Pregenerated sensors for PCLAF (Homo sapiens)
Ensembl gene IDs: ENSG00000166803Ensembl transcript IDs: ENST00000300035.9, ENST00000380258.6, ENST00000558008.3, ENST00000558250.1, ENST00000559280.1, ENST00000559519.5, ENST00000560234.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCCCAAGCCGGACTGCCGACTGCAGTGGCGCAATCTCGGCTCACTaGAAGCTCCACTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: RPSRTADCSGAISAH*KLHFPGSRHSPASA Trigger: GGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCGGCAGTCCGGCTTGGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCTCGCTCTGTCGCCCAAGCCGGACTGCCGACTGCAGTGGCGCAATCTCGGAAGGAGTGACAATATaGCACCATTCCAATAATCAA | + |
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Preference number: 2 (lower is better) Translates to: GVSLCRPSRTADCSGAISEGVTI*HHSNNQ Trigger: TTGATTATTGGAATGGTGCCATATTGTCACTCCTTC...CGAGATTGCGCCACTGCAGTCGGCAGTCCGGCTTGGGCGACAGAGCGAGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTGCAAAAAGGGTGATGAGGAATATTATACCCACTTCTTCAATTATACCTTTGTTCAGGCTGGAGTaGAGTGGCACAATCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: AAAKRVMRNIIPTSSIIPLFRLE*SGTIWA Trigger: AGCCCAGATTGTGCCACTGCACTCCAGCCTGAACAA...AGGTATAATTGAAGAAGTGGGTATAATATTCCTCATCACCCTTTTTGCAGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTGCAAAAAGGGTGATGAGGAATATTATACCCACTTCTTCAATTATACCTAAGGTTTTCCAACATTaGGTATTTGTCCTCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: AAAKRVMRNIIPTSSIIPKVFQH*VFVLLA Trigger: GGCAAGGAGGACAAATACGCAATGTTGGAAAACCTT...AGGTATAATTGAAGAAGTGGGTATAATATTCCTCATCACCCTTTTTGCAGCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| 3UTR GCA 72 bp | CGGACTGCCGACTGCAGTGGCGCAATCTCGGCTCACTaGAAGCTCCACTTCCCGGGTTCACGCCATTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: RTADCSGAISAH*KLHFPGSRHSP Trigger: AGGAGAATGGCGTGAACCCGGGAAGTGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCGGCAGTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGCTGCAAAAAGGGTGATGAGGAATATTATACCCACTTCTTCAATTATACCTCAAGGTTTTCCAACATaGCGTATTTGTCCTCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: AAAKRVMRNIIPTSSIIPQGFPT*RICPPC Trigger: GCAAGGAGGACAAATACGCAATGTTGGAAAACCTTG...AGGTATAATTGAAGAAGTGGGTATAATATTCCTCATCACCCTTTTTGCAGCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR CCA 90 bp | GGAGTCTCGCTCTGTCGCCCAAGCCGGACTGCCGACTGCAGTGGCGCAATCTCGTTCCTTTTTGCCACTTaGGAGTTGGGCGCACGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GVSLCRPSRTADCSGAISFLFAT*ELGARK Trigger: TTTGCGTGCGCCCAACTCCCAAGTGGCAAAAAGGAA...CGAGATTGCGCCACTGCAGTCGGCAGTCCGGCTTGGGCGACAGAGCGAGACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | GGAGTCTCGCTCTGTCGCCCAAGCCGGACTGCCGACTGCAGTGGCGCAATCTCGAAGGTTTTCCAACATTaGGTATTTGTCCTCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: GVSLCRPSRTADCSGAISKVFQH*VFVLLA Trigger: GGCAAGGAGGACAAATACGCAATGTTGGAAAACCTT...CGAGATTGCGCCACTGCAGTCGGCAGTCCGGCTTGGGCGACAGAGCGAGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR CCA 90 bp | GGAGTCTCGCTCTGTCGCCCAAGCCGGACTGCCGACTGCAGTGGCGCAATCTCGGTTTTGCCATGCCTATaGGTTTATGGCATGATTTGC | + |
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Preference number: 4 (lower is better) Translates to: GVSLCRPSRTADCSGAISVLPCL*VYGMIC Trigger: GCAAATCATGCCATAAACCCATAGGCATGGCAAAAC...CGAGATTGCGCCACTGCAGTCGGCAGTCCGGCTTGGGCGACAGAGCGAGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR TCA 90 bp | TTAAAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAGAGGAGAGAACGAACTaGCTTCCCAGCCGAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LKQVEGVTIWHHSNNQTPEERTN*LPSRGC Trigger: ACACCCTCGGCTGGGAAGTCAGTTCGTTCTCTCCTC...TGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000559519.5 |
