RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCGF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000185619

Ensembl transcript IDs: ENST00000362003.9, ENST00000400151.6, ENST00000419774.5, ENST00000427463.5, ENST00000430644.5, ENST00000433814.5, ENST00000440452.5, ENST00000470161.6, ENST00000475288.5, ENST00000482726.5, ENST00000484141.5, ENST00000620529.1

Found 585 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCACAAGCACGTGGGGTCCAAGGCACCAGGACCCAGGCAGGACTaGGGTGGCCCCACAGCGTGGCCCGAGGCATCACTGGCTGACGGG +
Preference number: 1 (lower is better)
Translates to: GHKHVGSKAPGPRQD*GGPTAWPEASLADG
Trigger: CCCGTCAGCCAGTGATGCCTCGGGCCACGCTGTGGGGCCACCTCAGTCCTGCCTGGGTCCTGGTGCCTTGGACCCCACGTGCTTGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CCA 90 bp AAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTaGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTG +
Preference number: 1 (lower is better)
Translates to: KRGGREHPRVRGPSL*ALCGTIHSKSILGL
Trigger: CAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR GCA 90 bp CCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTaGGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCA +
Preference number: 1 (lower is better)
Translates to: PEAMFLSAAAGSTQG*EGPVCGRCVAPFTA
Trigger: TGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR GCA 90 bp GGGCTGAGCAGCGGATCCACTTCCGCTTCAGCCCGCGCAGTTTGCTaGTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTGCGGT +
Preference number: 1 (lower is better)
Translates to: GLSSGSTSASARAVC*CYTPGRCSPARRCG
Trigger: ACCGCAGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAAGCGGAAGTGGATCCGCTGCTCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR GCA 90 bp CCTGGGCTGAGCAGCGGATCCACTTCCGCTTCAGCCCGCGCAGTTTaGTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTGC +
Preference number: 1 (lower is better)
Translates to: PGLSSGSTSASARAV*CCYTPGRCSPARRC
Trigger: GCAGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAAGCGGAAGTGGATCCGCTGCTCAGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR CCA 90 bp ACACGGCCTCTGGTCTACCTGCTGAGCATGTCAGAAATCCCGACGTaGCGTCTGGGGCCCCGTTTCCAGGGCTGGGTGTGTCAGCCACAG +
Preference number: 1 (lower is better)
Translates to: TRPLVYLLSMSEIPT*RLGPRFQGWVCQPQ
Trigger: CTGTGGCTGACACACCCAGCCCTGGAAACGGGGCCCCAGACGCCACGTCGGGATTTCTGACATGCTCAGCAGGTAGACCAGAGGCCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR CCA 90 bp CCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTaGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGCAG +
Preference number: 1 (lower is better)
Translates to: PGAPKGARAQSVGAV*HHSQQVHLGSVVQQ
Trigger: CTGCTGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR TCA 90 bp GGCGTCTGGGGCCCCGTTTCCAGGGCTGGGTGTGTCAGCCACAGGTaGGCGACAGTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATG +
Preference number: 1 (lower is better)
Translates to: GVWGPVSRAGCVSHR*ATVLSESKCRPHTM
Trigger: CATTGTGTGAGGTCGGCACTTGGACTCACTCAGAACTGTCGCTCACCTGTGGCTGACACACCCAGCCCTGGAAACGGGGCCCCAGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR GCA 90 bp CTGGGCATGAGCCCGAAGCCACCACCAGCAAATCCTCCCCACGGATaGCAGGAGAGCTCTGATCCTAACCACCACCACCTCTCCCTTCAG +
Preference number: 1 (lower is better)
Translates to: LGMSPKPPPANPPHG*QESSDPNHHHLSLQ
Trigger: CTGAAGGGAGAGGTGGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTGGTGGCTTCGGGCTCATGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR GCA 90 bp AGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTaGCTGGAGCATCACTCTCCCTGCAAGGCTGAAGCACGGGGTGGG +
Preference number: 1 (lower is better)
Translates to: SKQRELVSEGDSEPC*LEHHSPCKAEARGG
Trigger: CCCACCCCGTGCTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
3UTR CCA 90 bp GGTGGTTGGCTTCTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTaGGCTCCCAAGGAGTGGAGGGAGGAGGGATTCAGTTCCACAGGA +
Preference number: 1 (lower is better)
Translates to: GGWLLGKPEWWPRTT*APKEWREEGFSSTG
Trigger: TCCTGTGGAACTGAATCCCTCCTCCCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAGAAGCCAACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR GCA 90 bp CAACCAACTGAGGCTGAAACACAGATTCAGCTGAAATGCAGCTTCTaGAGAGCGGGGGCCGGCTTCCCTCCTAGCCCTTCAGCTGCTCAC +
Preference number: 1 (lower is better)
Translates to: QPTEAETQIQLKCSF*RAGAGFPPSPSAAH
Trigger: GTGAGCAGCTGAAGGGCTAGGAGGGAAGCCGGCCCCCGCTCTGCAGAAGCTGCATTTCAGCTGAATCTGTGTTTCAGCCTCAGTTGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR TCA 90 bp TTCCAGGGCTGGGTGTGTCAGCCACAGGTGAGCGACAGTTCTGAGTaGGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAG +
Preference number: 1 (lower is better)
Translates to: FQGWVCQPQVSDSSE*VQVPTSHNERRTSQ
Trigger: CTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAACTGTCGCTCACCTGTGGCTGACACACCCAGCCCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR CCA 90 bp GGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTaGAGGGAGGAGGGATTCAGTTCCACAGGAAATAAATGGGAACAG +
Preference number: 1 (lower is better)
Translates to: GKPEWWPRTTWAPKE*REEGFSSTGNKWEQ
Trigger: CTGTTCCCATTTATTTCCTGTGGAACTGAATCCCTCCTCCCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR TCA 90 bp CCCAGGTGTGAGTCCTCTAACACCAAAGCACAGACTCATCAGGTGTaGGGACGCACATCAGGTGTGAAGAACACACTGGAAGGTTCCCCT +
Preference number: 1 (lower is better)
Translates to: PRCESSNTKAQTHQV*GRTSGVKNTLEGSP
Trigger: AGGGGAACCTTCCAGTGTGTTCTTCACACCTGATGTGCGTCCTCACACCTGATGAGTCTGTGCTTTGGTGTTAGAGGACTCACACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR CCA 90 bp ACATATGTAGCATGCATGTGTGTGTGTGCGGCCAGGCTGCCTGAGTaGTCCATCCAATACCCACAGCATTGCTCATCCCATGAGCAAGTC +
Preference number: 1 (lower is better)
Translates to: TYVACMCVCAARLPE*SIQYPQHCSSHEQV
Trigger: GACTTGCTCATGGGATGAGCAATGCTGTGGGTATTGGATGGACCACTCAGGCAGCCTGGCCGCACACACACACATGCATGCTACATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CCA 90 bp GGCGCCTTGAATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTaGTCCTTGCCCAGGATCTCCTCGTTGCATAAAATGTCCAGCTCG +
Preference number: 1 (lower is better)
Translates to: GALNLHLVTTTNLSV*SLPRISSLHKMSSS
Trigger: CGAGCTGGACATTTTATGCAACGAGGAGATCCTGGGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430644.5
3UTR GCA 90 bp TGTGCGGCCAGGCTGCCTGAGTGGTCCATCCAATACCCACAGCATTaGTCATCCCATGAGCAAGTCATCTCTCATGCTCATACAAATGAT +
Preference number: 1 (lower is better)
Translates to: CAARLPEWSIQYPQH*SSHEQVISHAHTND
Trigger: ATCATTTGTATGAGCATGAGAGATGACTTGCTCATGGGATGAGCAATGCTGTGGGTATTGGATGGACCACTCAGGCAGCCTGGCCGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CCA 90 bp GCCTTCTTGAATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTaGTCCTTGCCCAGGATCTCCTCGTTGCATAAAATGTCCAGCTCG +
Preference number: 1 (lower is better)
Translates to: AFLNLHLVTTTNLSV*SLPRISSLHKMSSS
Trigger: CGAGCTGGACATTTTATGCAACGAGGAGATCCTGGGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR TCA 90 bp CAGCTTCTGAAAGGAAACATCTTGCCGTTCTGGTCTCAGGAGCAATaGGAAGGTTTTAATTGCCCCGTCAATGGGCTTCCTCAAAGAGGC +
Preference number: 1 (lower is better)
Translates to: QLLKGNILPFWSQEQ*EGFNCPVNGLPQRG
Trigger: GCCTCTTTGAGGAAGCCCATTGACGGGGCAATTAAAACCTTCTCATTGCTCCTGAGACCAGAACGGCAAGATGTTTCCTTTCAGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR TCA 90 bp CATACAAAAGTTATAAATATTCTCTATTCAGAAGTCTGGTCCACATaGCACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACC +
Preference number: 1 (lower is better)
Translates to: HTKVINILYSEVWST*HPEAMFLSAAAGST
Trigger: GGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCTGAATAGAGAATATTTATAACTTTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
3UTR TCA 90 bp GAACAAGTAATTTTTAAAAGTAAGAGTTGTTCCGTAAACCAGCACTaGGCTGGTCACACGGCCTCTGGTCTACCTGCTGAGCATGTCAGA +
Preference number: 1 (lower is better)
Translates to: EQVIFKSKSCSVNQH*AGHTASGLPAEHVR
Trigger: TCTGACATGCTCAGCAGGTAGACCAGAGGCCGTGTGACCAGCTCAGTGCTGGTTTACGGAACAACTCTTACTTTTAAAAATTACTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR TCA 90 bp CTACACTTGAGGCTTATCATGAAACCTAAAATTCATAAACTAAACTaGAGTGAATTCAGATTTTCAAGACCTGGAAAGCAAGCAGAGGGA +
Preference number: 1 (lower is better)
Translates to: LHLRLIMKPKIHKLN*SEFRFSRPGKQAEG
Trigger: TCCCTCTGCTTGCTTTCCAGGTCTTGAAAATCTGAATTCACTTCAGTTTAGTTTATGAATTTTAGGTTTCATGATAAGCCTCAAGTGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
3UTR-3UTR CCA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGAGGGGGTGGCTCTGGTaGATCACAATCCTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVRGWLW*ITILQV
Trigger: CACCTGCAGGATTGTGATCCACCAGAGCCACCCCCT...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR GCA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGAATCCTCCCCACGGATaGCAGGAGAGCTCTGATCCT +
Preference number: 2 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVNPPHG*QESSDP
Trigger: AGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATT...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR GCA 90 bp CGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTCTGATGGATGGCACCTaGCCGTCAGCGGTAGCCACA +
Preference number: 2 (lower is better)
Translates to: RTQRSSTPAGPPAMGPQVLMDGT*PSAVAT
Trigger: TGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAG...AACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CCA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGGAGGACGATCGGCTCTaGGAGACTGTGAAGTGTTTT +
Preference number: 2 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVEDDRL*ETVKCF
Trigger: AAAACACTTCACAGTCTCCCAGAGCCGATCGTCCTC...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
3UTR-3UTR TCA 90 bp TGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTCTCTCCCTGCAAGGCTaGAGCACGGGGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: CEGPVCGRCVAPFTASPSLSLQG*STGWGG
Trigger: CCCGCCCCACCCCGTGCTTCAGCCTTGCAGGGAGAG...AGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CCA 90 bp CACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGTGGCCAAGGACCACCTaGGCTCCCAAGGAGTGGAGG +
Preference number: 2 (lower is better)
Translates to: HPEAMFLSAAAGSTQGCEWPRTT*APKEWR
Trigger: CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCA...CTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CCA 90 bp AGCTTCTGCAGAGCGGGGGCCGGCTTCCCTCCTAGCCCTTCAGCTGCTCACCCTTGCAAGACGGTCGCCTaGGCTGAGCAGCGGATCCAC +
Preference number: 2 (lower is better)
Translates to: SFCRAGAGFPPSPSAAHPCKTVA*AEQRIH
Trigger: GTGGATCCGCTGCTCAGCCCAGGCGACCGTCTTGCA...AGGGTGAGCAGCTGAAGGGCTAGGAGGGAAGCCGGCCCCCGCTCTGCAGAAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR-3UTR GCA 90 bp AGCTTCTGCAGAGCGGGGGCCGGCTTCCCTCCTAGCCCTTCAGCTGCTCACCCTCTGAAATGCAGCTTCTaGAGAGCGGGGGCCGGCTTC +
Preference number: 2 (lower is better)
Translates to: SFCRAGAGFPPSPSAAHPLKCSF*RAGAGF
Trigger: GAAGCCGGCCCCCGCTCTGCAGAAGCTGCATTTCAG...AGGGTGAGCAGCTGAAGGGCTAGGAGGGAAGCCGGCCCCCGCTCTGCAGAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CCA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGTCCCGACGTGGCGTCTaGGGCCCCGTTTCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRSRRGV*GPVSRA
Trigger: AGCCCTGGAAACGGGGCCCCAGACGCCACGTCGGGA...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CCA 90 bp GGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCCGGCTCCTCAGCCTGATGGATaGCACCTGCCCGTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: GRCSPARRCGGSRCPPPAPQPDG*HLPVSG
Trigger: ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGG...AGCCGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR CAA 90 bp GCCTGGGCTGAGCAGCGGATCCACTTCCGCTTCAGCCCGCGCAGTTaGCTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTG +
Preference number: 2 (lower is better)
Translates to: AWAEQRIHFRFSPRS*LLLHSRQMLTCSSL
Trigger: CAGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAAGCGGAAGTGGATCCGCTGCTCAGCCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR TCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCTCTCCCTGCAAGGCTaGAGCACGGGGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSLSLQG*STGWGG
Trigger: CCCGCCCCACCCCGTGCTTCAGCCTTGCAGGGAGAG...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
3UTR-3UTR TCA 90 bp CCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCCGGCCGACCTCACACAATaGAAGGCGAACCAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: PGRCSPARRCGGSRCPPPADLTQ*KANQSG
Trigger: CCCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGC...CGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR-3UTR TCA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCGGTGGAGAAGACAATaGCAACTGCAGGACAACACC +
Preference number: 2 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSRWRRQ*QLQDNT
Trigger: GGTGTTGTCCTGCAGTTGTCATTGTCTTCTCCACCG...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CCA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGTGGCCAAGGACCACCTaGGCTCCCAAGGAGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRWPRTT*APKEWR
Trigger: CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCA...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR CAA 90 bp GAAAGGAAAGAAGGCCGCCCAGAGGCTCCACAGACGGCAGGGCCATaGCGCTCCAGCCTCCAACGACTAAGGCTGCAAGGTCAGACGAGA +
Preference number: 2 (lower is better)
Translates to: ERKEGRPEAPQTAGP*RSSLQRLRLQGQTR
Trigger: TCTCGTCTGACCTTGCAGCCTTAGTCGTTGGAGGCTGGAGCGCAATGGCCCTGCCGTCTGTGGAGCCTCTGGGCGGCCTTCTTTCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR-3UTR TCA 90 bp GTTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCGAGTGTGTCTGGGCATaGGCCCGAAGCCACCACCAG +
Preference number: 2 (lower is better)
Translates to: VTKAGSPLAEDIDTGATRECVWA*ARSHHQ
Trigger: CTGGTGGTGGCTTCGGGCTCATGCCCAGACACACTC...GCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR-3UTR TCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGGACAGACGGGGCAGTaGGTGTGTCTGGGCATGAGC +
Preference number: 2 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRGQTGQ*VCLGMS
Trigger: GCTCATGCCCAGACACACTCACTGCCCCGTCTGTCC...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR TCA 90 bp AGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGGGTGAGCGACAGTTCTaGGTGAGTCCAAGTGCCGAC +
Preference number: 2 (lower is better)
Translates to: SLVHMTPRGNVLKRGGREGERQF*VSPSAD
Trigger: GTCGGCACTTGGACTCACTCAGAACTGTCGCTCACC...CTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR TCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTAGCCGAGCCTCAGCCTaGTGGATGGCACCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITSRASA*WMAPAR
Trigger: ACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCT...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR TCA 90 bp GGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATGAACACGGGCGTCTCTaGGCTCGTTTCTGTGCAGAT +
Preference number: 2 (lower is better)
Translates to: GARAQSVGAVWHHSQQVHEHGRL*ARFCAD
Trigger: ATCTGCACAGAAACGAGCTCAGAGACGCCCGTGTTC...ATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR GCA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCACCCACCCCATCGGCGTaGTCCACTGAACACGGGCGT +
Preference number: 2 (lower is better)
Translates to: CGRCVAPFTASPSWVCSAPTPSA*STEHGR
Trigger: ACGCCCGTGTTCAGTGGAGCACGCCGATGGGGTGGG...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CCA 90 bp AGCTTCTGCAGAGCGGGGGCCGGCTTCCCTCCTAGCCCTTCAGCTGCTCACCCTAAGGTGACAGAGCTGTaGGTCATCAGAACATGGGCT +
Preference number: 2 (lower is better)
Translates to: SFCRAGAGFPPSPSAAHPKVTEL*VIRTWA
Trigger: AGCCCATGTTCTGATGACCCACAGCTCTGTCACCTT...AGGGTGAGCAGCTGAAGGGCTAGGAGGGAAGCCGGCCCCCGCTCTGCAGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR-3UTR TCA 90 bp CCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCCGGACGCACATCAGGTGTaGAGAACACACTGGAAGGTT +
Preference number: 2 (lower is better)
Translates to: PGRCSPARRCGGSRCPPPDAHQV*RTHWKV
Trigger: AACCTTCCAGTGTGTTCTTCACACCTGATGTGCGTC...CGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR TCA 90 bp ACTCCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTTGCATGGTTCTGTCATaGCCGATGTACTGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: TPGRCSPARRCGGSRCPPCMVLS*PMYCRG
Trigger: CCCCCTGCAGTACATCGGTCATGACAGAACCATGCA...AGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR GCA 90 bp TGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTAATCCTCCCCACGGATaGCAGGAGAGCTCTGATCCT +
Preference number: 2 (lower is better)
Translates to: CEGPVCGRCVAPFTASPSNPPHG*QESSDP
Trigger: AGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATT...AGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR-3UTR GCA 90 bp AGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGTGCTCACCCTGTCCCTaGAGCTCTGAAAAACGCCCT +
Preference number: 2 (lower is better)
Translates to: SLVHMTPRGNVLKRGGRECSPCP*SSEKRP
Trigger: AGGGCGTTTTTCAGAGCTGCAGGGACAGGGTGAGCA...CTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR GCA 90 bp CCCGCGCAGTTTGCTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTTGCTCACCCTGTCCCTaGAGCTCTGAAAAACGCCCT +
Preference number: 2 (lower is better)
Translates to: PAQFAAVTLQADAHLLVACSPCP*SSEKRP
Trigger: AGGGCGTTTTTCAGAGCTGCAGGGACAGGGTGAGCA...AGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR-3UTR CCA 90 bp GAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTCAGAAATCCCGACGTaGCGTCTGGGGCCCCGTTTC +
Preference number: 2 (lower is better)
Translates to: ELVSEGDSEPCCLEHHSPSEIPT*RLGPRF
Trigger: GAAACGGGGCCCCAGACGCCACGTCGGGATTTCTGA...GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CCA 90 bp AGCTTCTGCAGAGCGGGGGCCGGCTTCCCTCCTAGCCCTTCAGCTGCTCACCCTTCCACAGGAAATAAATaGGAACAGCCCGGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: SFCRAGAGFPPSPSAAHPSTGNK*EQPGGE
Trigger: TTCTCCACCGGGCTGTTCCCATTTATTTCCTGTGGA...AGGGTGAGCAGCTGAAGGGCTAGGAGGGAAGCCGGCCCCCGCTCTGCAGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR TCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCGCTCGTGTCAGAAGGTaGCTCAGAACCGTGTTGCCT +
Preference number: 2 (lower is better)
Translates to: HQQILPTDARRALILTTTARVRR*LRTVLP
Trigger: AGGCAACACGGTTCTGAGTCACCTTCTGACACGAGC...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR TCA 90 bp CCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCCGTGGTCTCAGGAGCAATaGGAAGGTTTTAATTGCCCC +
Preference number: 2 (lower is better)
Translates to: PGRCSPARRCGGSRCPPPWSQEQ*EGFNCP
Trigger: GGGGCAATTAAAACCTTCTCATTGCTCCTGAGACCA...CGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR GCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCGACTCAGAACCGTGTTaGCTGGAGCATCACTCTCCC +
Preference number: 2 (lower is better)
Translates to: HQQILPTDARRALILTTTDSEPC*LEHHSP
Trigger: GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTC...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CCA 90 bp GAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGGGCTCCCAAGGAGTaGAGGGAGGAGGGATTCAGT +
Preference number: 2 (lower is better)
Translates to: ELVSEGDSEPCCLEHHSPWAPKE*REEGFS
Trigger: ACTGAATCCCTCCTCCCTCCACTCCTTGGGAGCCCA...GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CCA 90 bp AGCTCCTGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCCCTCAGCCTGATGGATaGCACCTGCCCGTCAGCGGT +
Preference number: 2 (lower is better)
Translates to: SSCRLSSKHRCVRRASRAPQPDG*HLPVSG
Trigger: ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGG...GGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCAGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR TCA 90 bp TCCTCCAGGTACTTCACCAGGCAGCTCCTGCAGACTGTCATCAAAGCACAGGTGGGTGAGCGACAGTTCTaGGTGAGTCCAAGTGCCGAC +
Preference number: 2 (lower is better)
Translates to: SSRYFTRQLLQTVIKAQVGERQF*VSPSAD
Trigger: GTCGGCACTTGGACTCACTCAGAACTGTCGCTCACC...CACCTGTGCTTTGATGACAGTCTGCAGGAGCTGCCTGGTGAAGTACCTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR-3UTR GCA 90 bp GTTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCAGATTCAGCTGAAATaGAGCTTCTGCAGAGCGGGG +
Preference number: 2 (lower is better)
Translates to: VTKAGSPLAEDIDTGATRQIQLK*SFCRAG
Trigger: CCCCGCTCTGCAGAAGCTGCATTTCAGCTGAATCTG...GCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR-3UTR GCA 90 bp CGATGGGAATCTAAGTGCTGTTTTGCAGAGCAGGTCTCCCCCTTGATGTCTCCCCTGATGGATGGCACCTaGCCGTCAGCGGTAGCCACA +
Preference number: 2 (lower is better)
Translates to: RWESKCCFAEQVSPLMSPLMDGT*PSAVAT
Trigger: TGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAG...GGGAGACATCAAGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATTCCCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR GCA 90 bp AGCGGCGCCTTGAATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTGGTCCGCCCGCGCAGTTTGCTaGTGTTACACTCCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SGALNLHLVTTTNLSVWSARAVC*CYTPGR
Trigger: TCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGC...GGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGGCGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430644.5
3UTR-3UTR TCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTTGTGTCAGCCACAGGTaGGCGACAGTTCTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITCVSHR*ATVLSE
Trigger: CTCACTCAGAACTGTCGCTCACCTGTGGCTGACACA...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR TCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTTCCGTAAACCAGCACTaGGCTGGTCACACGGCCTCT +
