Pregenerated sensors for PCDHGB6 (Homo sapiens)
Ensembl gene IDs: ENSG00000253305Ensembl transcript IDs: ENST00000520790.1, ENST00000616430.1
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAATCTCTTCTCTTAGGCAGTTTGTATCAGAGGCCAAAGTCCAGTaGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: IISSLRQFVSEAKVQ*FTYLQLCVPINPVA Trigger: TGCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTGGCCTCTGATACAAACTGCCTAAGAGAAGAGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR GCA 90 bp | TCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATaGAAAGGGTATAGAAGTTCACTTCTTTCACACAGAGAACAGGAT | + |
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Preference number: 1 (lower is better) Translates to: STVCAHQPSSNCSLK*KGYRSSLLSHREQD Trigger: ATCCTGTTCTCTGTGTGAAAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCTCGCCCAGGCTGGAGTaGAGTGGCAAGATCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QSPVVHISSTVCAHQPSSSPRLE*SGKIRA Trigger: AGCCCTGATCTTGCCACTGCACTCCAGCCTGGGCGA...GCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR TCA 90 bp | CCACTGCTTCTGTTCGATAGTCAGAACTTGACAAAATATTGTGGCTCACGCCTGGGCAGGAGAATCGCTTaGACCCAGAAGGCGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: PLLLFDSQNLTKYCGSRLGRRIA*TQKAEV Trigger: AACCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGCC...CAGGCGTGAGCCACAATATTTTGTCAAGTTCTGACTATCGAACAGAAGCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR GCA 90 bp | TCACTCTGTCACCTAGACAGCTCACTGCAGCCTAGACTTCCTGGGCTCAAGCGAAGATGCCAAGACCACTaGTTCTGTTCGATAGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SLCHLDSSLQPRLPGLKRRCQDH*FCSIVR Trigger: TCTGACTATCGAACAGAAGCAGTGGTCTTGGCATCT...TCGCTTGAGCCCAGGAAGTCTAGGCTGCAGTGAGCTGTCTAGGTGACAGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR GCA 90 bp | CAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTAAGATCAGGGCTCACTaGAACCTTGACCTCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QPSSNCSLKCKGYRSSLLKIRAH*NLDLPG Trigger: TCCTGGGAGGTCAAGGTTGCAGTGAGCCCTGATCTT...AAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR TCA 90 bp | GCCAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTATCGATAGTCAGAACTTaGCAAAATATTGTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: AKVQWFTYLQLCVPINPVSIVRT*QNIVAH Trigger: GTGAGCCACAATATTTTGTCAAGTTCTGACTATCGA...TACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR GCA 90 bp | CAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTCTCCACCTCCCAAAGTaGTGGGATTACAGCACACTT | + |
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Preference number: 2 (lower is better) Translates to: QPSSNCSLKCKGYRSSLLLHLPK*WDYSTL Trigger: AAGTGTGCTGTAATCCCAGCACTTTGGGAGGTGGAG...AAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATGCAAAATAGGTGTGAGCCACTaGGCCTGTCTTCTGAATATT | + |
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Preference number: 2 (lower is better) Translates to: SSTVCAHQPSSNCSLKCKIGVSH*ACLLNI Trigger: AATATTCAGAAGACAGGCCCAGTGGCTCACACCTAT...TTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR GCA 90 bp | CAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTCTGGTCTCAAATTCCTaGGCTCAAGAGATTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: QPSSNCSLKCKGYRSSLLLVSNS*AQEILH Trigger: GTGGAGAATCTCTTGAGCGCAGGAATTTGAGACCAG...AAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR GCA 90 bp | TCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGTTTGTTTTCTTAGATaGCAAGACCACTGCTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SSTVCAHQPSSNCSLKCKVCFLR*QDHCFC Trigger: ACAGAAGCAGTGGTCTTGGCATCTAAGAAAACAAAC...TTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR GCA 90 bp | CACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAACAGCACACTTGGCCCTaGCTGCATATTTATTTATTT | + |