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| CDS-3UTR TCA 90 bp | GTTATGTTGAAAAATGTCATAGTAGCTCTTAGGAGTTTTGCCATGCCTATGGGTAACTCCTATCTCAGGTaGTCCACCTGCCTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VMLKNVIVALRSFAMPMGNSYLR*STCLGL Trigger: GAGGCCAAGGCAGGTGGATCACCTGAGATAGGAGTT...ACCCATAGGCATGGCAAAACTCCTAAGAGCTACTATGACATTTTTCAACATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR CCA 90 bp | AAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAATAAACCAAGCACCTTTCTaGGGGCTCGAGCAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: KQVEGVTIWHHSNNQTPINQAPF*GLEQPP Trigger: TGGTGGCTGCTCGAGCCCCCAGAAAGGTGCTTGGTT...TATTGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000380258.6 |
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| CDS-3UTR CCA 90 bp | TCTTGTTGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCAACCAAGCACCTTTCTaGGGGCTCGAGCAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SCCCRGIINRLNPQDQIINQAPF*GLEQPP Trigger: TGGTGGCTGCTCGAGCCCCCAGAAAGGTGCTTGGTT...GATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACAACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000380258.6 |
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| CDS-3UTR CCA 90 bp | AAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAATATTGCCACTTGGGAGTTaGGCGCACGCAAACGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: KQVEGVTIWHHSNNQTPILPLGS*AHANGV Trigger: AACCCCGTTTGCGTGCGCCCAACTCCCAAGTGGCAA...TATTGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000559519.5 |
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| CDS-3UTR TCA 90 bp | TGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCTTTACAGAGGAGAGAACGAACTaGCTTCCCAGCCGAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: CCRGIINRLNPQDQIIFTEERTN*LPSRGC Trigger: ACACCCTCGGCTGGGAAGTCAGTTCGTTCTCTCCTC...TGTAAAGATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000380258.6 |
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| CDS-3UTR TCA 90 bp | GTTATGTTGAAAAATGTCATAGTAGCTCTTAGGAGTTTTGCCATGCCTATGGGTTGGCCAGGCTGGTCTTaGACTCCTATCTCAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: VMLKNVIVALRSFAMPMGWPGWS*TPISGD Trigger: ATCACCTGAGATAGGAGTTCAAGACCAGCCTGGCCA...ACCCATAGGCATGGCAAAACTCCTAAGAGCTACTATGACATTTTTCAACATAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | GTTATGTTGAAAAATGTCATAGTAGCTCTTAGGAGTTTTGCCATGCCTATGGGTGCCTGGAACACTGTCTaGTTTAGTCCGCACCATGTT | + |
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Preference number: 4 (lower is better) Translates to: VMLKNVIVALRSFAMPMGAWNTV*FSPHHV Trigger: AACATGGTGCGGACTAAAGCAGACAGTGTTCCAGGC...ACCCATAGGCATGGCAAAACTCCTAAGAGCTACTATGACATTTTTCAACATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | TTAGGAGTTTTGCCATGCCTATGGGTTTATGGCATGATTTGCCTTTCATGTTATTCTCCAATTCCTTTTTaGCACTTGGGAGTTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LGVLPCLWVYGMICLSCYSPIPF*HLGVGR Trigger: GCGCCCAACTCCCAAGTGGCAAAAAGGAATTGGAGA...ATAACATGAAAGGCAAATCATGCCATAAACCCATAGGCATGGCAAAACTCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | TCTTGTTGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCTTGTTCAGGCTGGAGTaGAGTGGCACAATCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SCCCRGIINRLNPQDQIILFRLE*SGTIWA Trigger: AGCCCAGATTGTGCCACTGCACTCCAGCCTGAACAA...GATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACAACAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | AAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAATAGCCTGGAACACTGTCTaGTTTAGTCCGCACCATGTT | + |
