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLLVKL*LQLLDL
Trigger: CAGATCCAACAGCTGCAACAACAGCTTCACCAGCAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTGCTGGTGAAGCTGTaGTTGCAGCTGTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLLVKL*LQLLDL
Trigger: CAGATCCAACAGCTGCAACAACAGCTTCACCAGCAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGTACCATCCTTGGCTTaGTGGTATTTCAATTGCCAC +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAVPSLA*WYFNCH
Trigger: GTGGCAATTGAAATACCACAAAGCCAAGGATGGTAC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGATCTTCGTCATCCGTTaGTACACCACTGTCCACTAT +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERIFVIR*YTTVHY
Trigger: ATAGTGGACAGTGGTGTACAAACGGATGACGAAGAT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGAAAGGGGTTTGGTCTaGTCAGCCTCTGTCATGCTG +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVERGLV*SASVML
Trigger: CAGCATGACAGAGGCTGACAAGACCAAACCCCTTTC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAACTTTGGAAAGGGGTTaGGTCTTGTCAGCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGTLERG*VLSASV
Trigger: GACAGAGGCTGACAAGACCAAACCCCTTTCCAAAGT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGGGCGTTTCTTGTCTTaGGGTGGAGATGTGGCACTC +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENGRFLS*GGDVAL
Trigger: GAGTGCCACATCTCCACCCAAAGACAAGAAACGCCC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGAACGCTGCATCATCTaGGCTGTCTTAGGACTTGCT +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGERCII*AVLGLA
Trigger: AGCAAGTCCTAAGACAGCCAAGATGATGCAGCGTTC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAACTTTCGTCTGCTGTaGGACTCAGAGGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVNFRLL*DSEAWG
Trigger: ACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGTGCTGAATGTGGATaGAGTTCCTGTGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASCAECG*SSCGNL
Trigger: GAGATTTCCACAGGAACTCAATCCACATTCAGCACA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTCTTGGCTCGTGCCATaGTGTTGGTTCTGCAGATCC +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVSWLVP*CWFCRS
Trigger: GGATCTGCAGAACCAACACAATGGCACGAGCCAAGA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATCTTGGCTCGTGCCATaGTGTTGGTTCTGCAGATCC +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGSWLVP*CWFCRS
Trigger: GGATCTGCAGAACCAACACAATGGCACGAGCCAAGA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGACTTTCTATTCGGGTaGGTCTTGTGCTACTCACTT +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPADFLFG*VLCYSL
Trigger: AAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTGGCTGAATTCAGTTaGGGGAGCAGTTCTTGGTCG +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLAEFS*GSSSWS
Trigger: CGACCAAGAACTGCTCCCCAAACTGAATTCAGCCAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCAGTTGTTTTGCTGCTaGTTTTTCAAGTGTGAGTCT +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAQLFCC*FFKCES
Trigger: AGACTCACACTTGAAAAACAAGCAGCAAAACAACTG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTATGGCTGCTGGCAGTaGTTTTGCTGCTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVYGCWQ*FCCLFF
Trigger: GAAAAACAAGCAGCAAAACAACTGCCAGCAGCCATA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACATCTTGAAGGAGCCTaGCCCTGGAGGAAATGCCAC +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILHLEGA*PWRKCH
Trigger: GTGGCATTTCCTCCAGGGCAAGGCTCCTTCAAGATG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTTCTGCTTCCCCACTTaGCTGACTAATGATACTCTG +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERFCFPT*LTNDTL
Trigger: CAGAGTATCATTAGTCAGCAAAGTGGGGAAGCAGAA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTGCTTCCCCACTTaGCTGACTAATGATACTCTG +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVFCFPT*LTNDTL
Trigger: CAGAGTATCATTAGTCAGCAAAGTGGGGAAGCAGAA...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCTGTTTTACAGGCTCTaGTCCATTCTGTCCCATCTT +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALFYRL*SILSHL
Trigger: AAGATGGGACAGAATGGACAAGAGCCTGTAAAACAG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTTCTGAGATCCACTTaGTCAAGCCAGATACAGGCT +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFLRST*SSQIQA
Trigger: AGCCTGTATCTGGCTTGACAAAGTGGATCTCAGAAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTCCAACATTGATGAACTaGATCACTGTGATACTGTCA +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAPTLMN*ITVILS
Trigger: TGACAGTATCACAGTGATCAAGTTCATCAATGTTGG...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCTCTCCCATGCTCATTaGAGAGCAATGTCAATGGTA +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPALSHAH*RAMSMV
Trigger: TACCATTGACATTGCTCTCAAATGAGCATGGGAGAG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTGGTCAGCTGCAAACTaGGCACACTGGCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVWSAAN*AHWQDL
Trigger: AAGATCCTGCCAGTGTGCCAAGTTTGCAGCTGACCA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGGTGAGCAGAGGATGTaGAAAACTGAAAGCAAACAG +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVGEQRM*KTESKQ
Trigger: CTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAATTTGGGGATGTTCTaGCTGTGTGCTTTGAACAGG +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFNLGMF*LCALNR
Trigger: CCTGTTCAAAGCACACAGCAAGAACATCCCCAAATT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTATTACACAGGCACTaGGAGATTCACATGCCCAAC +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLLHRH*EIHMPN
Trigger: GTTGGGCATGTGAATCTCCAAGTGCCTGTGTAATAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS TCA 90 bp AACTACAGAAAACACAGGTTCAACAGAAACCAGATCTTTGGAGGGTaGTCCCAAGGGCCAACTGGTAATTGCTTGACTAGCAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: NYRKHRFNRNQIFGG*SQGPTGNCLTSRRI
Trigger: GATTCTTCTGCTAGTCAAGCAATTACCAGTTGGCCCTTGGGATCACCCTCCAAAGATCTGGTTTCTGTTGAACCTGTGTTTTCTGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 90 bp TCAGTCTGTTCTTTGAGAGGATACCACCTTGGAGTGTTATCGAGGTaGGATGTGCTAGATAAATCAATCAATACCTCCCCAAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: SVCSLRGYHLGVLSR*DVLDKSINTSPRKS
Trigger: CGACTTCCTTGGGGAGGTATTGATTGATTTATCTAGCACATCTCACCTCGATAACACTCCAAGGTGGTATCCTCTCAAAGAACAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS GCA 90 bp CATCATGCCATGAGTGACGTCTTCCTGCATCTTCATCAATGCTTGTaGTACTTTTTCGAGTCAGTCGTCTGTGTTTCCCTGCTGTTATTT +
Preference number: 5 (lower is better)
Translates to: HHAMSDVFLHLHQCL*YFFESVVCVSLLLF
Trigger: AAATAACAGCAGGGAAACACAGACGACTGACTCGAAAAAGTAGCACAAGCATTGATGAAGATGCAGGAAGACGTCACTCATGGCATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp AAGACTTTTCTGGACATGTTTAGTCCTTCTCTTGTACTCAGCACTTaGATTCTGGACAACCATGACTTGACCTCTCCCTGGAAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: KTFLDMFSPSLVLST*ILDNHDLTSPWKKV
Trigger: TACCTTCTTCCAGGGAGAGGTCAAGTCATGGTTGTCCAGAATGCAAGTGCTGAGTACAAGAGAAGGACTAAACATGTCCAGAAAAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp AGAGATAAGTTTATTGGTGCTTCTTCCCTAGCTATAGGAAAGACCTaGTCACTTGGTATCCTGTATGGGGGCTCAGCATGCTTTGATGTT +
Preference number: 5 (lower is better)
Translates to: RDKFIGASSLAIGKT*SLGILYGGSACFDV
Trigger: AACATCAAAGCATGCTGAGCCCCCATACAGGATACCAAGTGACCAGGTCTTTCCTATAGCTAGGGAAGAAGCACCAATAAACTTATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp GTTTCAGATGCACCTGTTGTTATAAAATATGATCTAGGCATTGGCTaGCTATGGTGCATGGCAGGTAATGAAGTCACTGCATCAGCCGTA +
Preference number: 5 (lower is better)
Translates to: VSDAPVVIKYDLGIG*LWCMAGNEVTASAV
Trigger: TACGGCTGATGCAGTGACTTCATTACCTGCCATGCACCATAGCCAGCCAATGCCTAGATCATATTTTATAACAACAGGTGCATCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp AACAGGACTGAGTGGGCTTTCTTCTTCAGAATTCTGGGCCACAATTaGTATTCTTCCTCTACTTTGACTAATTGGCAAACTGGTCGGCTT +
Preference number: 5 (lower is better)
Translates to: NRTEWAFFFRILGHN*YSSSTLTNWQTGRL
Trigger: AAGCCGACCAGTTTGCCAATTAGTCAAAGTAGAGGAAGAATACCAATTGTGGCCCAGAATTCTGAAGAAGAAAGCCCACTCAGTCCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGTGCATGTGTTAAAATaGGCCTTTTCTGGAACATGC +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERVHVLK*AFSGTC
Trigger: GCATGTTCCAGAAAAGGCCAATTTTAACACATGCAC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTAGGCTCAGGTGCCTaGGAGAGATCCTGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLGSGA*ERSCFG
Trigger: ACCAAAACAGGATCTCTCCAAGGCACCTGAGCCTAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCAGCAACAGGGGCCTaGTCCTGCTCAGATGGGACA +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSATGA*SCSDGT
Trigger: TGTCCCATCTGAGCAGGACAAGGCCCCTGTTGCTGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGAAACTCTGTGAGGGTTaGGCAGAGTCTGTTTTTAGA +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERKLCEG*AESVFR
Trigger: TCTAAAAACAGACTCTGCCAAACCCTCACAGAGTTT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGCAGAGAGGACAGGTaGATTCTGGTTTGGGCGATT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVCREDR*ILVWAI
Trigger: AATCGCCCAAACCAGAATCAACCTGTCCTCTCTGCA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGGCATAGGAGATGCTTaGGGTCCTGATGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYGIGDA*GPDGAG
Trigger: ACCTGCACCATCAGGACCCAAAGCATCTCCTATGCC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTTCTTGCACTGTCTTaGGAGCCACTCTGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLLALS*EPLCLQ
Trigger: TTGAAGGCAGAGTGGCTCCAAAGACAGTGCAAGAAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGGTAAACCTTCCATCTaGGTCTGTGGTTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGGKPSI*VCGCFP
Trigger: AGGGAAACAACCACAGACCAAGATGGAAGGTTTACC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCCACCTGATCAGGTTTaGCTGTGCATGGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYPPDQV*LCMVAV
Trigger: CACAGCCACCATGCACAGCAAAACCTGATCAGGTGG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTTCCTTTTTGAGTCCCTaGAGAATATCCTTTTCATCA +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSASFLSP*RISFSS
Trigger: TGATGAAAAGGATATTCTCAAGGGACTCAAAAAGGA...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCCATCTACCGATCCATaGTACGTGTCTTCTACTAAA +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAPSTDP*YVSSTK
Trigger: TTTAGTAGAAGACACGTACAATGGATCGGTAGATGG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTTCTTCTTCTTGCCTaGTTAGCAGACTGCCATCTA +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFLLLA*LADCHL
Trigger: TAGATGGCAGTCTGCTAACAAGGCAAGAAGAAGAAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTTCTTCTTGCCTaGTTAGCAGACTGCCATCTA +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASFLLLA*LADCHL
Trigger: TAGATGGCAGTCTGCTAACAAGGCAAGAAGAAGAAA...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAAAGCTGCTCTTTCATaGGAAGGGCTATTACAGAAG +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFKAALS*EGLLQK
Trigger: CTTCTGTAATAGCCCTTCCAATGAAAGAGCAGCTTT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTGGGATTTGGAAAATCTaGGTGAAGACTTGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASGIWKI*VKTCWS
Trigger: ACTCCAACAAGTCTTCACCAAGATTTTCCAAATCCC...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCCAACTGGTAATTGCTaGACTAGCAGAAGAATCTGT +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAPTGNC*TSRRIC
Trigger: ACAGATTCTTCTGCTAGTCAAGCAATTACCAGTTGG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCCAACTGGTAATTGCTaGACTAGCAGAAGAATCTGT +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERPTGNC*TSRRIC
Trigger: ACAGATTCTTCTGCTAGTCAAGCAATTACCAGTTGG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGAAAGACCTGGTCACTaGGTATCCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENERPGH*VSCMGA
Trigger: AGCCCCCATACAGGATACCAAGTGACCAGGTCTTTC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGTGGTGGTGTCATTCTaGCTGTGGAATACTGTGGGG +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENVVVSF*LWNTVG
Trigger: CCCCACAGTATTCCACAGCAAGAATGACACCACCAC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTGCTCTGTAGTGGTTaGTGGAGAAGCAGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLLCSG*WRSSSR
Trigger: TCTGGAACTGCTTCTCCACAAACCACTACAGAGCAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTCAGTTGCCCAAAATaGACTGCCTTCCAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVFSCPK*TAFQSS
Trigger: GCTGCTCTGGAAGGCAGTCAATTTTGGGCAACTGAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGCTATGCTGGAGACTTaGGAAAGGGGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVAMLET*ERGLVL
Trigger: CAAGACCAAACCCCTTTCCAAAGTCTCCAGCATAGC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTTGGGGAGCAGTTCTaGGTCGCTCAATGCCATGCT +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENFGEQF*VAQCHA
Trigger: AGCATGGCATTGAGCGACCAAGAACTGCTCCCCAAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTGGGGTTGGTGTAGGTaGAACTTGAGGTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVWGWCR*NLRCEG
Trigger: TCCTTCACACCTCAAGTTCAACCTACACCAACCCCA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATGGGGTTGGTGTAGGTaGAACTTGAGGTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGWGWCR*NLRCEG
Trigger: TCCTTCACACCTCAAGTTCAACCTACACCAACCCCA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGAATCACTTCATAGTTaGAGGTTATCTTGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAESLHS*RLSWAP
Trigger: TGGAGCCCAAGATAACCTCAAACTATGAAGTGATTC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTGATATTGGACTGCTaGCCATGCTACTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFLILDC*PCYFFP
Trigger: AGGAAAGAAGTAGCATGGCAAGCAGTCCAATATCAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACAGGCAATGAGTGGCTaGATCCAAACTGATCCCTGG +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILQAMSG*IQTDPW
Trigger: CCAGGGATCAGTTTGGATCAAGCCACTCATTGCCTG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGAATTTGCTCTTGATGTaGACTGAGTGGTCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERNLLLM*TEWSRV
Trigger: CACTCTAGACCACTCAGTCAACATCAAGAGCAAATT...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp CTCTCTGAAGGGGAATGCTGGTGCACAAAAAGAAGCCCTGTTGTCAACTCTGCTGTTCATCTGTATAATTaGCTCTTGATGTTGACTGAG +
Preference number: 5 (lower is better)
Translates to: LSEGECWCTKRSPVVNSAVHLYN*LLMLTE
Trigger: CTCAGTCAACATCAAGAGCAAATTATACAGATGAAC...AGCAGAGTTGACAACAGGGCTTCTTTTTGTGCACCAGCATTCCCCTTCAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGGTGATTGGGAGGCTTaGTTGGTTGAATGCGGAGTT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVGDWEA*LVECGV
Trigger: AACTCCGCATTCAACCAACAAAGCCTCCCAATCACC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGTTTCTTCAATGCGTTaGAGTAGGACTGACCAAAAG +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAVSSMR*SRTDQK
Trigger: CTTTTGGTCAGTCCTACTCAAACGCATTGAAGAAAC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTACACACAACATTGCTTaGCTTCCAAACATCACAGAC +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASTHNIA*LPNITD
Trigger: GTCTGTGATGTTTGGAAGCAAAGCAATGTTGTGTGT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGAAGTTGACTGTTGGTaGCATTATCTTCTGCCTAGA +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFEVDCW*HYLLPR
Trigger: TCTAGGCAGAAGATAATGCAACCAACAGTCAACTTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTCACCTCCTTCTGGCTaGACTGGTCCATCAGACATC +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENSPPSG*TGPSDI
Trigger: GATGTCTGATGGACCAGTCAAGCCAGAAGGAGGTGA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS TCA 90 bp GTCATCACACTTGAAGTAGACTCATCCATTGTTACGACTGTTCTGTaGGACTTGGTTGTACTGAGATCCACTACTTCCCCATCAGTGATT +
Preference number: 5 (lower is better)
Translates to: VITLEVDSSIVTTVL*DLVVLRSTTSPSVI
Trigger: AATCACTGATGGGGAAGTAGTGGATCTCAGTACAACCAAGTCTCACAGAACAGTCGTAACAATGGATGAGTCTACTTCAAGTGTGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp GATTCTTTCAAGCTAATAGTGGAAGGACTCCTCCCAGGCAATTTCTaGTCTGACCTGAAAGTGTCTGTAGTTCTACTTTTACTGAGACCA +
Preference number: 5 (lower is better)
Translates to: DSFKLIVEGLLPGNF*SDLKVSVVLLLLRP
Trigger: TGGTCTCAGTAAAAGTAGAACTACAGACACTTTCAGGTCAGAGCAGAAATTGCCTGGGAGGAGTCCTTCCACTATTAGCTTGAAAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGGCATCATACTAGACTaGTGCTCTTCCTTTAAATCA +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAGIILD*CSSFKS