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Preference number: 2 (lower is better) Translates to: HISSTVCAHQPSSNCSLKQHTWP*LHIYLF Trigger: AAATAAATAAATATGCAGGCAGGGCCAAGTGTGCTG...TTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR CCA 90 bp | CAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTGGATTACAGCACACTTaGCCCTGCCTGCATATTTAT | + |
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Preference number: 2 (lower is better) Translates to: QPSSNCSLKCKGYRSSLLGLQHT*PCLHIY Trigger: ATAAATATGCAGGCAGGGCCAAGTGTGCTGTAATCC...AAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR TCA 90 bp | CACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAAACTGGGCCTGTCTTCTaGATATTTTTAGGCTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: HISSTVCAHQPSSNCSLKTGPVF*IFLGFK Trigger: TTTAAAGCCTAAAAATATTCAGAAGACAGGCCCAGT...TTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR GCA 90 bp | AGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTTCACACTTCAGCCTATCAAAGTaGTGTGATTATAGGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSNCSLKCKGYRSSLLSHFSLSK*CDYRCE Trigger: CTCACACCTATAATCACAGCACTTTGATAGGCTGAA...GTGTGAAAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTAGGCAGTTTGTATCAGAGGCCAAAGTCCAGTGGTTCACATATCTTCAAAATTGTTCCCTCAAATaGAAAGGGTATAGAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLRQFVSEAKVQWFTYLQNCSLK*KGYRSS Trigger: TGAACTTCTATACCCTTTGCATTTGAGGGAACAATT...TTGAAGATATGTGAACCACTGGACTTTGGCCTCTGATACAAACTGCCTAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR CCA 72 bp | TCTCTTAGGCAGTTTGTATCAGAGGCCAAAGTCCAGTaGTTCACATATCTTCAACTGTGTGTGCCCATCAAC | + |
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Preference number: 3 (lower is better) Translates to: SLRQFVSEAKVQ*FTYLQLCVPIN Trigger: GTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTGGCCTCTGATACAAACTGCCTAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| 3UTR GCA 72 bp | TGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATaGAAAGGGTATAGAAGTTCACTTCTTTCACACAGA | + |
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Preference number: 3 (lower is better) Translates to: CAHQPSSNCSLK*KGYRSSLLSHR Trigger: TCTGTGTGAAAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | TCACTCTGTCACCTAGACAGCTCACTGCAGCCTAGACTTCCTGGGCTCAAGCGATCGCCCAGGCTGGAGTaGAGTGGCAAGATCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLCHLDSSLQPRLPGLKRSPRLE*SGKIRA Trigger: AGCCCTGATCTTGCCACTGCACTCCAGCCTGGGCGA...TCGCTTGAGCCCAGGAAGTCTAGGCTGCAGTGAGCTGTCTAGGTGACAGAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | GACTTCCTGGGCTCAAGCGATTCTCCCACCACAGCCACCAGAGTAGCTGAGACCTTTCTATGTGAGCGGTaGCACTTCTTGGTGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: DFLGSSDSPTTATRVAETFLCER*HFLVGP Trigger: GGGACCCACCAAGAAGTGCCACCGCTCACATAGAAA...GGTCTCAGCTACTCTGGTGGCTGTGGTGGGAGAATCGCTTGAGCCCAGGAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | GACTTCCTGGGCTCAAGCGATTCTCCCACCACAGCCACCAGAGTAGCTGAGACCCAGTGGCTACGATGGTaGCATTGTATTCTGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: DFLGSSDSPTTATRVAETQWLRW*HCILVS Trigger: AGACACCAGAATACAATGTCACCATCGTAGCCACTG...GGTCTCAGCTACTCTGGTGGCTGTGGTGGGAGAATCGCTTGAGCCCAGGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | TCACTCTGTCACCTAGACAGCTCACTGCAGCCTAGACTTCCTGGGCTCAAGCGACAGAGTCTCAGGATGTaGAGTCAAATCCTCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: SLCHLDSSLQPRLPGLKRQSLRM*SQILPT Trigger: GGTGGGGAGGATTTGACTTCACATCCTGAGACTCTG...TCGCTTGAGCCCAGGAAGTCTAGGCTGCAGTGAGCTGTCTAGGTGACAGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | CAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCGGTGGCACTTCTTGGTaGGTCCCCTCCGTCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: QSPVVHISSTVCAHQPSSGGTSW*VPSVQG Trigger: GCCTTGGACGGAGGGGACCCACCAAGAAGTGCCACC...GCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | GACTTCCTGGGCTCAAGCGATTCTCCCACCACAGCCACCAGAGTAGCTGAGACCACAGAAATTTCTATGTaGGCGGTGGCACTTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: DFLGSSDSPTTATRVAETTEISM*AVALLG Trigger: ACCAAGAAGTGCCACCGCTCACATAGAAATTTCTGT...GGTCTCAGCTACTCTGGTGGCTGTGGTGGGAGAATCGCTTGAGCCCAGGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | GCCAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAAGCGGTGGCACTTCTTaGTGGGTCCCCTCCGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: AKVQWFTYLQLCVPINPVSGGTS*WVPSVQ Trigger: TTGGACGGAGGGGACCCACCAAGAAGTGCCACCGCT...TACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | TCACTCTGTCACCTAGACAGCTCACTGCAGCCTAGACTTCCTGGGCTCAAGCGAACACAGAGACCAGGATaGAAGCAGTCCCAAGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: SLCHLDSSLQPRLPGLKRTQRPG*KQSQVA Trigger: TGCTACTTGGGACTGCTTCCATCCTGGTCTCTGTGT...TCGCTTGAGCCCAGGAAGTCTAGGCTGCAGTGAGCTGTCTAGGTGACAGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | GACTTCCTGGGCTCAAGCGATTCTCCCACCACAGCCACCAGAGTAGCTGAGACCGGATTACAGCACACTTaGCCCTGCCTGCATATTTAT | + |
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Preference number: 4 (lower is better) Translates to: DFLGSSDSPTTATRVAETGLQHT*PCLHIY Trigger: ATAAATATGCAGGCAGGGCCAAGTGTGCTGTAATCC...GGTCTCAGCTACTCTGGTGGCTGTGGTGGGAGAATCGCTTGAGCCCAGGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | CCACTGCTTCTGTTCGATAGTCAGAACTTGACAAAATATTGTGGCTCACGCCTGAGGAGATGTGGCCATTaGGCCCCAAATCCGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: PLLLFDSQNLTKYCGSRLRRCGH*APNPGQ Trigger: CTGACCCGGATTTGGGGCTCAATGGCCACATCTCCT...CAGGCGTGAGCCACAATATTTTGTCAAGTTCTGACTATCGAACAGAAGCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | CAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTCTAAGGCTCGAGCCGTaGGCACCTCCCCAGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QPSSNCSLKCKGYRSSLLLRLEP*APPQCA Trigger: TGCGCACTGGGGAGGTGCGCACGGCTCGAGCCTTAG...AAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | GACTTCCTGGGCTCAAGCGATTCTCCCACCACAGCCACCAGAGTAGCTGAGACCTTCAGCCTATCAAAGTaGTGTGATTATAGGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: DFLGSSDSPTTATRVAETFSLSK*CDYRCE Trigger: CTCACACCTATAATCACAGCACTTTGATAGGCTGAA...GGTCTCAGCTACTCTGGTGGCTGTGGTGGGAGAATCGCTTGAGCCCAGGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | TCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATGCAAACTGGGGCGTTGTCGTTaGTGTCAGCGACATACAAGG | + |
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Preference number: 4 (lower is better) Translates to: SSTVCAHQPSSNCSLKCKLGRCR*CQRHTR Trigger: CCTTGTATGTCGCTGACATCAACGACAACGCCCCAG...TTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | CAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTTCTGCGAAGACCAGATaGAGCGTGGCGGTGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QPSSNCSLKCKGYRSSLLSAKTR*SVAVAE Trigger: CTCTGCCACCGCCACGCTTCATCTGGTCTTCGCAGA...AAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | TCTCTTAGGCAGTTTGTATCAGAGGCCAAAGTCCAGTGGTTCACATATCTTCAATCAGTGGCTGTCACTTaGAACACAGGGGACCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLRQFVSEAKVQWFTYLQSVAVT*NTGDPG