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Preference number: 4 (lower is better) Translates to: KQVEGVTIWHHSNNQTPIAWNTV*FSPHHV Trigger: AACATGGTGCGGACTAAAGCAGACAGTGTTCCAGGC...TATTGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000559519.5 |
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| CDS-3UTR GCA 90 bp | TTAAAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCATCTCCAATTCCTTTTTaGCACTTGGGAGTTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LKQVEGVTIWHHSNNQTPSPIPF*HLGVGR Trigger: GCGCCCAACTCCCAAGTGGCAAAAAGGAATTGGAGA...TGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000559519.5 |
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| CDS-3UTR GCA 90 bp | TGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCTTTACAGGGTTTACGCTATGTTaGCTGGGCTGGTCTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: CCRGIINRLNPQDQIIFTGFTLC*LGWSPT Trigger: AGTTGGAGACCAGCCCAGGCAACATAGCGTAAACCC...TGTAAAGATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | TTAAAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCATGGTTCCACTGTGTGTaGCACCATGCCAGGCTAATT | + |
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Preference number: 4 (lower is better) Translates to: LKQVEGVTIWHHSNNQTPWFHCV*HHARLI Trigger: AATTAGCCTGGCATGGTGGCACACACAGTGGAACCA...TGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR CCA 90 bp | AAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAATATTCCTTTTTGCCACTTaGGAGTTGGGCGCACGCAAA | + |
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Preference number: 4 (lower is better) Translates to: KQVEGVTIWHHSNNQTPIFLFAT*ELGARK Trigger: TTTGCGTGCGCCCAACTCCCAAGTGGCAAAAAGGAA...TATTGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000559519.5 |
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| CDS-3UTR GCA 90 bp | TGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCTTTACAGCCTGGAACACTGTCTaGTTTAGTCCGCACCATGTT | + |
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Preference number: 4 (lower is better) Translates to: CCRGIINRLNPQDQIIFTAWNTV*FSPHHV Trigger: AACATGGTGCGGACTAAAGCAGACAGTGTTCCAGGC...TGTAAAGATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000380258.6 |
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| CDS-3UTR GCA 90 bp | GTTATGTTGAAAAATGTCATAGTAGCTCTTAGGAGTTTTGCCATGCCTATGGGTCCACTTTTCTGTAAGTaGCTGGAACACTGTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: VMLKNVIVALRSFAMPMGPLFCK*LEHCLL Trigger: AAGCAGACAGTGTTCCAGGCACTTACAGAAAAGTGG...ACCCATAGGCATGGCAAAACTCCTAAGAGCTACTATGACATTTTTCAACATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | GTTATGTTGAAAAATGTCATAGTAGCTCTTAGGAGTTTTGCCATGCCTATGGGTCTTTTGACAACAGGCTaGTGCAAAAAGGGTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: VMLKNVIVALRSFAMPMGLLTTG*CKKGDE Trigger: CTCATCACCCTTTTTGCAGCAGCCTGTTGTCAAAAG...ACCCATAGGCATGGCAAAACTCCTAAGAGCTACTATGACATTTTTCAACATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | AAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAATACCACTTTTCTGTAAGTaGCTGGAACACTGTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: KQVEGVTIWHHSNNQTPIPLFCK*LEHCLL Trigger: AAGCAGACAGTGTTCCAGGCACTTACAGAAAAGTGG...TATTGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000380258.6 |