Preference number: 2 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRSVNQH*AGHTAS
Trigger: AGAGGCCGTGTGACCAGCTCAGTGCTGGTTTACGGA...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR-3UTR TCA 90 bp GAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCCGGTGGAGAAGACAATaGCAACTGCAGGACAACACC +
Preference number: 2 (lower is better)
Translates to: ELVSEGDSEPCCLEHHSPRWRRQ*QLQDNT
Trigger: GGTGTTGTCCTGCAGTTGTCATTGTCTTCTCCACCG...GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR TCA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCACAGACTCATCAGGTGTaGGGACGCACATCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: CGRCVAPFTASPSWVCSAQTHQV*GRTSGV
Trigger: CACACCTGATGTGCGTCCTCACACCTGATGAGTCTG...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR TCA 90 bp TGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCAGGGCGCAGACTCATCAGGTGTaGGGACGCACATCAGGTGTG +
Preference number: 2 (lower is better)
Translates to: CRLSSKHRCVRRASRARAQTHQV*GRTSGV
Trigger: CACACCTGATGTGCGTCCTCACACCTGATGAGTCTG...CGCCCTGGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR GCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTGACTCAGAACCGTGTTaGCTGGAGCATCACTCTCCC +
Preference number: 2 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSDSEPC*LEHHSP
Trigger: GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTC...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
3UTR-3UTR GCA 90 bp TCACCATTCCGATGGGAATCTAAGTGCTGTTTTGCAGAGCAGGTCTCCCCCTTGCTGATGGATGGCACCTaGCCGTCAGCGGTAGCCACA +
Preference number: 2 (lower is better)
Translates to: SPFRWESKCCFAEQVSPLLMDGT*PSAVAT
Trigger: TGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAG...CAAGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATTCCCATCGGAATGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CCA 90 bp CGCCTTGAATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTGGTCCTTGCCTGCAGGGGGTGGCTCTaGTGGATCACAATCCTGCAG +
Preference number: 2 (lower is better)
Translates to: RLESPPSDNHELECVVLACRGWL*WITILQ
Trigger: CTGCAGGATTGTGATCCACCAGAGCCACCCCCTGCA...GGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430644.5
3UTR-3UTR GCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCCTGAGTGAGTCCAAGTaGCGACCTCACACAATGAAA +
Preference number: 2 (lower is better)
Translates to: HQQILPTDARRALILTTTLSESK*RPHTMK
Trigger: TTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAG...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR CAA 90 bp AGCAGGAGCGGCGCCTTGAATCTCCACCTAGTGACAACCACGAACTaGAGTGTGTGGTCCTTGCCCAGGATCTCCTCGTTGCATAAAATG +
Preference number: 2 (lower is better)
Translates to: SRSGALNLHLVTTTN*SVWSLPRISSLHKM
Trigger: CATTTTATGCAACGAGGAGATCCTGGGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGGCGCCGCTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430644.5
3UTR-3UTR TCA 90 bp AAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGGACGCACATCAGGTGTaGAGAACACACTGGAAGGTT +
Preference number: 2 (lower is better)
Translates to: KVTQNRVAWSITLPARLKDAHQV*RTHWKV
Trigger: AACCTTCCAGTGTGTTCTTCACACCTGATGTGCGTC...CTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR TCA 90 bp CCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCCGCTTTGTCCTAAAAGATaGCAGTATCTTCTACGTACA +
Preference number: 2 (lower is better)
Translates to: PGRCSPARRCGGSRCPPPLCPKR*QYLLRT
Trigger: TGTACGTAGAAGATACTGTCATCTTTTAGGACAAAG...CGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR CAA 90 bp AGGAGCGGCGCCTTCTTGAATCTCCACCTAGTGACAACCACGAACTaGAGTGTGTGGTCCTTGCCCAGGATCTCCTCGTTGCATAAAATG +
Preference number: 2 (lower is better)
Translates to: RSGAFLNLHLVTTTN*SVWSLPRISSLHKM
Trigger: CATTTTATGCAACGAGGAGATCCTGGGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGAAGGCGCCGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR-3UTR GCA 90 bp GAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCGAAGACAATGACAACTaGAGGACAACACCTCAACCA +
Preference number: 2 (lower is better)
Translates to: ELVSEGDSEPCCLEHHSPEDNDN*RTTPQP
Trigger: TGGTTGAGGTGTTGTCCTGCAGTTGTCATTGTCTTC...GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTTCCACAGGAAATAAATaGGAACAGCCCGGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITSTGNK*EQPGGE
Trigger: TTCTCCACCGGGCTGTTCCCATTTATTTCCTGTGGA...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR CAA 90 bp TTGAATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTGGTCCTaGCCCAGGATCTCCTCGTTGCATAAAATGTCCAGCTCGTTAAAG +
Preference number: 2 (lower is better)
Translates to: LNLHLVTTTNLSVWS*PRISSLHKMSSSLK
Trigger: CTTTAACGAGCTGGACATTTTATGCAACGAGGAGATCCTGGGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CCA 90 bp CCAGGCAGCTCCTGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTTGGGTCATCAGAACATaGGCTAAAACAGATAATTTT +
Preference number: 2 (lower is better)
Translates to: PGSSCRLSSKHRCVRRASWVIRT*AKTDNF
Trigger: AAAATTATCTGTTTTAGCCCATGTTCTGATGACCCA...AGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCAGGAGCTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR CAA 90 bp TTGCATAAAATGTCCAGCTCGTTAAAGGATGAAAGGTTGAGTTTTTaGGCGATGAACTTCTTCAGATGCAAGACGGTCGCCTGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: LHKMSSSLKDERLSF*AMNFFRCKTVAWAE
Trigger: CTCAGCCCAGGCGACCGTCTTGCATCTGAAGAAGTTCATCGCCAAAAAACTCAACCTTTCATCCTTTAACGAGCTGGACATTTTATGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR TCA 90 bp AGGAAGGATTCAATAAAAGTCCAACTACACTTGAGGCTTATCATGAAACCTAAAGCTCGTGTCAGAAGGTaGCTCAGAACCGTGTTGCCT +
Preference number: 2 (lower is better)
Translates to: RKDSIKVQLHLRLIMKPKARVRR*LRTVLP
Trigger: AGGCAACACGGTTCTGAGTCACCTTCTGACACGAGC...TTTAGGTTTCATGATAAGCCTCAAGTGTAGTTGGACTTTTATTGAATCCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
3UTR-3UTR CAA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTTGAGTGTGTGGTCCTaGCCCAGGATCTCCTCGTTG +
Preference number: 3 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVLSVWS*PRISSL
Trigger: CAACGAGGAGATCCTGGGCAAGGACCACACACTCAA...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR GCA 72 bp ATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTaGGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCA +
Preference number: 3 (lower is better)
Translates to: MFLSAAAGSTQG*EGPVCGRCVAP
Trigger: TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
3UTR CCA 72 bp GGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTaGGCGCTGTGTGGCACCATTCACAGCAAGTCCATC +
Preference number: 3 (lower is better)
Translates to: GREHPRVRGPSL*ALCGTIHSKSI
Trigger: GATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR CCA 72 bp ATCCCGACGTGGCGTCTGGGGCCCCGTTTCCAGGGCTaGGTGTGTCAGCCACAGGTGAGCGACAGTTCTGAG +
Preference number: 3 (lower is better)
Translates to: IPTWRLGPRFQG*VCQPQVSDSSE
Trigger: CTCAGAACTGTCGCTCACCTGTGGCTGACACACCCAGCCCTGGAAACGGGGCCCCAGACGCCACGTCGGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR TCA 72 bp GCCTTGGACAGACGGGGCAGTGAGTGTGTCTGGGCATaGGCCCGAAGCCACCACCAGCAAATCCTCCCCACG +
Preference number: 3 (lower is better)
Translates to: ALDRRGSECVWA*ARSHHQQILPT
Trigger: CGTGGGGAGGATTTGCTGGTGGTGGCTTCGGGCTCATGCCCAGACACACTCACTGCCCCGTCTGTCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR TCA 72 bp GGCCCCGTTTCCAGGGCTGGGTGTGTCAGCCACAGGTaGGCGACAGTTCTGAGTGAGTCCAAGTGCCGACCT +
Preference number: 3 (lower is better)
Translates to: GPVSRAGCVSHR*ATVLSESKCRP
Trigger: AGGTCGGCACTTGGACTCACTCAGAACTGTCGCTCACCTGTGGCTGACACACCCAGCCCTGGAAACGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR TCA 72 bp GATGAACTTCTTCAGATGCAAGACGGTCGCCTGGGCTaGGCAGCGGATCCACTTCCGCTTCAGCCCGCGCAG +
Preference number: 3 (lower is better)
Translates to: DELLQMQDGRLG*AADPLPLQPAQ
Trigger: CTGCGCGGGCTGAAGCGGAAGTGGATCCGCTGCTCAGCCCAGGCGACCGTCTTGCATCTGAAGAAGTTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR GCA 72 bp AGCCCGAAGCCACCACCAGCAAATCCTCCCCACGGATaGCAGGAGAGCTCTGATCCTAACCACCACCACCTC +
Preference number: 3 (lower is better)
Translates to: SPKPPPANPPHG*QESSDPNHHHL
Trigger: GAGGTGGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTGGTGGCTTCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR CCA 72 bp CCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTaGCACCATTCACAGCAAGTCCATCTTGGGTCTGTA +
Preference number: 3 (lower is better)
Translates to: PKGARAQSVGAV*HHSQQVHLGSV
Trigger: TACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR TCA 72 bp ACCCCATCGGCGTGCTCCACTGAACACGGGCGTCTCTaGGCTCGTTTCTGTGCAGATGCTCACTGCTGTCCT +
Preference number: 3 (lower is better)
Translates to: TPSACSTEHGRL*ARFCADAHCCP
Trigger: AGGACAGCAGTGAGCATCTGCACAGAAACGAGCTCAGAGACGCCCGTGTTCAGTGGAGCACGCCGATGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR GCA 72 bp AGCGGATCCACTTCCGCTTCAGCCCGCGCAGTTTGCTaGTGTTACACTCCAGGCAGATGCTCACCTGCTCGT +
Preference number: 3 (lower is better)
Translates to: SGSTSASARAVC*CYTPGRCSPAR
Trigger: ACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAAGCGGAAGTGGATCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR CCA 72 bp CTCCAAGGTGGTTGGCTTCTTGGAAAGCCTGAATGGTaGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGG +
Preference number: 3 (lower is better)
Translates to: LQGGWLLGKPEW*PRTTWAPKEWR
Trigger: CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAGAAGCCAACCACCTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR CCA 72 bp GTCAGGTTAACGCGGTTACAAAAGCAGGGTCACCACTaGCTGAAGACATCGACACGGGCGCCACTCGCCCGT +
Preference number: 3 (lower is better)
Translates to: VRLTRLQKQGHH*LKTSTRAPLAR
Trigger: ACGGGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAACCGCGTTAACCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CCA 72 bp TTGGCGATGAACTTCTTCAGATGCAAGACGGTCGCCTaGGCTGAGCAGCGGATCCACTTCCGCTTCAGCCCG +
Preference number: 3 (lower is better)
Translates to: LAMNFFRCKTVA*AEQRIHFRFSP
Trigger: CGGGCTGAAGCGGAAGTGGATCCGCTGCTCAGCCCAGGCGACCGTCTTGCATCTGAAGAAGTTCATCGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CAA 90 bp GGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCCGGCTAATCTAAGTGCTGTTTaGCAGAGCAGGTCTCCCCCT +
Preference number: 3 (lower is better)
Translates to: GRCSPARRCGGSRCPPPANLSAV*QSRSPP
Trigger: AGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATT...AGCCGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR TCA 72 bp CGGTGCAACCAACTGAGGCTGAAACACAGATTCAGCTaGAATGCAGCTTCTGCAGAGCGGGGGCCGGCTTCC +
Preference number: 3 (lower is better)
Translates to: RCNQLRLKHRFS*NAASAERGPAS
Trigger: GGAAGCCGGCCCCCGCTCTGCAGAAGCTGCATTTCAGCTGAATCTGTGTTTCAGCCTCAGTTGGTTGCACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR CCA 72 bp CTTCTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTaGGCTCCCAAGGAGTGGAGGGAGGAGGGATTCAGT +
Preference number: 3 (lower is better)
Translates to: LLGKPEWWPRTT*APKEWREEGFS
Trigger: ACTGAATCCCTCCTCCCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CAA 90 bp CGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGCAGGATTCAGCCCGCGCAGTTaGCTGCTGTTACACTCCAGG +
Preference number: 3 (lower is better)
Translates to: RCVAPFTASPSWVCSAAGFSPRS*LLLHSR
Trigger: CCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAA...TCCTGCTGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR GCA 72 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTaGCTGGAGCATCACTCTCCCTGCAAGGCTGAAGCA +
Preference number: 3 (lower is better)
Translates to: RELVSEGDSEPC*LEHHSPCKAEA
Trigger: TGCTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
3UTR CCA 72 bp AATCTCCAAGGTGGTTGGCTTCTTGGAAAGCCTGAATaGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGG +
Preference number: 3 (lower is better)
Translates to: NLQGGWLLGKPE*WPRTTWAPKEW
Trigger: CCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAGAAGCCAACCACCTTGGAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR CCA 72 bp GCATGCATGTGTGTGTGTGCGGCCAGGCTGCCTGAGTaGTCCATCCAATACCCACAGCATTGCTCATCCCAT +
Preference number: 3 (lower is better)
Translates to: ACMCVCAARLPE*SIQYPQHCSSH
Trigger: ATGGGATGAGCAATGCTGTGGGTATTGGATGGACCACTCAGGCAGCCTGGCCGCACACACACACATGCATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR-3UTR CAA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGAAACCGTCCTGGGAGTaGATGGGCTTAAAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRKPSWE*MGLKKE
Trigger: CTCTTTCTTTAAGCCCATCAACTCCCAGGACGGTTT...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CAA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCATTGAGTGTGTGGTCCTaGCCCAGGATCTCCTCGTTG +
Preference number: 3 (lower is better)
Translates to: CGRCVAPFTASPSWVCSALSVWS*PRISSL
Trigger: CAACGAGGAGATCCTGGGCAAGGACCACACACTCAA...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR TCA 72 bp TGGGTGTGTCAGCCACAGGTGAGCGACAGTTCTGAGTaGGTCCAAGTGCCGACCTCACACAATGAAAGGCGA +
Preference number: 3 (lower is better)
Translates to: WVCQPQVSDSSE*VQVPTSHNERR
Trigger: TCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAACTGTCGCTCACCTGTGGCTGACACACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR TCA 72 bp TGTAGCATGCATGTGTGTGTGTGCGGCCAGGCTGCCTaGGTGGTCCATCCAATACCCACAGCATTGCTCATC +
Preference number: 3 (lower is better)
Translates to: CSMHVCVCGQAA*VVHPIPTALLI
Trigger: GATGAGCAATGCTGTGGGTATTGGATGGACCACTCAGGCAGCCTGGCCGCACACACACACATGCATGCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CCA 72 bp GAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTaGAGGGAGGAGGGATTCAGTTCCACAGGAAATAAA +
Preference number: 3 (lower is better)
Translates to: EWWPRTTWAPKE*REEGFSSTGNK
Trigger: TTTATTTCCTGTGGAACTGAATCCCTCCTCCCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CAA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGCTGGTAGTGTCTTGTaGAGTGTGAATTCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRAGSVL*SVNSLS
Trigger: TGAGAGAGAATTCACACTCAACAAGACACTACCAGC...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
3UTR-3UTR CAA 90 bp AGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGGCGGCACTCAACAATTaGGGGGAACAAGTAATTTTT +
Preference number: 3 (lower is better)
Translates to: SLVHMTPRGNVLKRGGREAALNN*GEQVIF
Trigger: AAAAATTACTTGTTCCCCCAAATTGTTGAGTGCCGC...CTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR-3UTR CAA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCTGAAAGGAAACATCTaGCCGTTCTGGTCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSLKGNI*PFWSQE
Trigger: CTCCTGAGACCAGAACGGCAAGATGTTTCCTTTCAG...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CAA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGGTGCTGGTAGTGTCTaGTTGAGTGTGAATTCTCTC +
Preference number: 3 (lower is better)
Translates to: CGRCVAPFTASPSWVCSAGAGSV*LSVNSL
Trigger: GAGAGAATTCACACTCAACAAGACACTACCAGCACC...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CAA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCTCACTGCTGTCCTCCTaGTGGCTCTCAGCTTCTGAA +
Preference number: 3 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLSLLSS*WLSASE
Trigger: TTCAGAAGCTGAGAGCCACAAGGAGGACAGCAGTGA...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR-3UTR CAA 90 bp CGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGCAGGATCTCATTTCCGCTTCTaGGAGGCCTGGTACCAATTT +
Preference number: 3 (lower is better)
Translates to: RCVAPFTASPSWVCSAAGSHFRF*EAWYQF
Trigger: AAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAGA...TCCTGCTGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CAA 90 bp TCCTCCAGGTACTTCACCAGGCAGCTCCTGCAGACTGTCATCAAAGCACAGGTGGCTGGTAGTGTCTTGTaGAGTGTGAATTCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: SSRYFTRQLLQTVIKAQVAGSVL*SVNSLS
Trigger: TGAGAGAGAATTCACACTCAACAAGACACTACCAGC...CACCTGTGCTTTGATGACAGTCTGCAGGAGCTGCCTGGTGAAGTACCTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR-3UTR CAA 90 bp CTGGCTGAAGACATCGACACGGGCGCCACTCGCCCGTCTGTGTATTTAAATCTAGGTGCTGGTAGTGTCTaGTTGAGTGTGAATTCTCTC +
Preference number: 3 (lower is better)
Translates to: LAEDIDTGATRPSVYLNLGAGSV*LSVNSL
Trigger: GAGAGAATTCACACTCAACAAGACACTACCAGCACC...TAGATTTAAATACACAGACGGGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR-3UTR CAA 90 bp TTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCAAAGTCCAACTACACTaGAGGCTTATCATGAAACCT +
Preference number: 3 (lower is better)
Translates to: LQKQGHHWLKTSTRAPLAKVQLH*RLIMKP
Trigger: AGGTTTCATGATAAGCCTCAAGTGTAGTTGGACTTT...GGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR GCA 72 bp AGGCTGCCTGAGTGGTCCATCCAATACCCACAGCATTaGTCATCCCATGAGCAAGTCATCTCTCATGCTCAT +
Preference number: 3 (lower is better)
Translates to: RLPEWSIQYPQH*SSHEQVISHAH
Trigger: ATGAGCATGAGAGATGACTTGCTCATGGGATGAGCAATGCTGTGGGTATTGGATGGACCACTCAGGCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR-3UTR CAA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGCTGGTAGTGTCTTGTaGAGTGTGAATTCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRAGSVL*SVNSLS
Trigger: TGAGAGAGAATTCACACTCAACAAGACACTACCAGC...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
3UTR TCA 72 bp GAGTCCTCTAACACCAAAGCACAGACTCATCAGGTGTaGGGACGCACATCAGGTGTGAAGAACACACTGGAA +
Preference number: 3 (lower is better)
Translates to: ESSNTKAQTHQV*GRTSGVKNTLE
Trigger: TTCCAGTGTGTTCTTCACACCTGATGTGCGTCCTCACACCTGATGAGTCTGTGCTTTGGTGTTAGAGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR CCA 72 bp AATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTaGTCCTTGCCCAGGATCTCCTCGTTGCATAAAATG +
Preference number: 3 (lower is better)
Translates to: NLHLVTTTNLSV*SLPRISSLHKM
Trigger: CATTTTATGCAACGAGGAGATCCTGGGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR TCA 72 bp GTTATAAATATTCTCTATTCAGAAGTCTGGTCCACATaGCACCCAGAGGCAATGTTCTTAAGCGCGGCGGCC +
Preference number: 3 (lower is better)
Translates to: VINILYSEVWST*HPEAMFLSAAA
Trigger: GGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCTGAATAGAGAATATTTATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
3UTR TCA 72 bp ATTTTTAAAAGTAAGAGTTGTTCCGTAAACCAGCACTaGGCTGGTCACACGGCCTCTGGTCTACCTGCTGAG +
Preference number: 3 (lower is better)
Translates to: IFKSKSCSVNQH*AGHTASGLPAE
Trigger: CTCAGCAGGTAGACCAGAGGCCGTGTGACCAGCTCAGTGCTGGTTTACGGAACAACTCTTACTTTTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
3UTR TCA 72 bp AAAGGAAACATCTTGCCGTTCTGGTCTCAGGAGCAATaGGAAGGTTTTAATTGCCCCGTCAATGGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: KGNILPFWSQEQ*EGFNCPVNGLP
Trigger: AGGAAGCCCATTGACGGGGCAATTAAAACCTTCTCATTGCTCCTGAGACCAGAACGGCAAGATGTTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGCACAGAAACGGCACCTaGGCACGACGCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVHRNGT*ARRLGS
Trigger: GGACCCCAGGCGTCGTGCTCAGGTGCCGTTTCTGTG...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470161.6
CDS-3UTR GCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGACTCCCACGCGACGCTaGCTCCTGGCTCCGCACGCG +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWATPTRR*LLAPHA
Trigger: CGCGTGCGGAGCCAGGAGGCAGCGTCGCGTGGGAGT...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGGACGGTCGCCTGGGCTaGGCAGCGGATCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWADGRLG*AADPLP
Trigger: CGGAAGTGGATCCGCTGCTCAGCCCAGGCGACCGTC...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp CGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTCTGCGGTCTCGGGGCTaGGGGCGAGCAAGGCGCACG +
Preference number: 4 (lower is better)
Translates to: RTQRSSTPAGPPAMGPQVLRSRG*GRARRT
Trigger: CGTGCGCCTTGCTCGCCCGCAGCCCCGAGACCGCAG...AACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400151.6
ENST00000430644.5
CDS-3UTR CCA 90 bp TTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTCCCGACGTGGCGTCTaGGGCCCCGTTTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSAAAGSTQGCEGPVCGRSRRGV*GPVSRA
Trigger: AGCCCTGGAAACGGGGCCCCAGACGCCACGTCGGGA...GCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp CGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTCTCTCCCTGCAAGGCTaGAGCACGGGGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RTQRSSTPAGPPAMGPQVLSLQG*STGWGG
Trigger: CCCGCCCCACCCCGTGCTTCAGCCTTGCAGGGAGAG...AACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GAGCGTCTAGAGCCAGGGCGCCCACCCCATCGGCGTGCTCCACTGAACACGGGCCTCTCCCTGCAAGGCTaGAGCACGGGGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: ERLEPGRPPHRRAPLNTGLSLQG*STGWGG
Trigger: CCCGCCCCACCCCGTGCTTCAGCCTTGCAGGGAGAG...GCCCGTGTTCAGTGGAGCACGCCGATGGGGTGGGCGCCCTGGCTCTAGACGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGCTGAAATGCAGCTTCTaGAGAGCGGGGGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVLKCSF*RAGAGF
Trigger: GAAGCCGGCCCCCGCTCTGCAGAAGCTGCATTTCAG...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGGTTCCTGCAGGGCCTTaGCCACGTGGCCATTGCCCG +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWAVPAGP*PRGHCP
Trigger: CGGGCAATGGCCACGTGGCCAAGGCCCTGCAGGAAC...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGCCTGAGCACGACGCCTaGGGTCCCTGCTACATTGTG +
Preference number: 4 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVPEHDA*GPCYIV
Trigger: CACAATGTAGCAGGGACCCCAGGCGTCGTGCTCAGG...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470161.6
CDS-3UTR GCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGACAAAGAGGCGGAAATaGCCGAGCCGAGCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWATKRRK*PSRAER
