Pregenerated sensors for PCGF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000115289Ensembl transcript IDs: ENST00000233630.11, ENST00000465993.5, ENST00000475863.5, ENST00000480844.2, ENST00000496911.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCCGCCCAGCAGAGGGCTCCGCGCACAGCGGGGGCTTCCCTCACGTaGACTCGCCTGACCCTCCTTTCCCAGGGGAGACTACACAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAQQRAPRTAGASLT*TRLTLLSQGRLHNV Trigger: GACGTTGTGTAGTCTCCCCTGGGAAAGGAGGGTCAGGCGAGTCCACGTGAGGGAAGCCCCCGCTGTGCGCGGAGCCCTCTGCTGGGCGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000475863.5 ENST00000496911.1 |
||
| CDS TCA 90 bp | AGAGGGCTCCGCGCACAGCGGGGGCTTCCCTCACGTGGACTCGCCTaGCCCTCCTTTCCCAGGGGAGACTACACAACGTCGGCGACACAA | + |
|
Preference number: 5 (lower is better) Translates to: RGLRAQRGLPSRGLA*PSFPRGDYTTSATQ Trigger: TTGTGTCGCCGACGTTGTGTAGTCTCCCCTGGGAAAGGAGGGTCAGGCGAGTCCACGTGAGGGAAGCCCCCGCTGTGCGCGGAGCCCTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475863.5 |
||
| CDS GCA 90 bp | GCCAGAATGTCTTGCAAGCCAGGCACCAGCTTATACACGATGTCCTaGATGACCCGGTCCAGTTTGAGGTTGAGCAGTGGCTGTGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARMSCKPGTSLYTMS*MTRSSLRLSSGCVS Trigger: CGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACATCGTGTATAAGCTGGTGCCTGGCTTGCAAGACATTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465993.5 |
||
| CDS GCA 90 bp | GACTCACTGTCTTGCAAGCCAGGCACCAGCTTATACACGATGTCCTaGATGACCCGGTCCAGTTTGAGGTTGAGCAGTGGCTGTGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DSLSCKPGTSLYTMS*MTRSSLRLSSGCVS Trigger: CGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACATCGTGTATAAGCTGGTGCCTGGCTTGCAAGACAGTGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496911.1 |
||
| CDS GCA 90 bp | TCTTCACTGTCTTGCAAGCCAGGCACCAGCTTATACACGATGTCCTaGATGACCCGGTCCAGTTTGAGGTTGAGCAGTGGCTGTGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSLSCKPGTSLYTMS*MTRSSLRLSSGCVS Trigger: CGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACATCGTGTATAAGCTGGTGCCTGGCTTGCAAGACAGTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233630.11 ENST00000475863.5 ENST00000480844.2 |
||
| CDS GCA 90 bp | TGGCCTTCTGCCTACGTGAGTCCTACCAAACCCGTCACCTCAAGCTaGCACTCAGCAATTAGTCCTCAAGAGGCCCCTCAAAGTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WPSAYVSPTKPVTSS*HSAISPQEAPQSQV Trigger: AACCTGACTTTGAGGGGCCTCTTGAGGACTAATTGCTGAGTGGCAGCTTGAGGTGACGGGTTTGGTAGGACTCACGTAGGCAGAAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496911.1 |
||
| CDS TCA 90 bp | AGTAGCCGGCGCATAGGCAGCAAACAATGTGTTCATTCAAGTCTTTaGTCTTCACTCGAACCTCCTCCTGACCCTCCTTTCCCAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSRRIGSKQCVHSSL*SSLEPPPDPPFPGE Trigger: CTCCCCTGGGAAAGGAGGGTCAGGAGGAGGTTCGAGTGAAGATCAAAGACTTGAATGAACACATTGTTTGCTGCCTATGCGCCGGCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480844.2 |
||