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| CDS-3UTR GCA 90 bp | TTAGGAGTTTTGCCATGCCTATGGGTTTATGGCATGATTTGCCTTTCATGTTATTTAGGAGTTTTGCCATaGCTATGGGTTTATGGCATG | + |
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Preference number: 4 (lower is better) Translates to: LGVLPCLWVYGMICLSCYLGVLP*LWVYGM Trigger: CATGCCATAAACCCATAGGCATGGCAAAACTCCTAA...ATAACATGAAAGGCAAATCATGCCATAAACCCATAGGCATGGCAAAACTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | TCTTGTTGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCTTGACAACAGGCTGCTaGAAAAAGGGTGATGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SCCCRGIINRLNPQDQIILTTGC*KKGDEE Trigger: TTCCTCATCACCCTTTTTGCAGCAGCCTGTTGTCAA...GATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACAACAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | TTAAAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCACAGCTTTTCTGTAAGTaGCTGGAACACTGTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LKQVEGVTIWHHSNNQTPQLFCK*LEHCLL Trigger: AAGCAGACAGTGTTCCAGGCACTTACAGAAAAGCTG...TGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559519.5 |
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| CDS-3UTR TCA 90 bp | TCTTGTTGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCCCACTGTGCCCACCATaGTTCTATCCTAGTATTTTA | + |
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Preference number: 4 (lower is better) Translates to: SCCCRGIINRLNPQDQIIPLCPP*FYPSIL Trigger: TAAAATACTAGGATAGAATCATGGTGGGCACAGTGG...GATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACAACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000380258.6 |
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| CDS-3UTR GCA 90 bp | TTAGGAGTTTTGCCATGCCTATGGGTTTATGGCATGATTTGCCTTTCATGTTATAACGGGGTTCCCTCCTaGATATTTATTTTCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LGVLPCLWVYGMICLSCYNGVPS*IFIFSF Trigger: AAAGCTGAAAATAAATATGCAGGAGGGAACCCCGTT...ATAACATGAAAGGCAAATCATGCCATAAACCCATAGGCATGGCAAAACTCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | TCTTGTTGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCAAGGTTTTCCAACATTaGGTATTTGTCCTCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: SCCCRGIINRLNPQDQIIKVFQH*VFVLLA Trigger: GGCAAGGAGGACAAATACGCAATGTTGGAAAACCTT...GATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACAACAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000380258.6 |
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| CDS-3UTR CCA 90 bp | GTTATGTTGAAAAATGTCATAGTAGCTCTTAGGAGTTTTGCCATGCCTATGGGTATGCCTATGGGTTTATaGCATGATTTGCCTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: VMLKNVIVALRSFAMPMGMPMGL*HDLPFM Trigger: CATGAAAGGCAAATCATGCCATAAACCCATAGGCAT...ACCCATAGGCATGGCAAAACTCCTAAGAGCTACTATGACATTTTTCAACATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR GCA 90 bp | TTAAAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAAACGGGGTTCCCTCCTaGATATTTATTTTCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LKQVEGVTIWHHSNNQTPNGVPS*IFIFSF Trigger: AAAGCTGAAAATAAATATGCAGGAGGGAACCCCGTT...TGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000559519.5 |
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| CDS-3UTR GCA 90 bp | TTAAAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAAGGTTGCAAAGGACATaGTTTTCTCTTTGCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LKQVEGVTIWHHSNNQTPRLQRT*FSLCFS Trigger: GGAAAAGCAAAGAGAAAAGCATGTCCTTTGCAACCT...TGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000559519.5 |