Trigger: GCGCTCGGCTCGGCTCGGGCATTTCCGCCTCTTTGT...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000470161.6
CDS-3UTR CCA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGCAGGGGGTGGCTCTaGTGGATCACAATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVCRGWL*WITILQ
Trigger: CTGCAGGATTGTGATCCACCAGAGCCACCCCCTGCA...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp CAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCGTCCCTGCTACATTGTaGCGCCTGCGGTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: QETHTAVVHTSRAASHGAVPATL*RLRSRG
Trigger: GCCCCGAGACCGCAGGCGTCACAATGTAGCAGGGAC...GGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp CACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGCTCTCCCTGCAAGGCTaGAGCACGGGGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: HPEAMFLSAAAGSTQGCELSLQG*STGWGG
Trigger: CCCGCCCCACCCCGTGCTTCAGCCTTGCAGGGAGAG...CTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp GAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCACTACATTGTGACGCCTaGGGTCTCGGGGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: ETHTAVVHTSRAASHGASLHCDA*GLGAAG
Trigger: GCCCGCAGCCCCGAGACCGCAGGCGTCACAATGTAG...TGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp ACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTCTACATTGTGACGCCTaGGGTCTCGGGGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: THTAVVHTSRAASHGASGLHCDA*GLGAAG
Trigger: GCCCGCAGCCCCGAGACCGCAGGCGTCACAATGTAG...ACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp GACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGGACGCCTGGGGTCCCTaGTACATTGTGACGCCTGCG +
Preference number: 4 (lower is better)
Translates to: DAHSGRPHQQGRQPWGLRDAWGP*YIVTPA
Trigger: CGCAGGCGTCACAATGTAGCAGGGACCCCAGGCGTC...CCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp ACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGACGCGACGCTGCCTCCTaGCTCCGCACGCGGACTCGC +
Preference number: 4 (lower is better)
Translates to: TPRGNVLKRGGREHPRVRRDAAS*LRTRTR
Trigger: GCGAGTCCGCGTGCGGAGCCAGGAGGCAGCGTCGCG...TCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGCCGTGGGCTGGTGTGTaGACATATGTGCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVPWAGV*TYVQAC
Trigger: ACATGCCTGCACATATGTCCACACACCAGCCCACGG...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp GCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCACCTCAGCCTGATGGATaGCACCTGCCCGTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: AGSTQGCEGPVCGRCVAPPQPDG*HLPVSG
Trigger: ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGG...TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp ACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTGGACAGACGGGGCAGTaGGTGTGTCTGGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: THTAVVHTSRAASHGASGGQTGQ*VCLGMS
Trigger: GCTCATGCCCAGACACACTCACTGCCCCGTCTGTCC...ACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR GCA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTACATTGTGACGCCTaGGGTCTCGGGGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSLHCDA*GLGAAG
Trigger: GCCCGCAGCCCCGAGACCGCAGGCGTCACAATGTAG...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp TCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCACGCGGACTCGCTTCTaGACCCTCCTTCCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SRDAHSGRPHQQGRQPWGTRTRF*TLLPAL
Trigger: CAGGGCCGGAAGGAGGGTGCAGAAGCGAGTCCGCGT...GCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AGCTTCTGCAGAGCGGGGGCCGGCTTCCCTCCTAGCCCTTCAGCTGCTCACCCTGGGGGTGCAGGCAGCTaGAGTGCTTGGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SFCRAGAGFPPSPSAAHPGGAGS*SAWARA
Trigger: TGCCCTGGCCCAAGCACTGCAGCTGCCTGCACCCCC...AGGGTGAGCAGCTGAAGGGCTAGGAGGGAAGCCGGCCCCCGCTCTGCAGAAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp ACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTCGAGGGCCCAGTCTGTaGGCGCTGTGTGGCACCATT +
Preference number: 4 (lower is better)
Translates to: THTAVVHTSRAASHGASGRGPSL*ALCGTI
Trigger: AATGGTGCCACACAGCGCCCACAGACTGGGCCCTCG...ACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGAGACATTGGTTAACCTaGGAGTGGGGAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWARHWLT*EWGGLG
Trigger: CCCCAGCCCTCCCCACTCCCAGGTTAACCAATGTCT...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp GACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTGTCACAGCGGCTACTaGCCTTGCTGCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: DAHSGRPHQQGRQPWGLRCHSGY*PCCSVG
Trigger: TCCCACGGAGCAGCAAGGCCAGTAGCCGCTGTGACA...CCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCAGACTCATCAGGTGTaGGGACGCACATCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWAQTHQV*GRTSGV
Trigger: CACACCTGATGTGCGTCCTCACACCTGATGAGTCTG...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp CACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGAGCCGAGCCTCAGCCTaGTGGATGGCACCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: HPEAMFLSAAAGSTQGCESRASA*WMAPAR
Trigger: ACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCT...CTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTATCGGCGTGCTCCACTaGACACGGGCGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSIGVLH*TRASLS
Trigger: GCTCAGAGACGCCCGTGTTCAGTGGAGCACGCCGAT...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTTAGAACTCCCACGCGACGCTaGCTCCTGGCTCCGCACGCG +
Preference number: 4 (lower is better)
Translates to: PSLSLMDGTCPSAVATLRTPTRR*LLAPHA
Trigger: CGCGTGCGGAGCCAGGAGGCAGCGTCGCGTGGGAGT...TCTAAGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGGGTGGATCACAATCCTaGAGGTGGGGCAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWAGGSQS*RWGRCC
Trigger: ACAACACCTGCCCCACCTGCAGGATTGTGATCCACC...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp CGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTGGCTACTGGCCTTGCTaGTCCGTGGGAGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: RTQRSSTPAGPPAMGPQVGYWPC*SVGGMW
Trigger: CCACATTCCTCCCACGGAGCAGCAAGGCCAGTAGCC...AACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp ACTCCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCGCGACGCTGCCTCCTaGCTCCGCACGCGGACTCGC +
Preference number: 4 (lower is better)
Translates to: TPGRCSPARRCGGSRCPPRDAAS*LRTRTR
Trigger: GCGAGTCCGCGTGCGGAGCCAGGAGGCAGCGTCGCG...AGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGGAGT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGCGCGACGCTGCCTCCTaGCTCCGCACGCGGACTCGC +
Preference number: 4 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRRDAAS*LRTRTR
Trigger: GCGAGTCCGCGTGCGGAGCCAGGAGGCAGCGTCGCG...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCCCCGTTTCCAGGGCTaGGTGTGTCAGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSPRFQG*VCQPQV
Trigger: CACCTGTGGCTGACACACCCAGCCCTGGAAACGGGG...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp ACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTCTCTGCCCCTGGTCCTaGTTCCTGCTTTTGTCGGGC +
Preference number: 4 (lower is better)
Translates to: THTAVVHTSRAASHGASGLCPWS*FLLLSG
Trigger: GCCCGACAAAAGCAGGAACCAGGACCAGGGGCAGAG...ACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp AGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTGTCCCTGCTACATTGTaGCGCCTGCGGTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: RAEPQPDGWHLPVSGSHTVPATL*RLRSRG
Trigger: GCCCCGAGACCGCAGGCGTCACAATGTAGCAGGGAC...AGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTGCATGGTTCTGTCATaGCCGATGTACTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: DAHSGRPHQQGRQPWGLRCMVLS*PMYCRG
Trigger: CCCCCTGCAGTACATCGGTCATGACAGAACCATGCA...CCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATGTGTCAGCCACAGGTaGGCGACAGTTCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: AGSTQGCEGPVCGRCVAPCVSHR*ATVLSE
Trigger: CTCACTCAGAACTGTCGCTCACCTGTGGCTGACACA...TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCGGTGGAGAAGACAATaGCAACTGCAGGACAACACC +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWARWRRQ*QLQDNT
Trigger: GGTGTTGTCCTGCAGTTGTCATTGTCTTCTCCACCG...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp ACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTAGGCCTCATCTGCTCTaGCACCACCCACAGGACCTT +
Preference number: 4 (lower is better)
Translates to: THTAVVHTSRAASHGASGRPHLL*HHPQDL
Trigger: AAGGTCCTGTGGGTGGTGTCAGAGCAGATGAGGCCT...ACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGGAACACGGGCGTCTCTaGGCTCGTTTCTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: DAHSGRPHQQGRQPWGLREHGRL*ARFCAD
Trigger: ATCTGCACAGAAACGAGCTCAGAGACGCCCGTGTTC...CCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp ACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGCGTGTCCGTCCCTCTaGCGGGGCATGGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TPRGNVLKRGGREHPRVRACPSL*RGMEAS
Trigger: TGAAGCCTCCATGCCCCGGCAGAGGGACGGACACGC...TCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp CGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTTCAGCCCGCGCAGTTTaGTGCTGTTACACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RTQRSSTPAGPPAMGPQVSARAV*CCYTPG
Trigger: GCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGA...AACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp TCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCGGCTACTGGCCTTGCTaGTCCGTGGGAGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: SRDAHSGRPHQQGRQPWGGYWPC*SVGGMW
Trigger: CCACATTCCTCCCACGGAGCAGCAAGGCCAGTAGCC...GCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGTGTGCAGATGCTCACTaGTGTCCTCCTTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWACADAH*CPPCGS
Trigger: AGAGCCACAAGGAGGACAGCAGTGAGCATCTGCACA...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGCGCGACGCTGCCTCCTaGCTCCGCACGCGGACTCGC +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRRDAAS*LRTRTR
Trigger: GCGAGTCCGCGTGCGGAGCCAGGAGGCAGCGTCGCG...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp GAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGAAAGCCTGAATGGTaGCCAAGGACCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ETHTAVVHTSRAASHGASGKPEW*PRTTWA
Trigger: AGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCC...TGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CCA 90 bp GCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCACTTGGAAAGCCTGAATaGTGGCCAAGGACCACCTGG +
Preference number: 4 (lower is better)
Translates to: AGSTQGCEGPVCGRCVAPLGKPE*WPRTTW
Trigger: CCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG...TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp GCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCAAAGCAGGGTCACCACTaGCTGAAGACATCGACACGG +
Preference number: 4 (lower is better)
Translates to: AGSTQGCEGPVCGRCVAPKQGHH*LKTSTR
Trigger: CCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTT...TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CAA 72 bp GAAGGCCGCCCAGAGGCTCCACAGACGGCAGGGCCATaGCGCTCCAGCCTCCAACGACTAAGGCTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: EGRPEAPQTAGP*RSSLQRLRLQG
Trigger: ACCTTGCAGCCTTAGTCGTTGGAGGCTGGAGCGCAATGGCCCTGCCGTCTGTGGAGCCTCTGGGCGGCCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp GGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATAGCAGGTCTCCCCCTTaGTGTCTCCCGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GPPAMGPQVSIRAEPQPDSRSPP*CLPAPP
Trigger: TGGAGGTGCCGGGAGACATCAAGGGGGAGACCTGCT...ATCAGGCTGAGGCTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp CGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTGCTCGTGTCAGAAGGTaGCTCAGAACCGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RTQRSSTPAGPPAMGPQVARVRR*LRTVLP
Trigger: AGGCAACACGGTTCTGAGTCACCTTCTGACACGAGC...AACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp ACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAAGGGTCACCACTGGCTaGAGACATCGACACGGGCGC +
Preference number: 4 (lower is better)
Translates to: TPRGNVLKRGGREHPRVRRVTTG*RHRHGR
Trigger: GCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCT...TCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGCGAGGCATCACTGGCTaGCGGGCACTCACACACAAC +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLRGITG*RALTHN
Trigger: GTTGTGTGTGAGTGCCCGTCAGCCAGTGATGCCTCG...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGGACGCACATCAGGTGTaGAGAACACACTGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWADAHQV*RTHWKV
Trigger: AACCTTCCAGTGTGTTCTTCACACCTGATGTGCGTC...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCCTGCGGTCTCGGGGCTaGGGGCGAGCAAGGCGCACG +
Preference number: 4 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCLRSRG*GRARRT
Trigger: CGTGCGCCTTGCTCGCCCGCAGCCCCGAGACCGCAG...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR GCA 90 bp GAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGCACGGGGTGGGCTACATTGTGACGCCTaGGGTCTCGGGGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: EPCCLEHHSPCKAEARGGLHCDA*GLGAAG
Trigger: GCCCGCAGCCCCGAGACCGCAGGCGTCACAATGTAG...CCCACCCCGTGCTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTGACGCCTGGGGTCCCTaGTACATTGTGACGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RAEPQPDGWHLPVSGSHTDAWGP*YIVTPA
Trigger: CGCAGGCGTCACAATGTAGCAGGGACCCCAGGCGTC...AGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCACTCCCACGCGACGCTaGCTCCTGGCTCCGCACGCG +
Preference number: 4 (lower is better)
Translates to: HQQILPTDARRALILTTTTPTRR*LLAPHA
Trigger: CGCGTGCGGAGCCAGGAGGCAGCGTCGCGTGGGAGT...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTTCACCTGCTCGTCGCTaGGGTGGTAGTCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSSPARR*GGSRCP
Trigger: AGGACAACGACTACCACCGCAGCGACGAGCAGGTGA...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp TTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCATGAACTTCTTCAGATaGAAGACGGTCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSAAAGSTQGCEGPVCGRMNFFR*KTVAWA
Trigger: AGCCCAGGCGACCGTCTTGCATCTGAAGAAGTTCAT...GCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGCTGAAATGCAGCTTCTaGAGAGCGGGGGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLLKCSF*RAGAGF
Trigger: GAAGCCGGCCCCCGCTCTGCAGAAGCTGCATTTCAG...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp GAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCACTTCAAGATCGTCTCTaGCCCTGGTCCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ETHTAVVHTSRAASHGASLQDRL*PWSWFL
Trigger: CAGGAACCAGGACCAGGGGCAGAGACGATCTTGAAG...TGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGCTGATGGATGGCACCTaGCCGTCAGCGGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLLMDGT*PSAVAT
Trigger: TGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAG...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp GACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGACGAACTTGAGTGTGTaGTCCTTGCCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: DAHSGRPHQQGRQPWGLRTNLSV*SLPRIS
Trigger: GGAGATCCTGGGCAAGGACCACACACTCAAGTTCGT...CCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp ACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGACGAGGGCCCAGTCTGTaGGCGCTGTGTGGCACCATT +
Preference number: 4 (lower is better)
Translates to: TPRGNVLKRGGREHPRVRRGPSL*ALCGTI
Trigger: AATGGTGCCACACAGCGCCCACAGACTGGGCCCTCG...TCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTTGCATGGTTCTGTCATaGCCGATGTACTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSCMVLS*PMYCRG
Trigger: CCCCCTGCAGTACATCGGTCATGACAGAACCATGCA...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGACGGTCGCCTGGGCTaGGCAGCGGATCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRDGRLG*AADPLP
Trigger: CGGAAGTGGATCCGCTGCTCAGCCCAGGCGACCGTC...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGGCCGACCTCACACAATaGAAGGCGAACCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLADLTQ*KANQSG
Trigger: CCCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGC...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp GCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCGCTTCTTGGAAAGCCTaGATGGTGGCCAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: APQPSRDAHSGRPHQQGRASWKA*MVAKDH
Trigger: GTGGTCCTTGGCCACCATTCAGGCTTTCCAAGAAGC...GCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR TCA 90 bp GCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATGCAGGCATGTGGTCTaGGCGTACACATATGTAGCA +
Preference number: 4 (lower is better)
Translates to: AGSTQGCEGPVCGRCVAPCRHVV*AYTYVA
Trigger: TGCTACATATGTGTACGCTCAGACCACATGCCTGCA...TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp GCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGACTCATCAGGTGTaGGGACGCACATCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: APQPSRDAHSGRPHQQGRQTHQV*GRTSGV
Trigger: CACACCTGATGTGCGTCCTCACACCTGATGAGTCTG...GCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp AGCCCGCGCAGTTTGCTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTCCCTGCGGGGCTGTaGGGTTCGGGAGACCTGATG +
Preference number: 4 (lower is better)
Translates to: SPRSLLLLHSRQMLTCSSLPAGL*GSGDLM
Trigger: CATCAGGTCTCCCGAACCTCACAGCCCCGCAGGGAG...CGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR GCA 90 bp GCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACGCGTGTCCGTCCCTCTaGCGGGGCATGGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AMGPQVSIRAEPQPDGWHACPSL*RGMEAS
Trigger: TGAAGCCTCCATGCCCCGGCAGAGGGACGGACACGC...GTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTGAGGCCCCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp TGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTGCGTGTCCGTCCCTCTaGCGGGGCATGGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CEGPVCGRCVAPFTASPSACPSL*RGMEAS
Trigger: TGAAGCCTCCATGCCCCGGCAGAGGGACGGACACGC...AGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp TTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCCGATGGGAATCTAAGTaGTGTTTTGCAGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSAAAGSTQGCEGPVCGRRWESK*CFAEQV
Trigger: GACCTGCTCTGCAAAACAGCACTTAGATTCCCATCG...GCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTACACTCCAGGCAGATaGTCACCTGCTCGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLYTPGR*SPARRC
Trigger: GCAGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTA...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTTGCTCACCCTGTCCCTaGAGCTCTGAAAAACGCCCT +
Preference number: 4 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSCSPCP*SSEKRP
Trigger: AGGGCGTTTTTCAGAGCTGCAGGGACAGGGTGAGCA...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp TCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGAGCGGCTACTGGCCTTaGTGCTCCGTGGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: STPAGPPAMGPQVSIRAESGYWP*CSVGGM
Trigger: CATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCT...CTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp TCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCTGATGGATGGCACCTaGCCGTCAGCGGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: STPAGPPAMGPQVSIRAELMDGT*PSAVAT
Trigger: TGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAG...CTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTCTGAGCACGACGCCTaGGGTCCCTGCTACATTGTG +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLSEHDA*GPCYIV
Trigger: CACAATGTAGCAGGGACCCCAGGCGTCGTGCTCAGA...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGCAGGGGGTGGCTCTaGTGGATCACAATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLCRGWL*WITILQ
Trigger: CTGCAGGATTGTGATCCACCAGAGCCACCCCCTGCA...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp TCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCTCTGTGGGCGCTGTGTaGCACCATTCACAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SRDAHSGRPHQQGRQPWGSVGAV*HHSQQV
Trigger: GACTTGCTGTGAATGGTGCCACACAGCGCCCACAGA...GCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp GCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCAGAGGACGATCGGCTCTaGGAGACTGTGAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: AGSTQGCEGPVCGRCVAPEDDRL*ETVKCF
Trigger: AAAACACTTCACAGTCTCCCAGAGCCGATCGTCCTC...TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCAGATTTTCAAGACCTaGAAAGCAAGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LKRGGREHPRVRGPSLWAQIFKT*KASRGS
Trigger: GCTCCCTCTGCTTGCTTTCCAGGTCTTGAAAATCTG...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR CCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCTCCCGACGTGGCGTCTaGGGCCCCGTTTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HQQILPTDARRALILTTTSRRGV*GPVSRA
Trigger: AGCCCTGGAAACGGGGCCCCAGACGCCACGTCGGGA...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp ACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGACTCTGCCCCTGGTCCTaGTTCCTGCTTTTGTCGGGC +
Preference number: 4 (lower is better)
Translates to: TPRGNVLKRGGREHPRVRLCPWS*FLLLSG
Trigger: GCCCGACAAAAGCAGGAACCAGGACCAGGGGCAGAG...TCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTGGCCTTGCTGCTCCGTaGGAGGAATGTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RAEPQPDGWHLPVSGSHTGLAAP*EECGVS
