RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCIF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100982

Ensembl transcript IDs: ENST00000372409.8, ENST00000479348.2, ENST00000616084.1

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCGCTGTGGCTGCGGCCTaGCTGCCGGTAGGCAGCACT +
Preference number: 2 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSAVAAA*LPVGST
Trigger: AGTGCTGCCTACCGGCAGTCAGGCCGCAGCCACAGC...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479348.2
3UTR-3UTR TCA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGAGGAGGGAGTTTGAGGTaGGGACTTGGGGACAGGCAG +
Preference number: 2 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGGGSLR*GLGDRQ
Trigger: CTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCC...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
3UTR-3UTR CCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTCCGAGTCCCGGTCCTTaGCCTCCGAGGAGGACGATG +
Preference number: 2 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLPSPGP*PPRRTM
Trigger: CATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGG...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479348.2
3UTR-3UTR TCA 90 bp GGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGCTCCGAGGAGGACGATaGGGAAGAACCAGAGCTGTG +
Preference number: 2 (lower is better)
Translates to: GEGRGWEGIRTYIHGTWRLRGGR*GRTRAV
Trigger: CACAGCTCTGGTTCTTCCTCATCGTCCTCCTCGGAG...CCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479348.2
3UTR-3UTR CCA 90 bp AGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGTGAGGGGCGGGGTTaGGAAGGCATCAGGACCTAT +
Preference number: 2 (lower is better)
Translates to: RWQQGEGRGWEGIRTYIHGEGRG*EGIRTY
Trigger: ATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC...ATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
3UTR-3UTR CCA 90 bp GTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGCAGGGAGGGGAGCCCTaGCAGAACCATAATCTTCAT +
Preference number: 2 (lower is better)
Translates to: VRGGVGKASGPIYMGLGGQGGEP*QNHNLH
Trigger: ATGAAGATTATGGTTCTGCCAGGGCTCCCCTCCCTG...CCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
3UTR-3UTR CCA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCTATATACATGGGACTTaGAGGGAGTTTGAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSYIHGT*REFEVR
Trigger: CCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
3UTR-3UTR TCA 90 bp CAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTATTTCCTTTTACAAATaGAACAAGGTGGCAACAGGG +
Preference number: 2 (lower is better)
Translates to: QQGEGRGWEGIRTYIHGTISFYK*NKVATG
Trigger: CCCTGTTGCCACCTTGTTTCATTTGTAAAAGGAAAT...AGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
3UTR-3UTR CAA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATACCCGAGTCCCGGTCCTaGGCCTCCGAGGAGGACGAT +
Preference number: 3 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIPESRS*ASEEDD
Trigger: ATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGG...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479348.2
3UTR CAA 72 bp CGGCTAGGACCCTGCTCACGGCCCGAGTCCCGGTCCTaGGCCTCCGAGGAGGACGATGAGGAAGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: RLGPCSRPESRS*ASEEDDEEEPE
Trigger: CTCTGGTTCTTCCTCATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGGCCGTGAGCAGGGTCCTAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR TCA 90 bp TTAAGTGGGGTGAGGCTCGCGGCTAGGACCCTGCTCACGGCCCGAGTCCCGGTCAGACCATGGCATCCATaGGCTCCTCGCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSGVRLAARTLLTARVPVRPWHP*APRRRE
Trigger: CTCCCTTCTGCGAGGAGCTCATGGATGCCATGGTCT...GACCGGGACTCGGGCCGTGAGCAGGGTCCTAGCCGCGAGCCTCACCCCACTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR GCA 90 bp CAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGCTCGACCGCCCGTTTTaGCGCCTCCGCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QGEGRGWEGIRTYIHGTWLDRPF*RLRLAL
Trigger: GAGGGCGAGGCGGAGGCGGCAAAACGGGCGGTCGAG...CCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp GGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTCGCGGCTAGGACCCTaGTCACGGCCCGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GSPGRTIIFICQWQPGSLSRLGP*SRPESR
Trigger: CCGGGACTCGGGCCGTGAGCAGGGTCCTAGCCGCGA...GAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp CAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGCTGCCCGGAGCGGACTaGAGGGGACGCGGCTACACG +
Preference number: 4 (lower is better)
Translates to: QGEGRGWEGIRTYIHGTWLPGAD*RGRGYT
Trigger: CGTGTAGCCGCGTCCCCTCCAGTCCGCTCCGGGCAG...CCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTGCTGCGGCCGAGACGTaGGGGCCACACTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVAAAET*GPHCLR
Trigger: GCGGAGGCAGTGTGGCCCCCACGTCTCGGCCGCAGC...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTCACTCCTGGACTCGATaGGCCGCCTGGCGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVHSWTR*AAWRPP
Trigger: CGGAGGCCGCCAGGCGGCTCATCGAGTCCAGGAGTG...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp AGGACGATGAGGAAGAACCAGAGCTGTGGCTGCGGCCTGACTGCCGGTAGGCAGGGACAGGGGCTCCGGTaGGCTCTCAAGCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RTMRKNQSCGCGLTAGRQGQGLR*ALKQSL
Trigger: GAGAGACTGCTTGAGAGCTCACCGGAGCCCCTGTCC...CTGCCTACCGGCAGTCAGGCCGCAGCCACAGCTCTGGTTCTTCCTCATCGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR TCA 90 bp AGGACGATGAGGAAGAACCAGAGCTGTGGCTGCGGCCTGACTGCCGGTAGGCAGTCTGCTCCATGCGGGTaGGCGCTGGTGTTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: RTMRKNQSCGCGLTAGRQSAPCG*ALVLGV
Trigger: AACCCCCAACACCAGCGCTCACCCGCATGGAGCAGA...CTGCCTACCGGCAGTCAGGCCGCAGCCACAGCTCTGGTTCTTCCTCATCGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR GCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATACACGGAGTCCTTGGCTaGGGCCGAGACGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIHGVLG*GRDVGA
Trigger: GGCCCCCACGTCTCGGCCGCAGCCAAGGACTCCGTG...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp ATGTTAAGTGGGGTGAGGCTCGCGGCTAGGACCCTGCTCACGGCCCGAGTCCCGCTGGCACCCACTTCTTaGAGATGTGCTGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: MLSGVRLAARTLLTARVPLAPTS*RCAGSH
Trigger: GTGGCTCCCAGCACATCTGCAAGAAGTGGGTGCCAG...CGGGACTCGGGCCGTGAGCAGGGTCCTAGCCGCGAGCCTCACCCCACTTAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR CCA 90 bp GGCCCGAGTCCCGGTCCTTGGCCTCCGAGGAGGACGATGAGGAAGAACCAGAGCGGCAGGATCAACTGGTaGCGTTTGAAGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GPSPGPWPPRRTMRKNQSGRINW*RLKRLC
Trigger: GCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCC...GCTCTGGTTCTTCCTCATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR TCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAGCTGTGGCTGCGGCCTaGCTGCCGGTAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIAVAAA*LPVGST
Trigger: AGTGCTGCCTACCGGCAGTCAGGCCGCAGCCACAGC...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp GAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTGGCTGGGCATGGGCGGTaGAGACACAGCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: EPWQNHNLHMSVAAGVPLAGHGR*RHSQPD
Trigger: GTCCGGCTGGCTGTGTCTGCACCGCCCATGCCCAGC...CAGAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTTCGCGGCTAGGACCCTaGTCACGGCCCGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLSRLGP*SRPESR
Trigger: CCGGGACTCGGGCCGTGAGCAGGGTCCTAGCCGCGA...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGCATGCGGGTGAGCGCTaGTGTTGGGGGTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: GEGRGWEGIRTYIHGTWRHAGER*CWGFPP
Trigger: TGGCGGGAACCCCCAACACCAGCGCTCACCCGCATG...CCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp CACGGCCCGAGTCCCGGTCCTTGGCCTCCGAGGAGGACGATGAGGAAGAACCAGGGCCTCCACCTCCTCTaGGATGTTGTTTTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: HGPSPGPWPPRRTMRKNQGLHLL*DVVFLE
Trigger: CTCAAGGAAAACAACATCTCAGAGGAGGTGGAGGCC...CTGGTTCTTCCTCATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR TCA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGAGGACAGGGGCTCCGGTaGGCTCTCAAGCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGGQGLR*ALKQSL
Trigger: GAGAGACTGCTTGAGAGCTCACCGGAGCCCCTGTCC...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACGCGGCTACACGTTCTaGTCGACCGCCCGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGRGYTF*STARFA
Trigger: GGCAAAACGGGCGGTCGAGCAGAACGTGTAGCCGCG...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGCTGGGCATGGGCGGTaGAGACACAGCCAGCCGGAC +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLAGHGR*RHSQPD
Trigger: GTCCGGCTGGCTGTGTCTGCACCGCCCATGCCCAGC...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp TCACGGCCCGAGTCCCGGTCCTTGGCCTCCGAGGAGGACGATGAGGAAGAACCATGTGCTGGGAGCCACTaGGGTACTCATGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SRPESRSLASEEDDEEEPCAGSH*GTHAQR
Trigger: CCTTTGAGCATGAGTACCGCAGTGGCTCCCAGCACA...TGGTTCTTCCTCATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGGCCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR CCA 90 bp GAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTGGAGCTGGGCACCGACTaGCCTGTGGGTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: EPWQNHNLHMSVAAGVPLELGTD*PVGVTG
Trigger: CCCAGTGACACCCACAGGCCAGTCGGTGCCCAGCTC...CAGAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATACTTCCACGGAGTCCTTaGCTGCGGCCGAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPILPRSP*LRPRRG
Trigger: CCCACGTCTCGGCCGCAGCCAAGGACTCCGTGGAAG...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp AGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGTGAGCGCTGGTGTTaGGGGTTCCCGCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: RWQQGEGRGWEGIRTYIHGERWC*GFPPLR
Trigger: CCTGAGTGGCGGGAACCCCCAACACCAGCGCTCACC...ATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTCATGCGGGTGAGCGCTaGTGTTGGGGGTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVHAGER*CWGFPP