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| CDS-3UTR CCA 90 bp | AAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAATATTTTCTGTAAGTGCCTaGAACACTGTCTGCTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: KQVEGVTIWHHSNNQTPIFSVSA*NTVCFS Trigger: ACTAAAGCAGACAGTGTTCCAGGCACTTACAGAAAA...TATTGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000559519.5 |
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| CDS-3UTR CCA 90 bp | TTAAAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCATTTTCTGTAAGTGCCTaGAACACTGTCTGCTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: LKQVEGVTIWHHSNNQTPFSVSA*NTVCFS Trigger: ACTAAAGCAGACAGTGTTCCAGGCACTTACAGAAAA...TGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000559519.5 |
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| CDS-3UTR TCA 90 bp | TTAAAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCATTTTCATCATTTGTGTaGTCAGGTTGCAAAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: LKQVEGVTIWHHSNNQTPFSSFV*SGCKGH Trigger: ATGTCCTTTGCAACCTGATCACACAAATGATGAAAA...TGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000559519.5 |
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| CDS-3UTR TCA 90 bp | AAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAATATTTTCATCATTTGTGTaGTCAGGTTGCAAAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: KQVEGVTIWHHSNNQTPIFSSFV*SGCKGH Trigger: ATGTCCTTTGCAACCTGATCACACAAATGATGAAAA...TATTGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000559519.5 |
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| CDS-3UTR CCA 90 bp | AAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAATAGAAGGAGTGACAATATaGCACCATTCCAATAATCAA | + |
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Preference number: 4 (lower is better) Translates to: KQVEGVTIWHHSNNQTPIEGVTI*HHSNNQ Trigger: TTGATTATTGGAATGGTGCCATATTGTCACTCCTTC...TATTGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000559519.5 |
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| CDS-3UTR CCA 90 bp | TGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCTTTACAGAAGGAGTGACAATATaGCACCATTCCAATAATCAA | + |
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Preference number: 4 (lower is better) Translates to: CCRGIINRLNPQDQIIFTEGVTI*HHSNNQ Trigger: TTGATTATTGGAATGGTGCCATATTGTCACTCCTTC...TGTAAAGATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000380258.6 |
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| CDS GCA 90 bp | CAATGGCCTTCCTCGAGTCCTACGTTTAGCGATTGGCAAGAATCATaGACTGACAGAGCTCGACTCCGGAGGGCACAAGGAAGTAGACAA | + |
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Preference number: 5 (lower is better) Translates to: QWPSSSPTFSDWQES*TDRARLRRAQGSRQ Trigger: TTGTCTACTTCCTTGTGCCCTCCGGAGTCGAGCTCTGTCAGTGCATGATTCTTGCCAATCGCTAAACGTAGGACTCGAGGAAGGCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558250.1 |
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| CDS GCA 90 bp | GGCTCGAGCAGCCACCACTTTTCTGTAAGTGCCTGGAACACTGTCTaGTTTAGTCCGCACCATGTTCAAACAAGAAGAGAGGAGAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GSSSHHFSVSAWNTV*FSPHHVQTRREERR Trigger: TCTCCTCTCCTCTCTTCTTGTTTGAACATGGTGCGGACTAAAGCAGACAGTGTTCCAGGCACTTACAGAAAAGTGGTGGCTGCTCGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000558008.3 |
