Pregenerated sensors for PCDHGA3 (Homo sapiens)
Ensembl gene IDs: ENSG00000254245Ensembl transcript IDs: ENST00000253812.8, ENST00000612467.1, ENST00000619750.1
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTAGCGGGCGCTCAATCCCATGGTGCCGGCACCCCCTCCCAGGGTaGAGCTCCCATCAGCAGCTTCACTGGCGGACGCCAAGATCATGG | + |
|
Preference number: 1 (lower is better) Translates to: RSGRSIPWCRHPLPG*SSHQQLHWRTPRSW Trigger: CCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | GGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTaGTGCCTGGGATGTAGACATTCTGGCGGTAGTCGGGCACGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: GPCHPACQLRWSVWH*CLGCRHSGGSRARA Trigger: AGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 90 bp | GCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTaGGATGTAGACATTCTGGCGGTAGTCGGGCACGTGCTGCAGGGT | + |
|
Preference number: 1 (lower is better) Translates to: AIPLASCVGQCGIAA*DVDILAVVGHVLQG Trigger: ACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 90 bp | CTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTaGCATTGCTGCCTGGGATGTAGACATTCTGGCGGTAGTCGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: LLGPCHPACQLRWSV*HCCLGCRHSGGSRA Trigger: TGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | CCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTaGCTGGGATGTAGACATTCTGGCGGTAGTCGGGCACGTGCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: PCHPACQLRWSVWHC*LGCRHSGGSRARAA Trigger: TGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | TCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTaGCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: SCPTSSCCHCHLLGP*HPACQLRWSVWHCC Trigger: GCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 90 bp | CTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTaGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: LLLLARLLLVAIATC*GLAIPLASCVGQCG Trigger: GCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | TCATGGCTTGCAGCATCTCTGTGTCAAACTGGTTGTTGGGCCAGGTaGCGGTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: SWLAASLCQTGCWAR*RCHRHFGSRWCRVS Trigger: AGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | GAGCTCCCATCAGCAGCTTCACTGGCGGACGCCAAGATCATGGCTTaGAGCATCTCTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTG | + |
|
Preference number: 1 (lower is better) Translates to: ELPSAASLADAKIMA*SISVSNWLLGQVPV Trigger: CACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | TCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTaGCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTGGGATGTAGA | + |
|
Preference number: 1 (lower is better) Translates to: SSCCHCHLLGPCHPA*QLRWSVWHCCLGCR Trigger: TCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 90 bp | CTGGCGGACGCCAAGATCATGGCTTGCAGCATCTCTGTGTCAAACTaGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCG | + |
|
Preference number: 1 (lower is better) Translates to: LADAKIMACSISVSN*LLGQVPVSSPFWEP Trigger: CGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | CTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTaGTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGT | + |
|
Preference number: 1 (lower is better) Translates to: LLLLLARLLLVAIAT*WGLAIPLASCVGQC Trigger: ACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | GGCCTCCATGTTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTaGCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: GLHVTSSPSCPTSSC*HCHLLGPCHPACQL Trigger: CAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAACATGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 90 bp | ACGCCAAGATCATGGCTTGCAGCATCTCTGTGTCAAACTGGTTGTTaGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCGCTGGTGC | + |
|
Preference number: 1 (lower is better) Translates to: TPRSWLAASLCQTGC*ARCRCHRHFGSRWC Trigger: GCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | CATGTTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTaGCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGG | + |
|