Trigger: TGGCGGGAACCCCCAACACCAGCGCTCACCCGCATG...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGGAAGAACCAGAGCTGTaGCTGCGGCCTGACTGCCGG +
Preference number: 4 (lower is better)
Translates to: VRGGVGKASGPIYMGLGGEEPEL*LRPDCR
Trigger: CCGGCAGTCAGGCCGCAGCCACAGCTCTGGTTCTTC...CCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp GGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCGAACAGGGCTGGCTCTaGTTGGAGGTACCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GSPGRTIIFICQWQPGSLEQGWL*LEVPGE
Trigger: CTCCCCAGGTACCTCCAATCAGAGCCAGCCCTGTTC...GAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp GGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGCGGGGGCAGCACCTCTaGAGGCCCCCGGTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: GVGKASGPIYMGLGGSLRRGQHL*RPPVLD
Trigger: ATCAAGCACCGGGGGCCTTCAGAGGTGCTGCCCCCG...CCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp ATGTTAAGTGGGGTGAGGCTCGCGGCTAGGACCCTGCTCACGGCCCGAGTCCCGAGGGTTGGCCTCAAATaGACCACTCAGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: MLSGVRLAARTLLTARVPRVGLK*TTQWSK
Trigger: TTTGCTCCACTGAGTGGTTCATTTGAGGCCAACCCT...CGGGACTCGGGCCGTGAGCAGGGTCCTAGCCGCGAGCCTCACCCCACTTAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR TCA 90 bp AGGACGATGAGGAAGAACCAGAGCTGTGGCTGCGGCCTGACTGCCGGTAGGCAGGACTTGGAGGGAGTTTaGGGTGAGGACTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: RTMRKNQSCGCGLTAGRQDLEGV*GEDLGT
Trigger: TGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTC...CTGCCTACCGGCAGTCAGGCCGCAGCCACAGCTCTGGTTCTTCCTCATCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR GCA 90 bp CAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTGCCCAGGGGATTCCTTaGATCAGCAGCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QQGEGRGWEGIRTYIHGTAQGIP*ISSCPE
Trigger: CTCCGGGCAGCTGCTGATGCAAGGAATCCCCTGGGC...AGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTACGTGGGGGCCACACTaGCTCCGCAGATGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLTWGPH*LRRCSR
Trigger: CCTGGAGCATCTGCGGAGGCAGTGTGGCCCCCACGT...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGCAGCACTCAGCTCCTaGAGCCGTTCAGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLAALSS*SRSGVG
Trigger: GCCGACGCCTGAACGGCTGCAGGAGCTGAGTGCTGC...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAGGGTTCCTGGGATACTaGGGGAGCTGGGCACCGACT +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIGFLGY*GSWAPT
Trigger: AGTCGGTGCCCAGCTCCCCCAGTATCCCAGGAACCC...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp AGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATTCTCCACGCTGGGCATaGGCGGTGCAGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: RWQQGEGRGWEGIRTYIHSPRWA*AVQTQP
Trigger: TGGCTGTGTCTGCACCGCCCATGCCCAGCGTGGAGA...ATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp CAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGTGTGCATCTCCACGCTaGGCATGGGCGGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: QGEGRGWEGIRTYIHGTWCASPR*AWAVQT
Trigger: TGTCTGCACCGCCCATGCCCAGCGTGGAGATGCACA...CCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp TCACGGCCCGAGTCCCGGTCCTTGGCCTCCGAGGAGGACGATGAGGAAGAACCAACGCCGAACATCATCTaGTACCGTCGGAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: SRPESRSLASEEDDEEEPTPNII*YRRRRH
Trigger: GTGTCTTCTCCGACGGTACCAGATGATGTTCGGCGT...TGGTTCTTCCTCATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGGCCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR CCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGTGAGCGCTGGTGTTaGGGGTTCCCGCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLGERWC*GFPPLR
Trigger: CCTGAGTGGCGGGAACCCCCAACACCAGCGCTCACC...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTGCGTCGGCGCCCACTTaGCAAAGCCAGGGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVASAPT*QSQGRS
Trigger: AGAACGACCCTGGCTTTGCCAAGTGGGCGCCGACGC...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp CAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGGGTGAGGGGCGGGGTTaGGAAGGCATCAGGACCTAT +
Preference number: 4 (lower is better)
Translates to: QGEGRGWEGIRTYIHGTWGEGRG*EGIRTY
Trigger: ATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC...CCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp GGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCGCCGAAGCTTCAGGATaGGCTGAGAGCGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: GSPGRTIIFICQWQPGSLAEASG*AESGAV
Trigger: AACTGCTCCGCTCTCAGCTCATCCTGAAGCTTCGGC...GAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTGTCCTCCTTGGAGGCTaGGTGGTCCTTCCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVVLLGG*VVLPKP
Trigger: TGGCTTCGGAAGGACCACTCAGCCTCCAAGGAGGAC...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp GGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCCGAAGCACTCGAAGCTaGCGCCAAAGAGTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: GSPGRTIIFICQWQPGSLRSTRS*RQRVGG
Trigger: TCCACCGACTCTTTGGCGTCAGCTTCGAGTGCTTCG...GAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp CAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGCGAAGCACTCGAAGCTaGCGCCAAAGAGTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QGEGRGWEGIRTYIHGTWRSTRS*RQRVGG
Trigger: TCCACCGACTCTTTGGCGTCAGCTTCGAGTGCTTCG...CCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGAGTAGCAGTTGAGGGGTaGGGCGAAGCACTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGVAVEG*GEALEA
Trigger: AGCTTCGAGTGCTTCGCCTCACCCCTCAACTGCTAC...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp GAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTGGGCGGAAGTAGCAGTTaGGGGGTGAGGCGAAGCACT +
Preference number: 4 (lower is better)
Translates to: EPWQNHNLHMSVAAGVPLGGSSS*GVRRST
Trigger: AGTGCTTCGCCTCACCCCTCAACTGCTACTTCCGCC...CAGAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCTCAACTGGTGGCGTTTaGAGCGGCTCTGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSSTGGV*SGSAPC
Trigger: GCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGA...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp ACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAGCTGTGGCTGCGGCCTaGCTGCCGGTAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: TYIHGTWREFEVRTWGQAAVAAA*LPVGST
Trigger: AGTGCTGCCTACCGGCAGTCAGGCCGCAGCCACAGC...TGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCCGAGGAGGACGATaGGGAAGAACCAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSLRGGR*GRTRAV
Trigger: CACAGCTCTGGTTCTTCCTCATCGTCCTCCTCGGAG...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAGGAGGGAGTTTGAGGTaGGGACTTGGGGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIGGSLR*GLGDRQ
Trigger: CTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCC...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp GAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTGGGAGGGAGTTTGAGGTaGGGACTTGGGGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: EPWQNHNLHMSVAAGVPLGGSLR*GLGDRQ
Trigger: CTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCC...CAGAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp GAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTGGCACTTCTCCCAGCCTaGATGCACCAGCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EPWQNHNLHMSVAAGVPLALLPA*MHQLLW
Trigger: CCAGAGGAGCTGGTGCATGCAGGCTGGGAGAAGTGC...CAGAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp CAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGCCTCAAAGACATaGACAGGCAGCGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: QGEGRGWEGIRTYIHGTWRASKT*TGSDPC
Trigger: GCAGGGATCGCTGCCTGTGCATGTCTTTGAGGCCCT...CCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp CAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGCTCAGCACAGGCGAATaGGCTGGTCAGCAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QGEGRGWEGIRTYIHGTWLSTGE*AGQQWS
Trigger: ACTCCACTGCTGACCAGCCCATTCGCCTGTGCTGAG...CCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACAGGCGGATTGGCTTTaGAGAACAGGGCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGQADWL*RTGLAL
Trigger: CAGAGCCAGCCCTGTTCTCCAAAGCCAATCCGCCTG...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGCACACCATTGCCGCTTaGCTGCTCTTCCGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VRGGVGKASGPIYMGLGGHTIAA*LLFREL
Trigger: CAGCTCTCGGAAGAGCAGCCAAGCGGCAATGGTGTG...CCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTTCTCCACGCTGGGCATaGGCGGTGCAGACACAGCCA +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLSPRWA*AVQTQP
Trigger: TGGCTGTGTCTGCACCGCCCATGCCCAGCGTGGAGA...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGGCAGGATCAACTGGTaGCGTTTGAAGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GEGRGWEGIRTYIHGTWRGRINW*RLKRLC
Trigger: GCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCC...CCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGCAGGCAGGATCAACTaGTGGCGTTTGAAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GEGRGWEGIRTYIHGTWRAGRIN*WRLKRL
Trigger: GAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGC...CCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGAGCAGGCAGGATCAACTaGTGGCGTTTGAAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGAGRIN*WRLKRL
Trigger: GAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGC...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp TCCTCCCCGCAGGATATGTTAAGTGGGGTGAGGCTCGCGGCTAGGACCCTGCTCCAGGGAGGGGAGCCCTaGCAGAACCATAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSPQDMLSGVRLAARTLLQGGEP*QNHNLH
Trigger: ATGAAGATTATGGTTCTGCCAGGGCTCCCCTCCCTG...GAGCAGGGTCCTAGCCGCGAGCCTCACCCCACTTAACATATCCTGCGGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR TCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTCCTCTGGGAGGTCCTaGACCAGGCGGATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVSSGRS*TRRIGF