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| CDS-3UTR CAA 90 bp | TTAAAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCATTTGCCACTTGGGAGTaGGGCGCACGCAAACGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LKQVEGVTIWHHSNNQTPFATWE*GARKRG Trigger: ACCCCGTTTGCGTGCGCCCAACTCCCAAGTGGCAAA...TGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000559519.5 |
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| CDS-3UTR CAA 90 bp | TTAGGAGTTTTGCCATGCCTATGGGTTTATGGCATGATTTGCCTTTCATGTTATAGGGTTTACGCTATGTaGCCTGGGCTGGTCTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: LGVLPCLWVYGMICLSCYRVYAM*PGLVSN Trigger: GTTGGAGACCAGCCCAGGCAACATAGCGTAAACCCT...ATAACATGAAAGGCAAATCATGCCATAAACCCATAGGCATGGCAAAACTCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR CAA 90 bp | GCTGCTGCAAAAAGGGTGATGAGGAATATTATACCCACTTCTTCAATTATACCTATTCCTTTTTGCCACTaGGGAGTTGGGCGCACGCAA | + |
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Preference number: 5 (lower is better) Translates to: AAAKRVMRNIIPTSSIIPIPFCH*GVGRTQ Trigger: TTGCGTGCGCCCAACTCCCAAGTGGCAAAAAGGAAT...AGGTATAATTGAAGAAGTGGGTATAATATTCCTCATCACCCTTTTTGCAGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000300035.9 |
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| CDS-3UTR CAA 90 bp | AAGCAAGTAGAAGGAGTGACAATATGGCACCATTCCAATAATCAAACACCAATAATTCCTTTTTGCCACTaGGGAGTTGGGCGCACGCAA | + |
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Preference number: 5 (lower is better) Translates to: KQVEGVTIWHHSNNQTPIIPFCH*GVGRTQ Trigger: TTGCGTGCGCCCAACTCCCAAGTGGCAAAAAGGAAT...TATTGGTGTTTGATTATTGGAATGGTGCCATATTGTCACTCCTTCTACTTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000559519.5 |
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| CDS-3UTR CAA 90 bp | TGTTGTAGAGGCATTATCAACCGTTTAAACCCTCAAGACCAAATTATCTTTACACAAGGTTTTCCAACATaGCGTATTTGTCCTCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: CCRGIINRLNPQDQIIFTQGFPT*RICPPC Trigger: GCAAGGAGGACAAATACGCAATGTTGGAAAACCTTG...TGTAAAGATAATTTGGTCTTGAGGGTTTAAACGGTTGATAATGCCTCTACAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300035.9 ENST00000380258.6 |
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| CDS GCA 72 bp | GCATCGCCACCATCCCCTTACCCATTTGGATCAGTGTaGCGTGTGTCCAGCTTGCTGCTCAGTGTGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: ASPPSPYPFGSV*RVSSLLLSVLE Trigger: CTCCAGCACACTGAGCAGCAAGCTGGACACACGGCACACTGATCCAAATGGGTAAGGGGATGGTGGCGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559280.1 |
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| CDS CAA 72 bp | ACCACAAGGAGACCGGCTGTAGGCTGTAGGGCACTGTaGGAGGGCTTTGTGGTTTCGGCTGCAGTAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TTRRPAVGCRAL*EGFVVSAAVAS Trigger: GGAAGCTACTGCAGCCGAAACCACAAAGCCCTCCAACAGTGCCCTACAGCCTACAGCCGGTCTCCTTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559280.1 |
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| CDS CCA 72 bp | CCCAGAATGAGCATCGCCACCATCCCCTTACCCATTTaGATCAGTGTGCCGTGTGTCCAGCTTGCTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PRMSIATIPLPI*ISVPCVQLAAQ Trigger: CTGAGCAGCAAGCTGGACACACGGCACACTGATCCAAATGGGTAAGGGGATGGTGGCGATGCTCATTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559280.1 |
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| CDS CAA 72 bp | ACCCAGAATGAGCATCGCCACCATCCCCTTACCCATTaGGATCAGTGTGCCGTGTGTCCAGCTTGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TQNEHRHHPLTH*DQCAVCPACCS Trigger: TGAGCAGCAAGCTGGACACACGGCACACTGATCCAAATGGGTAAGGGGATGGTGGCGATGCTCATTCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559280.1 |