Preference number: 1 (lower is better) Translates to: HVTSSPSCPTSSCCH*HLLGPCHPACQLRW Trigger: CCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 90 bp | AGGACAAAAACTTCAACCTGCCCATTCTGCCCAGAATCTCGGTCATaGACGTCGATAAGAGCAATTTCTCTTCCAACGGTGCCCTCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: RTKTSTCPFCPESRS*TSIRAISLPTVPSS Trigger: AGAAGAGGGCACCGTTGGAAGAGAAATTGCTCTTATCGACGTGCATGACCGAGATTCTGGGCAGAATGGGCAGGTTGAAGTTTTTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CCA 90 bp | TGCCGGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGGCGGACGCATTTTGGGAGCCGCTaGTGCCGGGTCTCTGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: CRHPLPGWSSHQQLHWRTHFGSR*CRVSGP Trigger: AGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATG...CGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGTTTGGGAGCCGCTGGTaGCGGGTCTCTGGGCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PAGALPSRLPAALVSVALFGSRW*RVSGPE Trigger: CTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAA...CAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTCGCGGTCCAGGGATGTaGCCGTCACTAAGCGGTAAT | + |
|
Preference number: 2 (lower is better) Translates to: LLGQVPVSSPFWEPLVPGRGPGM*PSLSGN Trigger: ATTACCGCTTAGTGACGGCCACATCCCTGGACCGCG...ACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR TCA 90 bp | GGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGGCGGACGCCAAAAGACACTTGAGCATTaGATCCCTCGTCAGGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GTPSQGGAPISSFTGGRQKTLEH*IPRQGQ Trigger: CTGACCCTGACGAGGGATTCAATGCTCAAGTGTCTT...TTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTCCAGCTCTGGATACTTaGCCCCCTCAGAGACGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LLGQVPVSSPFWEPLVPGPALDT*PPQRRY Trigger: ATAGCGTCTCTGAGGGGGCCAAGTATCCAGAGCTGG...ACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 90 bp | GCGGACGCCAAGATCATGGCTTGCAGCATCTCTGTGTCAAACTGGTaGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ADAKIMACSISVSNW*LGQVPVSSPFWEPL Trigger: CAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 90 bp | GGAGCTCCCATCAGCAGCTTCACTGGCGGACGCCAAGATCATGGCTaGCAGCATCTCTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGT | + |
|
Preference number: 2 (lower is better) Translates to: GAPISSFTGGRQDHG*QHLCVKLVVGPGAG Trigger: ACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 90 bp | TTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTaGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FLPDFFLLPLPPAGA*PSRLPAALVSVALL Trigger: CAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | CCCATGGTGCCGGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGACTATCACTTGGATGTaGAAGTTGCCAGAGTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: PMVPAPPPRVELPSAASLTITWM*KLPEWT Trigger: TGTCCACTCTGGCAACTTGCACATCCAAGTGATAGT...CAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 90 bp | GACGCCAAGATCATGGCTTGCAGCATCTCTGTGTCAAACTGGTTGTaGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: DAKIMACSISVSNWL*GQVPVSSPFWEPLV Trigger: CACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR TCA 90 bp | AGCATCTCTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTCAGTGGCATTCACCGTaGGCAGCCGGGTACCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: SISVSNWLLGQVPVSSPFQWHSP*AAGYPQ Trigger: CTGTGGGTACCCGGCTGCTCACGGTGAATGCCACTG...AAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCATCTCTGTGTCAAACTaGTTGTTGGGCCAGGTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: LLLVAIATCWGLAIPLASISVSN*LLGQVP Trigger: CGGCACCTGGCCCAACAACCAGTTTGACACAGAGAT...GCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CCA 90 bp | GCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTGGGATGTACGGACGCCAAGATCATaGCTTGCAGCATCTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: AIPLASCVGQCGIAAWDVRTPRS*LAASLC Trigger: ACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCG...TACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 90 bp | CCATGTTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATaGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PCYFFSFLPDFFLLP*PPAGALPSRLPAAL Trigger: CAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR TCA 90 bp | CTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCGCCCTCTTCTGGGACTaGGCTTGTGAGAGACGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LCQTGCWARCRCHRHFGSALFWD*ACERRD Trigger: ATCACGTCTCTCACAAGCTCAGTCCCAGAAGAGGGC...GCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | GCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTGGGATGTAAGTGTCCTCGGTCAATaGATAAGTGATGCGGGCGTT | + |