Trigger: AAAGCCAATCCGCCTGGTTCAGGACCTCCCAGAGGA...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp GGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCAGTTTCCACCAAGCTTaGGTCTTGGGGCAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GSPGRTIIFICQWQPGSLSFHQA*VLGQWG
Trigger: ACCCCACTGCCCCAAGACTCAAGCTTGGTGGAAACT...GAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATCAACTGGTGGCGTTTaGAGCGGCTCTGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPISTGGV*SGSAPC
Trigger: GCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGA...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTCTTCCTCCCGGGGGCTaGCGTGATTCTCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLLPPGG*RDSHWP
Trigger: TGGCCAATGAGAATCACGGCAGCCCCCGGGAGGAAG...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTTTCTCCCAGCCTGCATaGACCAGCTCCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLFSQPA*TSSSGR
Trigger: CCTCCCAGAGGAGCTGGTGCATGCAGGCTGGGAGAA...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTGAAATCACATCGTGCTaGCCCAGCACGGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVEITSC*PSTGIS
Trigger: GGAGATGCCCGTGCTGGGGCAGCACGATGTGATTTC...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAAGGGCCTCAAAGACATaGACAGGCAGCGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIRASKT*TGSDPC
Trigger: GCAGGGATCGCTGCCTGTGCATGTCTTTGAGGCCCT...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp GTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGTGTGCTGGGAGCCACTaGGGTACTCATGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: VRGGVGKASGPIYMGLGGCAGSH*GTHAQR
Trigger: CCTTTGAGCATGAGTACCGCAGTGGCTCCCAGCACA...CCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp GGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGGCAGCACTCAGCTCCTaGAGCCGTTCAGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: GWEGIRTYIHGTWREFEVAALSS*SRSGVG
Trigger: GCCGACGCCTGAACGGCTGCAGGAGCTGAGTGCTGC...CACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp TATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAGGGTCTTCTCCAGCCGGATaGACCCCCACAGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: YIHGTWREFEVRTWGQAGSSPAG*TPTGSH
Trigger: GTGGGACCCTGTGGGGGTCCATCCGGCTGGAGAAGA...CCCTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTGATTGGAGGTACCTaGGGAGTGACTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSLIGGT*GVTQQG
Trigger: TCCCTGCTGAGTCACTCCCCAGGTACCTCCAATCAG...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp TATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAGGGCAGCGTTGGGGTTCCTaGGATACTGGGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YIHGTWREFEVRTWGQAGQRWGS*DTGGAG
Trigger: CCCAGCTCCCCCAGTATCCCAGGAACCCCAACGCTG...CCCTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGCTGGTTCACAGTTGCTaGGCAACAGGGGGTCAGATC +
Preference number: 4 (lower is better)
Translates to: GEGRGWEGIRTYIHGTWRLVHSC*ATGGQI
Trigger: GATCTGACCCCCTGTTGCCCAGCAACTGTGAACCAG...CCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTTGTGCATCTCCACGCTaGGCATGGGCGGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLCASPR*AWAVQT
Trigger: TGTCTGCACCGCCCATGCCCAGCGTGGAGATGCACA...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp TATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAGGGGAAGAACCAGAGCTGTaGCTGCGGCCTGACTGCCGG +
Preference number: 4 (lower is better)
Translates to: YIHGTWREFEVRTWGQAGEEPEL*LRPDCR
Trigger: CCGGCAGTCAGGCCGCAGCCACAGCTCTGGTTCTTC...CCCTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGCCGAGTCCCGGTCCTTaGCCTCCGAGGAGGACGATG +
Preference number: 4 (lower is better)
Translates to: GWEGIRTYIHGTWREFEVPSPGP*PPRRTM
Trigger: CATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGG...CACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAAGCTTCAGGATGAGCTaGGAGCGGAGCAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPISFRMS*ERSSST
Trigger: AGTGGAACTGCTCCGCTCTCAGCTCATCCTGAAGCT...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCTCTCTCGGATCCGTTTaGCGTACTCCAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSSLGSV*RTPGRC
Trigger: ACATCTCCCTGGAGTACGTCAAACGGATCCGAGAGA...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp GGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGTCTGCTCCATGCGGGTaGGCGCTGGTGTTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: GWEGIRTYIHGTWREFEVSAPCG*ALVLGV
Trigger: AACCCCCAACACCAGCGCTCACCCGCATGGAGCAGA...CACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAGACTTGGAGGGAGTTTaGGGTGAGGACTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIDLEGV*GEDLGT
Trigger: TGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTC...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTTCCGAAATCACATCGTaGTGCCCCAGCACGGGCATC +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLSEITS*CPSTGI
Trigger: GATGCCCGTGCTGGGGCAGCACGATGTGATTTCGGA...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATGCTCTTCCGAGAGCTaGCGCTTTCTGGGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPICSSES*RFLGLF
Trigger: GAACAAGCCCAGAAAGCGGCAGCTCTCGGAAGAGCA...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGAACGTTGTTCTCCATGTaGATCTCCACGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGTLFSM*ISTLGM
Trigger: CATGCCCAGCGTGGAGATGCACATGGAGAACAACGT...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp CAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTAGTGCATTTCCTCCCTaGGGGCAAAGGCAATGGCTC +
Preference number: 4 (lower is better)
Translates to: QQGEGRGWEGIRTYIHGTSAFPP*GQRQWL
Trigger: GAGCCATTGCCTTTGCCCGCAGGGAGGAAATGCACT...AGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR CCA 90 bp AGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGCACCGACTGGCCTGTaGGTGTCACTGGGATTTCAA +
Preference number: 4 (lower is better)
Translates to: RWQQGEGRGWEGIRTYIHAPTGL*VSLGFQ
Trigger: TTGAAATCCCAGTGACACCCACAGGCCAGTCGGTGC...ATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGAGGATACTGGGGGAGCTaGGCACCGACTGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGGYWGS*APTGLW
Trigger: CCACAGGCCAGTCGGTGCCCAGCTCCCCCAGTATCC...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTGCCACATCTTCAGCGTTaGGGTTCCTGGGATACTGGG +
Preference number: 4 (lower is better)
Translates to: EPWQNHNLHMSVAAGVPLPHLQR*GSWDTG
Trigger: CCCAGTATCCCAGGAACCCCAACGCTGAAGATGTGG...CAGAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAGTTGAAAGACTCCCGTaGAGGCTCAATGCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIVERLP*RLNALS
Trigger: CGAGAGGGCATTGAGCCTCCACGGGAGTCTTTCAAC...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp AGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATTCCTTGGAGGCTGAGTaGTCCTTCCGAAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: RWQQGEGRGWEGIRTYIHSLEAE*SFRSQL
Trigger: TAGCTGGCTTCGGAAGGACCACTCAGCCTCCAAGGA...ATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGCGCAGAAGGGAGGGTTaGCCTCAAATGAACCACTCA +
Preference number: 4 (lower is better)
Translates to: VRGGVGKASGPIYMGLGGRRREG*PQMNHS
Trigger: TGAGTGGTTCATTTGAGGCCAACCCTCCCTTCTGCG...CCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGCGCAGAAGGGAGGGTTaGCCTCAAATGAACCACTCA +
Preference number: 4 (lower is better)
Translates to: GEGRGWEGIRTYIHGTWRRRREG*PQMNHS
Trigger: TGAGTGGTTCATTTGAGGCCAACCCTCCCTTCTGCG...CCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCTTCTTGCAGATGTGCTaGGAGCCACTGCGGTACTCA +
Preference number: 4 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSFLQMC*EPLRYS
Trigger: TGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAA...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp TCACGGCCCGAGTCCCGGTCCTTGGCCTCCGAGGAGGACGATGAGGAAGAACCATATATACATGGGACTTaGAGGGAGTTTGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SRPESRSLASEEDDEEEPYIHGT*REFEVR
Trigger: CCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA...TGGTTCTTCCTCATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGGCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR CCA 90 bp GTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGACAAATGAAACAAGGTaGCAACAGGGTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: VRGGVGKASGPIYMGLGGTNETR*QQGEGR
Trigger: CCGCCCCTCACCCTGTTGCCACCTTGTTTCATTTGT...CCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp ACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCACCAGCATCCAGCGGTTaGAAGACTCCCGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TYIHGTWREFEVRTWGQAPASSG*KTPVEA
Trigger: AGCCTCCACGGGAGTCTTTCAACCGCTGGATGCTGG...TGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAGGCCTCCACCTCCTCTaGGATGTTGTTTTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIGLHLL*DVVFLE
Trigger: CTCAAGGAAAACAACATCTCAGAGGAGGTGGAGGCC...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACCATTGCCGCTTGGCTaGTCTTCCGAGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGPLPLG*SSESCR
Trigger: GCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCAATGG...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGCTTCTTCACACCATTaGCGCTTGGCTGCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLASSHH*RLAALP
Trigger: CGGAAGAGCAGCCAAGCGGCAATGGTGTGAAGAAGC...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTCTTTGTCTACCACCTTaGGCTCCAGCATCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLLCLPP*APASSG
Trigger: ACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAG...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTCCTACTGTCAGGGGATaGACTCCTGGACTCGATGAG +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLPTVRG*TPGLDE
Trigger: CTCATCGAGTCCAGGAGTGCATCCCCTGACAGTAGG...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAACGTTGTTCTCCATGTaGATCTCCACGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPITLFSM*ISTLGM
