Pregenerated sensors for PCDHGC5 (Homo sapiens)
Ensembl gene IDs: ENSG00000240764Ensembl transcript IDs: ENST00000252087.3, ENST00000610789.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CGACCAAGCCGGCCGGAGAGGAGTGGATGCAAGTTCAATCCCTTATaGGGACGGGCGGCTTCTCCAGTGCCGCCCCCAGGGGTCGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSRPERSGCKFNPL*GRAASPVPPPGVAR Trigger: CCGGGCGACCCCTGGGGGCGGCACTGGAGAAGCCGCCCGTCCTCATAAGGGATTGAACTTGCATCCACTCCTCTCCGGCCGGCTTGGTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS TCA 90 bp | GTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTCTCTGGGCCTaGGAGAAACGCCAGTCCGTGTTGGGCGGGGCTTGCTGGCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VSSPFWEPLVPGLWA*EKRQSVLGGACWLR Trigger: GCGGAGCCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000252087.3 |
||
| CDS TCA 90 bp | AGTGGCTCTGCGAGTCTGTGGGCCGCAGCGTCACCTCCATGTACTTaGGCGTGCCGTCCGAGCTCACCTGCAGGTTGGGGCTGGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGSASLWAAASPPCT*ACRPSSPAGWGWTA Trigger: AGCAGTCCAGCCCCAACCTGCAGGTGAGCTCGGACGGCACGCTCAAGTACATGGAGGTGACGCTGCGGCCCACAGACTCGCAGAGCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 90 bp | CGGGACCGGATGGCGTCAGGCTCCAGCGCCAGAGCTGTGGGCTGCTaGACGCTGAGGGGTCTTAGAAAAGTGAAGTCACTGCCGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RDRMASGSSARAVGC*TLRGLRKVKSLPSE Trigger: CTCGGACGGCAGTGACTTCACTTTTCTAAGACCCCTCAGCGTTCAGCAGCCCACAGCTCTGGCGCTGGAGCCTGACGCCATCCGGTCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 90 bp | CCCCATCCCTTAATCGGCCACTCTGGTTTCGCGCAAACGGTCCAATaGTCCCGAGAATCGGGTGGAGCGCAGCCAGCGACCAAGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHPLIGHSGFAQTVQ*SRESGGAQPATKPA Trigger: GGCCGGCTTGGTCGCTGGCTGCGCTCCACCCGATTCTCGGGATCATTGGACCGTTTGCGCGAAACCAGAGTGGCCGATTAAGGGATGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS CCA 90 bp | CCACTCTGGTTTCGCGCAAACGGTCCAATGATCCCGAGAATCGGGTaGAGCGCAGCCAGCGACCAAGCCGGCCGGAGAGGAGTGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLWFRANGPMIPRIG*SAASDQAGRRGVDA Trigger: TGCATCCACTCCTCTCCGGCCGGCTTGGTCGCTGGCTGCGCTCCACCCGATTCTCGGGATCATTGGACCGTTTGCGCGAAACCAGAGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS CCA 90 bp | CCACCACCCCCGGTGCTCGGAGCCCCATCCCTTAATCGGCCACTCTaGTTTCGCGCAAACGGTCCAATGATCCCGAGAATCGGGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPPPVLGAPSLNRPL*FRANGPMIPRIGWS Trigger: GCTCCACCCGATTCTCGGGATCATTGGACCGTTTGCGCGAAACCAGAGTGGCCGATTAAGGGATGGGGCTCCGAGCACCGGGGGTGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS GCA 90 bp | GAGGAGAGTGAAGGGTCACCATTGTCCCTCACCAGGACCACCACCTaGTGGGTGTCAGAGTCATCCTCCAGTAAGGCCCGGGCTGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EESEGSPLSLTRTTT*WVSESSSSKARAVR Trigger: GCGCACAGCCCGGGCCTTACTGGAGGATGACTCTGACACCCAGCAGGTGGTGGTCCTGGTGAGGGACAATGGTGACCCTTCACTCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | GAATCGGGTGGAGCGCAGCCAGCGACCAAGCCGGCCGGAGAGGAGTaGATGCAAGTTCAATCCCTTATGAGGACGGGCGGCTTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ESGGAQPATKPAGEE*MQVQSLMRTGGFSS Trigger: ACTGGAGAAGCCGCCCGTCCTCATAAGGGATTGAACTTGCATCCACTCCTCTCCGGCCGGCTTGGTCGCTGGCTGCGCTCCACCCGATTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS GCA 90 bp | CCAGACACCCAGCCCCAGCAGCACAAGGACAACATGCACAGCACTTaGCATTTCCCAGCGAGCTGTGGGAGTGTCTTGGGCCCCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: PDTQPQQHKDNMHST*HFPASCGSVLGPMT Trigger: GGTCATGGGGCCCAAGACACTCCCACAGCTCGCTGGGAAATGGCAAGTGCTGTGCATGTTGTCCTTGTGCTGCTGGGGCTGGGTGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 90 bp | TGCAGCCGCCGGCTCAACAGATCTGTCATCTTTAAGCCCAGATCCTaGGCAACATTCCCCACCAGCGTCCCCGGCTCAGACTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: CSRRLNRSVIFKPRS*ATFPTSVPGSDSST Trigger: GGTGGAGGAGTCTGAGCCGGGGACGCTGGTGGGGAATGTTGCTCAGGATCTGGGCTTAAAGATGACAGATCTGTTGAGCCGGCGGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS GCA 90 bp | AACGAAGCTGCCCAGACACCCAGCCCCAGCAGCACAAGGACAACATaGACAGCACTTGCCATTTCCCAGCGAGCTGTGGGAGTGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NEAAQTPSPSSTRTT*TALAISQRAVGVSW Trigger: CCAAGACACTCCCACAGCTCGCTGGGAAATGGCAAGTGCTGTGCATGTTGTCCTTGTGCTGCTGGGGCTGGGTGTCTGGGCAGCTTCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 90 bp | TACAATGGAGTAGGTGAGGCGGGCATTATCCCCAGTGTCTGGATCTaGGGCAGCCACAGTGCAAAGAAGGGAGCCCGGAGGCCGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YNGVGEAGIIPSVWI*GSHSAKKGARRPVF Trigger: GAAAACCGGCCTCCGGGCTCCCTTCTTTGCACTGTGGCTGCCTCAGATCCAGACACTGGGGATAATGCCCGCCTCACCTACTCCATTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | GAGCTGTGGGAGTGTCTTGGGCCCCATGACCCAGAAGTCCCTTTGTaGAGAGTAAGTCTGTGCTGTCCTGTCTCCAAGGTAGACCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELWECLGPHDPEVPL*RVSLCCPVSKVDPG Trigger: CCCTGGGTCTACCTTGGAGACAGGACAGCACAGACTTACTCTCCACAAAGGGACTTCTGGGTCATGGGGCCCAAGACACTCCCACAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | TGGGCATTTCCTCAGGGTCCTCATCCTCCAGAACCAGCAGCACTGTaGCTGTGGAGGAGAGTGAAGGGTCACCATTGTCCCTCACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WAFPQGPHPPEPAAL*LWRRVKGHHCPSPG Trigger: TCCTGGTGAGGGACAATGGTGACCCTTCACTCTCCTCCACAGCCACAGTGCTGCTGGTTCTGGAGGATGAGGACCCTGAGGAAATGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 90 bp | GTTTGTGTAGGGAAGGTGAACCAGCATCGCTGGCCAGCAGCTCGATaGTATAGTGGGATGTGGCCTCCCGGTCCAAAGGCTGGCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VCVGKVNQHRWPAAR*YSGMWPPGPKAGWL Trigger: TAACCAGCCAGCCTTTGGACCGGGAGGCCACATCCCACTATATCATCGAGCTGCTGGCCAGCGATGCTGGTTCACCTTCCCTACACAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS GCA 90 bp | CCAGGGGGTGTTCAGTCACCACCTGCACTGGCAGCAGGCAGCTGGTaGTGGCTCCACATAGGCTTTCTCGGTCAATCTTTTGATTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PGGVQSPPALAAGSW*WLHIGFLGQSFDSL Trigger: CAGTGAATCAAAAGATTGACCGAGAAAGCCTATGTGGAGCCAGCACCAGCTGCCTGCTGCCAGTGCAGGTGGTGACTGAACACCCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | GCACAAGGACAACATGCACAGCACTTGCCATTTCCCAGCGAGCTGTaGGAGTGTCTTGGGCCCCATGACCCAGAAGTCCCTTTGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AQGQHAQHLPFPSEL*ECLGPHDPEVPLWR Trigger: TCTCCACAAAGGGACTTCTGGGTCATGGGGCCCAAGACACTCCCACAGCTCGCTGGGAAATGGCAAGTGCTGTGCATGTTGTCCTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | GGGGGTGTTCAGTCACCACCTGCACTGGCAGCAGGCAGCTGGTGCTaGCTCCACATAGGCTTTCTCGGTCAATCTTTTGATTCACTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGVQSPPALAAGSWC*LHIGFLGQSFDSLP Trigger: TGGCAGTGAATCAAAAGATTGACCGAGAAAGCCTATGTGGAGCCAGCACCAGCTGCCTGCTGCCAGTGCAGGTGGTGACTGAACACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | GCTCCAGGGGGTGTTCAGTCACCACCTGCACTGGCAGCAGGCAGCTaGTGCTGGCTCCACATAGGCTTTCTCGGTCAATCTTTTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: APGGVQSPPALAAGS*CWLHIGFLGQSFDS Trigger: TGAATCAAAAGATTGACCGAGAAAGCCTATGTGGAGCCAGCACCAGCTGCCTGCTGCCAGTGCAGGTGGTGACTGAACACCCCCTGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS GCA 90 bp | AGAAGTGGCTGTTGGGGCTTAGAGTGTAAAAGCTCACAGTATTGGTaGCCACATCCGGATCCTGGGCACTGTCCAGTGGGAATCGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSGCWGLECKSSQYW*PHPDPGHCPVGIVP Trigger: GGGCACGATTCCCACTGGACAGTGCCCAGGATCCGGATGTGGGCACCAATACTGTGAGCTTTTACACTCTAAGCCCCAACAGCCACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | GAGAGAAGTGGCTGTTGGGGCTTAGAGTGTAAAAGCTCACAGTATTaGTGCCCACATCCGGATCCTGGGCACTGTCCAGTGGGAATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERSGCWGLECKSSQY*CPHPDPGHCPVGIV Trigger: CACGATTCCCACTGGACAGTGCCCAGGATCCGGATGTGGGCACCAATACTGTGAGCTTTTACACTCTAAGCCCCAACAGCCACTTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 90 bp | TGGCAGGTCCGGAGAGATATCAAGGCTCACTTCACCATTTCTACCTaGGTCCCGGTCTCGCACATTAAACAACCCCACTACTGTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WQVRRDIKAHFTIST*VPVSHIKQPHYCAH Trigger: GTGGGCACAGTAGTGGGGTTGTTTAATGTGCGAGACCGGGACTCAGGTAGAAATGGTGAAGTGAGCCTTGATATCTCTCCGGACCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS GCA 90 bp | TGCAGCACAGCTGGGGCATTATCATTCTCGTCTAGGACAAACACATaGAGAGATGTGTTGGCATGCAATGGGGGAGAGCCGGAGTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: CSTAGALSFSSRTNT*RDVLACNGGEPESR Trigger: TCGAGACTCCGGCTCTCCCCCATTGCATGCCAACACATCTCTGCATGTGTTTGTCCTAGACGAGAATGATAATGCCCCAGCTGTGCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | AAAGATCCGTCCATCCTCTGGGTTGACATACACAAAGGAGGAGGCTaGGGCTCCCTGAACCTGATTTCCTACAATGGAGTAGGTGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KDPSILWVDIHKGGG*GSLNLISYNGVGEA