|
Preference number: 2 (lower is better) Translates to: AIPLASCVGQCGIAAWDVSVLGQ*ISDAGV Trigger: AACGCCCGCATCACTTATGCATTGACCGAGGACACT...TACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCGGGCTTCCCCCATCTaGGGCTCTCAGACTAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: FSFLPDFFLLPLPPAGALRASPI*GSQTNV Trigger: AACATTAGTCTGAGAGCCTCAGATGGGGGAAGCCCG...CAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCTTGGATGTGCAAGTTaGCAGAGTGGACAGGGTCGC | + |
|
Preference number: 2 (lower is better) Translates to: FSFLPDFFLLPLPPAGALLGCAS*QSGQGR Trigger: GCGACCCTGTCCACTCTGGCAACTTGCACATCCAAG...CAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CCA 90 bp | GCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTGGGATGTATCCAGGACTATCACTTaGATGTGCAAGTTGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: AIPLASCVGQCGIAAWDVSRTIT*MCKLPE Trigger: CTCTGGCAACTTGCACATCCAAGTGATAGTCCTGGA...TACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CCA 90 bp | AGCATCTCTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTAACGCCAGTCCGTGTTaGGCGGGGCTTGCTGAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SISVSNWLLGQVPVSSPFNASPC*AGLAEV Trigger: TACTTCAGCAAGCCCCGCCCAACACGGACTGGCGTT...AAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGCCTTGCCATCCCGCTTaGCAGCTGCGTTGGTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLLARLLLVAIATCWPCHPA*QLRWSV Trigger: CACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGG...CCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CCA 90 bp | AGCATCTCTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGCAAGTTGCCAGAGTaGACAGGGTCGCCACCATCA | + |
|
Preference number: 2 (lower is better) Translates to: SISVSNWLLGQVPVSSPFCKLPE*TGSPPS Trigger: TGATGGTGGCGACCCTGTCCACTCTGGCAACTTGCA...AAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGTGCGGGCGTTGTTGTTaGTATCTGGGTCCTGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLLARLLLVAIATCWCGRCC*YLGPGL Trigger: CAGCCCAGGACCCAGATAGCAACAACAACGCCCGCA...CCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCACTAATGTTATATTCTaGTATTTGTTCGCGGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLLVAIATCWGLAIPLASTNVIF*YLFAVQ Trigger: CTGGACCGCGAACAAATATCAGAATATAACATTAGT...GCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR TCA 90 bp | TTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGCGGTCAATGCATAAGTaGTGCGGGCGTTGTTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLLARLLLVAIATCWRSMHK*CGRCCC Trigger: GCAACAACAACGCCCGCATCACTTATGCATTGACCG...CCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGTTTCTCTTCCAACGGTaGCCTCTTCTGGGACTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLLARLLLVAIATCWFLFQR*PLLGLS Trigger: GCTCAGTCCCAGAAGAGGGCACCGTTGGAAGAGAAA...CCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CCA 90 bp | TTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGTGTCAAACTGGTTGTTaGGCCAGGTGCCGGTGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLLARLLLVAIATCWCQTGC*ARCRCH Trigger: ATGACACCGGCACCTGGCCCAACAACCAGTTTGACA...CCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | AGCATCTCTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTCCAGAATCTCGGTCATaGACGTCGATAAGAGCAATT | + |
|