Trigger: CCCTGGGTCCCCTGTGTTGCAAGTGACAGCCACTGA...TTGAAGATATGTGAACCACTGGACTTTGGCCTCTGATACAAACTGCCTAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | GCCAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTACTCTTGCAAGTTGTCTaGGAAGACCAGATGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: AKVQWFTYLQLCVPINPVLLQVV*EDQMKR Trigger: ACGCTTCATCTGGTCTTCGCAGACAACTTGCAAGAG...TACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | CAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCTCTGGCAGTATCTCTTaGAAGTTGTCTGCGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: QSPVVHISSTVCAHQPSSSGSIS*KLSAKT Trigger: GGTCTTCGCAGACAACTTGCAAGAGATACTGCCAGA...GCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | CACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAAAAGATCAGGGCTCACTaGAACCTTGACCTCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HISSTVCAHQPSSNCSLKKIRAH*NLDLPG Trigger: TCCTGGGAGGTCAAGGTTGCAGTGAGCCCTGATCTT...TTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | TCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATGCAAAAAATCCTCCCCACCATaGGGTGGAATTAAGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SSTVCAHQPSSNCSLKCKKSSPP*GGIKAP Trigger: TGGAGCCTTAATTCCACCTCATGGTGGGGAGGATTT...TTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | CAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCTTGTGCTCTGGGCAGTaGTTCGGAAGTAGTAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: QSPVVHISSTVCAHQPSSLCSGQ*FGSSSL Trigger: TAAACTACTACTTCCGAAGCACTGCCCAGAGCACAA...GCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | GCCAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTACTCCAGGAGAAACACTaGAAACCATGTCTTCATTGG | + |
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Preference number: 4 (lower is better) Translates to: AKVQWFTYLQLCVPINPVLQEKH*KPCLHW Trigger: CCAATGAAGACATGGTTTGCAGTGTTTCTCCTGGAG...TACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | GCCAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAAGATGCCAAGACCACTaGTTCTGTTCGATAGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: AKVQWFTYLQLCVPINPVRCQDH*FCSIVR Trigger: TCTGACTATCGAACAGAAGCAGTGGTCTTGGCATCT...TACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | CCACTGCTTCTGTTCGATAGTCAGAACTTGACAAAATATTGTGGCTCACGCCTGCTATATTGCCCAGGCTaGTCTCAATTCTTGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PLLLFDSQNLTKYCGSRLLYCPG*SQFLGS Trigger: TGAGCCCAAGAATTGAGACCAGCCTGGGCAATATAG...CAGGCGTGAGCCACAATATTTTGTCAAGTTCTGACTATCGAACAGAAGCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | GCCAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGAGGCCAAAGTCCAGTaGTTCACATATCTTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: AKVQWFTYLQLCVPINPVEAKVQ*FTYLQL Trigger: CAGTTGAAGATATGTGAACCACTGGACTTTGGCCTC...TACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | CAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAACCATTCCTGGAGGTaGATTCTCCAAAATCTGATC | + |
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Preference number: 4 (lower is better) Translates to: QSPVVHISSTVCAHQPSSNHSWR*ILQNLI Trigger: GATCAGATTTTGGAGAATTCACCTCCAGGAATGGTT...GCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | AGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTTCACACAAGAAAGAGGCGGCTTaGCCCTGTCAGTGGCTACGA | + |
