Pregenerated sensors for PCDHGB5 (Homo sapiens)

Ensembl gene IDs: ENSG00000276547

Ensembl transcript IDs: ENST00000617380.2, ENST00000621169.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTCTCTGGGCCTaGGAGAAACGCCAGTCCGTGTTGGGCGGGGCTTGCAACTCAGGA	+
Preference number: 5 (lower is better) Translates to: VSSPFWEPLVPGLWA*EKRQSVLGGACNSG Trigger: TCCTGAGTTGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617380.2
CDS TCA 90 bp	AGCTTTCTGAGCAGCTCTGACTTCCCTAAGACAACTCATTGGACTTaGAAATGTACGATAGTTTCATGTAAATACAGAAAATTGGGTGGG	+
Preference number: 5 (lower is better) Translates to: SFLSSSDFPKTTHWT*KCTIVSCKYRKLGG Trigger: CCCACCCAATTTTCTGTATTTACATGAAACTATCGTACATTTTCAAGTCCAATGAGTTGTCTTAGGGAAGTCAGAGCTGCTCAGAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000621169.1
CDS TCA 90 bp	CTCTTCAAAATCCAGTTTCTTTTGAGTGGTAATTTCTCCGCTCTTTaGATTCAGACTAAAGATTTGCCCGGTTCTGTAGAAGGAATAAGT	+
Preference number: 5 (lower is better) Translates to: LFKIQFLLSGNFSAL*IQTKDLPGSVEGIS Trigger: ACTTATTCCTTCTACAGAACCGGGCAAATCTTTAGTCTGAATTCAAAGAGCGGAGAAATTACCACTCAAAAGAAACTGGATTTTGAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000617380.2 ENST00000621169.1
CDS CCA 72 bp	CGGGTCTCTGGGCCTGAGAGAAACGCCAGTCCGTGTTaGGCGGGGCTTGCAACTCAGGATGGGAAGTCGACT	+
Preference number: 6 (lower is better) Translates to: RVSGPERNASPC*AGLATQDGKST Trigger: AGTCGACTTCCCATCCTGAGTTGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617380.2
CDS TCA 72 bp	ATCCAGTTTCTTTTGAGTGGTAATTTCTCCGCTCTTTaGATTCAGACTAAAGATTTGCCCGGTTCTGTAGAA	+
Preference number: 6 (lower is better) Translates to: IQFLLSGNFSAL*IQTKDLPGSVE Trigger: TTCTACAGAACCGGGCAAATCTTTAGTCTGAATTCAAAGAGCGGAGAAATTACCACTCAAAAGAAACTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000617380.2 ENST00000621169.1
CDS TCA 72 bp	AGCAGCTCTGACTTCCCTAAGACAACTCATTGGACTTaGAAATGTACGATAGTTTCATGTAAATACAGAAAA	+
Preference number: 6 (lower is better) Translates to: SSSDFPKTTHWT*KCTIVSCKYRK Trigger: TTTTCTGTATTTACATGAAACTATCGTACATTTTCAAGTCCAATGAGTTGTCTTAGGGAAGTCAGAGCTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621169.1

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