Trigger: CATGCCCAGCGTGGAGATGCACATGGAGAACAACGT...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp GGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGCGTTTGAAGCGGCTCTaGTCCATGCGGGTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GWEGIRTYIHGTWREFEVRLKRL*SMRVSA
Trigger: AGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACG...CACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp ACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCACGTTTGAAGCGGCTCTaGTCCATGCGGGTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: TYIHGTWREFEVRTWGQARLKRL*SMRVSA
Trigger: AGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACG...TGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp AGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGCATTTCCTCCTTCTTaGAGATGTGCTGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RWQQGEGRGWEGIRTYIHAFPPS*RCAGSH
Trigger: GTGGCTCCCAGCACATCTGCAAGAAGGAGGAAATGC...ATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp AGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGCACAGGCGAATGGGCTaGTCAGCAGTGGAGTGGACG +
Preference number: 4 (lower is better)
Translates to: RTYIHGTWREFEVRTWGQHRRMG*SAVEWT
Trigger: CGTCCACTCCACTGCTGACCAGCCCATTCGCCTGTG...CTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp TATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAGGGAGGGCTGGCTCTGATTaGAGGTACCTGGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: YIHGTWREFEVRTWGQAGRAGSD*RYLGSD
Trigger: GTCACTCCCCAGGTACCTCCAATCAGAGCCAGCCCT...CCCTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTCTGAACCAGGCGGATTaGCTTTGGAGAACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLLNQAD*LWRTGL
Trigger: CAGCCCTGTTCTCCAAAGCCAATCCGCCTGGTTCAG...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCATCTCCCACAGGGACTaGTTGGTGAATCGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSPGRTIIFICQWQPGSLISHRD*LVNRLK
Trigger: CTTCAACCGATTCACCAACCAGTCCCTGTGGGAGAT...GAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCGCCTGTGGGTGTCACTaGGATTTCAATCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSACGCH*DFNLGL
Trigger: AAGCCCAAGATTGAAATCCCAGTGACACCCACAGGC...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTACGCCGAACATCATCTaGTACCGTCGGAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVTPNII*YRRRRH
Trigger: GTGTCTTCTCCGACGGTACCAGATGATGTTCGGCGT...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTACGCCAAAGAGTCGGTaGAGGGCCTCAAAGACATGC +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLTPKSR*RASKTC
Trigger: GCATGTCTTTGAGGCCCTCCACCGACTCTTTGGCGT...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTTCTTGCAGATGTGCTaGGAGCCACTGCGGTACTCA +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVFLQMC*EPLRYS
Trigger: TGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAA...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGAGCGTCGGCGCCCACTTaGCAAAGCCAGGGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGASAPT*QSQGRS
Trigger: AGAACGACCCTGGCTTTGCCAAGTGGGCGCCGACGC...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp AGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGTAGCAGTTGAGGGGTaGGGCGAAGCACTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: RTYIHGTWREFEVRTWGQVAVEG*GEALEA
Trigger: AGCTTCGAGTGCTTCGCCTCACCCCTCAACTGCTAC...CTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGAGGCGGAAGTAGCAGTTaGGGGGTGAGGCGAAGCACT +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGGGSSS*GVRRST
Trigger: AGTGCTTCGCCTCACCCCTCAACTGCTACTTCCGCC...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp TCACGGCCCGAGTCCCGGTCCTTGGCCTCCGAGGAGGACGATGAGGAAGAACCAATTTCCTTTTACAAATaGAACAAGGTGGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: SRPESRSLASEEDDEEEPISFYK*NKVATG
Trigger: CCCTGTTGCCACCTTGTTTCATTTGTAAAAGGAAAT...TGGTTCTTCCTCATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGGCCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS-3UTR GCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTCGTAGGAGAGCTGCCTaGTGTTTATCTTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLRRRAA*CLSSGD
Trigger: GTCCCCTGAAGATAAACAGCAGGCAGCTCTCCTACG...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp CAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTAGATCTTACTGCAGATaGCTTCCACGGAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QQGEGRGWEGIRTYIHGTRSYCR*LPRSPW
Trigger: CCAAGGACTCCGTGGAAGGCATCTGCAGTAAGATCT...AGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp GAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTGCTCCCTTATACCGGATaGAGACCACGTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EPWQNHNLHMSVAAGVPLLPYTG*RPRCSP
Trigger: TGGAGAACAACGTGGTCTGCATCCGGTATAAGGGAG...CAGAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGAAGAGCTGCCGCTTTCTaGGCTTGTTCTCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGRAAAF*ACSQPG
Trigger: CCCCGGCTGAGAACAAGCCCAGAAAGCGGCAGCTCT...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp ACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCACCCAGTAGACCTCAGTaGGTCGTAGGAGAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TYIHGTWREFEVRTWGQAPSRPQ*VVGELP
Trigger: AGGCAGCTCTCCTACGACCCACTGAGGTCTACTGGG...TGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGAAGACCATGGCATCCATaGGCTCCTCGCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGRPWHP*APRRRE
Trigger: CTCCCTTCTGCGAGGAGCTCATGGATGCCATGGTCT...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGAGGACCCTCTGGGGTCTaGAACGTTAGCATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGGPSGV*NVSMRG
Trigger: GCCTCTCATGCTAACGTTGCAGACCCCAGAGGGTCC...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACGACTGGTTCACAGTTaGTGGGCAACAGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGRLVHS*WATGGQ
Trigger: CTGACCCCCTGTTGCCCAGCAACTGTGAACCAGTCG...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTAGGCAGAGTCATCAATaGAGCTGTAGCGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVRQSHQ*SCSGKG
Trigger: TCCTTTACCGCTACAGCTGCATTGATGACTCTGCCT...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp ACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCATCCTTCTTGCAGATGTaGTGGGAGCCACTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TYIHGTWREFEVRTWGQASFLQM*WEPLRY
Trigger: GTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGGA...TGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp ACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAACCAAGCTTGAGTCTTaGGGCAGTGGGGTCGCATTC +
Preference number: 4 (lower is better)
Translates to: TYIHGTWREFEVRTWGQATKLES*GSGVAF
Trigger: GAATGCGACCCCACTGCCCCAAGACTCAAGCTTGGT...TGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp GGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGACGCCAAAGAGTCGGTaGAGGGCCTCAAAGACATGC +
Preference number: 4 (lower is better)
Translates to: GWEGIRTYIHGTWREFEVTPKSR*RASKTC
Trigger: GCATGTCTTTGAGGCCCTCCACCGACTCTTTGGCGT...CACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGCAGGGAGGGGAGCCCTaGCAGAACCATAATCTTCAT +
Preference number: 4 (lower is better)
Translates to: GVGKASGPIYMGLGGSLRQGGEP*QNHNLH
Trigger: ATGAAGATTATGGTTCTGCCAGGGCTCCCCTCCCTG...CCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATAAGATGTTGTTTTCCTTaGGGATGGCAAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIRCCFP*GWQGAS
Trigger: AGAAGCACCTTGCCATCCTCAAGGAAAACAACATCT...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACCATGTAGTCCTCCTTaGAGGCTGAGTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGPCSPP*RLSGPS
Trigger: GGAAGGACCACTCAGCCTCCAAGGAGGACTACATGG...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CCA 90 bp CAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTATATACATGGGACTTaGAGGGAGTTTGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QQGEGRGWEGIRTYIHGTYIHGT*REFEVR
Trigger: CCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA...AGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp GGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGACAAATGAAACAAGGTaGCAACAGGGTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GWEGIRTYIHGTWREFEVTNETR*QQGEGR
Trigger: CCGCCCCTCACCCTGTTGCCACCTTGTTTCATTTGT...CACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp TATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAGGGTCTGCAACGTTAGCATaGGAGGCTTTTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YIHGTWREFEVRTWGQAGSATLA*EAFLLQ
Trigger: CTGGAGAAGAAAAGCCTCTCATGCTAACGTTGCAGA...CCCTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp GGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGCTTCCACATTCCATTTaGCCACCTTCCTACTGTCAG +
Preference number: 4 (lower is better)
Translates to: GVGKASGPIYMGLGGSLRLPHSI*PPSYCQ
Trigger: CTGACAGTAGGAAGGTGGTCAAATGGAATGTGGAAG...CCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp ACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAAGGGTTGGCCTCAAATaGACCACTCAGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: TYIHGTWREFEVRTWGQARVGLK*TTQWSK
Trigger: TTTGCTCCACTGAGTGGTTCATTTGAGGCCAACCCT...TGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR TCA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCATTTCCTTTTACAAATaGAACAAGGTGGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSISFYK*NKVATG
Trigger: CCCTGTTGCCACCTTGTTTCATTTGTAAAAGGAAAT...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR GCA 90 bp ACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCACTCCCTTATACCGGATaGAGACCACGTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TYIHGTWREFEVRTWGQALPYTG*RPRCSP
Trigger: TGGAGAACAACGTGGTCTGCATCCGGTATAAGGGAG...TGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CCA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTCTGGGATTTCAATCTTaGGCTTCTTCACACCATTGC +
Preference number: 4 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLLGFQS*ASSHHC