Trigger: AGAGACCCCACATTCCTCCCACGGAGCAGCAAGGCC...AGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTTGTCACAGCGGCTACTaGCCTTGCTGCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: RAEPQPDGWHLPVSGSHTCHSGY*PCCSVG
Trigger: TCCCACGGAGCAGCAAGGCCAGTAGCCGCTGTGACA...AGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp AGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTGGTGAGCGACAGTTCTaGGTGAGTCCAAGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: RAEPQPDGWHLPVSGSHTGERQF*VSPSAD
Trigger: GTCGGCACTTGGACTCACTCAGAACTGTCGCTCACC...AGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR TCA 90 bp TGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTATCGGCGTGCTCCACTaGACACGGGCGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: CEGPVCGRCVAPFTASPSIGVLH*TRASLS
Trigger: GCTCAGAGACGCCCGTGTTCAGTGGAGCACGCCGAT...AGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCACAAAGAGGCGGAAATaGCCGAGCCGAGCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: QVSIRAEPQPDGWHLPVSTKRRK*PSRAER
Trigger: GCGCTCGGCTCGGCTCGGGCATTTCCGCCTCTTTGT...GCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400151.6
CDS-3UTR GCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGCTACATTGTGACGCCTaGGGTCTCGGGGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRLHCDA*GLGAAG
Trigger: GCCCGCAGCCCCGAGACCGCAGGCGTCACAATGTAG...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTTCAGCCCGCGCAGTTTaGTGCTGTTACACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RAEPQPDGWHLPVSGSHTSARAV*CCYTPG
Trigger: GCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGA...AGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp GAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAATGAACTTCTTCAGATaGAAGACGGTCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ETHTAVVHTSRAASHGASMNFFR*KTVAWA
Trigger: AGCCCAGGCGACCGTCTTGCATCTGAAGAAGTTCAT...TGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCTGATGGATGGCACCTaGCCGTCAGCGGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: NAPQPSRDAHSGRPHQQGLMDGT*PSAVAT
Trigger: TGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAG...GCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp ACTCCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTTGCAAGACGGTCGCCTaGGCTGAGCAGCGGATCCAC +
Preference number: 4 (lower is better)
Translates to: TPGRCSPARRCGGSRCPPCKTVA*AEQRIH
Trigger: GTGGATCCGCTGCTCAGCCCAGGCGACCGTCTTGCA...AGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGGAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGTCTGTGGGCGCTGTGTaGCACCATTCACAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: HPEAMFLSAAAGSTQGCESVGAV*HHSQQV
Trigger: GACTTGCTGTGAATGGTGCCACACAGCGCCCACAGA...CTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp CCCGCGCAGTTTGCTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTCCCCGTTTCCAGGGCTaGGTGTGTCAGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: PAQFAAVTLQADAHLLVAPRFQG*VCQPQV
Trigger: CACCTGTGGCTGACACACCCAGCCCTGGAAACGGGG...AGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGAAACCAGCACTGAGCTaGTCACACGGCCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLKPALS*SHGLWS
Trigger: AGACCAGAGGCCGTGTGACCAGCTCAGTGCTGGTTT...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp TCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCCGTCTGTGTATTTAGGTGGCCCCACAGCGTaGCCCGAGGCATCACTGGCT +
Preference number: 4 (lower is better)
Translates to: SPLAEDIDTGATRPSVYLGGPTA*PEASLA
Trigger: AGCCAGTGATGCCTCGGGCCACGCTGTGGGGCCACC...TAAATACACAGACGGGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp AGCTTCTGCAGAGCGGGGGCCGGCTTCCCTCCTAGCCCTTCAGCTGCTCACCCTAAGGGAGCCGTGGGCTaGTGTGTGGACATATGTGCA +
Preference number: 4 (lower is better)
Translates to: SFCRAGAGFPPSPSAAHPKGAVG*CVDICA
Trigger: TGCACATATGTCCACACACCAGCCCACGGCTCCCTT...AGGGTGAGCAGCTGAAGGGCTAGGAGGGAAGCCGGCCCCCGCTCTGCAGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp AATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCGGCCTTGCTGCTCCGTaGGAGGAATGTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NAPQPSRDAHSGRPHQQGGLAAP*EECGVS
Trigger: AGAGACCCCACATTCCTCCCACGGAGCAGCAAGGCC...GCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp TGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTCCTCAGCCTGATGGATaGCACCTGCCCGTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: CEGPVCGRCVAPFTASPSPQPDG*HLPVSG
Trigger: ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGG...AGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGCCGTGGTGGCGTCGATaGGGTACCCGCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: ESKQRELVSEGDSEPCCLPWWRR*GTRCTG
Trigger: GCCTGTGCAGCGGGTACCTCATCGACGCCACCACGG...CAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCAGCAGGTCTCCCCCTTaGTGTCTCCCGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: HQQILPTDARRALILTTTSRSPP*CLPAPP
Trigger: TGGAGGTGCCGGGAGACATCAAGGGGGAGACCTGCT...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGACGGTCGCCTGGGCTaGGCAGCGGATCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: CGRCVAPFTASPSWVCSADGRLG*AADPLP
Trigger: CGGAAGTGGATCCGCTGCTCAGCCCAGGCGACCGTC...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GTTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCTGCGGCCAGGCTGCCTaGGTGGTCCATCCAATACCC +
Preference number: 4 (lower is better)
Translates to: VTKAGSPLAEDIDTGATRCGQAA*VVHPIP
Trigger: GGGTATTGGATGGACCACTCAGGCAGCCTGGCCGCA...GCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp AATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCGGAAACTGCCAGCAGTaGGCACTGTCACAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: NAPQPSRDAHSGRPHQQGGNCQQ*ALSQRL
Trigger: TAGCCGCTGTGACAGTGCTCACTGCTGGCAGTTTCC...GCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATCAGACTCATCAGGTGTaGGGACGCACATCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GPPAMGPQVSIRAEPQPDQTHQV*GRTSGV
Trigger: CACACCTGATGTGCGTCCTCACACCTGATGAGTCTG...ATCAGGCTGAGGCTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp GAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGCACGGGGTGGGCTCCTGCAGAAGGTGTaGAGACACTCGGTCACCGTG +
Preference number: 4 (lower is better)
Translates to: EPCCLEHHSPCKAEARGGLLQKV*RHSVTV
Trigger: CACGGTGACCGAGTGTCTGCACACCTTCTGCAGGAG...CCCACCCCGTGCTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000470161.6
CDS-3UTR GCA 90 bp ACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTCCAGGATCTCCTCGTTaGATAAAATGTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: THTAVVHTSRAASHGASGPGSPR*IKCPAR
Trigger: ACGAGCTGGACATTTTATGCAACGAGGAGATCCTGG...ACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp ACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGACTCAGAACCGTGTTaGCTGGAGCATCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: TPRGNVLKRGGREHPRVRDSEPC*LEHHSP
Trigger: GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTC...TCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTGGGGGTGCAGGCAGCTaGAGTGCTTGGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCGGAGS*SAWARA
Trigger: TGCCCTGGCCCAAGCACTGCAGCTGCCTGCACCCCC...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR GCA 90 bp GAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGCACGGGGTGGGGGGGAACGCTCAAACTaGAGCTCGTTCCTCAGACGC +
Preference number: 4 (lower is better)
Translates to: EPCCLEHHSPCKAEARGGGERSN*SSFLRR
Trigger: GCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCC...CCCACCCCGTGCTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR GCA 90 bp GTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTGGGCACGTACAGGTGTaGAGACACTCGGTCACCGTG +
Preference number: 4 (lower is better)
Translates to: VSIRAEPQPDGWHLPVSGGHVQV*RHSVTV
Trigger: CACGGTGACCGAGTGTCTGCACACCTGTACGTGCCC...ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400151.6
CDS-3UTR GCA 90 bp CCCGCGCAGTTTGCTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTAGCGGCTACTGGCCTTaGTGCTCCGTGGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: PAQFAAVTLQADAHLLVASGYWP*CSVGGM
Trigger: CATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCT...AGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp GGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCCGGCTAACCAGTCAGGGAGCTaGTGGAAAGCAAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GRCSPARRCGGSRCPPPANQSGS*WKASRG
Trigger: CCCTCTGCTTGCTTTCCAGCAGCTCCCTGACTGGTT...AGCCGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CCA 90 bp TCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCGCGACGCTGCCTCCTaGCTCCGCACGCGGACTCGC +
Preference number: 4 (lower is better)
Translates to: SCLNKMLPSHQETHTAVVRDAAS*LRTRTR
Trigger: GCGAGTCCGCGTGCGGAGCCAGGAGGCAGCGTCGCG...GACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp GCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGAAACAATATCTTGCATaGTTCTGTCATGACCGATGT +
Preference number: 4 (lower is better)
Translates to: ARRPGAPKGARAQSVGAVKQYLA*FCHDRC
Trigger: ACATCGGTCATGACAGAACCATGCAAGATATTGTTT...CACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp CACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGACGAACTTGAGTGTGTaGTCCTTGCCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: HPEAMFLSAAAGSTQGCETNLSV*SLPRIS
Trigger: GGAGATCCTGGGCAAGGACCACACACTCAAGTTCGT...CTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp TCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGTCTGTGGGCGCTGTGTaGCACCATTCACAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: STPAGPPAMGPQVSIRAESVGAV*HHSQQV
Trigger: GACTTGCTGTGAATGGTGCCACACAGCGCCCACAGA...CTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp GAGCGTCTAGAGCCAGGGCGCCCACCCCATCGGCGTGCTCCACTGAACACGGGCCAGATTTTCAAGACCTaGAAAGCAAGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ERLEPGRPPHRRAPLNTGQIFKT*KASRGS
Trigger: GCTCCCTCTGCTTGCTTTCCAGGTCTTGAAAATCTG...GCCCGTGTTCAGTGGAGCACGCCGATGGGGTGGGCGCCCTGGCTCTAGACGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430644.5
CDS-3UTR CCA 90 bp TTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCGGCCCGAGGCATCACTaGCTGACGGGCACTCACACA +
Preference number: 4 (lower is better)
Translates to: LQKQGHHWLKTSTRAPLAGPRHH*LTGTHT
Trigger: TGTGTGAGTGCCCGTCAGCCAGTGATGCCTCGGGCC...GGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTGGTGGCCCCACAGCGTaGCCCGAGGCATCACTGGCT +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCGGPTA*PEASLA
Trigger: AGCCAGTGATGCCTCGGGCCACGCTGTGGGGCCACC...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTCAGGCAGGACTGAGGTaGCCCCACAGCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCQAGLR*PHSVAR
Trigger: TCGGGCCACGCTGTGGGGCCACCTCAGTCCTGCCTG...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTTGCCCAGGGGCAGCCTaGCCACAAGCACGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCCPGAA*PQARGV
Trigger: GACCCCACGTGCTTGTGGCCAGGCTGCCCCTGGGCA...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CCA 90 bp GCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCACTCCTCTGGAGATTTaGAAACTGCCAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: APQPSRDAHSGRPHQQGRTPLEI*KLPAVS
Trigger: GCTCACTGCTGGCAGTTTCCAAATCTCCAGAGGAGT...GCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
3UTR CAA 72 bp GAGCAGCGGATCCACTTCCGCTTCAGCCCGCGCAGTTaGCTGCTGTTACACTCCAGGCAGATGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: EQRIHFRFSPRS*LLLHSRQMLTC
Trigger: GCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAAGCGGAAGTGGATCCGCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGTCCCTGCTACATTGTaGCGCCTGCGGTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: CGRCVAPFTASPSWVCSAVPATL*RLRSRG
Trigger: GCCCCGAGACCGCAGGCGTCACAATGTAGCAGGGAC...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp CCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCCGCGCGGCCTCTTTGTTTaGACTGTCGTCTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PGRCSPARRCGGSRCPPPRGLFV*TVVCFG
Trigger: ACCAAAGCAGACGACAGTTCAAACAAAGAGGCCGCG...CGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCCTCTCCCTGCAAGGCTaGAGCACGGGGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLLSLQG*STGWGG
Trigger: CCCGCCCCACCCCGTGCTTCAGCCTTGCAGGGAGAG...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp GGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATAGCGACAGTTCTGAGTaGGTCCAAGTGCCGACCTCA +
Preference number: 4 (lower is better)
Translates to: GARAQSVGAVWHHSQQVHSDSSE*VQVPTS
Trigger: TGAGGTCGGCACTTGGACTCACTCAGAACTGTCGCT...ATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR TCA 90 bp CCCGCGCAGTTTGCTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTTCCGTAAACCAGCACTaGGCTGGTCACACGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PAQFAAVTLQADAHLLVASVNQH*AGHTAS
Trigger: AGAGGCCGTGTGACCAGCTCAGTGCTGGTTTACGGA...AGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR TCA 90 bp GTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGGCCTCATCTGCTCTaGCACCACCCACAGGACCTT +
Preference number: 4 (lower is better)
Translates to: VSIRAEPQPDGWHLPVSGRPHLL*HHPQDL
Trigger: AAGGTCCTGTGGGTGGTGTCAGAGCAGATGAGGCCT...ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp TCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGTCCAGCCGAGCCTCAGCCTaGTGGATGGCACCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SAVATLRKTLRSSPRCESSRASA*WMAPAR
Trigger: ACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCT...GGACTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AGCGGCGCCTTGAATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTGGTCCACGCGGACTCGCTTCTaGACCCTCCTTCCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SGALNLHLVTTTNLSVWSTRTRF*TLLPAL
Trigger: CAGGGCCGGAAGGAGGGTGCAGAAGCGAGTCCGCGT...GGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGGCGCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430644.5
CDS-3UTR GCA 90 bp GAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGACGCGGACTCGCTTCTaGACCCTCCTTCCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ESKQRELVSEGDSEPCCLTRTRF*TLLPAL
Trigger: CAGGGCCGGAAGGAGGGTGCAGAAGCGAGTCCGCGT...CAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp TTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACACTCCCACGCGACGCTaGCTCCTGGCTCCGCACGCG +
Preference number: 4 (lower is better)
Translates to: FKQNAPQPSRDAHSGRPHTPTRR*LLAPHA
Trigger: CGCGTGCGGAGCCAGGAGGCAGCGTCGCGTGGGAGT...GTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCACTCCCACGCGACGCTaGCTCCTGGCTCCGCACGCG +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLTPTRR*LLAPHA
Trigger: CGCGTGCGGAGCCAGGAGGCAGCGTCGCGTGGGAGT...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTGCGTGTCCGTCCCTCTaGCGGGGCATGGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITACPSL*RGMEAS
Trigger: TGAAGCCTCCATGCCCCGGCAGAGGGACGGACACGC...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp GCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCGATGGGAATCTAAGTaGTGTTTTGCAGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: APQPSRDAHSGRPHQQGRRWESK*CFAEQV
Trigger: GACCTGCTCTGCAAAACAGCACTTAGATTCCCATCG...GCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCTCACCTGCTCGTCGCTaGGGTGGTAGTCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QVSIRAEPQPDGWHLPVSSPARR*GGSRCP
Trigger: AGGACAACGACTACCACCGCAGCGACGAGCAGGTGA...GCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGGCCCGCGCAGTTTGCTaGTGTTACACTCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLVHMTPRGNVLKRGGREARAVC*CYTPGR
Trigger: TCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGC...CTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGAAGCGAGGCCTCATCTaGTCTGACACCACCCACAGG +
Preference number: 4 (lower is better)
Translates to: KCSPAIKRRTQRSSTPAGKRGLI*SDTTHR
Trigger: CCTGTGGGTGGTGTCAGAGCAGATGAGGCCTCGCTT...CCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CCCGCGCAGTTTGCTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTAAGCGAGGCCTCATCTaGTCTGACACCACCCACAGG +
Preference number: 4 (lower is better)
Translates to: PAQFAAVTLQADAHLLVAKRGLI*SDTTHR
Trigger: CCTGTGGGTGGTGTCAGAGCAGATGAGGCCTCGCTT...AGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGCAGGACCCACCCCATCGGCGTaGTCCACTGAACACGGGCGT +
Preference number: 4 (lower is better)
Translates to: RCVAPFTASPSWVCSAAGPTPSA*STEHGR
Trigger: ACGCCCGTGTTCAGTGGAGCACGCCGATGGGGTGGG...TCCTGCTGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCACCCCATCGGCGTaGTCCACTGAACACGGGCGT +
Preference number: 4 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSPTPSA*STEHGR
Trigger: ACGCCCGTGTTCAGTGGAGCACGCCGATGGGGTGGG...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGTCTGAGCACGACGCCTaGGGTCCCTGCTACATTGTG +
Preference number: 4 (lower is better)
Translates to: SLVHMTPRGNVLKRGGRESEHDA*GPCYIV
Trigger: CACAATGTAGCAGGGACCCCAGGCGTCGTGCTCAGA...CTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCTGCAGGGGGTGGCTCTaGTGGATCACAATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QVSIRAEPQPDGWHLPVSCRGWL*WITILQ
Trigger: CTGCAGGATTGTGATCCACCAGAGCCACCCCCTGCA...GCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCTGCAAGACGGTCGCCTaGGCTGAGCAGCGGATCCAC +
Preference number: 4 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCCKTVA*AEQRIH
Trigger: GTGGATCCGCTGCTCAGCCCAGGCGACCGTCTTGCA...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGACAGCAAGTCCATCTTaGGTCTGTAGTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLTASPS*VCSAAG
Trigger: TCCTGCTGCACTACAGACCCAAGATGGACTTGCTGT...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCAGATTTTCAAGACCTaGAAAGCAAGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSQIFKT*KASRGS
Trigger: GCTCCCTCTGCTTGCTTTCCAGGTCTTGAAAATCTG...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR CCA 90 bp GTTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCTCAGAAATCCCGACGTaGCGTCTGGGGCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: VTKAGSPLAEDIDTGATRSEIPT*RLGPRF
Trigger: GAAACGGGGCCCCAGACGCCACGTCGGGATTTCTGA...GCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp CCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTTAGAAAACCAGCACTGAGCTaGTCACACGGCCTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PSLSLMDGTCPSAVATLRKPALS*SHGLWS
Trigger: AGACCAGAGGCCGTGTGACCAGCTCAGTGCTGGTTT...TCTAAGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CCA 90 bp CAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCACCTCTTGGCCAAGGACCACCTaGGCTCCCAAGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QILPTDARRALILTTTTSWPRTT*APKEWR
Trigger: CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCA...AGAGGTGGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGCAGGCAGGACTGAGGTaGCCCCACAGCGTGGCCCGA +
Preference number: 4 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRQAGLR*PHSVAR
Trigger: TCGGGCCACGCTGTGGGGCCACCTCAGTCCTGCCTG...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTGTTCCTGCAGGGCCTTaGCCACGTGGCCATTGCCCG +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCVPAGP*PRGHCP
Trigger: CGGGCAATGGCCACGTGGCCAAGGCCCTGCAGGAAC...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CCA 90 bp GGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATGATCGTCTCTGCCCCTaGTCCTGGTTCCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GARAQSVGAVWHHSQQVHDRLCP*SWFLLL
Trigger: CAAAAGCAGGAACCAGGACCAGGGGCAGAGACGATC...ATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTCCCTGCTACATTGTaGCGCCTGCGGTCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRVPATL*RLRSRG
Trigger: GCCCCGAGACCGCAGGCGTCACAATGTAGCAGGGAC...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR TCA 90 bp AGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGTGCATGGTTCTGTCATaGCCGATGTACTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLVHMTPRGNVLKRGGRECMVLS*PMYCRG
Trigger: CCCCCTGCAGTACATCGGTCATGACAGAACCATGCA...CTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTAGCAGGTCTCCCCCTTaGTGTCTCCCGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSSRSPP*CLPAPP
Trigger: TGGAGGTGCCGGGAGACATCAAGGGGGAGACCTGCT...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp TCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCGACGGTCGCCTGGGCTaGGCAGCGGATCCACTTCCG +
Preference number: 4 (lower is better)
Translates to: SCLNKMLPSHQETHTAVVDGRLG*AADPLP
Trigger: CGGAAGTGGATCCGCTGCTCAGCCCAGGCGACCGTC...GACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp TTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCGCCGACCTCACACAATaGAAGGCGAACCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LQKQGHHWLKTSTRAPLAADLTQ*KANQSG
Trigger: CCCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGC...GGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGTGTGTCAGCCACAGGTaGGCGACAGTTCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRCVSHR*ATVLSE
Trigger: CTCACTCAGAACTGTCGCTCACCTGTGGCTGACACA...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp ACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCCTGACGCACATCAGGTGTaGAGAACACACTGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TPAGPPAMGPQVSIRAEPDAHQV*RTHWKV
Trigger: AACCTTCCAGTGTGTTCTTCACACCTGATGTGCGTC...AGGCTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp GAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGACAAAGAGGCGGAAATaGCCGAGCCGAGCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: ESKQRELVSEGDSEPCCLTKRRK*PSRAER