Trigger: TGATTTAAAGGAAGAGCACAAGTCTAGTATGATGCC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGGCATCATACTAGACTaGTGCTCTTCCTTTAAATCA +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVGIILD*CSSFKS
Trigger: TGATTTAAAGGAAGAGCACAAGTCTAGTATGATGCC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTTCACTGTCCCTGGTaGTTGAGCCAATGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVFHCPW*LSQWLC
Trigger: ACAAAGCCATTGGCTCAACAACCAGGGACAGTGAAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTACTGGTTTTGTAGATaGCTGAGCCGAGGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENYWFCR*LSRGLC
Trigger: GCAAAGCCCTCGGCTCAGCAATCTACAAAACCAGTA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTGGAGAGATCCTGTTTaGGTGCAGCATCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVWRDPV*VQHPSL
Trigger: CAAAGAAGGATGCTGCACCAAAACAGGATCTCTCCA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCCATCTTGGGCTGCTTaGGTTTATCATCAGCAACAG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVPSWAA*VYHQQQ
Trigger: CTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTACTGTACTTTGGAGCTaGGAATATCAGGTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASTVLWS*EYQVLL
Trigger: CAACAAAACCTGATATTCCAAGCTCCAAAGTACAGT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGGGTTCTTCCTTCTTTaGTACGGGGTCAACTTGTTT +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGGFFLL*YGVNLF
Trigger: AAACAAGTTGACCCCGTACAAAAGAAGGAAGAACCC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGGAGCTTGTTCAGCTTaGGGCTCTAATTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGGACSA*GSNFSA
Trigger: AGCTGAAAAATTAGAGCCCAAAGCTGAACAAGCTCC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGCGATTTCTCCAGTTTaGTGGGAAGGACAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVAISPV*WEGQPF
Trigger: AAAAGGCTGTCCTTCCCACAAAACTGGAGAAATCGC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCATTCAGTGCAAGTATaGAAGTTAGGAGGATCCTTA +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVHSVQV*KLGGSL
Trigger: TAAGGATCCTCCTAACTTCAATACTTGCACTGAATG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTACAGAGATTACACACTaGATTCTTGCATTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFTEITH*ILAFSA
Trigger: TGCACTGAATGCAAGAATCAAGTGTGTAATCTCTGT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCAAGCTGTCCTGATATaGCTCTCTGGGTTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVQAVLI*LSGFGN
Trigger: ATTGCCAAACCCAGAGAGCAATATCAGGACAGCTTG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACAAGCTGTCCTGATATaGCTCTCTGGGTTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGQAVLI*LSGFGN
Trigger: ATTGCCAAACCCAGAGAGCAATATCAGGACAGCTTG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTACTCTCTTCTTGTTTTaGATCTGTGGTTACCATAGG +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASTLFLF*ICGYHR
Trigger: CCTATGGTAACCACAGATCAAAAACAAGAAGAGAGT...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCATCTTGGTCTGTGGTaGTTTCCCTTCTTGCACTGT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVHLGLW*FPFLHC
Trigger: ACAGTGCAAGAAGGGAAACAACCACAGACCAAGATG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTGAAAAAGAGTCCTTTTaGAGTCCCTTGAGAATATCC +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAEKESF*SPLRIS
Trigger: GGATATTCTCAAGGGACTCAAAAAGGACTCTTTTTC...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTGAAAAAGAGTCCTTTTaGAGTCCCTTGAGAATATCC +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVEKESF*SPLRIS
Trigger: GGATATTCTCAAGGGACTCAAAAAGGACTCTTTTTC...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTCTCTTTATGGTCCTaGCTGGAAGGAATATCTTGT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFFSLWS*LEGISC
Trigger: ACAAGATATTCCTTCCAGCAAGGACCATAAAGAGAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCATCTTCATCAATGCTaGTGCTACTTTTTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAHLHQC*CYFFES
Trigger: TGACTCGAAAAAGTAGCACAAGCATTGATGAAGATG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCATCTTCATCAATGCTaGTGCTACTTTTTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVHLHQC*CYFFES
Trigger: TGACTCGAAAAAGTAGCACAAGCATTGATGAAGATG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTCCTGAGAGAACACTaGATGTCAAAGAGGCATCTG +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLLREH*MSKRHL
Trigger: CAGATGCCTCTTTGACATCAAGTGTTCTCTCAGGAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCGGATAAGCTACTTTTaGTTCGTTCGGCCTCCAACT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVRISYF*FVRPPT
Trigger: AGTTGGAGGCCGAACGAACAAAAAGTAGCTTATCCG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAATCTTGGTGAAGACTaGTTGGAGTGTGGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGNLGED*LECGES
Trigger: ACTTTCCCCACACTCCAACAAGTCTTCACCAAGATT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCTGAAAGAGAAGGTGTaGCTTCATAGACTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVLKEKV*LHRLQL
Trigger: GAGCTGCAGTCTATGAAGCAACACCTTCTCTTTCAG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTGCCGCTCTTCTTCTaGCTGAAAGAGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLPLFF*LKEKVL
Trigger: CAACACCTTCTCTTTCAGCAAGAAGAAGAGCGGCAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAATCTTCGTCATCCGTTaGTACACCACTGTCCACTAT +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGIFVIR*YTTVHY
Trigger: ATAGTGGACAGTGGTGTACAAACGGATGACGAAGAT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAACTTTGGAAAGGGGTTaGGTCTTGTCAGCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILTLERG*VLSASV
Trigger: GACAGAGGCTGACAAGACCAAACCCCTTTCCAAAGT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTATCTCTGCTACCGTTaGAACTGCTATGCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVYLCYR*NCYAGD
Trigger: GTCTCCAGCATAGCAGTTCAAACGGTAGCAGAGATA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGAACGCTGCATCATCTaGGCTGTCTTAGGACTTGCT +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILERCII*AVLGLA
Trigger: AGCAAGTCCTAAGACAGCCAAGATGATGCAGCGTTC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAACTTTCGTCTGCTGTaGGACTCAGAGGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYNFRLL*DSEAWG
Trigger: ACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAGAGGATGTCATGGTTaGAGAACCTTTAGTCGTATA +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFRGCHG*RTFSRI
Trigger: TATACGACTAAAGGTTCTCAAACCATGACATCCTCT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGCTCGTGCCATTGTGTaGGTTCTGCAGATCCTTCTC +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYARAIV*VLQILL
Trigger: GAGAAGGATCTGCAGAACCAACACAATGGCACGAGC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAATGTCCTGGAGAATCTaGGCTCGTGCCATTGTGTTG +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILMSWRI*ARAIVL
Trigger: CAACACAATGGCACGAGCCAAGATTCTCCAGGACAT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTTCATCAAGCTCTGCTaGTTTCTTTCGAAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAFIKLC*FLSKFC
Trigger: GCAAAACTTCGAAAGAAACAAGCAGAGCTTGATGAA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTATTCGGGTTGGTCTaGTGCTACTCACTTCACTGT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLFGLV*CYSLHC
Trigger: ACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGACAGATATGCTTGATATaGGACTGCTTGCCATGCTAC +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGQICLI*DCLPCY
Trigger: GTAGCATGGCAAGCAGTCCAATATCAAGCATATCTG...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAAATGCCGCTGTTCCTTaGGTGATCTCTCCAATGTCG +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILNAAVP*VISPMS
Trigger: CGACATTGGAGAGATCACCAAAGGAACAGCGGCATT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTCAGTTGTTTTGCTGCTaGTTTTTCAAGTGTGAGTCT +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVQLFCC*FFKCES
Trigger: AGACTCACACTTGAAAAACAAGCAGCAAAACAACTG...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTCTGCTTCCCCACTTaGCTGACTAATGATACTCTG +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGFCFPT*LTNDTL
Trigger: CAGAGTATCATTAGTCAGCAAAGTGGGGAAGCAGAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCCTTATCCACAGCTTTaGGTGGCTCATGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVPYPQL*VAHEVP
Trigger: TGGAACTTCATGAGCCACCAAAAGCTGTGGATAAGG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGTCCAGTGTTTTCTTCTaGAGCTGTTCCATGGAAATA +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERSSVFF*SCSMEI
Trigger: TATTTCCATGGAACAGCTCAAGAAGAAAACACTGGA...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGCTTCTGATGATGATTTaGAGCTACCAGGACTACTAT +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERLLMMI*SYQDYY
Trigger: ATAGTAGTCCTGGTAGCTCAAAATCATCATCAGAAG...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp AAATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTCTTCTGATGATGATTTaGAGCTACCAGGACTACTAT +
Preference number: 5 (lower is better)
Translates to: KCYEPGWMDGGNKGETASLLMMI*SYQDYY
Trigger: ATAGTAGTCCTGGTAGCTCAAAATCATCATCAGAAG...ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTATTTGCGTCTTTTACTaGGTTGAATGCGGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVICVFY*VECGVV
Trigger: AACAACTCCGCATTCAACCAAGTAAAAGACGCAAAT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTATTTGCGTCTTTTACTaGGTTGAATGCGGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFICVFY*VECGVV
Trigger: AACAACTCCGCATTCAACCAAGTAAAAGACGCAAAT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGAATCTGATAGCATATaGAGGTCCACATATTTCTGC +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQERESDSI*RSTYFC
Trigger: GCAGAAATATGTGGACCTCAATATGCTATCAGATTC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618073.1
CDS TCA 90 bp TCAGGACTTTCATCAAATGCTTCATCGTCTTCATCATGCCATGAGTaGCGTCTTCCTGCATCTTCATCAATGCTTGTGCTACTTTTTCGA +
Preference number: 5 (lower is better)
Translates to: SGLSSNASSSSSCHE*RLPASSSMLVLLFR
Trigger: TCGAAAAAGTAGCACAAGCATTGATGAAGATGCAGGAAGACGTCACTCATGGCATGATGAAGACGATGAAGCATTTGATGAAAGTCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp TTAATTTTCTCCAGTTCCAGGAGCTCACGCTCCAAGTCTAGCTGCTaGTGTTGTTTATCTTCTTCAGGGACAATTAAAAGAGCACTTTCA +
Preference number: 5 (lower is better)
Translates to: LIFSSSRSSRSKSSC*CCLSSSGTIKRALS
Trigger: TGAAAGTGCTCTTTTAATTGTCCCTGAAGAAGATAAACAACAGCAGCAGCTAGACTTGGAGCGTGAGCTCCTGGAACTGGAGAAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp GACAGTGGTTTGACACTCAGTGCATGTGTTAAAATTGGCCTTTTCTaGAACATGCAACAGAAGTTCAGTGGTATTGCAAAGAGGACAGAT +
Preference number: 5 (lower is better)
Translates to: DSGLTLSACVKIGLF*NMQQKFSGIAKRTD
Trigger: ATCTGTCCTCTTTGCAATACCACTGAACTTCTGTTGCATGTTCCAGAAAAGGCCAATTTTAACACATGCACTGAGTGTCAAACCACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp TCTTCCTTCTTCTGGCTCTCAGTACTGCTACTAATCTCTTTGAGCTaGTTTCTGATGAACTCATCATCTTCAGAACCTGAAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: SSFFWLSVLLLISLS*FLMNSSSSEPEASS
Trigger: TGAAGATGCTTCAGGTTCTGAAGATGATGAGTTCATCAGAAACCAGCTCAAAGAGATTAGTAGCAGTACTGAGAGCCAGAAGAAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp CCAACTGGTAATTGCTTGACTAGCAGAAGAATCTGTTGGAGTCCCTaGTTCAGATGGCAATGTAATAACTACATAAGTTTCTGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: PTGNCLTSRRICWSP*FRWQCNNYISFCEG
Trigger: TCCCTCACAGAAACTTATGTAGTTATTACATTGCCATCTGAACCAGGGACTCCAACAGATTCTTCTGCTAGTCAAGCAATTACCAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTACTATCCAACTCTaGTTTCCTGTGCATGGAAGG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTTIQL*FPVHGR
Trigger: CCTTCCATGCACAGGAAACAAGAGTTGGATAGTAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAACCACTTTTTGTTTCTaGGTGGTTTCTTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGTTFCF*VVSSWD
Trigger: ATCCCAGGAAGAAACCACCAAGAAACAAAAAGTGGT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTCCTTCAGGTTTTCCTaGCTCCTTCTGAACCACTTT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVSFRFS*LLLNHF
Trigger: AAAGTGGTTCAGAAGGAGCAAGGAAAACCTGAAGGA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCCTGGATGCATCTCGTaGAAGTGGCAATTTTGCATG +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENPGCIS*KWQFCM
Trigger: CATGCAAAATTGCCACTTCAACGAGATGCATCCAGG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTTCACTGTCCCTGGTaGTTGAGCCAATGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENFHCPW*LSQWLC
Trigger: ACAAAGCCATTGGCTCAACAACCAGGGACAGTGAAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTACAGACAGTGGTTaGACACTCAGTGCATGTGTT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTTDSG*TLSACV
Trigger: AACACATGCACTGAGTGTCAAACCACTGTCTGTAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGAGAGCCATGAAGGGTaGGTTGTTTCACTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYESHEG*VVSLVV
Trigger: CACCACTAGTGAAACAACCAACCCTTCATGGCTCTC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTTGGCTTTACCATCTaGGGCTGCTTTGGTTTATCA +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVGFTI*GCFGLS
Trigger: TGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGCTTGTGACTGTACTTaGGAGCTTGGAATATCAGGT +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGACDCT*ELGISG
Trigger: ACCTGATATTCCAAGCTCCAAAGTACAGTCACAAGC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAGGGTTCTTCCTTCTTTaGTACGGGGTCAACTTGTTT +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGGFFLL*YGVNLF
Trigger: AAACAAGTTGACCCCGTACAAAAGAAGGAAGAACCC...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGTTGTAGGCTGTGATTaGGGGGCATCAGTAATACTT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVVVGCD*GASVIL
Trigger: AAGTATTACTGATGCCCCCAAATCACAGCCTACAAC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTTCAGCTGTTAAAGATTaGCTATCCTTAATAGGTGGT +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPASAVKD*LSLIGG
Trigger: ACCACCTATTAAGGATAGCAAATCTTTAACAGCTGA...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCAGGTTGATTCTGGTTaGGGCGATTTCTCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVQVDSG*GDFSSF
Trigger: AAAACTGGAGAAATCGCCCAAACCAGAATCAACCTG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACAGGTTGATTCTGGTTaGGGCGATTTCTCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGQVDSG*GDFSSF
Trigger: AAAACTGGAGAAATCGCCCAAACCAGAATCAACCTG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACATCTTGGTCTGTGGTaGTTTCCCTTCTTGCACTGT +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILHLGLW*FPFLHC
Trigger: ACAGTGCAAGAAGGGAAACAACCACAGACCAAGATG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGGTAAACCTTCCATCTaGGTCTGTGGTTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENGKPSI*VCGCFP
Trigger: AGGGAAACAACCACAGACCAAGATGGAAGGTTTACC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATAAGATCCCTCTCCCCTaGACCTATCTTCAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYKIPLP*TYLQVS
Trigger: ACTCACCTGAAGATAGGTCAAGGGGAGAGGGATCTT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACTCCTGAGAGAACACTaGATGTCAAAGAGGCATCTG +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILLLREH*MSKRHL
Trigger: CAGATGCCTCTTTGACATCAAGTGTTCTCTCAGGAG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTACGGATAAGCTACTTTTaGTTCGTTCGGCCTCCAACT +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILRISYF*FVRPPT
Trigger: AGTTGGAGGCCGAACGAACAAAAAGTAGCTTATCCG...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTTGGTGAAGACTTGTaGGAGTGTGGGGAAAGTGGG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLGEDL*ECGESG
Trigger: CCCACTTTCCCCACACTCCAACAAGTCTTCACCAAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTGCTGAAACCTCAGTCTaGGAAACTTCAGTAGTGAGA +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVAETSV*ETSVVR
Trigger: TCTCACTACTGAAGTTTCCAAGACTGAGGTTTCAGC...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGGAGTGGTGTTGTCATaGCATGTTCTGCACCCACTA +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYGVVLS*HVLHPL
Trigger: TAGTGGGTGCAGAACATGCAATGACAACACCACTCC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGAAAGACCTGGTCACTaGGTATCCTGTATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLERPGH*VSCMGA