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Preference number: 4 (lower is better) Translates to: SSNCSLKCKGYRSSLLSHKKEAA*PCQWLR Trigger: TCGTAGCCACTGACAGGGGCAAGCCGCCTCTTTCTT...GTGTGAAAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | CACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAACTGGTCTCAAATTCCTaGGCTCAAGAGATTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HISSTVCAHQPSSNCSLKLVSNS*AQEILH Trigger: GTGGAGAATCTCTTGAGCGCAGGAATTTGAGACCAG...TTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | CAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTCGTCTGGTCGAAAACTaGGGCGTTGTCGTTGATGTC | + |
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Preference number: 4 (lower is better) Translates to: QPSSNCSLKCKGYRSSLLRLVEN*GVVVDV Trigger: GACATCAACGACAACGCCCCAGTTTTCGACCAGACG...AAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | TCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGTCAATATCAAGCTATaGGATCTCTGTTCTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTVCAHQPSSNCSLKCKVNIKL*DLCSSR Trigger: CCGGGAAGAACAGAGATCTCATAGCTTGATATTGAC...TTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | CAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCGAATTCTCCAAAATCTaGTCAGAGAGAGAAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QSPVVHISSTVCAHQPSSEFSKI*SEREVM Trigger: CATCACTTCTCTCTCTGATCAGATTTTGGAGAATTC...GCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | CACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAACAGCGACATACAAGGTaGTGCTTCTACTGGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HISSTVCAHQPSSNCSLKQRHTR*CFYWKK Trigger: TTTCTTCCAGTAGAAGCATCACCTTGTATGTCGCTG...TTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | CAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCTCGATAGTCAGAACTTaGCAAAATATTGTGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QSPVVHISSTVCAHQPSSSIVRT*QNIVAH Trigger: GTGAGCCACAATATTTTGTCAAGTTCTGACTATCGA...GCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | CAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCGAGACAGAGACTGAGTaGAAAGGCAATAGTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSPVVHISSTVCAHQPSSETETE*KGNSIS Trigger: TGAAATACTATTGCCTTTGCACTCAGTCTCTGTCTC...GCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | CACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAAAAACCATGTCTTCATTaGAATGTAGGGGCACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HISSTVCAHQPSSNCSLKKPCLH*NVGAHC Trigger: GCAGTGTGCCCCTACATTCCAATGAAGACATGGTTT...TTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | TCTCTTAGGCAGTTTGTATCAGAGGCCAAAGTCCAGTGGTTCACATATCTTCAAAGAACATATGTTTTGTaGTCTGGGCAGTGCTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFVSEAKVQWFTYLQRTYVL*SGQCFG Trigger: TCCGAAGCACTGCCCAGAGCACAAAACATATGTTCT...TTGAAGATATGTGAACCACTGGACTTTGGCCTCTGATACAAACTGCCTAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | AGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTTCACACCTCCACCTCCCAAAGTaGTGGGATTACAGCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSNCSLKCKGYRSSLLSHLHLPK*WDYSTL Trigger: AAGTGTGCTGTAATCCCAGCACTTTGGGAGGTGGAG...GTGTGAAAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | CACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAAGTTTGTTTTCTTAGATaGCAAGACCACTGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HISSTVCAHQPSSNCSLKVCFLR*QDHCFC Trigger: ACAGAAGCAGTGGTCTTGGCATCTAAGAAAACAAAC...TTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | TCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATGCAAACAGCACACTTGGCCCTaGCTGCATATTTATTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVCAHQPSSNCSLKCKQHTWP*LHIYLF Trigger: AAATAAATAAATATGCAGGCAGGGCCAAGTGTGCTG...TTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | AGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTTCACACTTATATCAGGATCCGTaGCAGGGTCAAGCGATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSNCSLKCKGYRSSLLSHLYQDP*QGQAIV Trigger: GACTATCGCTTGACCCTGCCACGGATCCTGATATAA...GTGTGAAAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