Trigger: GCGCTCGGCTCGGCTCGGGCATTTCCGCCTCTTTGT...CAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000470161.6
CDS-3UTR GCA 90 bp AAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGGACGCCTGGGGTCCCTaGTACATTGTGACGCCTGCG +
Preference number: 4 (lower is better)
Translates to: KVTQNRVAWSITLPARLKDAWGP*YIVTPA
Trigger: CGCAGGCGTCACAATGTAGCAGGGACCCCAGGCGTC...CTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTGACGCCTGGGGTCCCTaGTACATTGTGACGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSDAWGP*YIVTPA
Trigger: CGCAGGCGTCACAATGTAGCAGGGACCCCAGGCGTC...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGACGCGGACTCGCTTCTaGACCCTCCTTCCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRTRTRF*TLLPAL
Trigger: CAGGGCCGGAAGGAGGGTGCAGAAGCGAGTCCGCGT...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTACGCGGACTCGCTTCTaGACCCTCCTTCCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRTRTRF*TLLPAL
Trigger: CAGGGCCGGAAGGAGGGTGCAGAAGCGAGTCCGCGT...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR GCA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGGCGTGTCCGTCCCTCTaGCGGGGCATGGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRACPSL*RGMEAS
Trigger: TGAAGCCTCCATGCCCCGGCAGAGGGACGGACACGC...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCCTCCTGCAGAAGGTGTaGAGACACTCGGTCACCGTG +
Preference number: 4 (lower is better)
Translates to: HQQILPTDARRALILTTTLLQKV*RHSVTV
Trigger: CACGGTGACCGAGTGTCTGCACACCTTCTGCAGGAG...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR GCA 90 bp GCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACGGTGGATCACAATCCTaGAGGTGGGGCAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: AMGPQVSIRAEPQPDGWHGGSQS*RWGRCC
Trigger: ACAACACCTGCCCCACCTGCAGGATTGTGATCCACC...GTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTGAGGCCCCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CCCGCGCAGTTTGCTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTGGTGGATCACAATCCTaGAGGTGGGGCAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PAQFAAVTLQADAHLLVAGGSQS*RWGRCC
Trigger: ACAACACCTGCCCCACCTGCAGGATTGTGATCCACC...AGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGCTGAGTGAGTCCAAGTaGCGACCTCACACAATGAAA +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLLSESK*RPHTMK
Trigger: TTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAG...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGAATCCTCCCCACGGATaGCAGGAGAGCTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRNPPHG*QESSDP
Trigger: AGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATT...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTAGACGGCAGGGCCATTaGGCTCCAGCCTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCRRQGH*APASND
Trigger: GTCGTTGGAGGCTGGAGCGCAATGGCCCTGCCGTCT...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR GCA 90 bp CCTCAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCCTTCAAGATCGTCTCTaGCCCTGGTCCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PQVSIRAEPQPDGWHLPVLQDRL*PWSWFL
Trigger: CAGGAACCAGGACCAGGGGCAGAGACGATCTTGAAG...GACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CCGTCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGAGCGGCTACTGGCCTTaGTGCTCCGTGGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: PSAVATLRKTLRSSPRCESGYWP*CSVGGM
Trigger: CATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCT...CTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGTGCAGGGGGTGGCTCTaGTGGATCACAATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRCRGWL*WITILQ
Trigger: CTGCAGGATTGTGATCCACCAGAGCCACCCCCTGCA...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGCTCATTTCCGCTTCTTaGAGGCCTGGTACCAATTTG +
Preference number: 4 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLLISAS*RPGTNL
Trigger: CAAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAG...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp GAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGTGCAAGACGGTCGCCTaGGCTGAGCAGCGGATCCAC +
Preference number: 4 (lower is better)
Translates to: ESKQRELVSEGDSEPCCLCKTVA*AEQRIH
Trigger: GTGGATCCGCTGCTCAGCCCAGGCGACCGTCTTGCA...CAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCACGAGGGCCCAGTCTGTaGGCGCTGTGTGGCACCATT +
Preference number: 4 (lower is better)
Translates to: CGRCVAPFTASPSWVCSARGPSL*ALCGTI
Trigger: AATGGTGCCACACAGCGCCCACAGACTGGGCCCTCG...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp GAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGCGAGGGCCCAGTCTGTaGGCGCTGTGTGGCACCATT +
Preference number: 4 (lower is better)
Translates to: ESKQRELVSEGDSEPCCLRGPSL*ALCGTI
Trigger: AATGGTGCCACACAGCGCCCACAGACTGGGCCCTCG...CAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp ACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCCTGAGGACGATCGGCTCTaGGAGACTGTGAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: TPAGPPAMGPQVSIRAEPEDDRL*ETVKCF
Trigger: AAAACACTTCACAGTCTCCCAGAGCCGATCGTCCTC...AGGCTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTTGGCCAAGGACCACCTaGGCTCCCAAGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCWPRTT*APKEWR
Trigger: CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCA...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCGGAAAGCCTGAATGGTaGCCAAGGACCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HQQILPTDARRALILTTTGKPEW*PRTTWA
Trigger: AGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCC...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTGGCCCGAGGCATCACTaGCTGACGGGCACTCACACA +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCGPRHH*LTGTHT
Trigger: TGTGTGAGTGCCCGTCAGCCAGTGATGCCTCGGGCC...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTCTGGCCACAAGCACGTaGGGTCCAAGGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCLATST*GPRHQD
Trigger: GTCCTGGTGCCTTGGACCCCACGTGCTTGTGGCCAG...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CCA 90 bp CCTCAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCTCCGTGGGAGGAATGTaGGGTCTCTCCTGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: PQVSIRAEPQPDGWHLPVSVGGM*GLSCVS
Trigger: CGAAACACAGGAGAGACCCCACATTCCTCCCACGGA...GACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp ACTCCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTTCCGTGGGAGGAATGTaGGGTCTCTCCTGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: TPGRCSPARRCGGSRCPPSVGGM*GLSCVS
Trigger: CGAAACACAGGAGAGACCCCACATTCCTCCCACGGA...AGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp TCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGTCCCCTCAGCCTGATGGATaGCACCTGCCCGTCAGCGGT +
Preference number: 4 (lower is better)
Translates to: SAVATLRKTLRSSPRCESPQPDG*HLPVSG
Trigger: ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGG...GGACTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGCTCGTGTCAGAAGGTaGCTCAGAACCGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRARVRR*LRTVLP
Trigger: AGGCAACACGGTTCTGAGTCACCTTCTGACACGAGC...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGAGCGACAGTTCTGAGTaGGTCCAAGTGCCGACCTCA +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRSDSSE*VQVPTS
Trigger: TGAGGTCGGCACTTGGACTCACTCAGAACTGTCGCT...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCGGTGAGCGACAGTTCTaGGTGAGTCCAAGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCGERQF*VSPSAD
Trigger: GTCGGCACTTGGACTCACTCAGAACTGTCGCTCACC...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCTCCGTAAACCAGCACTaGGCTGGTCACACGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCSVNQH*AGHTAS
Trigger: AGAGGCCGTGTGACCAGCTCAGTGCTGGTTTACGGA...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGGAGTGTGTCTGGGCATaGGCCCGAAGCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRECVWA*ARSHHQ
Trigger: CTGGTGGTGGCTTCGGGCTCATGCCCAGACACACTC...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCGCTTCTTGGAAAGCCTaGATGGTGGCCAAGGACCAC +
Preference number: 4 (lower is better)
Translates to: HQQILPTDARRALILTTTASWKA*MVAKDH
Trigger: GTGGTCCTTGGCCACCATTCAGGCTTTCCAAGAAGC...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTCGAGGCATCACTGGCTaGCGGGCACTCACACACAAC +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCRGITG*RALTHN
Trigger: GTTGTGTGTGAGTGCCCGTCAGCCAGTGATGCCTCG...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR TCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCAGCCGAGCCTCAGCCTaGTGGATGGCACCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLSRASA*WMAPAR
Trigger: ACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCT...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR TCA 90 bp TCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGTGGTCTCAGGAGCAATaGGAAGGTTTTAATTGCCCC +
Preference number: 4 (lower is better)
Translates to: STPAGPPAMGPQVSIRAEWSQEQ*EGFNCP
Trigger: GGGGCAATTAAAACCTTCTCATTGCTCCTGAGACCA...CTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp GAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGAGACCTGATGCATACTaGGGACACGGGAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: ESKQRELVSEGDSEPCCLRPDAY*GHGSLR
Trigger: GCGGAGGCTCCCGTGTCCTCAGTATGCATCAGGTCT...CAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR GCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGACGCCTGGGGTCCCTaGTACATTGTGACGCCTGCG +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRDAWGP*YIVTPA
Trigger: CGCAGGCGTCACAATGTAGCAGGGACCCCAGGCGTC...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR GCA 90 bp TCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCCGTCTGTGTATTTATCACCTGCTCGTCGCTaGGGTGGTAGTCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SPLAEDIDTGATRPSVYLSPARR*GGSRCP
Trigger: AGGACAACGACTACCACCGCAGCGACGAGCAGGTGA...TAAATACACAGACGGGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR GCA 90 bp TCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCCGTCTGTGTATTTAGCCCGCGCAGTTTGCTaGTGTTACACTCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SPLAEDIDTGATRPSVYLARAVC*CYTPGR
Trigger: TCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGC...TAAATACACAGACGGGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR GCA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCTCAGCCCGCGCAGTTTaGTGCTGTTACACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCSARAV*CCYTPG
Trigger: GCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGA...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGACTCAGAACCGTGTTaGCTGGAGCATCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRDSEPC*LEHHSP
Trigger: GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTC...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGAATCCTCCCCACGGATaGCAGGAGAGCTCTGATCCT +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRNPPHG*QESSDP
Trigger: AGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATT...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp CCGTCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGAAGCGAGGCCTCATCTaGTCTGACACCACCCACAGG +
Preference number: 4 (lower is better)
Translates to: PSAVATLRKTLRSSPRCEKRGLI*SDTTHR
Trigger: CCTGTGGGTGGTGTCAGAGCAGATGAGGCCTCGCTT...CTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCACCTCTTCTGAGCACGACGCCTaGGGTCCCTGCTACATTGTG +
Preference number: 4 (lower is better)
Translates to: QILPTDARRALILTTTTSSEHDA*GPCYIV
Trigger: CACAATGTAGCAGGGACCCCAGGCGTCGTGCTCAGA...AGAGGTGGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp GGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTCCGGCTCTCATTTCCGCTTCTTaGAGGCCTGGTACCAATTTG +
Preference number: 4 (lower is better)
Translates to: GRCSPARRCGGSRCPPPALISAS*RPGTNL
Trigger: CAAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAG...AGCCGGAGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp GGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATACAGCAAGTCCATCTTaGGTCTGTAGTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GARAQSVGAVWHHSQQVHTASPS*VCSAAG
Trigger: TCCTGCTGCACTACAGACCCAAGATGGACTTGCTGT...ATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp GAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGCACGGGGTGGGGAGGACGATCGGCTCTaGGAGACTGTGAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: EPCCLEHHSPCKAEARGGEDDRL*ETVKCF
Trigger: AAAACACTTCACAGTCTCCCAGAGCCGATCGTCCTC...CCCACCCCGTGCTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGCTGGCCACAAGCACGTaGGGTCCAAGGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRLATST*GPRHQD
Trigger: GTCCTGGTGCCTTGGACCCCACGTGCTTGTGGCCAG...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGGCCTTGCTGCTCCGTaGGAGGAATGTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CGRCVAPFTASPSWVCSAGLAAP*EECGVS
Trigger: AGAGACCCCACATTCCTCCCACGGAGCAGCAAGGCC...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTTGTCACAGCGGCTACTaGCCTTGCTGCTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITCHSGY*PCCSVG
Trigger: TCCCACGGAGCAGCAAGGCCAGTAGCCGCTGTGACA...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCTGCATGGTTCTGTCATaGCCGATGTACTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCCMVLS*PMYCRG
Trigger: CCCCCTGCAGTACATCGGTCATGACAGAACCATGCA...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR TCA 90 bp TCACCATTCCGATGGGAATCTAAGTGCTGTTTTGCAGAGCAGGTCTCCCCCTTGGAGTGTGTCTGGGCATaGGCCCGAAGCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: SPFRWESKCCFAEQVSPLECVWA*ARSHHQ
Trigger: CTGGTGGTGGCTTCGGGCTCATGCCCAGACACACTC...CAAGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATTCCCATCGGAATGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR TCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCGGACAGACGGGGCAGTaGGTGTGTCTGGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLGQTGQ*VCLGMS
Trigger: GCTCATGCCCAGACACACTCACTGCCCCGTCTGTCC...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp GGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATAAACACAGATTCAGCTaGAATGCAGCTTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPPAMGPQVSIRAEPQPDKHRFS*NAASAE
Trigger: CTCTGCAGAAGCTGCATTTCAGCTGAATCTGTGTTT...ATCAGGCTGAGGCTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR TCA 90 bp AGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGAATGTGACAAAAACATaGCCATCCGGGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLVHMTPRGNVLKRGGRENVTKT*PSGRRG
Trigger: CCCTCTCCTCCCGGATGGTCATGTTTTTGTCACATT...CTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp CGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGCAGGAGGAAACTGCCAGCAGTaGGCACTGTCACAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: RCVAPFTASPSWVCSAAGGNCQQ*ALSQRL
Trigger: TAGCCGCTGTGACAGTGCTCACTGCTGGCAGTTTCC...TCCTGCTGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp AAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGGACGCACATCAGGTGTaGAGAACACACTGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: KCSPAIKRRTQRSSTPAGDAHQV*RTHWKV
Trigger: AACCTTCCAGTGTGTTCTTCACACCTGATGTGCGTC...CCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp CGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTCTTTGTCCTAAAAGATaGCAGTATCTTCTACGTACA +
Preference number: 4 (lower is better)
Translates to: RTQRSSTPAGPPAMGPQVLCPKR*QYLLRT
Trigger: TGTACGTAGAAGATACTGTCATCTTTTAGGACAAAG...AACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCGGTGGATCACAATCCTaGAGGTGGGGCAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCGGSQS*RWGRCC
Trigger: ACAACACCTGCCCCACCTGCAGGATTGTGATCCACC...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp CCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTTAGACGATGGGAATCTAAGTaGTGTTTTGCAGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSLSLMDGTCPSAVATLRRWESK*CFAEQV
Trigger: GACCTGCTCTGCAAAACAGCACTTAGATTCCCATCG...TCTAAGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCATCACCTGCTCGTCGCTaGGGTGGTAGTCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: CGRCVAPFTASPSWVCSASPARR*GGSRCP
Trigger: AGGACAACGACTACCACCGCAGCGACGAGCAGGTGA...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTTACACTCCAGGCAGATaGTCACCTGCTCGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITYTPGR*SPARRC
Trigger: GCAGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTA...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTGCCCGCGCAGTTTGCTaGTGTTACACTCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITARAVC*CYTPGR
Trigger: TCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGC...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTTCAGCCCGCGCAGTTTaGTGCTGTTACACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITSARAV*CCYTPG
Trigger: GCCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGA...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGCAGATTCAGCTGAAATaGAGCTTCTGCAGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRQIQLK*SFCRAG
Trigger: CCCCGCTCTGCAGAAGCTGCATTTCAGCTGAATCTG...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTGGGGAACGCTCAAACTaGAGCTCGTTCCTCAGACGC +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCGERSN*SSFLRR
Trigger: GCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCC...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR GCA 90 bp AAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGTGTGTGCGGCCAGGCTaGCTGAGTGGTCCATCCAAT +
Preference number: 4 (lower is better)
Translates to: KVTQNRVAWSITLPARLKCVRPG*LSGPSN
Trigger: ATTGGATGGACCACTCAGGCAGCCTGGCCGCACACA...CTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR GCA 90 bp CAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCACCTCTCTTCAAGATCGTCTCTaGCCCTGGTCCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QILPTDARRALILTTTTSLQDRL*PWSWFL
Trigger: CAGGAACCAGGACCAGGGGCAGAGACGATCTTGAAG...AGAGGTGGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR GCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCTCACCAGGCAGCTCCTaGAGACTGTCATCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: HQQILPTDARRALILTTTSPGSS*RLSSKH
Trigger: GTGCTTTGATGACAGTCTGCAGGAGCTGCCTGGTGA...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CCA 90 bp GTTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCCCTCCTTCCGGCCCTaGCTCTTTTTCCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: VTKAGSPLAEDIDTGATRPSFRP*LFFHFL
Trigger: CAGAAAATGGAAAAAGAGCCAGGGCCGGAAGGAGGG...GCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTAGGGGGTGGCTCTGGTaGATCACAATCCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSRGWLW*ITILQV
Trigger: CACCTGCAGGATTGTGATCCACCAGAGCCACCCCCT...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTAGGGGGTGGCTCTGGTaGATCACAATCCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITRGWLW*ITILQV
Trigger: CACCTGCAGGATTGTGATCCACCAGAGCCACCCCCT...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCATGTACTGCAGGGGGTaGCTCTGGTGGATCACAATC +
Preference number: 4 (lower is better)
Translates to: HQQILPTDARRALILTTTMYCRG*LWWITI
Trigger: GATTGTGATCCACCAGAGCCACCCCCTGCAGTACAT...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp GTTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCACGAACTTGAGTGTGTaGTCCTTGCCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: VTKAGSPLAEDIDTGATRTNLSV*SLPRIS
Trigger: GGAGATCCTGGGCAAGGACCACACACTCAAGTTCGT...GCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp AGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGACAGCAAGTCCATCTTaGGTCTGTAGTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLVHMTPRGNVLKRGGRETASPS*VCSAAG
Trigger: TCCTGCTGCACTACAGACCCAAGATGGACTTGCTGT...CTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp CGATGGGAATCTAAGTGCTGTTTTGCAGAGCAGGTCTCCCCCTTGATGTCTCCCTCAGAAATCCCGACGTaGCGTCTGGGGCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: RWESKCCFAEQVSPLMSPSEIPT*RLGPRF
Trigger: GAAACGGGGCCCCAGACGCCACGTCGGGATTTCTGA...GGGAGACATCAAGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATTCCCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTTGGGCTCCCAAGGAGTaGAGGGAGGAGGGATTCAGT +
Preference number: 4 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSWAPKE*REEGFS
Trigger: ACTGAATCCCTCCTCCCTCCACTCCTTGGGAGCCCA...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp GAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGTGGGCTCCCAAGGAGTaGAGGGAGGAGGGATTCAGT +
Preference number: 4 (lower is better)
Translates to: ESKQRELVSEGDSEPCCLWAPKE*REEGFS
Trigger: ACTGAATCCCTCCTCCCTCCACTCCTTGGGAGCCCA...CAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTCCTCAGACGCACTGTTaGGTGCGAAGGACACCTGGA +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCPQTHC*VRRTPG
Trigger: TCCAGGTGTCCTTCGCACCCAACAGTGCGTCTGAGG...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CCA 90 bp GAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGCCAGGCTGCCTGAGTaGTCCATCCAATACCCACAG +
Preference number: 4 (lower is better)
Translates to: ESKQRELVSEGDSEPCCLARLPE*SIQYPQ
Trigger: CTGTGGGTATTGGATGGACCACTCAGGCAGCCTGGC...CAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp TGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTAAGGTGACAGAGCTGTaGGTCATCAGAACATGGGCT +