Trigger: AGCCCCCATACAGGATACCAAGTGACCAGGTCTTTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAACCATGATCTTTTCTaGTTCTCGGAACCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: CYEPGWMDGGNKGETASFNHDLF*FSEPLN
Trigger: ATTCAAAGGTTCCGAGAACAAGAAAAGATCATGGTT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AATGCTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTACTTCTCTTTTTGGGTaGTTTTTCCTCTTTCACAAC +
Preference number: 5 (lower is better)
Translates to: NAMSQVGWMVETKEKQPVTSLFG*FFLFHN
Trigger: GTTGTGAAAGAGGAAAAACAACCCAAAAAGAGAAGT...AACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGCTATGCTGGAGACTTaGGAAAGGGGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYAMLET*ERGLVL
Trigger: CAAGACCAAACCCCTTTCCAAAGTCTCCAGCATAGC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTAATTATTTCTACCTaGGCATCCACTCGTGCCCGT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLIIST*ASTRAR
Trigger: ACGGGCACGAGTGGATGCCAAGGTAGAAATAATTAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCAATCTCTAAAGGTGTaGGGCGTTTCTTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVQSLKV*GVSCLW
Trigger: CCAAAGACAAGAAACGCCCAACACCTTTAGAGATTG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTTGGGGAGCAGTTCTaGGTCGCTCAATGCCATGCT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLFGEQF*VAQCHA
Trigger: AGCATGGCATTGAGCGACCAAGAACTGCTCCCCAAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATTGTGTGTAAGGACTaGTCGGAGGAACTAGTTGAG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVIVCKD*SEELVE
Trigger: CTCAACTAGTTCCTCCGACAAGTCCTTACACACAAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTGGTGTAGGTTGAACTaGAGGTGTGAAGGACATTGT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVWCRLN*RCEGHC
Trigger: ACAATGTCCTTCACACCTCAAGTTCAACCTACACCA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGATTGATATTGGACTGCTaGCCATGCTACTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGLILDC*PCYFFP
Trigger: AGGAAAGAAGTAGCATGGCAAGCAGTCCAATATCAA...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGGAGACGGTCTGTTTTaGACAGATCCTTTTCATGAA +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGGDGLF*TDPFHE
Trigger: TTCATGAAAAGGATCTGTCAAAAACAGACCGTCTCC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAAATTTGCTCTTGATGTaGACTGAGTGGTCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGNLLLM*TEWSRV
Trigger: CACTCTAGACCACTCAGTCAACATCAAGAGCAAATT...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTCCATTCCATTCCAATACTTGCATCCTCCAAGGAAACTTTATCTTCAGATGGGTTCTGCTTCCCCACTTaGCTGACTAATGATACTCTG +
Preference number: 5 (lower is better)
Translates to: FHSIPILASSKETLSSDGFCFPT*LTNDTL
Trigger: CAGAGTATCATTAGTCAGCAAAGTGGGGAAGCAGAA...CCCATCTGAAGATAAAGTTTCCTTGGAGGATGCAAGTATTGGAATGGAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGGAGGCTTTGTTGGTaGAATGCGGAGTTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGRLCW*NAELLH
Trigger: GTGCAACAACTCCGCATTCAACCAACAAAGCCTCCC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTCATAAAGAATTACCTTaGTGCTGCATGAAAACCACA +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPAHKELP*CCMKTT
Trigger: TGTGGTTTTCATGCAGCACAAAGGTAATTCTTTATG...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GTGACACAGTCAGTGGTAGAACTAAGACCAGAAGACAGGCTTTTATTCCCTGCTAGCAATATAATGTCTTaGATGATTCCACTCTCCCAT +
Preference number: 5 (lower is better)
Translates to: VTQSVVELRPEDRLLFPASNIMS*MIPLSH
Trigger: ATGGGAGAGTGGAATCATCAAAGACATTATATTGCT...AGCAGGGAATAAAAGCCTGTCTTCTGGTCTTAGTTCTACCACTGACTGTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGCAAAAAGAAGCCCTGTaGTCAACTCTGCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVQKEAL*STLLID
Trigger: GTCAATCAGCAGAGTTGACAACAGGGCTTCTTTTTG...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GACAGAGAACAGGGTGAGCAGAGGATGTTGAAAACTGAAAGCAAACAGGAAAGGGAAGACTACAATTTTTaGCACATGGAAAGCTACCAT +
Preference number: 5 (lower is better)
Translates to: DREQGEQRMLKTESKQEREDYNF*HMESYH
Trigger: ATGGTAGCTTTCCATGTGCAAAAAATTGTAGTCTTC...CCTTTCCTGTTTGCTTTCAGTTTTCAACATCCTCTGCTCACCCTGTTCTCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS TCA 90 bp AAGTTCAGGACTTTCATCAAATGCTTCATCGTCTTCATCATGCCATaGGTGACGTCTTCCTGCATCTTCATCAATGCTTGTGCTACTTTT +
Preference number: 5 (lower is better)
Translates to: KFRTFIKCFIVFIMP*VTSSCIFINACATF
Trigger: AAAAGTAGCACAAGCATTGATGAAGATGCAGGAAGACGTCACTCATGGCATGATGAAGACGATGAAGCATTTGATGAAAGTCCTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp AAAGCGTTAACCTCTGAGAGGAAGCCAGGCATCATACTAGACTTGTaGTCTTCCTTTAAATCAGTTCTGGACTTTGATTCTTTCAAGCTA +
Preference number: 5 (lower is better)
Translates to: KALTSERKPGIILDL*SSFKSVLDFDSFKL
Trigger: TAGCTTGAAAGAATCAAAGTCCAGAACTGATTTAAAGGAAGAGCACAAGTCTAGTATGATGCCTGGCTTCCTCTCAGAGGTTAACGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp ACAGAGTCTATCGTCTCAGCAGTAAGAGACTCCATAGTAATAGTTTaGAAACTGGCACTGATATCAATACCAGTTACTGCAATGTCCGTT +
Preference number: 5 (lower is better)
Translates to: TESIVSAVRDSIVIV*KLALISIPVTAMSV
Trigger: AACGGACATTGCAGTAACTGGTATTGATATCAGTGCCAGTTTGCAAACTATTACTATGGAGTCTCTTACTGCTGAGACGATAGACTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp TTCCATTCCAATACTTGCATCCTCCAAGGAAACTTTATCTTCAGATaGGCCTTAGGTTTATTTCAACAATCCCAGGCTTCCATAAGCTTC +
Preference number: 5 (lower is better)
Translates to: FHSNTCILQGNFIFR*ALGLFQQSQASISF
Trigger: GAAGCTTATGGAAGCCTGGGATTGTTGAAATAAACCTAAGGCCCATCTGAAGATAAAGTTTCCTTGGAGGATGCAAGTATTGGAATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGTCTTCCTGATTGCTTaGGAGGATGACTACTATCCA +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENVFLIA*EDDYYP
Trigger: TGGATAGTAGTCATCCTCCAAAGCAATCAGGAAGAC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATACTGGTTTTGTAGATaGCTGAGCCGAGGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLYWFCR*LSRGLC
Trigger: GCAAAGCCCTCGGCTCAGCAATCTACAAAACCAGTA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAGAAGTTCAGTGGTATaGCAAAGAGGACAGATGGTT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVRSSVV*QRGQMV
Trigger: AACCATCTGTCCTCTTTGCAATACCACTGAACTTCT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGAGAGCCATGAAGGGTaGGTTGTTTCACTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLESHEG*VVSLVV
Trigger: CACCACTAGTGAAACAACCAACCCTTCATGGCTCTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTAAACTCTGTGAGGGTTaGGCAGAGTCTGTTTTTAGA +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVKLCEG*AESVFR
Trigger: TCTAAAAACAGACTCTGCCAAACCCTCACAGAGTTT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCTTTTGGCATTGGCTaGGCATCTGGTTTAGGACTC +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPFGIG*ASGLGL
Trigger: GAGTCCTAAACCAGATGCCAAGCCAATGCCAAAAGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTATGTTGAGTTCAGTTTaGCAGAGAGGACAGGTTGAT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVMLSSV*QRGQVD
Trigger: ATCAACCTGTCCTCTCTGCAAAACTGAACTCAACAT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTGGGGCTGATGTTTTaGCCTCTGGGAGTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLGLMF*PLGVAF
Trigger: AAAAGCTACTCCCAGAGGCAAAAACATCAGCCCCAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAACTCTGAGTTTTCTCTaGGTCTTTAGGCTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILTLSFL*VFRLFR
Trigger: CCTGAACAGCCTAAAGACCAAGAGAAAACTCAGAGT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTGCTACTAATCTCTTaGAGCTGGTTTCTGATGAAC +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLLLIS*SWFLMN
Trigger: GTTCATCAGAAACCAGCTCAAAGAGATTAGTAGCAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTGCTACTAATCTCTTaGAGCTGGTTTCTGATGAAC +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLLLIS*SWFLMN
Trigger: GTTCATCAGAAACCAGCTCAAAGAGATTAGTAGCAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAAGATCCCTCTCCCCTaGACCTATCTTCAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLKIPLP*TYLQVS
Trigger: ACTCACCTGAAGATAGGTCAAGGGGAGAGGGATCTT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACCATCTACCGATCCATaGTACGTGTCTTCTACTAAA +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGPSTDP*YVSSTK
Trigger: TTTAGTAGAAGACACGTACAATGGATCGGTAGATGG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATTAAAGATAGGCCTGTaGGTTTGGGGTGTATATCTG +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLKIGL*VWGVYL
Trigger: CAGATATACACCCCAAACCAACAGGCCTATCTTTAA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTTTCTGTGAGGGATTaGGAAAATCTTGGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVSVRD*ENLGED
Trigger: GTCTTCACCAAGATTTTCCAAATCCCTCACAGAAAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGAGTGGTGTTGTCATaGCATGTTCTGCACCCACTA +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGVVLS*HVLHPL
Trigger: TAGTGGGTGCAGAACATGCAATGACAACACCACTCC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTATCTCTGCTACCGTTaGAACTGCTATGCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYYLCYR*NCYAGD
Trigger: GTCTCCAGCATAGCAGTTCAAACGGTAGCAGAGATA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTTAATTATTTCTACCTaGGCATCCACTCGTGCCCGT +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLIIST*ASTRAR
Trigger: ACGGGCACGAGTGGATGCCAAGGTAGAAATAATTAA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGTTTCTTTCGAAGTTTaGCAGACTCCCTTTCCACAA +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVVSFEV*QTPFPQ
Trigger: TTGTGGAAAGGGAGTCTGCAAAACTTCGAAAGAAAC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTATTCGGGTTGGTCTaGTGCTACTCACTTCACTGT +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLFGLV*CYSLHC
Trigger: ACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTGGTGTAGGTTGAACTaGAGGTGTGAAGGACATTGT +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENWCRLN*RCEGHC
Trigger: ACAATGTCCTTCACACCTCAAGTTCAACCTACACCA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGGGACTGACCAAAAGTTaGTGCCAGTTGACTATTCTT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVGLTKS*CQLTIL
Trigger: AAGAATAGTCAACTGGCACAAACTTTTGGTCAGTCC...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TGGTCATACAAACTCTCATGCATACCTATGGATATGAGTGGCTGCAAAAGAGGAGATGACTCAATGAAATaGTGGGAAAAACTGAGATGC +
Preference number: 5 (lower is better)
Translates to: WSYKLSCIPMDMSGCKRGDDSMK*WEKLRC
Trigger: GCATCTCAGTTTTTCCCACAATTTCATTGAGTCATC...TCCTCTTTTGCAGCCACTCATATCCATAGGTATGCATGAGAGTTTGTATGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS TCA 90 bp GATTCTATGATAGAAGATGCCATATCAGATAAGGAAATAACAATATaGTCAGCACTAGCTCTACCATCTGGTGGGGCAGTCCGATCTAAA +
Preference number: 5 (lower is better)
Translates to: DSMIEDAISDKEITI*SALALPSGGAVRSK
Trigger: TTTAGATCGGACTGCCCCACCAGATGGTAGAGCTAGTGCTGATCATATTGTTATTTCCTTATCTGATATGGCATCTTCTATCATAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGCTTAGGAATCGGCTaGGGTGGCTGTTGTTGTAAA +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCLGIG*GGCCCK
Trigger: TTTACAACAACAGCCACCCAAGCCGATTCCTAAGCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGTTGTTGAGAAGATATaGATTTGGGAGTGCCATCCT +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENVVEKI*IWECHP
Trigger: AGGATGGCACTCCCAAATCAATATCTTCTCAACAAC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACCTGGATGCATCTCGTaGAAGTGGCAATTTTGCATG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLPGCIS*KWQFCM
Trigger: CATGCAAAATTGCCACTTCAACGAGATGCATCCAGG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTTTCCAGATCCTGTTaGGCTTACTGGTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVFSRSC*AYWFCR
Trigger: TCTACAAAACCAGTAAGCCAAACAGGATCTGGAAAA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGTTGGCTTTACCATCTaGGGCTGCTTTGGTTTATCA +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYVGFTI*GCFGLS
Trigger: TGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAAC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAATACAAGGTCAGTGGTaGGCTTTACCATCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLIQGQW*ALPSWA
Trigger: AGCCCAAGATGGTAAAGCCAACCACTGACCTTGTAT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTGTACTTTGGAGCTaGGAATATCAGGTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTVLWS*EYQVLL
Trigger: CAACAAAACCTGATATTCCAAGCTCCAAAGTACAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAATGTTGAGTTCAGTTTaGCAGAGAGGACAGGTTGAT +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILMLSSV*QRGQVD
Trigger: ATCAACCTGTCCTCTCTGCAAAACTGAACTCAACAT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTCCTTAGAACCTATGTaGAGTTCAGTTTTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVSLEPM*SSVLQR
Trigger: TCTCTGCAAAACTGAACTCAACATAGGTTCTAAGGA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGACAGAGATTACACACTaGATTCTTGCATTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVTEITH*ILAFSA
Trigger: TGCACTGAATGCAAGAATCAAGTGTGTAATCTCTGT...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTCTCTTCTTGTTTTaGATCTGTGGTTACCATAGG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTLFLF*ICGYHR
Trigger: CCTATGGTAACCACAGATCAAAAACAAGAAGAGAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCTGGGAGTAGCTTTTaGTCTTCAGGGGTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSGSSF*SSGVGF
Trigger: AAAGCCAACCCCTGAAGACAAAAAGCTACTCCCAGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTTGAGGTGTCTGATTaGTCATCTTCCTTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLEVSD*SSSFSV
Trigger: AACAGAAAAGGAAGATGACAAATCAGACACCTCAAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGACTTGAGGTGTCTGATTaGTCATCTTCCTTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGLEVSD*SSSFSV
Trigger: AACAGAAAAGGAAGATGACAAATCAGACACCTCAAG...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTTCACCAAGTGAGCTaGATATTCCATCGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVFHQVS*IFHRKN
Trigger: ATTCTTCCGATGGAATATCAAGCTCACTTGGTGAAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGATTTCACCAAGTGAGCTaGATATTCCATCGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGFHQVS*IFHRKN
Trigger: ATTCTTCCGATGGAATATCAAGCTCACTTGGTGAAA...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTTCTCTTTATGGTCCTaGCTGGAAGGAATATCTTGT +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVFSLWS*LEGISC
Trigger: ACAAGATATTCCTTCCAGCAAGGACCATAAAGAGAA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTCCATAGTAATAGTTaGCAAACTGGCACTGATATC +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLHSNS*QTGTDI
Trigger: GATATCAGTGCCAGTTTGCAAACTATTACTATGGAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTCAGCAAAGCGCTGTaGCTTAATTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLSKAL*LNFLQF
Trigger: GAACTGGAGAAAATTAAGCAACAGCGCTTTGCTGAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATGTACCATCCTTGGCTTaGTGGTATTTCAATTGCCAC +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYVPSLA*WYFNCH
Trigger: GTGGCAATTGAAATACCACAAAGCCAAGGATGGTAC...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATGTTTCTTTCGAAGTTTaGCAGACTCCCTTTCCACAA +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENVSFEV*QTPFPQ
Trigger: TTGTGGAAAGGGAGTCTGCAAAACTTCGAAAGAAAC...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATAGATTCTGTTTGGGTTaGTGGTGGTATAAACTGGCT +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENRFCLG*WWYKLA
Trigger: AGCCAGTTTATACCACCACAAACCCAAACAGAATCT...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATATTGTGTGTAAGGACTaGTCGGAGGAACTAGTTGAG +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYIVCKD*SEELVE
Trigger: CTCAACTAGTTCCTCCGACAAGTCCTTACACACAAT...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGAAGAGTACTGGTATaGTGTGTAAGGACTTGTCGG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGRVLV*CVRTCR
Trigger: CCGACAAGTCCTTACACACAATACCAGTACTCTTCC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGGAGACGGTCTGTTTTaGACAGATCCTTTTCATGAA +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILGDGLF*TDPFHE
Trigger: TTCATGAAAAGGATCTGTCAAAAACAGACCGTCTCC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp AGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTTCAGTATGTGTCCAGTGTTTTCTTCTaGAGCTGTTCCATGGAAATA +