Preference number: 2 (lower is better) Translates to: SISVSNWLLGQVPVSSPFPESRS*TSIRAI Trigger: AATTGCTCTTATCGACGTGCATGACCGAGATTCTGG...AAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGTGGTCAGTGTGGCATTaGTGCCTGGGATGTAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: LLLLLLARLLLVAIATCWWSVWH*CLGCRH Trigger: ATGTCTACATCCCAGGCAGCAATGCCACACTGACCA...CCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAGAGTGTCCTCGGTCAATGCATAAGTGATGCGGGCGTTGTTGTTGCTATCACAAAAACTTCAACCTaGCCATTCTGCCCAGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: LESVLGQCISDAGVVVAITKTST*PFCPES Trigger: AGATTCTGGGCAGAATGGGCAGGTTGAAGTTTTTGT...GATAGCAACAACAACGCCCGCATCACTTATGCATTGACCGAGGACACTCTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR GCA 90 bp | CGGTCATGCACGTCGATAAGAGCAATTTCTCTTCCAACGGTGCCCTCTTCTGGGACCTGGTCCATCCTGTaGTTCAATTTTAATTTCATA | + |
|
Preference number: 2 (lower is better) Translates to: RSCTSIRAISLPTVPSSGTWSIL*FNFNFI Trigger: TATGAAATTAAAATTGAAGCACAGGATGGACCAGGT...CCCAGAAGAGGGCACCGTTGGAAGAGAAATTGCTCTTATCGACGTGCATGACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTCCGTAGCGGGCGCTCAATCCCATGGTGCCGGCACCCCCTCCCAGGGTGGACCAGCTCTGGATACTaGGCCCCCTCAGAGACGCTA | + |
|
Preference number: 3 (lower is better) Translates to: GVRSGRSIPWCRHPLPGWTSSGY*APSETL Trigger: TAGCGTCTCTGAGGGGGCCAAGTATCCAGAGCTGGT...CCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTCCGTAGCGGGCGCTCAATCCCATGGTGCCGGCACCCCCTCCCAGGGTGGCGCCAAGATCATGGCTaGCAGCATCTCTGTGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GVRSGRSIPWCRHPLPGWRQDHG*QHLCVK Trigger: TTTGACACAGAGATGCTGCAAGCCATGATCTTGGCG...CCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 72 bp | GCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTaGGTTGGTCAGTGTGGCATTGCTGCCTGGGATGTA | + |
|
Preference number: 3 (lower is better) Translates to: ATCWGLAIPLAS*VGQCGIAAWDV Trigger: TACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 72 bp | TGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTaGCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CHCHLLGPCHPA*QLRWSVWHCCL Trigger: CAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 72 bp | CCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTaGCTGGGATGTAGACATTCTGGCGGTAGTCGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PACQLRWSVWHC*LGCRHSGGSRA Trigger: TGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 72 bp | CTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTaGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LARLLLVAIATC*GLAIPLASCVG Trigger: ACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCGTGATGCGGGCGTTGTaGTTGCTATCTGGGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLVAIATCWGLAIPLASVMRAL*LLSGSW Trigger: CCAGGACCCAGATAGCAACAACAACGCCCGCATCAC...GCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CAA 90 bp | GCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTGGGATGTAGTGTCAAACTGGTTGTaGGGCCAGGTGCCGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: AIPLASCVGQCGIAAWDVVSNWL*GQVPVS Trigger: TGACACCGGCACCTGGCCCAACAACCAGTTTGACAC...TACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 72 bp | GCAGCATCTCTGTGTCAAACTGGTTGTTGGGCCAGGTaGCGGTGTCATCGCCATTTTGGGAGCCGCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AASLCQTGCWAR*RCHRHFGSRWC Trigger: GCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 72 bp | CATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTaGTGCCTGGGATGTAGACATTCTGGCGGTAGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: HPACQLRWSVWH*CLGCRHSGGSR Trigger: CCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 72 bp | CTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTaGTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLARLLLVAIAT*WGLAIPLASCV Trigger: AACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 72 bp | CGGGTCTCTGGGCCTGAGAGAAACGCCAGTCCGTGTTaGGCGGGGCTTGCTGAAGTAGGTTGGAATCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RVSGPERNASPC*AGLAEVGWNLL Trigger: AAGGAGATTCCAACCTACTTCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 72 bp | CTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTaGGATGTAGACATTCTGGCGGTAGTCGGGCACGTG | + |
|