Preference number: 4 (lower is better)
Translates to: CEGPVCGRCVAPFTASPSKVTEL*VIRTWA
Trigger: AGCCCATGTTCTGATGACCCACAGCTCTGTCACCTT...AGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp TGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCAGGGCGGCTCGTGTCAGAAGGTaGCTCAGAACCGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: CRLSSKHRCVRRASRARAARVRR*LRTVLP
Trigger: AGGCAACACGGTTCTGAGTCACCTTCTGACACGAGC...CGCCCTGGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCCGGTGGAGAAGACAATaGCAACTGCAGGACAACACC +
Preference number: 4 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCRWRRQ*QLQDNT
Trigger: GGTGTTGTCCTGCAGTTGTCATTGTCTTCTCCACCG...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGCATTGCTCATCCCATaGGCAAGTCATCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRALLIP*ASHLSC
Trigger: GCATGAGAGATGACTTGCTCATGGGATGAGCAATGC...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp CGCCTTGAATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTGGTCCTTGCCAGGCCTCATCTGCTCTaGCACCACCCACAGGACCTT +
Preference number: 4 (lower is better)
Translates to: RLESPPSDNHELECVVLARPHLL*HHPQDL
Trigger: AAGGTCCTGTGGGTGGTGTCAGAGCAGATGAGGCCT...GGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430644.5
CDS-3UTR TCA 90 bp AGCGGCGCCTTGAATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTGGTCCTGCTTTTGTCGGGCTTaGGAGGTGTGCAGACACTCG +
Preference number: 4 (lower is better)
Translates to: SGALNLHLVTTTNLSVWSCFCRA*EVCRHS
Trigger: CGAGTGTCTGCACACCTCTCAAGCCCGACAAAAGCA...GGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGGCGCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430644.5
CDS-3UTR TCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTTGCTTTTGTCGGGCTTaGGAGGTGTGCAGACACTCG +
Preference number: 4 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSCFCRA*EVCRHS
Trigger: CGAGTGTCTGCACACCTCTCAAGCCCGACAAAAGCA...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp AGCTCCTGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCGAGGTTCGGGAGACCTaGTGCATACTGAGGACACGG +
Preference number: 4 (lower is better)
Translates to: SSCRLSSKHRCVRRASRAEVRET*CILRTR
Trigger: CCGTGTCCTCAGTATGCATCAGGTCTCCCGAACCTC...GGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR GCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTTACACTCCAGGCAGATaGTCACCTGCTCGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRYTPGR*SPARRC
Trigger: GCAGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTA...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGCCCGCGCAGTTTGCTaGTGTTACACTCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRARAVC*CYTPGR
Trigger: TCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGGC...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR GCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGATGAACTTCTTCAGATaGAAGACGGTCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRMNFFR*KTVAWA
Trigger: AGCCCAGGCGACCGTCTTGCATCTGAAGAAGTTCAT...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCGGCTACTGGCCTTGCTaGTCCGTGGGAGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLGYWPC*SVGGMW
Trigger: CCACATTCCTCCCACGGAGCAGCAAGGCCAGTAGCC...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CCA 90 bp CAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCACCTCTATGTACTGCAGGGGGTaGCTCTGGTGGATCACAATC +
Preference number: 4 (lower is better)
Translates to: QILPTDARRALILTTTTSMYCRG*LWWITI
Trigger: GATTGTGATCCACCAGAGCCACCCCCTGCAGTACAT...AGAGGTGGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp CAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCTCCACAGGAAATAAATaGGAACAGCCCGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QVSIRAEPQPDGWHLPVSSTGNK*EQPGGE
Trigger: TTCTCCACCGGGCTGTTCCCATTTATTTCCTGTGGA...GCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CCA 90 bp GAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGCACGGGGTGGGAATCTCCAAGGTGGTTaGCTTCTTGGAAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: EPCCLEHHSPCKAEARGGNLQGG*LLGKPE
Trigger: TTCAGGCTTTCCAAGAAGCCAACCACCTTGGAGATT...CCCACCCCGTGCTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAACGTGGGACTAGGTTaGCTTGTACCCAGAACGTCC +
Preference number: 4 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCNVGLG*LVPRTS
Trigger: GGACGTTCTGGGTACAAGCCAACCTAGTCCCACGTT...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp TCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCTCTGCCCCTGGTCCTaGTTCCTGCTTTTGTCGGGC +
Preference number: 4 (lower is better)
Translates to: SCLNKMLPSHQETHTAVVLCPWS*FLLLSG
Trigger: GCCCGACAAAAGCAGGAACCAGGACCAGGGGCAGAG...GACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp TGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTGGGTCTGTAGTGCAGATCGTCTCTGCCCCTaGTCCTGGTTCCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CGRCVAPFTASPSWVCSADRLCP*SWFLLL
Trigger: CAAAAGCAGGAACCAGGACCAGGGGCAGAGACGATC...TGCACTACAGACCCAAGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTGGGTCATCAGAACATaGGCTAAAACAGATAATTTT +
Preference number: 4 (lower is better)
Translates to: QETHTAVVHTSRAASHGAWVIRT*AKTDNF
Trigger: AAAATTATCTGTTTTAGCCCATGTTCTGATGACCCA...GGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CGATGGGAATCTAAGTGCTGTTTTGCAGAGCAGGTCTCCCCCTTGATGTCTCCCCAGTCAGGGAGCTGCTaGAAAGCAAGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RWESKCCFAEQVSPLMSPQSGSC*KASRGS
Trigger: GCTCCCTCTGCTTGCTTTCCAGCAGCTCCCTGACTG...GGGAGACATCAAGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATTCCCATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR CAA 72 bp GGCGCCTTGAATCTCCACCTAGTGACAACCACGAACTaGAGTGTGTGGTCCTTGCCCAGGATCTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GALNLHLVTTTN*SVWSLPRISSL
Trigger: CAACGAGGAGATCCTGGGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430644.5
CDS-3UTR TCA 90 bp TGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCAGGGCGCGCGGCCTCTTTGTTTaGACTGTCGTCTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: CRLSSKHRCVRRASRARARGLFV*TVVCFG
Trigger: ACCAAAGCAGACGACAGTTCAAACAAAGAGGCCGCG...CGCCCTGGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCGCAAGCTTAGGTAACTaGGTAACTCAAACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: HQQILPTDARRALILTTTASLGN*VTQTVL
Trigger: CAGGACGGTTTGAGTTACTCAGTTACCTAAGCTTGC...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp TCACCATTCCGATGGGAATCTAAGTGCTGTTTTGCAGAGCAGGTCTCCCCCTTGGGAAACTGCCAGCAGTaGGCACTGTCACAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: SPFRWESKCCFAEQVSPLGNCQQ*ALSQRL
Trigger: TAGCCGCTGTGACAGTGCTCACTGCTGGCAGTTTCC...CAAGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATTCCCATCGGAATGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGCCAGGATCTCCTCGTTaGATAAAATGTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRPGSPR*IKCPAR
Trigger: ACGAGCTGGACATTTTATGCAACGAGGAGATCCTGG...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR GCA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGGACTCAGAACCGTGTTaGCTGGAGCATCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRDSEPC*LEHHSP
Trigger: GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTC...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGCTGAGTGAGTCCAAGTaGCGACCTCACACAATGAAA +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRLSESK*RPHTMK
Trigger: TTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAG...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp TGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCAGGGCGCAGATTCAGCTGAAATaGAGCTTCTGCAGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: CRLSSKHRCVRRASRARAQIQLK*SFCRAG
Trigger: CCCCGCTCTGCAGAAGCTGCATTTCAGCTGAATCTG...CGCCCTGGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CCA 90 bp TCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCTCTGAGCACGACGCCTaGGGTCCCTGCTACATTGTG +
Preference number: 4 (lower is better)
Translates to: SCLNKMLPSHQETHTAVVSEHDA*GPCYIV
Trigger: CACAATGTAGCAGGGACCCCAGGCGTCGTGCTCAGA...GACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp TCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCAGGGGGTGGCTCTGGTaGATCACAATCCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SCLNKMLPSHQETHTAVVRGWLW*ITILQV
Trigger: CACCTGCAGGATTGTGATCCACCAGAGCCACCCCCT...GACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp TCCTCCAGGTACTTCACCAGGCAGCTCCTGCAGACTGTCATCAAAGCACAGGTGATGTACTGCAGGGGGTaGCTCTGGTGGATCACAATC +
Preference number: 4 (lower is better)
Translates to: SSRYFTRQLLQTVIKAQVMYCRG*LWWITI
Trigger: GATTGTGATCCACCAGAGCCACCCCCTGCAGTACAT...CACCTGTGCTTTGATGACAGTCTGCAGGAGCTGCCTGGTGAAGTACCTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTATGTACTGCAGGGGGTaGCTCTGGTGGATCACAATC +
Preference number: 4 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSMYCRG*LWWITI
Trigger: GATTGTGATCCACCAGAGCCACCCCCTGCAGTACAT...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTTCTGTGGGCGCTGTGTaGCACCATTCACAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRSVGAV*HHSQQV
Trigger: GACTTGCTGTGAATGGTGCCACACAGCGCCCACAGA...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR CCA 90 bp TTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCTCCACAGGAAATAAATaGGAACAGCCCGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LQKQGHHWLKTSTRAPLASTGNK*EQPGGE
Trigger: TTCTCCACCGGGCTGTTCCCATTTATTTCCTGTGGA...GGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTAACGTGGGACTAGGTTaGCTTGTACCCAGAACGTCC +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCNVGLG*LVPRTS
Trigger: GGACGTTCTGGGTACAAGCCAACCTAGTCCCACGTT...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CCA 90 bp CACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGCAGTTGACACACCTATaGGAATCAGTAAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HPEAMFLSAAAGSTQGCEQLTHL*ESVSSF
Trigger: AAAAGAACTTACTGATTCCCATAGGTGTGTCAACTG...CTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp CCGTCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGACTCCTCTGGAGATTTaGAAACTGCCAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PSAVATLRKTLRSSPRCETPLEI*KLPAVS
Trigger: GCTCACTGCTGGCAGTTTCCAAATCTCCAGAGGAGT...CTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCACCTCTAAGGTGACAGAGCTGTaGGTCATCAGAACATGGGCT +
Preference number: 4 (lower is better)
Translates to: QILPTDARRALILTTTTSKVTEL*VIRTWA
Trigger: AGCCCATGTTCTGATGACCCACAGCTCTGTCACCTT...AGAGGTGGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR TCA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGCGCGGCCTCTTTGTTTaGACTGTCGTCTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRRGLFV*TVVCFG
Trigger: ACCAAAGCAGACGACAGTTCAAACAAAGAGGCCGCG...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTCGCGGCCTCTTTGTTTaGACTGTCGTCTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRRGLFV*TVVCFG
Trigger: ACCAAAGCAGACGACAGTTCAAACAAAGAGGCCGCG...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR TCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTAATGTGACAAAAACATaGCCATCCGGGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCNVTKT*PSGRRG
Trigger: CCCTCTCCTCCCGGATGGTCATGTTTTTGTCACATT...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTAGGGACTTCTGCTGCTaGGGTTTTGTCAGGTTAACG +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCRDFCC*GFVRLT
Trigger: CGTTAACCTGACAAAACCTCAGCAGCAGAAGTCCCT...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR TCA 90 bp TTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCAGACTGTCTGCACGATaGACTCCTAGAAAAATAGGG +
Preference number: 4 (lower is better)
Translates to: LQKQGHHWLKTSTRAPLARLSAR*TPRKIG
Trigger: CCCTATTTTTCTAGGAGTTCATCGTGCAGACAGTCT...GGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp CTGGCTGAAGACATCGACACGGGCGCCACTCGCCCGTCTGTGTATTTAAATCTAGGTTTGCAAGCAGGGTaGCAGTTTACAAATGCCGCC +
Preference number: 4 (lower is better)
Translates to: LAEDIDTGATRPSVYLNLGLQAG*QFTNAA
Trigger: GGCGGCATTTGTAAACTGTCACCCTGCTTGCAAACC...TAGATTTAAATACACAGACGGGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp AATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCACAGGACCTTTAGCGTaGAATGACTTTTCTGACTTA +
Preference number: 4 (lower is better)
Translates to: NAPQPSRDAHSGRPHQQGTGPLA*NDFSDL
Trigger: TAAGTCAGAAAAGTCATTTCACGCTAAAGGTCCTGT...GCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTATGAACTTCTTCAGATaGAAGACGGTCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCMNFFR*KTVAWA
Trigger: AGCCCAGGCGACCGTCTTGCATCTGAAGAAGTTCAT...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR GCA 90 bp TTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACGACTCAGAACCGTGTTaGCTGGAGCATCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: FKQNAPQPSRDAHSGRPHDSEPC*LEHHSP
Trigger: GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTC...GTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp GACTCATCAGGTGTGAGGACGCACATCAGGTGTGAAGAACACACTGGAAGGTTCTGCTCACCCTGTCCCTaGAGCTCTGAAAAACGCCCT +
Preference number: 4 (lower is better)
Translates to: DSSGVRTHIRCEEHTGRFCSPCP*SSEKRP
Trigger: AGGGCGTTTTTCAGAGCTGCAGGGACAGGGTGAGCA...GAACCTTCCAGTGTGTTCTTCACACCTGATGTGCGTCCTCACACCTGATGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR GCA 90 bp CGATGGGAATCTAAGTGCTGTTTTGCAGAGCAGGTCTCCCCCTTGATGTCTCCCTGTGCAGATGCTCACTaGTGTCCTCCTTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RWESKCCFAEQVSPLMSPCADAH*CPPCGS
Trigger: AGAGCCACAAGGAGGACAGCAGTGAGCATCTGCACA...GGGAGACATCAAGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATTCCCATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp CGCCTTGAATCTCCACCTAGTGACAACCACGAACTTGAGTGTGTGGTCCTTGCCACGAACTTGAGTGTGTaGTCCTTGCCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RLESPPSDNHELECVVLATNLSV*SLPRIS
Trigger: GGAGATCCTGGGCAAGGACCACACACTCAAGTTCGT...GGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430644.5
CDS-3UTR CCA 90 bp TGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCAGGGCGGAGGACGATCGGCTCTaGGAGACTGTGAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: CRLSSKHRCVRRASRARAEDDRL*ETVKCF
Trigger: AAAACACTTCACAGTCTCCCAGAGCCGATCGTCCTC...CGCCCTGGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCCTTGGAAAGCCTGAATaGTGGCCAAGGACCACCTGG +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLLGKPE*WPRTTW
Trigger: CCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp GACTCATCAGGTGTGAGGACGCACATCAGGTGTGAAGAACACACTGGAAGGTTCTCCGTGGGAGGAATGTaGGGTCTCTCCTGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: DSSGVRTHIRCEEHTGRFSVGGM*GLSCVS
Trigger: CGAAACACAGGAGAGACCCCACATTCCTCCCACGGA...GAACCTTCCAGTGTGTTCTTCACACCTGATGTGCGTCCTCACACCTGATGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTACTCCTCTGGAGATTTaGAAACTGCCAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITTPLEI*KLPAVS
Trigger: GCTCACTGCTGGCAGTTTCCAAATCTCCAGAGGAGT...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
3UTR CAA 72 bp GCCTTCTTGAATCTCCACCTAGTGACAACCACGAACTaGAGTGTGTGGTCCTTGCCCAGGATCTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: AFLNLHLVTTTN*SVWSLPRISSL
Trigger: CAACGAGGAGATCCTGGGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR TCA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGCCTTTTTCTGTGAAATaGGAGGTTGACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRPFSVK*EVDRKE
Trigger: TTCCTTTCTGTCAACCTCTCATTTCACAGAAAAAGG...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp CCTCAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCACAGGACCTTTAGCGTaGAATGACTTTTCTGACTTA +
Preference number: 4 (lower is better)
Translates to: PQVSIRAEPQPDGWHLPVTGPLA*NDFSDL
Trigger: TAAGTCAGAAAAGTCATTTCACGCTAAAGGTCCTGT...GACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp AGATCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGAACACGGGCGTCTCTaGGCTCGTTTCTGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RSCLNKMLPSHQETHTAVEHGRL*ARFCAD
Trigger: ATCTGCACAGAAACGAGCTCAGAGACGCCCGTGTTC...GACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp CAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCACCTCTGAAGACAATGACAACTaGAGGACAACACCTCAACCA +
Preference number: 4 (lower is better)
Translates to: QILPTDARRALILTTTTSEDNDN*RTTPQP
Trigger: TGGTTGAGGTGTTGTCCTGCAGTTGTCATTGTCTTC...AGAGGTGGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp TCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCTCACCAGGCAGCTCCTaGAGACTGTCATCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SCLNKMLPSHQETHTAVVSPGSS*RLSSKH
Trigger: GTGCTTTGATGACAGTCTGCAGGAGCTGCCTGGTGA...GACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTACAGCAAGTCCATCTTaGGTCTGTAGTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRTASPS*VCSAAG
Trigger: TCCTGCTGCACTACAGACCCAAGATGGACTTGCTGT...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR CCA 90 bp CAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCACCTCTAATCTCCAAGGTGGTTaGCTTCTTGGAAAGCCTGAA +
Preference number: 4 (lower is better)
Translates to: QILPTDARRALILTTTTSNLQGG*LLGKPE
Trigger: TTCAGGCTTTCCAAGAAGCCAACCACCTTGGAGATT...AGAGGTGGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTAGCAAATCGAGACATTaGTTAACCTGGGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITSKSRH*LTWEWG
Trigger: TCCCCACTCCCAGGTTAACCAATGTCTCGATTTGCT...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp AGATCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGATCGTCTCTGCCCCTaGTCCTGGTTCCTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RSCLNKMLPSHQETHTAVDRLCP*SWFLLL
Trigger: CAAAAGCAGGAACCAGGACCAGGGGCAGAGACGATC...GACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTCCCTCCTTCCGGCCCTaGCTCTTTTTCCATTTTCTA +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRPSFRP*LFFHFL
Trigger: TAGAAAATGGAAAAAGAGCCAGGGCCGGAAGGAGGG...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470161.6
CDS-3UTR TCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCAGGGACTTCTGCTGCTaGGGTTTTGTCAGGTTAACG +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLRDFCC*GFVRLT
Trigger: CGTTAACCTGACAAAACCTCAGCAGCAGAAGTCCCT...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTAGACTGTCTGCACGATaGACTCCTAGAAAAATAGGG +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCRLSAR*TPRKIG
Trigger: CCCTATTTTTCTAGGAGTTCATCGTGCAGACAGTCT...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR TCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTTTTACAAATGCCGCCTaGAGCAAATCGAGACATTGG +
Preference number: 4 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSFTNAA*SKSRHW
Trigger: CCAATGTCTCGATTTGCTTCAGGCGGCATTTGTAAA...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp CTGGCTGAAGACATCGACACGGGCGCCACTCGCCCGTCTGTGTATTTAAATCTACTGGACCAATTTAAATaGGGGTTTGCAAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LAEDIDTGATRPSVYLNLLDQFK*GFASRV
Trigger: CACCCTGCTTGCAAACCCTCATTTAAATTGGTCCAG...TAGATTTAAATACACAGACGGGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp GAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCCATTCATTTGTCAGTTaGCACACCTATGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: ELVSEGDSEPCCLEHHSPHSFVS*HTYGNQ
Trigger: CTGATTCCCATAGGTGTGTCAACTGACAAATGAATG...GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp AGCTCCTGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCTGGTCTCAGGAGCAATaGGAAGGTTTTAATTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSCRLSSKHRCVRRASRAWSQEQ*EGFNCP
Trigger: GGGGCAATTAAAACCTTCTCATTGCTCCTGAGACCA...GGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp AAGACCTGGAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTCGATGGGAATCTAAGTaGTGTTTTGCAGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: KTWKASRGSSCQKVTQNRRWESK*CFAEQV
Trigger: GACCTGCTCTGCAAAACAGCACTTAGATTCCCATCG...ACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTCCAGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR GCA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGCCAGGATCTCCTCGTTaGATAAAATGTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRPGSPR*IKCPAR
Trigger: ACGAGCTGGACATTTTATGCAACGAGGAGATCCTGG...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR GCA 90 bp GAAAGCAAGCAGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAAGACAATGACAACTaGAGGACAACACCTCAACCA +
Preference number: 4 (lower is better)
Translates to: ESKQRELVSEGDSEPCCLEDNDN*RTTPQP
Trigger: TGGTTGAGGTGTTGTCCTGCAGTTGTCATTGTCTTC...CAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCTGCTTGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGAAACAATATCTTGCATaGTTCTGTCATGACCGATGT +
Preference number: 4 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRKQYLA*FCHDRC
Trigger: ACATCGGTCATGACAGAACCATGCAAGATATTGTTT...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp GTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAAACAATATCTTGCATaGTTCTGTCATGACCGATGT +
Preference number: 4 (lower is better)
Translates to: VSIRAEPQPDGWHLPVSGKQYLA*FCHDRC
Trigger: ACATCGGTCATGACAGAACCATGCAAGATATTGTTT...ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGCTCATTTCCGCTTCTTaGAGGCCTGGTACCAATTTG +
Preference number: 4 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRLISAS*RPGTNL