Preference number: 5 (lower is better)
Translates to: SHGKFKVSELHSSCFQYVSSVFF*SCSMEI
Trigger: TATTTCCATGGAACAGCTCAAGAAGAAAACACTGGA...CACATACTGAAAACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTTCTGATGATGATTTaGAGCTACCAGGACTACTAT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLLMMI*SYQDYY
Trigger: ATAGTAGTCCTGGTAGCTCAAAATCATCATCAGAAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGATTGGGAGGCTTTGTaGGTTGAATGCGGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLDWEAL*VECGVV
Trigger: AACAACTCCGCATTCAACCAACAAAGCCTCCCAATC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS TCA 90 bp TCAGTCAAATGTGGTGTAGGGTTAAATCCACAGAGATTACACACTTaGTTCTTGCATTCAGTGCAAGTATTGAAGTTAGGAGGATCCTTA +
Preference number: 5 (lower is better)
Translates to: SVKCGVGLNPQRLHT*FLHSVQVLKLGGSL
Trigger: TAAGGATCCTCCTAACTTCAATACTTGCACTGAATGCAAGAATCAAGTGTGTAATCTCTGTGGATTTAACCCTACACCACATTTGACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS TCA 90 bp TCTTTTATTGTTTTGGTTGTCTTATCATCTTCTTTAGGTAAACTCTaGGGTGTGCCAGATGGTAAACCTTCCATCTTGGTCTGTGGTTGT +
Preference number: 5 (lower is better)
Translates to: SFIVLVVLSSSLGKL*GVPDGKPSILVCGC
Trigger: ACAACCACAGACCAAGATGGAAGGTTTACCATCTGGCACACCTCAGAGTTTACCTAAAGAAGATGATAAGACAACCAAAACAATAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 90 bp AATAGAGGGTTGGACAGCACTAATTTGTTTCCCATAAACTTCATTTaGTGTGATCTGCCTTTTCACATCCATTGTAGAAGCAGAAAGATC +
Preference number: 5 (lower is better)
Translates to: NRGLDSTNLFPINFI*CDLPFHIHCRSRKI
Trigger: GATCTTTCTGCTTCTACAATGGATGTGAAAAGGCAGATCACAGCAAATGAAGTTTATGGGAAACAAATTAGTGCTGTCCAACCCTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTTTCCAGGAGTTGGTaGCTGAATAGGTGGTTTGGA +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLFSRSW*LNRWFG
Trigger: TCCAAACCACCTATTCAGCAACCAACTCCTGGAAAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGCTTGTGACTGTACTTaGGAGCTTGGAATATCAGGT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLACDCT*ELGISG
Trigger: ACCTGATATTCCAAGCTCCAAAGTACAGTCACAAGC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATCCTTAGAACCTATGTaGAGTTCAGTTTTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILSLEPM*SSVLQR
Trigger: TCTCTGCAAAACTGAACTCAACATAGGTTCTAAGGA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAACTCTGAGTTTTCTCTaGGTCTTTAGGCTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLTLSFL*VFRLFR
Trigger: CCTGAACAGCCTAAAGACCAAGAGAAAACTCAGAGT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTAGAACTCTTTCTTaGTTGCTGTTCTATTTCCCT +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTRTLS*LLFYFP
Trigger: AGGGAAATAGAACAGCAACAAAGAAAGAGTTCTAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTCACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAACTAGAACTCTTTCTTaGTTGCTGTTCTATTTCCCT +
Preference number: 5 (lower is better)
Translates to: IHMPNTSDTLNNYGNTSGTRTLS*LLFYFP
Trigger: AGGGAAATAGAACAGCAACAAAGAAAGAGTTCTAGT...TCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTTATATCTGTTGGTTTTaGTGTAGTTGTTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVYICWF*CSCWKL
Trigger: CAGCTTCCAACAACTACACAAAAACCAACAGATATA...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGAAAATGGAGCCAGGTaGTGTGGTGATAGCAAATGT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLENGAR*CGDSKC
Trigger: ACATTTGCTATCACCACACAACCTGGCTCCATTTTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTCAGCAAAGCGCTGTaGCTTAATTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLSKAL*LNFLQF
Trigger: GAACTGGAGAAAATTAAGCAACAGCGCTTTGCTGAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTGTTCTCGGAACCTTaGAATTTCCTGACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLFSEP*NFLTFP
Trigger: TGGGAACGTCAGGAAATTCAAAGGTTCCGAGAACAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGGTTGCATCTTCAGTaGCCCAAAATTGACTGCCTT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLWLHLQ*PKIDCL
Trigger: AAGGCAGTCAATTTTGGGCAACTGAAGATGCAACCA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTACTTCTCTTTTTGGGTaGTTTTTCCTCTTTCACAAC +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVTSLFG*FFLFHN
Trigger: GTTGTGAAAGAGGAAAAACAACCCAAAAAGAGAAGT...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATTCATCAAGCTCTGCTaGTTTCTTTCGAAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILFIKLC*FLSKFC
Trigger: GCAAAACTTCGAAAGAAACAAGCAGAGCTTGATGAA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATCTGATGGTACAAAGTTaGTTGCTCAAAATGAGACTG +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENLMVQS*LLKMRL
Trigger: CAGTCTCATTTTGAGCAACAAACTTTGTACCATCAG...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp TTTCTCTTCACAGCCATGGGAAATTCAAGGTCTCAGAACTCCATTCTTCTTGTTCTCAAGTCTAAACTATaGTACTTACTACCAAGATGG +
Preference number: 5 (lower is better)
Translates to: FLFTAMGNSRSQNSILLVLKSKL*YLLPRW
Trigger: CCATCTTGGTAGTAAGTACAATAGTTTAGACTTGAG...AACAAGAAGAATGGAGTTCTGAGACCTTGAATTTCCCATGGCTGTGAAGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGAATCTGATAGCATATaGAGGTCCAGTCTTACACAT +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILESDSI*RSSLTH
Trigger: ATGTGTAAGACTGGACCTCAATATGCTATCAGATTC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAAAAGGACACACAACATaGCTTTGCTTCCAAACATCA +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILKGHTT*LCFQTS
Trigger: TGATGTTTGGAAGCAAAGCAATGTTGTGTGTCCTTT...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423517.6
ENST00000618073.1
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATCTCAGTGAGGTTGCATaGCCTTATCACATATGCTTA +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYLSEVA*PYHICL
Trigger: TAAGCATATGTGATAAGGCAATGCAACCTCACTGAG...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS GCA 90 bp CATAGAAAGAATCTGCAGATATGCTTGATATTGGACTGCTTGCCATaGTACTTCTTTCCTCCAAACCTATTCTCAAGTCTAAACTATTGT +
Preference number: 5 (lower is better)
Translates to: HRKNLQICLILDCLP*YFFPPNLFSSLNYC
Trigger: ACAATAGTTTAGACTTGAGAATAGGTTTGGAGGAAAGAAGTAGCATGGCAAGCAGTCCAATATCAAGCATATCTGCAGATTCTTTCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGTTGTTGAGAAGATATaGATTTGGGAGTGCCATCCT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLVVEKI*IWECHP
Trigger: AGGATGGCACTCCCAAATCAATATCTTCTCAACAAC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATTGTGCTCCTCAGTGAGGTTGCATTGCCTTATCACATATGCTTATACATATATTTTTCCAGATCCTGTTaGGCTTACTGGTTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: IVLLSEVALPYHICLYIYFSRSC*AYWFCR
Trigger: TCTACAAAACCAGTAAGCCAAACAGGATCTGGAAAA...ATATATGTATAAGCATATGTGATAAGGCAATGCAACCTCACTGAGGAGCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGTGCATGTGTTAAAATaGGCCTTTTCTGGAACATGC +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLVHVLK*AFSGTC
Trigger: GCATGTTCCAGAAAAGGCCAATTTTAACACATGCAC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGTTTAGGACTCATTTaGGTTTGTGCTTTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGLGLI*VCAFLG
Trigger: ACCCAAGAAAGCACAAACCAAAATGAGTCCTAAACC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTATCCTTTTTGAGTCCCTaGAGAATATCCTTTTCATCA +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILSFLSP*RISFSS
Trigger: TGATGAAAAGGATATTCTCAAGGGACTCAAAAAGGA...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ACATGCCCAACACATCTGATACACTTAACAACTATGGAAACACGAGTGGAAAATTATATCTGTTGGTTTTaGTGTAGTTGTTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TCPTHLIHLTTMETRVENYICWF*CSCWKL
Trigger: CAGCTTCCAACAACTACACAAAAACCAACAGATATA...ATTTTCCACTCGTGTTTCCATAGTTGTTAAGTGTATCAGATGTGTTGGGCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTAAAGATAGGCCTGTaGGTTTGGGGTGTATATCTG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLKIGL*VWGVYL
Trigger: CAGATATACACCCCAAACCAACAGGCCTATCTTTAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGGGATTTGGAAAATCTaGGTGAAGACTTGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLGIWKI*VKTCWS
Trigger: ACTCCAACAAGTCTTCACCAAGATTTTCCAAATCCC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAACGGTGTACCATCCTaGGCTTTGTGGTATTTCAAT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLNGVPS*ALWYFN
Trigger: ATTGAAATACCACAAAGCCAAGGATGGTACACCGTT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GGTATAAGTCCTGGAAAACTGGCAGCCACTTGTGCTTATAATTTCTGTATTCTAGTTCATCTGTATAATTaGCTCTTGATGTTGACTGAG +
Preference number: 5 (lower is better)
Translates to: GISPGKLAATCAYNFCILVHLYN*LLMLTE
Trigger: CTCAGTCAACATCAAGAGCAAATTATACAGATGAAC...TAGAATACAGAAATTATAAGCACAAGTGGCTGCCAGTTTTCCAGGACTTATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423517.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATGTTTAGTCCTTCTCTaGTACTCAGCACTTGCATTC +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLCLVLL*YSALAF
Trigger: GAATGCAAGTGCTGAGTACAAGAGAAGGACTAAACA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS TCA 90 bp TCAATTACATCACCAACAAGTTGCAATTTTCCATCTTCTTTATACTaGGGCTTCTCTAAATGTATGTTATCTAGAGCAAGAGGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SITSPTSCNFPSSLY*GFSKCMLSRARGSG
Trigger: TCCAGAGCCTCTTGCTCTAGATAACATACATTTAGAGAAGCCTCAGTATAAAGAAGATGGAAAATTGCAACTTGTTGGTGATGTAATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 90 bp TCCAAACCTATTCTCAAGTCTAAACTATTGTACTTACTACCAAGATaGGAAACAGCAAATGTGTTATCCGTAGAAACAGGTGCTATCATA +
Preference number: 5 (lower is better)
Translates to: SKPILKSKLLYLLPR*ETANVLSVETGAII
Trigger: TATGATAGCACCTGTTTCTACGGATAACACATTTGCTGTTTCCCATCTTGGTAGTAAGTACAATAGTTTAGACTTGAGAATAGGTTTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAGAGGATGTCATGGTTaGAGAACCTTTAGTCGTATA +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLRGCHG*RTFSRI
Trigger: TATACGACTAAAGGTTCTCAAACCATGACATCCTCT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTGATGGTACAAAGTTaGTTGCTCAAAATGAGACTG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLMVQS*LLKMRL
Trigger: CAGTCTCATTTTGAGCAACAAACTTTGTACCATCAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACTGTATAATTTGCTCTaGATGTTGACTGAGTGGTCT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLLYNLL*MLTEWS
Trigger: AGACCACTCAGTCAACATCAAGAGCAAATTATACAG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGAATCTGATAGCATATaGAGGTCCAGTCTTACACAT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLESDSI*RSSLTH
Trigger: ATGTGTAAGACTGGACCTCAATATGCTATCAGATTC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATTTACTCTAGGTCCTTaGGTACATAGACTGAAGATG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLFTLGP*VHRLKM
Trigger: CATCTTCAGTCTATGTACCAAAGGACCTAGAGTAAA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp GATACTCTGAACTTCTTCATATGTTTTAGAAGTCAAGGGAATTCCATTCCATTCATTCCATTCCAATACTaGCATCCTCCAAGGAAACTT +
Preference number: 5 (lower is better)
Translates to: DTLNFFICFRSQGNSIPFIPFQY*HPPRKL
Trigger: AAGTTTCCTTGGAGGATGCAAGTATTGGAATGGAAT...GAATGGAATGGAATTCCCTTGACTTCTAAAACATATGAAGAAGTTCAGAGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAAACCATGATCTTTTCTaGTTCTCGGAACCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLNHDLF*FSEPLN
Trigger: ATTCAAAGGTTCCGAGAACAAGAAAAGATCATGGTT...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTACATATTTTCCCAACATaGATGAACTTGATCACTGTG +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLHIFPT*MNLITV
Trigger: CACAGTGATCAAGTTCATCAATGTTGGGAAAATATG...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTAGTTATCTTTCTCAGTTaGGGGAAGATCGAATTTGTA +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLVIFLS*GKIEFV
Trigger: TACAAATTCGATCTTCCCCAAACTGAGAAAGATAAC...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS-3UTR CAA 90 bp ATGCTGATAGAGAAGAGGGTGCTTCATTTTAAGACTTGGACATTAGTTGTTTTATCTTTAGGACCAAATTaGAAACCAAGAAGCAACATC +
Preference number: 5 (lower is better)
Translates to: MLIEKRVLHFKTWTLVVLSLGPN*KPRSNI
Trigger: GATGTTGCTTCTTGGTTTCAAATTTGGTCCTAAAGA...TAAAACAACTAATGTCCAAGTCTTAAAATGAAGCACCCTCTTCTCTATCAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS CCA 72 bp GGAGCCCTTCCCCTTCCAAGCTCGCCTCGTTGCCCATaGCTCAGGGAGACTCGGGGCCGCCGCGCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: GALPLPSSPRCP*LRETRGRRAPS
Trigger: GGAGGGAGCGCGGCGGCCCCGAGTCTCCCTGAGCCATGGGCAACGAGGCGAGCTTGGAAGGGGAAGGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp GTGCCTCCTCCATGTTGGACAGCGCCAGGCAACCTTTaGAGAAGACACCTCCCGGACGCCGCCTCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: VPPPCWTAPGNL*RRHLPDAASAP
Trigger: GGGCGCCGAGGCGGCGTCCGGGAGGTGTCTTCTGCAAAGGTTGCCTGGCGCTGTCCAACATGGAGGAGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp GGGTTAGTCCCGCTCGCAGGTAACGCCCGCTGCCGGTaGCTCCTCCATGTTGGACAGCGCCAGGCAACCTTT +
Preference number: 6 (lower is better)
Translates to: GLVPLAGNARCR*LLHVGQRQATF
Trigger: AAAGGTTGCCTGGCGCTGTCCAACATGGAGGAGGCACCGGCAGCGGGCGTTACCTGCGAGCGGGACTAACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp GGACGCTTCCCTTGGGCAGCCCCTGCGCCCTTGACATaGCAGCGGCGATCTGTCTCCTCTCCTCTTCGCTCA +
Preference number: 6 (lower is better)
Translates to: GRFPWAAPAPLT*QRRSVSSPLRS
Trigger: TGAGCGAAGAGGAGAGGAGACAGATCGCCGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TCGCAGGTAACGCCCGCTGCCGGTGCCTCCTCCATGTaGGACAGCGCCAGGCAACCTTTGCAGAAGACACCT +
Preference number: 6 (lower is better)
Translates to: SQVTPAAGASSM*DSARQPLQKTP
Trigger: AGGTGTCTTCTGCAAAGGTTGCCTGGCGCTGTCCAACATGGAGGAGGCACCGGCAGCGGGCGTTACCTGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp TGCTGCTGCTTCCTTCACTGTCCACGCTATACCCACTaGCAAAGCTGCTGCCCGAGGAGCCGGTGGACACAG +
Preference number: 6 (lower is better)
Translates to: CCCFLHCPRYTH*QSCCPRSRWTQ
Trigger: CTGTGTCCACCGGCTCCTCGGGCAGCAGCTTTGGCAGTGGGTATAGCGTGGACAGTGAAGGAAGCAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000432078.2
CDS TCA 72 bp TTGGCCAGCGGTAGGTCGTGGGCCAGGGGGTGTTGGTaGCCCTTTTGGCATTGGCTTGGCATCTGGTTTAGG +
Preference number: 6 (lower is better)
Translates to: LASGRSWARGCW*PFWHWLGIWFR
Trigger: CCTAAACCAGATGCCAAGCCAATGCCAAAAGGGTCACCAACACCCCCTGGCCCACGACCTACCGCTGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp TTGCACGGCAGCTTCGGCAGCAGCTATGGCAGCCCCTaGATCTTCCAGGTGGGTCTGAGTGACGCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: LHGSFGSSYGSP*IFQVGLSDAGF
Trigger: AAAACCAGCGTCACTCAGACCCACCTGGAAGATGCAGGGGCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000432078.2
ENST00000618073.1
CDS CCA 72 bp AGGACCAAGAGGCTGAGCTGGAGGCTTTGTTGTCCCTaGTGGCTGGACTGGGGGTTTCACTGTCCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: RTKRLSWRLCCP*WLDWGFHCPWL
Trigger: CAACCAGGGACAGTGAAACCCCCAGTCCAGCCACCAGGGACAACAAAGCCTCCAGCTCAGCCTCTTGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp GTTGAGCCAATGGCTTTGTTAGCCCTGAGGGCTGAGCTGGGGGCTTaGCAGGCCCAGGCTGTGATTTTTCATGTCCAGGCTGCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: VEPMALLALRAELGA*QAQAVIFHVQAAVL
Trigger: CAGCACAGCAGCCTGGACATGAAAAATCACAGCCTGGGCCTGCAAAGCCCCCAGCTCAGCCCTCAGGGCTAACAAAGCCATTGGCTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp TGTTGGGCCAGTCTGCTGGGCAGAAGTCTTTCCGGGTCCTGCCTGTaGAGCTGGAATCTTTCCTGGCCCAGGCTGCTGAACTGGAGTCTT +
Preference number: 6 (lower is better)
Translates to: CWASLLGRSLSGSCL*SWNLSWPRLLNWSL
Trigger: AAGACTCCAGTTCAGCAGCCTGGGCCAGGAAAGATTCCAGCTCAACAGGCAGGACCCGGAAAGACTTCTGCCCAGCAGACTGGCCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp CTGAGCTGGAGGCTTTGTTGTCCCTGGTGGCTGGACTaGGGGTTTCACTGTCCCTGGTTGTTGAGCCAATGG +
Preference number: 6 (lower is better)
Translates to: LSWRLCCPWWLD*GFHCPWLLSQW
Trigger: CCATTGGCTCAACAACCAGGGACAGTGAAACCCCCAGTCCAGCCACCAGGGACAACAAAGCCTCCAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp ACCAAGAGGCTGAGCTGGAGGCTTTGTTGTCCCTGGTaGCTGGACTGGGGGTTTCACTGTCCCTGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: TKRLSWRLCCPW*LDWGFHCPWLL
Trigger: CAACAACCAGGGACAGTGAAACCCCCAGTCCAGCCACCAGGGACAACAAAGCCTCCAGCTCAGCCTCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp CTGGGCAGAAGTCTTTCCGGGTCCTGCCTGTTGAGCTaGAATCTTTCCTGGCCCAGGCTGCTGAACTGGAGT +
Preference number: 6 (lower is better)
Translates to: LGRSLSGSCLLS*NLSWPRLLNWS