Trigger: GCAATGGTGTGAAGAAGCCCAAGATTGAAATCCCAG...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR TCA 90 bp AGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGACGAAACATGGAAGGTaGCACGACTGGTTCACAGTT +
Preference number: 4 (lower is better)
Translates to: RTYIHGTWREFEVRTWGQTKHGR*HDWFTV
Trigger: AACTGTGAACCAGTCGTGTCACCTTCCATGTTTCGT...CTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGATTGAGGATGGCAAGGTaGTTCTCTCGGATCCGTTTG +
Preference number: 4 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGLRMAR*FSRIRL
Trigger: CAAACGGATCCGAGAGAAGCACCTTGCCATCCTCAA...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR GCA 90 bp AGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGAGGCAGAGTCATCAATaGAGCTGTAGCGGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: RTYIHGTWREFEVRTWGQRQSHQ*SCSGKG
Trigger: TCCTTTACCGCTACAGCTGCATTGATGACTCTGCCT...CTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CAA 90 bp AGGACGATGAGGAAGAACCAGAGCTGTGGCTGCGGCCTGACTGCCGGTAGGCAGGGCGTCGGCGCCCACTaGGCAAAGCCAGGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: RTMRKNQSCGCGLTAGRQGVGAH*AKPGSF
Trigger: GAACGACCCTGGCTTTGCCAAGTGGGCGCCGACGCC...CTGCCTACCGGCAGTCAGGCCGCAGCCACAGCTCTGGTTCTTCCTCATCGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS CCA 90 bp GCGGATTGGCTTTGGAGAACAGGGCTGGCTCTGATTGGAGGTACCTaGGGAGTGACTCAGCAGGGACGCTTCCTCCCGGGGGCTGCCGTG +
Preference number: 5 (lower is better)
Translates to: ADWLWRTGLALIGGT*GVTQQGRFLPGAAV
Trigger: CACGGCAGCCCCCGGGAGGAAGCGTCCCTGCTGAGTCACTCCCCAGGTACCTCCAATCAGAGCCAGCCCTGTTCTCCAAAGCCAATCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTGGCCGCTGCCGCCATCTaGTGTCCCGGGCCGGGACTC +
Preference number: 5 (lower is better)
Translates to: EPWQNHNLHMSVAAGVPLAAAAI*CPGPGL
Trigger: GAGTCCCGGCCCGGGACACAAGATGGCGGCAGCGGC...CAGAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS TCA 90 bp CTCGCTGCTGGCACAGCTCCCGATAGTGCTGCCGAAGCTTCAGGATaGGCTGAGAGCGGAGCAGTTCCACTTCGGGATGCGGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LAAGTAPDSAAEASG*AESGAVPLRDAGAA
Trigger: TGCTGCCCCCGCATCCCGAAGTGGAACTGCTCCGCTCTCAGCTCATCCTGAAGCTTCGGCAGCACTATCGGGAGCTGTGCCAGCAGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 90 bp AGGTACCTGGGGAGTGACTCAGCAGGGACGCTTCCTCCCGGGGGCTaGCGTGATTCTCATTGGCCATCTCCACACCCACACAGGACCCTC +
Preference number: 5 (lower is better)
Translates to: RYLGSDSAGTLPPGG*RDSHWPSPHPHRTL
Trigger: GAGGGTCCTGTGTGGGTGTGGAGATGGCCAATGAGAATCACGGCAGCCCCCGGGAGGAAGCGTCCCTGCTGAGTCACTCCCCAGGTACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 90 bp GACTCAGCAGGGACGCTTCCTCCCGGGGGCTGCCGTGATTCTCATTaGCCATCTCCACACCCACACAGGACCCTCTGGGGTCTGCAACGT +
Preference number: 5 (lower is better)
Translates to: DSAGTLPPGGCRDSH*PSPHPHRTLWGLQR
Trigger: ACGTTGCAGACCCCAGAGGGTCCTGTGTGGGTGTGGAGATGGCCAATGAGAATCACGGCAGCCCCCGGGAGGAAGCGTCCCTGCTGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 90 bp GTGGCGTTTGAAGCGGCTCTGCTCCATGCGGGTGAGCGCTGGTGTTaGGGGTTCCCGCCACTCAGGGATGAACACGATGAAGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: VAFEAALLHAGERWC*GFPPLRDEHDEGQG
Trigger: CCCCTGTCCTTCATCGTGTTCATCCCTGAGTGGCGGGAACCCCCAACACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS TCA 90 bp CTGAGAGCGGAGCAGTTCCACTTCGGGATGCGGGGGCAGCACCTCTaGAGGCCCCCGGTGCTTGATGACAGCATTGGTCTGGATGTCCAG +
Preference number: 5 (lower is better)
Translates to: LRAEQFHFGMRGQHL*RPPVLDDSIGLDVQ
Trigger: CTGGACATCCAGACCAATGCTGTCATCAAGCACCGGGGGCCTTCAGAGGTGCTGCCCCCGCATCCCGAAGTGGAACTGCTCCGCTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 90 bp GATGTGGTAGATCTTACTGCAGATGCCTTCCACGGAGTCCTTGGCTaGGGCCGAGACGTGGGGGCCACACTGCCTCCGCAGATGCTCCAG +
Preference number: 5 (lower is better)
Translates to: DVVDLTADAFHGVLG*GRDVGATLPPQMLQ
Trigger: CTGGAGCATCTGCGGAGGCAGTGTGGCCCCCACGTCTCGGCCGCAGCCAAGGACTCCGTGGAAGGCATCTGCAGTAAGATCTACCACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 90 bp TGCTCAAAGGCAGGCAGGATCAACTGGTGGCGTTTGAAGCGGCTCTaGTCCATGCGGGTGAGCGCTGGTGTTGGGGGTTCCCGCCACTCA +
Preference number: 5 (lower is better)
Translates to: CSKAGRINWWRLKRL*SMRVSAGVGGSRHS
Trigger: TGAGTGGCGGGAACCCCCAACACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 90 bp CCTGAACCAGGCGGATTGGCTTTGGAGAACAGGGCTGGCTCTGATTaGAGGTACCTGGGGAGTGACTCAGCAGGGACGCTTCCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: PEPGGLALENRAGSD*RYLGSDSAGTLPPG
Trigger: CCCGGGAGGAAGCGTCCCTGCTGAGTCACTCCCCAGGTACCTCCAATCAGAGCCAGCCCTGTTCTCCAAAGCCAATCCGCCTGGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 90 bp GGGAGATGTGGTAGATCTTACTGCAGATGCCTTCCACGGAGTCCTTaGCTGCGGCCGAGACGTGGGGGCCACACTGCCTCCGCAGATGCT +
Preference number: 5 (lower is better)
Translates to: GRCGRSYCRCLPRSP*LRPRRGGHTASADA
Trigger: AGCATCTGCGGAGGCAGTGTGGCCCCCACGTCTCGGCCGCAGCCAAGGACTCCGTGGAAGGCATCTGCAGTAAGATCTACCACATCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 90 bp AGGCAGCACTCAGCTCCTGCAGCCGTTCAGGCGTCGGCGCCCACTTaGCAAAGCCAGGGTCGTTCTGTAGGAAGAGCACAGCCGTGTTGT +
Preference number: 5 (lower is better)
Translates to: RQHSAPAAVQASAPT*QSQGRSVGRAQPCC
Trigger: ACAACACGGCTGTGCTCTTCCTACAGAACGACCCTGGCTTTGCCAAGTGGGCGCCGACGCCTGAACGGCTGCAGGAGCTGAGTGCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS TCA 90 bp GTCGGGGAAGGCAGAACAGTACTGGCGGAAGTAGCAGTTGAGGGGTaGGGCGAAGCACTCGAAGCTGACGCCAAAGAGTCGGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VGEGRTVLAEVAVEG*GEALEADAKESVEG
Trigger: GCCCTCCACCGACTCTTTGGCGTCAGCTTCGAGTGCTTCGCCTCACCCCTCAACTGCTACTTCCGCCAGTACTGTTCTGCCTTCCCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 90 bp CACAGAGGCAAGGAAAGGCCTGCAGGAAGACTCAGCACAGGCGAATaGGCTGGTCAGCAGTGGAGTGGACGGGAGCCCAGGGGATTCCTT +
Preference number: 5 (lower is better)
Translates to: HRGKERPAGRLSTGE*AGQQWSGREPRGFL
Trigger: AAGGAATCCCCTGGGCTCCCGTCCACTCCACTGCTGACCAGCCCATTCGCCTGTGCTGAGTCTTCCTGCAGGCCTTTCCTTGCCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000616084.1
CDS CCA 90 bp TTGAGGGGTGAGGCGAAGCACTCGAAGCTGACGCCAAAGAGTCGGTaGAGGGCCTCAAAGACATGCACAGGCAGCGATCCCTGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LRGEAKHSKLTPKSR*RASKTCTGSDPCRP
Trigger: TGGCCTGCAGGGATCGCTGCCTGTGCATGTCTTTGAGGCCCTCCACCGACTCTTTGGCGTCAGCTTCGAGTGCTTCGCCTCACCCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 90 bp CAACTGGTGGCGTTTGAAGCGGCTCTGCTCCATGCGGGTGAGCGCTaGTGTTGGGGGTTCCCGCCACTCAGGGATGAACACGATGAAGGA +
Preference number: 5 (lower is better)
Translates to: QLVAFEAALLHAGER*CWGFPPLRDEHDEG
Trigger: TCCTTCATCGTGTTCATCCCTGAGTGGCGGGAACCCCCAACACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 90 bp TGGGAGCCACTGCGGTACTCATGCTCAAAGGCAGGCAGGATCAACTaGTGGCGTTTGAAGCGGCTCTGCTCCATGCGGGTGAGCGCTGGT +
Preference number: 5 (lower is better)
Translates to: WEPLRYSCSKAGRIN*WRLKRLCSMRVSAG
Trigger: ACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAGTGGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CAA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTCCTTCCACGGAGTCCTaGGCTGCGGCCGAGACGTGG +
Preference number: 5 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLPSTES*AAAETW
Trigger: CCACGTCTCGGCCGCAGCCAAGGACTCCGTGGAAGG...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 90 bp ACCATCTCTCCCTTATACCGGATGCAGACCACGTTGTTCTCCATGTaGATCTCCACGCTGGGCATGGGCGGTGCAGACACAGCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: TISPLYRMQTTLFSM*ISTLGMGGADTASR
Trigger: CCGGCTGGCTGTGTCTGCACCGCCCATGCCCAGCGTGGAGATGCACATGGAGAACAACGTGGTCTGCATCCGGTATAAGGGAGAGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS GCA 90 bp CTGCCCTCCCTGGCACCCACTTCTTGCAGATGTGCTGGGAGCCACTaGGGTACTCATGCTCAAAGGCAGGCAGGATCAACTGGTGGCGTT +
Preference number: 5 (lower is better)
Translates to: LPSLAPTSCRCAGSH*GTHAQRQAGSTGGV
Trigger: AACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGTGGGTGCCAGGGAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS CCA 90 bp GGATGCAGACCACGTTGTTCTCCATGTGCATCTCCACGCTGGGCATaGGCGGTGCAGACACAGCCAGCCGGACTGGGTAGCAGTACACTA +
Preference number: 5 (lower is better)
Translates to: GCRPRCSPCASPRWA*AVQTQPAGLGSSTL
Trigger: TAGTGTACTGCTACCCAGTCCGGCTGGCTGTGTCTGCACCGCCCATGCCCAGCGTGGAGATGCACATGGAGAACAACGTGGTCTGCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 90 bp TATACCGGATGCAGACCACGTTGTTCTCCATGTGCATCTCCACGCTaGGCATGGGCGGTGCAGACACAGCCAGCCGGACTGGGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: YTGCRPRCSPCASPR*AWAVQTQPAGLGSS
Trigger: ACTGCTACCCAGTCCGGCTGGCTGTGTCTGCACCGCCCATGCCCAGCGTGGAGATGCACATGGAGAACAACGTGGTCTGCATCCGGTATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 90 bp GAGCCACTGCGGTACTCATGCTCAAAGGCAGGCAGGATCAACTGGTaGCGTTTGAAGCGGCTCTGCTCCATGCGGGTGAGCGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: EPLRYSCSKAGRINW*RLKRLCSMRVSAGV
Trigger: AACACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAGTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CAA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCTGCCGCTTTCTGGGCTaGTTCTCAGCCGGGGGAGTT +
Preference number: 5 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSCRFLG*FSAGGV
Trigger: AACTCCCCCGGCTGAGAACAAGCCCAGAAAGCGGCA...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACCTTTGTCTACCACCTaGCGCTCCAGCATCCAGCGG +
Preference number: 5 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGPLSTT*RSSIQR
Trigger: CCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAGG...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGCCCGAGTCCCGGTCCTaGGCCTCCGAGGAGGACGAT +
Preference number: 5 (lower is better)
Translates to: GVGKASGPIYMGLGGSLRPESRS*ASEEDD
Trigger: ATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGG...CCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS TCA 90 bp GGTCAGATCCTTTGTCTACCACCTTGCGCTCCAGCATCCAGCGGTTaGAAGACTCCCGTGGAGGCTCAATGCCCTCTCGCTGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: GQILCLPPCAPASSG*KTPVEAQCPLAAGT