| CDS GCA 90 bp | ATTAGCCCTTCCTCACTTTTTGTCCTTCCCTCATCTTTGGCCTTCTaGCTACGTGAGTCCTACCAAACCCGTCACCTCAAGCTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ISPSSLFVLPSSLAF*LRESYQTRHLKLPL Trigger: GAGTGGCAGCTTGAGGTGACGGGTTTGGTAGGACTCACGTAGGCAGAAGGCCAAAGATGAGGGAAGGACAAAAAGTGAGGAAGGGCTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496911.1 |
||
| CDS CCA 90 bp | TGCATGACCCGGTCCAGTTTGAGGTTGAGCAGTGGCTGTGTCTCGTaGATCTTAATGTTGCACATGGGGCAGTACTTGCTAGTTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CMTRSSLRLSSGCVS*ILMLHMGQYLLVWR Trigger: CCTCCAAACTAGCAAGTACTGCCCCATGTGCAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS TCA 90 bp | AGTAGCCGGCGCATAGGCAGCAAACAATGTGTTCATTCAAGTCTTTaGTCTTCACTCGAACCTCCTCCTCGTTCCGTAGCGGGTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRRIGSKQCVHSSL*SSLEPPPRSVAGPS Trigger: AGATGGACCCGCTACGGAACGAGGAGGAGGTTCGAGTGAAGATCAAAGACTTGAATGAACACATTGTTTGCTGCCTATGCGCCGGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233630.11 |
||
| CDS CCA 90 bp | ATACACGATGTCCTGCATGACCCGGTCCAGTTTGAGGTTGAGCAGTaGCTGTGTCTCGTGGATCTTAATGTTGCACATGGGGCAGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: IHDVLHDPVQFEVEQ*LCLVDLNVAHGAVL Trigger: AAGTACTGCCCCATGTGCAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACATCGTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS TCA 90 bp | AGTAGCCGGCGCATAGGCAGCAAACAATGTGTTCATTCAAGTCTTTaGTCTTCACTCGAACCTCCTCCTGAAGATACACCCTCCGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSRRIGSKQCVHSSL*SSLEPPPEDTPSVT Trigger: GGTGACGGAGGGTGTATCTTCAGGAGGAGGTTCGAGTGAAGATCAAAGACTTGAATGAACACATTGTTTGCTGCCTATGCGCCGGCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000475863.5 ENST00000496911.1 |
||
| CDS TCA 90 bp | TTCCTCACTTTTTGTCCTTCCCTCATCTTTGGCCTTCTGCCTACGTaGGTCCTACCAAACCCGTCACCTCAAGCTGCCACTCAGCAATTA | + |
|
Preference number: 5 (lower is better) Translates to: FLTFCPSLIFGLLPT*VLPNPSPQAATQQL Trigger: TAATTGCTGAGTGGCAGCTTGAGGTGACGGGTTTGGTAGGACTCACGTAGGCAGAAGGCCAAAGATGAGGGAAGGACAAAAAGTGAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496911.1 |
||
| CDS CCA 72 bp | CAGAGGGCTCCGCGCACAGCGGGGGCTTCCCTCACGTaGACTCGCCTGACCCTCCTTTCCCAGGGGAGACTA | + |
|
Preference number: 6 (lower is better) Translates to: QRAPRTAGASLT*TRLTLLSQGRL Trigger: TAGTCTCCCCTGGGAAAGGAGGGTCAGGCGAGTCCACGTGAGGGAAGCCCCCGCTGTGCGCGGAGCCCTCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000475863.5 ENST00000496911.1 |
||
| CDS TCA 72 bp | CGCGCACAGCGGGGGCTTCCCTCACGTGGACTCGCCTaGCCCTCCTTTCCCAGGGGAGACTACACAACGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RAQRGLPSRGLA*PSFPRGDYTTS Trigger: CGACGTTGTGTAGTCTCCCCTGGGAAAGGAGGGTCAGGCGAGTCCACGTGAGGGAAGCCCCCGCTGTGCGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000475863.5 ENST00000496911.1 |
||
