Pregenerated sensors for PCGEM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000227418

Ensembl transcript IDs: ENST00000454040.5, ENST00000606314.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	AAGACAGTGCACTCTGAAATGCCTCATGATCTCTTTTCCCTCTGCTaGCCTGTTGCCACTTTTTGCTGCCCTAGGAGTAGGCCTGTGTCT	+
Preference number: 6 (lower is better) Translates to: KTVHSEMPHDLFSLC*PVATFCCPRSRPVS Trigger: AGACACAGGCCTACTCCTAGGGCAGCAAAAAGTGGCAACAGGCAAGCAGAGGGAAAAGAGATCATGAGGCATTTCAGAGTGCACTGTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000454040.5 ENST00000606314.1
CDS TCA 72 bp	CAGGGCAAGACTCCATCTCACTTGATAAGGTCACGTTaGGTCCCAGTGCATCTCGTAGTACAATTTTATCAT	+
Preference number: 6 (lower is better) Translates to: QGKTPSHLIRSR*VPVHLVVQFYH Trigger: ATGATAAAATTGTACTACGAGATGCACTGGGACTCAACGTGACCTTATCAAGTGAGATGGAGTCTTGCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606314.1
CDS TCA 72 bp	CAGGAGCTGTTTTTAGTTCCACTTTGGCTGATATCATaGAGTGTCAAATGCACCAAGCCTGCTGTAATCCCA	+
Preference number: 6 (lower is better) Translates to: QELFLVPLWLIS*SVKCTKPAVIP Trigger: TGGGATTACAGCAGGCTTGGTGCATTTGACACTTCATGATATCAGCCAAAGTGGAACTAAAAACAGCTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606314.1
CDS CAA 72 bp	CAAATGCACCAAGCCTGCTCACTTGATAAGGTCACGTaGAGTCCCAGTGCATCTCGTAGTACAATTTTATCA	+
Preference number: 6 (lower is better) Translates to: QMHQACSLDKVT*SPSASRSTILS Trigger: TGATAAAATTGTACTACGAGATGCACTGGGACTCAACGTGACCTTATCAAGTGAGCAGGCTTGGTGCATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454040.5
CDS CAA 72 bp	CATAGTCCTCTTCCAGGAGCTGTTTTTAGTTCCACTTaGGCTGATATCATGAAGTGTCAAATGCACCAAGCC	+
Preference number: 6 (lower is better) Translates to: HSPLPGAVFSST*ADIMKCQMHQA Trigger: GGCTTGGTGCATTTGACACTTCATGATATCAGCCAAAGTGGAACTAAAAACAGCTCCTGGAAGAGGACTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000454040.5 ENST00000606314.1
CDS CAA 72 bp	ACAGGGCAAGACTCCATCTCACTTGATAAGGTCACGTaGAGTCCCAGTGCATCTCGTAGTACAATTTTATCA	+
Preference number: 6 (lower is better) Translates to: TGQDSISLDKVT*SPSASRSTILS Trigger: TGATAAAATTGTACTACGAGATGCACTGGGACTCAACGTGACCTTATCAAGTGAGATGGAGTCTTGCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606314.1
CDS TCA 72 bp	AAATGCACCAAGCCTGCTCACTTGATAAGGTCACGTTaGGTCCCAGTGCATCTCGTAGTACAATTTTATCAT	+
Preference number: 6 (lower is better) Translates to: KCTKPAHLIRSR*VPVHLVVQFYH Trigger: ATGATAAAATTGTACTACGAGATGCACTGGGACTCAACGTGACCTTATCAAGTGAGCAGGCTTGGTGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454040.5

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