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| CDS GCA 72 bp | TCCTCGAGTCCTACGTTTAGCGATTGGCAAGAATCATaGACTGACAGAGCTCGACTCCGGAGGGCACAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSSPTFSDWQES*TDRARLRRAQG Trigger: TCCTTGTGCCCTCCGGAGTCGAGCTCTGTCAGTGCATGATTCTTGCCAATCGCTAAACGTAGGACTCGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558250.1 ENST00000560234.1 |
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| CDS GCA 72 bp | TCAGGTTGCAAAGGACATGCTCCATTTGGATCAGTGTaGCGTGTGTCCAGCTTGCTGCTCAGTGTGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SGCKGHAPFGSV*RVSSLLLSVLE Trigger: CTCCAGCACACTGAGCAGCAAGCTGGACACACGGCACACTGATCCAAATGGAGCATGTCCTTTGCAACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558008.3 |
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| CDS CCA 72 bp | GGGGGCTCGAGCAGCCACCACTTTTCTGTAAGTGCCTaGAACACTGTCTGCTTTAGTCCGCACCATGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: GGSSSHHFSVSA*NTVCFSPHHVQ Trigger: TTGAACATGGTGCGGACTAAAGCAGACAGTGTTCCAGGCACTTACAGAAAAGTGGTGGCTGCTCGAGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000558008.3 |
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| CDS CCA 72 bp | TGCCAATGGCCTTCCTCGAGTCCTACGTTTAGCGATTaGCAAGAATCATGCACTGACAGAGCTCGACTCCGG | + |
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Preference number: 6 (lower is better) Translates to: CQWPSSSPTFSD*QESCTDRARLR Trigger: CCGGAGTCGAGCTCTGTCAGTGCATGATTCTTGCCAATCGCTAAACGTAGGACTCGAGGAAGGCCATTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558250.1 ENST00000560234.1 |
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| CDS GCA 72 bp | AGCCACCACTTTTCTGTAAGTGCCTGGAACACTGTCTaGTTTAGTCCGCACCATGTTCAAACAAGAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SHHFSVSAWNTV*FSPHHVQTRRE Trigger: CTCTCTTCTTGTTTGAACATGGTGCGGACTAAAGCAGACAGTGTTCCAGGCACTTACAGAAAAGTGGTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000300035.9 ENST00000380258.6 ENST00000558008.3 |
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| CDS GCA 72 bp | GTGGCTCCTGGTTTCTCTTTGCTTTTCCTAAGCCACTaGTTCCTGCCTCTTCAGGAATCTGATTCTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: VAPGFSLLFLSH*FLPLQESDSLF Trigger: AAAAAGAGAATCAGATTCCTGAAGAGGCAGGAAGCAGTGGCTTAGGAAAAGCAAAGAGAAACCAGGAGCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558008.3 |
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| CDS CAA 72 bp | TCTAGGCACCATTTGGATTCGGTTTTAGTGTATGGGTaGGAGAACTGTAGCTGTTTCTTGACCTGCCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SRHHLDSVLVYG*ENCSCFLTCLL Trigger: TAAGAGGCAGGTCAAGAAACAGCTACAGTTCTCCAACCCATACACTAAAACCGAATCCAAATGGTGCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559280.1 |
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| CDS GCA 72 bp | ATTTTCAGCTTTTCTGTAAGTGCCTGGAACACTGTCTaGTTTAGTCCGCACCATGTTCAAACAAGAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: IFSFSVSAWNTV*FSPHHVQTRRE Trigger: CTCTCTTCTTGTTTGAACATGGTGCGGACTAAAGCAGACAGTGTTCCAGGCACTTACAGAAAAGCTGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559519.5 |
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| CDS CAA 72 bp | GTCAAATCCTTCAGATGCTCTTTAAACCAGTCCAGTTaGAGACTCTCAAGCGTTTCTCTGTTAATAAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: VKSFRCSLNQSS*RLSSVSLLIRS Trigger: ACTCCTTATTAACAGAGAAACGCTTGAGAGTCTCAAACTGGACTGGTTTAAAGAGCATCTGAAGGATTTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559280.1 |
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