| CDS CAA 72 bp | TCCACCCTCAAACCCCAACCCGTGCGCCTTCCCACCTaGGGGGTCGCCTCCTTCATCACACTAGACGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: STLKPQPVRLPT*GVASFITLDGQ Trigger: TTGGCCGTCTAGTGTGATGAAGGAGGCGACCCCCAAGGTGGGAAGGCGCACGGGTTGGGGTTTGAGGGTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000475863.5 ENST00000496911.1 |
||
| CDS CCA 72 bp | TTCCGTAGCGGGTCCATCTTGTACACTGACTGGAGCTaGTTCCGAAGCCTCATCGCGATCGCAATCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FRSGSILYTDWS*FRSLIAIAIWP Trigger: GGGCCAGATTGCGATCGCGATGAGGCTTCGGAACCAGCTCCAGTCAGTGTACAAGATGGACCCGCTACGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233630.11 |
||
| CDS CCA 72 bp | TCCTCGTTCCGTAGCGGGTCCATCTTGTACACTGACTaGAGCTGGTTCCGAAGCCTCATCGCGATCGCAATC | + |
|
Preference number: 6 (lower is better) Translates to: SSFRSGSILYTD*SWFRSLIAIAI Trigger: GATTGCGATCGCGATGAGGCTTCGGAACCAGCTCCAGTCAGTGTACAAGATGGACCCGCTACGGAACGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233630.11 |
||
| CDS CAA 72 bp | ACTCGAACCTCCTCCTCGTTCCGTAGCGGGTCCATCTaGTACACTGACTGGAGCTGGTTCCGAAGCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: TRTSSSFRSGSI*YTDWSWFRSLI Trigger: GATGAGGCTTCGGAACCAGCTCCAGTCAGTGTACAAGATGGACCCGCTACGGAACGAGGAGGAGGTTCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233630.11 |
||
| CDS GCA 72 bp | TCTTGCAAGCCAGGCACCAGCTTATACACGATGTCCTaGATGACCCGGTCCAGTTTGAGGTTGAGCAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SCKPGTSLYTMS*MTRSSLRLSSG Trigger: GCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACATCGTGTATAAGCTGGTGCCTGGCTTGCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS CCA 72 bp | GTCCTGCATGACCCGGTCCAGTTTGAGGTTGAGCAGTaGCTGTGTCTCGTGGATCTTAATGTTGCACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLHDPVQFEVEQ*LCLVDLNVAHG Trigger: CCCATGTGCAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS CAA 72 bp | CAGCAATTAGTCCTCAAGAGGCCCCTCAAAGTCAGGTaGGTGACTCACTGTCTTGCAAGCCAGGCACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QQLVLKRPLKVR*VTHCLASQAPA Trigger: AGCTGGTGCCTGGCTTGCAAGACAGTGAGTCACCAACCTGACTTTGAGGGGCCTCTTGAGGACTAATTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496911.1 |
||
| CDS CAA 90 bp | CCAGGCACCAGCTTATACACGATGTCCTGCATGACCCGGTCCAGTTaGAGGTTGAGCAGTGGCTGTGTCTCGTGGATCTTAATGTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGTSLYTMSCMTRSS*RLSSGCVSWILMLH Trigger: GTGCAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACATCGTGTATAAGCTGGTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS CAA 90 bp | GCTGCCACTCAGCAATTAGTCCTCAAGAGGCCCCTCAAAGTCAGGTaGGTGACTCACTGTCTTGCAAGCCAGGCACCAGCTTATACACGA | + |
|
Preference number: 6 (lower is better) Translates to: AATQQLVLKRPLKVR*VTHCLASQAPAYTR Trigger: TCGTGTATAAGCTGGTGCCTGGCTTGCAAGACAGTGAGTCACCAACCTGACTTTGAGGGGCCTCTTGAGGACTAATTGCTGAGTGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496911.1 |
||