Trigger: CAAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAG...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp CGATGGGAATCTAAGTGCTGTTTTGCAGAGCAGGTCTCCCCCTTGATGTCTCCCCTCATTTCCGCTTCTTaGAGGCCTGGTACCAATTTG +
Preference number: 4 (lower is better)
Translates to: RWESKCCFAEQVSPLMSPLISAS*RPGTNL
Trigger: CAAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAG...GGGAGACATCAAGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATTCCCATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGTCTGGTAGCAAATGCTaGACCAATTTAAATGAGGGT +
Preference number: 4 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRSGSKC*TNLNEG
Trigger: ACCCTCATTTAAATTGGTCCAGCATTTGCTACCAGA...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp AGCTCCTGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCCCTGGTCAACATCTTTaGCTTCTGGTCACAGAGACT +
Preference number: 4 (lower is better)
Translates to: SSCRLSSKHRCVRRASRAPGQHL*LLVTET
Trigger: AGTCTCTGTGACCAGAAGCCAAAGATGTTGACCAGG...GGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
3UTR CAA 72 bp CACCTAGTGACAACCACGAACTTGAGTGTGTGGTCCTaGCCCAGGATCTCCTCGTTGCATAAAATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HLVTTTNLSVWS*PRISSLHKMSS
Trigger: GCTGGACATTTTATGCAACGAGGAGATCCTGGGCAAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTATAAAGCTGGACCACTaGAACCAAACAATTGGATGG +
Preference number: 4 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSIKLDH*NQTIGW
Trigger: CCATCCAATTGTTTGGTTTCAGTGGTCCAGCTTTAT...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTATAAAGCTGGACCACTaGAACCAAACAATTGGATGG +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCIKLDH*NQTIGW
Trigger: CCATCCAATTGTTTGGTTTCAGTGGTCCAGCTTTAT...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR GCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTTATGTCCATGAAAACTaGATCGGTGAGACCGTATTC +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCYVHEN*IGETVF
Trigger: GAATACGGTCTCACCGATGCAGTTTTCATGGACATA...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CCA 90 bp ACTCCAGGCAGATGCTCACCTGCTCGTCGCTGCGGTGGTAGTCGTTGTCCTCCTTGGGTCATCAGAACATaGGCTAAAACAGATAATTTT +
Preference number: 4 (lower is better)
Translates to: TPGRCSPARRCGGSRCPPWVIRT*AKTDNF
Trigger: AAAATTATCTGTTTTAGCCCATGTTCTGATGACCCA...AGGAGGACAACGACTACCACCGCAGCGACGAGCAGGTGAGCATCTGCCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR TCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCAAACACAGATTCAGCTaGAATGCAGCTTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLKHRFS*NAASAE
Trigger: CTCTGCAGAAGCTGCATTTCAGCTGAATCTGTGTTT...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR TCA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTCCTTTTTCTGTGAAATaGGAGGTTGACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCPFSVK*EVDRKE
Trigger: TTCCTTTCTGTCAACCTCTCATTTCACAGAAAAAGG...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR TCA 90 bp TCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGTCCACAGGACCTTTAGCGTaGAATGACTTTTCTGACTTA +
Preference number: 4 (lower is better)
Translates to: SAVATLRKTLRSSPRCESTGPLA*NDFSDL
Trigger: TAAGTCAGAAAAGTCATTTCACGCTAAAGGTCCTGT...GGACTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR GCA 90 bp GTTCTAACGTTACACTTAAAACTGCACTGTGATAACACACGGTTGTACAGAATGAGACGGCAGGGCCATTaGGCTCCAGCCTCCAACGAC +
Preference number: 4 (lower is better)
Translates to: VLTLHLKLHCDNTRLYRMRRQGH*APASND
Trigger: GTCGTTGGAGGCTGGAGCGCAATGGCCCTGCCGTCT...CATTCTGTACAACCGTGTGTTATCACAGTGCAGTTTTAAGTGTAACGTTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR GCA 90 bp CTGGCTGAAGACATCGACACGGGCGCCACTCGCCCGTCTGTGTATTTAAATCTATATGTCCATGAAAACTaGATCGGTGAGACCGTATTC +
Preference number: 4 (lower is better)
Translates to: LAEDIDTGATRPSVYLNLYVHEN*IGETVF
Trigger: GAATACGGTCTCACCGATGCAGTTTTCATGGACATA...TAGATTTAAATACACAGACGGGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp GTTCTAACGTTACACTTAAAACTGCACTGTGATAACACACGGTTGTACAGAATGTGCAAGACGGTCGCCTaGGCTGAGCAGCGGATCCAC +
Preference number: 4 (lower is better)
Translates to: VLTLHLKLHCDNTRLYRMCKTVA*AEQRIH
Trigger: GTGGATCCGCTGCTCAGCCCAGGCGACCGTCTTGCA...CATTCTGTACAACCGTGTGTTATCACAGTGCAGTTTTAAGTGTAACGTTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp TCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCAACATCTTTGGCTTCTaGTCACAGAGACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SCLNKMLPSHQETHTAVVNIFGF*SQRLPK
Trigger: CTTTGGAAGTCTCTGTGACCAGAAGCCAAAGATGTT...GACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR GCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCCACGGTTGTACAGAATaGTTCAGCAGTATGTGTATT +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLHGCTE*FSSMCI
Trigger: AATACACATACTGCTGAAGCATTCTGTACAACCGTG...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR GCA 90 bp CTGGCTGAAGACATCGACACGGGCGCCACTCGCCCGTCTGTGTATTTAAATCTAAACTCTGGTAGCAAATaGTGGACCAATTTAAATGAG +
Preference number: 4 (lower is better)
Translates to: LAEDIDTGATRPSVYLNLNSGSK*WTNLNE
Trigger: CTCATTTAAATTGGTCCAGCATTTGCTACCAGAGTT...TAGATTTAAATACACAGACGGGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR TCA 90 bp TCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCTTTGTCCTAAAAGATaGCAGTATCTTCTACGTACA +
Preference number: 4 (lower is better)
Translates to: SCLNKMLPSHQETHTAVVLCPKR*QYLLRT
Trigger: TGTACGTAGAAGATACTGTCATCTTTTAGGACAAAG...GACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCAAACAATATCTTGCATaGTTCTGTCATGACCGATGT +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLKQYLA*FCHDRC
Trigger: ACATCGGTCATGACAGAACCATGCAAGATATTGTTT...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CCA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCATTGTCGTAGGGAGATaGAACATTCATTTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLIVVGR*NIHLSV
Trigger: AACTGACAAATGAATGTTCCATCTCCCTACGACAAT...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CAA 72 bp ATGTCCAGCTCGTTAAAGGATGAAAGGTTGAGTTTTTaGGCGATGAACTTCTTCAGATGCAAGACGGTCGCC +
Preference number: 4 (lower is better)
Translates to: MSSSLKDERLSF*AMNFFRCKTVA
Trigger: GGCGACCGTCTTGCATCTGAAGAAGTTCATCGCCAAAAAACTCAACCTTTCATCCTTTAACGAGCTGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CCA 90 bp AGGAAGGATTCAATAAAAGTCCAACTACACTTGAGGCTTATCATGAAACCTAAACCTCAGACGCACTGTTaGGTGCGAAGGACACCTGGA +
Preference number: 4 (lower is better)
Translates to: RKDSIKVQLHLRLIMKPKPQTHC*VRRTPG
Trigger: TCCAGGTGTCCTTCGCACCCAACAGTGCGTCTGAGG...TTTAGGTTTCATGATAAGCCTCAAGTGTAGTTGGACTTTTATTGAATCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CAA 72 bp GGGCAGCAAATTGTCGTAGGGAGATGGAACATTCATTaGTCAGTTGACACACCTATGGGAATCAGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: GQQIVVGRWNIH*SVDTPMGISKF
Trigger: GAACTTACTGATTCCCATAGGTGTGTCAACTGACAAATGAATGTTCCATCTCCCTACGACAATTTGCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR GCA 90 bp GTTCTAACGTTACACTTAAAACTGCACTGTGATAACACACGGTTGTACAGAATGCAATACCCACAGCATTaGTCATCCCATGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VLTLHLKLHCDNTRLYRMQYPQH*SSHEQV
Trigger: GACTTGCTCATGGGATGAGCAATGCTGTGGGTATTG...CATTCTGTACAACCGTGTGTTATCACAGTGCAGTTTTAAGTGTAACGTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CCA 90 bp GTTCTAACGTTACACTTAAAACTGCACTGTGATAACACACGGTTGTACAGAATGATATGTGCAGGCATGTaGTCTGAGCGTACACATATG +
Preference number: 4 (lower is better)
Translates to: VLTLHLKLHCDNTRLYRMICAGM*SERTHM
Trigger: CATATGTGTACGCTCAGACCACATGCCTGCACATAT...CATTCTGTACAACCGTGTGTTATCACAGTGCAGTTTTAAGTGTAACGTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CAA 72 bp ACGTTACACTTAAAACTGCACTGTGATAACACACGGTaGTACAGAATGCTTCAGCAGTATGTGTATTTTGAG +
Preference number: 4 (lower is better)
Translates to: TLHLKLHCDNTR*YRMLQQYVYFE
Trigger: CTCAAAATACACATACTGCTGAAGCATTCTGTACAACCGTGTGTTATCACAGTGCAGTTTTAAGTGTAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000362003.9
3UTR CAA 72 bp TTCATCCTCTGTAAACGTGGTGCTGGTAGTGTCTTGTaGAGTGTGAATTCTCTCTCATACAAAAGTTATAAA +
Preference number: 4 (lower is better)
Translates to: FILCKRGAGSVL*SVNSLSYKSYK
Trigger: TTTATAACTTTTGTATGAGAGAGAATTCACACTCAACAAGACACTACCAGCACCACGTTTACAGAGGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS GCA 90 bp AGGGCGCGCCCTCCCTGGGTGGCGCGGGCAGGGCACGTACAGGTGTaGAGACACTCGGTCACCGTGGTGGCGTCGATGAGGTACCCGCTG +
Preference number: 5 (lower is better)
Translates to: RARPPWVARAGHVQV*RHSVTVVASMRYPL
Trigger: CAGCGGGTACCTCATCGACGCCACCACGGTGACCGAGTGTCTGCACACCTGTACGTGCCCTGCCCGCGCCACCCAGGGAGGGCGCGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400151.6
CDS GCA 90 bp TCTGCCGGGGCATGGAGGCTTCAGGCCAGCACTCCCACGCGACGCTaGCTCCTGGCTCCGCACGCGGACTCGCTTCTGCACCCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SAGAWRLQASTPTRR*LLAPHADSLLHPPS
Trigger: GGAAGGAGGGTGCAGAAGCGAGTCCGCGTGCGGAGCCAGGAGGCAGCGTCGCGTGGGAGTGCTGGCCTGAAGCCTCCATGCCCCGGCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000362003.9
ENST00000400151.6
ENST00000419774.5
ENST00000427463.5
ENST00000430644.5
ENST00000433814.5
ENST00000440452.5
ENST00000470161.6
ENST00000475288.5
ENST00000482726.5
ENST00000484141.5
CDS-3UTR CAA 90 bp GCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCAGAGCAGGTCTCCCCCTaGATGTCTCCCGGCACCTCC +
Preference number: 5 (lower is better)
Translates to: AGSTQGCEGPVCGRCVAPEQVSP*MSPGTS
Trigger: GGAGGTGCCGGGAGACATCAAGGGGGAGACCTGCTC...TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp CTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGTTCAGCCCGCGCAGTTaGCTGCTGTTACACTCCAGG +
Preference number: 5 (lower is better)
Translates to: LKRGGREHPRVRGPSLWAFSPRS*LLLHSR
Trigger: CCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAA...CGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp CGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTCAGCGGCTACTGGCCTaGCTGCTCCGTGGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RTQRSSTPAGPPAMGPQVQRLLA*LLRGRN
Trigger: ATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCTG...AACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp TTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTTGAGTGTGTGGTCCTaGCCCAGGATCTCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LSAAAGSTQGCEGPVCGRLSVWS*PRISSL
Trigger: CAACGAGGAGATCCTGGGCAAGGACCACACACTCAA...GCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS TCA 90 bp CTCCCCTTCTCCTCCTCCCTGCGGGGCTGTGAGGTTCGGGAGACCTaGTGCATACTGAGGACACGGGAGCCTCCGCTAGACGTCCGCGTG +
Preference number: 5 (lower is better)
Translates to: LPFSSSLRGCEVRET*CILRTREPPLDVRV
Trigger: CACGCGGACGTCTAGCGGAGGCTCCCGTGTCCTCAGTATGCATCAGGTCTCCCGAACCTCACAGCCCCGCAGGGAGGAGGAGAAGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CAA 90 bp GCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCACCCAGGATCTCCTCGTaGCATAAAATGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: AGSTQGCEGPVCGRCVAPPRISS*HKMSSS
Trigger: CGAGCTGGACATTTTATGCAACGAGGAGATCCTGGG...TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp ACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTAGGAGCGGCGCCTTCTaGAATCTCCACCTAGTGACA +
Preference number: 5 (lower is better)
Translates to: THTAVVHTSRAASHGASGRSGAF*NLHLVT
Trigger: TGTCACTAGGTGGAGATTCAAGAAGGCGCCGCTCCT...ACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CAA 90 bp GTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTGAGCAGGTCTCCCCCTaGATGTCTCCCGGCACCTCC +
Preference number: 5 (lower is better)
Translates to: VSIRAEPQPDGWHLPVSGEQVSP*MSPGTS
Trigger: GGAGGTGCCGGGAGACATCAAGGGGGAGACCTGCTC...ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTTCAGCCCGCGCAGTTaGCTGCTGTTACACTCCAGG +
Preference number: 5 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLFSPRS*LLLHSR
Trigger: CCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAA...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTTTGAGTGTGTGGTCCTaGCCCAGGATCTCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSLSVWS*PRISSL
Trigger: CAACGAGGAGATCCTGGGCAAGGACCACACACTCAA...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp TTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCCGTTCCTGCAGGGCCTaGGCCACGTGGCCATTGCCC +
Preference number: 5 (lower is better)
Translates to: LQKQGHHWLKTSTRAPLARSCRA*ATWPLP
Trigger: GGGCAATGGCCACGTGGCCAAGGCCCTGCAGGAACG...GGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp ACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTCACTGCTGTCCTCCTaGTGGCTCTCAGCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: THTAVVHTSRAASHGASGSLLSS*WLSASE
Trigger: TTCAGAAGCTGAGAGCCACAAGGAGGACAGCAGTGA...ACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp TTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCGAGCAGGTCTCCCCCTaGATGTCTCCCGGCACCTCC +
Preference number: 5 (lower is better)
Translates to: LQKQGHHWLKTSTRAPLAEQVSP*MSPGTS
Trigger: GGAGGTGCCGGGAGACATCAAGGGGGAGACCTGCTC...GGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp CACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGTCCTCCGCGGCCTCTTaGTTTGAACTGTCGTCTGCT +
Preference number: 5 (lower is better)
Translates to: HPEAMFLSAAAGSTQGCESSAAS*FELSSA
Trigger: AGCAGACGACAGTTCAAACAAAGAGGCCGCGGAGGA...CTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGAGGAGCGGCGCCTTCTaGAATCTCCACCTAGTGACA +
Preference number: 5 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLRSGAF*NLHLVT
Trigger: TGTCACTAGGTGGAGATTCAAGAAGGCGCCGCTCCT...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp CACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGAGGAGCGGCGCCTTCTaGAATCTCCACCTAGTGACA +
Preference number: 5 (lower is better)
Translates to: HPEAMFLSAAAGSTQGCERSGAF*NLHLVT
Trigger: TGTCACTAGGTGGAGATTCAAGAAGGCGCCGCTCCT...CTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp GCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCAAAACCGTCCTGGGAGTaGATGGGCTTAAAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: AGSTQGCEGPVCGRCVAPKPSWE*MGLKKE
Trigger: CTCTTTCTTTAAGCCCATCAACTCCCAGGACGGTTT...TGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CAA 90 bp GGCACCTGCCCGTCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCCAGCGGCTACTGGCCTaGCTGCTCCGTGGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: GTCPSAVATLRKTLRSSPQRLLA*LLRGRN
Trigger: ATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCTG...GGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGACGGGCAGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp GAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCTCAAACTCCTCTGGAGATTaGGAAACTGCCAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: ETHTAVVHTSRAASHGASNSSGD*ETASSE
Trigger: CTCACTGCTGGCAGTTTCCAAATCTCCAGAGGAGTT...TGAGGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp CAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCCAGCCATGGGGCCCTGAAAGGAAACATCTaGCCGTTCTGGTCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: QETHTAVVHTSRAASHGALKGNI*PFWSQE
Trigger: CTCCTGAGACCAGAACGGCAAGATGTTTCCTTTCAG...GGCCCCATGGCTGGCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp CCGTCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGGAGCAGGTCTCCCCCTaGATGTCTCCCGGCACCTCC +
Preference number: 5 (lower is better)
Translates to: PSAVATLRKTLRSSPRCEEQVSP*MSPGTS
Trigger: GGAGGTGCCGGGAGACATCAAGGGGGAGACCTGCTC...CTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp ACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGATCCTCCGCGGCCTCTTaGTTTGAACTGTCGTCTGCT +
Preference number: 5 (lower is better)
Translates to: TPRGNVLKRGGREHPRVRSSAAS*FELSSA
Trigger: AGCAGACGACAGTTCAAACAAAGAGGCCGCGGAGGA...TCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCTTCAGCCCGCGCAGTTaGCTGCTGTTACACTCCAGG +
Preference number: 5 (lower is better)
Translates to: NAPQPSRDAHSGRPHQQGFSPRS*LLLHSR
Trigger: CCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAA...GCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp GGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGTGACAACCACGAACTaGAGTGTGTGGTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: GPPAMGPQVSIRAEPQPDVTTTN*SVWSLP
Trigger: GGGCAAGGACCACACACTCAAGTTCGTGGTTGTCAC...ATCAGGCTGAGGCTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp ACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGTGACAACCACGAACTaGAGTGTGTGGTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: TPRGNVLKRGGREHPRVRVTTTN*SVWSLP
Trigger: GGGCAAGGACCACACACTCAAGTTCGTGGTTGTCAC...TCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCAGGGCAGCTCCGCTCTaGTGGTCTGAGGCCACATGG +
Preference number: 5 (lower is better)
Translates to: HQQILPTDARRALILTTTRAAPL*WSEATW
Trigger: CCATGTGGCCTCAGACCACAAGAGCGGAGCTGCCCT...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTCGTTCCTGCAGGGCCTaGGCCACGTGGCCATTGCCC +
Preference number: 5 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCRSCRA*ATWPLP
Trigger: GGGCAATGGCCACGTGGCCAAGGCCCTGCAGGAACG...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CAA 90 bp GGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATAGCAGGAGCGGCGCCTaGAATCTCCACCTAGTGACA +
Preference number: 5 (lower is better)
Translates to: GARAQSVGAVWHHSQQVHSRSGA*NLHLVT
Trigger: TGTCACTAGGTGGAGATTCAAGGCGCCGCTCCTGCT...ATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430644.5
CDS CCA 90 bp CCAGCAGTGAGCACTGTCACAGCGGCTACTGGCCTTGCTGCTCCGTaGGAGGAATGTGGGGTCTCTCCTGTGTTTCGCTCTCCTAAGCGA +
Preference number: 5 (lower is better)
Translates to: PAVSTVTAATGLAAP*EECGVSPVFRSPKR
Trigger: TCGCTTAGGAGAGCGAAACACAGGAGAGACCCCACATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCTGTGACAGTGCTCACTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGAATCTAAGTGCTGTTTaGCAGAGCAGGTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLNLSAV*QSRSPP
Trigger: AGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATT...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGTTCAGCCCGCGCAGTTaGCTGCTGTTACACTCCAGG +
Preference number: 5 (lower is better)
Translates to: KCSPAIKRRTQRSSTPAGFSPRS*LLLHSR
Trigger: CCTGGAGTGTAACAGCAGCAAACTGCGCGGGCTGAA...CCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp GCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACCAGCAGGGCCGCGGTGCTGGTAGTGTCTaGTTGAGTGTGAATTCTCTC +
Preference number: 5 (lower is better)
Translates to: APQPSRDAHSGRPHQQGRGAGSV*LSVNSL
Trigger: GAGAGAATTCACACTCAACAAGACACTACCAGCACC...GCGGCCCTGCTGGTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTGGTGCTGGTAGTGTCTaGTTGAGTGTGAATTCTCTC +
Preference number: 5 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSGAGSV*LSVNSL
Trigger: GAGAGAATTCACACTCAACAAGACACTACCAGCACC...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp GGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATTCCTGGTTCCTGCTTTaGTCGGGCTTGAGAGGTGTG +
Preference number: 5 (lower is better)
Translates to: GARAQSVGAVWHHSQQVHSWFLL*SGLRGV
Trigger: CACACCTCTCAAGCCCGACAAAAGCAGGAACCAGGA...ATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp AGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTTCACTGCTGTCCTCCTaGTGGCTCTCAGCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RAEPQPDGWHLPVSGSHTSLLSS*WLSASE
Trigger: TTCAGAAGCTGAGAGCCACAAGGAGGACAGCAGTGA...AGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp GAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGCACGGGGTGGGTCCTGGTCAACATCTTaGGCTTCTCCGCTAGACGTC +
Preference number: 5 (lower is better)
Translates to: EPCCLEHHSPCKAEARGGSWSTS*ASPLDV
Trigger: GACGTCTAGCGGAGAAGCCAAAGATGTTGACCAGGA...CCCACCCCGTGCTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR CAA 90 bp CAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGTGACAACCACGAACTaGAGTGTGTGGTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: QVSIRAEPQPDGWHLPVSVTTTN*SVWSLP
Trigger: GGGCAAGGACCACACACTCAAGTTCGTGGTTGTCAC...GCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp GGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTGCTGGTAGTGTCTTGTaGAGTGTGAATTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: GNVLKRGGREHPRVRGPSAGSVL*SVNSLS
Trigger: TGAGAGAGAATTCACACTCAACAAGACACTACCAGC...ACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp CACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGTGCTGGTAGTGTCTaGTTGAGTGTGAATTCTCTC +
Preference number: 5 (lower is better)
Translates to: HPEAMFLSAAAGSTQGCEGAGSV*LSVNSL
Trigger: GAGAGAATTCACACTCAACAAGACACTACCAGCACC...CTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AGCTTCTGCAGAGCGGGGGCCGGCTTCCCTCCTAGCCCTTCAGCTGCTCACCCTGGTGCTGGTAGTGTCTaGTTGAGTGTGAATTCTCTC +
Preference number: 5 (lower is better)
Translates to: SFCRAGAGFPPSPSAAHPGAGSV*LSVNSL
Trigger: GAGAGAATTCACACTCAACAAGACACTACCAGCACC...AGGGTGAGCAGCTGAAGGGCTAGGAGGGAAGCCGGCCCCCGCTCTGCAGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CAA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTAGGGCAGCTCCGCTCTaGTGGTCTGAGGCCACATGG +
Preference number: 5 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCRAAPL*WSEATW
Trigger: CCATGTGGCCTCAGACCACAAGAGCGGAGCTGCCCT...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CAA 90 bp TCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGTCCCAGCGGCTACTGGCCTaGCTGCTCCGTGGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: SAVATLRKTLRSSPRCESQRLLA*LLRGRN