Trigger: ACTCCAGTTCAGCAGCCTGGGCCAGGAAAGATTCCAGCTCAACAGGCAGGACCCGGAAAGACTTCTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp CTGGAGACTGTAGCCCAGGTTGTTGAGCTAGGGGTTTaGGTGTCCCCACCTGCTGGGTTGGAGGCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: LETVAQVVELGV*VSPPAGLEALL
Trigger: CAGCAAAGCCTCCAACCCAGCAGGTGGGGACACCAAAACCCCTAGCTCAACAACCTGGGCTACAGTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp AGTCTGCTGGGCAGAAGTCTTTCCGGGTCCTGCCTGTaGAGCTGGAATCTTTCCTGGCCCAGGCTGCTGAAC +
Preference number: 6 (lower is better)
Translates to: SLLGRSLSGSCL*SWNLSWPRLLN
Trigger: GTTCAGCAGCCTGGGCCAGGAAAGATTCCAGCTCAACAGGCAGGACCCGGAAAGACTTCTGCCCAGCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GTGATTGGGAGGCTTTGTTGGTTGAATGCGGAGTTGTaGCACGGCAGCTTCGGCAGCAGCTATGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: VIGRLCWLNAEL*HGSFGSSYGSP
Trigger: GGGGCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAACAAAGCCTCCCAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS CAA 72 bp CCGGTGATTGGGAGGCTTTGTTGGTTGAATGCGGAGTaGTTGCACGGCAGCTTCGGCAGCAGCTATGGCAGC +
Preference number: 6 (lower is better)
Translates to: PVIGRLCWLNAE*LHGSFGSSYGS
Trigger: GCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAACAAAGCCTCCCAATCACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS CAA 90 bp TTGTCCTGCTCAGATGGGACAGAAGGTTCTTTGGGAGGGGCTGGCTaGGACAAAGAATCTGCCTCAGGGGGCTGCTTGGCCTTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: LSCSDGTEGSLGGAG*DKESASGGCLALAE
Trigger: TTCAGCCAAGGCCAAGCAGCCCCCTGAGGCAGATTCTTTGTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp GATGTAGTGGTAACAGGTGCAGTCTTCAGTTTGGGCTaGGGTGATGACGGAACTGGAGCCAGATCCCCGCCT +
Preference number: 6 (lower is better)
Translates to: DVVVTGAVFSLG*GDDGTGARSPP
Trigger: AGGCGGGGATCTGGCTCCAGTTCCGTCATCACCCCAGCCCAAACTGAAGACTGCACCTGTTACCACTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp AGTGCCATCCTGCTGAAGCGGATCCCTACCAGGTCCTaGCTGCTTAGGAATCGGCTTGGGTGGCTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: SAILLKRIPTRS*LLRNRLGWLLL
Trigger: CAACAACAGCCACCCAAGCCGATTCCTAAGCAGCAAGGACCTGGTAGGGATCCGCTTCAGCAGGATGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GGGGCCTTGTCCTGCTCAGATGGGACAGAAGGTTCTTaGGGAGGGGCTGGCTTGGACAAAGAATCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: GALSCSDGTEGS*GGAGLDKESAS
Trigger: TGAGGCAGATTCTTTGTCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp ACCGCTTTTATGTGCTGTTGGTTGAATGCGGAGTTGTaGCACGGCAGCTTCGGCAGCAGCTATGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: TAFMCCWLNAEL*HGSFGSSYGSP
Trigger: GGGGCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAACAGCACATAAAAGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432078.2
CDS TCA 72 bp AGGTTGAGCTGGACGCCCAGGGTCCGGGGGTCTTCCTaGTTGCTTTGGAGGATGACTACTATCCAACTCTTG +
Preference number: 6 (lower is better)
Translates to: RLSWTPRVRGSS*LLWRMTTIQLL
Trigger: CAAGAGTTGGATAGTAGTCATCCTCCAAAGCAATCAGGAAGACCCCCGGACCCTGGGCGTCCAGCTCAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp TCAGGGGGCTGCTTGGCCTTGGCTGAAGGAGAGCCATaGAGGGTTGGTTGTTTCACTAGTGGTGGTGGCTTT +
Preference number: 6 (lower is better)
Translates to: SGGCLALAEGEP*RVGCFTSGGGF
Trigger: AAAGCCACCACCACTAGTGAAACAACCAACCCTTCATGGCTCTCCTTCAGCCAAGGCCAAGCAGCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp CAGCCCTGGCCATTCCCATTGGCTGGCCAACAGGACTaGGTGGGCTTTCTTCTTCAGAATTCTGGGCCACAA +
Preference number: 6 (lower is better)
Translates to: QPWPFPLAGQQD*VGFLLQNSGPQ
Trigger: TTGTGGCCCAGAATTCTGAAGAAGAAAGCCCACTCAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp CTATGGCAGCCCCTGCATCTTCCAGGTGGGTCTGAGTaGCGCTGGTTTTGCTTTGACTGCGAGATGGTCCAT +
Preference number: 6 (lower is better)
Translates to: LWQPLHLPGGSE*RWFCFDCEMVH
Trigger: ATGGACCATCTCGCAGTCAAAGCAAAACCAGCGTCACTCAGACCCACCTGGAAGATGCAGGGGCTGCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CCA 72 bp TTGAGCTGGAATCTTTCCTGGCCCAGGCTGCTGAACTaGAGTCTTTGTAGGCCCAGGTGCCTTAGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: LSWNLSWPRLLN*SLCRPRCLSWR
Trigger: TCTCCAGCTAAGGCACCTGGGCCTACAAAGACTCCAGTTCAGCAGCCTGGGCCAGGAAAGATTCCAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp AGCCGGTGGACACAGAGCTTTCTGCAGGCCGGTGATTaGGAGGCTTTGTTGGTTGAATGCGGAGTTGTTGCA +
Preference number: 6 (lower is better)
Translates to: SRWTQSFLQAGD*EALLVECGVVA
Trigger: TGCAACAACTCCGCATTCAACCAACAAAGCCTCCCAATCACCGGCCTGCAGAAAGCTCTGTGTCCACCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS CAA 72 bp CTGACCGCTTTTATGTGCTGTTGGTTGAATGCGGAGTaGTTGCACGGCAGCTTCGGCAGCAGCTATGGCAGC +
Preference number: 6 (lower is better)
Translates to: LTAFMCCWLNAE*LHGSFGSSYGS
Trigger: GCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAACAGCACATAAAAGCGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432078.2
CDS CAA 90 bp CAGGTTGAGCTGGACGCCCAGGGTCCGGGGGTCTTCCTGATTGCTTaGGAGGATGACTACTATCCAACTCTTGTTTCCTGTGCATGGAAG +
Preference number: 6 (lower is better)
Translates to: QVELDAQGPGVFLIA*EDDYYPTLVSCAWK
Trigger: CTTCCATGCACAGGAAACAAGAGTTGGATAGTAGTCATCCTCCAAAGCAATCAGGAAGACCCCCGGACCCTGGGCGTCCAGCTCAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp GATTTGCTCACTGCTGATGTAGTGGTAACAGGTGCAGTCTTCAGTTaGGGCTGGGGTGATGACGGAACTGGAGCCAGATCCCCGCCTAGA +
Preference number: 6 (lower is better)
Translates to: DLLTADVVVTGAVFS*GWGDDGTGARSPPR
Trigger: TCTAGGCGGGGATCTGGCTCCAGTTCCGTCATCACCCCAGCCCAAACTGAAGACTGCACCTGTTACCACTACATCAGCAGTGAGCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp GTTGGACTCAGAGGCTTGGGGTCAGACATAGAACGCTaGATCATCTTGGCTGTCTTAGGACTTGCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: VGLRGLGSDIER*IILAVLGLAGG
Trigger: TCCCCCAGCAAGTCCTAAGACAGCCAAGATGATGCAGCGTTCTATGTCTGACCCCAAGCCTCTGAGTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 72 bp AGACAGAGGAAGGTCTGGAGGAAGGTCTGGACCTGCTaGCACTACTGTATGGCTTATCCGCTTCATCCTGCA +
Preference number: 6 (lower is better)
Translates to: RQRKVWRKVWTC*HYCMAYPLHPA
Trigger: TGCAGGATGAAGCGGATAAGCCATACAGTAGTGGCAGCAGGTCCAGACCTTCCTCCAGACCTTCCTCTGTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp TTTATCATCAGCAACAGGGGCCTTGTCCTGCTCAGATaGGACAGAAGGTTCTTTGGGAGGGGCTGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: FIISNRGLVLLR*DRRFFGRGWLG
Trigger: TCCAAGCCAGCCCCTCCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAAGGCCCCTGTTGCTGATGATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp CAAGCCCATAGACAGAGGAAGGTCTGGAGGAAGGTCTaGACCTGCTGCCACTACTGTATGGCTTATCCGCTT +
Preference number: 6 (lower is better)
Translates to: QAHRQRKVWRKV*TCCHYCMAYPL
Trigger: AAGCGGATAAGCCATACAGTAGTGGCAGCAGGTCCAGACCTTCCTCCAGACCTTCCTCTGTCTATGGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp CTTCAGGCAATGAGTGGCTTGATCCAAACTGATCCCTaGTGTCTGCAGATATTGGTGGCAGGGGTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LQAMSGLIQTDP*CLQILVAGVQL
Trigger: CAGCTGGACCCCTGCCACCAATATCTGCAGACACCAGGGATCAGTTTGGATCAAGCCACTCATTGCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp CTGGACGCCCAGGGTCCGGGGGTCTTCCTGATTGCTTaGGAGGATGACTACTATCCAACTCTTGTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: LDAQGPGVFLIA*EDDYYPTLVSC
Trigger: ACAGGAAACAAGAGTTGGATAGTAGTCATCCTCCAAAGCAATCAGGAAGACCCCCGGACCCTGGGCGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp ACTGCTGATGTAGTGGTAACAGGTGCAGTCTTCAGTTaGGGCTGGGGTGATGACGGAACTGGAGCCAGATCC +
Preference number: 6 (lower is better)
Translates to: TADVVVTGAVFS*GWGDDGTGARS
Trigger: GGATCTGGCTCCAGTTCCGTCATCACCCCAGCCCAAACTGAAGACTGCACCTGTTACCACTACATCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GCCCTGGAACTTTCGTCTGCTGTTGGACTCAGAGGCTaGGGGTCAGACATAGAACGCTGCATCATCTTGGCT +
Preference number: 6 (lower is better)
Translates to: ALELSSAVGLRG*GSDIERCIILA
Trigger: AGCCAAGATGATGCAGCGTTCTATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp TTTACCATCTTGGGCTGCTTTGGTTTATCATCAGCAACAGGGGCCTaGTCCTGCTCAGATGGGACAGAAGGTTCTTTGGGAGGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: FTILGCFGLSSATGA*SCSDGTEGSLGGAG
Trigger: GCCAGCCCCTCCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp AAAGTGTCTGTAGTTCTACTTTTACTGAGACCAGGTTaGGCTGGACGCCCAGGGTCCGGGGGTCTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: KVSVVLLLLRPG*AGRPGSGGLPD
Trigger: ATCAGGAAGACCCCCGGACCCTGGGCGTCCAGCTCAACCTGGTCTCAGTAAAAGTAGAACTACAGACACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp GATGTAGGGGATGTACCAGGAGTGAAGCTGGAAGCATaGAGACTCGAAGATCCCTCTCCCCTTGACCTATCT +
Preference number: 6 (lower is better)
Translates to: DVGDVPGVKLEA*RLEDPSPLDLS
Trigger: AGATAGGTCAAGGGGAGAGGGATCTTCGAGTCTGCATGCTTCCAGCTTCACTCCTGGTACATCCCCTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp CACACAATACTGGGGTCCTGGTGGTGGTGTCATTCTTaGTGTGGAATACTGTGGGGTACTAATCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: HTILGSWWWCHS*CGILWGTNPSS
Trigger: GGAGCTGGGATTAGTACCCCACAGTATTCCACAGCAAGAATGACACCACCACCAGGACCCCAGTATTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp CCTGGAGAATCTTGGCTCGTGCCATTGTGTTGGTTCTaGAGATCCTTCTCCTGGAAACTGTGCCCATTGTGC +
Preference number: 6 (lower is better)
Translates to: PGESWLVPLCWF*RSFSWKLCPLC
Trigger: GCACAATGGGCACAGTTTCCAGGAGAAGGATCTGCAGAACCAACACAATGGCACGAGCCAAGATTCTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp TTATTTGCGTCTTTTACTTGGTTGAATGCGGAGTTGTaGCACGGCAGCTTCGGCAGCAGCTATGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: LFASFTWLNAEL*HGSFGSSYGSP
Trigger: GGGGCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAAGACGCAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CAA 90 bp AGATGGAGACACTGTTGGTGGCTGCAGAGGTTTTCCAGATCCTGTTaGGCTTACTGGTTTTGTAGATTGCTGAGCCGAGGGCTTTGCTGG +
Preference number: 6 (lower is better)
Translates to: RWRHCWWLQRFSRSC*AYWFCRLLSRGLCW
Trigger: CCAGCAAAGCCCTCGGCTCAGCAATCTACAAAACCAGTAAGCCAAACAGGATCTGGAAAACCTCTGCAGCCACCAACAGTGTCTCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp ACAGGCATAGGAGATGCTTTGGGTCCTGATGGTGCAGGTGGCATTTaGCGTATGTCTCCAAGCTGTCCTGATATTGCTCTCTGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: TGIGDALGPDGAGGI*RMSPSCPDIALWVW
Trigger: CCAAACCCAGAGAGCAATATCAGGACAGCTTGGAGACATACGCAAAATGCCACCTGCACCATCAGGACCCAAAGCATCTCCTATGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp GTTGGACTCAGAGGCTTGGGGTCAGACATAGAACGCTGCATCATCTaGGCTGTCTTAGGACTTGCTGGGGGAACTTTAGCCATATCTGGA +
Preference number: 6 (lower is better)
Translates to: VGLRGLGSDIERCII*AVLGLAGGTLAISG
Trigger: TCCAGATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCCAAGATGATGCAGCGTTCTATGTCTGACCCCAAGCCTCTGAGTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp AGCTCTCTGTCTATGTCCTGGAGAATCTTGGCTCGTGCCATTGTGTaGGTTCTGCAGATCCTTCTCCTGGAAACTGTGCCCATTGTGCTG +
Preference number: 6 (lower is better)
Translates to: SSLSMSWRILARAIV*VLQILLLETVPIVL
Trigger: CAGCACAATGGGCACAGTTTCCAGGAGAAGGATCTGCAGAACCAACACAATGGCACGAGCCAAGATTCTCCAGGACATAGACAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp CTGAGGAATTTATTTGCGTCTTTTACTTGGTTGAATGCGGAGTTGTaGCACGGCAGCTTCGGCAGCAGCTATGGCAGCCCCTGCATCTTC +
Preference number: 6 (lower is better)
Translates to: LRNLFASFTWLNAEL*HGSFGSSYGSPCIF
Trigger: GAAGATGCAGGGGCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAAGACGCAAATAAATTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CAA 90 bp ATGCTGAGGAATTTATTTGCGTCTTTTACTTGGTTGAATGCGGAGTaGTTGCACGGCAGCTTCGGCAGCAGCTATGGCAGCCCCTGCATC +
Preference number: 6 (lower is better)
Translates to: MLRNLFASFTWLNAE*LHGSFGSSYGSPCI
Trigger: GATGCAGGGGCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAAGACGCAAATAAATTCCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS TCA 72 bp CCAGGGTCCGGGGGTCTTCCTGATTGCTTTGGAGGATaGCTACTATCCAACTCTTGTTTCCTGTGCATGGAA +
Preference number: 6 (lower is better)
Translates to: PGSGGLPDCFGG*LLSNSCFLCME
Trigger: TTCCATGCACAGGAAACAAGAGTTGGATAGTAGTCATCCTCCAAAGCAATCAGGAAGACCCCCGGACCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp GCTCCAAACCCAAAGAGTTTCCCAGTCACGGTCTCTTaGGGAGTTGTAGGCTGTGATTTGGGGGCATCAGTA +
Preference number: 6 (lower is better)
Translates to: APNPKSFPVTVS*GVVGCDLGASV
Trigger: TACTGATGCCCCCAAATCACAGCCTACAACTCCTCAAGAGACCGTGACTGGGAAACTCTTTGGGTTTGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp CCCGTGTCGCTCAGACCTTGGGGGCTTTTAGGCTGCTaGGAACTTGAGGTGTCTGATTTGTCATCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: PVSLRPWGLLGC*ELEVSDLSSSF
Trigger: AAAGGAAGATGACAAATCAGACACCTCAAGTTCTCAGCAGCCTAAAAGCCCCCAAGGTCTGAGCGACACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp GAAGACTGTAAAGGTGCTAGGAAATCTGTCACTTCTTaGGACCGGCGTGTCTCAGTGGTTCGAAGGAGACGG +
Preference number: 6 (lower is better)
Translates to: EDCKGARKSVTS*DRRVSVVRRRR
Trigger: CCGTCTCCTTCGAACCACTGAGACACGCCGGTCTCAAGAAGTGACAGATTTCCTAGCACCTTTACAGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 72 bp CTCGGTATACTGAAAAGGAGCCCTGGAACTTTCGTCTaGTGTTGGACTCAGAGGCTTGGGGTCAGACATAGA +
Preference number: 6 (lower is better)
Translates to: LGILKRSPGTFV*CWTQRLGVRHR
Trigger: TCTATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGTATACCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 72 bp CTGCTGCCACTACTGTATGGCTTATCCGCTTCATCCTaGAGAGCTGAGCGTATGGTATTTCCTAATGTGCCC +
Preference number: 6 (lower is better)
Translates to: LLPLLYGLSASS*RAERMVFPNVP
Trigger: GGGCACATTAGGAAATACCATACGCTCAGCTCTGCAGGATGAAGCGGATAAGCCATACAGTAGTGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp AAGGTCAGTGGTTGGCTTTACCATCTTGGGCTGCTTTaGTTTATCATCAGCAACAGGGGCCTTGTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: KVSGWLYHLGLL*FIISNRGLVLL
Trigger: GAGCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAACCACTGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp ATGGTGGACTCTGTCATATCCTCACCAATGGGGGCCTaGGTTGGGCTAGATCCAGGTGTTAATTGCATCTGT +
Preference number: 6 (lower is better)
Translates to: MVDSVISSPMGA*VGLDPGVNCIC
Trigger: ACAGATGCAATTAACACCTGGATCTAGCCCAACCCAGGCCCCCATTGGTGAGGATATGACAGAGTCCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp TTGGGGGCGATTGGAGGTTTGCTTGGCTCAGGCCTGTaGGTAAATACAAGTCCAGATGGAATTGAAGATGGC +
Preference number: 6 (lower is better)
Translates to: LGAIGGLLGSGL*VNTSPDGIEDG
Trigger: GCCATCTTCAATTCCATCTGGACTTGTATTTACCCACAGGCCTGAGCCAAGCAAACCTCCAATCGCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp CTGATTCTAAGGCTTTGCCTGGTGAAAGTGGTGAGATaGGTGAGTAAAGGACTTTGGGGGATTTGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: LILRLCLVKVVR*VSKGLWGIWVG
Trigger: CCCCACCCAAATCCCCCAAAGTCCTTTACTCACCCATCTCACCACTTTCACCAGGCAAAGCCTTAGAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp ATACTGAAAAGGAGCCCTGGAACTTTCGTCTGCTGTTaGACTCAGAGGCTTGGGGTCAGACATAGAACGCTG +
Preference number: 6 (lower is better)
Translates to: ILKRSPGTFVCC*TQRLGVRHRTL
Trigger: CAGCGTTCTATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp ATGGCTTATCCGCTTCATCCTGCAGAGCTGAGCGTATaGTATTTCCTAATGTGCCCAGTCCTGTGCCAAGAG +
Preference number: 6 (lower is better)
Translates to: MAYPLHPAELSV*YFLMCPVLCQE
Trigger: CTCTTGGCACAGGACTGGGCACATTAGGAAATACCATACGCTCAGCTCTGCAGGATGAAGCGGATAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp CACTGTTGGTGGCTGCAGAGGTTTTCCAGATCCTGTTaGGCTTACTGGTTTTGTAGATTGCTGAGCCGAGGG +
Preference number: 6 (lower is better)
Translates to: HCWWLQRFSRSC*AYWFCRLLSRG
Trigger: CCCTCGGCTCAGCAATCTACAAAACCAGTAAGCCAAACAGGATCTGGAAAACCTCTGCAGCCACCAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TTGGGCTGCTTTGGTTTATCATCAGCAACAGGGGCCTaGTCCTGCTCAGATGGGACAGAAGGTTCTTTGGGA +
Preference number: 6 (lower is better)
Translates to: LGCFGLSSATGA*SCSDGTEGSLG
Trigger: TCCCAAAGAACCTTCTGTCCCATCTGAGCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp CAAGGTCAGTGGTTGGCTTTACCATCTTGGGCTGCTTaGGTTTATCATCAGCAACAGGGGCCTTGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: QGQWLALPSWAA*VYHQQQGPCPA
Trigger: AGCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAACCACTGACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp CTGACGTTCCCACTCCAATTCCTCAGCAAAGCGCTGTaGCTTAATTTTCTCCAGTTCCAGGAGCTCACGCTC +