Trigger: TGTGCCAGCAGCGAGAGGGCATTGAGCCTCCACGGGAGTCTTTCAACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAGGATCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 90 bp GGCACCCACTTCTTGCAGATGTGCTGGGAGCCACTGCGGTACTCATaGTCAAAGGCAGGCAGGATCAACTGGTGGCGTTTGAAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: GTHFLQMCWEPLRYS*SKAGRINWWRLKRL
Trigger: GAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGTGGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS CCA 90 bp ATGCACCAGCTCCTCTGGGAGGTCCTGAACCAGGCGGATTGGCTTTaGAGAACAGGGCTGGCTCTGATTGGAGGTACCTGGGGAGTGACT +
Preference number: 5 (lower is better)
Translates to: MHQLLWEVLNQADWL*RTGLALIGGTWGVT
Trigger: AGTCACTCCCCAGGTACCTCCAATCAGAGCCAGCCCTGTTCTCCAAAGCCAATCCGCCTGGTTCAGGACCTCCCAGAGGAGCTGGTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp CAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGGAGTTTCCACCAAGCTaGAGTCTTGGGGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: QGEGRGWEGIRTYIHGTWEFPPS*SLGAVG
Trigger: CCCCACTGCCCCAAGACTCAAGCTTGGTGGAAACTC...CCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGCCCACATCTTCAGCGTaGGGGTTCCTGGGATACTGG +
Preference number: 5 (lower is better)
Translates to: GEGRGWEGIRTYIHGTWRPTSSA*GFLGYW
Trigger: CCAGTATCCCAGGAACCCCAACGCTGAAGATGTGGG...CCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATCCAGCATCCAGCGGTaGAAAGACTCCCGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: KQGGNRVRGGVGKASGPISSIQR*KDSRGG
Trigger: GCCTCCACGGGAGTCTTTCAACCGCTGGATGCTGGA...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGAGGGGGTCAGATCCTTaGTCTACCACCTTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GEGRGWEGIRTYIHGTWRRGSDP*STTLRS
Trigger: GGAGCGCAAGGTGGTAGACAAAGGATCTGACCCCCT...CCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGAACGACTGGTTCACAGTaGCTGGGCAACAGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGTTGSQ*LGNRGS
Trigger: TGACCCCCTGTTGCCCAGCAACTGTGAACCAGTCGT...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGGGCGTCGGCGCCCACTaGGCAAAGCCAGGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: GWEGIRTYIHGTWREFEVGVGAH*AKPGSF
Trigger: GAACGACCCTGGCTTTGCCAAGTGGGCGCCGACGCC...CACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 90 bp TCACACCATTGCCGCTTGGCTGCTCTTCCGAGAGCTGCCGCTTTCTaGGCTTGTTCTCAGCCGGGGGAGTTTCCACCAAGCTTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SHHCRLAALPRAAAF*ACSQPGEFPPSLSL
Trigger: AAGACTCAAGCTTGGTGGAAACTCCCCCGGCTGAGAACAAGCCCAGAAAGCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCAATGGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 90 bp TTGGGGTTCCTGGGATACTGGGGGAGCTGGGCACCGACTGGCCTGTaGGTGTCACTGGGATTTCAATCTTGGGCTTCTTCACACCATTGC +
Preference number: 5 (lower is better)
Translates to: LGFLGYWGSWAPTGL*VSLGFQSWASSHHC
Trigger: GCAATGGTGTGAAGAAGCCCAAGATTGAAATCCCAGTGACACCCACAGGCCAGTCGGTGCCCAGCTCCCCCAGTATCCCAGGAACCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 90 bp TTCAGCGTTGGGGTTCCTGGGATACTGGGGGAGCTGGGCACCGACTaGCCTGTGGGTGTCACTGGGATTTCAATCTTGGGCTTCTTCACA +
Preference number: 5 (lower is better)
Translates to: FSVGVPGILGELGTD*PVGVTGISILGFFT
Trigger: TGTGAAGAAGCCCAAGATTGAAATCCCAGTGACACCCACAGGCCAGTCGGTGCCCAGCTCCCCCAGTATCCCAGGAACCCCAACGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp AGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATTCACACCATTGCCGCTaGGCTGCTCTTCCGAGAGCT +
Preference number: 5 (lower is better)
Translates to: RWQQGEGRGWEGIRTYIHSHHCR*AALPRA
Trigger: AGCTCTCGGAAGAGCAGCCAAGCGGCAATGGTGTGA...ATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp CAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTGGCTTCTTCACACCATaGCCGCTTGGCTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QQGEGRGWEGIRTYIHGTGFFTP*PLGCSS
Trigger: GGAAGAGCAGCCAAGCGGCAATGGTGTGAAGAAGCC...AGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GAGGGGAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCTCGCAGAAGGGAGGGTaGGCCTCAAATGAACCACTC +
Preference number: 5 (lower is better)
Translates to: EGSPGRTIIFICQWQPGSSQKGG*ASNEPL
Trigger: GAGTGGTTCATTTGAGGCCAACCCTCCCTTCTGCGA...GGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CAA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACCCGAGTCCCGGTCCTaGGCCTCCGAGGAGGACGAT +
Preference number: 5 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGPESRS*ASEEDD
Trigger: ATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGG...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS GCA 90 bp ACTGGGATTTCAATCTTGGGCTTCTTCACACCATTGCCGCTTGGCTaGTCTTCCGAGAGCTGCCGCTTTCTGGGCTTGTTCTCAGCCGGG +
Preference number: 5 (lower is better)
Translates to: TGISILGFFTPLPLG*SSESCRFLGLFSAG
Trigger: CCCGGCTGAGAACAAGCCCAGAAAGCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCAATGGTGTGAAGAAGCCCAAGATTGAAATCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp TATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAGGGCCAGGCGGATTGGCTTaGGAGAACAGGGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: YIHGTWREFEVRTWGQAGPGGLA*ENRAGS
Trigger: AGAGCCAGCCCTGTTCTCCAAAGCCAATCCGCCTGG...CCCTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGATGCTTGATGACAGCATaGGTCTGGATGTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GNRVRGGVGKASGPIYMGCLMTA*VWMSRS
Trigger: GGACCTGGACATCCAGACCAATGCTGTCATCAAGCA...TCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp AAACAAGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATACGGATGCAGACCACGTaGTTCTCCATGTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: KQGGNRVRGGVGKASGPIRMQTT*FSMCIS
Trigger: GGAGATGCACATGGAGAACAACGTGGTCTGCATCCG...TATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CAA 90 bp GAGCCCTGGCAGAACCATAATCTTCATATGTCAGTGGCAGCCGGGGTCCCTCTGCGGATGCAGACCACGTaGTTCTCCATGTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: EPWQNHNLHMSVAAGVPLRMQTT*FSMCIS
Trigger: GGAGATGCACATGGAGAACAACGTGGTCTGCATCCG...CAGAGGGACCCCGGCTGCCACTGACATATGAAGATTATGGTTCTGCCAGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS GCA 90 bp ATTTCCTCCTTCTTGCAGATGTGCTGGGAGCCACTGCGGTACTCATaGTCAAAGGCAGGCAGGATCAACTGGTGGCGTTTGAAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: ISSFLQMCWEPLRYS*SKAGRINWWRLKRL
Trigger: GAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGGAGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp TATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGACAGGCAGGGCCTGAACCAGGCGGATaGGCTTTGGAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: YIHGTWREFEVRTWGQAGPEPGG*ALENRA
Trigger: AGCCCTGTTCTCCAAAGCCAATCCGCCTGGTTCAGG...CCCTGCCTGTCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 90 bp CCTTGTAGTGCATTTCCTCCTTCTTGCAGATGTGCTGGGAGCCACTaGGGTACTCATGCTCAAAGGCAGGCAGGATCAACTGGTGGCGTT +
Preference number: 5 (lower is better)
Translates to: PCSAFPPSCRCAGSH*GTHAQRQAGSTGGV
Trigger: AACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGGAGGAAATGCACTACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 90 bp TGTCACTGGGATTTCAATCTTGGGCTTCTTCACACCATTGCCGCTTaGCTGCTCTTCCGAGAGCTGCCGCTTTCTGGGCTTGTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: CHWDFNLGLLHTIAA*LLFRELPLSGLVLS
Trigger: GCTGAGAACAAGCCCAGAAAGCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCAATGGTGTGAAGAAGCCCAAGATTGAAATCCCAGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTTTCTCTCGGATCCGTTaGACGTACTCCAGGGAGATG +
Preference number: 5 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLFSRIR*TYSREM
Trigger: CATCTCCCTGGAGTACGTCAAACGGATCCGAGAGAA...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS TCA 90 bp GTGAGCTCTCAAGCAGTCTCTCAAAGTGAGAGACCATGGCATCCATaGGCTCCTCGCAGAAGGGAGGGTTGGCCTCAAATGAACCACTCA +
Preference number: 5 (lower is better)
Translates to: VSSQAVSQSERPWHP*APRRREGWPQMNHS
Trigger: TGAGTGGTTCATTTGAGGCCAACCCTCCCTTCTGCGAGGAGCTCATGGATGCCATGGTCTCTCACTTTGAGAGACTGCTTGAGAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CAA 90 bp AACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGCTTCCTCCCGGAACTaGATTCGGGATAACCTGATA +
Preference number: 5 (lower is better)
Translates to: NRVRGGVGKASGPIYMGLASSRN*IRDNLI
Trigger: TATCAGGTTATCCCGAATCAAGTTCCGGGAGGAAGC...AAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGTCTTCCACATTCCATTaGACCACCTTCCTACTGTCA +
Preference number: 5 (lower is better)
Translates to: GEGRGWEGIRTYIHGTWRSSTFH*TTFLLS
Trigger: TGACAGTAGGAAGGTGGTCAAATGGAATGTGGAAGA...CCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTGAGATGTTGTTTTCCTaGAGGATGGCAAGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GAGLGRHQDLYTWDLEGVEMLFS*RMARCF
Trigger: GAAGCACCTTGCCATCCTCAAGGAAAACAACATCTC...AACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp GGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGATCAACTGGTGGCGTTaGAAGCGGCTCTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: GWEGIRTYIHGTWREFEVINWWR*KRLCSM
Trigger: CATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGAT...CACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CAA 90 bp AGGTGGCAACAGGGTGAGGGGCGGGGTTGGGAAGGCATCAGGACCTATATACATACTGGGATTTCAATCTaGGGCTTCTTCACACCATTG +
Preference number: 5 (lower is better)
Translates to: RWQQGEGRGWEGIRTYIHTGISI*GFFTPL
Trigger: CAATGGTGTGAAGAAGCCCAAGATTGAAATCCCAGT...ATGTATATAGGTCCTGATGCCTTCCCAACCCCGCCCCTCACCCTGTTGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS-3UTR CAA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGATCGCAGAAGGGAGGGTaGGCCTCAAATGAACCACTC +
Preference number: 5 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGSQKGG*ASNEPL
Trigger: GAGTGGTTCATTTGAGGCCAACCCTCCCTTCTGCGA...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CAA 90 bp ATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGAGGACTTGGGGAATCAACTGGTGGCGTTaGAAGCGGCTCTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: IRTYIHGTWREFEVRTWGINWWR*KRLCSM