Preference number: 3 (lower is better) Translates to: LASCVGQCGIAA*DVDILAVVGHV Trigger: CACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 72 bp | CCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTaGCATTGCTGCCTGGGATGTAGACATTCTGGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: PCHPACQLRWSV*HCCLGCRHSGG Trigger: ACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGGTGCCGGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGGTAAACATTGGTGGGTaGTCATTTGCATCCAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: PMVPAPPPRVELPSAASLVNIGG*SFASRT Trigger: AGTCCTGGATGCAAATGACAACCCACCAATGTTTAC...CAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCATGCGGGCGTTGTTGTaGCTATCTGGGTCCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LCQTGCWARCRCHRHFGSMRALL*LSGSWA Trigger: AGCCCAGGACCCAGATAGCAACAACAACGCCCGCAT...GCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGACCGTGACTAGAATCTaGGCTCTTGAAAGAAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: PAGALPSRLPAALVSVALTVTRI*ALERRP Trigger: AGGTCTTCTTTCAAGAGCCAAGATTCTAGTCACGGT...CAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 72 bp | TCCAGGACTATCACTTGGATGTGCAAGTTGCCAGAGTaGACAGGGTCGCCACCATCAGAGGCAACCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SRTITWMCKLPE*TGSPPSEATRT Trigger: TGTCCTGGTTGCCTCTGATGGTGGCGACCCTGTCCACTCTGGCAACTTGCACATCCAAGTGATAGTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 72 bp | TCATGGCTTGCAGCATCTCTGTGTCAAACTGGTTGTTaGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SWLAASLCQTGC*ARCRCHRHFGS Trigger: GCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 72 bp | GCCAAGATCATGGCTTGCAGCATCTCTGTGTCAAACTaGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: AKIMACSISVSN*LLGQVPVSSPF Trigger: AAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 72 bp | TCCCATCAGCAGCTTCACTGGCGGACGCCAAGATCATaGCTTGCAGCATCTCTGTGTCAAACTGGTTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SHQQLHWRTPRS*LAASLCQTGCW Trigger: CCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCATCCAGGACTATCACTaGGATGTGCAAGTTGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCQTGCWARCRCHRHFGSIQDYH*DVQVAR Trigger: TCTGGCAACTTGCACATCCAAGTGATAGTCCTGGAT...GCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 72 bp | ACTTCAACCTGCCCATTCTGCCCAGAATCTCGGTCATaGACGTCGATAAGAGCAATTTCTCTTCCAACGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TSTCPFCPESRS*TSIRAISLPTV Trigger: CACCGTTGGAAGAGAAATTGCTCTTATCGACGTGCATGACCGAGATTCTGGGCAGAATGGGCAGGTTGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR TCA 72 bp | AGCAATTTCTCTTCCAACGGTGCCCTCTTCTGGGACTaGGCTTGTGAGAGACGTGATTGTAATTTCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SNFSSNGALFWD*ACERRDCNFWS Trigger: GCTCCAGAAATTACAATCACGTCTCTCACAAGCTCAGTCCCAGAAGAGGGCACCGTTGGAAGAGAAATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR GCA 72 bp | AGATTTCCCAGGACAAAAACTTCAACCTGCCCATTCTaGCCAGAATCTCGGTCATGCACGTCGATAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RFPRTKTSTCPF*PESRSCTSIRA Trigger: TGCTCTTATCGACGTGCATGACCGAGATTCTGGGCAGAATGGGCAGGTTGAAGTTTTTGTCCTGGGAAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CCA 72 bp | TGTTATATTCTGATATTTGTTCGCGGTCCAGGGATGTaGCCGTCACTAAGCGGTAATATTGATCTATTGATT | + |
|
Preference number: 3 (lower is better) Translates to: CYILIFVRGPGM*PSLSGNIDLLI Trigger: AATCAATAGATCAATATTACCGCTTAGTGACGGCCACATCCCTGGACCGCGAACAAATATCAGAATATAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | GGGGTCCGTAGCGGGCGCTCAATCCCATGGTGCCGGCACCCCCTCCCAGGGTGGGCAGGGCCAGTCCTCTaGCATTTCGGAAACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVRSGRSIPWCRHPLPGWAGPVL*HFGNSG Trigger: GCCTGAGTTTCCGAAATGGCAGAGGACTGGCCCTGC...CCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCACCTGCTGGGGCCTTaGCATCCCGCTTGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGALPSRLPAALVSVALHLLGP*HPACQL Trigger: CAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTG...CAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CCA 90 bp | TGCCGGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGGCGGACGAACGCCAGTCCGTGTTaGGCGGGGCTTGCTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CRHPLPGWSSHQQLHWRTNASPC*AGLAEV Trigger: TACTTCAGCAAGCCCCGCCCAACACGGACTGGCGTT...CGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | GGGGTCCGTAGCGGGCGCTCAATCCCATGGTGCCGGCACCCCCTCCCAGGGTGGAGTGTCCTCGGTCAATaGATAAGTGATGCGGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVRSGRSIPWCRHPLPGWSVLGQ*ISDAGV Trigger: AACGCCCGCATCACTTATGCATTGACCGAGGACACT...CCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | GCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTGGGATGTACGCTCAATCCCATGGTaGCGGCACCCCCTCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIPLASCVGQCGIAAWDVRSIPW*RHPLPG Trigger: CCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCG...TACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CCA 90 bp | CCCATGGTGCCGGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGCGCGGTCCAGGGATGTaGCCGTCACTAAGCGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PMVPAPPPRVELPSAASLRGPGM*PSLSGN Trigger: ATTACCGCTTAGTGACGGCCACATCCCTGGACCGCG...CAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR TCA 90 bp | GGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGGCGGACGCCAACGGGCTTCCCCCATCTaGGGCTCTCAGACTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTPSQGGAPISSFTGGRQRASPI*GSQTNV Trigger: AACATTAGTCTGAGAGCCTCAGATGGGGGAAGCCCG...TTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 72 bp | TTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTaGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLPPAGALPSR*PAALVSVALLP Trigger: AGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGGCCCTCTTCTGGGACTaGGCTTGTGAGAGACGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PAGALPSRLPAALVSVALALFWD*ACERRD Trigger: ATCACGTCTCTCACAAGCTCAGTCCCAGAAGAGGGC...CAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGATCCCGCTTGCCAGCTaGGTTGGTCAGTGTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PAGALPSRLPAALVSVALIPLAS*VGQCGI Trigger: AATGCCACACTGACCAACGCAGCTGGCAAGCGGGAT...CAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCCCTTGCCATCCCGCTTaGCAGCTGCGTTGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLVAIATCWGLAIPLASPCHPA*QLRWSV Trigger: CACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGG...GCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CCA 90 bp | TGCCGGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGGCGGACGTCCAGGACTATCACTTaGATGTGCAAGTTGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRHPLPGWSSHQQLHWRTSRTIT*MCKLPE Trigger: CTCTGGCAACTTGCACATCCAAGTGATAGTCCTGGA...CGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 72 bp | GACTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTaGCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DFFLLPLPPAGA*PSRLPAALVSV Trigger: CACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGGTTGCCATTGCCACCTaGTGGGGCCTTGCCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FSFLPDFFLLPLPPAGALVAIAT*WGLAIP Trigger: CGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAAC...CAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CCA 90 bp | GCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTGGGATGTACCAGCTCTGGATACTTaGCCCCCTCAGAGACGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AIPLASCVGQCGIAAWDVPALDT*PPQRRY Trigger: ATAGCGTCTCTGAGGGGGCCAAGTATCCAGAGCTGG...TACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR TCA 90 bp | CGGTCATGCACGTCGATAAGAGCAATTTCTCTTCCAACGGTGCCCTCTTCTGGGCAGTGGCATTCACCGTaGGCAGCCGGGTACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RSCTSIRAISLPTVPSSGQWHSP*AAGYPQ Trigger: CTGTGGGTACCCGGCTGCTCACGGTGAATGCCACTG...CCCAGAAGAGGGCACCGTTGGAAGAGAAATTGCTCTTATCGACGTGCATGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR TCA 90 bp | GCCATCCCGCTTGCCAGCTGCGTTGGTCAGTGTGGCATTGCTGCCTGGGATGTACGGTCAATGCATAAGTaGTGCGGGCGTTGTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIPLASCVGQCGIAAWDVRSMHK*CGRCCC Trigger: GCAACAACAACGCCCGCATCACTTATGCATTGACCG...TACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTTCAGTGTGGCATTGCTaGCTGGGATGTAGACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGQVPVSSPFWEPLVPGSVWHC*LGCRHS Trigger: AGAATGTCTACATCCCAGGCAGCAATGCCACACTGA...ACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCTTGGATGTGCAAGTTaGCAGAGTGGACAGGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LCQTGCWARCRCHRHFGSLGCAS*QSGQGR