| CDS TCA 72 bp | TTTTGTCCTTCCCTCATCTTTGGCCTTCTGCCTACGTaGGTCCTACCAAACCCGTCACCTCAAGCTGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: FCPSLIFGLLPT*VLPNPSPQAAT Trigger: AGTGGCAGCTTGAGGTGACGGGTTTGGTAGGACTCACGTAGGCAGAAGGCCAAAGATGAGGGAAGGACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496911.1 |
||
| CDS CAA 90 bp | ACCAGCTTATACACGATGTCCTGCATGACCCGGTCCAGTTTGAGGTaGAGCAGTGGCTGTGTCTCGTGGATCTTAATGTTGCACATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSLYTMSCMTRSSLR*SSGCVSWILMLHMG Trigger: CCCCATGTGCAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACATCGTGTATAAGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS GCA 72 bp | TCCTCACTTTTTGTCCTTCCCTCATCTTTGGCCTTCTaGCTACGTGAGTCCTACCAAACCCGTCACCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLFVLPSSLAF*LRESYQTRHLK Trigger: CTTGAGGTGACGGGTTTGGTAGGACTCACGTAGGCAGAAGGCCAAAGATGAGGGAAGGACAAAAAGTGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496911.1 |
||
| CDS CAA 72 bp | TACACGATGTCCTGCATGACCCGGTCCAGTTTGAGGTaGAGCAGTGGCTGTGTCTCGTGGATCTTAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: YTMSCMTRSSLR*SSGCVSWILML Trigger: CAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACATCGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS CAA 72 bp | AGCTTATACACGATGTCCTGCATGACCCGGTCCAGTTaGAGGTTGAGCAGTGGCTGTGTCTCGTGGATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SLYTMSCMTRSS*RLSSGCVSWIL Trigger: TAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACATCGTGTATAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS CAA 90 bp | TCCAGTTTGAGGTTGAGCAGTGGCTGTGTCTCGTGGATCTTAATGTaGCACATGGGGCAGTACTTGCTAGTTTGGAGGTACTTCACAATA | + |
|
Preference number: 6 (lower is better) Translates to: SSLRLSSGCVSWILM*HMGQYLLVWRYFTI Trigger: TATTGTGAAGTACCTCCAAACTAGCAAGTACTGCCCCATGTGCAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS CAA 90 bp | AGTGGCTGTGTCTCGTGGATCTTAATGTTGCACATGGGGCAGTACTaGCTAGTTTGGAGGTACTTCACAATACAACTCTTGCAGAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SGCVSWILMLHMGQY*LVWRYFTIQLLQKV Trigger: TACTTTCTGCAAGAGTTGTATTGTGAAGTACCTCCAAACTAGCAAGTACTGCCCCATGTGCAACATTAAGATCCACGAGACACAGCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS CAA 72 bp | GTCTCGTGGATCTTAATGTTGCACATGGGGCAGTACTaGCTAGTTTGGAGGTACTTCACAATACAACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSWILMLHMGQY*LVWRYFTIQLL Trigger: CAAGAGTTGTATTGTGAAGTACCTCCAAACTAGCAAGTACTGCCCCATGTGCAACATTAAGATCCACGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||
| CDS CAA 90 bp | TGTCTCGTGGATCTTAATGTTGCACATGGGGCAGTACTTGCTAGTTaGGAGGTACTTCACAATACAACTCTTGCAGAAAGTATGAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: CLVDLNVAHGAVLAS*EVLHNTTLAESMKT Trigger: TGTCTTCATACTTTCTGCAAGAGTTGTATTGTGAAGTACCTCCAAACTAGCAAGTACTGCCCCATGTGCAACATTAAGATCCACGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000233630.11 ENST00000465993.5 ENST00000475863.5 ENST00000480844.2 ENST00000496911.1 |
||