Trigger: CATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGAT...TCCCCAAGTCCTCACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS-3UTR CAA 90 bp GGTTGGGAAGGCATCAGGACCTATATACATGGGACTTGGAGGGAGTTTGAGGTGTGCATTTCCTCCTTCTaGCAGATGTGCTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: GWEGIRTYIHGTWREFEVCISSF*QMCWEP
Trigger: TGGCTCCCAGCACATCTGCAAGAAGGAGGAAATGCA...CACCTCAAACTCCCTCCAAGTCCCATGTATATAGGTCCTGATGCCTTCCCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp GGGGACGCGGCTACACGTTCTGCTCGACCGCCCGTTTaGCCGCCTCCGCCTCGCCCTCCCCAGCGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: GDAATRSARPPV*PPPPRPPQRRC
Trigger: GCAGCGGCGCTGGGGAGGGCGAGGCGGAGGCGGCAAAACGGGCGGTCGAGCAGAACGTGTAGCCGCGTCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 72 bp CCCGGAGCGGACTGGAGGGGACGCGGCTACACGTTCTaGTCGACCGCCCGTTTTGCCGCCTCCGCCTCGCCC +
Preference number: 6 (lower is better)
Translates to: PGADWRGRGYTF*STARFAASASP
Trigger: GGGCGAGGCGGAGGCGGCAAAACGGGCGGTCGAGCAGAACGTGTAGCCGCGTCCCCTCCAGTCCGCTCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp GGGGATTCCTTGCATCAGCAGCTGCCCGGAGCGGACTaGAGGGGACGCGGCTACACGTTCTGCTCGACCGCC +
Preference number: 6 (lower is better)
Translates to: GDSLHQQLPGAD*RGRGYTFCSTA
Trigger: GGCGGTCGAGCAGAACGTGTAGCCGCGTCCCCTCCAGTCCGCTCCGGGCAGCTGCTGATGCAAGGAATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000616084.1
CDS CCA 72 bp ATGCCTTCCACGGAGTCCTTGGCTGCGGCCGAGACGTaGGGGCCACACTGCCTCCGCAGATGCTCCAGGCGA +
Preference number: 6 (lower is better)
Translates to: MPSTESLAAAET*GPHCLRRCSRR
Trigger: TCGCCTGGAGCATCTGCGGAGGCAGTGTGGCCCCCACGTCTCGGCCGCAGCCAAGGACTCCGTGGAAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp GGGACGCTTCCTCCCGGGGGCTGCCGTGATTCTCATTaGCCATCTCCACACCCACACAGGACCCTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: GTLPPGGCRDSH*PSPHPHRTLWG
Trigger: ACCCCAGAGGGTCCTGTGTGGGTGTGGAGATGGCCAATGAGAATCACGGCAGCCCCCGGGAGGAAGCGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 72 bp GGGAGTGACTCAGCAGGGACGCTTCCTCCCGGGGGCTaGCGTGATTCTCATTGGCCATCTCCACACCCACAC +
Preference number: 6 (lower is better)
Translates to: GSDSAGTLPPGG*RDSHWPSPHPH
Trigger: GTGTGGGTGTGGAGATGGCCAATGAGAATCACGGCAGCCCCCGGGAGGAAGCGTCCCTGCTGAGTCACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 72 bp CTGACGCCAAAGAGTCGGTGGAGGGCCTCAAAGACATaGACAGGCAGCGATCCCTGCAGGCCAGTCCCCTCG +
Preference number: 6 (lower is better)
Translates to: LTPKSRWRASKT*TGSDPCRPVPS
Trigger: CGAGGGGACTGGCCTGCAGGGATCGCTGCCTGTGCATGTCTTTGAGGCCCTCCACCGACTCTTTGGCGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS GCA 72 bp GCAGGCAGGATCAACTGGTGGCGTTTGAAGCGGCTCTaGTCCATGCGGGTGAGCGCTGGTGTTGGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: AGRINWWRLKRL*SMRVSAGVGGS
Trigger: GGAACCCCCAACACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 72 bp CCACGTTGTTCTCCATGTGCATCTCCACGCTGGGCATaGGCGGTGCAGACACAGCCAGCCGGACTGGGTAGC +
Preference number: 6 (lower is better)
Translates to: PRCSPCASPRWA*AVQTQPAGLGS
Trigger: GCTACCCAGTCCGGCTGGCTGTGTCTGCACCGCCCATGCCCAGCGTGGAGATGCACATGGAGAACAACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 72 bp GCGTTTGAAGCGGCTCTGCTCCATGCGGGTGAGCGCTaGTGTTGGGGGTTCCCGCCACTCAGGGATGAACAC +
Preference number: 6 (lower is better)
Translates to: AFEAALLHAGER*CWGFPPLRDEH
Trigger: GTGTTCATCCCTGAGTGGCGGGAACCCCCAACACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS TCA 72 bp GAGCAGTTCCACTTCGGGATGCGGGGGCAGCACCTCTaGAGGCCCCCGGTGCTTGATGACAGCATTGGTCTG +
Preference number: 6 (lower is better)
Translates to: EQFHFGMRGQHL*RPPVLDDSIGL
Trigger: CAGACCAATGCTGTCATCAAGCACCGGGGGCCTTCAGAGGTGCTGCCCCCGCATCCCGAAGTGGAACTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp AAGGCCTGCAGGAAGACTCAGCACAGGCGAATGGGCTaGTCAGCAGTGGAGTGGACGGGAGCCCAGGGGATT +
Preference number: 6 (lower is better)
Translates to: KACRKTQHRRMG*SAVEWTGAQGI
Trigger: AATCCCCTGGGCTCCCGTCCACTCCACTGCTGACCAGCCCATTCGCCTGTGCTGAGTCTTCCTGCAGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000616084.1
CDS CCA 72 bp AAGGAAAGGCCTGCAGGAAGACTCAGCACAGGCGAATaGGCTGGTCAGCAGTGGAGTGGACGGGAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: KERPAGRLSTGE*AGQQWSGREPR
Trigger: CCTGGGCTCCCGTCCACTCCACTGCTGACCAGCCCATTCGCCTGTGCTGAGTCTTCCTGCAGGCCTTTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000616084.1
CDS CCA 72 bp CTTTGGAGAACAGGGCTGGCTCTGATTGGAGGTACCTaGGGAGTGACTCAGCAGGGACGCTTCCTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: LWRTGLALIGGT*GVTQQGRFLPG
Trigger: CCCCGGGAGGAAGCGTCCCTGCTGAGTCACTCCCCAGGTACCTCCAATCAGAGCCAGCCCTGTTCTCCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp TGCCGCTTGGCTGCTCTTCCGAGAGCTGCCGCTTTCTaGGCTTGTTCTCAGCCGGGGGAGTTTCCACCAAGC +
Preference number: 6 (lower is better)
Translates to: CRLAALPRAAAF*ACSQPGEFPPS
Trigger: GCTTGGTGGAAACTCCCCCGGCTGAGAACAAGCCCAGAAAGCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp GGGGTTCCTGGGATACTGGGGGAGCTGGGCACCGACTaGCCTGTGGGTGTCACTGGGATTTCAATCTTGGGC +
Preference number: 6 (lower is better)
Translates to: GVPGILGELGTD*PVGVTGISILG
Trigger: GCCCAAGATTGAAATCCCAGTGACACCCACAGGCCAGTCGGTGCCCAGCTCCCCCAGTATCCCAGGAACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp CTTGCGCTCCAGCATCCAGCGGTTGAAAGACTCCCGTaGAGGCTCAATGCCCTCTCGCTGCTGGCACAGCTC +
Preference number: 6 (lower is better)
Translates to: LALQHPAVERLP*RLNALSLLAQL
Trigger: GAGCTGTGCCAGCAGCGAGAGGGCATTGAGCCTCCACGGGAGTCTTTCAACCGCTGGATGCTGGAGCGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp TGCAGACCACGTTGTTCTCCATGTGCATCTCCACGCTaGGCATGGGCGGTGCAGACACAGCCAGCCGGACTG +
Preference number: 6 (lower is better)
Translates to: CRPRCSPCASPR*AWAVQTQPAGL
Trigger: CAGTCCGGCTGGCTGTGTCTGCACCGCCCATGCCCAGCGTGGAGATGCACATGGAGAACAACGTGGTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 72 bp GAAGCGGCTCTGCTCCATGCGGGTGAGCGCTGGTGTTaGGGGTTCCCGCCACTCAGGGATGAACACGATGAA +
Preference number: 6 (lower is better)
Translates to: EAALLHAGERWC*GFPPLRDEHDE
Trigger: TTCATCGTGTTCATCCCTGAGTGGCGGGAACCCCCAACACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 72 bp TCAGCTCCTGCAGCCGTTCAGGCGTCGGCGCCCACTTaGCAAAGCCAGGGTCGTTCTGTAGGAAGAGCACAG +
Preference number: 6 (lower is better)
Translates to: SAPAAVQASAPT*QSQGRSVGRAQ
Trigger: CTGTGCTCTTCCTACAGAACGACCCTGGCTTTGCCAAGTGGGCGCCGACGCCTGAACGGCTGCAGGAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CAA 72 bp CTCAGCTCCTGCAGCCGTTCAGGCGTCGGCGCCCACTaGGCAAAGCCAGGGTCGTTCTGTAGGAAGAGCACA +
Preference number: 6 (lower is better)
Translates to: LSSCSRSGVGAH*AKPGSFCRKST
Trigger: TGTGCTCTTCCTACAGAACGACCCTGGCTTTGCCAAGTGGGCGCCGACGCCTGAACGGCTGCAGGAGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CAA 90 bp CCATTGCCGCTTGGCTGCTCTTCCGAGAGCTGCCGCTTTCTGGGCTaGTTCTCAGCCGGGGGAGTTTCCACCAAGCTTGAGTCTTGGGGC +
Preference number: 6 (lower is better)
Translates to: PLPLGCSSESCRFLG*FSAGGVSTKLESWG
Trigger: GCCCCAAGACTCAAGCTTGGTGGAAACTCCCCCGGCTGAGAACAAGCCCAGAAAGCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 90 bp CTGCGGTACTCATGCTCAAAGGCAGGCAGGATCAACTGGTGGCGTTaGAAGCGGCTCTGCTCCATGCGGGTGAGCGCTGGTGTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: LRYSCSKAGRINWWR*KRLCSMRVSAGVGG
Trigger: ACCCCCAACACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS TCA 72 bp GGCACAGCTCCCGATAGTGCTGCCGAAGCTTCAGGATaGGCTGAGAGCGGAGCAGTTCCACTTCGGGATGCG +
Preference number: 6 (lower is better)
Translates to: GTAPDSAAEASG*AESGAVPLRDA
Trigger: CGCATCCCGAAGTGGAACTGCTCCGCTCTCAGCTCATCCTGAAGCTTCGGCAGCACTATCGGGAGCTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 72 bp GCATTCAGCCCCAAAGGGTCCGAAATCACATCGTGCTaGCCCAGCACGGGCATCTCCCACAGGGACTGGTTG +
Preference number: 6 (lower is better)
Translates to: AFSPKGSEITSC*PSTGISHRDWL
Trigger: CAACCAGTCCCTGTGGGAGATGCCCGTGCTGGGGCAGCACGATGTGATTTCGGACCCTTTGGGGCTGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp TCTTCAGCGTTGGGGTTCCTGGGATACTGGGGGAGCTaGGCACCGACTGGCCTGTGGGTGTCACTGGGATTT +
Preference number: 6 (lower is better)
Translates to: SSALGFLGYWGS*APTGLWVSLGF
Trigger: AAATCCCAGTGACACCCACAGGCCAGTCGGTGCCCAGCTCCCCCAGTATCCCAGGAACCCCAACGCTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp GAGGCGAAGCACTCGAAGCTGACGCCAAAGAGTCGGTaGAGGGCCTCAAAGACATGCACAGGCAGCGATCCC +
Preference number: 6 (lower is better)
Translates to: EAKHSKLTPKSR*RASKTCTGSDP
Trigger: GGGATCGCTGCCTGTGCATGTCTTTGAGGCCCTCCACCGACTCTTTGGCGTCAGCTTCGAGTGCTTCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CAA 90 bp CATGCACCAGCTCCTCTGGGAGGTCCTGAACCAGGCGGATTGGCTTaGGAGAACAGGGCTGGCTCTGATTGGAGGTACCTGGGGAGTGAC +
Preference number: 6 (lower is better)
Translates to: HAPAPLGGPEPGGLA*ENRAGSDWRYLGSD
Trigger: GTCACTCCCCAGGTACCTCCAATCAGAGCCAGCCCTGTTCTCCAAAGCCAATCCGCCTGGTTCAGGACCTCCCAGAGGAGCTGGTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 90 bp GGGTCAGATCCTTTGTCTACCACCTTGCGCTCCAGCATCCAGCGGTaGAAAGACTCCCGTGGAGGCTCAATGCCCTCTCGCTGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: GSDPLSTTLRSSIQR*KDSRGGSMPSRCWH
Trigger: GTGCCAGCAGCGAGAGGGCATTGAGCCTCCACGGGAGTCTTTCAACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAGGATCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp CTCCTCTGGGAGGTCCTGAACCAGGCGGATTGGCTTTaGAGAACAGGGCTGGCTCTGATTGGAGGTACCTGG +
Preference number: 6 (lower is better)
Translates to: LLWEVLNQADWL*RTGLALIGGTW
Trigger: CCAGGTACCTCCAATCAGAGCCAGCCCTGTTCTCCAAAGCCAATCCGCCTGGTTCAGGACCTCCCAGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CCA 72 bp CGGTACTCATGCTCAAAGGCAGGCAGGATCAACTGGTaGCGTTTGAAGCGGCTCTGCTCCATGCGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: RYSCSKAGRINW*RLKRLCSMRVS
Trigger: GCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 72 bp CTGCGGTACTCATGCTCAAAGGCAGGCAGGATCAACTaGTGGCGTTTGAAGCGGCTCTGCTCCATGCGGGTG +
Preference number: 6 (lower is better)