Preference number: 6 (lower is better)
Translates to: LTFPLQFLSKAL*LNFLQFQELTL
Trigger: GAGCGTGAGCTCCTGGAACTGGAGAAAATTAAGCAACAGCGCTTTGCTGAGGAATTGGAGTGGGAACGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp CCTTACTATGTCTGCCTGTTTAGTCTGAGGCCTGGATGCATCTCGTaGAAGTGGCAATTTTGCATGGTCTGTCTGAGGAGTCTGGGTAGG +
Preference number: 6 (lower is better)
Translates to: PYYVCLFSLRPGCIS*KWQFCMVCLRSLGR
Trigger: CCTACCCAGACTCCTCAGACAGACCATGCAAAATTGCCACTTCAACGAGATGCATCCAGGCCTCAGACTAAACAGGCAGACATAGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp GATCAAGCTCTCTGTCTATGTCCTGGAGAATCTTGGCTCGTGCCATaGTGTTGGTTCTGCAGATCCTTCTCCTGGAAACTGTGCCCATTG +
Preference number: 6 (lower is better)
Translates to: DQALCLCPGESWLVP*CWFCRSFSWKLCPL
Trigger: CAATGGGCACAGTTTCCAGGAGAAGGATCTGCAGAACCAACACAATGGCACGAGCCAAGATTCTCCAGGACATAGACAGAGAGCTTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp GTGATTCTTCCCTCATGTGTTGCTGAACTTCAGGCAATGAGTGGCTaGATCCAAACTGATCCCTGGTGTCTGCAGATATTGGTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: VILPSCVAELQAMSG*IQTDPWCLQILVAG
Trigger: CCCTGCCACCAATATCTGCAGACACCAGGGATCAGTTTGGATCAAGCCACTCATTGCCTGAAGTTCAGCAACACATGAGGGAAGAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp TTCTGTAGGAACAGGCATAGGAGATGCTTTGGGTCCTaGTGGTGCAGGTGGCATTTTGCGTATGTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: FCRNRHRRCFGS*WCRWHFAYVSK
Trigger: CTTGGAGACATACGCAAAATGCCACCTGCACCATCAGGACCCAAAGCATCTCCTATGCCTGTTCCTACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp AGGTGTGTCAGAGGGTGGGACAGATGTAGCACTTTCTaGAGGCTCCGAGTAGGTCAAAATCAGCGATTCATG +
Preference number: 6 (lower is better)
Translates to: RCVRGWDRCSTF*RLRVGQNQRFM
Trigger: CATGAATCGCTGATTTTGACCTACTCGGAGCCTTCAGAAAGTGCTACATCTGTCCCACCCTCTGACACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp TTGGAGGGTGATCCCAAGGGCCAACTGGTAATTGCTTaGCTAGCAGAAGAATCTGTTGGAGTCCCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: LEGDPKGQLVIA*LAEESVGVPGS
Trigger: TGAACCAGGGACTCCAACAGATTCTTCTGCTAGTCAAGCAATTACCAGTTGGCCCTTGGGATCACCCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp GTAACTGTTGCTGAGCTAACGTCTCCTGCCTCATCATaGACTGGGCTTGCCGCTCTTCTTCTTGCTGAAAGA +
Preference number: 6 (lower is better)
Translates to: VTVAELTSPASS*TGLAALLLAER
Trigger: TCTTTCAGCAAGAAGAAGAGCGGCAAGCCCAGTTCATGATGAGGCAGGAGACGTTAGCTCAGCAACAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp GTTTGGGGAGCAGTTCTTGGTCGCTCAATGCCATGCTaGCTTTCTATTCGGGTTGGTCTTGTGCTACTCACT +
Preference number: 6 (lower is better)
Translates to: VWGAVLGRSMPC*LSIRVGLVLLT
Trigger: AGTGAGTAGCACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCGACCAAGAACTGCTCCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 72 bp GATACAAGGTCAGTGGTTGGCTTTACCATCTTGGGCTaGTTTGGTTTATCATCAGCAACAGGGGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: DTRSVVGFTILG*FGLSSATGALS
Trigger: GGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAACCACTGACCTTGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp CCATTAGATGACCTCAAAACACTCCCCACACAATACTaGGGTCCTGGTGGTGGTGTCATTCTTGCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: PLDDLKTLPTQY*GPGGGVILAVE
Trigger: TTCCACAGCAAGAATGACACCACCACCAGGACCCCAGTATTGTGTGGGGAGTGTTTTGAGGTCATCTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp CATCTCCCACCACTTCAGGAAACACTTCGGATGCTGTaGTTAAAGTGGGAACAGAGTCTATCGTCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: HLPPLQETLRML*LKWEQSLSSQQ
Trigger: CTGCTGAGACGATAGACTCTGTTCCCACTTTAACCACAGCATCCGAAGTGTTTCCTGAAGTGGTGGGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp TCTCTGCTACCGTTTGAACTGCTATGCTGGAGACTTTaGAAAGGGGTTTGGTCTTGTCAGCCTCTGTCATGC +
Preference number: 6 (lower is better)
Translates to: SLLPFELLCWRL*KGVWSCQPLSC
Trigger: GCATGACAGAGGCTGACAAGACCAAACCCCTTTCCAAAGTCTCCAGCATAGCAGTTCAAACGGTAGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp TGGCATCCACTCGTGCCCGTATGGAGGGTGTTCTTATaGTTCCAACTGGTTCAGTTTGCACAGATATCTCTG +
Preference number: 6 (lower is better)
Translates to: WHPLVPVWRVFL*FQLVQFAQISL
Trigger: CAGAGATATCTGTGCAAACTGAACCAGTTGGAACCATAAGAACACCCTCCATACGGGCACGAGTGGATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp GGAAATCTGTCACTTCTTGAGACCGGCGTGTCTCAGTaGTTCGAAGGAGACGGTCTGTTTTTGACAGATCCT +
Preference number: 6 (lower is better)
Translates to: GNLSLLETGVSQ*FEGDGLFLTDP
Trigger: AGGATCTGTCAAAAACAGACCGTCTCCTTCGAACCACTGAGACACGCCGGTCTCAAGAAGTGACAGATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp GCTGCCATGCTGAGGAATTTATTTGCGTCTTTTACTTaGTTGAATGCGGAGTTGTTGCACGGCAGCTTCGGC +
Preference number: 6 (lower is better)
Translates to: AAMLRNLFASFT*LNAELLHGSFG
Trigger: GCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAAGACGCAAATAAATTCCTCAGCATGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CAA 72 bp CTGCCTCATCATGAACTGGGCTTGCCGCTCTTCTTCTaGCTGAAAGAGAAGGTGTTGCTTCATAGACTGCAG +
Preference number: 6 (lower is better)
Translates to: LPHHELGLPLFF*LKEKVLLHRLQ
Trigger: CTGCAGTCTATGAAGCAACACCTTCTCTTTCAGCAAGAAGAAGAGCGGCAAGCCCAGTTCATGATGAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp CCCGGAGGTGAGATGAATAACCAATCTCTAAAGGTGTaGGGCGTTTCTTGTCTTTGGGTGGAGATGTGGCAC +
Preference number: 6 (lower is better)
Translates to: PGGEMNNQSLKV*GVSCLWVEMWH
Trigger: GTGCCACATCTCCACCCAAAGACAAGAAACGCCCAACACCTTTAGAGATTGGTTATTCATCTCACCTCCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp GCCATGCTGAGGAATTTATTTGCGTCTTTTACTTGGTaGAATGCGGAGTTGTTGCACGGCAGCTTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: AMLRNLFASFTW*NAELLHGSFGS
Trigger: GCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAAGACGCAAATAAATTCCTCAGCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CAA 90 bp ATGAAGATACAAGGTCAGTGGTTGGCTTTACCATCTTGGGCTGCTTaGGTTTATCATCAGCAACAGGGGCCTTGTCCTGCTCAGATGGGA +
Preference number: 6 (lower is better)
Translates to: MKIQGQWLALPSWAA*VYHQQQGPCPAQMG
Trigger: TCCCATCTGAGCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAACCACTGACCTTGTATCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp GTTGCTGATGATGAAGATACAAGGTCAGTGGTTGGCTTTACCATCTaGGGCTGCTTTGGTTTATCATCAGCAACAGGGGCCTTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: VADDEDTRSVVGFTI*GCFGLSSATGALSC
Trigger: GCAGGACAAGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAACCACTGACCTTGTATCTTCATCATCAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp CATCAGACTGAACGGTGTACCATCCTTGGCTTTGTGGTATTTCAATaGCCACAACAGCTGAAGCTGTGGTGGTTGCATCTTCAGTTGCCC +
Preference number: 6 (lower is better)
Translates to: HQTERCTILGFVVFQ*PQQLKLWWLHLQLP
Trigger: GGGCAACTGAAGATGCAACCACCACAGCTTCAGCTGTTGTGGCAATTGAAATACCACAAAGCCAAGGATGGTACACCGTTCAGTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp TCGTGCCCGTATGGAGGGTGTTCTTATGGTTCCAACTGGTTCAGTTaGCACAGATATCTCTGCTACCGTTTGAACTGCTATGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: SCPYGGCSYGSNWFS*HRYLCYRLNCYAGD
Trigger: GTCTCCAGCATAGCAGTTCAAACGGTAGCAGAGATATCTGTGCAAACTGAACCAGTTGGAACCATAAGAACACCCTCCATACGGGCACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp TCCCTTTCCACAAGATCAAGCTCTCTGTCTATGTCCTGGAGAATCTaGGCTCGTGCCATTGTGTTGGTTCTGCAGATCCTTCTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: SLSTRSSSLSMSWRI*ARAIVLVLQILLLE
Trigger: TTCCAGGAGAAGGATCTGCAGAACCAACACAATGGCACGAGCCAAGATTCTCCAGGACATAGACAGAGAGCTTGATCTTGTGGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp TTTCCCAGTCACGGTCTCTTGAGGAGTTGTAGGCTGTaGTTTGGGGGCATCAGTAATACTTCCCAGATTCAG +
Preference number: 6 (lower is better)
Translates to: FPSHGLLRSCRL*FGGISNTSQIQ
Trigger: CTGAATCTGGGAAGTATTACTGATGCCCCCAAATCACAGCCTACAACTCCTCAAGAGACCGTGACTGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp GCTTGTTTCATTGGGGCCCCTGGTCCACTTTGTGAATaGGGTCCAGGTTGGCCTGCAGTGGAAATTAAATTT +
Preference number: 6 (lower is better)
Translates to: ACFIGAPGPLCE*GPGWPAVEIKF
Trigger: AAATTTAATTTCCACTGCAGGCCAACCTGGACCTCATTCACAAAGTGGACCAGGGGCCCCAATGAAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp TGCAGATCCTTCTCCTGGAAACTGTGCCCATTGTGCTaGATGTGGATTGAGTTCCTGTGGAAATCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: CRSFSWKLCPLC*MWIEFLWKSPQ
Trigger: CTGAGGAGATTTCCACAGGAACTCAATCCACATTCAGCACAATGGGCACAGTTTCCAGGAGAAGGATCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp GCGTGTCTCAGTGGTTCGAAGGAGACGGTCTGTTTTTaGCAGATCCTTTTCATGAAGGCTAAATGCGGTGCT +
Preference number: 6 (lower is better)
Translates to: ACLSGSKETVCF*QILFMKAKCGA
Trigger: AGCACCGCATTTAGCCTTCATGAAAAGGATCTGTCAAAAACAGACCGTCTCCTTCGAACCACTGAGACACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp GATGAATGCTATGTCACGGTCATAGCCTCGAGTCCGTaGTTCTTCCCTCATGTGTTGCTGAACTTCAGGCAA +
Preference number: 6 (lower is better)
Translates to: DECYVTVIASSP*FFPHVLLNFRQ
Trigger: TTGCCTGAAGTTCAGCAACACATGAGGGAAGAATCACGGACTCGAGGCTATGACCGTGACATAGCATTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 72 bp TCTTCAATAGTAGGCAAAAGAGGGCCATGTGGTCTGTaGCGAGCTTTGCGTTGCTGTTTGCTCTCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: SSIVGKRGPCGL*RALRCCLLSPF
Trigger: AAAAGGAGAGAGCAAACAGCAACGCAAAGCTCGGCACAGACCACATGGCCCTCTTTTGCCTACTATTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp CATAGAACGCTGCATCATCTTGGCTGTCTTAGGACTTaGTGGGGGAACTTTAGCCATATCTGGATGCAGTAC +
Preference number: 6 (lower is better)
Translates to: HRTLHHLGCLRT*WGNFSHIWMQY
Trigger: GTACTGCATCCAGATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCCAAGATGATGCAGCGTTCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 72 bp CTGGACATGTTTAGTCCTTCTCTTGTACTCAGCACTTaGATTCTGGACAACCATGACTTGACCTCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LDMFSPSLVLST*ILDNHDLTSPW
Trigger: CCAGGGAGAGGTCAAGTCATGGTTGTCCAGAATGCAAGTGCTGAGTACAAGAGAAGGACTAAACATGTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp GTTCAGTTTTGCAGAGAGGACAGGTTGATTCTGGTTTaGGCGATTTCTCCAGTTTTGTGGGAAGGACAGCCT +
Preference number: 6 (lower is better)
Translates to: VQFCREDRLILV*AISPVLWEGQP
Trigger: AGGCTGTCCTTCCCACAAAACTGGAGAAATCGCCCAAACCAGAATCAACCTGTCCTCTCTGCAAAACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CCA 72 bp CTGTATGGGGGCTCAGCATGCTTTGATGTTGTAAGTTaGAGTGGTGTTGTCATTGCATGTTCTGCACCCACT +
Preference number: 6 (lower is better)
Translates to: LYGGSACFDVVS*SGVVIACSAPT
Trigger: AGTGGGTGCAGAACATGCAATGACAACACCACTCCAACTTACAACATCAAAGCATGCTGAGCCCCCATACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp TTTATTGGTGCTTCTTCCCTAGCTATAGGAAAGACCTaGTCACTTGGTATCCTGTATGGGGGCTCAGCATGC +
Preference number: 6 (lower is better)
Translates to: FIGASSLAIGKT*SLGILYGGSAC
Trigger: GCATGCTGAGCCCCCATACAGGATACCAAGTGACCAGGTCTTTCCTATAGCTAGGGAAGAAGCACCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp GTACTGAGATCCACTACTTCCCCATCAGTGATTCCCTaGGATACGGTGCTATCAGTCCATCCATTTGTGACA +
Preference number: 6 (lower is better)
Translates to: VLRSTTSPSVIP*DTVLSVHPFVT
Trigger: TGTCACAAATGGATGGACTGATAGCACCGTATCCCAGGGAATCACTGATGGGGAAGTAGTGGATCTCAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp TCGTGCCCGTATGGAGGGTGTTCTTATGGTTCCAACTaGTTCAGTTTGCACAGATATCTCTGCTACCGTTTG +
Preference number: 6 (lower is better)
Translates to: SCPYGGCSYGSN*FSLHRYLCYRL
Trigger: CAAACGGTAGCAGAGATATCTGTGCAAACTGAACCAGTTGGAACCATAAGAACACCCTCCATACGGGCACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp TCCCTTTCCACAAGATCAAGCTCTCTGTCTATGTCCTaGAGAATCTTGGCTCGTGCCATTGTGTTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: SLSTRSSSLSMS*RILARAIVLVL
Trigger: CAGAACCAACACAATGGCACGAGCCAAGATTCTCCAGGACATAGACAGAGAGCTTGATCTTGTGGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp GGTCCAGACCATGTCCATTTTCCAAACGAGACTCCCTaGGTTTATCAAACCAATCTGTTTCCTCACGACGCA +
Preference number: 6 (lower is better)
Translates to: GPDHVHFPNETP*VYQTNLFPHDA
Trigger: TGCGTCGTGAGGAAACAGATTGGTTTGATAAACCCAGGGAGTCTCGTTTGGAAAATGGACATGGTCTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GGATCCCTACCAGGTCCTTGCTGCTTAGGAATCGGCTaGGGTGGCTGTTGTTGTAAAGGAGGTTTTATGATT +
Preference number: 6 (lower is better)
Translates to: GSLPGPCCLGIG*GGCCCKGGFMI
Trigger: AATCATAAAACCTCCTTTACAACAACAGCCACCCAAGCCGATTCCTAAGCAGCAAGGACCTGGTAGGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TTCACTAGTGGTGGTGGCTTTTTAGGCTCAGGTGCCTaGGAGAGATCCTGTTTTGGTGCAGCATCCTTCTTT +
Preference number: 6 (lower is better)
Translates to: FTSGGGFLGSGA*ERSCFGAASFF
Trigger: AAAGAAGGATGCTGCACCAAAACAGGATCTCTCCAAGGCACCTGAGCCTAAAAAGCCACCACCACTAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GATGAAGATACAAGGTCAGTGGTTGGCTTTACCATCTaGGGCTGCTTTGGTTTATCATCAGCAACAGGGGCC +
Preference number: 6 (lower is better)
Translates to: DEDTRSVVGFTI*GCFGLSSATGA
Trigger: GGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAACCACTGACCTTGTATCTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GACAGGTTGATTCTGGTTTGGGCGATTTCTCCAGTTTaGTGGGAAGGACAGCCTTTTGAGGCTCAGCTGTTA +
Preference number: 6 (lower is better)
Translates to: DRLILVWAISPV*WEGQPFEAQLL
Trigger: TAACAGCTGAGCCTCAAAAGGCTGTCCTTCCCACAAAACTGGAGAAATCGCCCAAACCAGAATCAACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CAA 72 bp AGTTCAGTTTTGCAGAGAGGACAGGTTGATTCTGGTTaGGGCGATTTCTCCAGTTTTGTGGGAAGGACAGCC +
Preference number: 6 (lower is better)
Translates to: SSVLQRGQVDSG*GDFSSFVGRTA
Trigger: GGCTGTCCTTCCCACAAAACTGGAGAAATCGCCCAAACCAGAATCAACCTGTCCTCTCTGCAAAACTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CAA 72 bp CAAATCCCTCACTGTGGTGCTGAAAATGGAGCCAGGTaGTGTGGTGATAGCAAATGTAGAGGGTGTTGGAGT +
Preference number: 6 (lower is better)
Translates to: QIPHCGAENGAR*CGDSKCRGCWS
Trigger: ACTCCAACACCCTCTACATTTGCTATCACCACACAACCTGGCTCCATTTTCAGCACCACAGTGAGGGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp AGGGTCATAGTTATACTGGTAGATCTGCCGAATCTTTaGCTCCTCCAGCTGCTGGTGAAGCTGTTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: RVIVILVDLPNL*LLQLLVKLLLQ
Trigger: CTGCAACAACAGCTTCACCAGCAGCTGGAGGAGCAAAAGATTCGGCAGATCTACCAGTATAACTATGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp ACTGCTATGCTGGAGACTTTGGAAAGGGGTTTGGTCTaGTCAGCCTCTGTCATGCTGTCACCATATTTCCCT +
Preference number: 6 (lower is better)
Translates to: TAMLETLERGLV*SASVMLSPYFP
Trigger: AGGGAAATATGGTGACAGCATGACAGAGGCTGACAAGACCAAACCCCTTTCCAAAGTCTCCAGCATAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp CTGATAAGAAGGCTGTGGGGTTGGTGTAGGTTGAACTaGAGGTGTGAAGGACATTGTTGCCACAGCTTGGAA +
Preference number: 6 (lower is better)
Translates to: LIRRLWGWCRLN*RCEGHCCHSLE
Trigger: TTCCAAGCTGTGGCAACAATGTCCTTCACACCTCAAGTTCAACCTACACCAACCCCACAGCCTTCTTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp CCCTCATGTGTTGCTGAACTTCAGGCAATGAGTGGCTaGATCCAAACTGATCCCTGGTGTCTGCAGATATTG +
Preference number: 6 (lower is better)
Translates to: PSCVAELQAMSG*IQTDPWCLQIL
Trigger: CAATATCTGCAGACACCAGGGATCAGTTTGGATCAAGCCACTCATTGCCTGAAGTTCAGCAACACATGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp AATTTATTTGCGTCTTTTACTTGGTTGAATGCGGAGTaGTTGCACGGCAGCTTCGGCAGCAGCTATGGCAGC +
Preference number: 6 (lower is better)
Translates to: NLFASFTWLNAE*LHGSFGSSYGS
Trigger: GCTGCCATAGCTGCTGCCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAAGACGCAAATAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CAA 72 bp AGCTGCCATGCTGAGGAATTTATTTGCGTCTTTTACTaGGTTGAATGCGGAGTTGTTGCACGGCAGCTTCGG +
Preference number: 6 (lower is better)
Translates to: SCHAEEFICVFY*VECGVVARQLR
Trigger: CCGAAGCTGCCGTGCAACAACTCCGCATTCAACCAAGTAAAAGACGCAAATAAATTCCTCAGCATGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CAA 90 bp TTTCAATTGCCACAACAGCTGAAGCTGTGGTGGTTGCATCTTCAGTaGCCCAAAATTGACTGCCTTCCAGAGCAGCATACTGACCTTCCA +
Preference number: 6 (lower is better)
Translates to: FQLPQQLKLWWLHLQ*PKIDCLPEQHTDLP
Trigger: TGGAAGGTCAGTATGCTGCTCTGGAAGGCAGTCAATTTTGGGCAACTGAAGATGCAACCACCACAGCTTCAGCTGTTGTGGCAATTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp GGCTTTGTGGTATTTCAATTGCCACAACAGCTGAAGCTGTGGTGGTaGCATCTTCAGTTGCCCAAAATTGACTGCCTTCCAGAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: GFVVFQLPQQLKLWW*HLQLPKIDCLPEQH