Trigger: CGCCTCACCTACTCCATTGTAGGAAATCAGGTTCAGGGAGCCCCAGCCTCCTCCTTTGTGTATGTCAACCCAGAGGATGGACGGATCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | CAATTCATAGTCAAAGGTACGCTGGGCAAAGATCCGTCCATCCTCTaGGTTGACATACACAAAGGAGGAGGCTGGGGCTCCCTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QFIVKGTLGKDPSIL*VDIHKGGGWGSLNL Trigger: CAGGTTCAGGGAGCCCCAGCCTCCTCCTTTGTGTATGTCAACCCAGAGGATGGACGGATCTTTGCCCAGCGTACCTTTGACTATGAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | GGGCATTATCATTCTCGTCTAGGACAAACACATGCAGAGATGTGTTaGCATGCAATGGGGGAGAGCCGGAGTCTCGAACCCCCACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: GHYHSRLGQTHAEMC*HAMGESRSLEPPPQ Trigger: TTGTGGTGGGGGTTCGAGACTCCGGCTCTCCCCCATTGCATGCCAACACATCTCTGCATGTGTTTGTCCTAGACGAGAATGATAATGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS GCA 90 bp | TTATCATTCTCGTCTAGGACAAACACATGCAGAGATGTGTTGGCATaGAATGGGGGAGAGCCGGAGTCTCGAACCCCCACCACAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSFSSRTNTCRDVLA*NGGEPESRTPTTIC Trigger: GCAGATTGTGGTGGGGGTTCGAGACTCCGGCTCTCCCCCATTGCATGCCAACACATCTCTGCATGTGTTTGTCCTAGACGAGAATGATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 90 bp | AGGCTGTCCCTGGTCACGGGCTCTTGCATGAATTTCATAGAAACGTaGCTCCTCAAAGTCTATGGGACCCAACACATGGATTGCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RLSLVTGSCMNFIET*LLKVYGTQHMDCPT Trigger: AGTGGGGCAATCCATGTGTTGGGTCCCATAGACTTTGAGGAGTCACGTTTCTATGAAATTCATGCAAGAGCCCGTGACCAGGGACAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 90 bp | GCTTCCCATCTTTTAGGGTCTTCACATTCAGAGAGAAGTGGCTGTTaGGGCTTAGAGTGTAAAAGCTCACAGTATTGGTGCCCACATCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASHLLGSSHSERSGC*GLECKSSQYWCPHP Trigger: CGGATGTGGGCACCAATACTGTGAGCTTTTACACTCTAAGCCCCAACAGCCACTTCTCTCTGAATGTGAAGACCCTAAAAGATGGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | CGGGTCTCTGGGCCTGAGAGAAACGCCAGTCCGTGTTaGGCGGGGCTTGCTGGCTCCGCTCCCGCAGCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: RVSGPERNASPC*AGLAGSAPAAY Trigger: ATACGCTGCGGGAGCGGAGCCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000252087.3 |
||
| CDS TCA 72 bp | GCGAGTCTGTGGGCCGCAGCGTCACCTCCATGTACTTaGGCGTGCCGTCCGAGCTCACCTGCAGGTTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASLWAAASPPCT*ACRPSSPAGWG Trigger: GCCCCAACCTGCAGGTGAGCTCGGACGGCACGCTCAAGTACATGGAGGTGACGCTGCGGCCCACAGACTCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 90 bp | CAGTGGCTCTGCGAGTCTGTGGGCCGCAGCGTCACCTCCATGTACTaGAGCGTGCCGTCCGAGCTCACCTGCAGGTTGGGGCTGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: QWLCESVGRSVTSMY*SVPSELTCRLGLDC Trigger: GCAGTCCAGCCCCAACCTGCAGGTGAGCTCGGACGGCACGCTCAAGTACATGGAGGTGACGCTGCGGCCCACAGACTCGCAGAGCCACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 72 bp | CGGCCGGAGAGGAGTGGATGCAAGTTCAATCCCTTATaGGGACGGGCGGCTTCTCCAGTGCCGCCCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPERSGCKFNPL*GRAASPVPPPG Trigger: CCCTGGGGGCGGCACTGGAGAAGCCGCCCGTCCTCATAAGGGATTGAACTTGCATCCACTCCTCTCCGGCCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS CCA 72 bp | GGAGCGCAGCCAGCGACCAAGCCGGCCGGAGAGGAGTaGATGCAAGTTCAATCCCTTATGAGGACGGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAQPATKPAGEE*MQVQSLMRTGG Trigger: GCCGCCCGTCCTCATAAGGGATTGAACTTGCATCCACTCCTCTCCGGCCGGCTTGGTCGCTGGCTGCGCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS CAA 72 bp | TGCGAGTCTGTGGGCCGCAGCGTCACCTCCATGTACTaGAGCGTGCCGTCCGAGCTCACCTGCAGGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CESVGRSVTSMY*SVPSELTCRLG Trigger: CCCCAACCTGCAGGTGAGCTCGGACGGCACGCTCAAGTACATGGAGGTGACGCTGCGGCCCACAGACTCGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | TTTCGCGCAAACGGTCCAATGATCCCGAGAATCGGGTaGAGCGCAGCCAGCGACCAAGCCGGCCGGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FRANGPMIPRIG*SAASDQAGRRG Trigger: TCCTCTCCGGCCGGCTTGGTCGCTGGCTGCGCTCCACCCGATTCTCGGGATCATTGGACCGTTTGCGCGAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS CAA 90 bp | CCCAGACACCCAGCCCCAGCAGCACAAGGACAACATGCACAGCACTaGCCATTTCCCAGCGAGCTGTGGGAGTGTCTTGGGCCCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRHPAPAAQGQHAQH*PFPSELWECLGPHD Trigger: GTCATGGGGCCCAAGACACTCCCACAGCTCGCTGGGAAATGGCAAGTGCTGTGCATGTTGTCCTTGTGCTGCTGGGGCTGGGTGTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 72 bp | GGGAAGGTGAACCAGCATCGCTGGCCAGCAGCTCGATaGTATAGTGGGATGTGGCCTCCCGGTCCAAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GKVNQHRWPAAR*YSGMWPPGPKA Trigger: AGCCTTTGGACCGGGAGGCCACATCCCACTATATCATCGAGCTGCTGGCCAGCGATGCTGGTTCACCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 72 bp | TTAATCGGCCACTCTGGTTTCGCGCAAACGGTCCAATaGTCCCGAGAATCGGGTGGAGCGCAGCCAGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: LIGHSGFAQTVQ*SRESGGAQPAT Trigger: GGTCGCTGGCTGCGCTCCACCCGATTCTCGGGATCATTGGACCGTTTGCGCGAAACCAGAGTGGCCGATTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS CCA 72 bp | CCCCCACATCCACTTGAATCACACAGTGGCCCTCCATaGCAGGCTGTCCCTGGTCACGGGCTCTTGCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: PPHPLESHSGPP*QAVPGHGLLHE Trigger: TTCATGCAAGAGCCCGTGACCAGGGACAGCCTGCCATGGAGGGCCACTGTGTGATTCAAGTGGATGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | CCTCAGGGTCCTCATCCTCCAGAACCAGCAGCACTGTaGCTGTGGAGGAGAGTGAAGGGTCACCATTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PQGPHPPEPAAL*LWRRVKGHHCP Trigger: GGGACAATGGTGACCCTTCACTCTCCTCCACAGCCACAGTGCTGCTGGTTCTGGAGGATGAGGACCCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | CCGGTGCTCGGAGCCCCATCCCTTAATCGGCCACTCTaGTTTCGCGCAAACGGTCCAATGATCCCGAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: PVLGAPSLNRPL*FRANGPMIPRI Trigger: GATTCTCGGGATCATTGGACCGTTTGCGCGAAACCAGAGTGGCCGATTAAGGGATGGGGCTCCGAGCACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610789.1 |