Trigger: ATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCTG...GGACTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp ACACCAGCAGGGCCGCCAGCCATGGGGCCTCAGGTTAGCATAAGAGCCGAGCCTCTGGAAGGTTCCCCTTaGAAGGATCTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: TPAGPPAMGPQVSIRAEPLEGSP*KDLRNS
Trigger: GGAGTTCCTTAGATCCTTCAAAGGGGAACCTTCCAG...AGGCTCGGCTCTTATGCTAACCTGAGGCCCCATGGCTGGCGGCCCTGCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp AGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCAGGGCGCCCACCCCATCGGCGTCTGGAAGGTTCCCCTTaGAAGGATCTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: STGVLGERLEPGRPPHRRLEGSP*KDLRNS
Trigger: GGAGTTCCTTAGATCCTTCAAAGGGGAACCTTCCAG...ACGCCGATGGGGTGGGCGCCCTGGCTCTAGACGCTCTCCTAACACACCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS TCA 90 bp CTTGGACTCTCACAGGAGGGGCCAGGAAAACTCGGCAGTGAACCGTaGACACTGCATCGTGTCCTGACCAGCTGGCTCCTAATGATCGCC +
Preference number: 5 (lower is better)
Translates to: LGLSQEGPGKLGSEP*TLHRVLTSWLLMIA
Trigger: GGCGATCATTAGGAGCCAGCTGGTCAGGACACGATGCAGTGTTCACGGTTCACTGCCGAGTTTTCCTGGCCCCTCCTGTGAGAGTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475288.5
CDS TCA 90 bp GCTGGACCTTGGACTCTCACAGGAGGGGCCAGGAAAACTCGGCAGTaGACCGTGAACACTGCATCGTGTCCTGACCAGCTGGCTCCTAAT +
Preference number: 5 (lower is better)
Translates to: AGPWTLTGGARKTRQ*TVNTASCPDQLAPN
Trigger: ATTAGGAGCCAGCTGGTCAGGACACGATGCAGTGTTCACGGTTCACTGCCGAGTTTTCCTGGCCCCTCCTGTGAGAGTCCAAGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475288.5
CDS-3UTR CAA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGTCCTGGTCAACATCTTaGGCTTCTCCGCTAGACGTC +
Preference number: 5 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRSWSTS*ASPLDV
Trigger: GACGTCTAGCGGAGAAGCCAAAGATGTTGACCAGGA...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp GTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTTCCTGGTCAACATCTTaGGCTTCTCCGCTAGACGTC +
Preference number: 5 (lower is better)
Translates to: VSIRAEPQPDGWHLPVSGSWSTS*ASPLDV
Trigger: GACGTCTAGCGGAGAAGCCAAAGATGTTGACCAGGA...ACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400151.6
ENST00000430644.5
CDS-3UTR CAA 90 bp CCCGCGCAGTTTGCTGCTGTTACACTCCAGGCAGATGCTCACCTGCTCGTCGCTTCCTGGTCAACATCTTaGGCTTCTCCGCTAGACGTC +
Preference number: 5 (lower is better)
Translates to: PAQFAAVTLQADAHLLVASWSTS*ASPLDV
Trigger: GACGTCTAGCGGAGAAGCCAAAGATGTTGACCAGGA...AGCGACGAGCAGGTGAGCATCTGCCTGGAGTGTAACAGCAGCAAACTGCGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430644.5
CDS-3UTR CAA 90 bp AATGTTCTTAAGCGCGGCGGCCGGGAGCACCCAAGGGTGCGAGGGCCCAGTCTGGCTGGTAGTGTCTTGTaGAGTGTGAATTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: NVLKRGGREHPRVRGPSLAGSVL*SVNSLS
Trigger: TGAGAGAGAATTCACACTCAACAAGACACTACCAGC...CAGACTGGGCCCTCGCACCCTTGGGTGCTCCCGGCCGCCGCGCTTAAGAACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp TTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCCAACGTGGGACTAGGTaGGCTTGTACCCAGAACGTC +
Preference number: 5 (lower is better)
Translates to: LQKQGHHWLKTSTRAPLAQRGTR*ACTQNV
Trigger: GACGTTCTGGGTACAAGCCAACCTAGTCCCACGTTG...GGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTTCCTCAGACGCACTGTaGGGTGCGAAGGACACCTGG +
Preference number: 5 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCSSDAL*GAKDTW
Trigger: CCAGGTGTCCTTCGCACCCAACAGTGCGTCTGAGGA...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CAA 90 bp GGTGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATAACTCCTCTGGAGATTaGGAAACTGCCAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: GARAQSVGAVWHHSQQVHNSSGD*ETASSE
Trigger: CTCACTGCTGGCAGTTTCCAAATCTCCAGAGGAGTT...ATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp CCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCGGTAGCCACACTTAGACTGAAAGGAAACATCTaGCCGTTCTGGTCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: PSLSLMDGTCPSAVATLRLKGNI*PFWSQE
Trigger: CTCCTGAGACCAGAACGGCAAGATGTTTCCTTTCAG...TCTAAGTGTGGCTACCGCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS TCA 90 bp GAAGGATCTAAGGAACTCCTCTGGAGATTTGGAAACTGCCAGCAGTaGGCACTGTCACAGCGGCTACTGGCCTTGCTGCTCCGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: EGSKELLWRFGNCQQ*ALSQRLLALLLRGR
Trigger: CCTCCCACGGAGCAGCAAGGCCAGTAGCCGCTGTGACAGTGCTCACTGCTGGCAGTTTCCAAATCTCCAGAGGAGTTCCTTAGATCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp CACCAGCAAATCCTCCCCACGGATGCCAGGAGAGCTCTGATCCTAACCACCACCCCCAGGATCTCCTCGTaGCATAAAATGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: HQQILPTDARRALILTTTPRISS*HKMSSS
Trigger: CGAGCTGGACATTTTATGCAACGAGGAGATCCTGGG...GGTGGTGGTTAGGATCAGAGCTCTCCTGGCATCCGTGGGGAGGATTTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CAA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCTTGAGTGTGTGGTCCTaGCCCAGGATCTCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCLSVWS*PRISSL
Trigger: CAACGAGGAGATCCTGGGCAAGGACCACACACTCAA...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAGTTAGCCCCACTGCTGTaGAAAACGACGCATAAGGTG +
Preference number: 5 (lower is better)
Translates to: SLVHMTPRGNVLKRGGRELAPLL*KTTHKV
Trigger: CACCTTATGCGTCGTTTTCAACAGCAGTGGGGCTAA...CTCCCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp CAGGTTAGCATAAGAGCCGAGCCTCAGCCTGATGGATGGCACCTGCCCGTCAGCAACTCCTCTGGAGATTaGGAAACTGCCAGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: QVSIRAEPQPDGWHLPVSNSSGD*ETASSE
Trigger: CTCACTGCTGGCAGTTTCCAAATCTCCAGAGGAGTT...GCTGACGGGCAGGTGCCATCCATCAGGCTGAGGCTCGGCTCTTATGCTAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp TGCGAGGGCCCAGTCTGTGGGCGCTGTGTGGCACCATTCACAGCAAGTCCATCTTCTCATTTCCGCTTCTaGGAGGCCTGGTACCAATTT +
Preference number: 5 (lower is better)
Translates to: CEGPVCGRCVAPFTASPSSHFRF*EAWYQF
Trigger: AAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAGA...AGATGGACTTGCTGTGAATGGTGCCACACAGCGCCCACAGACTGGGCCCTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp AAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGTTGAGTGTGTGGTCCTaGCCCAGGATCTCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: KVTQNRVAWSITLPARLKLSVWS*PRISSL
Trigger: CAACGAGGAGATCCTGGGCAAGGACCACACACTCAA...CTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp GAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGCACGGGGTGGGGCTGGTAGTGTCTTGTaGAGTGTGAATTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: EPCCLEHHSPCKAEARGGAGSVL*SVNSLS
Trigger: TGAGAGAGAATTCACACTCAACAAGACACTACCAGC...CCCACCCCGTGCTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AGCTTCTGCAGAGCGGGGGCCGGCTTCCCTCCTAGCCCTTCAGCTGCTCACCCTAAAGTCCAACTACACTaGAGGCTTATCATGAAACCT +
Preference number: 5 (lower is better)
Translates to: SFCRAGAGFPPSPSAAHPKVQLH*RLIMKP
Trigger: AGGTTTCATGATAAGCCTCAAGTGTAGTTGGACTTT...AGGGTGAGCAGCTGAAGGGCTAGGAGGGAAGCCGGCCCCCGCTCTGCAGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTCAACGTGGGACTAGGTaGGCTTGTACCCAGAACGTC +
Preference number: 5 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCQRGTR*ACTQNV
Trigger: GACGTTCTGGGTACAAGCCAACCTAGTCCCACGTTG...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CAA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGTCTCATTTCCGCTTCTaGGAGGCCTGGTACCAATTT +
Preference number: 5 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRSHFRF*EAWYQF
Trigger: AAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAGA...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAATCTAAGTGCTGTTTaGCAGAGCAGGTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCNLSAV*QSRSPP
Trigger: AGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATT...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCAGGATCTCCTCGTaGCATAAAATGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSPRISS*HKMSSS
Trigger: CGAGCTGGACATTTTATGCAACGAGGAGATCCTGGG...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp GAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCAAGCAAATCGAGACATaGGTTAACCTGGGAGTGGGG +
Preference number: 5 (lower is better)
Translates to: ELVSEGDSEPCCLEHHSPKQIET*VNLGVG
Trigger: CCCCACTCCCAGGTTAACCAATGTCTCGATTTGCTT...GGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp CCGTCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGTCCTGGTCAACATCTTaGGCTTCTGGTCACAGAGAC +
Preference number: 5 (lower is better)
Translates to: PSAVATLRKTLRSSPRCESWSTS*ASGHRD
Trigger: GTCTCTGTGACCAGAAGCCAAAGATGTTGACCAGGA...CTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS-3UTR CAA 90 bp CCGTCAGCGGTAGCCACACTTAGAAAAACACTCAGGTCCAGCCCCAGGTGTGAGTCTCATTTCCGCTTCTaGGAGGCCTGGTACCAATTT +
Preference number: 5 (lower is better)
Translates to: PSAVATLRKTLRSSPRCESHFRF*EAWYQF
Trigger: AAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAGA...CTCACACCTGGGGCTGGACCTGAGTGTTTTTCTAAGTGTGGCTACCGCTGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp TGCAGACTGTCATCAAAGCACAGGTGTGTTAGGAGAGCGTCTAGAGCCAGGGCGAATCTAAGTGCTGTTTaGCAGAGCAGGTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: CRLSSKHRCVRRASRARANLSAV*QSRSPP
Trigger: AGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATT...CGCCCTGGCTCTAGACGCTCTCCTAACACACCTGTGCTTTGATGACAGTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTGTCAGGGAGCTGCTGTaGTGTTTCATAAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITVRELL*CFIRWE
Trigger: TTCCCACCTTATGAAACACAACAGCAGCTCCCTGAC...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp TACGCACATCTCAGGGGAACGCTCAAACTGCAGCTCGTTCCTCAGACGCACTGTTTAGCCCCACTGCTGTaGAAAACGACGCATAAGGTG +
Preference number: 5 (lower is better)
Translates to: YAHLRGTLKLQLVPQTHCLAPLL*KTTHKV
Trigger: CACCTTATGCGTCGTTTTCAACAGCAGTGGGGCTAA...ACAGTGCGTCTGAGGAACGAGCTGCAGTTTGAGCGTTCCCCTGAGATGTGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000620529.1
CDS-3UTR CAA 90 bp TTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCCACACTCCTGGTTCCTGCTTTaGTCGGGCTTGAGAGGTGTG +
Preference number: 5 (lower is better)
Translates to: FKQNAPQPSRDAHSGRPHSWFLL*SGLRGV
Trigger: CACACCTCTCAAGCCCGACAAAAGCAGGAACCAGGA...GTGTGGACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp GTTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCGCGGCACTCAACAATTaGGGGGAACAAGTAATTTTT +
Preference number: 5 (lower is better)
Translates to: VTKAGSPLAEDIDTGATRAALNN*GEQVIF
Trigger: AAAAATTACTTGTTCCCCCAAATTGTTGAGTGCCGC...GCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp AGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTAAACCGTCCTGGGAGTaGATGGGCTTAAAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: RELVSEGDSEPCCLEHHSKPSWE*MGLKKE
Trigger: CTCTTTCTTTAAGCCCATCAACTCCCAGGACGGTTT...AGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CAA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCTGTGATAACACACGGTaGTACAGAATGCTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCCDNTR*YRMLQQ
Trigger: CTGCTGAAGCATTCTGTACAACCGTGTGTTATCACA...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp CTTGGAAAGCCTGAATGGTGGCCAAGGACCACCTGGGCTCCCAAGGAGTGGAGGAGATGGAACATTCATTaGTCAGTTGACACACCTATG +
Preference number: 5 (lower is better)
Translates to: LGKPEWWPRTTWAPKEWRRWNIH*SVDTPM
Trigger: CATAGGTGTGTCAACTGACAAATGAATGTTCCATCT...CCTCCACTCCTTGGGAGCCCAGGTGGTCCTTGGCCACCATTCAGGCTTTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp TCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCGTCAATCTAAGTGCTGTTTaGCAGAGCAGGTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: SCLNKMLPSHQETHTAVVNLSAV*QSRSPP
Trigger: AGGGGGAGACCTGCTCTGCAAAACAGCACTTAGATT...GACGACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGGAAAGGTTGAGTTTTTaGGCGATGAACTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRERLSF*AMNFFR
Trigger: TCTGAAGAAGTTCATCGCCAAAAAACTCAACCTTTC...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp ATTGCCCCGTCAATGGGCTTCCTCAAAGAGGCAGGGTTAGGAATTAAGTGGGAACCCAGGATCTCCTCGTaGCATAAAATGTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: IAPSMGFLKEAGLGIKWEPRISS*HKMSSS
Trigger: CGAGCTGGACATTTTATGCAACGAGGAGATCCTGGG...TTCCCACTTAATTCCTAACCCTGCCTCTTTGAGGAAGCCCATTGACGGGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTGCTGGTAGTGTCTTGTaGAGTGTGAATTCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITAGSVL*SVNSLS
Trigger: TGAGAGAGAATTCACACTCAACAAGACACTACCAGC...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AGAAGTCTGGTCCACATGACACCCAGAGGCAATGTTCTTAAGCGCGGCGGCCGGAAAGTCCAACTACACTaGAGGCTTATCATGAAACCT +
Preference number: 5 (lower is better)
Translates to: RSLVHMTPRGNVLKRGGRKVQLH*RLIMKP
Trigger: AGGTTTCATGATAAGCCTCAAGTGTAGTTGGACTTT...CCGGCCGCCGCGCTTAAGAACATTGCCTCTGGGTGTCATGTGGACCAGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR CAA 90 bp TTACAAAAGCAGGGTCACCACTGGCTGAAGACATCGACACGGGCGCCACTCGCCTTTGTAAACAATATCTaGCATGGTTCTGTCATGACC +
Preference number: 5 (lower is better)
Translates to: LQKQGHHWLKTSTRAPLAFVNNI*HGSVMT
Trigger: GGTCATGACAGAACCATGCAAGATATTGTTTACAAA...GGCGAGTGGCGCCCGTGTCGATGTCTTCAGCCAGTGGTGACCCTGCTTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp CTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAAGTCCAACTACACTaGAGGCTTATCATGAAACCT +
Preference number: 5 (lower is better)
Translates to: LVSEGDSEPCCLEHHSPCKVQLH*RLIMKP
Trigger: AGGTTTCATGATAAGCCTCAAGTGTAGTTGGACTTT...GCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AGATCCTGTTTAAACAAAATGCTCCCCAGCCATCAAGAGACGCACACAGCGGTCCTGGAAGGTTCCCCTTaGAAGGATCTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: RSCLNKMLPSHQETHTAVLEGSP*KDLRNS
Trigger: GGAGTTCCTTAGATCCTTCAAAGGGGAACCTTCCAG...GACCGCTGTGTGCGTCTCTTGATGGCTGGGGAGCATTTTGTTTAAACAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS-3UTR CAA 90 bp AAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTCTCCCTGCAAGGCTGAAGGAAAGGTTGAGTTTTTaGGCGATGAACTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: KVTQNRVAWSITLPARLKERLSF*AMNFFR
Trigger: TCTGAAGAAGTTCATCGCCAAAAAACTCAACCTTTC...CTTCAGCCTTGCAGGGAGAGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp AGAGGGAGCTCGTGTCAGAAGGTGACTCAGAACCGTGTTGCCTGGAGCATCACTGAAAGGTTGAGTTTTTaGGCGATGAACTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: RGSSCQKVTQNRVAWSITERLSF*AMNFFR
Trigger: TCTGAAGAAGTTCATCGCCAAAAAACTCAACCTTTC...AGTGATGCTCCAGGCAACACGGTTCTGAGTCACCTTCTGACACGAGCTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362003.9
ENST00000430644.5
ENST00000440452.5
ENST00000470161.6
CDS-3UTR CAA 90 bp ATGACAACTGCAGGACAACACCTCAACCACTCCAGAAAACAGCCCTTGCTCCTCGCGGCACTCAACAATTaGGGGGAACAAGTAATTTTT +
Preference number: 5 (lower is better)
Translates to: MTTAGQHLNHSRKQPLLLAALNN*GEQVIF
Trigger: AAAAATTACTTGTTCCCCCAAATTGTTGAGTGCCGC...GAGGAGCAAGGGCTGTTTTCTGGAGTGGTTGAGGTGTTGTCCTGCAGTTGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000362003.9
ENST00000440452.5
CDS-3UTR CAA 90 bp GTTCTGAGTGAGTCCAAGTGCCGACCTCACACAATGAAAGGCGAACCAGTCAGGACATTCATTTGTCAGTaGACACACCTATGGGAATCA +
Preference number: 5 (lower is better)
Translates to: VLSESKCRPHTMKGEPVRTFICQ*THLWES
Trigger: TGATTCCCATAGGTGTGTCAACTGACAAATGAATGT...CCTGACTGGTTCGCCTTTCATTGTGTGAGGTCGGCACTTGGACTCACTCAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp GTTCTAACGTTACACTTAAAACTGCACTGTGATAACACACGGTTGTACAGAATGGTGACAACCACGAACTaGAGTGTGTGGTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: VLTLHLKLHCDNTRLYRMVTTTN*SVWSLP
Trigger: GGGCAAGGACCACACACTCAAGTTCGTGGTTGTCAC...CATTCTGTACAACCGTGTGTTATCACAGTGCAGTTTTAAGTGTAACGTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp GTTCTAACGTTACACTTAAAACTGCACTGTGATAACACACGGTTGTACAGAATGTCTCATTTCCGCTTCTaGGAGGCCTGGTACCAATTT +
Preference number: 5 (lower is better)
Translates to: VLTLHLKLHCDNTRLYRMSHFRF*EAWYQF
Trigger: AAATTGGTACCAGGCCTCCAAGAAGCGGAAATGAGA...CATTCTGTACAACCGTGTGTTATCACAGTGCAGTTTTAAGTGTAACGTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS-3UTR CAA 90 bp GTTCTAACGTTACACTTAAAACTGCACTGTGATAACACACGGTTGTACAGAATGGAAAGGTTGAGTTTTTaGGCGATGAACTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: VLTLHLKLHCDNTRLYRMERLSF*AMNFFR
Trigger: TCTGAAGAAGTTCATCGCCAAAAAACTCAACCTTTC...CATTCTGTACAACCGTGTGTTATCACAGTGCAGTTTTAAGTGTAACGTTAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362003.9
CDS GCA 72 bp GCATGGAGGCTTCAGGCCAGCACTCCCACGCGACGCTaGCTCCTGGCTCCGCACGCGGACTCGCTTCTGCAC +
Preference number: 6 (lower is better)
Translates to: AWRLQASTPTRR*LLAPHADSLLH
Trigger: GTGCAGAAGCGAGTCCGCGTGCGGAGCCAGGAGGCAGCGTCGCGTGGGAGTGCTGGCCTGAAGCCTCCATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000362003.9
ENST00000400151.6
ENST00000419774.5
ENST00000427463.5
ENST00000430644.5
ENST00000433814.5
ENST00000440452.5
ENST00000470161.6
ENST00000475288.5
ENST00000482726.5
ENST00000484141.5
CDS GCA 72 bp CCTCCCTGGGTGGCGCGGGCAGGGCACGTACAGGTGTaGAGACACTCGGTCACCGTGGTGGCGTCGATGAGG +
Preference number: 6 (lower is better)
Translates to: PPWVARAGHVQV*RHSVTVVASMR
Trigger: CCTCATCGACGCCACCACGGTGACCGAGTGTCTGCACACCTGTACGTGCCCTGCCCGCGCCACCCAGGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400151.6
CDS GCA 72 bp AAAGCCCGTCCGGAGTTTAAAACAAAGAGGCGGAAATaGCCGAGCCGAGCCGAGCGCCGCGTCGGGGGCGCC +
Preference number: 6 (lower is better)
Translates to: KARPEFKTKRRK*PSRAERRVGGA
Trigger: GGCGCCCCCGACGCGGCGCTCGGCTCGGCTCGGGCATTTCCGCCTCTTTGTTTTAAACTCCGGACGGGCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000362003.9
ENST00000400151.6
ENST00000419774.5
ENST00000427463.5
ENST00000470161.6
ENST00000475288.5
ENST00000482726.5
CDS GCA 72 bp ACAGAAACGGCACCTGAGCACGACGCCTGGGGTCCCTaGTACATTGTGACGCCTGCGGTCTCGGGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: TETAPEHDAWGP*YIVTPAVSGLR
Trigger: CCGCAGCCCCGAGACCGCAGGCGTCACAATGTAGCAGGGACCCCAGGCGTCGTGCTCAGGTGCCGTTTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427463.5
ENST00000470161.6
CDS TCA 72 bp TCCTCCTCCCTGCGGGGCTGTGAGGTTCGGGAGACCTaGTGCATACTGAGGACACGGGAGCCTCCGCTAGAC +
Preference number: 6 (lower is better)
Translates to: SSSLRGCEVRET*CILRTREPPLD
Trigger: GTCTAGCGGAGGCTCCCGTGTCCTCAGTATGCATCAGGTCTCCCGAACCTCACAGCCCCGCAGGGAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440452.5
CDS GCA 72 bp GCCAGCAGTGAGCACTGTCACAGCGGCTACTGGCCTTaGTGCTCCGTGGGAGGAATGTGGGGTCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: ASSEHCHSGYWP*CSVGGMWGLSC
Trigger: ACAGGAGAGACCCCACATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCTGTGACAGTGCTCACTGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS CCA 72 bp GCACGCGGACTCGCTTCTGCACCCTCCTTCCGGCCCTaGCTCTTTTTCCATTTTCTGAGCACGACGCCTGGG +
Preference number: 6 (lower is better)
Translates to: ARGLASAPSFRP*LFFHFLSTTPG
Trigger: CCCAGGCGTCGTGCTCAGAAAATGGAAAAAGAGCCAGGGCCGGAAGGAGGGTGCAGAAGCGAGTCCGCGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000362003.9
ENST00000400151.6
ENST00000419774.5
ENST00000430644.5
ENST00000433814.5
ENST00000440452.5
ENST00000475288.5
ENST00000482726.5
ENST00000484141.5
CDS GCA 72 bp AGCAGTGAGCACTGTCACAGCGGCTACTGGCCTTGCTaGTCCGTGGGAGGAATGTGGGGTCTCTCCTGTGTT +
Preference number: 6 (lower is better)
Translates to: SSEHCHSGYWPC*SVGGMWGLSCV
Trigger: AACACAGGAGAGACCCCACATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCTGTGACAGTGCTCACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS CCA 72 bp AGCACTGTCACAGCGGCTACTGGCCTTGCTGCTCCGTaGGAGGAATGTGGGGTCTCTCCTGTGTTTCGCTCT +
Preference number: 6 (lower is better)
Translates to: STVTAATGLAAP*EECGVSPVFRS
Trigger: AGAGCGAAACACAGGAGAGACCCCACATTCCTCCCACGGAGCAGCAAGGCCAGTAGCCGCTGTGACAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS TCA 72 bp TCACAGGAGGGGCCAGGAAAACTCGGCAGTGAACCGTaGACACTGCATCGTGTCCTGACCAGCTGGCTCCTA +
Preference number: 6 (lower is better)
Translates to: SQEGPGKLGSEP*TLHRVLTSWLL
Trigger: TAGGAGCCAGCTGGTCAGGACACGATGCAGTGTTCACGGTTCACTGCCGAGTTTTCCTGGCCCCTCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475288.5
CDS TCA 72 bp TGGACTCTCACAGGAGGGGCCAGGAAAACTCGGCAGTaGACCGTGAACACTGCATCGTGTCCTGACCAGCTG +
Preference number: 6 (lower is better)
Translates to: WTLTGGARKTRQ*TVNTASCPDQL
Trigger: CAGCTGGTCAGGACACGATGCAGTGTTCACGGTTCACTGCCGAGTTTTCCTGGCCCCTCCTGTGAGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475288.5
CDS TCA 72 bp AAGGAACTCCTCTGGAGATTTGGAAACTGCCAGCAGTaGGCACTGTCACAGCGGCTACTGGCCTTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: KELLWRFGNCQQ*ALSQRLLALLL
Trigger: GAGCAGCAAGGCCAGTAGCCGCTGTGACAGTGCTCACTGCTGGCAGTTTCCAAATCTCCAGAGGAGTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5
CDS CCA 72 bp CTGACTTATCTTCAAGATCGTCTCTGCCCCTGGTCCTaGTTCCTGCTTTTGTCGGGCTTGAGAGGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: LTYLQDRLCPWS*FLLLSGLRGVQ
Trigger: CTGCACACCTCTCAAGCCCGACAAAAGCAGGAACCAGGACCAGGGGCAGAGACGATCTTGAAGATAAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430644.5
ENST00000440452.5
CDS CAA 72 bp ACATCAGGTGTGAAGAACACACTGGAAGGTTCCCCTTaGAAGGATCTAAGGAACTCCTCTGGAGATTTGGAA +
Preference number: 6 (lower is better)
Translates to: TSGVKNTLEGSP*KDLRNSSGDLE
Trigger: TTCCAAATCTCCAGAGGAGTTCCTTAGATCCTTCAAAGGGGAACCTTCCAGTGTGTTCTTCACACCTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400151.6
ENST00000430644.5
ENST00000440452.5