Trigger: ATGCTGCTCTGGAAGGCAGTCAATTTTGGGCAACTGAAGATGCAACCACCACAGCTTCAGCTGTTGTGGCAATTGAAATACCACAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp TGCGAGATGGTCCATGAGAACGGAGATGGCCTTCTGATGATGATTTaGAGCTACCAGGACTACTATGGGATTTCTCAATGGTGGGAACCT +
Preference number: 6 (lower is better)
Translates to: CEMVHENGDGLLMMI*SYQDYYGISQWWEP
Trigger: AGGTTCCCACCATTGAGAAATCCCATAGTAGTCCTGGTAGCTCAAAATCATCATCAGAAGGCCATCTCCGTTCTCATGGACCATCTCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CAA 90 bp CATGAACTGGGCTTGCCGCTCTTCTTCTTGCTGAAAGAGAAGGTGTaGCTTCATAGACTGCAGCTCCTCCAACTTTTTCTGAACCATGAT +
Preference number: 6 (lower is better)
Translates to: HELGLPLFFLLKEKV*LHRLQLLQLFLNHD
Trigger: ATCATGGTTCAGAAAAAGTTGGAGGAGCTGCAGTCTATGAAGCAACACCTTCTCTTTCAGCAAGAAGAAGAGCGGCAAGCCCAGTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp TGGAATCTGCCCGGAGGTGAGATGAATAACCAATCTCTAAAGGTGTaGGGCGTTTCTTGTCTTTGGGTGGAGATGTGGCACTCAGATATT +
Preference number: 6 (lower is better)
Translates to: WNLPGGEMNNQSLKV*GVSCLWVEMWHSDI
Trigger: AATATCTGAGTGCCACATCTCCACCCAAAGACAAGAAACGCCCAACACCTTTAGAGATTGGTTATTCATCTCACCTCCGGGCAGATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp TTCTTGGTCGCTCAATGCCATGCTGACTTTCTATTCGGGTTGGTCTaGTGCTACTCACTTCACTGTCAGACATGTAATCACGATCCTCAG +
Preference number: 6 (lower is better)
Translates to: FLVAQCHADFLFGLV*CYSLHCQTCNHDPQ
Trigger: CTGAGGATCGTGATTACATGTCTGACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCGACCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp GAGCAGTTCTTGGTCGCTCAATGCCATGCTGACTTTCTATTCGGGTaGGTCTTGTGCTACTCACTTCACTGTCAGACATGTAATCACGAT +
Preference number: 6 (lower is better)
Translates to: EQFLVAQCHADFLFG*VLCYSLHCQTCNHD
Trigger: ATCGTGATTACATGTCTGACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCGACCAAGAACTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp AAACACAGGTTCAACAGAAACCAGATCTTTGGAGGGTaGTCCCAAGGGCCAACTGGTAATTGCTTGACTAGC +
Preference number: 6 (lower is better)
Translates to: KHRFNRNQIFGG*SQGPTGNCLTS
Trigger: GCTAGTCAAGCAATTACCAGTTGGCCCTTGGGATCACCCTCCAAAGATCTGGTTTCTGTTGAACCTGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp GTCACTTGGTATCCTGTATGGGGGCTCAGCATGCTTTaGTGTTGTAAGTTGGAGTGGTGTTGTCATTGCATG +
Preference number: 6 (lower is better)
Translates to: VTWYPVWGLSML*CCKLEWCCHCM
Trigger: CATGCAATGACAACACCACTCCAACTTACAACATCAAAGCATGCTGAGCCCCCATACAGGATACCAAGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp TGCTGTGGAATACTGTGGGGTACTAATCCCAGCTCCTaGAATGACTTGTCGTGTTTCTGGATATGGACCTGT +
Preference number: 6 (lower is better)
Translates to: CCGILWGTNPSS*NDLSCFWIWTC
Trigger: ACAGGTCCATATCCAGAAACACGACAAGTCATTTCAGGAGCTGGGATTAGTACCCCACAGTATTCCACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp GCTGTCACCATATTTCCCTACACGAGCTTTCCTCCTTaGTCTAGTAGGCATATCCCACTCATCCTGATCTTC +
Preference number: 6 (lower is better)
Translates to: AVTIFPYTSFPP*SSRHIPLILIF
Trigger: GAAGATCAGGATGAGTGGGATATGCCTACTAGATCAAGGAGGAAAGCTCGTGTAGGGAAATATGGTGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp CGAAGGAGACGGTCTGTTTTTGACAGATCCTTTTCATaGAGGCTAAATGCGGTGCTTAATGCCGCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: RRRRSVFDRSFS*RLNAVLNAAVP
Trigger: AGGAACAGCGGCATTAAGCACCGCATTTAGCCTTCATGAAAAGGATCTGTCAAAAACAGACCGTCTCCTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp AACAAGGAAGCTCACTCATCTGTGTGCTGTGTTTCTTaGTCTCCAACCTTGATCACTGCCATGCCATCTTCC +
Preference number: 6 (lower is better)
Translates to: NKEAHSSVCCVS*SPTLITAMPSS
Trigger: GGAAGATGGCATGGCAGTGATCAAGGTTGGAGATCAAGAAACACAGCACACAGATGAGTGAGCTTCCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456006.2
CDS GCA 72 bp CCTTACTATGTCTGCCTGTTTAGTCTGAGGCCTGGATaGATCTCGTTGAAGTGGCAATTTTGCATGGTCTGT +
Preference number: 6 (lower is better)
Translates to: PYYVCLFSLRPG*ISLKWQFCMVC
Trigger: ACAGACCATGCAAAATTGCCACTTCAACGAGATGCATCCAGGCCTCAGACTAAACAGGCAGACATAGTAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp ACCTGGTCACTTGGTATCCTGTATGGGGGCTCAGCATaGTTTGATGTTGTAAGTTGGAGTGGTGTTGTCATT +
Preference number: 6 (lower is better)
Translates to: TWSLGILYGGSA*FDVVSWSGVVI
Trigger: AATGACAACACCACTCCAACTTACAACATCAAAGCATGCTGAGCCCCCATACAGGATACCAAGTGACCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp ATGAAGATACAAGGTCAGTGGTTGGCTTTACCATCTTaGGCTGCTTTGGTTTATCATCAGCAACAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: MKIQGQWLALPS*AALVYHQQQGP
Trigger: AGGCCCCTGTTGCTGATGATAAACCAAAGCAGCCCAAGATGGTAAAGCCAACCACTGACCTTGTATCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp AGAACGCTGCATCATCTTGGCTGTCTTAGGACTTGCTaGGGGAACTTTAGCCATATCTGGATGCAGTACTTT +
Preference number: 6 (lower is better)
Translates to: RTLHHLGCLRTC*GNFSHIWMQYF
Trigger: AAAGTACTGCATCCAGATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACAGCCAAGATGATGCAGCGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp TGGTCGCTCAATGCCATGCTGACTTTCTATTCGGGTTaGTCTTGTGCTACTCACTTCACTGTCAGACATGTA +
Preference number: 6 (lower is better)
Translates to: WSLNAMLTFYSG*SCATHFTVRHV
Trigger: TACATGTCTGACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp TCTTGGTCTGTGGTTGTTTCCCTTCTTGCACTGTCTTaGGAGCCACTCTGCCTTCAAGCTTTTCTTCAGCAA +
Preference number: 6 (lower is better)
Translates to: SWSVVVSLLALS*EPLCLQAFLQQ
Trigger: TTGCTGAAGAAAAGCTTGAAGGCAGAGTGGCTCCAAAGACAGTGCAAGAAGGGAAACAACCACAGACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GCCATGAGTGACGTCTTCCTGCATCTTCATCAATGCTaGTGCTACTTTTTCGAGTCAGTCGTCTGTGTTTCC +
Preference number: 6 (lower is better)
Translates to: AMSDVFLHLHQC*CYFFESVVCVS
Trigger: GGAAACACAGACGACTGACTCGAAAAAGTAGCACAAGCATTGATGAAGATGCAGGAAGACGTCACTCATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TTGGTCGCTCAATGCCATGCTGACTTTCTATTCGGGTaGGTCTTGTGCTACTCACTTCACTGTCAGACATGT +
Preference number: 6 (lower is better)
Translates to: LVAQCHADFLFG*VLCYSLHCQTC
Trigger: ACATGTCTGACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGCGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp CTTCATCATGCCATGAGTGACGTCTTCCTGCATCTTCATCAATGCTaGTGCTACTTTTTCGAGTCAGTCGTCTGTGTTTCCCTGCTGTTA +
Preference number: 6 (lower is better)
Translates to: LHHAMSDVFLHLHQC*CYFFESVVCVSLLL
Trigger: TAACAGCAGGGAAACACAGACGACTGACTCGAAAAAGTAGCACAAGCATTGATGAAGATGCAGGAAGACGTCACTCATGGCATGATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp AGACCAACACTAGGAGCTGTACTTCTGGTTGCTGAAACCTCAGTCTaGGAAACTTCAGTAGTGAGAAACTGTGTAACTGATGTGGGAGCT +
Preference number: 6 (lower is better)
Translates to: RPTLGAVLLVAETSV*ETSVVRNCVTDVGA
Trigger: AGCTCCCACATCAGTTACACAGTTTCTCACTACTGAAGTTTCCAAGACTGAGGTTTCAGCAACCAGAAGTACAGCTCCTAGTGTTGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp CAGAGCAGCATACTGACCTTCCAAAATTGCCTGCTCTGTAGTGGTTaGTGGAGAAGCAGTTCCAGAAGGGTCATAGTTATACTGGTAGAT +
Preference number: 6 (lower is better)
Translates to: QSSILTFQNCLLCSG*WRSSSRRVIVILVD
Trigger: ATCTACCAGTATAACTATGACCCTTCTGGAACTGCTTCTCCACAAACCACTACAGAGCAGGCAATTTTGGAAGGTCAGTATGCTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp ACCTATGTTGAGTTCAGTTTTGCAGAGAGGACAGGTTaGTTCTGGTTTGGGCGATTTCTCCAGTTTTGTGGG +
Preference number: 6 (lower is better)
Translates to: TYVEFSFAERTG*FWFGRFLQFCG
Trigger: CCCACAAAACTGGAGAAATCGCCCAAACCAGAATCAACCTGTCCTCTCTGCAAAACTGAACTCAACATAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS TCA 72 bp TCCTTGGCTTTGTGGTATTTCAATTGCCACAACAGCTaGAGCTGTGGTGGTTGCATCTTCAGTTGCCCAAAA +
Preference number: 6 (lower is better)
Translates to: SLALWYFNCHNS*SCGGCIFSCPK
Trigger: TTTTGGGCAACTGAAGATGCAACCACCACAGCTTCAGCTGTTGTGGCAATTGAAATACCACAAAGCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 72 bp CATGCCATGAGTGACGTCTTCCTGCATCTTCATCAATaGTTGTGCTACTTTTTCGAGTCAGTCGTCTGTGTT +
Preference number: 6 (lower is better)
Translates to: HAMSDVFLHLHQ*LCYFFESVVCV
Trigger: AACACAGACGACTGACTCGAAAAAGTAGCACAAGCATTGATGAAGATGCAGGAAGACGTCACTCATGGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp TCCAGTTCCAGGAGCTCACGCTCCAAGTCTAGCTGCTaGTGTTGTTTATCTTCTTCAGGGACAATTAAAAGA +
Preference number: 6 (lower is better)
Translates to: SSSRSSRSKSSC*CCLSSSGTIKR
Trigger: TCTTTTAATTGTCCCTGAAGAAGATAAACAACAGCAGCAGCTAGACTTGGAGCGTGAGCTCCTGGAACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp TTAGGACTTGCTGGGGGAACTTTAGCCATATCTGGATaGAGTACTTTCTGTGGACTTATATCATCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: LGLAGGTLAISG*STFCGLISSGR
Trigger: CCTCCCTGATGATATAAGTCCACAGAAAGTACTGCATCCAGATATGGCTAAAGTTCCCCCAGCAAGTCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp CTGACCTTCCAAAATTGCCTGCTCTGTAGTGGTTTGTaGAGAAGCAGTTCCAGAAGGGTCATAGTTATACTG +
Preference number: 6 (lower is better)
Translates to: LTFQNCLLCSGL*RSSSRRVIVIL
Trigger: CAGTATAACTATGACCCTTCTGGAACTGCTTCTCCACAAACCACTACAGAGCAGGCAATTTTGGAAGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp ACTACAGAAAACACAGGTTCAACAGAAACCAGATCTTaGGAGGGTGATCCCAAGGGCCAACTGGTAATTGCT +
Preference number: 6 (lower is better)
Translates to: TTENTGSTETRS*EGDPKGQLVIA
Trigger: AGCAATTACCAGTTGGCCCTTGGGATCACCCTCCAAAGATCTGGTTTCTGTTGAACCTGTGTTTTCTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GTATTTCAATTGCCACAACAGCTGAAGCTGTGGTGGTaGCATCTTCAGTTGCCCAAAATTGACTGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: VFQLPQQLKLWW*HLQLPKIDCLP
Trigger: TGGAAGGCAGTCAATTTTGGGCAACTGAAGATGCAACCACCACAGCTTCAGCTGTTGTGGCAATTGAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp GCTCAATGCCATGCTGACTTTCTATTCGGGTTGGTCTaGTGCTACTCACTTCACTGTCAGACATGTAATCAC +
Preference number: 6 (lower is better)
Translates to: AQCHADFLFGLV*CYSLHCQTCNH
Trigger: GTGATTACATGTCTGACAGTGAAGTGAGTAGCACAAGACCAACCCGAATAGAAAGTCAGCATGGCATTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp GTCCATGAGAACGGAGATGGCCTTCTGATGATGATTTaGAGCTACCAGGACTACTATGGGATTTCTCAATGG +
Preference number: 6 (lower is better)
Translates to: VHENGDGLLMMI*SYQDYYGISQW
Trigger: CCATTGAGAAATCCCATAGTAGTCCTGGTAGCTCAAAATCATCATCAGAAGGCCATCTCCGTTCTCATGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CAA 90 bp AACCTTCCATCTTGGTCTGTGGTTGTTTCCCTTCTTGCACTGTCTTaGGAGCCACTCTGCCTTCAAGCTTTTCTTCAGCAATTTGTACTT +
Preference number: 6 (lower is better)
Translates to: NLPSWSVVVSLLALS*EPLCLQAFLQQFVL
Trigger: AAGTACAAATTGCTGAAGAAAAGCTTGAAGGCAGAGTGGCTCCAAAGACAGTGCAAGAAGGGAAACAACCACAGACCAAGATGGAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp CAGAAGAAGGTGGGTGATCAAACACGGTTTCGGATAAGCTACTTTTaGTTCGTTCGGCCTCCAACTCCTTTTTATCTCTGTAAGCTTCCA +
Preference number: 6 (lower is better)
Translates to: QKKVGDQTRFRISYF*FVRPPTPFYLCKLP
Trigger: TGGAAGCTTACAGAGATAAAAAGGAGTTGGAGGCCGAACGAACAAAAAGTAGCTTATCCGAAACCGTGTTTGATCACCCACCTTCTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp CTCCAACTTTTTCTGAACCATGATCTTTTCTTGTTCTCGGAACCTTaGAATTTCCTGACGTTCCCACTCCAATTCCTCAGCAAAGCGCTG +
Preference number: 6 (lower is better)
Translates to: LQLFLNHDLFLFSEP*NFLTFPLQFLSKAL
Trigger: CAGCGCTTTGCTGAGGAATTGGAGTGGGAACGTCAGGAAATTCAAAGGTTCCGAGAACAAGAAAAGATCATGGTTCAGAAAAAGTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp CTTGAAGTAGACTCATCCATTGTTACGACTGTTCTGTaGGACTTGGTTGTACTGAGATCCACTACTTCCCCA +
Preference number: 6 (lower is better)
Translates to: LEVDSSIVTTVL*DLVVLRSTTSP
Trigger: TGGGGAAGTAGTGGATCTCAGTACAACCAAGTCTCACAGAACAGTCGTAACAATGGATGAGTCTACTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp AATGTCCGTTTCAGATGCACCTGTTGTTATAAAATATaGTCTAGGCATTGGCTGGCTATGGTGCATGGCAGG +
Preference number: 6 (lower is better)
Translates to: NVRFRCTCCYKI*SRHWLAMVHGR
Trigger: CCTGCCATGCACCATAGCCAGCCAATGCCTAGATCATATTTTATAACAACAGGTGCATCTGAAACGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp GTTATAAAATATGATCTAGGCATTGGCTGGCTATGGTaGATGGCAGGTAATGAAGTCACTGCATCAGCCGTA +
Preference number: 6 (lower is better)
Translates to: VIKYDLGIGWLW*MAGNEVTASAV
Trigger: TACGGCTGATGCAGTGACTTCATTACCTGCCATGCACCATAGCCAGCCAATGCCTAGATCATATTTTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp TTCAGTTTGCACAGATATCTCTGCTACCGTTTGAACTaGTATGCTGGAGACTTTGGAAAGGGGTTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: FSLHRYLCYRLN*YAGDFGKGFGL
Trigger: AAGACCAAACCCCTTTCCAAAGTCTCCAGCATAGCAGTTCAAACGGTAGCAGAGATATCTGTGCAAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 72 bp TATGGTTCCAACTGGTTCAGTTTGCACAGATATCTCTaGTACCGTTTGAACTGCTATGCTGGAGACTTTGGA +
Preference number: 6 (lower is better)
Translates to: YGSNWFSLHRYL*YRLNCYAGDFG
Trigger: TCCAAAGTCTCCAGCATAGCAGTTCAAACGGTAGCAGAGATATCTGTGCAAACTGAACCAGTTGGAACCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS GCA 72 bp AATGTGTTTAATTATTTCTACCTTGGCATCCACTCGTaGCCGTATGGAGGGTGTTCTTATGGTTCCAACTGG +
Preference number: 6 (lower is better)
Translates to: NVFNYFYLGIHS*PYGGCSYGSNW
Trigger: CCAGTTGGAACCATAAGAACACCCTCCATACGGGCACGAGTGGATGCCAAGGTAGAAATAATTAAACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp GTTGTTATAAAATATGATCTAGGCATTGGCTGGCTATaGTGCATGGCAGGTAATGAAGTCACTGCATCAGCC +
Preference number: 6 (lower is better)
Translates to: VVIKYDLGIGWL*CMAGNEVTASA
Trigger: GGCTGATGCAGTGACTTCATTACCTGCCATGCACCATAGCCAGCCAATGCCTAGATCATATTTTATAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp AACCAATCTCTAAAGGTGTTGGGCGTTTCTTGTCTTTaGGTGGAGATGTGGCACTCAGATATTGAGGACTTT +
Preference number: 6 (lower is better)
Translates to: NQSLKVLGVSCL*VEMWHSDIEDF
Trigger: AAAGTCCTCAATATCTGAGTGCCACATCTCCACCCAAAGACAAGAAACGCCCAACACCTTTAGAGATTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp TGTCTTAGGACTTGCTGGGGGAACTTTAGCCATATCTaGATGCAGTACTTTCTGTGGACTTATATCATCAGG +
Preference number: 6 (lower is better)
Translates to: CLRTCWGNFSHI*MQYFLWTYIIR
Trigger: CCTGATGATATAAGTCCACAGAAAGTACTGCATCCAGATATGGCTAAAGTTCCCCCAGCAAGTCCTAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp CCTTCTGATGATGATTTTGAGCTACCAGGACTACTATaGGATTTCTCAATGGTGGGAACCTGCATGTCCTTT +
Preference number: 6 (lower is better)
Translates to: PSDDDFELPGLL*DFSMVGTCMSF
Trigger: AAAGGACATGCAGGTTCCCACCATTGAGAAATCCCATAGTAGTCCTGGTAGCTCAAAATCATCATCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS CAA 72 bp TTAGGAGGATCCTTAGAACCTATGTTGAGTTCAGTTTaGCAGAGAGGACAGGTTGATTCTGGTTTGGGCGAT +
Preference number: 6 (lower is better)
Translates to: LGGSLEPMLSSV*QRGQVDSGLGD
Trigger: ATCGCCCAAACCAGAATCAACCTGTCCTCTCTGCAAAACTGAACTCAACATAGGTTCTAAGGATCCTCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CAA 72 bp GTGGGTGATCAAACACGGTTTCGGATAAGCTACTTTTaGTTCGTTCGGCCTCCAACTCCTTTTTATCTCTGT +
Preference number: 6 (lower is better)
Translates to: VGDQTRFRISYF*FVRPPTPFYLC
Trigger: ACAGAGATAAAAAGGAGTTGGAGGCCGAACGAACAAAAAGTAGCTTATCCGAAACCGTGTTTGATCACCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp CACATAGCTCCGATCTGTGGCATCTTCGTCATCCGTTaGTACACCACTGTCCACTATCTTTTTAAAACTTCG +
Preference number: 6 (lower is better)
Translates to: HIAPICGIFVIR*YTTVHYLFKTS
Trigger: CGAAGTTTTAAAAAGATAGTGGACAGTGGTGTACAAACGGATGACGAAGATGCCACAGATCGGAGCTATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp GTATTGAAGTTAGGAGGATCCTTAGAACCTATGTTGAGTTCAGTTTaGCAGAGAGGACAGGTTGATTCTGGTTTGGGCGATTTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: VLKLGGSLEPMLSSV*QRGQVDSGLGDFSS
Trigger: ACTGGAGAAATCGCCCAAACCAGAATCAACCTGTCCTCTCTGCAAAACTGAACTCAACATAGGTTCTAAGGATCCTCCTAACTTCAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CAA 90 bp CATTCAGTGCAAGTATTGAAGTTAGGAGGATCCTTAGAACCTATGTaGAGTTCAGTTTTGCAGAGAGGACAGGTTGATTCTGGTTTGGGC +
Preference number: 6 (lower is better)
Translates to: HSVQVLKLGGSLEPM*SSVLQRGQVDSGLG
Trigger: GCCCAAACCAGAATCAACCTGTCCTCTCTGCAAAACTGAACTCAACATAGGTTCTAAGGATCCTCCTAACTTCAATACTTGCACTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CAA 90 bp ATGGTGCAGGTGGCATTTTGCGTATGTCTCCAAGCTGTCCTGATATaGCTCTCTGGGTTTGGCAATTTAAACAAAGCCATTCTTGAATCT +
Preference number: 6 (lower is better)
Translates to: MVQVAFCVCLQAVLI*LSGFGNLNKAILES
Trigger: AGATTCAAGAATGGCTTTGTTTAAATTGCCAAACCCAGAGAGCAATATCAGGACAGCTTGGAGACATACGCAAAATGCCACCTGCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp TCATCAAATGCTTCATCGTCTTCATCATGCCATGAGTaGCGTCTTCCTGCATCTTCATCAATGCTTGTGCTA +
Preference number: 6 (lower is better)