||
| CDS TCA 72 bp | ATGGCGTCAGGCTCCAGCGCCAGAGCTGTGGGCTGCTaGACGCTGAGGGGTCTTAGAAAAGTGAAGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: MASGSSARAVGC*TLRGLRKVKSL Trigger: CAGTGACTTCACTTTTCTAAGACCCCTCAGCGTTCAGCAGCCCACAGCTCTGGCGCTGGAGCCTGACGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 72 bp | AGCACTTGCCATTTCCCAGCGAGCTGTGGGAGTGTCTaGGGCCCCATGACCCAGAAGTCCCTTTGTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: STCHFPASCGSV*GPMTQKSLCGE Trigger: CTCTCCACAAAGGGACTTCTGGGTCATGGGGCCCAAGACACTCCCACAGCTCGCTGGGAAATGGCAAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 90 bp | AGCGAGCTGTGGGAGTGTCTTGGGCCCCATGACCCAGAAGTCCCTTaGTGGAGAGTAAGTCTGTGCTGTCCTGTCTCCAAGGTAGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: SELWECLGPHDPEVP*WRVSLCCPVSKVDP Trigger: TGGGTCTACCTTGGAGACAGGACAGCACAGACTTACTCTCCACAAAGGGACTTCTGGGTCATGGGGCCCAAGACACTCCCACAGCTCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 72 bp | CGGCTCAACAGATCTGTCATCTTTAAGCCCAGATCCTaGGCAACATTCCCCACCAGCGTCCCCGGCTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLNRSVIFKPRS*ATFPTSVPGSD Trigger: GTCTGAGCCGGGGACGCTGGTGGGGAATGTTGCTCAGGATCTGGGCTTAAAGATGACAGATCTGTTGAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 72 bp | AGGTACGCTGGGCAAAGATCCGTCCATCCTCTGGGTTaGCATACACAAAGGAGGAGGCTGGGGCTCCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RYAGQRSVHPLG*HTQRRRLGLPE Trigger: TTCAGGGAGCCCCAGCCTCCTCCTTTGTGTATGTCAACCCAGAGGATGGACGGATCTTTGCCCAGCGTACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | CTACTGTGCCCACTGGTGTGCTCTCTAGGACAGGGTTaGCCAAAGAGGCCAATAGCACCTCTGGGGCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLCPLVCSLGQG*PKRPIAPLGHC Trigger: ACAATGCCCCAGAGGTGCTATTGGCCTCTTTGGCCAACCCTGTCCTAGAGAGCACACCAGTGGGCACAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | GTCAAAGGTACGCTGGGCAAAGATCCGTCCATCCTCTaGGTTGACATACACAAAGGAGGAGGCTGGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VKGTLGKDPSIL*VDIHKGGGWGS Trigger: GGAGCCCCAGCCTCCTCCTTTGTGTATGTCAACCCAGAGGATGGACGGATCTTTGCCCAGCGTACCTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 72 bp | ACTACTGTGCCCACTGGTGTGCTCTCTAGGACAGGGTaGGCCAAAGAGGCCAATAGCACCTCTGGGGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: TTVPTGVLSRTG*AKEANSTSGAL Trigger: CAATGCCCCAGAGGTGCTATTGGCCTCTTTGGCCAACCCTGTCCTAGAGAGCACACCAGTGGGCACAGTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 72 bp | GGGCTCCCTGAACCTGATTTCCTACAATGGAGTAGGTaGGGCGGGCATTATCCCCAGTGTCTGGATCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPEPDFLQWSR*GGHYPQCLDLR Trigger: CCTCAGATCCAGACACTGGGGATAATGCCCGCCTCACCTACTCCATTGTAGGAAATCAGGTTCAGGGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS GCA 72 bp | GTTCAGTCACCACCTGCACTGGCAGCAGGCAGCTGGTaGTGGCTCCACATAGGCTTTCTCGGTCAATCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VQSPPALAAGSW*WLHIGFLGQSF Trigger: AAAAGATTGACCGAGAAAGCCTATGTGGAGCCAGCACCAGCTGCCTGCTGCCAGTGCAGGTGGTGACTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | GGCTGTTGGGGCTTAGAGTGTAAAAGCTCACAGTATTaGTGCCCACATCCGGATCCTGGGCACTGTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCWGLECKSSQY*CPHPDPGHCPV Trigger: CACTGGACAGTGCCCAGGATCCGGATGTGGGCACCAATACTGTGAGCTTTTACACTCTAAGCCCCAACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 72 bp | TGGGAGTGTCTTGGGCCCCATGACCCAGAAGTCCCTTaGTGGAGAGTAAGTCTGTGCTGTCCTGTCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: WECLGPHDPEVP*WRVSLCCPVSK Trigger: CTTGGAGACAGGACAGCACAGACTTACTCTCCACAAAGGGACTTCTGGGTCATGGGGCCCAAGACACTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 90 bp | ATGCGCATCTCTCGCTCAGGGGTGGCAAAGCTAGGAGAGTTGTCATaGAGATCCAGGATCTCTACCTCTACACGGATTAGCTCCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MRISRSGVAKLGELS*RSRISTSTRISSRG Trigger: CCCCCTGGAGCTAATCCGTGTAGAGGTAGAGATCCTGGATCTCAATGACAACTCTCCTAGCTTTGCCACCCCTGAGCGAGAGATGCGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 90 bp | AACAACCCCACTACTGTGCCCACTGGTGTGCTCTCTAGGACAGGGTaGGCCAAAGAGGCCAATAGCACCTCTGGGGCATTGTCATTGACA | + |
|
Preference number: 6 (lower is better) Translates to: NNPTTVPTGVLSRTG*AKEANSTSGALSLT Trigger: TGTCAATGACAATGCCCCAGAGGTGCTATTGGCCTCTTTGGCCAACCCTGTCCTAGAGAGCACACCAGTGGGCACAGTAGTGGGGTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS GCA 72 bp | TGTTGGGGCTTAGAGTGTAAAAGCTCACAGTATTGGTaGCCACATCCGGATCCTGGGCACTGTCCAGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CWGLECKSSQYW*PHPDPGHCPVG Trigger: TCCCACTGGACAGTGCCCAGGATCCGGATGTGGGCACCAATACTGTGAGCTTTTACACTCTAAGCCCCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | GAGTGTCTTGGGCCCCATGACCCAGAAGTCCCTTTGTaGAGAGTAAGTCTGTGCTGTCCTGTCTCCAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ECLGPHDPEVPL*RVSLCCPVSKV Trigger: TACCTTGGAGACAGGACAGCACAGACTTACTCTCCACAAAGGGACTTCTGGGTCATGGGGCCCAAGACACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 72 bp | GAACGCTCAGGAGGGTGTATGAGGAAGTCACTGGATTaGGGCATTTCCTCAGGGTCCTCATCCTCCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: ERSGGCMRKSLD*GISSGSSSSRT Trigger: GGTTCTGGAGGATGAGGACCCTGAGGAAATGCCCAAATCCAGTGACTTCCTCATACACCCTCCTGAGCGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | AAACGTGACTCCTCAAAGTCTATGGGACCCAACACATaGATTGCCCCACTGCTAGGGTCTAGGCCAAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KRDSSKSMGPNT*IAPLLGSRPKR Trigger: CCTCTTTGGCCTAGACCCTAGCAGTGGGGCAATCCATGTGTTGGGTCCCATAGACTTTGAGGAGTCACGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 72 bp | TCATTCTCGTCTAGGACAAACACATGCAGAGATGTGTaGGCATGCAATGGGGGAGAGCCGGAGTCTCGAACC | + |