||
| CDS-3UTR CCA 90 bp | TCTCTTAGGCAGTTTGTATCAGAGGCCAAAGTCCAGTGGTTCACATATCTTCAATCGCTTCCACTTCCATaGTGTACCTTTCTACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFVSEAKVQWFTYLQSLPLP*CTFLHL Trigger: AAGATGTAGAAAGGTACACCATGGAAGTGGAAGCGA...TTGAAGATATGTGAACCACTGGACTTTGGCCTCTGATACAAACTGCCTAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CCA 90 bp | CAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTATAGGTGTGAGCCACTaGGCCTGTCTTCTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: QPSSNCSLKCKGYRSSLLIGVSH*ACLLNI Trigger: AATATTCAGAAGACAGGCCCAGTGGCTCACACCTAT...AAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACTGGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | TCTCTTAGGCAGTTTGTATCAGAGGCCAAAGTCCAGTGGTTCACATATCTTCAATCCTTTTTATCAAATTaGGGGGCGTGGTCATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFVSEAKVQWFTYLQSFLSN*GAWSLT Trigger: TGTTAATGACCACGCCCCTCAATTTGATAAAAAGGA...TTGAAGATATGTGAACCACTGGACTTTGGCCTCTGATACAAACTGCCTAAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | CACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAAAGTGTTTATGTCAAATaGCCTGTTTTCATCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HISSTVCAHQPSSNCSLKSVYVK*PVFIRA Trigger: TGCTCTGATGAAAACAGGTCATTTGACATAAACACT...TTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | CCACTGCTTCTGTTCGATAGTCAGAACTTGACAAAATATTGTGGCTCACGCCTGTTTTGTACCCGTATGTaGAATGCACAGATTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLLFDSQNLTKYCGSRLFCTRM*NAQIIR Trigger: TCTTATAATCTGTGCATTGCACATACGGGTACAAAA...CAGGCGTGAGCCACAATATTTTGTCAAGTTCTGACTATCGAACAGAAGCAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR TCA 90 bp | TCTCTTAGGCAGTTTGTATCAGAGGCCAAAGTCCAGTGGTTCACATATCTTCAAACTGGGCCTGTCTTCTaGATATTTTTAGGCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRQFVSEAKVQWFTYLQTGPVF*IFLGFK Trigger: TTTAAAGCCTAAAAATATTCAGAAGACAGGCCCAGT...TTGAAGATATGTGAACCACTGGACTTTGGCCTCTGATACAAACTGCCTAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR GCA 90 bp | TCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATGCAAAAATTGTTCCCTCAAATaGAAAGGGTATAGAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTVCAHQPSSNCSLKCKNCSLK*KGYRSS Trigger: TGAACTTCTATACCCTTTGCATTTGAGGGAACAATT...TTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS TCA 90 bp | GTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTCTCTGGGCCTaGGAGAAACGCCAGTCCGTGTTGGGCGGGGCTTGCGAAGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSSPFWEPLVPGLWA*EKRQSVLGGACEVR Trigger: TCTGACTTCGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520790.1 |
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| CDS-3UTR CAA 90 bp | TCACTCTGTCACCTAGACAGCTCACTGCAGCCTAGACTTCCTGGGCTCAAGCGAGAAGAAAGAGGCGGCTaGCCCCTGTCAGTGGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: SLCHLDSSLQPRLPGLKREERGG*PLSVAT Trigger: CGTAGCCACTGACAGGGGCAAGCCGCCTCTTTCTTC...TCGCTTGAGCCCAGGAAGTCTAGGCTGCAGTGAGCTGTCTAGGTGACAGAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CAA 90 bp | TCTTCAACTGTGTGTGCCCATCAACCCAGTAGCAATTGTTCCCTCAAATGCAAAGAGCGGTGGCACTTCTaGGTGGGTCCCCTCCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSTVCAHQPSSNCSLKCKERWHF*VGPLRP Trigger: TGGACGGAGGGGACCCACCAAGAAGTGCCACCGCTC...TTTGCATTTGAGGGAACAATTGCTACTGGGTTGATGGGCACACACAGTTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CAA 90 bp | GACTTCCTGGGCTCAAGCGATTCTCCCACCACAGCCACCAGAGTAGCTGAGACCATGAGAACATATGTTTaGTGCTCTGGGCAGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DFLGSSDSPTTATRVAETMRTYV*CSGQCF Trigger: GAAGCACTGCCCAGAGCACAAAACATATGTTCTCAT...GGTCTCAGCTACTCTGGTGGCTGTGGTGGGAGAATCGCTTGAGCCCAGGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CAA 90 bp | TCACTCTGTCACCTAGACAGCTCACTGCAGCCTAGACTTCCTGGGCTCAAGCGAGATAACTCTGGGTATTaGCCACCATCGGAATTAACT | + |
|
Preference number: 5 (lower is better) Translates to: SLCHLDSSLQPRLPGLKRDNSGY*PPSELT Trigger: AGTTAATTCCGATGGTGGCAAATACCCAGAGTTATC...TCGCTTGAGCCCAGGAAGTCTAGGCTGCAGTGAGCTGTCTAGGTGACAGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS TCA 90 bp | TGCGAAGTCAGAGTCTCAGGATGTGAAGTCAAATCCTCCCCACCATaGGGTGGAATTAAGGCTCCAGGAGAAACACTGCAAACCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CEVRVSGCEVKSSPP*GGIKAPGETLQTMS Trigger: AGACATGGTTTGCAGTGTTTCTCCTGGAGCCTTAATTCCACCTCATGGTGGGGAGGATTTGACTTCACATCCTGAGACTCTGACTTCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520790.1 |
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| CDS TCA 90 bp | ACCGAAGTCAGAGTCTCAGGATGTGAAGTCAAATCCTCCCCACCATaGGGTGGAATTAAGGCTCCAGGAGAAACACTGCAAACCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TEVRVSGCEVKSSPP*GGIKAPGETLQTMS Trigger: AGACATGGTTTGCAGTGTTTCTCCTGGAGCCTTAATTCCACCTCATGGTGGGGAGGATTTGACTTCACATCCTGAGACTCTGACTTCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS CCA 90 bp | GGTATCCTTGACAGAAATTTCTATGTGAGCGGTGGCACTTCTTGGTaGGTCCCCTCCGTCCAAGGCAGTCAATATCAAGCTATGAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: GILDRNFYVSGGTSW*VPSVQGSQYQAMRS Trigger: AGATCTCATAGCTTGATATTGACTGCCTTGGACGGAGGGGACCCACCAAGAAGTGCCACCGCTCACATAGAAATTTCTGTCAAGGATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520790.1 ENST00000616430.1 |
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| CDS-3UTR CAA 90 bp | CCACTGCTTCTGTTCGATAGTCAGAACTTGACAAAATATTGTGGCTCACGCCTGTCGAAAACTGGGGCGTaGTCGTTGATGTCAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: PLLLFDSQNLTKYCGSRLSKTGA*SLMSAT Trigger: TGTCGCTGACATCAACGACAACGCCCCAGTTTTCGA...CAGGCGTGAGCCACAATATTTTGTCAAGTTCTGACTATCGAACAGAAGCAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CAA 90 bp | CAAAGTCCAGTGGTTCACATATCTTCAACTGTGTGTGCCCATCAACCCAGTAGCGGGATTACAGCACACTaGGCCCTGCCTGCATATTTA | + |
|
Preference number: 5 (lower is better) Translates to: QSPVVHISSTVCAHQPSSGITAH*ALPAYL Trigger: TAAATATGCAGGCAGGGCCAAGTGTGCTGTAATCCC...GCTACTGGGTTGATGGGCACACACAGTTGAAGATATGTGAACCACTGGACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS CCA 90 bp | ATTGGTATCCTTGACAGAAATTTCTATGTGAGCGGTGGCACTTCTTaGTGGGTCCCCTCCGTCCAAGGCAGTCAATATCAAGCTATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IGILDRNFYVSGGTS*WVPSVQGSQYQAMR Trigger: TCTCATAGCTTGATATTGACTGCCTTGGACGGAGGGGACCCACCAAGAAGTGCCACCGCTCACATAGAAATTTCTGTCAAGGATACCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520790.1 ENST00000616430.1 |