Trigger: GCGACCCTGTCCACTCTGGCAACTTGCACATCCAAG...GCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCAGAGTGGACAGGGTCGCCACCATCAGAGGCAACCAGGACAAGCTGGTTTTCTCTTCCAACGGTaGCCTCTTCTGGGACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCQSGQGRHHQRQPGQAGFLFQR*PLLGLS Trigger: GCTCAGTCCCAGAAGAGGGCACCGTTGGAAGAGAAA...ACCAGCTTGTCCTGGTTGCCTCTGATGGTGGCGACCCTGTCCACTCTGGCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | TTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGTTTGGGAGCCGCTGGTaGCGGGTCTCTGGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLARLLLVAIATCWFGSRW*RVSGPE Trigger: CTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAA...CCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCTGGTCAGTGTGGCATTaGTGCCTGGGATGTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLVAIATCWGLAIPLASWSVWH*CLGCRH Trigger: ATGTCTACATCCCAGGCAGCAATGCCACACTGACCA...GCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTACTTCTTCTCCTTCTTaGCCGACTTCTTCTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGQVPVSSPFWEPLVPGTSSPS*PTSSCC Trigger: GCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGT...ACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 72 bp | TTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATaGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFSFLPDFFLLP*PPAGALPSRLP Trigger: TGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCGCCAAGATCATGGCTTaGAGCATCTCTGTGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLVAIATCWGLAIPLASAKIMA*SISVSN Trigger: GTTTGACACAGAGATGCTGCAAGCCATGATCTTGGC...GCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 72 bp | TGTTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTaGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CYFFSFLPDFFL*PLPPAGALPSR Trigger: GCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CTGGAGAGTGTCCTCGGTCAATGCATAAGTGATGCGGGCGTTGTTGTTGCTATCTGCGGGCGTTGTTGTTaGTATCTGGGTCCTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LESVLGQCISDAGVVVAICGRCC*YLGPGL Trigger: CAGCCCAGGACCCAGATAGCAACAACAACGCCCGCA...GATAGCAACAACAACGCCCGCATCACTTATGCATTGACCGAGGACACTCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| 3UTR CAA 72 bp | CCATGTTACTTCTTCTCCTTCTTGCCCGACTTCTTCTaGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PCYFFSFLPDFF*LPLPPAGALPS Trigger: GGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCACAAAAACTTCAACCTaGCCATTCTGCCCAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLVAIATCWGLAIPLASTKTST*PFCPES Trigger: AGATTCTGGGCAGAATGGGCAGGTTGAAGTTTTTGT...GCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR TCA 90 bp | CGGTCATGCACGTCGATAAGAGCAATTTCTCTTCCAACGGTGCCCTCTTCTGGGAAGACACTTGAGCATTaGATCCCTCGTCAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSCTSIRAISLPTVPSSGKTLEH*IPRQGQ Trigger: CTGACCCTGACGAGGGATTCAATGCTCAAGTGTCTT...CCCAGAAGAGGGCACCGTTGGAAGAGAAATTGCTCTTATCGACGTGCATGACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | TTACTTCTTCTCCTTCTTGCCCGACTTCTTCTTGTTGCCATTGCCACCTGCTGGTCTTCTTGTTGCCATTaGCACCTGCTGGGGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLARLLLVAIATCWSSCCH*HLLGPC Trigger: GCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGA...CCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCCTCACTGAGTTAAGATaGAAAATCTCAGCGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLVAIATCWGLAIPLASLTELR*KISAIF Trigger: GAAAATCGCTGAGATTTTCCATCTTAACTCAGTGAG...GCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CGGTCATGCACGTCGATAAGAGCAATTTCTCTTCCAACGGTGCCCTCTTCTGGGACTATCACTTGGATGTaGAAGTTGCCAGAGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RSCTSIRAISLPTVPSSGTITWM*KLPEWT Trigger: TGTCCACTCTGGCAACTTGCACATCCAAGTGATAGT...CCCAGAAGAGGGCACCGTTGGAAGAGAAATTGCTCTTATCGACGTGCATGACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CTGGAGAGTGTCCTCGGTCAATGCATAAGTGATGCGGGCGTTGTTGTTGCTATCCCAGAATCTCGGTCATaGACGTCGATAAGAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LESVLGQCISDAGVVVAIPESRS*TSIRAI