|
Preference number: 6 (lower is better) Translates to: SFSSRTNTCRDV*ACNGGEPESRT Trigger: GGTTCGAGACTCCGGCTCTCCCCCATTGCATGCCAACACATCTCTGCATGTGTTTGTCCTAGACGAGAATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 90 bp | TCTGAGATGCGCATCTCTCGCTCAGGGGTGGCAAAGCTAGGAGAGTaGTCATTGAGATCCAGGATCTCTACCTCTACACGGATTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SEMRISRSGVAKLGE*SLRSRISTSTRISS Trigger: GGAGCTAATCCGTGTAGAGGTAGAGATCCTGGATCTCAATGACAACTCTCCTAGCTTTGCCACCCCTGAGCGAGAGATGCGCATCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 90 bp | ATTCCCACACGTAGAACTGAGGATTGGAAGGTTGGAGCATTATCATaGATGTCCAGCACGATGACAGAGATAAGGGTGGTCCCTGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: IPTRRTEDWKVGALS*MSSTMTEIRVVPER Trigger: CCGCTCAGGGACCACCCTTATCTCTGTCATCGTGCTGGACATCAATGATAATGCTCCAACCTTCCAATCCTCAGTTCTACGTGTGGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CAA 90 bp | GCATTGTCATTGACATCTGAAATGTTGAGCCTGATGGTGAGATGTTaGTGTAGGGAAGGTGAACCAGCATCGCTGGCCAGCAGCTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: ALSLTSEMLSLMVRC*CREGEPASLASSSM Trigger: CATCGAGCTGCTGGCCAGCGATGCTGGTTCACCTTCCCTACACAAACATCTCACCATCAGGCTCAACATTTCAGATGTCAATGACAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 72 bp | CGGAGAGATATCAAGGCTCACTTCACCATTTCTACCTaGGTCCCGGTCTCGCACATTAAACAACCCCACTAC | + |
|
Preference number: 6 (lower is better) Translates to: RRDIKAHFTIST*VPVSHIKQPHY Trigger: GTAGTGGGGTTGTTTAATGTGCGAGACCGGGACTCAGGTAGAAATGGTGAAGTGAGCCTTGATATCTCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | CAGCGAGTAGTGGTTCTCAGAAGGCTTAATCTGAAATaGCAGGTCCGGAGAGATATCAAGGCTCACTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: QRVVVLRRLNLK*QVRRDIKAHFT Trigger: GGTGAAGTGAGCCTTGATATCTCTCCGGACCTGCCATTTCAGATTAAGCCTTCTGAGAACCACTACTCGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS TCA 72 bp | CTGGTCACGGGCTCTTGCATGAATTTCATAGAAACGTaGCTCCTCAAAGTCTATGGGACCCAACACATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LVTGSCMNFIET*LLKVYGTQHMD Trigger: ATCCATGTGTTGGGTCCCATAGACTTTGAGGAGTCACGTTTCTATGAAATTCATGCAAGAGCCCGTGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||
| CDS CCA 72 bp | CTTTTAGGGTCTTCACATTCAGAGAGAAGTGGCTGTTaGGGCTTAGAGTGTAAAAGCTCACAGTATTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLGSSHSERSGC*GLECKSSQYWC Trigger: GCACCAATACTGTGAGCTTTTACACTCTAAGCCCCAACAGCCACTTCTCTCTGAATGTGAAGACCCTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000252087.3 ENST00000610789.1 |
||