Translates to: LRYSCSKAGRIN*WRLKRLCSMRV
Trigger: CACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CAA 72 bp GCTCCTCTGGGAGGTCCTGAACCAGGCGGATTGGCTTaGGAGAACAGGGCTGGCTCTGATTGGAGGTACCTG +
Preference number: 6 (lower is better)
Translates to: APLGGPEPGGLA*ENRAGSDWRYL
Trigger: CAGGTACCTCCAATCAGAGCCAGCCCTGTTCTCCAAAGCCAATCCGCCTGGTTCAGGACCTCCCAGAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp CTTGGCTGCTCTTCCGAGAGCTGCCGCTTTCTGGGCTaGTTCTCAGCCGGGGGAGTTTCCACCAAGCTTGAG +
Preference number: 6 (lower is better)
Translates to: LGCSSESCRFLG*FSAGGVSTKLE
Trigger: CTCAAGCTTGGTGGAAACTCCCCCGGCTGAGAACAAGCCCAGAAAGCGGCAGCTCTCGGAAGAGCAGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp CCTTTGTCTACCACCTTGCGCTCCAGCATCCAGCGGTaGAAAGACTCCCGTGGAGGCTCAATGCCCTCTCGC +
Preference number: 6 (lower is better)
Translates to: PLSTTLRSSIQR*KDSRGGSMPSR
Trigger: GCGAGAGGGCATTGAGCCTCCACGGGAGTCTTTCAACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp TCATGCTCAAAGGCAGGCAGGATCAACTGGTGGCGTTaGAAGCGGCTCTGCTCCATGCGGGTGAGCGCTGGT +
Preference number: 6 (lower is better)
Translates to: SCSKAGRINWWR*KRLCSMRVSAG
Trigger: ACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CAA 90 bp CGGCTGACCTTGACCATCTCTCCCTTATACCGGATGCAGACCACGTaGTTCTCCATGTGCATCTCCACGCTGGGCATGGGCGGTGCAGAC +
Preference number: 6 (lower is better)
Translates to: RLTLTISPLYRMQTT*FSMCISTLGMGGAD
Trigger: GTCTGCACCGCCCATGCCCAGCGTGGAGATGCACATGGAGAACAACGTGGTCTGCATCCGGTATAAGGGAGAGATGGTCAAGGTCAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CAA 90 bp TCACAGTTGCTGGGCAACAGGGGGTCAGATCCTTTGTCTACCACCTaGCGCTCCAGCATCCAGCGGTTGAAAGACTCCCGTGGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: SQLLGNRGSDPLSTT*RSSIQRLKDSRGGS
Trigger: TGAGCCTCCACGGGAGTCTTTCAACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAGGATCTGACCCCCTGTTGCCCAGCAACTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS TCA 72 bp CTTTGTCTACCACCTTGCGCTCCAGCATCCAGCGGTTaGAAGACTCCCGTGGAGGCTCAATGCCCTCTCGCT +
Preference number: 6 (lower is better)
Translates to: LCLPPCAPASSG*KTPVEAQCPLA
Trigger: AGCGAGAGGGCATTGAGCCTCCACGGGAGTCTTTCAACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS TCA 72 bp GGCAGAACAGTACTGGCGGAAGTAGCAGTTGAGGGGTaGGGCGAAGCACTCGAAGCTGACGCCAAAGAGTCG +
Preference number: 6 (lower is better)
Translates to: GRTVLAEVAVEG*GEALEADAKES
Trigger: CGACTCTTTGGCGTCAGCTTCGAGTGCTTCGCCTCACCCCTCAACTGCTACTTCCGCCAGTACTGTTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS GCA 72 bp CGTACTCCAGGGAGATGTGGTAGATCTTACTGCAGATaGCTTCCACGGAGTCCTTGGCTGCGGCCGAGACGT +
Preference number: 6 (lower is better)
Translates to: RTPGRCGRSYCR*LPRSPWLRPRR
Trigger: ACGTCTCGGCCGCAGCCAAGGACTCCGTGGAAGGCATCTGCAGTAAGATCTACCACATCTCCCTGGAGTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 72 bp CCCTTATACCGGATGCAGACCACGTTGTTCTCCATGTaGATCTCCACGCTGGGCATGGGCGGTGCAGACACA +
Preference number: 6 (lower is better)
Translates to: PLYRMQTTLFSM*ISTLGMGGADT
Trigger: TGTGTCTGCACCGCCCATGCCCAGCGTGGAGATGCACATGGAGAACAACGTGGTCTGCATCCGGTATAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CCA 72 bp CTGGGATACTGGGGGAGCTGGGCACCGACTGGCCTGTaGGTGTCACTGGGATTTCAATCTTGGGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: LGYWGSWAPTGL*VSLGFQSWASS
Trigger: TGAAGAAGCCCAAGATTGAAATCCCAGTGACACCCACAGGCCAGTCGGTGCCCAGCTCCCCCAGTATCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp CTGGGCAACAGGGGGTCAGATCCTTTGTCTACCACCTaGCGCTCCAGCATCCAGCGGTTGAAAGACTCCCGT +
Preference number: 6 (lower is better)
Translates to: LGNRGSDPLSTT*RSSIQRLKDSR
Trigger: ACGGGAGTCTTTCAACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAGGATCTGACCCCCTGTTGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp GGTTCACAGTTGCTGGGCAACAGGGGGTCAGATCCTTaGTCTACCACCTTGCGCTCCAGCATCCAGCGGTTG +
Preference number: 6 (lower is better)
Translates to: GSQLLGNRGSDP*STTLRSSIQRL
Trigger: CAACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAGGATCTGACCCCCTGTTGCCCAGCAACTGTGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 90 bp GACACGACTGGTTCACAGTTGCTGGGCAACAGGGGGTCAGATCCTTaGTCTACCACCTTGCGCTCCAGCATCCAGCGGTTGAAAGACTCC +
Preference number: 6 (lower is better)
Translates to: DTTGSQLLGNRGSDP*STTLRSSIQRLKDS
Trigger: GGAGTCTTTCAACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAGGATCTGACCCCCTGTTGCCCAGCAACTGTGAACCAGTCGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 72 bp CTGGCACCCACTTCTTGCAGATGTGCTGGGAGCCACTaGGGTACTCATGCTCAAAGGCAGGCAGGATCAACT +
Preference number: 6 (lower is better)
Translates to: LAPTSCRCAGSH*GTHAQRQAGST
Trigger: AGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGTGGGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479348.2
CDS CAA 90 bp TCGATGAGCCGCCTGGCGGCCTCCGCATATTTAAAGAGCAGGCGCTaGGCTTCCTCCCGGAACTTGATTCGGGATAACCTGATAGGAATG +
Preference number: 6 (lower is better)
Translates to: SMSRLAASAYLKSRR*ASSRNLIRDNLIGM
Trigger: CATTCCTATCAGGTTATCCCGAATCAAGTTCCGGGAGGAAGCCAAGCGCCTGCTCTTTAAATATGCGGAGGCCGCCAGGCGGCTCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS TCA 72 bp ATGCTCCAGGCGATCCATGTAGTCCTCCTTGGAGGCTaGGTGGTCCTTCCGAAGCCAGCTAAAGGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: MLQAIHVVLLGG*VVLPKPAKGVF
Trigger: GAAGACACCTTTAGCTGGCTTCGGAAGGACCACTCAGCCTCCAAGGAGGACTACATGGATCGCCTGGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp TTGACCATCTCTCCCTTATACCGGATGCAGACCACGTaGTTCTCCATGTGCATCTCCACGCTGGGCATGGGC +
Preference number: 6 (lower is better)
Translates to: LTISPLYRMQTT*FSMCISTLGMG
Trigger: GCCCATGCCCAGCGTGGAGATGCACATGGAGAACAACGTGGTCTGCATCCGGTATAAGGGAGAGATGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS CAA 90 bp GTGTCACTGGGATTTCAATCTTGGGCTTCTTCACACCATTGCCGCTaGGCTGCTCTTCCGAGAGCTGCCGCTTTCTGGGCTTGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: VSLGFQSWASSHHCR*AALPRAAAFWACSQ
Trigger: CTGAGAACAAGCCCAGAAAGCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCAATGGTGTGAAGAAGCCCAAGATTGAAATCCCAGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS TCA 72 bp CAAGCAGTCTCTCAAAGTGAGAGACCATGGCATCCATaGGCTCCTCGCAGAAGGGAGGGTTGGCCTCAAATG +
Preference number: 6 (lower is better)
Translates to: QAVSQSERPWHP*APRRREGWPQM
Trigger: CATTTGAGGCCAACCCTCCCTTCTGCGAGGAGCTCATGGATGCCATGGTCTCTCACTTTGAGAGACTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372409.8
ENST00000479348.2
CDS GCA 72 bp TCACTGGGATTTCAATCTTGGGCTTCTTCACACCATTaGCGCTTGGCTGCTCTTCCGAGAGCTGCCGCTTTC +
Preference number: 6 (lower is better)
Translates to: SLGFQSWASSHH*RLAALPRAAAF
Trigger: GAAAGCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCAATGGTGTGAAGAAGCCCAAGATTGAAATCCCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 72 bp GCATTTCCTCCTTCTTGCAGATGTGCTGGGAGCCACTaGGGTACTCATGCTCAAAGGCAGGCAGGATCAACT +
Preference number: 6 (lower is better)
Translates to: AFPPSCRCAGSH*GTHAQRQAGST
Trigger: AGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGGAGGAAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp GTCACTGGGATTTCAATCTTGGGCTTCTTCACACCATaGCCGCTTGGCTGCTCTTCCGAGAGCTGCCGCTTT +
Preference number: 6 (lower is better)
Translates to: VTGISILGFFTP*PLGCSSESCRF
Trigger: AAAGCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCAATGGTGTGAAGAAGCCCAAGATTGAAATCCCAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 90 bp GAGTGGTCCTTCCGAAGCCAGCTAAAGGTGTCTTCCACATTCCATTaGACCACCTTCCTACTGTCAGGGGATGCACTCCTGGACTCGATG +
Preference number: 6 (lower is better)
Translates to: EWSFRSQLKVSSTFH*TTFLLSGDALLDSM
Trigger: CATCGAGTCCAGGAGTGCATCCCCTGACAGTAGGAAGGTGGTCAAATGGAATGTGGAAGACACCTTTAGCTGGCTTCGGAAGGACCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS GCA 72 bp CACGAAACATGGAAGGTGACACGACTGGTTCACAGTTaGTGGGCAACAGGGGGTCAGATCCTTTGTCTACCA +
Preference number: 6 (lower is better)
Translates to: HETWKVTRLVHS*WATGGQILCLP
Trigger: TGGTAGACAAAGGATCTGACCCCCTGTTGCCCAGCAACTGTGAACCAGTCGTGTCACCTTCCATGTTTCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp TCACGAAACATGGAAGGTGACACGACTGGTTCACAGTaGCTGGGCAACAGGGGGTCAGATCCTTTGTCTACC +
Preference number: 6 (lower is better)
Translates to: SRNMEGDTTGSQ*LGNRGSDPLST
Trigger: GGTAGACAAAGGATCTGACCCCCTGTTGCCCAGCAACTGTGAACCAGTCGTGTCACCTTCCATGTTTCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 90 bp TTCATGATTTCACGAAACATGGAAGGTGACACGACTGGTTCACAGTaGCTGGGCAACAGGGGGTCAGATCCTTTGTCTACCACCTTGCGC +
Preference number: 6 (lower is better)
Translates to: FMISRNMEGDTTGSQ*LGNRGSDPLSTTLR
Trigger: GCGCAAGGTGGTAGACAAAGGATCTGACCCCCTGTTGCCCAGCAACTGTGAACCAGTCGTGTCACCTTCCATGTTTCGTGAAATCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp TTCCGAAGCCAGCTAAAGGTGTCTTCCACATTCCATTaGACCACCTTCCTACTGTCAGGGGATGCACTCCTG +
Preference number: 6 (lower is better)
Translates to: FRSQLKVSSTFH*TTFLLSGDALL
Trigger: CAGGAGTGCATCCCCTGACAGTAGGAAGGTGGTCAAATGGAATGTGGAAGACACCTTTAGCTGGCTTCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS TCA 72 bp AGGAATGTCGTTCATGATTTCACGAAACATGGAAGGTaGCACGACTGGTTCACAGTTGCTGGGCAACAGGGG +
Preference number: 6 (lower is better)
Translates to: RNVVHDFTKHGR*HDWFTVAGQQG
Trigger: CCCCTGTTGCCCAGCAACTGTGAACCAGTCGTGTCACCTTCCATGTTTCGTGAAATCATGAACGACATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS CAA 72 bp TATTTAAAGAGCAGGCGCTTGGCTTCCTCCCGGAACTaGATTCGGGATAACCTGATAGGAATGTCGTTCATG +
Preference number: 6 (lower is better)
Translates to: YLKSRRLASSRN*IRDNLIGMSFM
Trigger: CATGAACGACATTCCTATCAGGTTATCCCGAATCAAGTTCCGGGAGGAAGCCAAGCGCCTGCTCTTTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372409.8
CDS TCA 72 bp TGGTTGTTGATGACATCATACGAATCATTGGGACACTaGTTTTATTGTACACTCCATCATAGACGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: WLLMTSYESLGH*FYCTLHHRRLP
Trigger: AGGAAGACGTCTATGATGGAGTGTACAATAAAATCAGTGTCCCAATGATTCGTATGATGTCATCAACAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616084.1