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| CDS-3UTR CAA 90 bp | CCACTGCTTCTGTTCGATAGTCAGAACTTGACAAAATATTGTGGCTCACGCCTGGCTACGATGGTGACATaGTATTCTGGTGTCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLLLFDSQNLTKYCGSRLATMVT*YSGVCS Trigger: AGAGCAGACACCAGAATACAATGTCACCATCGTAGC...CAGGCGTGAGCCACAATATTTTGTCAAGTTCTGACTATCGAACAGAAGCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CAA 90 bp | CCACTGCTTCTGTTCGATAGTCAGAACTTGACAAAATATTGTGGCTCACGCCTGCAAACCATGTCTTCATaGGAATGTAGGGGCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLLFDSQNLTKYCGSRLQTMSS*ECRGTL Trigger: CAGTGTGCCCCTACATTCCAATGAAGACATGGTTTG...CAGGCGTGAGCCACAATATTTTGTCAAGTTCTGACTATCGAACAGAAGCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CAA 90 bp | TCTCTTAGGCAGTTTGTATCAGAGGCCAAAGTCCAGTGGTTCACATATCTTCAATTCGATAGTCAGAACTaGACAAAATATTGTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRQFVSEAKVQWFTYLQFDSQN*TKYCGS Trigger: TGAGCCACAATATTTTGTCAAGTTCTGACTATCGAA...TTGAAGATATGTGAACCACTGGACTTTGGCCTCTGATACAAACTGCCTAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS-3UTR CAA 90 bp | AGTAGCAATTGTTCCCTCAAATGCAAAGGGTATAGAAGTTCACTTCTTTCACACTTCCTTTTTATCAAATaGAGGGGCGTGGTCATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSNCSLKCKGYRSSLLSHFLFIK*RGVVIN Trigger: GTTAATGACCACGCCCCTCAATTTGATAAAAAGGAA...GTGTGAAAGAAGTGAACTTCTATACCCTTTGCATTTGAGGGAACAATTGCTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000616430.1 |
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| CDS CCA 72 bp | CGGGTCTCTGGGCCTGAGAGAAACGCCAGTCCGTGTTaGGCGGGGCTTGCGAAGTCAGAGTCTCAGGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: RVSGPERNASPC*AGLAKSESQDV Trigger: CACATCCTGAGACTCTGACTTCGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520790.1 |
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| CDS CCA 72 bp | GACAGAAATTTCTATGTGAGCGGTGGCACTTCTTGGTaGGTCCCCTCCGTCCAAGGCAGTCAATATCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DRNFYVSGGTSW*VPSVQGSQYQA Trigger: AGCTTGATATTGACTGCCTTGGACGGAGGGGACCCACCAAGAAGTGCCACCGCTCACATAGAAATTTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520790.1 ENST00000616430.1 |
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| CDS CCA 72 bp | CTTGACAGAAATTTCTATGTGAGCGGTGGCACTTCTTaGTGGGTCCCCTCCGTCCAAGGCAGTCAATATCAA | + |
|
Preference number: 6 (lower is better) Translates to: LDRNFYVSGGTS*WVPSVQGSQYQ Trigger: TTGATATTGACTGCCTTGGACGGAGGGGACCCACCAAGAAGTGCCACCGCTCACATAGAAATTTCTGTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520790.1 ENST00000616430.1 |
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| CDS TCA 72 bp | AGAGTCTCAGGATGTGAAGTCAAATCCTCCCCACCATaGGGTGGAATTAAGGCTCCAGGAGAAACACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RVSGCEVKSSPP*GGIKAPGETLQ Trigger: TTGCAGTGTTTCTCCTGGAGCCTTAATTCCACCTCATGGTGGGGAGGATTTGACTTCACATCCTGAGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520790.1 ENST00000616430.1 |
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| CDS GCA 72 bp | CACCATGAGGTGGAATTAAGGCTCCAGGAGAAACACTaGAAACCATGTCTTCATTGGAATGTAGGGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: HHEVELRLQEKH*KPCLHWNVGAH Trigger: GTGTGCCCCTACATTCCAATGAAGACATGGTTTGCAGTGTTTCTCCTGGAGCCTTAATTCCACCTCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520790.1 ENST00000616430.1 |
||
| CDS CAA 72 bp | CGGTCTAGGAGTTTCTCCAGAGATAACTCTGGGTATTaGCCACCATCGGAATTAACTCTAACCATTAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: RSRSFSRDNSGY*PPSELTLTINE Trigger: TTCATTAATGGTTAGAGTTAATTCCGATGGTGGCAAATACCCAGAGTTATCTCTGGAGAAACTCCTAGACCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520790.1 ENST00000616430.1 |
||
| CDS CAA 72 bp | TCATACCTGTTTTCTCATCCAATGAGAACATATGTTTaGTGCTCTGGGCAGTGCTTCGGAAGTAGTAGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SYLFSHPMRTYV*CSGQCFGSSSL Trigger: TAAACTACTACTTCCGAAGCACTGCCCAGAGCACAAAACATATGTTCTCATTGGATGAGAAAACAGGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520790.1 ENST00000616430.1 |
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