Trigger: AATTGCTCTTATCGACGTGCATGACCGAGATTCTGG...GATAGCAACAACAACGCCCGCATCACTTATGCATTGACCGAGGACACTCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR TCA 90 bp | CGGTCATGCACGTCGATAAGAGCAATTTCTCTTCCAACGGTGCCCTCTTCTGGGACTAATGTTATATTCTaGTATTTGTTCGCGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSCTSIRAISLPTVPSSGTNVIF*YLFAVQ Trigger: CTGGACCGCGAACAAATATCAGAATATAACATTAGT...CCCAGAAGAGGGCACCGTTGGAAGAGAAATTGCTCTTATCGACGTGCATGACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR GCA 90 bp | CTGGAGAGTGTCCTCGGTCAATGCATAAGTGATGCGGGCGTTGTTGTTGCTATCACCTGGTCCATCCTGTaGTTCAATTTTAATTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LESVLGQCISDAGVVVAITWSIL*FNFNFI Trigger: TATGAAATTAAAATTGAAGCACAGGATGGACCAGGT...GATAGCAACAACAACGCCCGCATCACTTATGCATTGACCGAGGACACTCTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CAA 90 bp | TGCCGGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGGCGGACGACCAGCTCTGGATACTaGGCCCCCTCAGAGACGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CRHPLPGWSSHQQLHWRTTSSGY*APSETL Trigger: TAGCGTCTCTGAGGGGGCCAAGTATCCAGAGCTGGT...CGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CAA 90 bp | GGCACCCCCTCCCAGGGTGGAGCTCCCATCAGCAGCTTCACTGGCGGACGCCAAATGCGGGCGTTGTTGTaGCTATCTGGGTCCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTPSQGGAPISSFTGGRQMRALL*LSGSWA Trigger: AGCCCAGGACCCAGATAGCAACAACAACGCCCGCAT...TTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTACCGTGACTAGAATCTaGGCTCTTGAAAGAAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: LLGQVPVSSPFWEPLVPGTVTRI*ALERRP Trigger: AGGTCTTCTTTCAAGAGCCAAGATTCTAGTCACGGT...ACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CAA 90 bp | TCTGTGTCAAACTGGTTGTTGGGCCAGGTGCCGGTGTCATCGCCATTTTGGGAGGTGATGCGGGCGTTGTaGTTGCTATCTGGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSNWLLGQVPVSSPFWEVMRAL*LLSGSW Trigger: CCAGGACCCAGATAGCAACAACAACGCCCGCATCAC...CTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CAA 90 bp | AGTTGCCAGAGTGGACAGGGTCGCCACCATCAGAGGCAACCAGGACAAGCTGGTATCCAGGACTATCACTaGGATGTGCAAGTTGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCQSGQGRHHQRQPGQAGIQDYH*DVQVAR Trigger: TCTGGCAACTTGCACATCCAAGTGATAGTCCTGGAT...ACCAGCTTGTCCTGGTTGCCTCTGATGGTGGCGACCCTGTCCACTCTGGCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS-3UTR CAA 90 bp | CTTCTTCTTGTTGCCATTGCCACCTGCTGGGGCCTTGCCATCCCGCTTGCCAGCGTAAACATTGGTGGGTaGTCATTTGCATCCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LLLVAIATCWGLAIPLASVNIGG*SFASRT Trigger: AGTCCTGGATGCAAATGACAACCCACCAATGTTTAC...GCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612467.1 |
||
| CDS TCA 90 bp | CTCTGCCATTTCGGAAACTCAGGCAATTGGTCATTTCCTTTTCGGTaGATCGCTTTCTCTGAATTCGGTTCCAGTTTCCTACGACGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LCHFGNSGNWSFPFR*IAFSEFGSSFLRRT Trigger: AGTCCGTCGTAGGAAACTGGAACCGAATTCAGAGAAAGCGATTCACCGAAAAGGAAATGACCAATTGCCTGAGTTTCCGAAATGGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253812.8 ENST00000619750.1 |
||
| CDS TCA 90 bp | AAACTCAGGCAATTGGTCATTTCCTTTTCGGTGAATCGCTTTCTCTaGATTCGGTTCCAGTTTCCTACGACGGACTCCAATCTTATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLRQLVISFSVNRFL*IRFQFPTTDSNLIF Trigger: GAAAATAAGATTGGAGTCCGTCGTAGGAAACTGGAACCGAATTCAGAGAAAGCGATTCACCGAAAAGGAAATGACCAATTGCCTGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253812.8 ENST00000619750.1 |
||
| CDS CAA 72 bp | GAGGTTGGCAGCCGCCCCGGATCTTCTGAGTCTGATTaGCTGGTTCTTTGCATTTTAGGAGCAAGGAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: EVGSRPGSSESD*LVLCILGARKW Trigger: CCATTTCCTTGCTCCTAAAATGCAAAGAACCAGCAAATCAGACTCAGAAGATCCGGGGCGGCTGCCAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253812.8 ENST00000619750.1 |
||
| CDS TCA 72 bp | TTCGGAAACTCAGGCAATTGGTCATTTCCTTTTCGGTaGATCGCTTTCTCTGAATTCGGTTCCAGTTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: FGNSGNWSFPFR*IAFSEFGSSFL Trigger: TAGGAAACTGGAACCGAATTCAGAGAAAGCGATTCACCGAAAAGGAAATGACCAATTGCCTGAGTTTCCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253812.8 ENST00000619750.1 |
||