Translates to: SSNASSSSSCHE*RLPASSSMLVL
Trigger: TAGCACAAGCATTGATGAAGATGCAGGAAGACGTCACTCATGGCATGATGAAGACGATGAAGCATTTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp ATAAACTGTGGTTATGCTATCCAGGGTAGTAATGGGTaGAGAGCTATCTGTGGTACAGACCGAAGAAACAGA +
Preference number: 6 (lower is better)
Translates to: INCGYAIQGSNG*RAICGTDRRNR
Trigger: TCTGTTTCTTCGGTCTGTACCACAGATAGCTCTTCACCCATTACTACCCTGGATAGCATAACCACAGTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp TTGTCGTGTTTCTGGATATGGACCTGTAGTCTTGCTTaGATAATCCATTACCTCACCTGTAGTAACTCTCCC +
Preference number: 6 (lower is better)
Translates to: LSCFWIWTCSLA*IIHYLTCSNSP
Trigger: GGGAGAGTTACTACAGGTGAGGTAATGGATTATTCAAGCAAGACTACAGGTCCATATCCAGAAACACGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp TCTTTGAGAGGATACCACCTTGGAGTGTTATCGAGGTaGGATGTGCTAGATAAATCAATCAATACCTCCCCA +
Preference number: 6 (lower is better)
Translates to: SLRGYHLGVLSR*DVLDKSINTSP
Trigger: TGGGGAGGTATTGATTGATTTATCTAGCACATCTCACCTCGATAACACTCCAAGGTGGTATCCTCTCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000426442.6
ENST00000618073.1
CDS GCA 72 bp ACCTCTGAGAGGAAGCCAGGCATCATACTAGACTTGTaGTCTTCCTTTAAATCAGTTCTGGACTTTGATTCT +
Preference number: 6 (lower is better)
Translates to: TSERKPGIILDL*SSFKSVLDFDS
Trigger: AGAATCAAAGTCCAGAACTGATTTAAAGGAAGAGCACAAGTCTAGTATGATGCCTGGCTTCCTCTCAGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp GTGTGTCTGAATCTGCTTCTGTTTGACATCCTAAACTaGCCCCTTTGTAAGTCTTTTCAGGTGCTGAAATGT +
Preference number: 6 (lower is better)
Translates to: VCLNLLLFDILN*PLCKSFQVLKC
Trigger: ACATTTCAGCACCTGAAAAGACTTACAAAGGGGGCAGTTTAGGATGTCAAACAGAAGCAGATTCAGACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp GGGAACTTTAGCCATATCTGGATGCAGTACTTTCTGTaGACTTATATCATCAGGGAGGGGTTTTTCATAAGG +
Preference number: 6 (lower is better)
Translates to: GNFSHIWMQYFL*TYIIREGFFIR
Trigger: CCTTATGAAAAACCCCTCCCTGATGATATAAGTCCACAGAAAGTACTGCATCCAGATATGGCTAAAGTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp GTGGCATTTTGCGTATGTCTCCAAGCTGTCCTGATATaGCTCTCTGGGTTTGGCAATTTAAACAAAGCCATT +
Preference number: 6 (lower is better)
Translates to: VAFCVCLQAVLI*LSGFGNLNKAI
Trigger: AATGGCTTTGTTTAAATTGCCAAACCCAGAGAGCAATATCAGGACAGCTTGGAGACATACGCAAAATGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp CTAGGAGCTGTACTTCTGGTTGCTGAAACCTCAGTCTaGGAAACTTCAGTAGTGAGAAACTGTGTAACTGAT +
Preference number: 6 (lower is better)
Translates to: LGAVLLVAETSV*ETSVVRNCVTD
Trigger: ATCAGTTACACAGTTTCTCACTACTGAAGTTTCCAAGACTGAGGTTTCAGCAACCAGAAGTACAGCTCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TTTCTGAACCATGATCTTTTCTTGTTCTCGGAACCTTaGAATTTCCTGACGTTCCCACTCCAATTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: FLNHDLFLFSEP*NFLTFPLQFLS
Trigger: GCTGAGGAATTGGAGTGGGAACGTCAGGAAATTCAAAGGTTCCGAGAACAAGAAAAGATCATGGTTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TATGGAGGGTGTTCTTATGGTTCCAACTGGTTCAGTTaGCACAGATATCTCTGCTACCGTTTGAACTGCTAT +
Preference number: 6 (lower is better)
Translates to: YGGCSYGSNWFS*HRYLCYRLNCY
Trigger: ATAGCAGTTCAAACGGTAGCAGAGATATCTGTGCAAACTGAACCAGTTGGAACCATAAGAACACCCTCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp CTTCTTCATCAAGCTCTGCTTGTTTCTTTCGAAGTTTaGCAGACTCCCTTTCCACAAGATCAAGCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: LLHQALLVSFEV*QTPFPQDQALC
Trigger: ACAGAGAGCTTGATCTTGTGGAAAGGGAGTCTGCAAAACTTCGAAAGAAACAAGCAGAGCTTGATGAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp AGTTTTCCCGTTCATCTGTATAATTTGCTCTTGATGTaGACTGAGTGGTCTAGAGTGGACCAATCTTTCCGG +
Preference number: 6 (lower is better)
Translates to: SFPVHLYNLLLM*TEWSRVDQSFR
Trigger: CCGGAAAGATTGGTCCACTCTAGACCACTCAGTCAACATCAAGAGCAAATTATACAGATGAACGGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TTGTGCCAGTTGACTATTCTTTTTCTGAGATCCACTTaGTCAAGCCAGATACAGGCTTCACCAATCAAGGTC +
Preference number: 6 (lower is better)
Translates to: LCQLTILFLRST*SSQIQASPIKV
Trigger: GACCTTGATTGGTGAAGCCTGTATCTGGCTTGACAAAGTGGATCTCAGAAAAAGAATAGTCAACTGGCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS TCA 72 bp GTTTTGGTTGTCTTATCATCTTCTTTAGGTAAACTCTaGGGTGTGCCAGATGGTAAACCTTCCATCTTGGTC +
Preference number: 6 (lower is better)
Translates to: VLVVLSSSLGKL*GVPDGKPSILV
Trigger: GACCAAGATGGAAGGTTTACCATCTGGCACACCTCAGAGTTTACCTAAAGAAGATGATAAGACAACCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp ATAGAAGATGCCATATCAGATAAGGAAATAACAATATaGTCAGCACTAGCTCTACCATCTGGTGGGGCAGTC +
Preference number: 6 (lower is better)
Translates to: IEDAISDKEITI*SALALPSGGAV
Trigger: GACTGCCCCACCAGATGGTAGAGCTAGTGCTGATCATATTGTTATTTCCTTATCTGATATGGCATCTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp ATGGGAAACAGCAAATGTGTTATCCGTAGAAACAGGTaGTATCATAAGGGGTTGGTTGCGAATCACTTCATA +
Preference number: 6 (lower is better)
Translates to: MGNSKCVIRRNR*YHKGLVANHFI
Trigger: TATGAAGTGATTCGCAACCAACCCCTTATGATAGCACCTGTTTCTACGGATAACACATTTGCTGTTTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp TTCTGGCTCTCAGTACTGCTACTAATCTCTTTGAGCTaGTTTCTGATGAACTCATCATCTTCAGAACCTGAA +
Preference number: 6 (lower is better)
Translates to: FWLSVLLLISLS*FLMNSSSSEPE
Trigger: TTCAGGTTCTGAAGATGATGAGTTCATCAGAAACCAGCTCAAAGAGATTAGTAGCAGTACTGAGAGCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp GAGTGGGCTTTCTTCTTCAGAATTCTGGGCCACAATTaGTATTCTTCCTCTACTTTGACTAATTGGCAAACT +
Preference number: 6 (lower is better)
Translates to: EWAFFFRILGHN*YSSSTLTNWQT
Trigger: AGTTTGCCAATTAGTCAAAGTAGAGGAAGAATACCAATTGTGGCCCAGAATTCTGAAGAAGAAAGCCCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp AATACTTGCATCCTCCAAGGAAACTTTATCTTCAGATaGGCCTTAGGTTTATTTCAACAATCCCAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: NTCILQGNFIFR*ALGLFQQSQAS
Trigger: GGAAGCCTGGGATTGTTGAAATAAACCTAAGGCCCATCTGAAGATAAAGTTTCCTTGGAGGATGCAAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413807.6
CDS CAA 72 bp TCCTTCTTCTGGCTCTCAGTACTGCTACTAATCTCTTaGAGCTGGTTTCTGATGAACTCATCATCTTCAGAA +
Preference number: 6 (lower is better)
Translates to: SFFWLSVLLLIS*SWFLMNSSSSE
Trigger: TTCTGAAGATGATGAGTTCATCAGAAACCAGCTCAAAGAGATTAGTAGCAGTACTGAGAGCCAGAAGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GGATTAAGACTTTTCTGGACATGTTTAGTCCTTCTCTaGTACTCAGCACTTGCATTCTGGACAACCATGACT +
Preference number: 6 (lower is better)
Translates to: GLRLFWTCLVLL*YSALAFWTTMT
Trigger: AGTCATGGTTGTCCAGAATGCAAGTGCTGAGTACAAGAGAAGGACTAAACATGTCCAGAAAAGTCTTAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TTCTATACCCTGAGAAGACATGTTTCTTCAATGCGTTaGAGTAGGACTGACCAAAAGTTTGTGCCAGTTGAC +
Preference number: 6 (lower is better)
Translates to: FYTLRRHVSSMR*SRTDQKFVPVD
Trigger: GTCAACTGGCACAAACTTTTGGTCAGTCCTACTCAAACGCATTGAAGAAACATGTCTTCTCAGGGTATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333891.14
CDS CAA 90 bp CTTAAAGCGTTAACCTCTGAGAGGAAGCCAGGCATCATACTAGACTaGTGCTCTTCCTTTAAATCAGTTCTGGACTTTGATTCTTTCAAG +
Preference number: 6 (lower is better)
Translates to: LKALTSERKPGIILD*CSSFKSVLDFDSFK
Trigger: CTTGAAAGAATCAAAGTCCAGAACTGATTTAAAGGAAGAGCACAAGTCTAGTATGATGCCTGGCTTCCTCTCAGAGGTTAACGCTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp AACAGAGTCTATCGTCTCAGCAGTAAGAGACTCCATAGTAATAGTTaGCAAACTGGCACTGATATCAATACCAGTTACTGCAATGTCCGT +
Preference number: 6 (lower is better)
Translates to: NRVYRLSSKRLHSNS*QTGTDINTSYCNVR
Trigger: ACGGACATTGCAGTAACTGGTATTGATATCAGTGCCAGTTTGCAAACTATTACTATGGAGTCTCTTACTGCTGAGACGATAGACTCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp CTCAGTCAAATGTGGTGTAGGGTTAAATCCACAGAGATTACACACTaGATTCTTGCATTCAGTGCAAGTATTGAAGTTAGGAGGATCCTT +
Preference number: 6 (lower is better)
Translates to: LSQMWCRVKSTEITH*ILAFSASIEVRRIL
Trigger: AAGGATCCTCCTAACTTCAATACTTGCACTGAATGCAAGAATCAAGTGTGTAATCTCTGTGGATTTAACCCTACACCACATTTGACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CAA 90 bp TTTTTCTGTGATGACTCTGCAGAATATTTATCTGCTATTGTACTGTaGAGCTCAATTGTTTTAAATCGGCGTAGCCCTCCTCCTCCAGTA +
Preference number: 6 (lower is better)
Translates to: FFCDDSAEYLSAIVL*SSIVLNRRSPPPPV
Trigger: TACTGGAGGAGGAGGGCTACGCCGATTTAAAACAATTGAGCTCAACAGTACAATAGCAGATAAATATTCTGCAGAGTCATCACAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp TCTTTCATTGGAAGGGCTATTACAGAAGAAGGTGGGTaGTCAAACACGGTTTCGGATAAGCTACTTTTTGTT +
Preference number: 6 (lower is better)
Translates to: SFIGRAITEEGG*SNTVSDKLLFV
Trigger: AACAAAAAGTAGCTTATCCGAAACCGTGTTTGATCACCCACCTTCTTCTGTAATAGCCCTTCCAATGAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp AAGGTCTCTCCAGATGTAAAGTATGTAGTTGAAAGCTaGTCTTTCATTGGAAGGGCTATTACAGAAGAAGGT +
Preference number: 6 (lower is better)
Translates to: KVSPDVKYVVES*SFIGRAITEEG
Trigger: ACCTTCTTCTGTAATAGCCCTTCCAATGAAAGAGCAGCTTTCAACTACATACTTTACATCTGGAGAGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp ATCGTCTCAGCAGTAAGAGACTCCATAGTAATAGTTTaGAAACTGGCACTGATATCAATACCAGTTACTGCA +
Preference number: 6 (lower is better)
Translates to: IVSAVRDSIVIV*KLALISIPVTA
Trigger: TGCAGTAACTGGTATTGATATCAGTGCCAGTTTGCAAACTATTACTATGGAGTCTCTTACTGCTGAGACGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS GCA 72 bp TTTGAGGTTATCTTGGGCTCCAAATATAATGTAGTTTaGCGTGGCTTCTGTTGTATCACCATCATCTGTGAA +
Preference number: 6 (lower is better)
Translates to: FEVILGSKYNVV*RGFCCITIICE
Trigger: TTCACAGATGATGGTGATACAACAGAAGCCACGGCAAACTACATTATATTTGGAGCCCAAGATAACCTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CCA 72 bp GTAGAAGTTACCATAGTACCCAGGTCCACTATCTCATaGCTTTCTGGGATGATAAAAGAGCTTGAAACAATA +
Preference number: 6 (lower is better)
Translates to: VEVTIVPRSTIS*LSGMIKELETI
Trigger: TATTGTTTCAAGCTCTTTTATCATCCCAGAAAGCCATGAGATAGTGGACCTGGGTACTATGGTAACTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp CAAGTATTGAAGTTAGGAGGATCCTTAGAACCTATGTaGAGTTCAGTTTTGCAGAGAGGACAGGTTGATTCT +
Preference number: 6 (lower is better)
Translates to: QVLKLGGSLEPM*SSVLQRGQVDS
Trigger: AGAATCAACCTGTCCTCTCTGCAAAACTGAACTCAACATAGGTTCTAAGGATCCTCCTAACTTCAATACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CAA 72 bp GATGACTCTGCAGAATATTTATCTGCTATTGTACTGTaGAGCTCAATTGTTTTAAATCGGCGTAGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: DDSAEYLSAIVL*SSIVLNRRSPP
Trigger: AGGAGGGCTACGCCGATTTAAAACAATTGAGCTCAACAGTACAATAGCAGATAAATATTCTGCAGAGTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TATCGTCTCAGCAGTAAGAGACTCCATAGTAATAGTTaGCAAACTGGCACTGATATCAATACCAGTTACTGC +
Preference number: 6 (lower is better)
Translates to: YRLSSKRLHSNS*QTGTDINTSYC
Trigger: GCAGTAACTGGTATTGATATCAGTGCCAGTTTGCAAACTATTACTATGGAGTCTCTTACTGCTGAGACGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp TATCTGCATAGAAAGAATCTGCAGATATGCTTGATATaGGACTGCTTGCCATGCTACTTCTTTCCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: YLHRKNLQICLI*DCLPCYFFPPN
Trigger: GTTTGGAGGAAAGAAGTAGCATGGCAAGCAGTCCAATATCAAGCATATCTGCAGATTCTTTCTATGCAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp CTTCTCCCTGCGGTTAAATCAACGGGTTTTTCATCTTCTATTATTTaGGTCATCACACTTGAAGTAGACTCATCCATTGTTACGACTGTT +
Preference number: 6 (lower is better)
Translates to: LLPAVKSTGFSSSII*VITLEVDSSIVTTV
Trigger: AACAGTCGTAACAATGGATGAGTCTACTTCAAGTGTGATGACCAAAATAATAGAAGATGAAAAACCCGTTGATTTAACCGCAGGGAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp GCCATGCTACTTCTTTCCTCCAAACCTATTCTCAAGTCTAAACTATaGTACTTACTACCAAGATGGGAAACAGCAAATGTGTTATCCGTA +
Preference number: 6 (lower is better)
Translates to: AMLLLSSKPILKSKL*YLLPRWETANVLSV
Trigger: TACGGATAACACATTTGCTGTTTCCCATCTTGGTAGTAAGTACAATAGTTTAGACTTGAGAATAGGTTTGGAGGAAAGAAGTAGCATGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 90 bp TATCTGCATAGAAAGAATCTGCAGATATGCTTGATATTGGACTGCTaGCCATGCTACTTCTTTCCTCCAAACCTATTCTCAAGTCTAAAC +
Preference number: 6 (lower is better)
Translates to: YLHRKNLQICLILDC*PCYFFPPNLFSSLN
Trigger: GTTTAGACTTGAGAATAGGTTTGGAGGAAAGAAGTAGCATGGCAAGCAGTCCAATATCAAGCATATCTGCAGATTCTTTCTATGCAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS TCA 72 bp TGTGGTGTAGGGTTAAATCCACAGAGATTACACACTTaGTTCTTGCATTCAGTGCAAGTATTGAAGTTAGGA +
Preference number: 6 (lower is better)
Translates to: CGVGLNPQRLHT*FLHSVQVLKLG
Trigger: TCCTAACTTCAATACTTGCACTGAATGCAAGAATCAAGTGTGTAATCTCTGTGGATTTAACCCTACACCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CCA 72 bp TCTTCATACATCTCCTCAGCACTTTTTAACGCCTTTTaGCTACCTTCTTTCTGCATAATAGATTGCTCATCT +
Preference number: 6 (lower is better)
Translates to: SSYISSALFNAF*LPSFCIIDCSS
Trigger: AGATGAGCAATCTATTATGCAGAAAGAAGGTAGCCAAAAGGCGTTAAAAAGTGCTGAGGAGATGTATGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp TTCCTCAGAATCTTCAAATTTAGTTATCATGTCCACTaGCTCTGTATAAACTGTGGTTATGCTATCCAGGGT +
Preference number: 6 (lower is better)
Translates to: FLRIFKFSYHVH*LCINCGYAIQG
Trigger: ACCCTGGATAGCATAACCACAGTTTATACAGAGCCAGTGGACATGATAACTAAATTTGAAGATTCTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp AATTGCTTGACTAGCAGAAGAATCTGTTGGAGTCCCTaGTTCAGATGGCAATGTAATAACTACATAAGTTTC +
Preference number: 6 (lower is better)
Translates to: NCLTSRRICWSP*FRWQCNNYISF
Trigger: GAAACTTATGTAGTTATTACATTGCCATCTGAACCAGGGACTCCAACAGATTCTTCTGCTAGTCAAGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp ATGTGGTGTAGGGTTAAATCCACAGAGATTACACACTaGATTCTTGCATTCAGTGCAAGTATTGAAGTTAGG +
Preference number: 6 (lower is better)
Translates to: MWCRVKSTEITH*ILAFSASIEVR
Trigger: CCTAACTTCAATACTTGCACTGAATGCAAGAATCAAGTGTGTAATCTCTGTGGATTTAACCCTACACCACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000461143.1
CDS CAA 90 bp AGGCTCCGAGTAGGTCAAAATCAGCGATTCATGGGCAATTATCTCTaGAATTTCTCTTGTATAATCGGTTACATATTCATCCTCAATTTC +
Preference number: 6 (lower is better)
Translates to: RLRVGQNQRFMGNYL*NFSCIIGYIFILNF
Trigger: GAAATTGAGGATGAATATGTAACCGATTATACAAGAGAAATTCAAGAGATAATTGCCCATGAATCGCTGATTTTGACCTACTCGGAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp GGGTTTTTCATCTTCTATTATTTTGGTCATCACACTTaGAGTAGACTCATCCATTGTTACGACTGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: GFFIFYYFGHHT*SRLIHCYDCSV
Trigger: CACAGAACAGTCGTAACAATGGATGAGTCTACTTCAAGTGTGATGACCAAAATAATAGAAGATGAAAAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 90 bp AAGGCAATTTATAATCTGCTGAAGTCACTAAATTTAAGGTCATACTaGAAGTTAAAGATAGGCCTGTTGGTTTGGGGTGTATATCTGTTG +
Preference number: 6 (lower is better)
Translates to: KAIYNLLKSLNLRSY*KLKIGLLVWGVYLL
Trigger: CAACAGATATACACCCCAAACCAACAGGCCTATCTTTAACTTCAAGTATGACCTTAAATTTAGTGACTTCAGCAGATTATAAATTGCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CCA 72 bp ATTCTCAAGTCTAAACTATTGTACTTACTACCAAGATaGGAAACAGCAAATGTGTTATCCGTAGAAACAGGT +
Preference number: 6 (lower is better)
Translates to: ILKSKLLYLLPR*ETANVLSVETG
Trigger: ACCTGTTTCTACGGATAACACATTTGCTGTTTCCCATCTTGGTAGTAAGTACAATAGTTTAGACTTGAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333891.14
ENST00000423517.6
ENST00000437081.1
CDS CAA 72 bp ACTAAGATTTATAATAGAGGGTTGGACAGCACTAATTaGTTTCCCATAAACTTCATTTGCTGTGATCTGCCT +
Preference number: 6 (lower is better)
Translates to: TKIYNRGLDSTN*FPINFICCDLP
Trigger: AGGCAGATCACAGCAAATGAAGTTTATGGGAAACAAATTAGTGCTGTCCAACCCTCTATTATAAATCTTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GCGGTTAAATCAACGGGTTTTTCATCTTCTATTATTTaGGTCATCACACTTGAAGTAGACTCATCCATTGTT +
Preference number: 6 (lower is better)
Translates to: AVKSTGFSSSII*VITLEVDSSIV
Trigger: AACAATGGATGAGTCTACTTCAAGTGTGATGACCAAAATAATAGAAGATGAAAAACCCGTTGATTTAACCGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS TCA 72 bp TCACCAACAAGTTGCAATTTTCCATCTTCTTTATACTaGGGCTTCTCTAAATGTATGTTATCTAGAGCAAGA +
Preference number: 6 (lower is better)
Translates to: SPTSCNFPSSLY*GFSKCMLSRAR
Trigger: TCTTGCTCTAGATAACATACATTTAGAGAAGCCTCAGTATAAAGAAGATGGAAAATTGCAACTTGTTGGTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6
CDS CAA 72 bp GTAGGTCAAAATCAGCGATTCATGGGCAATTATCTCTaGAATTTCTCTTGTATAATCGGTTACATATTCATC +
Preference number: 6 (lower is better)
Translates to: VGQNQRFMGNYL*NFSCIIGYIFI
Trigger: GATGAATATGTAACCGATTATACAAGAGAAATTCAAGAGATAATTGCCCATGAATCGCTGATTTTGACCTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333891.14
ENST00000423517.6